BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005161
(711 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65567|PP342_ARATH Pentatricopeptide repeat-containing protein At4g30825,
chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2
SV=2
Length = 904
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/696 (69%), Positives = 594/696 (85%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
++Q+FNT+IYAC K+G V+L +KWFHMMLE V+PNVAT GMLMGLY+K+WNVEEAEFAF
Sbjct: 209 SYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAF 268
Query: 74 NQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQG 133
+ MRK G+VCESAYS+MITIYTRL LY+KAEEVI L+++D+V LENWLVMLNAYSQQG
Sbjct: 269 SHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQG 328
Query: 134 KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYR 193
K+E AE +LVSM AGFSPNI+AYNTL+TGYGK+ MEAAQ LF + ++GLEPDET+YR
Sbjct: 329 KMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYR 388
Query: 194 SMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
SMIEGWGRA NY EAK YY+ELK GYKPN+ NL+TLINL AKY D +GA+ T++DM +
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI 448
Query: 254 GCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAM 313
GCQ+SSILG +LQAYEK G+ D VP +LKGS + H+ N TS S LVMAYVKHG++DD +
Sbjct: 449 GCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCL 508
Query: 314 KVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTY 373
+L +K+W+D+ FE +LYHLLICSCK+SG L +AVKIY+H D + NLHI TMID Y
Sbjct: 509 GLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIY 568
Query: 374 SVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPD 433
+VMG F+EAEKLYLNLKSSG+ LD I F++VVRMYVKAGSL++AC+VLE M++QKDI PD
Sbjct: 569 TVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Query: 434 AYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFD 493
YL+ DMLRIYQ+C + DKL +LYY+I KSGI WNQE+Y+CVINCCARALP+DELS F+
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 494 EMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKN 553
EM+++GFTPN +T NV+LD+YGKAKLFK+V +LF +AK+ G+VDVISYNTIIAAYG+NK+
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKD 748
Query: 554 LESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNI 613
+MSS ++ MQFDGFSVSLEAYN++LDAYGK+ QME F+++L+RMK+++ DHYTYNI
Sbjct: 749 YTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 614 MIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENG 673
MI+IYGEQGWI+EV VL ELKE GL PDLCSYNTLIKAYGI GMVE+AVGLVKEMR
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 674 IEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
I PDK+TYTN++TAL+RND+FLEAIKWSLWMKQ+G+
Sbjct: 869 IIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%)
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSM 529
++++ VI C + + S+ F ML+ G PN+ T+ +++ +Y K + FS
Sbjct: 211 QVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSH 270
Query: 530 AKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQM 589
+K G+V +Y+++I Y + + + + M+ D + LE + ML+AY ++G+M
Sbjct: 271 MRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 590 ENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTL 649
E +++L M+ + + YN +I YG+ + G+ L GL PD SY ++
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSM 390
Query: 650 IKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
I+ +G A E+A +E++ G +P+ +I + AIK M IG
Sbjct: 391 IEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGC 450
Query: 710 Q 710
Q
Sbjct: 451 Q 451
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G N +++N +I C + ++ + F M+ PN TF +L+ +Y K+ ++
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKV 718
Query: 70 EFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAY 129
F ++ G+V +Y+ +I Y + Y I+ ++ D +LE + +L+AY
Sbjct: 719 NELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAY 778
Query: 130 SQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDE 189
+ ++E+ +L M+++ P+ YN ++ YG+ ++ + +K+ GL PD
Sbjct: 779 GKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDL 838
Query: 190 TTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLI 231
+Y ++I+ +G G EA KE++ P+ L+
Sbjct: 839 CSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 124/629 (19%), Positives = 244/629 (38%), Gaps = 75/629 (11%)
Query: 86 AYSAMITIYTRLSLYEKAEEVIR-LIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVS 144
AYS ++ + R +++AE++I+ L + + + + ++ A +++G ++ A
Sbjct: 176 AYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHM 235
Query: 145 MREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGN 204
M E G PN+ LM Y K N+E A+ F ++ G+ E+ Y SMI + R
Sbjct: 236 MLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVC-ESAYSSMITIYTRLRL 294
Query: 205 YREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GT 263
Y +A+ +K + N ++N +++ E A + L M G + I T
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNT 354
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKD 323
L+ Y K I K Q + L C+I GL D
Sbjct: 355 LITGYGK---------IFKMEAAQGLFHRL--CNI--------GLEPD------------ 383
Query: 324 TVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAE 383
+ Y +I + + A Y + C KPN + T+I+ + G A
Sbjct: 384 ----ETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 384 KLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRI 443
K ++ G + I ++++ Y K G + VL+ I + + ++
Sbjct: 440 KTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKG-SFHNHIRLNQTSFSSLVMA 497
Query: 444 YQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPN 503
Y + GM+D L + + LY +I C + + + ++++ ++ N
Sbjct: 498 YVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEIN 557
Query: 504 IITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQ 562
+ + M+DIY F KL+ K G+V D I ++ ++ Y + +LE S ++
Sbjct: 558 LHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
M ++ D Y + M+ IY +
Sbjct: 618 IMD----------------------------------EQKDIVPDVYLFRDMLRIYQKCD 643
Query: 623 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYT 682
+++ + +++ G+ + YN +I A +++ G +EM G P+ +T+
Sbjct: 644 LQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFN 703
Query: 683 NMITALQRNDKFLEAIKWSLWMKQIGLQD 711
++ + F + + L K+ G+ D
Sbjct: 704 VLLDVYGKAKLFKKVNELFLLAKRHGVVD 732
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/640 (23%), Positives = 295/640 (46%), Gaps = 22/640 (3%)
Query: 84 ESAYSAMITIYTRLSLYEKAEEVIR----LIREDKVVPNLENWLV--MLNAYSQQGKLEE 137
ES S ++ L ++K + +R +++ L+N +V +++ ++G++
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 191
Query: 138 AELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE 197
A + ++E GFS ++ +Y +L++ + A +F +++ G +P TY ++
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 198 GWGRAGN-YREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
+G+ G + + +++K G P+A TLI + + A ++M G
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 257 HSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV 315
+ + LL Y K+ R ++L + ++ + + L+ AY + G++D+AM++
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 316 ---LGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDT 372
+ +K K VF Y L+ + +G + +A+ I+ M KPN+ I
Sbjct: 372 KNQMAEKGTKPDVF---TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 373 YSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEP 432
Y G FTE K++ + G+ D++ + ++ ++ + G + V + M K+ P
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVP 487
Query: 433 DAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVF 492
+ + ++ Y +CG ++ +Y ++L +G+T + Y+ V+ AR ++ +V
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 493 DEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKL--GLVD--VISYNTIIAAY 548
EM PN +T +L Y K + + S+A+++ G+++ + T++
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGK---EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 549 GQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDH 608
+ L E++ GFS + NSM+ YG+ + VL MKE T
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 609 YTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKE 668
TYN ++ ++ + +L E+ G++PD+ SYNT+I AY + DA + E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 669 MRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIG 708
MR +GI PD ITY I + + F EAI +M + G
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/638 (21%), Positives = 284/638 (44%), Gaps = 5/638 (0%)
Query: 37 WFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYT 95
WF + + + +++ + K V A FN +++ G + +Y+++I+ +
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 96 RLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVS-MREAGFSPNI 154
Y +A V + + ED P L + V+LN + + G LV M+ G +P+
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 155 VAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKE 214
YNTL+T + S + A ++F +K G D+ TY ++++ +G++ +EA E
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 215 LKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGR 273
+ G+ P+ +LI+ +A+ + A+ + M G + TLL +E+AG+
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 274 TDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHL 333
++ I + N+ + + + Y G + MK+ + + ++
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 334 LICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSG 393
L+ +G + ++ M P T+I YS G F +A +Y + +G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 394 IRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKL 453
+ DL + V+ + G + + VL ME + +P+ YC +L Y + +
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR-CKPNELTYCSLLHAYANGKEIGLM 578
Query: 454 SYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDI 513
L ++ I L ++ C++ + E R F E+ + GF+P+I TLN M+ I
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 514 YGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVS 572
YG+ ++ + + K+ G + +YN+++ + ++ + ++E+ G
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 573 LEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLT 632
+ +YN+++ AY + +M + + M+ + D TYN I Y E +GV+
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 633 ELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMR 670
+ + G RP+ +YN+++ Y ++A V+++R
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 222/446 (49%), Gaps = 12/446 (2%)
Query: 253 MGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVK----HGL 308
+ Q +L +L++ +G+ D+V L++ S S ++A++K H
Sbjct: 95 LSPQGQQVLRSLIEPNFDSGQLDSV----LSELFEPFKDKPESTSSELLAFLKGLGFHKK 150
Query: 309 IDDAMKVLG---DKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHI 365
D A++ ++ ++ ++++ ++I G +++A +++ + +++
Sbjct: 151 FDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYS 210
Query: 366 MCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETME 425
++I ++ G + EA ++ ++ G + LI + V++ ++ K G+ + L
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 426 KQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPI 485
K I PDAY Y ++ ++ + + + ++ ++ +G ++++ Y+ +++ ++
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 486 DELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTI 544
E +V +EM+ +GF+P+I+T N ++ Y + + +L + MA+K DV +Y T+
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 545 IAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSC 604
++ + + +ES S +EM+ G ++ +N+ + YG G+ + +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 605 TFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVG 664
+ D T+N ++ ++G+ G +EV GV E+K G P+ ++NTLI AY G E A+
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 665 LVKEMRENGIEPDKITYTNMITALQR 690
+ + M + G+ PD TY ++ AL R
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALAR 536
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 225/535 (42%), Gaps = 41/535 (7%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+NTLI C + + A+ F M + T+ L+ +Y KS +EA N+M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 78 KLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
G Y+++I+ Y R + ++A E+ + E P++ + +L+ + + GK+E
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMI 196
A + MR AG PNI +N + YG ++F I GL PD T+ +++
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
+G+ G E +KE+K G+ P TLI+ +++ E A+ ML+ G
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 257 HS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFN-LTSCSILVMAYVKHGLIDDAMK 314
S T+L A + G + ++L N LT CS+L AY I
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL-HAYANGKEI----- 575
Query: 315 VLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYS 374
L H L A ++YS + +P ++ T++ S
Sbjct: 576 --------------GLMHSL------------AEEVYSGVI----EPRAVLLKTLVLVCS 605
Query: 375 VMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDA 434
+ EAE+ + LK G D+ +V +Y + + A VL+ M K++ P
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM-KERGFTPSM 664
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDE 494
Y ++ ++ + K + +IL GI + Y+ VI R + + SR+F E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 495 MLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAY 548
M G P++IT N + Y +F+ + K G + +YN+I+ Y
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 174/386 (45%), Gaps = 6/386 (1%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G K N FN I RG K F + C + P++ T+ L+ ++ ++ E
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 70 EFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
F +M++ G V E ++ +I+ Y+R +E+A V R + + V P+L + +L A
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
++ G E++E VL M + PN + Y +L+ Y + L + +EP
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
++++ + EA+ + ELK G+ P+ + L ++++++ + + A LD
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 249 DMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
M G S + +L+ + ++ IL+ L + + ++ S + ++ AY ++
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT 713
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHM--HICDGKPNLHI 365
+ DA ++ + R V + Y+ I S A+ + +M H C +PN +
Sbjct: 714 RMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC--RPNQNT 771
Query: 366 MCTMIDTYSVMGMFTEAEKLYLNLKS 391
+++D Y + EA+ +L++
Sbjct: 772 YNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 108/209 (51%), Gaps = 1/209 (0%)
Query: 46 VQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAE 104
++P L+ + K + EAE AF+++++ G + + ++M++IY R + KA
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 105 EVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGY 164
V+ ++E P++ + ++ +S+ ++E +L + G P+I++YNT++ Y
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 165 GKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNA 224
+ + M A R+F +++ G+ PD TY + I + + EA + + G +PN
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 225 SNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
+ ++++ + K ++ A ++D+ N+
Sbjct: 770 NTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 144/617 (23%), Positives = 280/617 (45%), Gaps = 10/617 (1%)
Query: 90 MITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAG 149
+ I R S Y A +++ I + + ++ + +L+AYS+ GK E+A + M+E G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 150 FSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKD----VGLEPDETTYRSMIEGWGRAGNY 205
SP +V YN ++ +GK M + R L + D GL+ DE T +++ R G
Sbjct: 241 PSPTLVTYNVILDVFGK---MGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLL 297
Query: 206 REAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTL 264
REAK ++ ELK GY+P L+ + K A++ L +M C S+ L
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
+ AY +AG + +++ + V+ N + + ++ AY K G D+A+K+ +
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 325 VFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
V Y+ ++ +K+ M PN TM+ GM +
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
++ +KS G D F ++ Y + GS DA + M + Y +L
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNAL 536
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
+ G + + G + Y ++ C A+ + R+ + + + P+
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 505 ITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQE 563
+ L +L K + + F++ KK G D++ +N++++ + +N + ++
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 564 MQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGW 623
++ DG S L YNS++D Y + G+ + +L+ ++++ D +YN +I + +G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 624 INEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTN 683
+ E V +L+E+ E G+RP + +YNT + Y GM + +++ M +N P+++T+
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 684 MITALQRNDKFLEAIKW 700
++ R K+ EA+ +
Sbjct: 777 VVDGYCRAGKYSEAMDF 793
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 247/536 (46%), Gaps = 23/536 (4%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
S G K + +T++ AC + G + ++F + C +P T+ L+ ++ K+
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 68 EAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
EA +M + +S Y+ ++ Y R ++A VI ++ + V+PN + ++
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
+AY + GK +EA + SM+EAG PN YN +++ GK S ++ +K G
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNT 246
P+ T+ +M+ G G + ++E+K G++P+ TLI+ + + E A
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 247 LDDMLNMGCQHS-SILGTLLQAYEKAG---RTDNVPRILKGSLYQHVLFNLTSCSILVMA 302
+M G + LL A + G +NV +K ++ TS S+++
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT---ETSYSLMLQC 570
Query: 303 YVKHGLIDDAMKVLGDKRWKDTVFEDNLYH-------LLICSCKDSGHLANAVKIYSHMH 355
Y K G LG +R ++ + E ++ LL+ + K LA + + ++
Sbjct: 571 YAKGG------NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA-LAGSERAFTLFK 623
Query: 356 ICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLK 415
KP++ I +M+ ++ M+ +AE + +++ G+ DL+ + ++ MYV+ G
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCV 475
A +L+T+EK + ++PD Y +++ + + G++ + + ++ + GI Y+
Sbjct: 684 KAEEILKTLEKSQ-LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTF 742
Query: 476 INCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAK 531
++ E+ V + M ++ PN +T +++D Y +A + S K
Sbjct: 743 VSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 192/402 (47%), Gaps = 10/402 (2%)
Query: 317 GDKRWKDTVFEDNLYHLLICSCK---DSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTY 373
G R+ D+V + L L+ K DSGH AV ++ + + L + +I+ +
Sbjct: 122 GLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIF 181
Query: 374 -SVMG---MFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKD 429
++G ++ A KL + LD+ A+T ++ Y + G + A + E M K+
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM-KEMG 240
Query: 430 IEPDAYLYCDMLRIYQQCGM-LDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDEL 488
P Y +L ++ + G K+ + ++ G+ +++ V++ CAR + E
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 489 SRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTIIAA 547
F E+ G+ P +T N +L ++GKA ++ + M + D ++YN ++AA
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Query: 548 YGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFD 607
Y + + + ++ M G + Y +++DAYGK G+ + + MKE C +
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 608 HYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVK 667
TYN ++ + G++ NE++ +L ++K G P+ ++NT++ G GM + + +
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 668 EMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
EM+ G EPD+ T+ +I+A R ++A K M + G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/520 (21%), Positives = 219/520 (42%), Gaps = 73/520 (14%)
Query: 263 TLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLI-DDAMKVLGDKRW 321
T+L AY + G+ + + + L + ++++ + K G + VL + R
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 322 KDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTE 381
K F++ ++ +C G L A + ++ + C +P ++ + G++TE
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A + ++ + D + + +V YV+AG K+A V+E M K K + P+A Y ++
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK-KGVMPNAITYTTVI 393
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
Y + G D+ L+Y + ++G N Y+ V++ + +E+ ++ +M +G +
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQ---------- 550
PN T N ML + G + K V ++F K G D ++NT+I+AYG+
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 551 -------------------------NKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGK 585
+ S + + +M+ GF + +Y+ ML Y K
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 586 EGQMENFKNVLRRMKE-------------------------TSCTF----------DHYT 610
G + + R+KE + F D
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 611 YNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMR 670
+N M+ I+ ++ G+L ++E GL PDL +YN+L+ Y G A ++K +
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 671 ENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
++ ++PD ++Y +I R EA++ M + G++
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 156/703 (22%), Positives = 307/703 (43%), Gaps = 46/703 (6%)
Query: 48 PNVAT-FGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEV 106
P+V T M++G K + + E MRK A+SA T+ S ++ +
Sbjct: 131 PSVNTCIEMVLGCVKAN-KLREGYDVVQMMRKFKF--RPAFSAYTTLIGAFSAVNHSDMM 187
Query: 107 IRLIREDKVV---PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTG 163
+ L ++ + + P + + ++ ++++G+++ A +L M+ + +IV YN +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 164 YGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE-------------------------- 197
+GKV ++ A + F I+ GL+PDE TY SMI
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 198 ---------GWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
G+G AG + EA + + G P+ ++ K + A+ +
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 249 DMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLF-NLTSCSILVMAYVKHG 307
+M + S L+ +AG+ D L+ S+ + LF N+ + +I+V K
Sbjct: 368 EMKKDAAPNLSTYNILIDMLCRAGKLDTAFE-LRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
+D+A + + +K ++ + LI G + +A K+Y M D + N +
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQ 427
++I + G + K+Y ++ + DL + KAG + A+ E ++ +
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 428 KDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDE 487
+ + PDA Y ++ + G ++ L+Y + + G + Y+ VI+ + +++
Sbjct: 547 RFV-PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 488 LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIA 546
++ +EM GF P ++T ++D K LF AK + ++V+ Y+++I
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 547 AYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTF 606
+G+ ++ ++E+ G + +L +NS+LDA K ++ + MKE CT
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 607 DHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLV 666
+ TY I+I+ + N+ E+++ G++P SY T+I AG + +A L
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 667 KEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
+ NG PD Y MI L ++ ++A ++ GL
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 155/703 (22%), Positives = 281/703 (39%), Gaps = 40/703 (5%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
LG + LF TLI K G V+ M + ++ + + + + K V+
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 69 AEFAFNQMRKLGLVC-ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
A F+++ GL E Y++MI + + + ++A E+ + +++ VP + M+
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
Y GK +EA +L R G P+++AYN ++T K+ ++ A ++F +K P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAP 375
Query: 188 DETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTL 247
+ +TY +I+ RAG A ++ G PN + +++ K + + A
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 248 DDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKH 306
++M C I +L+ K GR D+ ++ + L N + L+ + H
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 307 GLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIM 366
G +D K+ D ++ + L + + +G ++ + P+
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 367 CTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK 426
+I G E +L+ ++K G LD A+ +V+ + K G + A +LE M K
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-K 614
Query: 427 QKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPID 486
K EP Y ++ + LD+ L+ + I N +Y +I+ + ID
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 487 ELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTII 545
E + +E++Q G TPN+ T N +LD KA+ F K+L + ++Y +I
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 546 AAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCT 605
+ + QEMQ G S +Y +M+ K G + E
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN----------IAEAGAL 784
Query: 606 FDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGL 665
FD + N G PD YN +I+ DA L
Sbjct: 785 FDRFKAN-------------------------GGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 666 VKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIG 708
+E R G+ T ++ L +ND +A +++ G
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/613 (20%), Positives = 238/613 (38%), Gaps = 142/613 (23%)
Query: 156 AYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKEL 215
+YN+L+ + N +A ++ + G P T M+ G +A RE + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 216 KHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTD 275
+ ++P S TLI + AVN HS ++ TL Q ++ G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFS-------AVN-----------HSDMMLTLFQQMQELGYEP 201
Query: 276 NVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI 335
V H+ + L+ + K G +D A+ +L + +
Sbjct: 202 TV----------HLF------TTLIRGFAKEGRVDSALSLLDEMK--------------- 230
Query: 336 CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
S L + +Y ++C ID++ +G A K + ++++G++
Sbjct: 231 -----SSSLDADIVLY---NVC------------IDSFGKVGKVDMAWKFFHEIEANGLK 270
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
D + +T ++ + KA L +A + E +EK + + P Y Y M+ Y G D+
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG 515
L + G + Y+C++ C + +DE +VF+EM + PN+ T N+++D+
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 516 KAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE 574
+A +L +K GL +V + N ++ +++ L+ + +EM + +
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG-----------W 623
+ S++D GK G++++ V +M ++ C + Y +I + G
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 624 INEVV------------------------GVLTELKECGLRPDLCSYNTLI--------- 650
IN+ + E+K PD SY+ LI
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 651 -------------------KAYGIA-------GMVEDAVGLVKEMRENGIEPDKITYTNM 684
+AY I G V A L++EM+ G EP +TY ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 685 ITALQRNDKFLEA 697
I L + D+ EA
Sbjct: 629 IDGLAKIDRLDEA 641
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSM 529
E Y+ ++ AR D L ++ EM GF P++ T M+ KA + + M
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 530 AKKLGLVDVIS-YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ 588
+K S Y T+I A+ + + M + Q+MQ G+ ++ + +++ + KEG+
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 589 MENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPD------ 642
+++ ++L MK +S D YN+ ID +G+ G ++ E++ GL+PD
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 643 ----LC-------------------------SYNTLIKAYGIAGMVEDAVGLVKEMRENG 673
LC +YNT+I YG AG ++A L++ R G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 674 IEPDKITYTNMITALQRNDKFLEAIKWSLWMKQ 706
P I Y ++T L++ K EA+K MK+
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 180/439 (41%), Gaps = 7/439 (1%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
M A N +N LI + G ++ + M + + PNV T +++ KS +
Sbjct: 369 MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 67 EEAEFAFNQMR-KLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
+EA F +M K+ E + ++I ++ + A +V + + N + +
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 126 LNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGL 185
+ + G+ E+ + M SP++ NT M K E + +F IK
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVN 245
PD +Y +I G +AG E + +K G + +I+ K A
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 246 TLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYV 304
L++M G + + + G+++ K R D + + + + + N+ S L+ +
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 305 KHGLIDDAMKVLGDKRWKDTVFEDNLY--HLLICSCKDSGHLANAVKIYSHMHICDGKPN 362
K G ID+A +L + K NLY + L+ + + + A+ + M PN
Sbjct: 669 KVGRIDEAYLILEELMQKG--LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 363 LHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLE 422
+I+ + F +A + ++ G++ I++T ++ KAG++ +A A+ +
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 423 TMEKQKDIEPDAYLYCDML 441
+ + PD+ Y M+
Sbjct: 787 RFKANGGV-PDSACYNAMI 804
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
M+ E S +LN ++++LI K G ++ +++ + PN+ T+ L+
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 61 KKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLE 120
K+ + EA F M++L K PN
Sbjct: 703 VKAEEINEALVCFQSMKEL----------------------------------KCTPNQV 728
Query: 121 NWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSI 180
+ +++N + K +A + M++ G P+ ++Y T+++G K N+ A LF
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 181 KDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDE 240
K G PD Y +MIEG +A ++E + G + +H K
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG-----------LPIHNKT--- 834
Query: 241 EGAVNTLDDMLNMGC-QHSSILGTLLQAYEKA 271
V LD + C + ++I+G +L+ KA
Sbjct: 835 --CVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 166/686 (24%), Positives = 316/686 (46%), Gaps = 22/686 (3%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
N +NTLI + ++ + F M V+P T+ + + Y KS + A F
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 74 NQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQ 132
+M+ G+ A +A + + +A+++ +++ +VP+ + +M+ YS+
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
G+++EA +L M E G P+++ N+L+ K ++ A ++F+ +K++ L+P TY
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 193 RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLN 252
+++ G G+ G +EA ++ + G PN TL + K ++ A+ L M++
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 253 MGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDD 311
MGC T++ K G+ + + V + + L+ VK LI+D
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 312 AMKVLGDKRWKDTVFEDNLY-HLLICSCKDSGHLANAVKIYSHM---HIC-DGK----PN 362
A K++ + + NL+ LI S + NAV + IC DG P
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 363 LHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLE 422
+ C +V G T EK +L G++ L + +++ ++A ++ A V
Sbjct: 756 IRYSCKH---NNVSGARTLFEKFTKDL---GVQPKLPTYNLLIGGLLEADMIEIAQDVFL 809
Query: 423 TMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARA 482
++ I PD Y +L Y + G +D+L LY ++ N ++ VI+ +A
Sbjct: 810 QVKSTGCI-PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 483 LPIDE-LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVIS 540
+D+ L +D M F+P T ++D K+ ++LF G +
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
YN +I +G+ ++ + + M +G L+ Y+ ++D G+++ + + +K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKEC-GLRPDLCSYNTLIKAYGIAGMV 659
E+ D YN++I+ G+ + E + + E+K G+ PDL +YN+LI GIAGMV
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 660 EDAVGLVKEMRENGIEPDKITYTNMI 685
E+A + E++ G+EP+ T+ +I
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 148/661 (22%), Positives = 289/661 (43%), Gaps = 15/661 (2%)
Query: 48 PNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEV 106
P+V TF +L+ K+ N EA + MR G++ Y+ +I R+ + A E+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 107 IRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGK 166
+ V P ++V ++ Y + G A M+ G +PNIVA N + K
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 167 VSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASN 226
A+++F +KD+GL PD TY M++ + + G EA E+ G +P+
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 227 LYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSL 285
+ +LIN K + + A M M + + + TLL K G+ + +G +
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 286 YQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLA 345
+ N + + L K+ + A+K+L V + Y+ +I +G +
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660
Query: 346 NAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNL--KSSGIRLDLIAFTV 403
A+ + M P+ +CT++ + +A K+ N + +L +
Sbjct: 661 EAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 404 VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS 463
+ + +AG + +A + E + + ++R + + L+ K K
Sbjct: 720 IGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 464 -GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKR 522
G+ Y+ +I A I+ VF ++ G P++ T N +LD YGK+ +
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG---K 835
Query: 523 VRKLFSMAKKLGL----VDVISYNTIIAAYGQNKNLESMSSTVQEMQFD-GFSVSLEAYN 577
+ +LF + K++ + I++N +I+ + N++ ++ D FS + Y
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 578 SMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKEC 637
++D K G++ K + M + C + YNI+I+ +G+ G + + + +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 638 GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
G+RPDL +Y+ L+ + G V++ + KE++E+G+ PD + Y +I L ++ + EA
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 698 I 698
+
Sbjct: 1016 L 1016
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 166/760 (21%), Positives = 317/760 (41%), Gaps = 74/760 (9%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
+LG K N F I + G + + M + P+V T+ +L+ + ++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 68 EAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRL---IREDKVVPNLENWLV 124
A+ F +M K G + IT+ R S + V + + +D VP++ + +
Sbjct: 311 CAKEVFEKM-KTGRH-KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 125 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
+++A + G EA L MR+ G PN+ YNTL+ G +V ++ A LF +++ +G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNA----SNLYTLINLHAKYEDE 240
++P TY I+ +G++G+ A ++++K G PN ++LY+L AK +
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL----AKAGRD 484
Query: 241 EGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSIL 299
A + ++G S+ +++ Y K G D ++L + ++ + L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 300 VMAYVKHGLIDDAMKV---LGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHI 356
+ K +D+A K+ + + + K TV Y+ L+ +G + A++++ M
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVT---YNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 357 CDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKD 416
PN T+ D T A K+ + G D+ + ++ VK G +K+
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 417 ACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELY--DC 474
A M+K + PD C +L + +++ + L + L+ D
Sbjct: 662 AMCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVML--------DIYGKAKLFKRVRKL 526
+ + A A ID + ++ +G + ++ V + ++ G LF++ K
Sbjct: 720 IGSILAEA-GIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 527 FSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKE 586
+ KL +YN +I + +E +++ G + YN +LDAYGK
Sbjct: 779 LGVQPKLP-----TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833
Query: 587 GQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVV------------------ 628
G+++ + + M C + T+NI+I + G +++ +
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 629 -----------GVLTELKEC-------GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMR 670
G L E K+ G RP+ YN LI +G AG + A L K M
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 671 ENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
+ G+ PD TY+ ++ L + E + + +K+ GL
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 145/651 (22%), Positives = 275/651 (42%), Gaps = 63/651 (9%)
Query: 66 VEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSL---YEKAEEVIRLIREDKVVPNLENW 122
+EE + F+ M+K + + + +TI+ LS+ ++A +R +RE +
Sbjct: 134 LEEMAYVFDLMQKR--IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE---------F 182
Query: 123 LVMLNAYSQQGKLE---------EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAA 173
+LNAYS G + EA V M GF P++ Y++LM G GK ++++
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 174 QRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINL 233
L ++ +GL+P+ T+ I GRAG EA K + G P+ LI+
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 234 HAKYEDEEGAVNTLDDMLNMGCQHSSILG-TLLQAYEKAGRTDNVPRILKGSLYQHVLFN 292
+ A + M + + TLL + D+V + + +
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Query: 293 LTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYS 352
+ + +ILV A K G +A L R + + + Y+ LIC L +A++++
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 353 HMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAG 412
+M KP + ID Y G A + + +K+ GI +++A + KAG
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 413 SLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELY 472
++A + + K + PD+ Y M++ Y + G
Sbjct: 483 RDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVG------------------------ 517
Query: 473 DCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKK 532
IDE ++ EM+++G P++I +N +++ KA K+F K+
Sbjct: 518 -----------EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 533 LGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMEN 591
+ L V++YNT++A G+N ++ + M G + +N++ D K ++
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 592 FKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIK 651
+L +M + C D +TYN +I + G + E + ++K+ + PD + TL+
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLP 685
Query: 652 AYGIAGMVEDAVGLVKEMREN-GIEPDKITYTNMITALQRNDKFLEAIKWS 701
A ++EDA ++ N +P + + ++I ++ A+ +S
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 238/535 (44%), Gaps = 15/535 (2%)
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAV 244
++ D TY ++ + G ++A + ++++ G+ NA + LI+L K A+
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 245 NTLDDMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
M+ G + S +L+ K D+V +LK + N+ + +I +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNL--YHLLICSCKDSGHLANAVKIYSHMHICDGKP 361
+ G I++A ++L KR D ++ Y +LI + + L A +++ M KP
Sbjct: 269 GRAGKINEAYEIL--KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 362 NLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVL 421
+ T++D +S ++ + ++ G D++ FT++V KAG+ +A L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 422 ETMEKQKDIEPDAYLY----CDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVIN 477
+ M Q I P+ + Y C +LR+++ LD L+ + G+ Y I+
Sbjct: 387 DVMRDQ-GILPNLHTYNTLICGLLRVHR----LDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 478 CCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV- 536
++ F++M G PNI+ N L KA + +++F K +GLV
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 537 DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVL 596
D ++YN ++ Y + ++ + EM +G + NS+++ K +++ +
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 597 RRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIA 656
RMKE TYN ++ G+ G I E + + + + G P+ ++NTL
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 657 GMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQD 711
V A+ ++ +M + G PD TY +I L +N + EA+ + MK++ D
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 676
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/542 (21%), Positives = 213/542 (39%), Gaps = 85/542 (15%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G N FNTL K V L K M++ P+V T+ ++ K+ V+EA
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 70 EFAFNQMRKL-------------GLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKV- 115
F+QM+KL G+V S I T LY A++ L ED +
Sbjct: 663 MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIG 721
Query: 116 ----VPNLENWLVMLNAYSQQGKLEEAELVLVSM---------------------REAGF 150
++N + G + + +LV + ++ G
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 151 SPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKW 210
P + YN L+ G + +E AQ +FL +K G PD TY +++ +G++G E
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 211 YYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLN------MGCQHSSILGTL 264
YKE+ + N +I+ K + + A++ D+++ C + G L
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY----GPL 897
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
+ K+GR ++ +G L N C+I
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPN---CAI-------------------------- 928
Query: 325 VFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
Y++LI +G A ++ M +P+L ++D ++G E
Sbjct: 929 ------YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
+ LK SG+ D++ + +++ K+ L++A + M+ + I PD Y Y ++
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
GM+++ +Y +I ++G+ N ++ +I + + + V+ M+ GF+PN
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Query: 505 IT 506
T
Sbjct: 1103 GT 1104
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 106/217 (48%), Gaps = 2/217 (0%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+ LI +K G + + F ML+ +PN A + +L+ + K+ + A F +M
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 78 KLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
K G+ + YS ++ + ++ + ++E + P++ + +++N + +LE
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 137 EAELVLVSMREA-GFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSM 195
EA ++ M+ + G +P++ YN+L+ G +E A +++ I+ GLEP+ T+ ++
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 196 IEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLIN 232
I G+ +G A Y+ + G+ PN L N
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 528 SMAKKLGLVDVI-SYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKE 586
S+A L LV + N ++ A + LE M+ MQ Y ++ + +
Sbjct: 107 SVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVK 166
Query: 587 GQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSY 646
G ++ LR+M+E + Y+YN +I + + + E + V + G RP L +Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 647 NTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
++L+ G ++ +GL+KEM G++P+ T+T I L R K EA
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
+ E++ S G + +N+LI G VE K ++ + ++PNV TF L+ Y
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 61 KKSWNVEEAEFAFNQM 76
S E A + M
Sbjct: 1078 SLSGKPEHAYAVYQTM 1093
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 264/587 (44%), Gaps = 28/587 (4%)
Query: 90 MITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAG 149
++T R + ++K E ++ + V P++ + +NA+ + GK+EEA + M EAG
Sbjct: 245 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303
Query: 150 FSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAK 209
+PN+V +NT++ G G + A + + G+EP TY +++G RA +A
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 210 WYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ-HSSILGTLLQAY 268
+ KE+ G+ PN LI+ + A+ D M++ G SS TL++ Y
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 269 EKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFED 328
K G+ DN R+LK L N S + ++ H + D A++ +G+ ++
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483
Query: 329 NLYHLLICSCKDSGHLANAVKIYSHM----HICDGKPN---LHIMCTMIDTYSVMGMFTE 381
L LI G + A++++ + D + + LH +C G E
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE-------AGKLDE 536
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A ++ + G +D +++ ++ L +A L+ M K + ++PD Y Y ++
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYSILI 595
Query: 442 RIYQQCGM-----LDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEML 496
CG+ +++ + ++G+ + Y +I+ C +A +E FDEM+
Sbjct: 596 -----CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 497 QHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLE 555
PN + N ++ Y ++ +L K G+ + +Y ++I +E
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 556 SMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMI 615
+EM+ +G ++ Y +++D YGK GQM + +LR M + + TY +MI
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Query: 616 DIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDA 662
Y G + E +L E++E G+ PD +Y I Y G V +A
Sbjct: 771 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 137/592 (23%), Positives = 247/592 (41%), Gaps = 48/592 (8%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + LF T I A K G VE K F M E V PNV TF ++ +EA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 70 EFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAY 129
F F + + E+ E P L + +++
Sbjct: 328 -FMFKE----------------------KMVERGME-----------PTLITYSILVKGL 353
Query: 130 SQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV----GL 185
++ ++ +A VL M + GF PN++ YN L+ + + ++ A + IKD+ GL
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA----IEIKDLMVSKGL 409
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVN 245
+TY ++I+G+ + G A+ KE+ +G+ N + ++I L + + A+
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 246 TLDDML--NMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
+ +ML NM +L TL+ K G+ + L + + + + + L+
Sbjct: 470 FVGEMLLRNMS-PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNL 363
+ G +D+A ++ + + V + Y+ LI C L A M KP+
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588
Query: 364 HIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLET 423
+ +I M EA + + + K +G+ D+ ++V++ KA ++ +
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648
Query: 424 MEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARAL 483
M K+++P+ +Y ++R Y + G L L + GI+ N Y +I +
Sbjct: 649 M-MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 707
Query: 484 PIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLF-SMAKKLGLVDVISYN 542
++E +F+EM G PN+ ++D YGK +V L M K + I+Y
Sbjct: 708 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 543 TIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ-MENFK 593
+I Y ++ N+ S + EM+ G Y + Y K+G +E FK
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 15/279 (5%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLM-GLYKKSWNVEEAEFAFNQM 76
+NTLI C + ++ + M++ ++P+ T+ +L+ GL+ + VEEA ++
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN-KVEEAIQFWDDC 614
Query: 77 RKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKL 135
++ G++ + YS MI + E+ +E + V PN + ++ AY + G+L
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 674
Query: 136 EEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSM 195
A + M+ G SPN Y +L+ G +S +E A+ LF ++ GLEP+ Y ++
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734
Query: 196 IEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGC 255
I+G+G+ G + + +E+ PN +I +A+ + A L++M G
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Query: 256 QHSSIL-----------GTLLQAYEKAGRTDNVPRILKG 283
SI G +L+A+ K +N I++G
Sbjct: 795 VPDSITYKEFIYGYLKQGGVLEAF-KGSDEENYAAIIEG 832
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 188/488 (38%), Gaps = 73/488 (14%)
Query: 294 TSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSH 353
T+C+IL+ + V+ + D K + L+ I + G + AVK++S
Sbjct: 240 TTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 298
Query: 354 MHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGS 413
M PN+ T+ID + G + EA + G+ LI ++++V+ +A
Sbjct: 299 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 414 LKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDK---------------LSYLYY 458
+ DA VL+ M K K P+ +Y +++ + + G L+K S Y
Sbjct: 359 IGDAYFVLKEMTK-KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 459 KILKS--------------------GITWNQELYDCVINCCARALPIDELSRVFDEMLQH 498
++K G NQ + VI L D R EML
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 499 GFTPN---IITLNVMLDIYGKAKL-----FKRVRKLFSM--------------AKKLG-- 534
+P + TL L +GK F+ + K F + A KL
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 535 ------------LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDA 582
++D +SYNT+I+ K L+ + EM G Y+ ++
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597
Query: 583 YGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPD 642
++E K D YTY++MID + E E+ ++P+
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 643 LCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSL 702
YN LI+AY +G + A+ L ++M+ GI P+ TYT++I + + EA
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 703 WMKQIGLQ 710
M+ GL+
Sbjct: 718 EMRMEGLE 725
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 179/456 (39%), Gaps = 45/456 (9%)
Query: 2 IREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYK 61
I+++ +S G L +NTLI K G + + ML N +F ++ L
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 62 KSWNVEEA-----EFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV 116
+ A E M G + +I+ + + KA E+ V
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGG----GLLTTLISGLCKHGKHSKALELWFQFLNKGFV 515
Query: 117 PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRL 176
+ +L+ + GKL+EA + + G + V+YNTL++G ++ A
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 177 FLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK 236
+ GL+PD TY +I G EA ++ + K G P+ +I+ K
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 237 YEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSC 296
E E D+M++ Q +++ +Y H
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTV------------------------VYNH-------- 663
Query: 297 SILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHI 356
L+ AY + G + A+++ D + K Y LI + A ++ M +
Sbjct: 664 --LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721
Query: 357 CDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKD 416
+PN+ +ID Y +G + E L + S + + I +TV++ Y + G++ +
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781
Query: 417 ACAVLETMEKQKDIEPDAYLYCDMLRIY-QQCGMLD 451
A +L M ++K I PD+ Y + + Y +Q G+L+
Sbjct: 782 ASRLLNEM-REKGIVPDSITYKEFIYGYLKQGGVLE 816
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 237/512 (46%), Gaps = 14/512 (2%)
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKE--LKHLGYKPNASNLYTLINLHAKYEDEEGAVNT 246
E Y +I GR+ EA ++ L L Y LI A+ D E A+N
Sbjct: 167 ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYN-------ALIGACARNNDIEKALNL 219
Query: 247 LDDMLNMGCQHSSILGTL-LQAYEKAGRTDNVP--RILKGSLYQHVLFNLTSCSILVMAY 303
+ M G Q + +L +Q+ ++ + D+V R+ K + ++ + ++M +
Sbjct: 220 IAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGF 279
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNL 363
K G A+++LG + + +I + DSG A ++ + KP
Sbjct: 280 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 364 HIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLET 423
++ Y G +AE + ++ G+ D +++++ YV AG + A VL+
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 399
Query: 424 MEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARAL 483
ME D++P+++++ +L ++ G K + ++ G+ +++ Y+ VI+ +
Sbjct: 400 MEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Query: 484 PIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVD-VISYN 542
+D FD ML G P+ +T N ++D + K ++F ++ G + +YN
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518
Query: 543 TIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKET 602
+I +YG + + M + +M+ G ++ + +++D YGK G+ + L MK
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 603 SCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDA 662
YN +I+ Y ++G + V + GL+P L + N+LI A+G +A
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 663 VGLVKEMRENGIEPDKITYTNMITALQRNDKF 694
+++ M+ENG++PD +TYT ++ AL R DKF
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 186/416 (44%), Gaps = 4/416 (0%)
Query: 12 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEF 71
+L+ QL N +I K G + M + AT ++ S EAE
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 72 AFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYS 130
F ++R+ G+ + AY+A++ Y + + AE ++ + + V P+ + ++++AY
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
G+ E A +VL M PN ++ L+ G+ + ++ +K +G++PD
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
Y +I+ +G+ A + + G +P+ TLI+ H K+ A + M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 251 LNMGCQH-SSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLI 309
GC ++ ++ +Y R D++ R+L Q +L N+ + + LV Y K G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 310 DDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG-KPNLHIMCT 368
+DA++ L + + +Y+ LI + G AV + M DG KP+L + +
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM-TSDGLKPSLLALNS 624
Query: 369 MIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETM 424
+I+ + EA + +K +G++ D++ +T +++ ++ + V E M
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/531 (19%), Positives = 210/531 (39%), Gaps = 38/531 (7%)
Query: 87 YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLV--S 144
Y+A+I R + EKA +I +R+D + N+ +++ + ++ K++ L+ +
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 145 MREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGN 204
+ ++ N ++ G+ K + A +L + GL T S+I +G
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 205 YREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTL 264
EA+ ++EL+ G KP + L
Sbjct: 320 TLEAEALFEELRQSGIKP----------------------------------RTRAYNAL 345
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
L+ Y K G + ++ + V + + S+L+ AYV G + A VL + D
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 325 VFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
++ L+ +D G ++ M KP+ +IDT+ A
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
+ + S GI D + + ++ + K G A + E ME++ + P A Y M+ Y
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL-PCATTYNIMINSY 524
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
D + L K+ GI N + +++ ++ ++ +EM G P+
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 505 ITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQE 563
N +++ Y + L ++ F + GL +++ N++I A+G+++ + +Q
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 564 MQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIM 614
M+ +G + Y +++ A + + + V M + C D +++
Sbjct: 645 MKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 1/261 (0%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
S+G K + Q +N +I K C++ F ML ++P+ T+ L+ + K
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 68 EAEFAFNQMRKLG-LVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
AE F M + G L C + Y+ MI Y ++ + ++ ++ ++PN+ ++
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
+ Y + G+ +A L M+ G P+ YN L+ Y + E A F + GL+
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNT 246
P S+I +G EA + +K G KP+ TL+ + + +
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVV 676
Query: 247 LDDMLNMGCQHSSILGTLLQA 267
++M+ GC+ ++L++
Sbjct: 677 YEEMIMSGCKPDRKARSMLRS 697
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/599 (23%), Positives = 255/599 (42%), Gaps = 41/599 (6%)
Query: 49 NVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVI 107
N + F +L+ Y ++ + EA AF +R G V A +A+I R+ E A V
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 108 RLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKV 167
+ I V N+ +M+NA + GK+E+ L ++E G P+IV YNTL++ Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 168 SNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNL 227
ME A L ++ G P TY ++I G + G Y AK + E+ G P+++
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 228 YTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLY 286
+L+ K D DM + + +++ + ++G D
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 287 QHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLAN 346
++ + +IL+ Y + G+I AM + + + + Y+ ++ L
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 347 AVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVR 406
A K+++ M P+ + + +ID + +G A +L+ +K IRLD++ + ++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 407 MYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGIT 466
+ K G DI+ ++ DM+ +IL + I+
Sbjct: 524 GFGKVG----------------DIDTAKEIWADMVS---------------KEILPTPIS 552
Query: 467 WNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKL 526
Y ++N + E RV+DEM+ P ++ N M+ Y ++
Sbjct: 553 -----YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 527 FSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFD--GFSVSLEAYNSMLDAY 583
G V D ISYNT+I + + +N+ V++M+ + G + YNS+L +
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 584 GKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPD 642
++ QM+ + VLR+M E D TY MI+ + Q + E + E+ + G PD
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 224/497 (45%), Gaps = 3/497 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G +N N ++ A K G +E + + E V P++ T+ L+ Y +EEA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
N M G Y+ +I + YE+A+EV + + P+ + +L
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
++G + E E V MR P++V ++++M+ + + N++ A F S+K+ GL PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
Y +I+G+ R G A E+ G + T+++ K + A +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 249 DMLNMGC-QHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
+M S L L+ + K G N + + + + ++ + + L+ + K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
ID A ++ D K+ + Y +L+ + GHLA A +++ M + KP + I
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK- 426
+MI Y G ++ E + S G D I++ ++ +V+ ++ A +++ ME+
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 427 QKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPID 486
Q + PD + Y +L + + + + + K+++ G+ ++ Y C+IN +
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 487 ELSRVFDEMLQHGFTPN 503
E R+ DEMLQ GF+P+
Sbjct: 710 EAFRIHDEMLQRGFSPD 726
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 145/705 (20%), Positives = 294/705 (41%), Gaps = 139/705 (19%)
Query: 66 VEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEE-VIRLIRED-----KVVPNL 119
V++ F F + L + SAMI I R A+ ++R+IR ++V +L
Sbjct: 99 VDQLGFHFPNFKHTSL----SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSL 154
Query: 120 ENWL-----------VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVS 168
++ +++ Y Q KL EA +R GF+ +I A N L+ ++
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214
Query: 169 NMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLY 228
+E A WG Y+E+ G N
Sbjct: 215 WVELA-------------------------WG----------VYQEISRSGVGIN----- 234
Query: 229 TLINLHAKYEDEEGAVNTLDDMLNMGCQHSSI--LGTLLQAYEKAGRTDNVPRILKGSLY 286
V TL+ M+N C+ + +GT L ++ G
Sbjct: 235 ---------------VYTLNIMVNALCKDGKMEKVGTFLSQVQEKG-------------- 265
Query: 287 QHVLFNLTSCSILVMAYVKHGLIDDA---MKVLGDKRWKDTVFEDNLYHLLICSCKDSGH 343
V ++ + + L+ AY GL+++A M + K + V+ Y+ +I G
Sbjct: 266 --VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT---YNTVINGLCKHGK 320
Query: 344 LANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTV 403
A ++++ M P+ +++ G E EK++ +++S + DL+ F+
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 404 VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS 463
++ ++ ++G+L A ++ K+ + PD +Y +++ Y + GM+ L ++L+
Sbjct: 381 MMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRV 523
G + Y+ +++ + + E ++F+EM + P+ TL +++D + K +
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 524 RKLFS-MAKKLGLVDVISYNTIIAAYGQNKNLESMSS-----TVQEMQFDGFSVSL---- 573
+LF M +K +DV++YNT++ +G+ ++++ +E+ S S+
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 574 --------EAY------------------NSMLDAYGKEGQMENFKNVLRRMKETSCTFD 607
EA+ NSM+ Y + G + ++ L +M D
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 608 HYTYNIMIDIYGEQGWINEVVGVLTELKE--CGLRPDLCSYNTLIKAYGIAGMVEDAVGL 665
+YN +I + + +++ G++ +++E GL PD+ +YN+++ + +++A +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 666 VKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
+++M E G+ PD+ TYT MI D EA + M Q G
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 124/605 (20%), Positives = 243/605 (40%), Gaps = 54/605 (8%)
Query: 84 ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLV 143
+S + +I Y + +A E L+R +++ ++ + + G +E A V
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 144 SMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAG 203
+ +G N+ N ++ K ME +++ G+ PD TY ++I + G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 204 NYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMG-CQHSSILG 262
EA + G+ P T+IN K+ E A +ML G S+
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 263 TLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWK 322
+LL K G ++ + V+ +L S ++ + + G +D A+ +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 323 DTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTM-IDTYSVM----- 376
+ ++ +Y +LI G ++ A+ + + M L C M + TY+ +
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEM--------LQQGCAMDVVTYNTILHGLC 456
Query: 377 --GMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDA 434
M EA+KL+ + + D T+++ + K G+L++A + + M K+K I D
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDV 515
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDE 494
Y +L + + G +D ++ ++ I Y ++N + E RV+DE
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 495 MLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNL 554
M+ P ++ N M I Y ++ N
Sbjct: 576 MISKNIKPTVMICNSM----------------------------------IKGYCRSGNA 601
Query: 555 ESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTF--DHYTYN 612
S +++M +GF +YN+++ + +E M ++++M+E D +TYN
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 613 IMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMREN 672
++ + Q + E VL ++ E G+ PD +Y +I + + +A + EM +
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 673 GIEPD 677
G PD
Sbjct: 722 GFSPD 726
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
++ L+ A +G + + + M+ +++P V ++ Y +S N + E +M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 78 KLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDK--VVPNLENWLVMLNAYSQQGK 134
G V + +Y+ +I + R KA +++ + E++ +VP++ + +L+ + +Q +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 135 LEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDE 189
++EAE+VL M E G +P+ Y ++ G+ N+ A R+ + G PD+
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 162/683 (23%), Positives = 303/683 (44%), Gaps = 40/683 (5%)
Query: 41 MLECDVQPNVATFGMLMGLYKKSWNVE---------EAEFAFNQMR-------KLGLVCE 84
M+E +V +V T+ ML+ + ++ NV+ E EF + K ++C+
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 85 S------AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLEN--WLVMLNAYSQQGKLE 136
Y +I ++ E A+ + L+ D + +L+N + ++++ + +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSL--LVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMI 196
A+ ++ M G + Y+ + K ME A+ LF + GL P Y S+I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
EG+ R N R+ E+K + T++ D +GA N + +M+ GC+
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 257 HSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV 315
+ ++ TL++ + + R + R+LK Q + ++ + L++ K +D+A
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 316 LGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCT-MIDTYS 374
L + Y I ++ A+A K M C PN ++CT +I+ Y
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN-KVLCTGLINEYC 568
Query: 375 VMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDA 434
G EA Y ++ GI D +TV++ K + DA + M + K I PD
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDV 627
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDE 494
+ Y ++ + + G + K S ++ ++++ G+T N +Y+ ++ R+ I++ + DE
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 495 MLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKN 553
M G PN +T ++D Y K+ +LF K GLV D Y T++ + +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 554 LESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHY---- 609
+E + T+ G + S +N++++ K G+ E VL R+ + S FD +
Sbjct: 748 VER-AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPN 804
Query: 610 --TYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVK 667
TYNIMID ++G + + +++ L P + +Y +L+ Y G + +
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 668 EMRENGIEPDKITYTNMITALQR 690
E GIEPD I Y+ +I A +
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLK 887
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/589 (22%), Positives = 259/589 (43%), Gaps = 13/589 (2%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
SLG L+ ++ LI K + H M+ + + + + K +E
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 68 EAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
+A+ F+ M GL+ ++ AY+++I Y R + E++ +++ +V + + ++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
G L+ A ++ M +G PN+V Y TL+ + + S A R+ +K+ G+
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNT 246
PD Y S+I G +A EA+ + E+ G KPNA I+ + + + A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 247 LDDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVK 305
+ +M G + +L T L+ Y K G+ + + Q +L + + ++L+ K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 306 HGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHI 365
+ +DDA ++ + R K + Y +LI G++ A I+ M PN+ I
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 366 MCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETME 425
++ + G +A++L + G+ + + + ++ Y K+G L +A + + M
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM- 723
Query: 426 KQKDIEPDAYLYCDMLRIYQQCGMLDKL--SYLYYKILKSGITWNQELYDCVINCCAR-- 481
K K + PD+++Y ++ C L+ + + + K G + ++ +IN +
Sbjct: 724 KLKGLVPDSFVYTTLV---DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 482 --ALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVD-V 538
L + L+R+ D PN +T N+M+D K + ++LF + L+ V
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 539 ISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEG 587
I+Y +++ Y + M E G Y+ +++A+ KEG
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/653 (20%), Positives = 268/653 (41%), Gaps = 61/653 (9%)
Query: 53 FGMLMGLYKKSWNVEEAEFAFNQMRKLGLV-----CESAYSAMITIYTRLSLYEKAEEVI 107
FG+L Y +EEA F F+ L LV C+ A++ + RL L+ +V
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLR-WNRLDLFW---DVY 209
Query: 108 RLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKV 167
+ + E VV +++ + +++ A+ + G ++ + VL + + +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL------------- 256
Query: 168 SNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNL 227
N++ A +L S+ GL P + TY +I+G + +AK E+ LG +
Sbjct: 257 -NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 228 YTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLY 286
LI+ K + + A + +M++ G + + K G + + G +
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 287 QHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLAN 346
++ + + L+ Y + + ++L + + ++ V Y ++ SG L
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 347 AVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVR 406
A I M +SG R +++ +T +++
Sbjct: 436 AYNIVKEMI-----------------------------------ASGCRPNVVIYTTLIK 460
Query: 407 MYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGIT 466
+++ DA VL+ M K++ I PD + Y ++ + +D+ +++++G+
Sbjct: 461 TFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 467 WNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIY-GKAKLFKRVRK 525
N Y I+ A + EM + G PN + +++ Y K K+ +
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 526 LFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGK 585
SM + L D +Y ++ +N ++ +EM+ G + + +Y +++ + K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 586 EGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCS 645
G M+ ++ M E T + YN+++ + G I + +L E+ GL P+ +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 646 YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAI 698
Y T+I Y +G + +A L EM+ G+ PD YT ++ R + AI
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 179/391 (45%), Gaps = 34/391 (8%)
Query: 36 KWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIY 94
K+ M EC V PN L+ Y K V EA A+ M G++ ++ Y+ ++
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 95 TRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNI 154
+ + AEE+ R +R + P++ ++ V++N +S+ G +++A + M E G +PN+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 155 VAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKE 214
+ YN L+ G+ + +E A+ L + GL P+ TY ++I+G+ ++G+ EA + E
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 215 LKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSI-LGTLLQAYEKAGR 273
+K G P++ TL++ + D E A+ T+ GC S+ L+ K G+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAI-TIFGTNKKGCASSTAPFNALINWVFKFGK 781
Query: 274 TDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHL 333
T+ +L + L+D + G D Y++
Sbjct: 782 TELKTEVL------------------------NRLMDGSFDRFGKPN-------DVTYNI 810
Query: 334 LICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSG 393
+I G+L A +++ M + P + ++++ Y MG E ++ ++G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 394 IRLDLIAFTVVVRMYVKAGSLKDACAVLETM 424
I D I ++V++ ++K G A +++ M
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 192/468 (41%), Gaps = 39/468 (8%)
Query: 260 ILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDK 319
+ G L Y G + + S+ ++ L+ C +L+ A ++ +D V
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 320 RWKDTVFEDNLYHLLICSCKDSGHLA---------------------NAVKIYSHMHICD 358
++ VF+ YH+LI + +G++ A+K+ M IC
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM-ICK 271
Query: 359 G-KPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDA 417
G P + +ID + +A+ L + + S G+ LD +++++ +K + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 418 CAVLETMEKQK-DIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVI 476
++ M +I+P Y+Y + + + G+++K L+ ++ SG+ + Y +I
Sbjct: 332 KGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 477 NCCARALPIDELSRVFDEMLQHGFTPNIITLNVML-------DIYGKAKLFKRVRKLFSM 529
R + + + EM + + T ++ D+ G + K M
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE------M 443
Query: 530 AKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQM 589
+V+ Y T+I + QN ++EM+ G + + YNS++ K +M
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 590 ENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTL 649
+ ++ L M E + +TY I Y E + E++ECG+ P+ L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 650 IKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
I Y G V +A + M + GI D TYT ++ L +NDK +A
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 111/302 (36%), Gaps = 79/302 (26%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G N ++N L+ + G +E + M + PN T+ ++ Y KS ++ EA
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKA------------------------- 103
F++M+ GLV +S Y+ ++ RL+ E+A
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 104 ---------EEVIRLIREDKV----VPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGF 150
EV+ + + PN + +M++ ++G LE A+ + M+ A
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 151 SPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY------------------ 192
P ++ Y +L+ GY K+ +F G+EPD Y
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 193 ----------------------RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTL 230
R+++ G+ + G A+ + + L Y P+++ + L
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956
Query: 231 IN 232
IN
Sbjct: 957 IN 958
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/645 (22%), Positives = 286/645 (44%), Gaps = 52/645 (8%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
FN LI A CV+ + F M E +PN TFG+L+ Y K+ ++ N M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 78 KLGLVCESA-YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
G++ Y+ +++ + R + +E+++ +RE+ +VP++ + ++A ++GK+
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 137 EAELVLVSMREAGF----SPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
+A + M + PN + YN ++ G+ KV +E A+ LF SI++ +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 193 RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLN 252
++G R G + EA+ K++ G P+ + L++ K A + M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 253 MG-CQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDD 311
G C + G LL Y G+ D +L+ + + L N +C+IL+ + K G I +
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 312 AMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGK----------- 360
A ++L K + ++++ SG L A++I M +
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 361 ------------PNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
P+L T+++ G F EA+ L+ + ++ D +A+ + + +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 409 VKAGSLKDACAVLETMEKQ---KDIEPDAYLYCDML---RIYQQCGMLDKLSYLYYKILK 462
K G + A VL+ MEK+ K +E L + +I++ G++D++ +
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK-------E 622
Query: 463 SGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKR 522
GI+ N Y+ I +++ + + DEM+Q PN+ + +++ + K F
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 523 VRKLFSMA-----KKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYN 577
+++F A +K GL ++ +N ++AA K E + + + GF + Y
Sbjct: 683 AQEVFETAVSICGQKEGLYSLM-FNELLAAGQLLKATELLEAVLDR----GFELGTFLYK 737
Query: 578 SMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
++++ K+ ++E +L +M + FD +ID G+ G
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 138/664 (20%), Positives = 289/664 (43%), Gaps = 34/664 (5%)
Query: 63 SWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPN-LEN 121
+W + + F+ G+ + A + I R ++E+ +E+ LI + L +
Sbjct: 19 AWRIFKRIFSSPSEESHGISLD-ATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSS 77
Query: 122 WLVMLNAYSQQGKLEEA--ELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLS 179
L +++ +++ +++A + LV R P++ YN L+ K +E L+
Sbjct: 78 LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137
Query: 180 IKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYED 239
+ G+ P T+ +I + A+ + E+ G KPN L+ + K
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 240 EEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSI 298
+ + L+ M + G + ++ T++ ++ + GR D+ ++++ + ++ ++ + +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 299 LVMAYVKHGLIDDAMKVLGDKRWKDTV----FEDNLYHLLICSCKDSGHLANAVKIYSHM 354
+ A K G + DA ++ D + + Y+L++ G L +A ++ +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 355 HICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSL 414
D +L + G F EAE + + GI + ++ +++ K G L
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 415 KDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDC 474
DA ++ M K+ + PDA Y +L Y G +D L +++++ N +
Sbjct: 378 SDAKTIVGLM-KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD-IYGKAKLFKRVRKLFSM---- 529
+++ + I E + +M + G+ + +T N+++D + G +L K + + M
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 530 AKKLG-------------------LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFS 570
+ LG L D+I+Y+T++ + + EM +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 571 VSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGV 630
AYN + + K+G++ + VL+ M++ C TYN +I G + I E+ G+
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 631 LTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQR 690
+ E+KE G+ P++C+YNT I+ VEDA L+ EM + I P+ ++ +I A +
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 691 NDKF 694
F
Sbjct: 677 VPDF 680
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 185/447 (41%), Gaps = 32/447 (7%)
Query: 280 ILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCK 339
+L G Q FNL L+ A +D A ++ + K + + +L+
Sbjct: 139 VLCGIAPQTYTFNL-----LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 340 DSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLI 399
+G +++ + M PN I T++ ++ G ++EK+ ++ G+ D++
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 400 AFTVVVRMYVKAGSLKDACAVLETMEKQKDI---EPDAYLYCDMLRIYQQCGMLDKLSYL 456
F + K G + DA + ME + + P++ Y ML+ + + G+L+ L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 457 YYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGK 516
+ I ++ + + Y+ + R E V +M G P+I + N+++D K
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 517 AKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEA 575
+ + + + K+ G+ D ++Y ++ Y +++ S +QEM + +
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 576 YNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELK 635
N +L + K G++ + +LR+M E D T NI++D G +++ + ++ ++
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 636 -----------------------ECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMREN 672
E PDL +Y+TL+ AG +A L EM
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 673 GIEPDKITYTNMITALQRNDKFLEAIK 699
++PD + Y I + K A +
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFR 580
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 184/430 (42%), Gaps = 14/430 (3%)
Query: 280 ILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV--LGDKRWKDTVFEDNLYHLLICS 337
IL S+ + L +L S +V + K ID A L R+ + LY+LL+ S
Sbjct: 65 ILSSSIQKTKLSSLLS---VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLES 121
Query: 338 CKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLD 397
C + +Y M +C P + +I A +L+ + G + +
Sbjct: 122 CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN 181
Query: 398 LIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLY 457
F ++VR Y KAG +L ME + P+ +Y ++ + + G D +
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNAME-SFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 458 YKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGF----TPNIITLNVMLDI 513
K+ + G+ + ++ I+ + + + SR+F +M + PN IT N+ML
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 514 YGKAKLFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVS 572
+ K L + + LF S+ + L + SYN + ++ + +++M G S
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 573 LEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLT 632
+ +YN ++D K G + + K ++ MK D TY ++ Y G ++ +L
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 633 ELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN- 691
E+ P+ + N L+ + G + +A L+++M E G D +T ++ L +
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 692 --DKFLEAIK 699
DK +E +K
Sbjct: 481 ELDKAIEIVK 490
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/226 (17%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 488 LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSM--AKKLGLVDVISYNTII 545
R+F + ++ + I +AK+ + +++L ++ + + + S +++
Sbjct: 23 FKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVV 82
Query: 546 AAYGQNKNLESMSSTVQ--EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETS 603
+ + ++ +++ Q +F S+ YN +L++ KE ++E + + M
Sbjct: 83 SIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCG 142
Query: 604 CTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAV 663
YT+N++I + ++ + E+ E G +P+ ++ L++ Y AG+ + +
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 664 GLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
L+ M G+ P+K+ Y ++++ R + ++ K M++ GL
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 18/215 (8%)
Query: 41 MLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSL 99
M E + PN+ T+ + + VE+A ++M + + ++ +I + ++
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679
Query: 100 YEKAEEVIRLIREDKVVPNLEN-WLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYN 158
++ A+EV + E + +M N G+L +A +L ++ + GF Y
Sbjct: 680 FDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 159 TLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHL 218
L+ K +E A + + D G D +I+G G+ GN +EA + ++ +
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797
Query: 219 G--------YKPNASNLYTLINLHAKYEDEEGAVN 245
PNA ++H K ++ G N
Sbjct: 798 ASVGEVANKVDPNAR------DIHQKKHNKNGGNN 826
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 145/613 (23%), Positives = 257/613 (41%), Gaps = 79/613 (12%)
Query: 87 YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMR 146
Y I +LS K E+ ++ D++ P++ + V+++ + ++ +AE + M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 147 EAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYR 206
P+++ YNTL+ GY K N E + ++ +K +EP T+ ++++G +AG
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 207 EAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQ 266
+A+ KE+K LG+ P+A L + ++ E E A+ + ++ G
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG------------ 349
Query: 267 AYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVF 326
V N +CSIL+ A K G I+ A ++LG + K V
Sbjct: 350 ----------------------VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV- 386
Query: 327 EDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLY 386
PN I TMID Y G A
Sbjct: 387 ----------------------------------PNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 387 LNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQ 446
++ G++ D +A+ ++R + + G +++A + M K K + P Y ++ Y +
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM-KLKGVSPSVETYNILIGGYGR 471
Query: 447 CGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIIT 506
DK + ++ +G N Y +INC + + E V +M G +P +
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 507 LNVMLD-IYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQ 565
N+++D K K+ R M KK +++++YNT+I L + E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 566 FDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWIN 625
G + YNS++ YG G ++ + MK + TY+++I + ++G
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI-- 649
Query: 626 EVVGVLTE--LKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTN 683
LTE E L+PDL YN ++ Y + G +E A L K+M E I DK TY +
Sbjct: 650 ----ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 684 MITALQRNDKFLE 696
+I + K E
Sbjct: 706 LILGQLKVGKLCE 718
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/572 (22%), Positives = 240/572 (41%), Gaps = 46/572 (8%)
Query: 121 NWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSI 180
++L++ ++ + EA + ++R G P+ + L+ K +FL+I
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 181 KDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDE 240
+ P + Y I+ + + + + +KH P+ LI+ K +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 241 EGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSIL 299
A D+ML S I TL+ Y KAG + ++ + H+ +L + + L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 300 VMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLAN-----AVKIYSHM 354
+ K G+++DA VL K KD F + + I G+ +N A+ +Y
Sbjct: 291 LKGLFKAGMVEDAENVL--KEMKDLGFVPDAFTFSILF---DGYSSNEKAEAALGVYETA 345
Query: 355 HICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSL 414
K N + +++ G +AE++ + G+ + + + ++ Y + G L
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 415 KDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDC 474
A +E MEKQ ++PD Y ++R + + G ++ K+ G++ + E Y+
Sbjct: 406 VGARMKIEAMEKQ-GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLG 534
+I R D+ + EM +G PN
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPN------------------------------- 493
Query: 535 LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKN 594
V+SY T+I + L ++M+ G S + YN ++D +G++E+
Sbjct: 494 ---VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 595 VLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYG 654
+ M + + TYN +ID G ++E +L E+ GL+PD+ +YN+LI YG
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 655 IAGMVEDAVGLVKEMRENGIEPDKITYTNMIT 686
AG V+ + L +EM+ +GI+P TY +I+
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 177/382 (46%), Gaps = 2/382 (0%)
Query: 330 LYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNL 389
+Y++LI + +A +++ M P+L T+ID Y G ++ K+ +
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 390 KSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGM 449
K+ I LI F +++ KAG ++DA VL+ M K PDA+ + + Y
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSNEK 334
Query: 450 LDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNV 509
+ +Y + SG+ N ++N + I++ + + G PN + N
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 510 MLDIY-GKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDG 568
M+D Y K L K+ +M K+ D ++YN +I + + +E+ V +M+ G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 569 FSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVV 628
S S+E YN ++ YG++ + + ++L+ M++ + +Y +I+ + + E
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 629 GVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
V ++++ G+ P + YN LI G +EDA KEM + GIE + +TY +I L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 689 QRNDKFLEAIKWSLWMKQIGLQ 710
K EA L + + GL+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLK 596
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 216/497 (43%), Gaps = 9/497 (1%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLM-GLYKKSWNVEEAEFAFNQM 76
+NTLI K G E K M ++P++ TF L+ GL+K VE+AE +M
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM-VEDAENVLKEM 310
Query: 77 RKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKL 135
+ LG V ++ +S + Y+ E A V + V N ++LNA ++GK+
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 136 EEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSM 195
E+AE +L G PN V YNT++ GY + ++ A+ +++ G++PD Y +
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 196 IEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGC 255
I + G A+ ++K G P+ LI + + + + + L +M + G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 256 QHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMK 314
+ + GTL+ K + + + + V + ++L+ G I+DA +
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 315 VLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYS 374
+ K Y+ LI +G L+ A + + KP++ ++I Y
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 375 VMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDA 434
G LY +K SGI+ L + +++ + K G + E + + ++PD
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDL 665
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDE 494
+Y +L Y G ++K L ++++ I ++ Y+ +I + + E+ + DE
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 495 MLQHGFTPNIITLNVML 511
M P T N+++
Sbjct: 726 MNAREMEPEADTYNIIV 742
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 17/340 (5%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G K + +N LI + G +E K + M V P+V T+ +L+G Y + + ++
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
+M G + +Y +I + S +A+ V R + + V P + + ++++
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
+GK+E+A M + G N+V YNTL+ G + A+ L L I GL+PD
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK-----YEDEEGA 243
TY S+I G+G AGN + Y+E+K G KP + LI+L K E G
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGE 658
Query: 244 VNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
++ D+L + +L Y G + + K + + + + T+ + L++
Sbjct: 659 MSLKPDLL--------VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI---CSCKD 340
+K G + + ++ + ++ E + Y++++ C KD
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 197/460 (42%), Gaps = 43/460 (9%)
Query: 2 IREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYK 61
+ E + G K+N + L+ A K G +E + + + PN + ++ Y
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 62 KSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLE 120
+ ++ A M K G+ + AY+ +I + L E AE+ + ++ V P++E
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 121 NWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSI 180
+ +++ Y ++ + ++ +L M + G PN+V+Y TL+ K S + AQ + +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 181 KDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDE 240
+D G+ P Y +I+G G +A + KE+ G + NL T
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE---LNLVT----------- 566
Query: 241 EGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILV 300
NTL D L+M + S LL+ K + D +F S L+
Sbjct: 567 ---YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD--------------VFTYNS---LI 606
Query: 301 MAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGK 360
Y G + + + + + YHLLI C G + +++ M + K
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSL---K 662
Query: 361 PNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAV 420
P+L + ++ Y+V G +A L + I LD + ++ +K G L + ++
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 421 LETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLS-YLYYK 459
++ M +++EP+A Y +++ C + D +S Y++Y+
Sbjct: 723 IDEM-NAREMEPEADTYNIIVK--GHCEVKDYMSAYVWYR 759
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 595 VLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYG 654
+ RMK + YN++ID + +N+ + E+ L P L +YNTLI Y
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 655 IAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
AG E + + + M+ + IEP IT+ ++ L + +A MK +G
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 146/639 (22%), Positives = 284/639 (44%), Gaps = 31/639 (4%)
Query: 86 AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSM 145
Y+ ++ R L ++ ++V + EDKV PN+ + M+N Y + G +EEA + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 146 REAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNY 205
EAG P+ Y +L+ GY + ++++A ++F + G +E Y +I G A
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 206 REAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHS-SILGTL 264
EA + ++K P LI E + A+N + +M G + + L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
+ + + + +L L + ++ N+ + + L+ Y K G+I+DA+ V+ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 325 VFEDNLYHLLICS-CKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAE 383
Y+ LI CK + H A+ + + M P++ ++ID G F A
Sbjct: 425 SPNTRTYNELIKGYCKSNVH--KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 384 KLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRI 443
+L + G+ D +T ++ K+ +++AC + +++E QK + P+ +Y ++
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE-QKGVNPNVVMYTALIDG 541
Query: 444 YQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPN 503
Y + G +D+ + K+L N ++ +I+ + E + + ++M++ G P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 504 IITLNVMLDIYGKAKLF----KRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSS 559
+ T +++ K F R +++ S K D +Y T I Y + L
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK---PDAHTYTTFIQTYCREGRLLDAED 658
Query: 560 TVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID--- 616
+ +M+ +G S L Y+S++ YG GQ +VL+RM++T C +T+ +I
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 617 --IYGEQGW-------------INEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVED 661
YG+Q + VV +L ++ E + P+ SY LI G +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 662 AVGLVKEMREN-GIEPDKITYTNMITALQRNDKFLEAIK 699
A + M+ N GI P ++ + +++ + K EA K
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 251/577 (43%), Gaps = 84/577 (14%)
Query: 154 IVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYK 213
I YNTL+ + ++ +++++ + + + P+ TY M+ G+ + GN EA Y
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 214 ELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGR 273
++ G P+ +LI + + +D + A ++M GC+ + +
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV------------- 289
Query: 274 TDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGL-----IDDAMKVLGDKRWKDTVFED 328
Y H++ HGL ID+AM + + +
Sbjct: 290 -----------AYTHLI---------------HGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 329 NLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLN 388
Y +LI S S + A+ + M KPN+H +ID+ F +A +L
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 389 LKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLR------ 442
+ G+ ++I + ++ Y K G ++DA V+E ME +K + P+ Y ++++
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK-LSPNTRTYNELIKGYCKSN 442
Query: 443 IYQQCGMLDKLSYLYYKILKSGITWN------------------------------QELY 472
+++ G+L+K+ L K+L +T+N Q Y
Sbjct: 443 VHKAMGVLNKM--LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 473 DCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKA-KLFKRVRKLFSMAK 531
+I+ ++ ++E +FD + Q G PN++ ++D Y KA K+ + L M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 532 KLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMEN 591
K L + +++N +I + L+ + ++M G ++ ++ K+G ++
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 592 FKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIK 651
+ ++M + D +TY I Y +G + + ++ +++E G+ PDL +Y++LIK
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 652 AYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
YG G A ++K MR+ G EP + T+ ++I L
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 277/635 (43%), Gaps = 36/635 (5%)
Query: 10 GAKLNFQLFNTLIYA-CNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
G + N + LI+ C R ++ F M + + P V T+ +L+ S E
Sbjct: 283 GCRRNEVAYTHLIHGLCVARR-IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 69 AEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
A +M + G+ Y+ +I +EKA E++ + E ++PN+ + ++N
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
Y ++G +E+A V+ M SPN YN L+ GY K SN+ A + + + + P
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP 460
Query: 188 DETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTL 247
D TY S+I+G R+GN+ A + G P+ ++I+ K + E A +
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 248 DDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKH 306
D + G + ++ T L+ Y KAG+ D +L+ L ++ L N + + L+
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 307 GLIDDAMKVLGDKRWK----DTVFEDN-LYHLLICSCKDSGHLANAVKIYSHMHICDGKP 361
G + +A +L +K K TV D L H L+ KD G +A + M KP
Sbjct: 581 GKLKEAT-LLEEKMVKIGLQPTVSTDTILIHRLL---KD-GDFDHAYSRFQQMLSSGTKP 635
Query: 362 NLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVL 421
+ H T I TY G +AE + ++ +G+ DL ++ +++ Y G A VL
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 422 ETMEKQKDIEPDAYLYCDMLRIYQQ-------------CGM-----LDKLSYLYYKILKS 463
+ M + EP + + +++ + C M D + L K+++
Sbjct: 696 KRM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQH-GFTPNIITLNVMLDIYGKAKLFKR 522
+T N + Y+ +I + +VFD M ++ G +P+ + N +L K K
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 523 VRKLFSMAKKLG-LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLD 581
K+ +G L + S +I + E +S Q + G+ A+ ++D
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 582 AYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 616
GK+G +E F + M++ C F TY+++I+
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 186/453 (41%), Gaps = 60/453 (13%)
Query: 309 IDDAMKVLG--DKRWKDTVFEDNLYHLLICSCKDS--------GHLANAVKIYSHM---H 355
+ DA+ VL K KD FE L + LI C ++ G + ++Y M
Sbjct: 156 VGDALYVLDLCRKMNKDERFE--LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDK 213
Query: 356 ICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLK 415
+C PN++ M++ Y +G EA + + +G+ D +T ++ Y + L
Sbjct: 214 VC---PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 416 DACAVLETME--------------------------------KQKDIE--PDAYLYCDML 441
A V M K KD E P Y ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 442 RIYQQCGMLDKLSYL--YYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHG 499
+ CG K L ++ ++GI N Y +I+ ++ + +ML+ G
Sbjct: 331 K--SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 500 FTPNIITLNVMLDIYGKAKLFKRVRKLFSM--AKKLGLVDVISYNTIIAAYGQNKNLESM 557
PN+IT N +++ Y K + + + + ++KL + +YN +I Y ++ N+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS-PNTRTYNELIKGYCKS-NVHKA 446
Query: 558 SSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDI 617
+ +M + YNS++D + G ++ +L M + D +TY MID
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 618 YGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPD 677
+ + E + L++ G+ P++ Y LI Y AG V++A ++++M P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 678 KITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
+T+ +I L + K EA M +IGLQ
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 41 MLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES--AYSAMITIYTRLS 98
M+E V PN ++ L+ + N+ AE F+ M++ + S ++A+++ +L
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 99 LYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYN 158
+ +A +V+ + +P LE+ V++ ++G+ E V ++ + G+ + +A+
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 159 TLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEG 198
++ G GK +EA LF ++ G + TY +IEG
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110, chloroplastic
OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=2
Length = 1440
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 170/781 (21%), Positives = 328/781 (41%), Gaps = 88/781 (11%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + + +NTL+ AC++ ++ K F M QP++ T+ ++ +Y + EA
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
E F ++ G ++ Y++++ + R EK +EV + +++ + + +++
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 129 YSQQGKLE------------------------------------EAELVLVSMREAGFSP 152
Y +QG+L+ EA ++ M + G P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 153 NIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYY 212
+ Y+ L+ GY K E A+ F + G +PD Y M++ R R+A Y
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Query: 213 KELKHLGYKPNASNLYTLINL----HAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAY 268
+++ G+ P+ + LY L+ L + +D + + ++++ M S + + +
Sbjct: 532 RDMISDGHTPSYT-LYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECF 590
Query: 269 EKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVL--------GDKR 320
+ A R V I G + L N T SIL +Y G +A ++L G KR
Sbjct: 591 DLAARQLKVA-ITNG----YELENDTLLSIL-GSYSSSGRHSEAFELLEFLKEHASGSKR 644
Query: 321 W------------------KDTVFED-----------NLYHLLICSCKDSGHLANAVKIY 351
D F D +Y L+ C + H A A +++
Sbjct: 645 LITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVF 704
Query: 352 SHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIA-FTVVVRMYVK 410
S + + + + + +M+ Y +G A ++ ++ G +T ++ Y K
Sbjct: 705 SDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGK 764
Query: 411 AGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQE 470
+ A +V+ + +Q PD + ++ Y QCG ++ ++ +++ G + E
Sbjct: 765 QKLWQKAESVVGNL-RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVE 823
Query: 471 LYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMA 530
+ +++ ++EL V +E+ GF + ++ +MLD + +A V+K++S
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM 883
Query: 531 KKLGLVDVIS-YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQM 589
K G + I Y +I + K + V EM+ F V L +NSML Y
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 590 ENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTL 649
+ V +R+KET D TYN +I +Y E ++ +++ GL P L +Y +L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 650 IKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
I A+G +E A L +E+ G++ D+ Y M+ + + +A K MK G+
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 710 Q 710
+
Sbjct: 1064 E 1064
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 41/365 (11%)
Query: 347 AVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVR 406
AV+I++ G + + M+ YS G F++A++L ++ G DLI+F ++
Sbjct: 210 AVEIFTRAEPTVGD-RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN 268
Query: 407 MYVKAGSLKDACAV-LETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGI 465
+K+G L AV L M + + PDA I
Sbjct: 269 ARLKSGGLTPNLAVELLDMVRNSGLRPDA------------------------------I 298
Query: 466 TWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRK 525
T+N +++ C+R +D +VF++M H P++ T N M+ +YG+ L +
Sbjct: 299 TYN-----TLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 526 LFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYG 584
LF + G D ++YN+++ A+ + +N E + Q+MQ GF YN+++ YG
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 585 KEGQMENFKNVLRRMKETSC-TFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDL 643
K+GQ++ + + MK S D TY ++ID G+ E +++E+ + G++P L
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTL 473
Query: 644 CSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLW 703
+Y+ LI Y AG E+A M +G +PD + Y+ M+ L R ++ +A W L+
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA--WGLY 531
Query: 704 MKQIG 708
I
Sbjct: 532 RDMIS 536
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 145/705 (20%), Positives = 284/705 (40%), Gaps = 61/705 (8%)
Query: 43 ECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEK 102
E V V + +MG+Y +S +A+ + MR+ G V + +I+ T ++ K
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPD-----LISFNTLINARLK 272
Query: 103 --------AEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNI 154
A E++ ++R + P+ + +L+A S+ L+ A V M P++
Sbjct: 273 SGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDL 332
Query: 155 VAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKE 214
YN +++ YG+ A+RLF+ ++ G PD TY S++ + R N + K Y++
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 215 LKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL--GTLLQAYEKAG 272
++ +G+ + T+I+++ K + A+ DM + ++ + L+ + KA
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 273 RTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYH 332
RT ++ L + L + S L+ Y K G ++A T ++ Y
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 333 LLICSCKDSGHLANAVKIYSHMHICDGKPNLH------------------IMCTMIDTYS 374
+++ A +Y M I DG + I T+ D
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDM-ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 375 VMGM--------------FTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAV 420
+ GM F A + ++G L+ ++ Y +G +A +
Sbjct: 572 LCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFEL 631
Query: 421 LETMEKQKD------IEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDC 474
LE +++ E L+C ++ LD+ Y + + +Y+
Sbjct: 632 LEFLKEHASGSKRLITEALIVLHC---KVNNLSAALDE--YFADPCVHGWCFGSSTMYET 686
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLG 534
+++CC E S+VF ++ G + M+ +Y K + ++ + A+ G
Sbjct: 687 LLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKG 746
Query: 535 LVDVIS--YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENF 592
S Y II AYG+ K + S V ++ G + L+ +NS++ AY + G E
Sbjct: 747 FHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806
Query: 593 KNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKA 652
+ + M + + NI++ G + E+ V+ EL++ G + S ++ A
Sbjct: 807 RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866
Query: 653 YGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
+ AG + + + M+ G P Y MI L + + +A
Sbjct: 867 FARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 177/415 (42%), Gaps = 41/415 (9%)
Query: 67 EEAEFAFNQMRKLGL--VCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLV 124
E A NQ G C Y+ +I Y + L++KAE V+ +R+ P+L+ W
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 125 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
+++AY+Q G E A + +M G SP + + N L+ +E + ++D+G
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK---YEDEE 241
+ +++ M++ + RAGN E K Y +K GY P +I L K D E
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 242 GAVNTLDD------------MLNMGCQHSSILGTLLQAYEKAGRTDNVP----------- 278
V+ +++ ML M T +Q Y++ T P
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKT-VQVYQRIKETGLEPDETTYNTLIIM 971
Query: 279 -----RILKGSLYQHVLFN------LTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFE 327
R +G L + N L + L+ A+ K ++ A ++ + K +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 328 DNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
+ YH ++ +DSG + A K+ M +P L M ++ +YS G EAEK+
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLR 442
NLK + + L + ++ V+ Y+++ L M+K+ +EPD ++ +R
Sbjct: 1092 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE-GLEPDHRIWTCFVR 1145
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 147/740 (19%), Positives = 305/740 (41%), Gaps = 93/740 (12%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+ LI + K A ML+ ++P + T+ L+ Y K+ EEAE F+ M
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 78 KLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
+ G ++ AYS M+ + R + KA + R + D P+ + +M+ ++ + +
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Query: 137 EAELVLVSMRE-AGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSM 195
+ + + M E G +P + ++++ G+ ++ AA++L ++I + G E + T S+
Sbjct: 561 DIQKTIRDMEELCGMNP--LEISSVLVK-GECFDL-AARQLKVAITN-GYELENDTLLSI 615
Query: 196 IEGWGRAGNYREAKWYYKELKHLGYKPNASNLYT--LINLHAKYEDEEGAVN-------- 245
+ + +G + EA + LK + + L T LI LH K + A++
Sbjct: 616 LGSYSSSGRHSEAFELLEFLKE--HASGSKRLITEALIVLHCKVNNLSAALDEYFADPCV 673
Query: 246 -----------------------------TLDDMLNMGCQHS-SILGTLLQAYEKAGRTD 275
D+ GC+ S S+ +++ Y K G +
Sbjct: 674 HGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPE 733
Query: 276 NVPRILKGSLYQHVLFNLTSCSIL----VMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLY 331
+++ + + F +CS + + AY K L A V+G+ R + +
Sbjct: 734 TAHQVVNQAETKGFHF---ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTW 790
Query: 332 HLLICSCKDSGHLANAVKIYSHMHICDGKPN-------LHIMCT---------------- 368
+ L+ + G A I++ M P LH +C
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQD 850
Query: 369 ------------MIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKD 416
M+D ++ G E +K+Y ++K++G + + +++ + K ++D
Sbjct: 851 MGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 417 ACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVI 476
A ++ ME + + + + ++ ML++Y K +Y +I ++G+ ++ Y+ +I
Sbjct: 911 AEIMVSEME-EANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
Query: 477 NCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL- 535
R +E + +M G P + T ++ +GK K ++ +LF GL
Sbjct: 970 IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK 1029
Query: 536 VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNV 595
+D Y+T++ + + +Q M+ G +L + ++ +Y G + + V
Sbjct: 1030 LDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKV 1089
Query: 596 LRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGI 655
L +K+T Y+ +ID Y N + L E+K+ GL PD + ++A
Sbjct: 1090 LSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASF 1149
Query: 656 AGMVEDAVGLVKEMRENGIE 675
+ + + L+K + + G +
Sbjct: 1150 SKEKIEVMLLLKALEDIGFD 1169
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKR--VRKLF 527
++Y+ ++ +R+ + + D M Q G P++I+ N +++ K+ +L
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 528 SMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKE 586
M + GL D I+YNT+++A ++ NL+ ++M+ L YN+M+ YG+
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 587 GQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSY 646
G + + ++ D TYN ++ + + +V V ++++ G D +Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 647 NTLIKAYGIAGMVEDAVGLVKEMRE-NGIEPDKITYTNMITALQRNDKFLEAIKWSLWMK 705
NT+I YG G ++ A+ L K+M+ +G PD ITYT +I +L + ++ +EA M
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 706 QIGLQ 710
+G++
Sbjct: 466 DVGIK 470
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 150/320 (46%), Gaps = 4/320 (1%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + + +N+L+ A + GC E F+ M+ P V + +L+ +EE
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEEL 841
Query: 70 EFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
+++ +G + +S+ M+ + R + +++ ++ +P + + +M+
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
+ ++ +AE+++ M EA F + +N+++ Y + + + +++ IK+ GLEPD
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
ETTY ++I + R E +++++LG P +LI+ K + E A +
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 249 DMLNMGCQ-HSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
++L+ G + S T+++ +G ++L+ + L + +L+++Y G
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Query: 308 LIDDAMKVLGDKRWKDTVFE 327
+A KVL + KDT E
Sbjct: 1082 NPQEAEKVLSN--LKDTEVE 1099
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 174/410 (42%), Gaps = 12/410 (2%)
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
E W RA E + L+H + PNA + ++ + ++ E AV
Sbjct: 169 ESWQRALEVFE----WLNLRHW-HSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGD 223
Query: 257 HSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV- 315
+ ++ Y ++G+ ++ + + +L S + L+ A +K G + + V
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 316 LGDKRWKDTVFEDNL-YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYS 374
L D + D + Y+ L+ +C +L AVK++ M +P+L MI Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 375 VMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDA 434
G+ EAE+L++ L+ G D + + ++ + + + + V + M+K D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM-GFGKDE 402
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILK--SGITWNQELYDCVINCCARALPIDELSRVF 492
Y ++ +Y + G LD L+ YK +K SG + Y +I+ +A E + +
Sbjct: 403 MTYNTIIHMYGKQGQLD-LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 493 DEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQN 551
EML G P + T + ++ Y KA + FS + G D ++Y+ ++ +
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 552 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKE 601
++M DG + S Y M+ KE + ++ + +R M+E
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
+S G KL+ ++T++ G K MM ++P +AT +LM Y S N
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 67 EEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
+EAE + ++ + + YS++I Y R Y E + ++++ + P+ W
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCF 1143
Query: 126 LNAYSQQGKLEEAELVLVSMREAGF 150
+ A S + E L+L ++ + GF
Sbjct: 1144 VRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 36/214 (16%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
+LG + +LI A K+ C +E
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKC-----------------------------------LE 1014
Query: 68 EAEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
+AE F ++ GL + S Y M+ I KAE+++++++ + P L +++
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
+YS G +EAE VL ++++ + Y++++ Y + + + L +K GLE
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGY 220
PD + + + E K L+ +G+
Sbjct: 1135 PDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/573 (23%), Positives = 248/573 (43%), Gaps = 77/573 (13%)
Query: 112 EDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNME 171
+ + +P++ + +L+A ++ K + + M+ G S N+ YN L+ + + S +
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 172 AAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLI 231
A L + +G EP T S++ G+ +A ++ +GY+P+ TLI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 232 N---LHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQH 288
+ LH K + AV +D M+ GCQ
Sbjct: 198 HGLFLHNKASE---AVALVDRMVQRGCQP------------------------------- 223
Query: 289 VLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAV 348
NL + ++V K G ID A +L +Y +I S H +A+
Sbjct: 224 ---NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 349 KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
+++ M +PN+ ++I +++A +L ++ I +++ F ++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 409 VKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWN 468
VK G L +A + + M K + I+PD + Y ++ + C M D+L
Sbjct: 341 VKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGF--C-MHDRL--------------- 381
Query: 469 QELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
DE +F+ M+ PN++T N +++ + KAK +LF
Sbjct: 382 -----------------DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 529 MAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEG 587
+ GLV + ++Y T+I + Q ++ ++ ++M DG ++ YN++LD K G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 588 QMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYN 647
++E V ++ + YTYNIMI+ + G + + + L G++PD+ YN
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 648 TLIKAYGIAGMVEDAVGLVKEMRENGIEPDKIT 680
T+I + G+ E+A L ++MRE+G PD T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 198/463 (42%), Gaps = 13/463 (2%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
LG N +N LI +R + L M++ +P++ T L+ Y + +
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 69 AEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV-----PNLENWL 123
A +QM ++G ++ T+ L L+ KA E + L+ D++V PNL +
Sbjct: 174 AVALVDQMVEMGYRPDTI--TFTTLIHGLFLHNKASEAVALV--DRMVQRGCQPNLVTYG 229
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
V++N ++G ++ A +L M A N+V Y+T++ K + + A LF +++
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
G+ P+ TY S+I + +A ++ PN LI+ K A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 244 VNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMA 302
D+M+ +L+ + R D + + + + N+ + + L+
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 303 YVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG-KP 361
+ K ID+ +++ + + V Y LI + NA ++ M + DG P
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHP 468
Query: 362 NLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVL 421
N+ T++D G +A ++ L+ S + + + +++ KAG ++D +
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 422 ETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSG 464
++ K ++PD +Y M+ + + G+ ++ L+ K+ + G
Sbjct: 529 CSLS-LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 189/465 (40%), Gaps = 41/465 (8%)
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKD 323
LL A K + D V + + + NL + +IL+ + + I A+ +LG +
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG--KMMK 148
Query: 324 TVFEDNLYHL--LICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTE 381
+E ++ L L+ +++AV + M +P+ T+I + +E
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A L + G + +L+ + VVV K G + A +L ME K IE + +Y ++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVI 267
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
+ D L+ ++ G+ N Y +I+C + SR+ +M++
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFS--------------------------------- 528
PN++T N ++D + K KL+
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 529 ---MAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGK 585
M K +V++YNT+I + + K ++ +EM G + Y +++ + +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 586 EGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCS 645
+N + V ++M + TYN ++D + G + + + V L+ + P + +
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 646 YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQR 690
YN +I+ AG VED L + G++PD I Y MI+ R
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 173/370 (46%), Gaps = 4/370 (1%)
Query: 331 YHLLI-CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNL 389
Y++LI C C+ S ++ A+ + M +P++ + ++++ Y ++A L +
Sbjct: 123 YNILINCFCRRS-QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 390 KSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGM 449
G R D I FT ++ +A A+++ M Q+ +P+ Y ++ + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 450 LDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNV 509
+D L K+ + I N +Y VI+ + D+ +F EM G PN+IT +
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 510 MLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDG 568
++ + + +L S M ++ +V+++N +I A+ + L EM
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 569 FSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVV 628
+ Y+S+++ + +++ K++ M C + TYN +I+ + + I+E V
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 629 GVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
+ E+ + GL + +Y TLI + A ++A + K+M +G+ P+ +TY ++ L
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 689 QRNDKFLEAI 698
+N K +A+
Sbjct: 481 CKNGKLEKAM 490
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTR 96
F +M+ D PNV T+ L+ + K+ ++E F +M + GLV + Y+ +I + +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
+ A+ V + + D V PN+ + +L+ + GKLE+A +V ++ + P I
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
YN ++ G K +E LF S+ G++PD Y +MI G+ R G EA +++++
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 217 HLGYKPNA 224
G P++
Sbjct: 568 EDGPLPDS 575
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/534 (18%), Positives = 221/534 (41%), Gaps = 39/534 (7%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCE-SAYSAMITIYTR 96
F M++ P++ F L+ K + +M++LG+ Y+ +I + R
Sbjct: 73 FGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 132
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
S A ++ + + P++ +LN Y ++ +A ++ M E G+ P+ +
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
+ TL+ G + A L + G +P+ TY ++ G + G+ A +++
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 217 HLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTD 275
+ N T+I+ KY E+ A+N +M N G + + I +L+ R
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 276 NVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI 335
+ R+L + + + N+ + + L+ A+VK
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKE----------------------------- 343
Query: 336 CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
G L A K+Y M P++ ++I+ + + EA+ ++ + S
Sbjct: 344 ------GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
+++ + ++ + KA + + + M Q+ + + Y ++ + Q D
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG 515
++ +++ G+ N Y+ +++ + +++ VF+ + + P I T N+M++
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 516 KAKLFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDG 568
KA + LF S++ K DVI YNT+I+ + + E + ++M+ DG
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 142/298 (47%), Gaps = 4/298 (1%)
Query: 404 VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS 463
++R + + L DA + M K + + P + + +L + D + L K+ +
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRV 523
GI+ N Y+ +INC R I + +M++ G+ P+I+TL+ +L+ Y K
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 524 RKLFSMAKKLGL-VDVISYNTIIAA-YGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLD 581
L ++G D I++ T+I + NK E+++ V M G +L Y +++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA-LVDRMVQRGCQPNLVTYGVVVN 233
Query: 582 AYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRP 641
K G ++ N+L +M+ + Y+ +ID + ++ + + TE++ G+RP
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 642 DLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
++ +Y++LI DA L+ +M E I P+ +T+ +I A + K +EA K
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 572 SLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVL 631
S+ +N +L A K + + ++ +M+ + + YTYNI+I+ + + I+ + +L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
++ + G P + + ++L+ Y + DAV LV +M E G PD IT+T +I L +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 692 DKFLEAIKWSLWMKQIGLQ 710
+K EA+ M Q G Q
Sbjct: 204 NKASEAVALVDRMVQRGCQ 222
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 166/382 (43%), Gaps = 26/382 (6%)
Query: 341 SGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIA 400
S L +A+ ++ M P++ ++ + M F L ++ GI +L
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 401 FTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYL-------YCDMLRIYQQCGMLDKL 453
+ +++ + + + A A+L M K EP YC RI ++D++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 454 SYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDI 513
+ Y+ IT+ ++ ++ A E + D M+Q G PN++T V+++
Sbjct: 182 VEMGYR--PDTITFTTLIHGLFLHNKA-----SEAVALVDRMVQRGCQPNLVTYGVVVN- 233
Query: 514 YGKAKLFKR--VRKLFSMAKKLGLV----DVISYNTIIAAYGQNKNLESMSSTVQEMQFD 567
L KR + F++ K+ +V+ Y+T+I + + ++ + + EM+
Sbjct: 234 ----GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 568 GFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEV 627
G ++ Y+S++ + + +L M E + T+N +ID + ++G + E
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 628 VGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITA 687
+ E+ + + PD+ +Y++LI + + +++A + + M P+ +TY +I
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 688 LQRNDKFLEAIKWSLWMKQIGL 709
+ + E ++ M Q GL
Sbjct: 410 FCKAKRIDEGVELFREMSQRGL 431
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
N +NTLI K ++ G + F M + + N T+ L+ + ++ + + A+ F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 74 NQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQ 132
QM G+ Y+ ++ + EKA V ++ K+ P + + +M+ +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETT 191
GK+E+ + S+ G P+++ YNT+++G+ + E A LF +++ G PD T
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
M+ + +S G N +NTL+ K G +E F + ++P + T+ +++
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 61 KKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPN 118
K+ VE+ F + G+ + Y+ MI+ + R L E+A+ + R +RED +P+
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 253/567 (44%), Gaps = 39/567 (6%)
Query: 134 KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYR 193
KL++A + M ++ P+IV ++ L++ K++ + L ++++G+ + TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 194 SMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
+I + R A ++ LGY+P+ L +L+N AV+ + M+ M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 254 GCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDA 312
G Q S TL+ + R ++ + + +L + I+V K G ID A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 313 MKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDT 372
+ +L + G + V IY+ + + +C +
Sbjct: 241 LSLLKK--------------------MEQGKIEPGVVIYNTI--------IDALCNYKNV 272
Query: 373 YSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEP 432
+ +FTE + + GIR +++ + ++R G DA +L M ++K I P
Sbjct: 273 NDALNLFTE-------MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INP 324
Query: 433 DAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVF 492
+ + ++ + + G L + LY +++K I + Y +IN +DE +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 493 DEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQN 551
+ M+ PN++T N ++ + KAK +LF + GLV + ++Y T+I + Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 552 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTY 611
+ ++ ++M DG + Y+ +LD G++E V ++ + D YTY
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 612 NIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRE 671
NIMI+ + G + + + L G++P++ +Y T++ + G+ E+A L +EM+E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 672 NGIEPDKITYTNMITA-LQRNDKFLEA 697
G PD TY +I A L+ DK A
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASA 591
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/593 (21%), Positives = 262/593 (44%), Gaps = 43/593 (7%)
Query: 112 EDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNME 171
+ + P++ + +L+A ++ K + + M+ G S N+ Y+ L+ + + S +
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 172 AAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLI 231
A + + +G EPD T S++ G+ +A ++ +GY+P++ TLI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 232 NLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLF 291
+ ++ AV +D M+ GCQ
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQP---------------------------------- 219
Query: 292 NLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDN--LYHLLICSCKDSGHLANAVK 349
+L + I+V K G ID A+ +L K+ + E +Y+ +I + + ++ +A+
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLL--KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 350 IYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYV 409
+++ M +PN+ ++I G +++A +L ++ I +++ F+ ++ +V
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 410 KAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQ 469
K G L +A + + M K + I+PD + Y ++ + LD+ +++ ++ N
Sbjct: 338 KEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSM 529
Y+ +I +A +DE +F EM Q G N +T ++ + +A+ + +F
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 530 AKKLG-LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ 588
G L D+++Y+ ++ N +E+ + +Q + YN M++ K G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 589 MENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNT 648
+E+ ++ + + TY M+ + +G E + E+KE G PD +YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 649 LIKAYGIAGMVEDAVGLVKEMRENGIEPDKIT---YTNMITALQRNDKFLEAI 698
LI+A+ G + L++EMR D T TNM+ + + FL+ +
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKML 629
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 126/578 (21%), Positives = 240/578 (41%), Gaps = 56/578 (9%)
Query: 174 QRLFLSIKDVGLEPDETTYRSMIEGWGRAG----NYREAKWYYKELKHLGYKPNASNLYT 229
+RLF +I G + +RS++ G G+ G ++ ++ ++ + Y ++
Sbjct: 2 RRLF-AISSTG---NRFVHRSLL-GKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINR 56
Query: 230 LINLHAKYEDEEGAVNTLDDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQH 288
L +L K +D AVN DM+ S + LL A K + D V + +
Sbjct: 57 LNDL--KLDD---AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111
Query: 289 VLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHL--LICSCKDSGHLAN 346
+ NL + SIL+ + + + A+ VL + +E ++ L L+ +++
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLA--KMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 347 AVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVR 406
AV + M +P+ T+I +EA L + G + DL+ + +VV
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 407 MYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGIT 466
K G + A ++L+ ME+ K IEP +Y ++ ++ L+ ++ GI
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 467 WNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKL 526
N Y+ +I C + SR+ +M++ PN++T + ++D + K KL
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 527 FS------------------------------------MAKKLGLVDVISYNTIIAAYGQ 550
+ M K +V++YNT+I + +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 551 NKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYT 610
K ++ +EM G + Y +++ + + + +N + V ++M D T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 611 YNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMR 670
Y+I++D G + + V L+ + PD+ +YN +I+ AG VED L +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 671 ENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIG 708
G++P+ +TYT M++ R EA MK+ G
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTR 96
F +M+ D PNV T+ L+ + K+ V+E F +M + GLV + Y+ +I + +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
+ A+ V + + D V+P++ + ++L+ GK+E A +V ++ + P+I
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
YN ++ G K +E LF S+ G++P+ TY +M+ G+ R G EA ++E+K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 217 HLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
G P++ TLI H + D+ + + +M
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 185/417 (44%), Gaps = 16/417 (3%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLM-GLYKKSWNVEEAEFAFNQM 76
FNTLI+ + M+ QP++ T+G+++ GL K+ + + A + +
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG----DIDLALSLL 244
Query: 77 RKL--GLVCESAYSAMITIYTRLSLYEKAEEVIRLIRE---DKVVPNLENWLVMLNAYSQ 131
+K+ G + E TI L Y+ + + L E + PN+ + ++
Sbjct: 245 KKMEQGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 132 QGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETT 191
G+ +A +L M E +PN+V ++ L+ + K + A++L+ + ++PD T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 192 YRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDML 251
Y S+I G+ EAK ++ + PN TLI K + + + +M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 252 NMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLID 310
G +++ TL+ + +A DN + K + VL ++ + SIL+ +G ++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 311 DAMKVLGDKRWKDTVFEDNL--YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCT 368
A+ V + + + E ++ Y+++I +G + + ++ + + KPN+ T
Sbjct: 484 TALVVF--EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 369 MIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETME 425
M+ + G+ EA+ L+ +K G D + ++R +++ G + ++ M
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
N +NTLI K V+ G + F M + + N T+ L+ + ++ + A+ F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 74 NQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQ 132
QM G++ + YS ++ E A V ++ K+ P++ + +M+ +
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
GK+E+ + S+ G PN+V Y T+M+G+ + E A LF +K+ G PD TY
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 193 RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINL 233
++I R G+ + +E++ + +AS + + N+
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 165/372 (44%), Gaps = 12/372 (3%)
Query: 344 LANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTV 403
L +AV ++ M P++ ++ + M F L +++ GI +L +++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 404 VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS 463
++ + + L A AVL M K EPD +L + + L ++++
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKR- 522
G + ++ +I+ R E + D M+ G P+++T ++++ L KR
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN-----GLCKRG 235
Query: 523 -VRKLFSMAKKL--GLVD--VISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYN 577
+ S+ KK+ G ++ V+ YNTII A KN+ + EM G ++ YN
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 578 SMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKEC 637
S++ G+ + +L M E + T++ +ID + ++G + E + E+ +
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 638 GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
+ PD+ +Y++LI + + +++A + + M P+ +TY +I + + E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 698 IKWSLWMKQIGL 709
++ M Q GL
Sbjct: 416 MELFREMSQRGL 427
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/560 (22%), Positives = 250/560 (44%), Gaps = 38/560 (6%)
Query: 134 KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYR 193
KL++A + M ++ P+I+ ++ L++ K++ + L ++++G+ + TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 194 SMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
+I + R A ++ LGY+PN L +L+N + + AV +D M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 254 GCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDA 312
G Q +++ TL+ + ++ + + +L + ++V K G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 313 MKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDT 372
+L + G L V IY+ T+ID
Sbjct: 241 FNLLNKM--------------------EQGKLEPGVLIYN---------------TIIDG 265
Query: 373 YSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEP 432
+A L+ +++ GIR +++ ++ ++ G DA +L M ++K I P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INP 324
Query: 433 DAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVF 492
D + + ++ + + G L + LY +++K I + Y +IN +DE ++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 493 DEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQN 551
+ M+ P+++T N ++ + K K + ++F + GLV + ++YN +I Q
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 552 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTY 611
+ + +EM DG ++ YN++LD K G++E V ++ + YTY
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 612 NIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRE 671
NIMI+ + G + + + L G++PD+ +YNT+I + G E+A L KEM+E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 672 NGIEPDKITYTNMITALQRN 691
+G P+ Y +I A R+
Sbjct: 565 DGTLPNSGCYNTLIRARLRD 584
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 229/532 (43%), Gaps = 13/532 (2%)
Query: 4 EVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKS 63
E +LG N ++ LI +R + L M++ +PN+ T L+ Y S
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 64 WNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV-----PN 118
+ EA +QM G + T+ L L+ KA E + LI D++V P+
Sbjct: 165 KRISEAVALVDQMFVTGY--QPNTVTFNTLIHGLFLHNKASEAMALI--DRMVAKGCQPD 220
Query: 119 LENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
L + V++N ++G + A +L M + P ++ YNT++ G K +M+ A LF
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
++ G+ P+ TY S+I G + +A ++ P+ LI+ K
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 239 DEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCS 297
A D+M+ S + +L+ + R D ++ + + +H ++ + +
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 298 ILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHIC 357
L+ + K+ +++ M+V + + V Y++LI +G A +I+ M +
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VS 459
Query: 358 DG-KPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKD 416
DG PN+ T++D G +A ++ L+ S + + + +++ KAG ++D
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 417 ACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVI 476
+ + K ++PD Y M+ + + G ++ L+ ++ + G N Y+ +I
Sbjct: 520 GWDLFCNLS-LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 477 NCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
R + + + EM GF + T+ ++ ++ +L K + S
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/572 (20%), Positives = 242/572 (42%), Gaps = 41/572 (7%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTR 96
F M++ P++ F L+ K + QM+ LG+ YS +I + R
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
S A V+ + + PN+ +LN Y ++ EA ++ M G+ PN V
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
+NTL+ G + A L + G +PD TY ++ G + G+ A +++
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 217 HLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTD 275
+P T+I+ KY+ + A+N +M G + + + +L+ GR
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 276 NVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI 335
+ R+L + + + ++ + S L+ A+VK
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKE----------------------------- 339
Query: 336 CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
G L A K+Y M P++ ++I+ + + EA++++ + S
Sbjct: 340 ------GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
D++ + +++ + K +++ V M Q+ + + Y +++ Q G D
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG 515
++ +++ G+ N Y+ +++ + +++ VF+ + + P I T N+M++
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 516 KAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE 574
KA + LF G+ DV++YNT+I+ + + + E + +EM+ DG +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTF 606
YN+++ A ++G E +++ M+ SC F
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMR--SCGF 602
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 166/374 (44%), Gaps = 16/374 (4%)
Query: 344 LANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTV 403
L +AV ++ M P++ ++ + M F L +++ GI + +++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 404 VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYL-------YCDMLRIYQQCGMLDKLSYL 456
++ + + L A AVL M K EP+ YC RI + ++D++
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 457 YYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGK 516
Y+ + +T+N ++ ++ A E + D M+ G P+++T V+++ K
Sbjct: 181 GYQ--PNTVTFNTLIHGLFLHNKA-----SEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 517 AKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEA 575
L + ++ L V+ YNTII + K+++ + +EM+ G ++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 576 YNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELK 635
Y+S++ G+ + +L M E D +T++ +ID + ++G + E + E+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 636 ECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFL 695
+ + P + +Y++LI + + +++A + + M PD +TY +I + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 696 EAIKWSLWMKQIGL 709
E ++ M Q GL
Sbjct: 414 EGMEVFREMSQRGL 427
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
Query: 483 LPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISY 541
L +D+ +F EM++ P+II + +L K F V L + LG+ + +Y
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 542 NTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKE 601
+ +I + + L + + +M G+ ++ +S+L+ Y ++ ++ +M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 602 TSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVED 661
T + T+N +I +E + ++ + G +PDL +Y ++ G +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 662 AVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
A L+ +M + +EP + Y +I L + +A+ M+ G++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 173/694 (24%), Positives = 302/694 (43%), Gaps = 72/694 (10%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEA-EFAFNQMRKLGLVCES-AYSAMITIYT 95
+ M+ +V P+V T +++ Y +S NV++A FA LGL Y+++I Y
Sbjct: 213 YDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 272
Query: 96 RLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIV 155
+ E V+RL+ E V N+ + ++ Y ++G +EEAE V ++E +
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 156 AYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKEL 215
Y LM GY + + A R+ ++ ++G+ + T S+I G+ ++G EA+ + +
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 216 KHLGYKPNASNLYTLIN--LHAKYEDEEGAVNTLDDMLNMGCQHSSI-----LGTLLQAY 268
KP+ TL++ A Y DE A+ D M CQ + LL+ Y
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDE--ALKLCDQM----CQKEVVPTVMTYNILLKGY 446
Query: 269 EKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFED 328
+ G +V + K L + V + SCS L+ A K G ++AMK+ W++ +
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL-----WENVLAR- 500
Query: 329 NLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLN 388
G L + + + MI M EA+++ N
Sbjct: 501 -------------GLLTDTITLN----------------VMISGLCKMEKVNEAKEILDN 531
Query: 389 LKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCG 448
+ + + + + Y K G+LK+A AV E ME+ K I P +Y ++ +
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER-KGIFPTIEMYNTLISGAFKYR 590
Query: 449 MLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLN 508
L+K++ L ++ G+T Y +I ID+ EM++ G ITLN
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG-----ITLN 645
Query: 509 VMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKN-LESMSSTVQEMQFD 567
V + LF R+ K+ L L ++ ++ ++ Y K LE+ ++T + Q
Sbjct: 646 VNICSKIANSLF-RLDKIDEAC--LLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 702
Query: 568 GFSVSLEA-----------YNSMLDAYGKEGQMENFKNVLRRMKETSCTF-DHYTYNIMI 615
SV YN + K G++E+ + + + + D YTY I+I
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 616 DIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIE 675
G IN+ + E+ G+ P++ +YN LIK G V+ A L+ ++ + GI
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 676 PDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
P+ ITY +I L ++ EA++ M + GL
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 123/545 (22%), Positives = 221/545 (40%), Gaps = 33/545 (6%)
Query: 169 NMEAAQRLF-LSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNL 227
N EA +F L+ K PD Y M+ RA NY++ K Y EL L N S
Sbjct: 83 NPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVAL----NHSGF 138
Query: 228 YTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVP--------- 278
L +++ + D +L + + ++ L ++ G +P
Sbjct: 139 VVWGELVRVFKEFSFSPTVFDMILKVYAE-KGLVKNALHVFDNMGNYGRIPSLLSCNSLL 197
Query: 279 --RILKGSLY-------QHVLFNLT----SCSILVMAYVKHGLIDDAMKVLGDKRWKDTV 325
+ KG + Q + F ++ +CSI+V AY + G +D AM V +
Sbjct: 198 SNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLG 256
Query: 326 FEDNL--YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAE 383
E N+ Y+ LI G + ++ M N+ ++I Y G+ EAE
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 384 KLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRI 443
++ LK + D + V++ Y + G ++DA V + M + + + + ++
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM-IEIGVRTNTTICNSLING 375
Query: 444 YQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPN 503
Y + G L + ++ ++ + + Y+ +++ RA +DE ++ D+M Q P
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 504 IITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQ 562
++T N++L Y + F V L+ M K G+ D IS +T++ A + + +
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
+ G N M+ K ++ K +L + C TY + Y + G
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 623 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYT 682
+ E V ++ G+ P + YNTLI + LV E+R G+ P TY
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615
Query: 683 NMITA 687
+IT
Sbjct: 616 ALITG 620
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 8/221 (3%)
Query: 491 VFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKK----LGL-VDVISYNTII 545
V+D+M+ +P++ T +++++ Y ++ V K AK+ LGL ++V++YN++I
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSG---NVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 546 AAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCT 605
Y ++E M+ ++ M G S ++ Y S++ Y K+G ME ++V +KE
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 606 FDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGL 665
D + Y +++D Y G I + V V + E G+R + N+LI Y +G + +A +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 666 VKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQ 706
M + ++PD TY ++ R EA+K M Q
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/503 (20%), Positives = 218/503 (43%), Gaps = 11/503 (2%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
+ +G + N + N+LI K G + + F M + ++P+ T+ L+ Y ++ V
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 67 EEAEFAFNQM-RKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
+EA +QM +K + Y+ ++ Y+R+ + + +++ + V + + +
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 126 LNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGL 185
L A + G EA + ++ G + + N +++G K+ + A+ + ++
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVN 245
+P TY+++ G+ + GN +EA + ++ G P TLI+ KY +
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 246 TLDDMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYV 304
+ ++ G + + G L+ + G D + + + N+ CS + +
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 305 KHGLIDDAMKVLGDKRWKDTVFE--DNLYHLLICS---CKDSGHLANAVKIYSHMHICDG 359
+ ID+A +L D + +L L S C + +A +V+ + +
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLL-- 715
Query: 360 KPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRL-DLIAFTVVVRMYVKAGSLKDAC 418
PN + I G +A KL+ +L SS + D +T+++ AG + A
Sbjct: 716 VPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAF 775
Query: 419 AVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINC 478
+ + M K I P+ Y +++ + G +D+ L +K+ + GIT N Y+ +I+
Sbjct: 776 TLRDEM-ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 479 CARALPIDELSRVFDEMLQHGFT 501
++ + E R+ ++M++ G
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLV 857
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 48/311 (15%)
Query: 416 DAC-AVLETMEKQKDIEPDAYLYCDMLRI------YQQCGMLDKLSYL--YYKILKSG-I 465
+AC + KQ+ PD YC M+ I YQQ SYL + SG +
Sbjct: 85 EACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTK-----SYLCELVALNHSGFV 139
Query: 466 TWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRK 525
W EL RVF E F+P + +++L +Y + L K
Sbjct: 140 VWG------------------ELVRVFKEF---SFSPTV--FDMILKVYAEKGLVKNALH 176
Query: 526 LFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNS--MLDAY 583
+F G + + + + K ++ V + Q F VS + + +++AY
Sbjct: 177 VFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD-QMISFEVSPDVFTCSIVVNAY 235
Query: 584 GKEGQMENFKNVLRRMKETSCTF----DHYTYNIMIDIYGEQGWINEVVGVLTELKECGL 639
+ G N + KET + + TYN +I+ Y G + + VL + E G+
Sbjct: 236 CRSG---NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGV 292
Query: 640 RPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
++ +Y +LIK Y G++E+A + + ++E + D+ Y ++ R + +A++
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 700 WSLWMKQIGLQ 710
M +IG++
Sbjct: 353 VHDNMIEIGVR 363
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 103 AEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAG-FSPNIVAYNTLM 161
AE V + +VPN + V + + GKLE+A + + + F P+ Y L+
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 162 TGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYK 221
G ++ A L + G+ P+ TY ++I+G + GN A+ +L G
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 222 PNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPR 279
PNA TLI+ K + A+ + M+ G L++ +K G D +P+
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG---------LVRGSDKQGDVD-IPK 870
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 153/722 (21%), Positives = 313/722 (43%), Gaps = 81/722 (11%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
S G ++N + FN L+ A +K + + MLE DV P + + ++
Sbjct: 156 SFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLT 215
Query: 68 EAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEK------------------------- 102
EA+ +++M +G+ ++ + ++ R SL E+
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLM---RASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 103 --------------AEEVIRLIREDKV-VPNLENWLVMLNAYSQQGKLEEAELVLVSMRE 147
A ++R ++E K+ VP+ E + ++ A +QG +++A + M
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332
Query: 148 AGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYRE 207
G S N+VA +L+TG+ K +++ +A LF ++ G P+ T+ +IE + + G +
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 208 AKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQA 267
A +YK+++ LG P+ +++T+I K + E A+ D+ G + + T+L
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW 452
Query: 268 YEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFE 327
K G+TD +L + + N+ S + +++ + + +D A V + K
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Query: 328 DNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
+ Y +LI C + NA+++ +HM + + N + T+I+ +G ++A +L
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Query: 388 NL-KSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQ 446
N+ + + + +++ ++ + K G + A A E M
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM---------------------- 610
Query: 447 CGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIIT 506
CG +GI+ N Y ++N + +D+ + DEM G +I
Sbjct: 611 CG--------------NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 507 LNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVIS-YNTIIAAYGQNKNLESMSSTVQEMQ 565
++D + K + LFS + GL YN++I+ + N+ + ++M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 566 FDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWIN 625
DG L Y +++D K+G + + M+ D Y ++++ ++G
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 626 EVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
+VV + E+K+ + P++ YN +I + G +++A L EM + GI PD T+ ++
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 686 TA 687
+
Sbjct: 837 SG 838
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 238/529 (44%), Gaps = 13/529 (2%)
Query: 2 IREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYK 61
+++ +S G +N +LI K + F M + PN TF +L+ ++
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 62 KSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLEN 121
K+ +E+A + +M LGL S + I L +K EE ++L E L N
Sbjct: 386 KNGEMEKALEFYKKMEVLGLT-PSVFHVHTIIQGWLK-GQKHEEALKLFDE-SFETGLAN 442
Query: 122 WLV---MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
V +L+ +QGK +EA +L M G PN+V+YN +M G+ + NM+ A+ +F
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
+I + GL+P+ TY +I+G R + + A + + N T+IN K
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 239 DEEGAVNTLDDMLNMG--CQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSC 296
A L +M+ C +++ + K G D+ + + N+ +
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 297 SILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICS-CKDSGHLANAVKIYSHMH 355
+ L+ K+ +D A+++ + + K + Y LI CK S ++ +A ++S +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS-NMESASALFSELL 681
Query: 356 ICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLK 415
P+ I ++I + +G A LY + G+R DL +T ++ +K G+L
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCV 475
A + M+ + PD +Y ++ + G K+ ++ ++ K+ +T N +Y+ V
Sbjct: 742 LASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 476 INCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVR 524
I R +DE R+ DEML G P+ T +++ + G+ + VR
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL--VSGQVGNLQPVR 847
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/591 (21%), Positives = 261/591 (44%), Gaps = 10/591 (1%)
Query: 125 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
+LNAYS+ + + A ++ M E P N ++ + +++ A+ L+ + +G
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG 228
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTL-INLHAKYEDEEGA 243
++ D T + ++ R EA G +P+ S LY+L + K D A
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD-SLLYSLAVQACCKTLDLAMA 287
Query: 244 VNTLDDML--NMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVM 301
+ L +M + +++ A K G D+ R+ L + N+ + + L+
Sbjct: 288 NSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT 347
Query: 302 AYVKHGLIDDAMKVLGDKRWKDTVFEDNL-YHLLICSCKDSGHLANAVKIYSHMHICDGK 360
+ K+ + A+ VL DK K+ +++ + +LI + +G + A++ Y M +
Sbjct: 348 GHCKNNDLVSAL-VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 361 PNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAV 420
P++ + T+I + EA KL+ +G+ ++ ++ K G +A +
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATEL 465
Query: 421 LETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCA 480
L ME + I P+ Y +++ + + +D ++ IL+ G+ N Y +I+ C
Sbjct: 466 LSKME-SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 481 RALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS--MAKKLGLVDV 538
R V + M N + +++ K + R+L + + +K V
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 539 ISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRR 598
+SYN+II + + ++S + +EM +G S ++ Y S+++ K +M+ +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 599 MKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGM 658
MK D Y +ID + ++ + + +EL E GL P YN+LI + G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 659 VEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
+ A+ L K+M ++G+ D TYT +I L ++ + A + M+ +GL
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 8/216 (3%)
Query: 488 LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISY-NTIIA 546
+S++ D GF N N +L+ Y K + + + +L ++ Y N ++
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 547 AYGQNKNL---ESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETS 603
A Q +L + + S + + DG +V+ + ++ A +E + VL R E
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQL---LMRASLREEKPAEALEVLSRAIERG 263
Query: 604 CTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGL-RPDLCSYNTLIKAYGIAGMVEDA 662
D Y++ + + + +L E+KE L P +Y ++I A G ++DA
Sbjct: 264 AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA 323
Query: 663 VGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAI 698
+ L EM +GI + + T++IT +N+ + A+
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 252/567 (44%), Gaps = 39/567 (6%)
Query: 134 KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYR 193
KL+EA + M ++ P+IV ++ L++ K+ + ++ +G+ + TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 194 SMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
MI R A ++ LGY P+ L +L+N AV +D M+ M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 254 GCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDA 312
G Q ++ TL+ + + +++ + + +L + ++ K G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 313 MKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDT 372
+ +L + G + V IYS T+ID+
Sbjct: 225 LNLLNKM--------------------EKGKIEADVVIYS---------------TVIDS 249
Query: 373 YSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEP 432
+A L+ + + GIR D+ ++ ++ G DA +L M ++K I P
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INP 308
Query: 433 DAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVF 492
+ + ++ + + G L + L+ ++++ I N Y+ +IN +DE ++F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 493 DEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQN 551
M+ P+++T N +++ + KAK +LF + GLV + ++Y T+I + Q
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 552 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTY 611
+ ++ ++M DG ++ YN++LD K G++E V ++++ D YTY
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 612 NIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRE 671
NIM + + G + + + L G++PD+ +YNT+I + G+ E+A L +M+E
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 672 NGIEPDKITYTNMITA-LQRNDKFLEA 697
+G PD TY +I A L+ DK A
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASA 575
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/556 (21%), Positives = 235/556 (42%), Gaps = 12/556 (2%)
Query: 99 LYEKAEEVIRLIRE---DKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIV 155
L+ K +E + L E + P++ + +L+A ++ K + M G S N+
Sbjct: 42 LHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 156 AYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKEL 215
YN ++ + S + A + + +G P T S++ G+ EA ++
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 216 KHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRT 274
+GY+P+ TL++ ++ AV ++ M+ GCQ + G ++ K G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 275 DNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV---LGDKRWKDTVFEDNLY 331
D +L + ++ S ++ + K+ +DDA+ + + +K + VF Y
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT---Y 278
Query: 332 HLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKS 391
LI + G ++A ++ S M PN+ ++ID ++ G EAEKL+ +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 392 SGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLD 451
I +++ + ++ + L +A + T+ KD PD Y ++ + + +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 452 KLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVML 511
L+ + + G+ N Y +I+ +A D VF +M+ G PNI+T N +L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 512 DIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFS 570
D K ++ +F +K + D+ +YN + + +E + G
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 571 VSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGV 630
+ AYN+M+ + K+G E + +MKE D TYN +I + G +
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 631 LTELKECGLRPDLCSY 646
+ E++ C D +Y
Sbjct: 578 IKEMRSCRFAGDASTY 593
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/526 (20%), Positives = 220/526 (41%), Gaps = 11/526 (2%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
LG N +N +I +R + M++ P++ T L+ + + E
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 69 AEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV----PNLENWLV 124
A +QM ++G ++ T+ L + KA E + L+ E VV P+L +
Sbjct: 154 AVALVDQMVEMGYQPDTV--TFTTLVHGLFQHNKASEAVALV-ERMVVKGCQPDLVTYGA 210
Query: 125 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
++N ++G+ + A +L M + ++V Y+T++ K +++ A LF + + G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAV 244
+ PD TY S+I G + +A ++ PN +LI+ AK A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 245 NTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
D+M+ + + +L+ + R D +I + + L ++ + + L+ +
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG-KPN 362
K + D M++ D + V Y LI + NA ++ M + DG PN
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM-VSDGVHPN 449
Query: 363 LHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLE 422
+ T++D G +A ++ L+ S + D+ + ++ KAG ++D +
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 423 TMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARA 482
++ K ++PD Y M+ + + G+ ++ L+ K+ + G + Y+ +I R
Sbjct: 510 SLS-LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 483 LPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
+ + EM F + T ++ D+ +L K ++ S
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 116/585 (19%), Positives = 242/585 (41%), Gaps = 43/585 (7%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCE-SAYSAMITIYTR 96
F M++ P++ F L+ K + +M LG+ Y+ MI R
Sbjct: 53 FGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCR 112
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
S A ++ + + P++ +LN + ++ EA ++ M E G+ P+ V
Sbjct: 113 RSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
+ TL+ G + + A L + G +PD TY ++I G + G A +++
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 217 HLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTD 275
+ + T+I+ KY + A+N +M N G + +L+ GR
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 276 NVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI 335
+ R+L L + + N+ + + L+ A+ K
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKE----------------------------- 323
Query: 336 CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
G L A K++ M PN+ ++I+ + + EA++++ + S
Sbjct: 324 ------GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
D++ + ++ + KA + D + M + + + + Y ++ + Q D
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG 515
++ +++ G+ N Y+ +++ + +++ VF+ + + P+I T N+M +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 516 KAKLFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE 574
KA + LF S++ K DVI+YNT+I+ + + E + +M+ DG
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTF--DHYTYNIMIDI 617
YN+++ A+ ++G +++ M+ SC F D TY ++ D+
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMR--SCRFAGDASTYGLVTDM 599
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRV 523
G++ N Y+ +INC R + + +M++ G+ P+I+TLN +L+ +
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 524 RKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDA 582
L ++G D +++ T++ Q+ + V+ M G L Y ++++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 583 YGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPD 642
K G+ + N+L +M++ D Y+ +ID + +++ + + TE+ G+RPD
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 643 LCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
+ +Y++LI G DA L+ +M E I P+ +T+ ++I A + K +EA K
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/324 (18%), Positives = 143/324 (44%), Gaps = 14/324 (4%)
Query: 393 GIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK----QKDIEPDAYL--YCDMLRIYQQ 446
G+ +L + +++ + L A A+L M K + ++ L +C RI +
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 447 CGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIIT 506
++D++ ++ G + + +++ + E + + M+ G P+++T
Sbjct: 155 VALVDQM-------VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 507 LNVMLD-IYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQ 565
+++ + + + + L M K DV+ Y+T+I + + ++++ + EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 566 FDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWIN 625
G + Y+S++ G+ + +L M E + T+N +ID + ++G +
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 626 EVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
E + E+ + + P++ +YN+LI + + +++A + M PD +TY +I
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 686 TALQRNDKFLEAIKWSLWMKQIGL 709
+ K ++ ++ M + GL
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGL 411
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 72/139 (51%)
Query: 572 SLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVL 631
S+ ++ +L A K + + + +M+ + + YTYNIMI+ + ++ + +L
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
++ + G P + + N+L+ + + +AV LV +M E G +PD +T+T ++ L ++
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 692 DKFLEAIKWSLWMKQIGLQ 710
+K EA+ M G Q
Sbjct: 184 NKASEAVALVERMVVKGCQ 202
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
M+ + +S G N +NTL+ K G +E F + + ++P++ T+ ++
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 61 KKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNL 119
K+ VE+ F + G+ + AY+ MI+ + + L E+A + ++ED +P+
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 120 ENWLVMLNAYSQQG-KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRL 176
+ ++ A+ + G K AEL+ MR F+ + + YG V++M RL
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELI-KEMRSCRFAGD-------ASTYGLVTDMLHDGRL 605
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 192/385 (49%), Gaps = 8/385 (2%)
Query: 329 NLYHLLICSCKDSGHLANAVKIYSHMHI---CDGKPNLHIMCTMIDTYSVMGMFTEAEKL 385
N + L+ G +++++ +M C KPN HI MI G+ + ++
Sbjct: 106 NDFALVFKEFAGRGDWQRSLRLFKYMQRQIWC--KPNEHIYTIMISLLGREGLLDKCLEV 163
Query: 386 YLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQ 445
+ + S G+ + ++T ++ Y + G + + +L+ M+ +K I P Y ++
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK-ISPSILTYNTVINACA 222
Query: 446 QCGM-LDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
+ G+ + L L+ ++ GI + Y+ +++ CA DE VF M G P++
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 505 ITLNVMLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQE 563
T + +++ +GK + ++V L MA L D+ SYN ++ AY ++ +++ +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 564 MQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGW 623
MQ G + + Y+ +L+ +G+ G+ ++ + + MK ++ D TYNI+I+++GE G+
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 624 INEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTN 683
EVV + ++ E + PD+ +Y +I A G G+ EDA +++ M N I P YT
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 684 MITALQRNDKFLEAIKWSLWMKQIG 708
+I A + + EA+ M ++G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVG 487
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/581 (20%), Positives = 252/581 (43%), Gaps = 5/581 (0%)
Query: 84 ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLV 143
E Y+ MI++ R L +K EV + V ++ ++ ++NAY + G+ E + +L
Sbjct: 141 EHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLD 200
Query: 144 SMREAGFSPNIVAYNTLMTGYGKVS-NMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRA 202
M+ SP+I+ YNT++ + + E LF ++ G++PD TY +++
Sbjct: 201 RMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIR 260
Query: 203 GNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHS-SIL 261
G EA+ ++ + G P+ + L+ K E + L +M + G +
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 262 GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRW 321
LL+AY K+G + N + S+L+ + + G DD ++ + +
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 322 KDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTE 381
+T + Y++LI + G+ V ++ M + +P++ +I G+ +
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A K+ + ++ I A+T V+ + +A ++A TM + P + +L
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS-NPSIETFHSLL 499
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
+ + G++ + + +++ SGI N++ ++ I + +E + + +M +
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLG-LVDVISYNTIIAAYGQNKNLESMSST 560
P+ TL +L +Y A+L R+ F K L ++ Y ++A YG+ + + ++
Sbjct: 560 PDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNEL 619
Query: 561 VQEMQFDGFSVSLEAYNSMLDA-YGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYG 619
++EM + S + M+ Y + + + VL ++ C YN ++D
Sbjct: 620 LEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALW 679
Query: 620 EQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVE 660
G VL E + GL P+L N L+ + + M E
Sbjct: 680 WLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSE 720
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 158/330 (47%), Gaps = 37/330 (11%)
Query: 395 RLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLS 454
+L L F +V + + G + + + + M++Q +P+ ++Y M+ + + G+LDK
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 455 YLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIY 514
++ ++ G++ + Y +IN R + + D M +P+I+T N +++
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 515 GKAKL-FKRVRKLFSMAKKLGL-VDVISYNTIIAA------------------------- 547
+ L ++ + LF+ + G+ D+++YNT+++A
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 548 ----------YGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLR 597
+G+ + LE + + EM G + +YN +L+AY K G ++ V
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 598 RMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAG 657
+M+ CT + TY+++++++G+ G ++V + E+K PD +YN LI+ +G G
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 658 MVEDAVGLVKEMRENGIEPDKITYTNMITA 687
++ V L +M E IEPD TY +I A
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 187/405 (46%), Gaps = 3/405 (0%)
Query: 297 SILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHI 356
+I++ + GL+D ++V + + Y LI + +G ++++ M
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 357 CDGKPNLHIMCTMIDTYSVMGMFTEAE-KLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLK 415
P++ T+I+ + G+ E L+ ++ GI+ D++ + ++ G
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCV 475
+A V TM I PD Y ++ + + L+K+ L ++ G + Y+ +
Sbjct: 265 EAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 476 INCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLF-SMAKKLG 534
+ A++ I E VF +M G TPN T +V+L+++G++ + VR+LF M
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 535 LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKN 594
D +YN +I +G+ + + + +M + +E Y ++ A GK G E+ +
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 595 VLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYG 654
+L+ M Y +I+ +G+ E + + E G P + ++++L+ ++
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 655 IAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
G+V+++ ++ + ++GI ++ T+ I A ++ KF EA+K
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 234/568 (41%), Gaps = 11/568 (1%)
Query: 117 PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRL 176
PN + +M++ ++G L++ V M G S ++ +Y L+ YG+ E + L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 177 FLSIKDVGLEPDETTYRSMIEGWGRAG-NYREAKWYYKELKHLGYKPNASNLYTLIN--- 232
+K+ + P TY ++I R G ++ + E++H G +P+ TL++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 233 LHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFN 292
+ ++ E T++D + L++ + K R + V +L L +
Sbjct: 259 IRGLGDEAEMVFRTMND--GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 293 LTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYS 352
+TS ++L+ AY K G I +AM V + N Y +L+ SG + +++
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 353 HMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAG 412
M + P+ +I+ + G F E L+ ++ I D+ + ++ K G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 413 SLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELY 472
+DA +L+ M DI P + Y ++ + Q + ++ + + + G + E +
Sbjct: 437 LHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 473 DCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLF-SMAK 531
++ AR + E + ++ G N T N ++ Y + F+ K + M K
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 532 KLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMEN 591
D + +++ Y + ++ +EM+ S+ Y ML YGK + ++
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 615
Query: 592 FKNVLRRMKETSCTFDHYTYNIMI--DIYGEQGWINEVVGVLTELKECGLRPDLCSYNTL 649
+L M + H MI D + W V VL +L G + YN L
Sbjct: 616 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNW-QIVEYVLDKLNSEGCGLGIRFYNAL 674
Query: 650 IKAYGIAGMVEDAVGLVKEMRENGIEPD 677
+ A G E A ++ E + G+ P+
Sbjct: 675 LDALWWLGQKERAARVLNEATKRGLFPE 702
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/498 (20%), Positives = 217/498 (43%), Gaps = 4/498 (0%)
Query: 200 GRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSS 259
GR R + + + + KPN +I+L + + + D+M + G S
Sbjct: 117 GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSV 176
Query: 260 ILGT-LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLI-DDAMKVLG 317
T L+ AY + GR + +L + + ++ + + ++ A + GL + + +
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 318 DKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMG 377
+ R + + Y+ L+ +C G A ++ M+ P+L +++T+ +
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 378 MFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLY 437
+ L + S G D+ ++ V++ Y K+GS+K+A V M+ P+A Y
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTY 355
Query: 438 CDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQ 497
+L ++ Q G D + L+ ++ S + Y+ +I E+ +F +M++
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 498 HGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVI-SYNTIIAAYGQNKNLES 556
P++ T ++ GK L + RK+ +V +Y +I A+GQ E
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE 475
Query: 557 MSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 616
M G + S+E ++S+L ++ + G ++ + +L R+ ++ + T+N I+
Sbjct: 476 ALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE 535
Query: 617 IYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEP 676
Y + G E V ++++ PD + ++ Y A +V++ +EM+ + I P
Sbjct: 536 AYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Query: 677 DKITYTNMITALQRNDKF 694
+ Y M+ + +++
Sbjct: 596 SIMCYCMMLAVYGKTERW 613
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 225/522 (43%), Gaps = 53/522 (10%)
Query: 18 FNTLIYACNKRGCVELGA-KWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQM 76
+NT+I AC + G G F M +QP++ T+ L+ +EAE F M
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 77 RKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKL 135
G+V + + YS ++ + +L EK +++ + +P++ ++ V+L AY++ G +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 136 EEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSM 195
+EA V M+ AG +PN Y+ L+ +G+ + ++LFL +K +PD TY +
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 196 IEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK---YEDEEGAVN--TLDDM 250
IE +G G ++E + ++ +P+ +I K +ED + T +D+
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 251 LNMGCQHSSILGTLLQA--YEKAGRTDNVPRILKGSLYQHVLFN--LTSCSILVMAYVKH 306
+ ++ ++ QA YE+A ++ + V N + + L+ ++ +
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEA--------LVAFNTMHEVGSNPSIETFHSLLYSFARG 505
Query: 307 GLIDDAMKVL------GDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGK 360
GL+ ++ +L G R +DT ++ I + K G AVK Y M
Sbjct: 506 GLVKESEAILSRLVDSGIPRNRDT------FNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 361 PNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAV 420
P+ + ++ YS + E + + +K+S I ++ + +++ +Y K D +
Sbjct: 560 PDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNEL 619
Query: 421 LETMEKQKDIEPDAYLYCDMLRIYQQCGMLDK-----------LSYLYYKILKSGITWNQ 469
LE M L + I+Q G + K + Y+ K+ G
Sbjct: 620 LEEM-----------LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGI 668
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVML 511
Y+ +++ + +RV +E + G P + N ++
Sbjct: 669 RFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 128/307 (41%), Gaps = 11/307 (3%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
+ + + +I+AC K G E K M D+ P+ + ++ + ++ EEA AF
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480
Query: 74 NQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQ 132
N M ++G + +++ + R L +++E ++ + + + N + + + AY Q
Sbjct: 481 NTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQG 540
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
GK EEA V M ++ P+ +++ Y ++ + F +K + P Y
Sbjct: 541 GKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCY 600
Query: 193 RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLIN--LHAKYEDEEG---AVNTL 247
M+ +G+ + + +E+ SN++ +I + Y+D+ L
Sbjct: 601 CMMLAVYGKTERWDDVNELLEEM----LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVL 656
Query: 248 DDMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKH 306
D + + GC LL A G+ + R+L + + + L + LV + H
Sbjct: 657 DKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVH 716
Query: 307 GLIDDAM 313
+ + M
Sbjct: 717 RMSEGGM 723
Score = 39.7 bits (91), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
+G+ + + F++L+Y+ + G V+ +++ + N TF + YK+ EE
Sbjct: 486 VGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEE 545
Query: 69 AEFAFNQMRKLGLVC---ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
A + M K C E A++++Y+ L ++ E ++ ++P++ + +M
Sbjct: 546 AVKTYVDMEK--SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMM 603
Query: 126 LNAYSQQGKLEEAELVLVSM 145
L Y + + ++ +L M
Sbjct: 604 LAVYGKTERWDDVNELLEEM 623
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 257/590 (43%), Gaps = 13/590 (2%)
Query: 73 FNQMRKLGLVCESAYSAM----ITIYTRLS---LYEKAEEVIRLIRE---DKVVPNLENW 122
N +L CE +SA ++ RL + KA++ I L R+ + +P + ++
Sbjct: 32 INCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDF 91
Query: 123 LVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKD 182
+ +A ++ + + + M G + N+ + ++ + + + A I
Sbjct: 92 SRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK 151
Query: 183 VGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEG 242
+G EP+ T+ ++I G G EA + +G+KP+ + TL+N E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 243 AVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVM 301
A+ +D M+ GCQ +++ G +L K+G+T +L+ +++ + SI++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 302 AYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKP 361
KHG +D+A + + K Y++LI ++G + K+ M P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 362 NLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVL 421
N+ +ID++ G EAE+L+ + GI D I +T ++ + K L A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 422 ETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCAR 481
+ M K +P+ + ++ Y + +D L+ K+ G+ + Y+ +I
Sbjct: 392 DLM-VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 482 ALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVIS 540
++ +F EM+ PNI+T ++LD ++ ++F +K + +D+
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
YN II ++ + G ++ YN M+ K+G + + + R+M+
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLI 650
E D +TYNI+I + G + V ++ ELK CG D + +I
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/561 (20%), Positives = 228/561 (40%), Gaps = 38/561 (6%)
Query: 152 PNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWY 211
P ++ ++ L + K + L ++ G+ + T MI + R A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 212 YKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSI-LGTLLQAYEK 270
++ LGY+PN TLIN A+ +D M+ MG + I + TL+
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 271 AGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNL 330
+G+ ++ + N + ++ K G AM++L ++ +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 331 YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLK 390
Y ++I G L NA +++ M +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEM---------------------------------- 291
Query: 391 SSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGML 450
GI ++I + +++ + AG D +L M K+K I P+ + ++ + + G L
Sbjct: 292 -KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKL 349
Query: 451 DKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVM 510
+ L+ +++ GI + Y +I+ + +D+ +++ D M+ G PNI T N++
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 511 LDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGF 569
++ Y KA +LF G+V D ++YNT+I + + L QEM
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 570 SVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVG 629
++ Y +LD G+ E + +++++ D YNI+I +++
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 630 VLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQ 689
+ L G++P + +YN +I G + +A L ++M E+G PD TY +I A
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 690 RNDKFLEAIKWSLWMKQIGLQ 710
+ +++K +K+ G
Sbjct: 590 GDGDATKSVKLIEELKRCGFS 610
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 202/475 (42%), Gaps = 7/475 (1%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
+ LG + N F+TLI G V + M+E +P++ T L+ S
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 67 EEAEFAFNQMRKLGLVCES---AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWL 123
EA ++M + G C+ Y ++ + + A E++R + E + + +
Sbjct: 210 AEAMLLIDKMVEYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
++++ + G L+ A + M G + NI+ YN L+ G+ + +L +
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
+ P+ T+ +I+ + + G REA+ +KE+ H G P+ +LI+ K + A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 244 VNTLDDMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMA 302
+D M++ GC + L+ Y KA R D+ + + + V+ + + + L+
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 303 YVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPN 362
+ + G ++ A ++ + + Y +L+ D+G A++I+ + + +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 363 LHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLE 422
+ I +I +A L+ +L G++ + + +++ K G L +A +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 423 TMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVIN 477
ME+ PD + Y ++R + G K L ++ + G + + VI+
Sbjct: 568 KMEEDGH-APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 107/252 (42%), Gaps = 36/252 (14%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+ +LI K ++ + +M+ PN+ TF +L+ Y K+ +++ F +M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 78 KLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
G+V ++ Y+ +I + L A+E+ + + KV PN+ + ++L+ G+ E
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 137 EA------------EL-----------------------VLVSMREAGFSPNIVAYNTLM 161
+A EL + S+ G P + YN ++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 162 TGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYK 221
G K + A+ LF +++ G PD TY +I G+ ++ +ELK G+
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 222 PNASNLYTLINL 233
+AS + +I++
Sbjct: 611 VDASTIKMVIDM 622
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/558 (23%), Positives = 250/558 (44%), Gaps = 18/558 (3%)
Query: 96 RLSLYEKAEEVIRLIRE---DKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSP 152
RLS K ++ + L + + P++ + +L+A ++ K E + M+ G S
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 153 NIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYY 212
++ Y+ + + + S + A + + +G EPD T S++ G+ + +A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 213 KELKHLGYKPNASNLYTLIN---LHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAY 268
++ +GYKP+ TLI+ LH K + AV +D M+ GCQ + GT++
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASE---AVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 269 EKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV---LGDKRWKDTV 325
K G D +LK + ++ + ++ K+ +DDA+ + + +K + V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 326 FEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKL 385
F Y LI + G ++A ++ S M PN+ +ID + G EAEKL
Sbjct: 294 FT---YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 386 YLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQ 445
Y + I D+ ++ ++ + L +A + E M KD P+ Y +++ +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYSTLIKGFC 409
Query: 446 QCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNII 505
+ +++ L+ ++ + G+ N Y +I+ +A D VF +M+ G PNI+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 506 TLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEM 564
T N++LD K + +F ++ + D+ +YN +I + +E +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 565 QFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWI 624
G S ++ AYN+M+ + ++G E ++L++MKE + TYN +I G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 625 NEVVGVLTELKECGLRPD 642
++ E++ CG D
Sbjct: 590 EASAELIKEMRSCGFAGD 607
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/582 (21%), Positives = 264/582 (45%), Gaps = 10/582 (1%)
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
++ N S K+++A + M ++ P+IV +N L++ K++ E L ++ +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
G+ D TY I + R A ++ LGY+P+ L +L+N + + A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 244 VNTLDDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMA 302
V +D M+ MG + + TL+ + ++ + + +L + +V
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 303 YVKHGLIDDAMKVLGDKRWKDTVFEDN--LYHLLICSCKDSGHLANAVKIYSHMHICDGK 360
K G ID A+ +L K+ + E + +Y+ +I H+ +A+ +++ M +
Sbjct: 233 LCKRGDIDLALSLL--KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 361 PNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAV 420
P++ ++I G +++A +L ++ I +++ F+ ++ +VK G L +A +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 421 LETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCA 480
+ M K + I+PD + Y ++ + LD+ +++ ++ N Y +I
Sbjct: 351 YDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 481 RALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVI 539
+A ++E +F EM Q G N +T ++ + +A+ + +F +G+ +++
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 540 SYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRM 599
+YN ++ +N L + +Q + YN M++ K G++E+ + +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 600 KETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMV 659
+ + YN MI + +G E +L ++KE G P+ +YNTLI+A G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 660 EDAVGLVKEMRENGIEPDKIT---YTNMITALQRNDKFLEAI 698
E + L+KEMR G D T TNM+ + + FL+ +
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/579 (19%), Positives = 246/579 (42%), Gaps = 41/579 (7%)
Query: 31 VELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCE-SAYSA 89
V+ F M++ P++ F L+ K E QM+ LG+ + YS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 90 MITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAG 149
I + R S A V+ + + P++ +LN Y ++ +A ++ M E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 150 FSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAK 209
+ P+ + TL+ G + A L + G +PD TY +++ G + G+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 210 WYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAY 268
K+++ + + T+I+ KY+ + A+N +M N G + +L+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 269 EKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFED 328
GR + R+L + + + N+ + S L+ A+VK
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE---------------------- 341
Query: 329 NLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLN 388
G L A K+Y M P++ ++I+ + + EA+ ++
Sbjct: 342 -------------GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 389 LKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCG 448
+ S +++ ++ +++ + KA +++ + M Q+ + + Y ++ + Q
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYTTLIHGFFQAR 447
Query: 449 MLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLN 508
D ++ +++ G+ N Y+ +++ + + + VF+ + + P+I T N
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 509 VMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFD 567
+M++ KA + +LF G+ +VI+YNT+I+ + + + E S +++M+ D
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 568 GFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTF 606
G + YN+++ A ++G E +++ M+ SC F
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMR--SCGF 604
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/531 (19%), Positives = 218/531 (41%), Gaps = 11/531 (2%)
Query: 4 EVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKS 63
E +LG + ++ I +R + L M++ +P++ T L+ Y S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 64 WNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV-----PN 118
+ +A +QM ++G ++ T+ L L+ KA E + L+ D++V P+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTF--TFTTLIHGLFLHNKASEAVALV--DQMVQRGCQPD 222
Query: 119 LENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
L + ++N ++G ++ A +L M + ++V YNT++ G K +M+ A LF
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
+ + G+ PD TY S+I G + +A ++ PN LI+ K
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Query: 239 DEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCS 297
A D+M+ +L+ + R D + + + + N+ + S
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 298 ILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHIC 357
L+ + K +++ M++ + + V Y LI + NA ++ M
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 358 DGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDA 417
PN+ ++D G +A ++ L+ S + D+ + +++ KAG ++D
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 418 CAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVIN 477
+ + K + P+ Y M+ + + G ++ L K+ + G N Y+ +I
Sbjct: 523 WELFCNLS-LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 478 CCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
R + + + EM GF + T+ ++ ++ +L K + S
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 167/404 (41%), Gaps = 37/404 (9%)
Query: 341 SGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIA 400
S +++AV + M KP+ T+I + +EA L + G + DL+
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 401 FTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKI 460
+ VV K G + A ++L+ MEK K IE D +Y ++ + +D L+ ++
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 461 LKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLF 520
GI + Y +I+C + SR+ +M++ PN++T + ++D + K
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 521 KRVRKLFS------------------------------------MAKKLGLVDVISYNTI 544
KL+ M K +V++Y+T+
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 545 IAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSC 604
I + + K +E +EM G + Y +++ + + +N + V ++M
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 605 TFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVG 664
+ TYNI++D + G + + + V L+ + PD+ +YN +I+ AG VED
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 665 LVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIG 708
L + G+ P+ I Y MI+ R EA MK+ G
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRV 523
GI+ + Y INC R + V +M++ G+ P+I+TL+ +L+ Y +K
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 524 RKLFSMAKKLGL-VDVISYNTIIAA-YGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLD 581
L ++G D ++ T+I + NK E+++ V +M G L Y ++++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA-LVDQMVQRGCQPDLVTYGTVVN 231
Query: 582 AYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRP 641
K G ++ ++L++M++ D YN +ID + +++ + + TE+ G+RP
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 642 DLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
D+ +Y++LI G DA L+ +M E I P+ +T++ +I A + K +EA K
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 163/372 (43%), Gaps = 16/372 (4%)
Query: 346 NAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVV 405
+AV ++ M P++ ++ + M F L +++ GI DL +++ +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 406 RMYVKAGSLKDACAVLETMEKQKDIEPDAYL-------YCDMLRIYQQCGMLDKLSYLYY 458
+ + L A AVL M K EPD YC RI ++D++ + Y
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 459 KILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD-IYGKA 517
K T+ ++ ++ A E + D+M+Q G P+++T +++ + +
Sbjct: 185 K--PDTFTFTTLIHGLFLHNKA-----SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 518 KLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYN 577
+ + L M K DV+ YNTII + K+++ + EM G + Y+
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 578 SMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKEC 637
S++ G+ + +L M E + T++ +ID + ++G + E + E+ +
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 638 GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
+ PD+ +Y++LI + + +++A + + M P+ +TY+ +I + + E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 698 IKWSLWMKQIGL 709
++ M Q GL
Sbjct: 418 MELFREMSQRGL 429
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 572 SLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVL 631
S+ +N +L A K + E ++ +M+ + D YTY+I I+ + + ++ + VL
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
++ + G PD+ + ++L+ Y + + DAV LV +M E G +PD T+T +I L +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 692 DKFLEAIKWSLWMKQIGLQ 710
+K EA+ M Q G Q
Sbjct: 202 NKASEAVALVDQMVQRGCQ 220
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 483 LPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISY 541
+ +D+ +F +M++ P+I+ N +L K F+ V L + LG+ D+ +Y
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 542 NTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKE 601
+ I + + L + + +M G+ + +S+L+ Y ++ + ++ +M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 602 TSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVED 661
D +T+ +I +E V ++ ++ + G +PDL +Y T++ G ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 662 AVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
A+ L+K+M + IE D + Y +I L + +A+ M G++
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
M+ + +S+G N +N L+ K G + F + ++P++ T+ +++
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 61 KKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNL 119
K+ VE+ F + G+ AY+ MI+ + R E+A+ +++ ++ED +PN
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 120 ENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLS 179
+ ++ A + G E + ++ MR GF+ + + G V+NM RL S
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGD-------ASTIGLVTNMLHDGRLDKS 626
Query: 180 IKDV 183
D+
Sbjct: 627 FLDM 630
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 158/717 (22%), Positives = 299/717 (41%), Gaps = 80/717 (11%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+NT+I + G + ++ M++ + P+ ++ L+ + K N A+ +++
Sbjct: 166 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 225
Query: 78 KLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEE 137
+L L+ ++ +++ Y L E+A + + D P++ + ++N + GK+ E
Sbjct: 226 ELNLI---THTILLSSYYNLHAIEEAYRDMVMSGFD---PDVVTFSSIINRLCKGGKVLE 279
Query: 138 AELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE 197
L+L M E PN V Y TL+ K + A L+ + G+ D Y +++
Sbjct: 280 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 339
Query: 198 GWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQH 257
G +AG+ REA+ +K L PN YT
Sbjct: 340 GLFKAGDLREAEKTFKMLLEDNQVPNVVT-YT---------------------------- 370
Query: 258 SSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLG 317
L+ KAG + I+ L + V+ N+ + S ++ YVK G++++A+ +L
Sbjct: 371 -----ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 425
Query: 318 DKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMG 377
++ V Y +I +G A+++ M + + N +I+ +++ +G
Sbjct: 426 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIG 485
Query: 378 MFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETME------------ 425
E + L ++ S G+ LD I +T ++ ++ K G + A A E M+
Sbjct: 486 RIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 545
Query: 426 ---------------------KQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSG 464
++K IEPD + M+ ++ G + + L+ K+ G
Sbjct: 546 VLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 605
Query: 465 ITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAK----LF 520
I + + V+ ++E + ++M+ PN+ T + LD K K +F
Sbjct: 606 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 665
Query: 521 KRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSML 580
K L S KL YNT+IA + + + + +M+ GF +NS++
Sbjct: 666 KTHETLLSYGIKLSRQ---VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 722
Query: 581 DAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLR 640
Y + + M E + + TYN +I + G I EV L+E+K G+R
Sbjct: 723 HGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMR 782
Query: 641 PDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
PD +YN LI G ++ ++ + EM +G+ P TY +I+ K L+A
Sbjct: 783 PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQA 839
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 150/683 (21%), Positives = 291/683 (42%), Gaps = 51/683 (7%)
Query: 3 REVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKK 62
R++ MS G + F+++I K G V G M E V PN T+ L+ K
Sbjct: 250 RDMVMS-GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 308
Query: 63 SWNVEEAEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLEN 121
+ A ++QM G+ + Y+ ++ + +AE+ +++ ED VPN+
Sbjct: 309 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 368
Query: 122 WLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIK 181
+ +++ + G L AE ++ M E PN+V Y++++ GY K +E A L ++
Sbjct: 369 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 428
Query: 182 DVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEE 241
D + P+ TY ++I+G +AG A KE++ +G + N
Sbjct: 429 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN------------------ 470
Query: 242 GAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVM 301
+ IL L+ ++ GR V ++K + + V + + + L+
Sbjct: 471 ----------------NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 514
Query: 302 AYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKP 361
+ K G + A+ + + + ++ Y++LI G + A Y M +P
Sbjct: 515 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEP 573
Query: 362 NLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVL 421
++ M+++ G KL+ +KS GI+ L++ +VV M + G +++A +L
Sbjct: 574 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 633
Query: 422 ETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCAR 481
M +I P+ Y L + D + + +L GI ++++Y+ +I +
Sbjct: 634 NQMMLM-EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 692
Query: 482 ALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVIS 540
+ + V +M GF P+ +T N ++ Y ++ +S+ + G+ +V +
Sbjct: 693 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 752
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
YNTII ++ + + EM+ G YN+++ K G M+ + M
Sbjct: 753 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 812
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAY------- 653
TYN++I + G + + +L E+ + G+ P+ +Y T+I
Sbjct: 813 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHP 872
Query: 654 -----GIAGMVEDAVGLVKEMRE 671
A + +A GL+KEM E
Sbjct: 873 DVEWNKKAMYLAEAKGLLKEMVE 895
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 189/417 (45%), Gaps = 42/417 (10%)
Query: 329 NLYHLLI---CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKL 385
+L+H L SC+ L A + S M P+ + ++I ++V G+ + L
Sbjct: 61 SLFHTLFRLYLSCE---RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL 117
Query: 386 -YLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
Y + + G+ D+ A V++ + K G L A ++L + + I D Y ++
Sbjct: 118 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL----RNRVISIDTVTYNTVISGL 173
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVIN--------CCARALPIDELSRV----- 491
+ G+ D+ +++K GI + Y+ +I+ A+AL +DE+S +
Sbjct: 174 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL-VDEISELNLITH 232
Query: 492 ----------------FDEMLQHGFTPNIITLNVMLDIYGKA-KLFKRVRKLFSMAKKLG 534
+ +M+ GF P+++T + +++ K K+ + L M +
Sbjct: 233 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 292
Query: 535 LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKN 594
+ ++Y T++ + + + +M G V L Y ++D K G + +
Sbjct: 293 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 352
Query: 595 VLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYG 654
+ + E + + TY ++D + G ++ ++T++ E + P++ +Y+++I Y
Sbjct: 353 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 412
Query: 655 IAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQD 711
GM+E+AV L+++M + + P+ TY +I L + K AI+ S M+ IG+++
Sbjct: 413 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 469
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 222/515 (43%), Gaps = 27/515 (5%)
Query: 175 RLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLH 234
R F SIK + E T S+ + + + +L + + S +TL L+
Sbjct: 22 RSFSSIKRPQIPESEETSLSITQ-----------RRFDPDLAPIKTRVYVSLFHTLFRLY 70
Query: 235 AKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRT-DNVPRILKGSLYQHVLFN 292
E GA TL M G S L +L+ + G D V I + V +
Sbjct: 71 LSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPD 130
Query: 293 LTSCSILVMAYVKHGLIDDAMKVLGDKRWK-DTVFEDNLYHLLICSCKDSGHLANAVKIY 351
+ + ++L+ ++ K G + A+ +L ++ DTV Y+ +I + G A +
Sbjct: 131 VFALNVLIHSFCKVGRLSFAISLLRNRVISIDTV----TYNTVISGLCEHGLADEAYQFL 186
Query: 352 SHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKA 411
S M P+ T+ID + +G F A+ L + L+LI T+++ Y
Sbjct: 187 SEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNL 242
Query: 412 GSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQEL 471
++++A + +PD + ++ + G + + L ++ + + N
Sbjct: 243 HAIEEAYRDM----VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 298
Query: 472 YDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAK 531
Y +++ +A ++ +M+ G +++ V++D KA + K F M
Sbjct: 299 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 358
Query: 532 KLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQME 590
+ V +V++Y ++ + +L S + +M ++ Y+SM++ Y K+G +E
Sbjct: 359 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 418
Query: 591 NFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLI 650
++LR+M++ + + +TY +ID + G + + E++ G+ + + L+
Sbjct: 419 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 478
Query: 651 KAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
G +++ GLVK+M G+ D+I YT++I
Sbjct: 479 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 513
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/582 (21%), Positives = 255/582 (43%), Gaps = 40/582 (6%)
Query: 101 EKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTL 160
E A ++ L+ + PN+ + ++N + ++G+++ A + M + G P+++AY+TL
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 161 MTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGY 220
+ GY K + +LF G++ D + S I+ + ++G+ A YK + G
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 221 KPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPR 279
PN LI + A +L G + S + +L+ + K G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG------- 440
Query: 280 ILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCK 339
NL S L +K G D + +Y +L+
Sbjct: 441 ------------NLRSGFALYEDMIKMGYPPDVV----------------IYGVLVDGLS 472
Query: 340 DSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLI 399
G + +A++ M + N+ + ++ID + + F EA K++ + GI+ D+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 400 AFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYK 459
FT V+R+ + G L++A + M K +EPDA YC ++ + + M + +
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCK-HMKPTIGLQLFD 590
Query: 460 IL-KSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAK 518
++ ++ I+ + + + VI+ + I++ S+ F+ +++ P+I+T N M+ Y +
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 519 LFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYN 577
++F + K + ++ +I +N +++ M G + Y
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 578 SMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKEC 637
++D + K +E + M+E + +Y+I+ID ++G ++E + + +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 638 GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKI 679
L PD+ +Y LI+ Y G + +A L + M NG++PD +
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 148/313 (47%), Gaps = 2/313 (0%)
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A +L + G +++ F ++ + K G + A + + ME Q+ IEPD Y ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME-QRGIEPDLIAYSTLI 328
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
Y + GML L+ + L G+ + ++ I+ ++ + S V+ ML G +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSST 560
PN++T +++ + ++ K G+ +++Y+++I + + NL S +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 561 VQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGE 620
++M G+ + Y ++D K+G M + +M S + +N +ID +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 621 QGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKIT 680
+E + V + G++PD+ ++ T+++ + G +E+A+ L M + G+EPD +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 681 YTNMITALQRNDK 693
Y +I A ++ K
Sbjct: 569 YCTLIDAFCKHMK 581
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 12 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEF 71
+LN +FN+LI + + K F +M ++P+VATF +M + +EEA F
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 72 AFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYS 130
F +M K+GL ++ AY +I + + ++ L++ +K+ ++ V+++
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
+ ++E+A ++ E P+IV YNT++ GY + ++ A+R+F +K P+
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
T +I + + A + + G KPNA L++ +K D EG+ ++M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 251 LNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLI 309
G S + ++ K GR D I ++ +L ++ + +IL+ Y K G +
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 310 DDA 312
+A
Sbjct: 793 VEA 795
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/541 (19%), Positives = 214/541 (39%), Gaps = 81/541 (14%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
+ G N F TLI KRG ++ F +M + ++P++ + L+ Y K+ +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 67 EEAEFAFNQMRKLGLVCESA-YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
F+Q G+ + +S+ I +Y + A V + + + PN+ + ++
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 126 LNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGL 185
+ Q G++ EA + + + G P+IV Y++L+ G+ K N+ + L+ + +G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 186 EPDETTY-----------------------------------RSMIEGWGRAGNYREAKW 210
PD Y S+I+GW R + EA
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 211 YYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYE 269
++ + G KP+ + T++ + E A+ M MG + ++ TL+ A+
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 270 KAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGD----KRWKDTV 325
K + ++ + ++ C++++ K I+DA K + K D V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 326 FEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPN-------LHIMCTMIDTYSVMGM 378
Y+ +IC L A +I+ + + PN +H++C D + M
Sbjct: 638 ----TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 379 FT----------------------------EAEKLYLNLKSSGIRLDLIAFTVVVRMYVK 410
F+ + KL+ ++ GI ++++++++ K
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 411 AGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQE 470
G + +A + K + PD Y ++R Y + G L + + LY +L++G+ +
Sbjct: 754 RGRVDEATNIFHQAIDAK-LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Query: 471 L 471
L
Sbjct: 813 L 813
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 181/409 (44%), Gaps = 42/409 (10%)
Query: 338 CKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLD 397
CK G + A ++ M +P+L T+ID Y GM KL+ G++LD
Sbjct: 297 CK-RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 398 LIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLY 457
++ F+ + +YVK+G L A V + M Q I P+ Y +++ Q G + + +Y
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 458 YKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKA 517
+ILK G+ + Y +I+ + + ++++M++ G+ P+++ V++D K
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 518 KLFKRVRKLFSMAKKLG---LVDVISYNTII-------------------AAYGQNKNLE 555
L + FS+ K LG ++V+ +N++I YG ++
Sbjct: 475 GLMLHAMR-FSV-KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 556 SMSSTVQEMQFDG------------FSVSLE----AYNSMLDAYGKEGQMENFKNVLRRM 599
+ ++ ++ +G F + LE AY +++DA+ K + + M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 600 KETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMV 659
+ + D N++I + + I + L E + PD+ +YNT+I Y +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 660 EDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIG 708
++A + + ++ P+ +T T +I L +N+ AI+ M + G
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 481 RALPIDEL---SRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-V 536
+ L +D++ SR+ +L G PN++T +++ + K R LF + ++ G+
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 537 DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVL 596
D+I+Y+T+I Y + L + G + + ++S +D Y K G + V
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 597 RRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIA 656
+RM + + TY I+I + G I E G+ ++ + G+ P + +Y++LI +
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 657 GMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWM 704
G + L ++M + G PD + Y ++ L + L A+++S+ M
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 20 TLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKL 79
TLI A K +G + F +M + ++A +++ L K +E+A FN + +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 80 GLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEA 138
+ + Y+ MI Y L ++AE + L++ PN ++++ + ++ A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 139 ELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEG 198
+ M E G PN V Y LM + K ++E + +LF +++ G+ P +Y +I+G
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 199 WGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHS 258
+ G EA + + P+ LI + K A + ML G +
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Query: 259 SILGTLLQAY 268
+L L Y
Sbjct: 811 DLLQRALSEY 820
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/646 (21%), Positives = 284/646 (43%), Gaps = 18/646 (2%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATF-GMLMGLYKKSWNVEEAEFAFNQM 76
+ LI C + G ++LG +++ + + F +L GL + + +M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 77 RKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDK---VVPNLENWLVMLNAYSQQ 132
+LG + +Y+ ++ + ++A E++ ++ +D+ P++ ++ ++N + ++
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
G ++A M + G P++V YN+++ K M+ A + ++ G+ PD TY
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 193 RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLN 252
S++ G+ +G +EA + K+++ G +P+ L++ K A D M
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 253 MGCQHS-SILGTLLQAYEKAGRTDNVPRIL-----KGSLYQHVLFNLTSCSILVMAYVKH 306
G + + GTLLQ Y G + +L G H +F SIL+ AY K
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF-----SILICAYAKQ 384
Query: 307 GLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIM 366
G +D AM V R + Y +I SG + +A+ + M P +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 367 CTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK 426
++I + AE+L L + GI L+ I F ++ + K G + ++ + E M +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 427 QKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPID 486
++P+ Y ++ Y G +D+ L ++ G+ N Y +IN + ++
Sbjct: 505 -IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 487 ELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTII 545
+ +F EM G +P+IIT N++L + + ++L+ + G +++ +YN I+
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 546 AAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCT 605
+NK + Q + + +N M+DA K G+ + K++
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Query: 606 FDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIK 651
+++TY +M + QG + E+ + +++ G D N +++
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/648 (20%), Positives = 280/648 (43%), Gaps = 45/648 (6%)
Query: 45 DVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMIT-IYTRLSLYEK 102
+V P++ T+G+L+G ++ ++ A + K G ++ A++ ++ + +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 103 AEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSM---REAGFSPNIVAYNT 159
+ V+R + E +PN+ ++ ++L + + +EA +L M R G P++V+Y T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 160 LMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLG 219
++ G+ K + + A + + D G+ PD TY S+I +A +A + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 220 YKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYE-KAGRTDNVP 278
P+ ++++ + + A+ L M + G + + +LL Y K GR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 279 RILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDN-LYHLLICS 337
+I + + +T+ L+ Y G + + M L D ++ + D+ ++ +LIC+
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 338 CKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLD 397
Y+ G +A ++ ++ G+ +
Sbjct: 381 -----------------------------------YAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 398 LIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLY 457
+ + V+ + K+G ++DA E M + + P +Y ++ C ++ L
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELI 464
Query: 458 YKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKA 517
++L GI N ++ +I+ + + E ++F+ M++ G PN+IT N +++ Y A
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524
Query: 518 KLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAY 576
KL S +GL + ++Y+T+I Y + +E +EM+ G S + Y
Sbjct: 525 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 577 NSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKE 636
N +L + + K + R+ E+ + TYNI++ + ++ + + L
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 644
Query: 637 CGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNM 684
L+ + ++N +I A G ++A L NG+ P+ TY M
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/630 (21%), Positives = 271/630 (43%), Gaps = 28/630 (4%)
Query: 77 RKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
R L V + +A ++ Y R++ D+V P+L + +++ + G+L+
Sbjct: 55 RALADVARDSPAAAVSRYNRMARAGA----------DEVTPDLCTYGILIGCCCRAGRLD 104
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL-SIKDVGLEPDETTYRSM 195
L ++ + GF + +A+ L+ G A + L + ++G P+ +Y +
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164
Query: 196 IEGWGRAGNYREAKWYYKELKHL-------GYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
++G +EA EL H+ G P+ + T+IN K D + A +T
Sbjct: 165 LKGLCDENRSQEA----LELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220
Query: 249 DMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
+ML+ G + +++ A KA D +L + V+ + + + ++ Y G
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
+A+ L R + Y LL+ +G A KI+ M KP +
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQ 427
T++ Y+ G E L + +GI D F++++ Y K G + A V M +Q
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM-RQ 399
Query: 428 KDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDE 487
+ + P+A Y ++ I + G ++ + +++ G++ +Y+ +I+ +
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 488 LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIA 546
+ EML G N I N ++D + K KLF + ++G+ +VI+YNT+I
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLIN 519
Query: 547 AYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTF 606
Y ++ + M G + Y+++++ Y K +ME+ + + M+ + +
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Query: 607 DHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLV 666
D TYNI++ + + + E G + +L +YN ++ + +DA+ +
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 667 KEMRENGIEPDKITYTNMITAL---QRNDK 693
+ + ++ + T+ MI AL RND+
Sbjct: 640 QNLCLMDLKLEARTFNIMIDALLKVGRNDE 669
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 270/629 (42%), Gaps = 28/629 (4%)
Query: 6 RMS-LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLE---CDVQPNVATFGMLMGLYK 61
RM+ LG N +N L+ + + HMM + P+V ++ ++ +
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 62 KSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLE 120
K + ++A +++M G++ + Y+++I + +KA EV+ + ++ V+P+
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 121 NWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSI 180
+ +L+ Y G+ +EA L MR G P++V Y+ LM K A+++F S+
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 181 KDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDE 240
GL+P+ TTY ++++G+ G E + G P+ LI +AK
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 241 EGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSIL 299
+ A+ M G +++ G ++ K+GR ++ + Q + L+ +I+
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE----QMIDEGLSPGNIV 443
Query: 300 VMAYVKHGLI-----DDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHM 354
+ + HGL + A +++ + + ++ +I S G + + K++ M
Sbjct: 444 YNSLI-HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 355 HICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSL 414
KPN+ T+I+ Y + G EA KL + S G++ + + ++ ++ Y K +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 415 KDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDC 474
+DA + + ME + PD Y +L+ Q LY +I +SG Y+
Sbjct: 563 EDALVLFKEME-SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLG 534
+++ + D+ ++F + T N+M+D K + LF G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 535 LVD------VISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ 588
LV +++ N I GQ LE + M+ +G +V N ++ + G+
Sbjct: 682 LVPNYWTYRLMAENII----GQGL-LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 589 MENFKNVLRRMKETSCTFDHYTYNIMIDI 617
+ L + E + + T ++ ID+
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFIDL 765
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 1/279 (0%)
Query: 432 PDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRV 491
PD Y ++ + + G DK Y+++L GI + Y+ +I +A +D+ V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 492 FDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQ 550
+ M+++G P+ +T N +L Y + K + G+ DV++Y+ ++ +
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 551 NKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYT 610
N M G + Y ++L Y +G + +L M DHY
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 611 YNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMR 670
++I+I Y +QG +++ + V +++++ GL P+ +Y +I +G VEDA+ ++M
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 671 ENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
+ G+ P I Y ++I L +K+ A + L M G+
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 33/323 (10%)
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
N+ G R+D IAFT + LK CA T + DI +LR +
Sbjct: 112 NVIKKGFRVDAIAFTPL---------LKGLCADKRTSDAM-DI---------VLRRMTEL 152
Query: 448 GMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITL 507
G + + Y IL G+ C N AL EL + + G P++++
Sbjct: 153 GCIPNV--FSYNILLKGL--------CDENRSQEAL---ELLHMMADDRGGGSPPDVVSY 199
Query: 508 NVMLD-IYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQF 566
+++ + + K M + L DV++YN+IIAA + + ++ + M
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 567 DGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINE 626
+G YNS+L Y GQ + L++M+ D TY++++D + G E
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 627 VVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMIT 686
+ + + GL+P++ +Y TL++ Y G + + GL+ M NGI PD ++ +I
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 687 ALQRNDKFLEAIKWSLWMKQIGL 709
A + K +A+ M+Q GL
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGL 402
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 147/323 (45%), Gaps = 4/323 (1%)
Query: 390 KSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGM 449
+ G D++++T V+ + K G A + M + I PD Y ++ +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM-LDRGILPDVVTYNSIIAALCKAQA 246
Query: 450 LDKLSYLYYKILKSGITWNQELYDCVINC-CARALPIDELSRVFDEMLQHGFTPNIITLN 508
+DK + ++K+G+ + Y+ +++ C+ P + + +M G P+++T +
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG-FLKKMRSDGVEPDVVTYS 305
Query: 509 VMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFD 567
+++D K RK+F K GL ++ +Y T++ Y L M + M +
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 568 GFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEV 627
G ++ ++ AY K+G+++ V +M++ + TY +I I + G + +
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 628 VGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITA 687
+ ++ + GL P YN+LI E A L+ EM + GI + I + ++I +
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 688 LQRNDKFLEAIKWSLWMKQIGLQ 710
+ + +E+ K M +IG++
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVK 508
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 131/262 (50%), Gaps = 8/262 (3%)
Query: 457 YYKILKSG---ITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD- 512
Y ++ ++G +T + Y +I CC RA +D +++ GF + I +L
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 513 IYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAY-GQNKNLESMS--STVQEMQFDG 568
+ + + + +LG + +V SYN ++ +N++ E++ + + + G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 569 FSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVV 628
+ +Y ++++ + KEG + + M + D TYN +I + +++ +
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 629 GVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
VL + + G+ PD +YN+++ Y +G ++A+G +K+MR +G+EPD +TY+ ++ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 689 QRNDKFLEAIKWSLWMKQIGLQ 710
+N + +EA K M + GL+
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLK 333
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 486 DELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLG---LVDVISYN 542
++ VFDE+L+ G +I LN L + V + MA+ D+ +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 543 TIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKN-VLRRMKE 601
+I + L+ + + + GF V A+ +L + + + + VLRRM E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 602 TSCTFDHYTYNIMIDIYGEQGWINEVVGVL---TELKECGLRPDLCSYNTLIKAYGIAGM 658
C + ++YNI++ ++ E + +L + + G PD+ SY T+I + G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 659 VEDAVGLVKEMRENGIEPDKITYTNMITAL---QRNDKFLEAI 698
+ A EM + GI PD +TY ++I AL Q DK +E +
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 4 EVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKS 63
E+ + +G K N +NTLI G ++ K M+ ++PN T+ L+ Y K
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 64 WNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWL 123
+E+A F +M G V P++ +
Sbjct: 560 SRMEDALVLFKEMESSG----------------------------------VSPDIITYN 585
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
++L Q + A+ + V + E+G + YN ++ G K + A ++F ++ +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPN 223
L+ + T+ MI+ + G EAK + G PN
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/560 (22%), Positives = 251/560 (44%), Gaps = 38/560 (6%)
Query: 134 KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYR 193
KL++A + M ++ P+IV +N L++ K++ + L ++++ + D +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 194 SMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
+I + R A ++ LGY+P+ L +L+N + + AV +D M M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 254 GCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDA 312
Q +++ TL+ + ++ + + +L + +V K G ID A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 313 MKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDT 372
+ +L + G + V IY+ + + +C +
Sbjct: 240 LSLLKKM--------------------EKGKIEADVVIYTTI--------IDALCNYKNV 271
Query: 373 YSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEP 432
+ +FTE + + GIR +++ + ++R G DA +L M ++K I P
Sbjct: 272 NDALNLFTE-------MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INP 323
Query: 433 DAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVF 492
+ + ++ + + G L + LY +++K I + Y +IN +DE +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 493 DEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQN 551
+ M+ PN++T N ++ + KAK + +LF + GLV + ++YNT+I Q
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 552 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTY 611
+ + ++M DG + Y+ +LD K G++E V ++++ D YTY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 612 NIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRE 671
NIMI+ + G + + + L G++P++ Y T+I + G+ E+A L +EM+E
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 672 NGIEPDKITYTNMITALQRN 691
+G P+ TY +I A R+
Sbjct: 564 DGTLPNSGTYNTLIRARLRD 583
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/545 (22%), Positives = 240/545 (44%), Gaps = 11/545 (2%)
Query: 112 EDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNME 171
+ + +P++ + +L+A ++ K + + M+ S ++ +YN L+ + + S +
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132
Query: 172 AAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLI 231
A + + +G EPD T S++ G+ EA ++ + Y+PN TLI
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 232 N---LHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQ 287
+ LH K + AV +D M+ GCQ GT++ K G D +LK
Sbjct: 193 HGLFLHNKASE---AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 288 HVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI-CSCKDSGHLAN 346
+ ++ + ++ A + ++DA+ + + K Y+ LI C C + G ++
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSD 308
Query: 347 AVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVR 406
A ++ S M PN+ +ID + G EAEKLY + I D+ ++ ++
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 407 MYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGIT 466
+ L +A + E M KD P+ Y +++ + + +++ L+ ++ + G+
Sbjct: 369 GFCMHDRLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 467 WNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKL 526
N Y+ +I +A D ++F +M+ G P+IIT +++LD K ++ +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 527 FSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGK 585
F +K + D+ +YN +I + +E + G ++ Y +M+ + +
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 586 EGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCS 645
+G E + R MKE + TYN +I G ++ E++ CG D +
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 646 YNTLI 650
+ +I
Sbjct: 608 ISMVI 612
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 202/483 (41%), Gaps = 41/483 (8%)
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKD 323
LL A K + D V + + + ++L S +IL+ + + + A+ VLG K K
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG-KMMKL 144
Query: 324 TVFED--NLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTE 381
D L LL C ++ AV + M + + +PN T+I + +E
Sbjct: 145 GYEPDIVTLSSLLNGYCH-GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A L + + G + DL + VV K G + A ++L+ MEK K IE D +Y ++
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYTTII 262
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
++ L+ ++ GI N Y+ +I C + SR+ +M++
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFS--------------------------------- 528
PN++T + ++D + K KL+
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 529 ---MAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGK 585
M K +V++YNT+I + + K +E +EM G + YN+++ +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 586 EGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCS 645
G + + + ++M D TY+I++D + G + + + V L++ + PD+ +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 646 YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMK 705
YN +I+ AG VED L + G++P+ I YT MI+ R EA MK
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 706 QIG 708
+ G
Sbjct: 563 EDG 565
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTR 96
F +M+ D PNV T+ L+ + K+ VEE F +M + GLV + Y+ +I +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
+ A+++ + + D V P++ + ++L+ + GKLE+A +V ++++ P+I
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
YN ++ G K +E LF S+ G++P+ Y +MI G+ R G EA ++E+K
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 217 HLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMG 254
G PN+ TLI + D+ + + +M + G
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 220/520 (42%), Gaps = 17/520 (3%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+N LI +R + L M++ +P++ T L+ Y + EA +QM
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM- 176
Query: 78 KLGLVCESAYSAMI--TIYTRLSLYEKAEEVIRLIREDKVV-----PNLENWLVMLNAYS 130
V E + + T+ L L+ KA E + LI D++V P+L + ++N
Sbjct: 177 ---FVMEYQPNTVTFNTLIHGLFLHNKASEAVALI--DRMVARGCQPDLFTYGTVVNGLC 231
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
++G ++ A +L M + ++V Y T++ N+ A LF + + G+ P+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
TY S+I G + +A ++ PN LI+ K A D+M
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 251 LNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLI 309
+ +L+ + R D + + + + N+ + + L+ + K +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 310 DDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG-KPNLHIMCT 368
++ M++ + + V Y+ LI +G A KI+ M + DG P++
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM-VSDGVPPDIITYSI 470
Query: 369 MIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQK 428
++D G +A ++ L+ S + D+ + +++ KAG ++D + ++ K
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LK 529
Query: 429 DIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDEL 488
++P+ +Y M+ + + G+ ++ L+ ++ + G N Y+ +I R
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 489 SRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
+ + EM GF + T+++++++ +L K ++ S
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
N +NTLI K VE G + F M + + N T+ L+ ++ + + A+ F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 74 NQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQ 132
+M G+ + YS ++ + EKA V +++ K+ P++ + +M+ +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
GK+E+ + S+ G PN++ Y T+++G+ + E A LF +K+ G P+ TY
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 193 RSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINL 233
++I R G+ + KE++ G+ +AS + +IN+
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + N +N+LI G ++ M+E + PNV TF L+ + K + EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 70 EFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
E +++M K + + YS++I + ++A+ + L+ PN+ + ++
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
+ + ++EE + M + G N V YNTL+ G + + + AQ++F + G+ PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPN 223
TY +++G + G +A ++ L+ +P+
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 163/374 (43%), Gaps = 16/374 (4%)
Query: 344 LANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTV 403
L +AV ++ M P++ ++ + M F L +++ I DL ++ +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 404 VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYL-------YCDMLRIYQQCGMLDKLSYL 456
++ + + L A AVL M K EPD YC RI + ++D++ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 457 YYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD-IYG 515
Y+ + +T+N ++ ++ A E + D M+ G P++ T +++ +
Sbjct: 180 EYQ--PNTVTFNTLIHGLFLHNKA-----SEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 516 KAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEA 575
+ + + L M K DV+ Y TII A KN+ + EM G ++
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 576 YNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELK 635
YNS++ G+ + +L M E + T++ +ID + ++G + E + E+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 636 ECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFL 695
+ + PD+ +Y++LI + + +++A + + M P+ +TY +I + +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 696 EAIKWSLWMKQIGL 709
E ++ M Q GL
Sbjct: 413 EGMELFREMSQRGL 426
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
Query: 481 RALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVIS 540
+A P+ L V+ + + + + NV+LD+ KL V M + L ++
Sbjct: 28 KASPLFSLRGVYFSAASYDYREKL-SRNVLLDL----KLDDAVDLFGEMVQSRPLPSIVE 82
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
+N +++A + + + S + MQ S L +YN +++ + + Q+ VL +M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVE 660
+ D T + +++ Y I+E V ++ ++ +P+ ++NTLI +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 661 DAVGLVKEMRENGIEPDKITYTNMITAL-QRND 692
+AV L+ M G +PD TY ++ L +R D
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/571 (20%), Positives = 256/571 (44%), Gaps = 9/571 (1%)
Query: 122 WLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIK 181
+ V++ G+ + + +L+ M++ G + ++M Y K RL L ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 182 DV-GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDE 240
+V EP +Y ++E ++ A + ++ P ++ +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 241 EGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSIL 299
+ A++ L DM GC +S++ TL+ + K R + ++L+ + + + + +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 300 VMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG 359
++ K I++A K++ + +D Y L+ G + A ++ +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---- 349
Query: 360 KPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSS-GIRLDLIAFTVVVRMYVKAGSLKDAC 418
KP + I T+I + G +A+ + ++ +S GI D+ + ++ Y K G + A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 419 AVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINC 478
VL M + K +P+ Y Y ++ + + G +D+ + ++ G+ N ++C+I+
Sbjct: 410 EVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 479 CARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-D 537
+ I E +F EM + G P++ T N ++ + K L G+V +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 538 VISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLR 597
++YNT+I A+ + ++ V EM F G + YNS++ + G+++ +++
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 598 RMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAG 657
+M + + NI+I+ G + E V E+ G PD+ ++N+LI AG
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 658 MVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
+ED + + ++++ GI PD +T+ +++ L
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 137/626 (21%), Positives = 263/626 (42%), Gaps = 59/626 (9%)
Query: 75 QMRKLGLVC-ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV----PNLENWLVMLNAY 129
QM+ G+V ES + +++ Y + + RL+ E + V P +++ V+L
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGF---PGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 130 SQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDE 189
+ A V M P + + +M + V+ +++A L + G P+
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 190 TTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDD 249
Y+++I + EA +E+ +G P+A +I K++ A ++
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 250 MLNMGCQHSSIL-GTLLQAYEKAGRTDNVP----RILKGSLYQHVLFNLTSCSILVMAYV 304
ML G I G L+ K GR D RI K + V+FN L+ +V
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI---VIFN-----TLIHGFV 364
Query: 305 KHGLIDDAMKVLGDKRWKDTVFED-NLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNL 363
HG +DDA VL D + D Y+ LI G + A+++ M KPN+
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 364 HIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLET 423
+ ++D + +G EA + + + G++ + + F ++ + K + +A +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 424 MEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARAL 483
M + K +PD Y + ++ SG+ C ++ AL
Sbjct: 485 MPR-KGCKPDVYTFNSLI---------------------SGL--------CEVDEIKHAL 514
Query: 484 PIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYN 542
+ +M+ G N +T N +++ + + K RKL + M + +D I+YN
Sbjct: 515 ------WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 543 TIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKET 602
++I + ++ S ++M DG + S + N +++ + G +E + M
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 603 SCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDA 662
T D T+N +I+ G I + + + +L+ G+ PD ++NTL+ G V DA
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 663 VGLVKEMRENGIEPDKITYTNMITAL 688
L+ E E+G P+ T++ ++ ++
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/547 (20%), Positives = 235/547 (42%), Gaps = 7/547 (1%)
Query: 147 EAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYR 206
+ G+ + Y L+ G + RL + +KD G+ E+ + S++ + +AG
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 207 EAKWYYKELKHL-GYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSI-LGTL 264
+ E++++ +P + ++ + + A N DML+ + G +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
++A+ D+ +L+ + N L+ + K +++A+++L +
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 325 VFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
V + ++ +I + A K+ + M I P+ +++ +G A+
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
L+ + + +++ F ++ +V G L DA AVL M I PD Y ++ Y
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
+ G++ + + + G N Y +++ + IDE V +EM G PN
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 505 ITLNVMLDIYGKAKLFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQE 563
+ N ++ + K ++F M +K DV ++N++I+ + ++ +++
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 564 MQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGW 623
M +G + YN++++A+ + G+++ + ++ M D TYN +I G
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 624 INEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTN 683
+++ + ++ G P S N LI +GMVE+AV KEM G PD +T+ +
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 684 MITALQR 690
+I L R
Sbjct: 640 LINGLCR 646
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A ++ ++ S I L F VV++ + + A ++L M K + P++ +Y ++
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLI 259
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
+C +++ L ++ G + E ++ VI + I+E +++ + ML GF
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTV 561
P+ IT +++ K + LF K +++ +NT+I + + L+ + +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---PEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 562 QEMQFD-GFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGE 620
+M G + YNS++ Y KEG + VL M+ C + Y+Y I++D + +
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 621 QGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKIT 680
G I+E VL E+ GL+P+ +N LI A+ + +AV + +EM G +PD T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 681 YTNMITALQRNDKFLEAIKWSLWM 704
+ ++I+ L D+ IK +LW+
Sbjct: 497 FNSLISGLCEVDE----IKHALWL 516
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 162/380 (42%), Gaps = 40/380 (10%)
Query: 47 QPNVATFGMLMGLYKKSWNVEEAEFAFNQM-RKLGLVCE-SAYSAMITIYTRLSLYEKAE 104
+P + F L+ + +++A+ + M G+V + Y+++I Y + L A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 105 EVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGY 164
EV+ +R PN+ ++ ++++ + + GK++EA VL M G PN V +N L++ +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 165 GKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNA 224
K + A +F + G +PD T+ S+I G + A W +++ G N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 225 SNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKG 283
TLIN + + + A +++M+ G I +L++ +AG D + +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 284 SLYQ-HVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSG 342
L H N+ SC+IL+ + G++++
Sbjct: 590 MLRDGHAPSNI-SCNILINGLCRSGMVEE------------------------------- 617
Query: 343 HLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFT 402
AV+ M + P++ ++I+ G + ++ L++ GI D + F
Sbjct: 618 ----AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 403 VVVRMYVKAGSLKDACAVLE 422
++ K G + DAC +L+
Sbjct: 674 TLMSWLCKGGFVYDACLLLD 693
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 142/303 (46%), Gaps = 2/303 (0%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+N+LIY K G V L + H M +PNV ++ +L+ + K ++EA N+M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 78 KLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
GL + ++ +I+ + + +A E+ R + P++ + +++ + +++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMI 196
A +L M G N V YNTL+ + + ++ A++L + G DE TY S+I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
+G RAG +A+ ++++ G+ P+ + LIN + E AV +M+ G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 257 HSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV 315
+ +L+ +AGR ++ + + + + + + + L+ K G + DA +
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 316 LGD 318
L +
Sbjct: 692 LDE 694
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G K + FN+LI + ++ M+ V N T+ L+ + + ++EA
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 70 EFAFNQMRKLG-LVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
N+M G + E Y+++I R +KA + + D P+ + +++N
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
+ G +EEA M G +P+IV +N+L+ G + +E +F ++ G+ PD
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPN 223
T+ +++ + G +A E G+ PN
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
Y +I G N +++ + +M+ +G + S++ Y K G ++ M+
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 601 ET-SCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMV 659
SC +YN++++I V ++ + P L ++ ++KA+ +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 660 EDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
+ A+ L+++M ++G P+ + Y +I +L + ++ EA++
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 136/597 (22%), Positives = 259/597 (43%), Gaps = 72/597 (12%)
Query: 85 SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVS 144
+ A+ ++ L + E+A + ++ +V P + +L+ +++ GK ++ +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 145 MREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGN 204
M AG P + YN ++ K ++EAA+ LF +K GL PD TY SMI+G+G+ G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 205 YREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTL 264
+ +++E+K + +P+ LIN K+ L +G
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-----------LPIG---------- 351
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
L+ Y R +KG+ + N+ S S LV A+ K G++ A+K D R
Sbjct: 352 LEFY----------REMKGNGLKP---NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 325 VFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
V + Y LI + G+L++A ++ + M + N+ +ID EAE+
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
L+ + ++G+ +L ++ ++ +VKA ++ A +L + K + I+PD LY I+
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTF--IW 515
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
C L+K I+ V +EM + G N
Sbjct: 516 GLCS-LEK--------------------------------IEAAKVVMNEMKECGIKANS 542
Query: 505 ITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQE 563
+ ++D Y K+ L K+L + V V+++ +I +NK +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 564 MQFD-GFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
+ D G + + +M+D K+ Q+E + +M + D Y ++D +QG
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 623 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKI 679
+ E + + ++ E G++ DL +Y +L+ ++ A ++EM GI PD++
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 204/449 (45%), Gaps = 3/449 (0%)
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKD 323
LL + K G+TD+V R K + + + +I++ K G ++ A + + +++
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 324 TVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAE 383
V + Y+ +I G L + V + M +P++ +I+ + G
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 384 KLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRI 443
+ Y +K +G++ ++++++ +V + K G ++ A M ++ + P+ Y Y ++
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDA 411
Query: 444 YQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPN 503
+ G L L ++L+ G+ WN Y +I+ A + E +F +M G PN
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 504 IITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQ 562
+ + N ++ + KAK R +L + K G+ D++ Y T I + +E+ +
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
EM+ G + Y +++DAY K G ++L MKE T+ ++ID +
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 623 WINEVVGVLTELK-ECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITY 681
+++ V + + GL+ + + +I VE A L ++M + G+ PD+ Y
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 682 TNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
T+++ + LEA+ M +IG++
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/553 (19%), Positives = 233/553 (42%), Gaps = 73/553 (13%)
Query: 19 NTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRK 78
N L++ K G + ++F M+ +P V T+ +++ K +VE A F +M+
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 79 LGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEE 137
GLV ++ Y++MI + ++ + +++ P++ + ++N + + GKL
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 138 AELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE 197
M+ G PN+V+Y+TL+ + K M+ A + ++ ++ VGL P+E TY S+I+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 198 GWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQH 257
+ GN +A E+ +G + N LI+ E
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE------------------- 451
Query: 258 SSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLG 317
+ +A E G+ D V+ NL S + L+ +VK +D A+++L
Sbjct: 452 -----RMKEAEELFGKMDTA----------GVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 318 DKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMG 377
+ + + KP+L + T I +
Sbjct: 497 ELKGRGI-----------------------------------KPDLLLYGTFIWGLCSLE 521
Query: 378 MFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLY 437
A+ + +K GI+ + + +T ++ Y K+G+ + +L+ M K+ DIE +
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELDIEVTVVTF 580
Query: 438 CDMLRIYQQCGMLDKLSYLYYKILKS-GITWNQELYDCVINCCARALPIDELSRVFDEML 496
C ++ + ++ K + +I G+ N ++ +I+ + ++ + +F++M+
Sbjct: 581 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Query: 497 QHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLE 555
Q G P+ ++D K L ++G+ +D+++Y +++ L+
Sbjct: 641 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 556 SMSSTVQEMQFDG 568
S ++EM +G
Sbjct: 701 KARSFLEEMIGEG 713
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 179/386 (46%), Gaps = 10/386 (2%)
Query: 328 DNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
D L+ +LI D G L A++ +S M P ++ ++ +G + ++ +
Sbjct: 196 DALFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
++ +G R + + +++ K G ++ A + E M K + + PD Y M+ + +
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKV 310
Query: 448 GMLDKLSYLYYKILKSGITWNQELYDCVINCCAR--ALPIDELSRVFDEMLQHGFTPNII 505
G LD + ++ + Y+ +INC + LPI + EM +G PN++
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG--LEFYREMKGNGLKPNVV 368
Query: 506 TLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEM 564
+ + ++D + K + ++ K + +++GLV + +Y ++I A + NL EM
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 565 QFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWI 624
G ++ Y +++D +M+ + + +M + +YN +I + + +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 625 NEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNM 684
+ + +L ELK G++PDL Y T I +E A ++ EM+E GI+ + + YT +
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 685 ITALQRNDKFLEAIKWSLWMKQIGLQ 710
+ A ++ E + MK++ ++
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIE 574
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 9/301 (2%)
Query: 406 RMYVKAGSL-------KDACAVLETMEKQKDI-EPDAYLYCDMLRIYQQCGMLDKLSYLY 457
RMY A S+ K C V + + +++ P ++ + + GML++ +
Sbjct: 156 RMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCF 215
Query: 458 YKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKA 517
K+ + + + +++ A+ D++ R F +M+ G P + T N+M+D K
Sbjct: 216 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE 275
Query: 518 KLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAY 576
+ R LF K GLV D ++YN++I +G+ L+ +EM+ + Y
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 577 NSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKE 636
N++++ + K G++ R MK + +Y+ ++D + ++G + + + +++
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 637 CGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLE 696
GL P+ +Y +LI A G + DA L EM + G+E + +TYT +I L ++ E
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 697 A 697
A
Sbjct: 456 A 456
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 206/495 (41%), Gaps = 47/495 (9%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
GA+ +N +I K G VE F M + P+ T+ ++ + K +++
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 70 EFAFNQMRKLGLVCES---AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
F +M+ + CE Y+A+I + + E R ++ + + PN+ ++ ++
Sbjct: 317 VCFFEEMKDM--CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPN--------------------------------- 153
+A+ ++G +++A V MR G PN
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 154 --IVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWY 211
+V Y L+ G M+ A+ LF + G+ P+ +Y ++I G+ +A N A
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 212 YKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEK 270
ELK G KP+ T I E E A +++M G + +S++ TL+ AY K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 271 AGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDN- 329
+G +L + + + +L+ K+ L+ A+ ++ D + N
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF-NRISNDFGLQANA 613
Query: 330 -LYHLLICS-CKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
++ +I CKD+ + A ++ M P+ +++D G EA L
Sbjct: 614 AIFTAMIDGLCKDN-QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
+ G++LDL+A+T +V L+ A + LE M + I PD L +L+ + +
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE-GIHPDEVLCISVLKKHYEL 731
Query: 448 GMLDKLSYLYYKILK 462
G +D+ L ++K
Sbjct: 732 GCIDEAVELQSYLMK 746
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 151/348 (43%), Gaps = 39/348 (11%)
Query: 400 AFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYK 459
F + + + G L++A M++ + + P +L + + G D + +
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFR-VFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 460 ILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKL 519
++ +G Y+ +I+C + ++ +F+EM G P+ +T N M+D +GK
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 520 FKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNS 578
F K + DVI+YN +I + + L +EM+ +G ++ +Y++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 579 MLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEV---------VG 629
++DA+ KEG M+ M+ + YTY +ID + G +++ VG
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 630 V--------------------------LTELKECGLRPDLCSYNTLIKAYGIAGMVEDAV 663
V ++ G+ P+L SYN LI + A ++ A+
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 664 GLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSL-WMKQIGLQ 710
L+ E++ GI+PD + Y I L +K +EA K + MK+ G++
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEK-IEAAKVVMNEMKECGIK 539
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 3/375 (0%)
Query: 319 KRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGM 378
KR + + L +I + G + A +I+ ++ +I Y G+
Sbjct: 224 KRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGL 283
Query: 379 FTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAG-SLKDACAVLETMEKQKDIEPDAYLY 437
EA ++ ++K G+R +L+ + V+ K G K + M++ ++PD +
Sbjct: 284 HEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITF 342
Query: 438 CDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQ 497
+L + + G+ + L+ ++ I + Y+ +++ + +D + +M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 498 HGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLES 556
PN+++ + ++D + KA F LF + LG+ +D +SYNT+++ Y + E
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 557 MSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 616
++EM G + YN++L YGK+G+ + K V MK + TY+ +ID
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 617 IYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEP 676
Y + G E + + E K GLR D+ Y+ LI A G+V AV L+ EM + GI P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 677 DKITYTNMITALQRN 691
+ +TY ++I A R+
Sbjct: 583 NVVTYNSIIDAFGRS 597
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARA-LPIDELSRVFD 493
Y + ++ Y + G+ ++ ++ + + G+ N Y+ VI+ C + + ++++ FD
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 494 EMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTIIAAYGQNK 552
EM ++G P+ IT N +L + + L++ R LF M + DV SYNT++ A +
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 553 NLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYN 612
++ + +M ++ +Y++++D + K G+ + N+ M+ D +YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 613 IMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMREN 672
++ IY + G E + +L E+ G++ D+ +YN L+ YG G ++ + EM+
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 673 GIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
+ P+ +TY+ +I + + EA++ K GL+
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/530 (22%), Positives = 226/530 (42%), Gaps = 74/530 (13%)
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
M++ + GK+ A+ + + G+ + A++ L++ YG+ E A +F S+K+
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 184 GLEPDETTYRSMIEGWGRAG-NYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEG 242
GL P+ TY ++I+ G+ G +++ ++ E++ G +P+ +L+ + ++ E
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 243 AVNTLDDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVM 301
A N D+M N + TLL A K G+ D IL + ++ N+ S S ++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 302 AYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAV------------- 348
+ K G D+A+ + G+ R+ + Y+ L+ G A+
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 349 ----------------------KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLY 386
K+++ M PNL T+ID YS G++ EA +++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 387 LNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQ 446
KS+G+R D++ ++ ++ K G + A ++++ M K+ I P+ Y ++ + +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGR 596
Query: 447 CGMLDKL-------SYLYYKILKSGITWNQ-------------ELYDCVINCCARALPID 486
+D+ S + S +T + E + C +
Sbjct: 597 SATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGM--Q 654
Query: 487 ELS---RVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNT 543
ELS VF +M Q PN++T + +L+ + F+ L ++L L D Y
Sbjct: 655 ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL---EELRLFDNKVYGV 711
Query: 544 IIAAY-GQNKNL----ESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ 588
+ GQ +N+ +S+ V EM DG + S YN++ D GQ
Sbjct: 712 VHGLLMGQRENVWLQAQSLFDKVNEM--DGSTAS-AFYNALTDMLWHFGQ 758
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 2/229 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGC-VELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
G + N +N +I AC K G + AK+F M VQP+ TF L+ + + E
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 69 AEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
A F++M + + +Y+ ++ + + A E++ + +++PN+ ++ +++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
+++ G+ +EA + MR G + + V+YNTL++ Y KV E A + + VG++
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 188 DETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK 236
D TY +++ G+G+ G Y E K + E+K PN TLI+ ++K
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSM 529
+L +I+ R + R+F+ G+ + + ++ YG++ L + +F+
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 530 AKKLGL-VDVISYNTIIAAYGQNK-NLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEG 587
K+ GL ++++YN +I A G+ + ++ EMQ +G +NS+L + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 588 QMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYN 647
E +N+ M D ++YN ++D + G ++ +L ++ + P++ SY+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 648 TLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQI 707
T+I + AG ++A+ L EMR GI D+++Y +++ + + EA+ M +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 708 GLQ 710
G++
Sbjct: 474 GIK 476
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
LG L+ +NTL+ K G E M ++ +V T+ L+G Y K +E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 69 AEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
+ F +M++ ++ YS +I Y++ LY++A E+ R + + ++ + +++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNME 171
A + G + A ++ M + G SPN+V YN+++ +G+ + M+
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 23/238 (9%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
++RE+ S+G K + +N L+ K+G + K F M V PN+ T+ L+ Y
Sbjct: 466 ILREM-ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 61 KKSWNVEEAEFAFNQMRKLGLVCESA-YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNL 119
K +EA F + + GL + YSA+I + L A +I + ++ + PN+
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 120 ENWLVMLNA------------YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKV 167
+ +++A YS G L + L ++ E + I + L T
Sbjct: 585 VTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNR 644
Query: 168 SNM---EAAQRL------FLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
+ E Q L F + + ++P+ T+ +++ R ++ +A +EL+
Sbjct: 645 TTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/589 (21%), Positives = 254/589 (43%), Gaps = 42/589 (7%)
Query: 117 PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRL 176
P+ + +M+ Y ++G + A MR G +P Y +L+ Y +M+ A
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 177 FLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK 236
+K+ G+E TY ++ G+ +AG+ A +++ E K + NAS +I H +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 237 YEDEEGAVNTLDDMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTS 295
+ E A + +M G +I T++ Y
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGY--------------------------- 459
Query: 296 CSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNL--YHLLICSCKDSGHLANAVKIYSH 353
++A K GL+ V KR K+ F + Y LI G ++ A+++
Sbjct: 460 ---TMVADEKKGLV-----VF--KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 354 MHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGS 413
M K NL MI+ + + + A ++ ++ G++ D+I + ++ + G+
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 414 LKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYD 473
+ A ++ M+K + P + ++ Y + G + + ++ + + G ++
Sbjct: 570 MDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 474 CVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKL 533
+IN +++ + DEM G + N T ++ Y + + F+ +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 534 GL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENF 592
GL VD+ +Y ++ A ++ ++S + +EM + YN ++D + + G +
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 593 KNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKA 652
+++++MK+ D +TY I + G +N + E++ G++P++ +Y TLIK
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 653 YGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWS 701
+ A + E A+ +EM+ GI+PDK Y ++T+L EA +S
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYS 857
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/527 (20%), Positives = 240/527 (45%), Gaps = 3/527 (0%)
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVN 245
+P T + M++ +GR G+ A+ ++ ++ G P + +LI+ +A D + A++
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 246 TLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYV 304
+ M G + S + ++ + KAG + + H N + ++ A+
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 305 KHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLH 364
+ ++ A ++ + + +YH ++ + ++ + C P +
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 365 IMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETM 424
+I+ Y+ +G ++A ++ +K G++ +L +++++ +VK +A AV E M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 425 EKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALP 484
K+ ++PD LY +++ + G +D+ ++ K + +I+ A++
Sbjct: 546 VKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 485 IDELSRVFDEMLQHGFTPNIITLNVMLD-IYGKAKLFKRVRKLFSMAKKLGLVDVISYNT 543
+ VFD M + G P + T N +++ + K ++ K V L M + +Y
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 544 IIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETS 603
I+ Y + +Q +G V + Y ++L A K G+M++ V + M +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 604 CTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAV 663
+ + YNI+ID + +G + E ++ ++K+ G++PD+ +Y + I A AG + A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 664 GLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
++EM G++P+ TYT +I R +A+ MK +G++
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 232/528 (43%), Gaps = 42/528 (7%)
Query: 47 QPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCESA-YSAMITIYTRLSLYEKAEE 105
+P+ FG+++ Y + ++ A F +MR G+ S Y+++I Y ++A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 106 VIRLIREDKVVPNLENWLVMLNAYSQQG-------------------------------- 133
+R ++E+ + +L + V++ +S+ G
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 134 ---KLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
+E AE ++ M E G I Y+T+M GY V++ + +F +K+ G P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
TY +I + + G +A + +K G K N +IN K +D A +DM
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 251 LNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSIL--VMAYVKHG 307
+ G + IL ++ A+ G D + +K Q + T+ + + + Y K G
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE--MQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
+ +++V R V + ++ LI + + AV+I M + N H
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQ 427
++ Y+ +G +A + + L++ G+ +D+ + +++ K+G ++ A AV + M
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS-A 722
Query: 428 KDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDE 487
++I ++++Y ++ + + G + + + L ++ K G+ + Y I+ C++A ++
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 488 LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL 535
++ +EM G PNI T ++ + +A L ++ + K +G+
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 206/470 (43%), Gaps = 3/470 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G +++ ++ ++ +K G E WF N + +G ++ + ++ N+E A
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 70 EFAFNQMRKLGLVCESA-YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
E +M + G+ A Y M+ YT ++ +K V + ++E P + + ++N
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
Y++ GK+ +A V M+E G N+ Y+ ++ G+ K+ + A +F + G++PD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
Y ++I + GN A KE++ L ++P +I+ +AK D ++ D
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 249 DMLNMGCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
M GC + L+ + + + IL V N + + ++ Y G
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
A + + + + Y L+ +C SG + +A+ + M + N +
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQ 427
+ID ++ G EA L +K G++ D+ +T + KAG + A +E ME
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 428 KDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVIN 477
++P+ Y +++ + + + +K Y ++ GI ++ +Y C++
Sbjct: 794 -GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/611 (18%), Positives = 249/611 (40%), Gaps = 18/611 (2%)
Query: 78 KLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEE 137
K+ + + M+ Y R +A E +R + P + +++AY+ ++E
Sbjct: 303 KISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDE 362
Query: 138 AELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE 197
A + M+E G ++V Y+ ++ G+ K + EAA F K + + + Y +I
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIY 422
Query: 198 GWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQH 257
+ N A+ +E++ G + +T+++ + DE+ + + G
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 258 SSIL-GTLLQAYEKAGRTDN---VPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAM 313
+ + G L+ Y K G+ V R++K +H NL + S+++ +VK +A
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH---NLKTYSMMINGFVKLKDWANAF 539
Query: 314 KVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTY 373
V D + + LY+ +I + G++ A++ M +P +I Y
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 374 SVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPD 433
+ G + +++ ++ G + F ++ V+ ++ A +L+ M + +
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM-TLAGVSAN 658
Query: 434 AYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFD 493
+ Y +++ Y G K + ++ G+ + Y+ ++ C ++ + V
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 494 EMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNK 552
EM N N+++D + + L KK G+ D+ +Y + I+A +
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 553 NLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYN 612
++ + T++EM+ G +++ Y +++ + + E + MK D Y+
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 613 IMIDIYGEQGWINEV---VGVLT---ELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLV 666
++ + I E GV+T E+ E GL D+ T + +E + G +
Sbjct: 839 CLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDM---GTAVHWSKCLCKIEASGGEL 895
Query: 667 KEMRENGIEPD 677
E + PD
Sbjct: 896 TETLQKTFPPD 906
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G K + + + I AC+K G + + M V+PN+ T+ L+ + ++ E+A
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Query: 70 EFAFNQMRKLGLVCESA-YSAMIT-IYTRLSLYE 101
+ +M+ +G+ + A Y ++T + +R S+ E
Sbjct: 819 LSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 852
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/562 (21%), Positives = 248/562 (44%), Gaps = 11/562 (1%)
Query: 125 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
++ ++GK+EEA ++ + + G SPN+ YN L+ K A+ LF + +G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAV 244
L P++ TY +I+ + R G A + E+ G K + +LIN H K+ D A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 245 NTLDDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
+ +M+N + + + T L+ Y G+ + R+ + + ++ + + L+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNL 363
+ GLI DA+K+ + + Y+++I + G ++ A + M P+
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 364 HIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLET 423
+ +I + G +EA+ L L+ I +T ++ + + G L++A +V +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 424 MEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS----GITWNQELYDCVINCC 479
M Q+ ++ D Y ++ + K L++ +LK G+ + +Y +I+
Sbjct: 638 M-VQRGVDLDLVCYGVLI----DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 480 ARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DV 538
++ E ++D M+ G PN +T +++ KA L S + + V +
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 539 ISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRR 598
++Y + + + + + G + YN ++ + ++G++E ++ R
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 599 MKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGM 658
M + D TY MI+ + + + + + + E G+RPD +YNTLI +AG
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 659 VEDAVGLVKEMRENGIEPDKIT 680
+ A L EM G+ P+ T
Sbjct: 873 MGKATELRNEMLRQGLIPNNKT 894
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 156/691 (22%), Positives = 292/691 (42%), Gaps = 25/691 (3%)
Query: 34 GAKWFHMML-ECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMI 91
G F MM+ + + P V T L+ K + A FN M +G+ + Y+ +I
Sbjct: 175 GVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVI 234
Query: 92 TIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFS 151
L +A+E+I + N+ + V+++ ++ K+ EA + +
Sbjct: 235 RSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLK 294
Query: 152 PNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWY 211
P++V Y TL+ G KV E + + + P E S++EG + G EA
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 212 YKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEK 270
K + G PN LI+ K A D M +G + + + L+ + +
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 271 AGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDA---MKVLGDKRWKDTVFE 327
G+ D L + + ++ + L+ + K G I A M + +K+ + TV
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 328 DNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
Y L+ G + A+++Y M P+++ T++ G+ +A KL+
Sbjct: 475 ---YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
+ ++ + + + V++ Y + G + A L+ M +K I PD Y Y ++
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM-TEKGIVPDTYSYRPLIHGLCLT 590
Query: 448 GMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITL 507
G + + K N+ Y +++ R ++E V EM+Q G +++
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 508 NVMLDIYGKAKLFKRVRKLF-SMAKKL---GL-VDVISYNTIIAAYGQNKNLESMSSTVQ 562
V++D L + RKLF + K++ GL D + Y ++I A + + +
Sbjct: 651 GVLID----GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
M +G + Y ++++ K G + + + +M+ S + TY +DI +G
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKG 765
Query: 623 WINEVVGVLTELKEC---GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKI 679
++ V EL GL + +YN LI+ + G +E+A L+ M +G+ PD I
Sbjct: 766 EVDMQKAV--ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 680 TYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
TYT MI L R + +AI+ M + G++
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/567 (22%), Positives = 234/567 (41%), Gaps = 78/567 (13%)
Query: 19 NTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRK 78
++L+ KRG +E +++ V PN+ + L+ K EAE F++M K
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 79 LGLVC-ESAYSAMITIYTR--------------------LSLY---------------EK 102
+GL + YS +I ++ R LS+Y
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 103 AEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMT 162
AE + + K+ P + + ++ Y +GK+ +A + M G +P+I + TL++
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 163 GYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKP 222
G + + A +LF + + ++P+ TY MIEG+ G+ +A + KE+ G P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 223 NASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRIL 281
+ + LI+ A +D + C+ + I T LL + + G+ + +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 282 KGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDS 341
+ + + V +L +L+ +KH KD
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKH--------------------------------KDR 663
Query: 342 GHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAF 401
+K MH KP+ I +MID S G F EA ++ + + G + + +
Sbjct: 664 KLFFGLLK---EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 402 TVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLD--KLSYLYYK 459
T V+ KAG + +A + M+ + P+ Y L I + G +D K L+
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTK-GEVDMQKAVELHNA 778
Query: 460 ILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKL 519
ILK G+ N Y+ +I R I+E S + M+ G +P+ IT M++ +
Sbjct: 779 ILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 520 FKRVRKLF-SMAKKLGLVDVISYNTII 545
K+ +L+ SM +K D ++YNT+I
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G K + ++ ++I A +K G + + +M+ PN T+ ++ K+ V EA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 70 EFAFNQMRKLGLVC-ESAYSAMITIYTRLSL-YEKAEEVIRLIREDKVVPNLENWLVMLN 127
E ++M+ + V + Y + I T+ + +KA E+ I + ++ N + +++
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANTATYNMLIR 795
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
+ +QG++EEA ++ M G SP+ + Y T++ + ++++ A L+ S+ + G+ P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 188 DETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPN 223
D Y ++I G AG +A E+ G PN
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 48 PNVATFGMLMG-LYKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEV 106
PN T+G + L K ++++A N + K L + Y+ +I + R E+A E+
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 107 IRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGK 166
I + D V P+ + M+N ++ +++A + SM E G P+ VAYNTL+ G
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 167 VSNMEAAQRLFLSIKDVGLEPDETTYRS 194
M A L + GL P+ T R+
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 46/316 (14%)
Query: 401 FTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKI 460
F ++++ YV++ + D V + M + + P+ +L + L+ +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 461 LKSGITWNQELYDCVINCCARAL-PIDELSRVFDEMLQH----GFTPNIITLNVMLD-IY 514
+ GI + +Y VI R+L + +LSR EM+ H G NI+ NV++D +
Sbjct: 219 VSVGIRPDVYIYTGVI----RSLCELKDLSRA-KEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 515 GKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE 574
K K+++ V +A K DV++Y T++ + + E + EM FS S
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTEL 634
A +S+++ K G++E N+++R+ +D
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRV---------------VDF----------------- 361
Query: 635 KECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKF 694
G+ P+L YN LI + +A L M + G+ P+ +TY+ +I R K
Sbjct: 362 ---GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 695 LEAIKWSLWMKQIGLQ 710
A+ + M GL+
Sbjct: 419 DTALSFLGEMVDTGLK 434
>sp|O04647|PP399_ARATH Pentatricopeptide repeat-containing protein At5g27270
OS=Arabidopsis thaliana GN=EMB976 PE=2 SV=2
Length = 1038
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 149/680 (21%), Positives = 300/680 (44%), Gaps = 22/680 (3%)
Query: 37 WFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYT 95
W M +E V PN T+ +++ Y K EEA AF +M+ LG V E YS++I++
Sbjct: 281 WLEM-VEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSV 339
Query: 96 RLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIV 155
+ +EKA + +R +VP+ ML+ Y + +A + M + V
Sbjct: 340 KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 399
Query: 156 AYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKEL 215
++ YGK+ AQ +F + + L DE TY +M + +GN +A + +
Sbjct: 400 IRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMM 459
Query: 216 KHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTD 275
K + ++ +AK ++ + A + G +S +L Y + +
Sbjct: 460 KTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGE 519
Query: 276 NVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI 335
+K + V F++ + Y K G++ +A ++ K ++ +DN + +
Sbjct: 520 KAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIV-KMGREARVKDNRF---V 575
Query: 336 CSCKDSGHLANAVKIYSHMHICD-GKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGI 394
+ +S H+ N K H + + + ++ + M++ G E K LNL
Sbjct: 576 QTLAESMHIVN--KHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNET-KAILNLM---F 629
Query: 395 RLDLIAFTV--VVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDK 452
+ DL + V V+ +V+ G + A + + + + + + ++ +Y + L +
Sbjct: 630 KTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRL-GLRMEEETIATLIAVYGRQHKLKE 688
Query: 453 LSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD 512
LY +S T + + +I+ R +++ +F E + G P +T++++++
Sbjct: 689 AKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVN 747
Query: 513 IY---GKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGF 569
GK + + + + + K + L D + YNT+I A + L+ S + M G
Sbjct: 748 ALTNRGKHREAEHISRT-CLEKNIEL-DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGV 805
Query: 570 SVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVG 629
S++ YN+M+ YG+ Q++ + + + D Y MI YG+ G ++E +
Sbjct: 806 PCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALS 865
Query: 630 VLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQ 689
+ +E+++ G++P SYN ++K + + + L++ M NG D TY +I
Sbjct: 866 LFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYA 925
Query: 690 RNDKFLEAIKWSLWMKQIGL 709
+ +F EA K +K+ G+
Sbjct: 926 ESSQFAEAEKTITLVKEKGI 945
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 140/742 (18%), Positives = 313/742 (42%), Gaps = 40/742 (5%)
Query: 2 IREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYK 61
+R V S AKL+F+ + + +RG ++ + M L+ +P+V + +++ LY
Sbjct: 142 MRFVMSSFVAKLSFR--DMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYG 199
Query: 62 KSWNVEEAEFAFNQMRKLGLVCES---AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPN 118
+ ++ AE F +M ++G CE A M+ Y R + + ++E +++ +
Sbjct: 200 QVGKIKMAEETFLEMLEVG--CEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLS 257
Query: 119 LENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
+ ML++ ++ + + + M E G PN Y +++ Y K E A + F
Sbjct: 258 TSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFG 317
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
+K +G P+E TY S+I +AG++ +A Y++++ G P+ T+++L+ K E
Sbjct: 318 EMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTE 377
Query: 239 DEEGAVNTLDDM-LNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCS 297
+ A++ DM N I G +++ Y K G + + + + ++L + +
Sbjct: 378 NYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYL 437
Query: 298 ILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHIC 357
+ ++ G + A+ V+ + +D Y +++ ++ A + + +
Sbjct: 438 AMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT 497
Query: 358 DGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDA 417
G P+ M++ Y+ + + +A+ + + D+ + +R+Y K G + +A
Sbjct: 498 -GLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEA 556
Query: 418 CAVLETMEKQKDIEPDAYLYCD-----------------------------MLRIYQQCG 448
++ M ++ ++ + ++ ML + + G
Sbjct: 557 QDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEG 616
Query: 449 MLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLN 508
L++ + + K+ + + VI+ R + + + D +++ G T+
Sbjct: 617 NLNETKAILNLMFKTDL--GSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIA 674
Query: 509 VMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDG 568
++ +YG+ K ++L+ A + ++I AY + LE E G
Sbjct: 675 TLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKG 734
Query: 569 FSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVV 628
+ +++A G+ +++ R E + D YN +I E G +
Sbjct: 735 CDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCAS 794
Query: 629 GVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
+ + G+ + +YNT+I YG ++ A+ + R +G+ D+ YTNMI
Sbjct: 795 EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHY 854
Query: 689 QRNDKFLEAIKWSLWMKQIGLQ 710
+ K EA+ M++ G++
Sbjct: 855 GKGGKMSEALSLFSEMQKKGIK 876
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + Q +NT+I + ++ + F + + + ++ Y K + EA
Sbjct: 804 GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEA 863
Query: 70 EFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
F++M+K G+ +Y+ M+ I L+ + +E+++ + + +L +L ++
Sbjct: 864 LSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQV 923
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
Y++ + EAE + ++E G + +++L++ K ME A+R + + + G+ PD
Sbjct: 924 YAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKEL 215
R++++G+ G+ + +Y+++
Sbjct: 984 SACKRTILKGYMTCGDAEKGILFYEKM 1010
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 131/628 (20%), Positives = 284/628 (45%), Gaps = 13/628 (2%)
Query: 60 YKKSWNVEEAEFAFNQMRKLGLVCES---AYSAMITIYTRLSLYEKAEEVIRLIREDKVV 116
Y + V+EA F +M CE +Y+A++++ +++A +V +R+ +
Sbjct: 86 YGRKGKVQEAVNVFERMDFYD--CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGIT 143
Query: 117 PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRL 176
P++ ++ + + ++ + + A +L +M G N+VAY T++ G+ + + L
Sbjct: 144 PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 177 FLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK 236
F + G+ +T+ ++ + G+ +E + ++ G PN I +
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 237 YEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTS 295
+ +GAV + ++ G + I L+ K + L + + + + +
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 296 CSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMH 355
+ L+ Y K G++ A +++GD + V + Y LI G A+ +++
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 356 ICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLK 415
KPN+ + T+I S GM EA +L + G+ ++ F ++V K G +
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQ-QCGMLDKLSYLYYKILKSGITWNQELYDC 474
DA +++ M K PD + + ++ Y Q M + L L +L +G+ + Y+
Sbjct: 444 DADGLVKVM-ISKGYFPDIFTFNILIHGYSTQLKMENALEILDV-MLDNGVDPDVYTYNS 501
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGK-AKLFKRVRKLFSMAKKL 533
++N + +++ + M++ G PN+ T N++L+ + KL + + L M K
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 534 GLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVS--LEAYNSMLDAYGKEGQMEN 591
D +++ T+I + +N +L+ + ++M+ + + VS YN ++ A+ ++ +
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME-EAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 592 FKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIK 651
+ + + M + D YTY +M+D + + G +N L E+ E G P L + +I
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Query: 652 AYGIAGMVEDAVGLVKEMRENGIEPDKI 679
+ V +A G++ M + G+ P+ +
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/547 (22%), Positives = 233/547 (42%), Gaps = 14/547 (2%)
Query: 133 GKLEEAELVLVSMRE-AGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETT 191
GK E E VLV MRE G Y M YG+ ++ A +F + EP +
Sbjct: 54 GKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFS 113
Query: 192 YRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDML 251
Y +++ +G + +A Y ++ G P+ + + K A+ L++M
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 252 NMGCQ-----HSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKH 306
+ GC+ + +++G + KA + ++L V L++ + L+ K
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG----VSLCLSTFNKLLRVLCKK 229
Query: 307 GLIDDAMKVLGDKRWKDTVFEDNL-YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHI 365
G + + K+L DK K V + Y+L I G L AV++ + KP++
Sbjct: 230 GDVKECEKLL-DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 366 MCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETME 425
+I F EAE + + G+ D + ++ Y K G ++ A ++
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 426 KQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPI 485
+ PD + Y ++ G ++ L+ + L GI N LY+ +I + I
Sbjct: 349 FNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 486 DELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTI 544
E +++ +EM + G P + T N++++ K L M K D+ ++N +
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 545 IAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSC 604
I Y +E+ + M +G + YNS+L+ K + E+ + M E C
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 605 TFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVG 664
+ +T+NI+++ ++E +G+L E+K + PD ++ TLI + G ++ A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 665 LVKEMRE 671
L ++M E
Sbjct: 588 LFRKMEE 594
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/574 (21%), Positives = 257/574 (44%), Gaps = 17/574 (2%)
Query: 50 VATFGMLMGLYKKSWNVEEAEFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVIR 108
VA ++ G Y++++ E E F +M G+ +C S ++ ++ + + ++ E+++
Sbjct: 182 VAYCTVVGGFYEENFKAEGYEL-FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 109 LIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVS 168
+ + V+PNL + + + Q+G+L+ A ++ + E G P+++ YN L+ G K S
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 169 NMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLY 228
+ A+ + + GLEPD TY ++I G+ + G + A+ + G+ P+
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 229 TLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQ 287
+LI+ + A+ ++ L G + + IL TL++ G ++ +
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 288 HVLFNLTSCSILVMAYVKHGLIDDA---MKVLGDKRWKDTVFEDNLYHLLICSCKDSGHL 344
++ + + +ILV K G + DA +KV+ K + +F +++LI +
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT---FNILIHGYSTQLKM 477
Query: 345 ANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVV 404
NA++I M P+++ ++++ F + + Y + G +L F ++
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 405 VRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS- 463
+ + L +A +LE M K K + PDA + ++ + + G LD L+ K+ ++
Sbjct: 538 LESLCRYRKLDEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRV 523
++ + Y+ +I+ L + ++F EM+ P+ T +M+D + K
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 524 RK-LFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDA 582
K L M + + + + +I + + + M G EA N++ D
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP--EAVNTICDV 714
Query: 583 YGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 616
KE + K VL + + SC +Y Y ++ D
Sbjct: 715 DKKE--VAAPKLVLEDLLKKSC-ITYYAYELLFD 745
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 173/442 (39%), Gaps = 80/442 (18%)
Query: 342 GHLANAVKIYSHMHICDGKPNLH----IMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLD 397
G + AV ++ M D +P + IM ++D+ G F +A K+Y+ ++ GI D
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS----GYFDQAHKVYMRMRDRGITPD 145
Query: 398 LIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLY 457
+ +FT+ ++ + K A +L M Q E + YC ++ + + + L+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 458 YKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD----- 512
K+L SG++ ++ ++ + + E ++ D++++ G PN+ T N+ +
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 513 ----------------------------IYG--KAKLFKRVRKLFSMAKKLGL-VDVISY 541
IYG K F+ GL D +Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 542 NTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKE 601
NT+IA Y + ++ V + F+GF Y S++D EG+ +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 602 TSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVED 661
+ YN +I QG I E + E+ E GL P++ ++N L+ G V D
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 662 AVGLVKEM-----------------------------------RENGIEPDKITYTNMIT 686
A GLVK M +NG++PD TY +++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 687 ALQRNDKFLEAIKWSLWMKQIG 708
L + KF + ++ M + G
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKG 526
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 219/538 (40%), Gaps = 57/538 (10%)
Query: 216 KHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDML-NMGCQHSSILGTLLQAYEKAGRT 274
K +G+K S ++I Y E L DM N+G + + G + A + GR
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVG--NHMLEGVYVGAMKNYGRK 89
Query: 275 DNVPRILKGSLYQHVLFNLTSCSILVMAY-------VKHGLIDDAMKVLGDKRWKDTVFE 327
V + ++++ + F C V +Y V G D A KV R +D
Sbjct: 90 GKVQEAV--NVFERMDF--YDCEPTVFSYNAIMSVLVDSGYFDQAHKVY--MRMRDRGIT 143
Query: 328 DNLYHLLI---CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
++Y I CK S A A+++ ++M + N+ CT++ + E +
Sbjct: 144 PDVYSFTIRMKSFCKTSRPHA-ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
L+ + +SG+ L L F ++R+ K G +K+ +L+ + K + + P+ + Y ++
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK-RGVLPNLFTYNLFIQGL 261
Query: 445 QQCGMLD--------------KLSYLYY---------------------KILKSGITWNQ 469
Q G LD K + Y K++ G+ +
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 470 ELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSM 529
Y+ +I + + R+ + + +GF P+ T ++D R LF+
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 530 AKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ 588
A G+ +VI YNT+I + + EM G ++ +N +++ K G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 589 MENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNT 648
+ + +++ M D +T+NI+I Y Q + + +L + + G+ PD+ +YN+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 649 LIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQ 706
L+ ED + K M E G P+ T+ ++ +L R K EA+ MK
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 154/737 (20%), Positives = 318/737 (43%), Gaps = 76/737 (10%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
F+ ++ C + VE G + M++ ++ N G L+ +Y K + +A F +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 78 KLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEE 137
VC ++ + + Y + L E+A V +R++ P+ ++ ++N Y + GKL++
Sbjct: 223 DPNTVC---WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 138 AELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE 197
A L+ M SP++VA+N +++G+GK A F +++ ++ +T S++
Sbjct: 280 ARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 198 GWGRAGNYREAKWYYKELKHLGYKPNASNLY---TLINLHAKYEDEEGAVNTLDDMLNMG 254
G N + E LG ASN+Y +L+++++K E E A + +
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGL---ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE-- 390
Query: 255 CQHSSILGTLLQAYEKAGRTDNVPRI---LKGSLYQHVLFNLTS----CS---------- 297
++ +++ Y G + V + +K S Y F TS C+
Sbjct: 391 -KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 298 ------------------ILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCK 339
LV Y K G ++DA ++ +D V ++ +I S
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV----TWNTIIGSYV 505
Query: 340 DSGHLANAVKIYSHMHIC----DGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
+ + A ++ M++C DG + T+ V G++ + L++K G+
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGAC---LASTLKACTHVHGLYQGKQVHCLSVK-CGLD 561
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
DL + ++ MY K G +KDA V ++ + + +A ++ Y Q L++
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA-----LIAGYSQ-NNLEEAVV 615
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNV-MLDIY 514
L+ ++L G+ ++ + ++ C + + ++ ++ + GF+ L + +L +Y
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 515 GKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE 574
++ LFS ++ + +++ + QN E +EM+ DG
Sbjct: 676 MNSRGMTEACALFSELSSPK--SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTEL 634
+ ++L + + + + + D T N +ID+Y + G + V E+
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 635 KECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKF 694
+ R ++ S+N+LI Y G EDA+ + MR++ I PD+IT+ ++TA K
Sbjct: 794 RR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 695 LEAIK-WSLWMKQIGLQ 710
+ K + + + Q G++
Sbjct: 851 SDGRKIFEMMIGQYGIE 867
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 133/653 (20%), Positives = 265/653 (40%), Gaps = 66/653 (10%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTR 96
F + E + PN TF +++ + NVE M K+GL S A++ +Y +
Sbjct: 148 FVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAK 207
Query: 97 LSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVA 156
A V I V PN W + + Y + G EEA LV MR+ G P+ +A
Sbjct: 208 CDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 157 YNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELK 216
+ T++ Y ++ ++ A+ LF + PD + MI G G+ G A Y+ ++
Sbjct: 264 FVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 217 HLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILG-TLLQAYEKAGRTD 275
K S L ++++ + + + + + +G + +G +L+ Y K + +
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 276 NVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLI 335
++ + ++ +F + ++ Y +G M++ D + +D + L+
Sbjct: 380 AAAKVFEALEEKNDVF----WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 336 CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
+C S L + +S + NL + ++D Y+ G +A +++ +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR--- 492
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
D + + ++ YV Q + E +A+ D+ + CG++ +
Sbjct: 493 -DNVTWNTIIGSYV-----------------QDENESEAF---DLFKRMNLCGIVSDGAC 531
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG 515
L + C + + +V ++ G ++ T + ++D+Y
Sbjct: 532 LA----------------STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 516 KAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEA 575
K + K RK+FS L V+S N +IA Y QN NLE QEM G + S
Sbjct: 576 KCGIIKDARKVFS---SLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEIT 631
Query: 576 YNSMLDAYGKEGQM---ENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLT 632
+ ++++A K + F + K + Y ++ +Y + E + +
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQI--TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 633 ELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
EL + + ++ + G E+A+ KEMR +G+ PD+ T+ ++
Sbjct: 690 ELSS---PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 124/684 (18%), Positives = 275/684 (40%), Gaps = 36/684 (5%)
Query: 2 IREVRMSLG--AKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGL 59
+++ R+ G + + +N +I KRGC + ++F M + V+ +T G ++
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 60 YKKSWNVEEAEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPN 118
N++ + KLGL S+++++Y++ E A +V + E V
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV-- 394
Query: 119 LENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
W M+ Y+ G+ + + + M+ +G++ + + +L++ ++E +
Sbjct: 395 --FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
I L + ++++ + + G +A+ ++ + + T+I + + E
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWNTIIGSYVQDE 508
Query: 239 DEEGAVNTLDDMLNMG-CQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCS 297
+E A + M G + L + L+A ++ S+ + +L + S
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 298 ILVMAYVKHGLIDDAMKVLGD-KRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHI 356
L+ Y K G+I DA KV W +V N + + +L AV ++ M
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEW--SVVSMN----ALIAGYSQNNLEEAVVLFQEMLT 622
Query: 357 CDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTV-VVRMYVKAGSLK 415
P+ T+++ T + + + G + + ++ MY+ + +
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCV 475
+ACA+ + K I L+ M+ + Q G ++ Y ++ G+ +Q + V
Sbjct: 683 EACALFSELSSPKSI----VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 476 INCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL 535
+ C+ + E + + + +T N ++D+Y K K ++F ++
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS- 797
Query: 536 VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNV 595
+V+S+N++I Y +N E M+ + +L A G++ + + +
Sbjct: 798 -NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 596 LRRM---KETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKA 652
M DH M+D+ G G++ E ++ L+PD +++L+ A
Sbjct: 857 FEMMIGQYGIEARVDHVA--CMVDLLGRWGYLQEADDF---IEAQNLKPDARLWSSLLGA 911
Query: 653 YGIAGMVEDAVGLVKEMRENGIEP 676
I G +D G + + +EP
Sbjct: 912 CRIHG--DDIRGEISAEKLIELEP 933
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 123/314 (39%), Gaps = 55/314 (17%)
Query: 376 MGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKD-IEPDA 434
+G ++ L L + S G RL +V +Y K CA + EKQ D +E D
Sbjct: 78 IGKAVHSKSLILGIDSEG-RLG----NAIVDLYAK-------CAQVSYAEKQFDFLEKDV 125
Query: 435 YLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDE 494
+ ML +Y G K+ + + ++ I N+ + V++ CAR ++ ++
Sbjct: 126 TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCS 185
Query: 495 MLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNL 554
M++ G N ++D+Y K R++F ++ NT+
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW--------IVDPNTV---------- 227
Query: 555 ESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIM 614
+ + Y K G E V RM++ DH + +
Sbjct: 228 --------------------CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV 267
Query: 615 IDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGI 674
I+ Y G + + + E+ PD+ ++N +I +G G A+ MR++ +
Sbjct: 268 INTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSV 323
Query: 675 EPDKITYTNMITAL 688
+ + T ++++A+
Sbjct: 324 KSTRSTLGSVLSAI 337
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 182/406 (44%), Gaps = 49/406 (12%)
Query: 297 SILVMAYVKHGLIDDAMKVL--------GDKRWKDTVFEDNLYHLLICSCKDSGHLANAV 348
++L+ AY GLI+ A VL K TV+ + L+ K G+ A+
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM----KRKGNTEEAI 249
Query: 349 KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
++ M KP MI+ Y + KLY ++S + ++ +T +V +
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 409 VKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWN 468
+ G + A + E ++ + +EPD Y+Y ++ Y + G Y Y
Sbjct: 310 AREGLCEKAEEIFEQLQ-EDGLEPDVYVYNALMESYSRAG------YPY----------- 351
Query: 469 QELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
+ +F M G P+ + N+M+D YG+A L +F
Sbjct: 352 ------------------GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 529 MAKKLGLVDVI-SYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEG 587
K+LG+ + S+ +++AY + +++ + V+EM +G NSML+ YG+ G
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 588 QMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYN 647
Q + +L M+ CT D TYNI+I+IYG+ G++ + + ELKE RPD+ ++
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 648 TLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDK 693
+ I AY + + + +EM ++G PD T +++A ++
Sbjct: 514 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQ 559
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 189/410 (46%), Gaps = 19/410 (4%)
Query: 308 LIDDAMKVLGDKRW-----------KDTVFEDNL--YHLLICSCKDSGHLANAVKIYSHM 354
LI+ ++++ +K+W + + F+ ++ ++LLI + A +Y +
Sbjct: 122 LINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL 181
Query: 355 HICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTV----VVRMYVK 410
P +I Y + G+ AE + + +++ + I TV + + +
Sbjct: 182 LESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241
Query: 411 AGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQE 470
G+ ++A V + M++ + +P Y M+ +Y + LY ++ N
Sbjct: 242 KGNTEEAIDVFQRMKRDR-CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 471 LYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMA 530
Y ++N AR ++ +F+++ + G P++ N +++ Y +A ++FS+
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 531 KKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQM 589
+ +G D SYN ++ AYG+ + +EM+ G + +++++ +L AY K +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 590 ENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTL 649
+ +++ M E D + N M+++YG G ++ +L E++ D+ +YN L
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 650 IKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
I YG AG +E L E++E PD +T+T+ I A R +++ ++
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 530
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 226/498 (45%), Gaps = 47/498 (9%)
Query: 85 SAYSAMITIYTRLSLYEKAEEVIR----LIREDKVVPNLENWLVMLNAYSQQGKLEEAEL 140
+++ +I + +L L +K + +I ++R+ P++ + ++++AY Q+ + +EAE
Sbjct: 117 ASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAES 176
Query: 141 VLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDE---TTYRSMIE 197
+ V + E+ + P Y L+ Y +E A+ + + +++ + P T Y + IE
Sbjct: 177 LYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIE 236
Query: 198 GW-GRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
G R GN EA ++ +K KP +INL+ K + +M + C+
Sbjct: 237 GLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK 296
Query: 257 HSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVL 316
N+ + + LV A+ + GL + A ++
Sbjct: 297 P----------------------------------NICTYTALVNAFAREGLCEKAEEIF 322
Query: 317 GDKRWKDTVFED-NLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSV 375
++ +D + D +Y+ L+ S +G+ A +I+S M +P+ M+D Y
Sbjct: 323 -EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 376 MGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAY 435
G+ ++AE ++ +K GI + + +++ Y KA + A+++ M + +EPD +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTF 440
Query: 436 LYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEM 495
+ ML +Y + G K+ + ++ T + Y+ +IN +A ++ + +F E+
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 496 LQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNL 554
+ F P+++T + Y + KL+ + ++F G D + +++A + +
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Query: 555 ESMSSTVQEMQFDGFSVS 572
E ++S ++ M G +VS
Sbjct: 561 EQVTSVLRTMH-KGVTVS 577
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 211/494 (42%), Gaps = 52/494 (10%)
Query: 31 VELGAKWFHMMLECD-------VQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVC 83
+ L KW ++L C+ QP+V F +L+ Y + + +EAE
Sbjct: 129 LRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAE------------- 175
Query: 84 ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLV 143
SLY ++L+ E + VP + + +++ AY G +E AE+VLV
Sbjct: 176 --------------SLY------VQLL-ESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 214
Query: 144 SMREAGFSP---NIVAYNTLMTGYGK-VSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGW 199
M+ SP + YN + G K N E A +F +K +P TY MI +
Sbjct: 215 EMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY 274
Query: 200 GRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSS 259
G+A + Y E++ KPN L+N A+ E A + + G +
Sbjct: 275 GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 334
Query: 260 -ILGTLLQAYEKAGRTDNVPRILKGSLYQHV--LFNLTSCSILVMAYVKHGLIDDAMKVL 316
+ L+++Y +AG I SL QH+ + S +I+V AY + GL DA V
Sbjct: 335 YVYNALMESYSRAGYPYGAAEIF--SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 317 GDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVM 376
+ + + LL+ + + + I M +P+ ++ +M++ Y +
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 377 GMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYL 436
G FT+ EK+ +++ D+ + +++ +Y KAG L+ + + K+K+ PD
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL-KEKNFRPDVVT 511
Query: 437 YCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEML 496
+ + Y + + K ++ +++ SG + +++ C+ +++++ V M
Sbjct: 512 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM- 570
Query: 497 QHGFTPNIITLNVM 510
G T + + +M
Sbjct: 571 HKGVTVSSLVPKLM 584
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 129/275 (46%), Gaps = 6/275 (2%)
Query: 12 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEF 71
K N + L+ A + G E + F + E ++P+V + LM Y ++ A
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 72 AFNQMRKLGLVCE---SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
F+ M+ +G CE ++Y+ M+ Y R L+ AE V ++ + P +++ +++L+A
Sbjct: 356 IFSLMQHMG--CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
YS+ + + E ++ M E G P+ N+++ YG++ +++ +++ D
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
+TY +I +G+AG + + ELK ++P+ + I +++ + + +
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 249 DMLNMGC-QHSSILGTLLQAYEKAGRTDNVPRILK 282
+M++ GC LL A + + V +L+
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + + ++N L+ + ++ G A+ F +M +P+ A++ +++ Y ++ +A
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 70 EFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
E F +M++LG+ ++ +++ Y++ K E +++ + E+ V P+ MLN
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
Y + G+ + E +L M + +I YN L+ YGK +E + LF+ +K+ PD
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
T+ S I + R Y + ++E+ G P+ L++ + E E + L
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Query: 249 DMLNMGCQHSSILGTLL 265
M + G SS++ L+
Sbjct: 569 TM-HKGVTVSSLVPKLM 584
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 12 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEF 71
K + +N +I K + K + M +PN+ T+ L+ + + E+AE
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 72 AFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYS 130
F Q+++ GL + Y+A++ Y+R A E+ L++ P+ ++ +M++AY
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
+ G +AE V M+ G +P + ++ L++ Y K ++ + + + + G+EPD
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK 236
SM+ +GR G + + + E+++ + S LIN++ K
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 486
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 567 DG-FSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWIN 625
DG F V +L KE + +VL + T ++D N+ + + + W +
Sbjct: 79 DGIFPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLI-NVSVQLRLNKKWDS 137
Query: 626 EVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
++ L++ +PD+ +N LI AYG ++A L ++ E+ P + TY +I
Sbjct: 138 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 197
Query: 686 TA 687
A
Sbjct: 198 KA 199
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 137/585 (23%), Positives = 246/585 (42%), Gaps = 88/585 (15%)
Query: 129 YSQQGKLEEAELVL---VSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGL 185
+S + ++ +LVL M G + N+ + ++ + + A I +G
Sbjct: 79 FSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY 138
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLIN---LHAKYEDEEG 242
EPD T+ ++I G G EA + +G+KP L L+N L+ K D
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD--- 195
Query: 243 AVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVM 301
AV +D M+ G Q + + G +L+ K+G+T +L +L + I +
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT---------ALAMELLRKMEERKIKLD 246
Query: 302 AYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKP 361
A VK+ +I D + CKD G L NA +++ M I
Sbjct: 247 A-VKYSIIIDGL------------------------CKD-GSLDNAFNLFNEMEI----- 275
Query: 362 NLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVL 421
G + D+I +T ++R + AG D +L
Sbjct: 276 ------------------------------KGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 422 ETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCAR 481
M K+K I PD + ++ + + G L + L+ ++++ GI+ + Y +I+ +
Sbjct: 306 RDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 482 ALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVIS 540
+D+ + + D M+ G PNI T N++++ Y KA L +LF G+V D ++
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
YNT+I + + LE QEM + +Y +LD G+ E + +++
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVE 660
++ D YNI+I +++ + L G++PD+ +YN +I G +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 661 DAVGLVKEMRENGIEPDKITYTNMITA------LQRNDKFLEAIK 699
+A L ++M E+G P+ TY +I A ++ K +E IK
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/523 (19%), Positives = 221/523 (42%), Gaps = 36/523 (6%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
+ LG + + F+TLI G V + M+E +P + T L+ + V
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 67 EEAEFAFNQMRKLGLVC-ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
+A ++M + G E Y ++ + + A E++R + E K+ + + ++
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 126 LNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGL 185
++ + G L+ A + M GF +I+ Y TL+ G+ + +L + +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVN 245
PD + ++I+ + + G REA+ +KE+ G P+ +LI+ K + A +
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 246 TLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVK 305
LD M++ GC N+ + +IL+ Y K
Sbjct: 374 MLDLMVSKGCGP----------------------------------NIRTFNILINGYCK 399
Query: 306 HGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHI 365
LIDD +++ + V + Y+ LI + G L A +++ M +P++
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 366 MCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETME 425
++D G +A +++ ++ S + LD+ + +++ A + DA + ++
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 426 KQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPI 485
K ++PD Y M+ + G L + L+ K+ + G + N Y+ +I
Sbjct: 520 -LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 486 DELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
+ +++ +E+ + GF+ + T+ +++D+ +L K + S
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/555 (20%), Positives = 240/555 (43%), Gaps = 20/555 (3%)
Query: 38 FHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYT-- 95
F M +P + F L + ++ + QM G + + Y+ I I
Sbjct: 60 FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG-IAHNLYTLSIMINCCC 118
Query: 96 ---RLSL-YEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFS 151
+LSL + ++I+L E P+ + ++N +G++ EA ++ M E G
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYE----PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 152 PNIVAYNTLMTGY---GKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREA 208
P ++ N L+ G GKVS+ A L + + G +P+E TY +++ ++G A
Sbjct: 175 PTLITLNALVNGLCLNGKVSD---AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 209 KWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQA 267
++++ K +A +I+ K + A N ++M G + I+ TL++
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 268 YEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFE 327
+ AGR D+ ++L+ + + + ++ + S L+ +VK G + +A ++ + + +
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 328 DNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
Y LI L A + M PN+ +I+ Y + + +L+
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
+ G+ D + + +++ + + G L+ A + + M ++ + PD Y +L
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDN 470
Query: 448 GMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITL 507
G +K ++ KI KS + + +Y+ +I+ A +D+ +F + G P++ T
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 508 NVMLDIYGKAKLFKRVRKLFSMAKKLG-LVDVISYNTIIAAYGQNKNLESMSSTVQEMQF 566
N+M+ K LF ++ G + +YN +I A+ + + ++E++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 567 DGFSVSLEAYNSMLD 581
GFSV ++D
Sbjct: 591 CGFSVDASTVKMVVD 605
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD---IYGK-AKL 519
GI N +INCC R + ++++ G+ P+ +T + +++ + G+ ++
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 520 FKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSM 579
+ V ++ M K L I+ N ++ N + + M GF + Y +
Sbjct: 162 LELVDRMVEMGHKPTL---ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 580 LDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGL 639
L K GQ +LR+M+E D Y+I+ID + G ++ + E++ G
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 640 RPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIK 699
+ D+ Y TLI+ + AG +D L+++M + I PD + ++ +I + K EA +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 700 WSLWMKQIGLQ 710
M Q G+
Sbjct: 339 LHKEMIQRGIS 349
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 562 QEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQ 621
QEM L ++ + + Q + ++ ++M+ + YT +IMI+
Sbjct: 61 QEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRC 120
Query: 622 GWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITY 681
++ + ++ + G PD +++TLI + G V +A+ LV M E G +P IT
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180
Query: 682 TNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
++ L N K +A+ M + G Q
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 152/722 (21%), Positives = 295/722 (40%), Gaps = 60/722 (8%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
FN LI G E + M + P + T+ ++ Y K + A + M+
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255
Query: 78 KLGL---VCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGK 134
G+ VC Y+ +I R + K ++R +R+ + PN + ++N +S +GK
Sbjct: 256 SKGVDADVC--TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 135 LEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRS 194
+ A +L M G SPN V +N L+ G+ N + A ++F ++ GL P E +Y
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 195 MIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMG 254
+++G + + A+ +Y +K G +I+ K + AV L++M G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 255 CQHSSIL-GTLLQAYEKAGRTDNVPRIL----------KGSLYQHVLFNLT--------- 294
+ L+ + K GR I+ G +Y +++N
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 295 ----------------SCSILVMAYVKHGLIDDAMKVL----GDKRWKDTVFEDNLYHLL 334
+ ++LV + K G + +A + + D +TV D L
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD----CL 549
Query: 335 ICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGI 394
I +SG A ++ M P +++ G EAEK +L +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 395 RLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLS 454
+D + + ++ K+G+L A ++ M Q+ I PD+Y Y ++ + G ++
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV-QRSILPDSYTYTSLISGLCRKGK-TVIA 667
Query: 455 YLYYKIL--KSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD 512
L+ K + + N+ +Y C ++ +A ++M G TP+I+T N M+D
Sbjct: 668 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 727
Query: 513 IYGKAKLFKRVRKLFS-MAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSV 571
Y + ++ L M + G ++ +YN ++ Y + K++ + + + +G
Sbjct: 728 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 787
Query: 572 SLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID---IYGEQGWINEVV 628
+S++ + +E +L+ D YT+N++I GE W ++V
Sbjct: 788 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 847
Query: 629 GVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 688
V+T L G+ D + + ++ +++ ++ EM + GI P+ Y +I L
Sbjct: 848 KVMTSL---GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 689 QR 690
R
Sbjct: 905 CR 906
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 136/675 (20%), Positives = 264/675 (39%), Gaps = 89/675 (13%)
Query: 44 CDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGL-----VCESAYSAMITIYTRLS 98
C+ P+V + +L+ +Y + ++++ F M G C + +++ +S
Sbjct: 119 CNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 99 LYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYN 158
++ +E+++ K+ P++ + +++N +G E++ ++ M ++G++P IV YN
Sbjct: 177 VWSFLKEMLK----RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 232
Query: 159 TLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHL 218
T++ Y K +AA L +K G++ D TY +I R+ + ++++
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 292
Query: 219 GYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVP 278
PN TLIN + A L++ML+ G +
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN-------------------- 332
Query: 279 RILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSC 338
HV FN L+ ++ G +A+K+ K + Y +L+
Sbjct: 333 ---------HVTFN-----ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 339 KDSGHLANAVKIYSHMH---ICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIR 395
+ A Y M +C G+ MID G EA L + GI
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITY---TGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Query: 396 LDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY 455
D++ ++ ++ + K G K A K+I + RIY
Sbjct: 436 PDIVTYSALINGFCKVGRFKTA----------KEI---------VCRIY----------- 465
Query: 456 LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG 515
+ G++ N +Y +I C R + E R+++ M+ G T + T NV++
Sbjct: 466 ------RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519
Query: 516 KAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE 574
KA + G++ + +S++ +I YG + S EM G +
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTEL 634
Y S+L K G + + L+ + D YN ++ + G + + V + E+
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
Query: 635 KECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENG-IEPDKITYTNMITALQRNDK 693
+ + PD +Y +LI G A+ KE G + P+K+ YT + + + +
Sbjct: 640 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Query: 694 FLEAIKWSLWMKQIG 708
+ I + M +G
Sbjct: 700 WKAGIYFREQMDNLG 714
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 149/730 (20%), Positives = 299/730 (40%), Gaps = 58/730 (7%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNV 66
+S G N FN LI G + K F+MM + P+ ++G+L+ K+
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 67 EEAEFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVM 125
+ A + +M++ G+ V Y+ MI + ++A ++ + +D + P++ + +
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 126 LNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGL 185
+N + + G+ + A+ ++ + G SPN + Y+TL+ ++ ++ A R++ ++ G
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504
Query: 186 EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVN 245
D T+ ++ +AG EA+ + + + G PN + LIN + + A +
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 246 TLDDMLNMGCQHSSIL--GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
D+M +G H + G+LL+ K G + LK + + L+ A
Sbjct: 565 VFDEMTKVG-HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSH---------- 353
K G + A+ + G+ + + + Y LI G A+
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 354 --MHIC--DG----------------------KPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
M+ C DG P++ MID YS MG + L
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
+ + +L + +++ Y K + + + ++ I PD ++ +
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI-ILNGILPDKLTCHSLVLGICES 802
Query: 448 GMLDKLSYLYYKILKS----GITWNQELYDCVIN-CCARALPIDELSRVFD---EMLQHG 499
ML+ + KILK+ G+ ++ ++ +I+ CCA E++ FD M G
Sbjct: 803 NMLE----IGLKILKAFICRGVEVDRYTFNMLISKCCANG----EINWAFDLVKVMTSLG 854
Query: 500 FTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMS 558
+ + T + M+ + + F+ R + K G+ + Y +I + ++++
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 559 STVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIY 618
+EM A ++M+ A K G+ + +LR M + ++ ++ +
Sbjct: 915 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974
Query: 619 GEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDK 678
+ G + E + + + CGL+ DL SYN LI G + A L +EM+ +G +
Sbjct: 975 CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034
Query: 679 ITYTNMITAL 688
TY +I L
Sbjct: 1035 TTYKALIRGL 1044
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 184/419 (43%), Gaps = 14/419 (3%)
Query: 298 ILVMAYVKHGLIDDAMKV---LGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHM 354
IL+ Y++ G+I D++++ +G + +V+ N ++ S SG + M
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA---ILGSVVKSGEDVSVWSFLKEM 184
Query: 355 ---HICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKA 411
IC P++ +I+ G F ++ L ++ SG ++ + V+ Y K
Sbjct: 185 LKRKIC---PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 412 GSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQEL 471
G K A +L+ M K K ++ D Y ++ + + K L + K I N+
Sbjct: 242 GRFKAAIELLDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 472 YDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAK 531
Y+ +IN + + S++ +EML G +PN +T N ++D + FK K+F M +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 532 KLGLVDV-ISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQME 590
GL +SY ++ +N + M+ +G V Y M+D K G ++
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 591 NFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLI 650
+L M + D TY+ +I+ + + G ++ + GL P+ Y+TLI
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 651 KAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
G +++A+ + + M G D T+ ++T+L + K EA ++ M G+
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 163/360 (45%), Gaps = 10/360 (2%)
Query: 355 HICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSL 414
+C+ P+++ + +I Y GM ++ +++ + G + ++ VK+G
Sbjct: 117 RLCNSNPSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED 174
Query: 415 KDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDC 474
+ L+ M K+K I PD + ++ + G +K SYL K+ KSG Y+
Sbjct: 175 VSVWSFLKEMLKRK-ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 233
Query: 475 VINCCARALPIDELSRVFDEMLQHGFTPNIITLNVML-DIYGKAKLFKRVRKLFSMAKKL 533
V++ + + D M G ++ T N+++ D+ ++ K L M K++
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 534 GLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFK 593
+ ++YNT+I + + S + EM G S + +N+++D + EG NFK
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG---NFK 350
Query: 594 NVLRR---MKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLI 650
L+ M+ T +Y +++D + + G +K G+ +Y +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 651 KAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
G +++AV L+ EM ++GI+PD +TY+ +I + +F A + + ++GL
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 2/247 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G +++ FN LI C G + +M + + T ++ + ++ +E+
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
++M K G+ ES Y +I R+ + A V + K+ P M+ A
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
++ GK +EA L+L M + P I ++ TLM K N+ A L + + + GL+ D
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLI-NLHAKYEDEEGAVNTL 247
+Y +I G G+ A Y+E+K G+ NA+ LI L A+ GA L
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Query: 248 DDMLNMG 254
D+L G
Sbjct: 1059 KDLLARG 1065
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 16/231 (6%)
Query: 4 EVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATF-GMLMGL--- 59
+V SLG L+ + ++ N+ + H M + + P + G++ GL
Sbjct: 848 KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV 907
Query: 60 --YKKSWNVEEAEFAFNQMRKLGLVCES--AYSAMITIYTRLSLYEKAEEVIRLIREDKV 115
K ++ V+E A +C A SAM+ + ++A ++R + + K+
Sbjct: 908 GDIKTAFVVKEEMIAHK-------ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 960
Query: 116 VPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQR 175
VP + ++ +++ + G + EA + V M G ++V+YN L+TG +M A
Sbjct: 961 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1020
Query: 176 LFLSIKDVGLEPDETTYRSMIEG-WGRAGNYREAKWYYKELKHLGYKPNAS 225
L+ +K G + TTY+++I G R + A K+L G+ + S
Sbjct: 1021 LYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMS 1071
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 238/528 (45%), Gaps = 7/528 (1%)
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNT 246
P + + R Y + K ++ G + + + +IN + + + A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 247 LDDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVK 305
L +G + +I TL+ + GR ++ + +L + S L+
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 306 HGLIDDAMKVLGDKRWKDTVFEDNLYHLLICS--CKDSGHLANAVKIYSHMHICDGKPNL 363
G + +A+ VL D+ + D + + + + CK SG+ A A+ ++ M + K ++
Sbjct: 188 KGRVSEAL-VLIDRMVEYGFQPDEVTYGPVLNRLCK-SGNSALALDLFRKMEERNIKASV 245
Query: 364 HIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLET 423
+ID+ G F +A L+ ++ GI+ D++ ++ ++ G D +L
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 424 MEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARAL 483
M ++I PD + ++ ++ + G L + LY +++ GI + Y+ +I+ +
Sbjct: 306 M-IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 484 PIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYN 542
+ E +++FD M+ G P+I+T +++++ Y KAK +LF GL+ + I+YN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 543 TIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKET 602
T++ + Q+ L + QEM G S+ Y +LD G++ + +M+++
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 603 SCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDA 662
T YNI+I +++ + L + G++PD+ +YN +I G + +A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 663 VGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
L ++M+E+G PD TY +I A + +++ MK G
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 217/516 (42%), Gaps = 40/516 (7%)
Query: 71 FAFNQM-RKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIR---EDKVVPNLENWLVML 126
FAF+ + R L E T+ L + E + L+ E K P+L ++
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
N +G++ EA +++ M E GF P+ V Y ++ K N A LF +++ ++
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNT 246
Y +I+ + G++ +A + E++ G K +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV---------------------- 280
Query: 247 LDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKH 306
+SS++G L G+ D+ ++L+ + ++++ ++ + S L+ +VK
Sbjct: 281 --------VTYSSLIGGLCN----DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 307 GLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIM 366
G + +A ++ + + + Y+ LI L A +++ M +P++
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 367 CTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK 426
+I++Y + +L+ + S G+ + I + +V + ++G L A + + M
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM-V 447
Query: 427 QKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPID 486
+ + P Y +L G L+K ++ K+ KS +T +Y+ +I+ A +D
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 487 ELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTII 545
+ +F + G P+++T NVM+ K LF K+ G D +YN +I
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 546 AAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLD 581
A+ L S ++EM+ GFS ++D
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 180/427 (42%), Gaps = 36/427 (8%)
Query: 19 NTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRK 78
+TLI +G V M+E QP+ T+G +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV---------------------- 216
Query: 79 LGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEA 138
L +C+S SA+ L L+ K EE R I+ V + +++++ + G ++A
Sbjct: 217 LNRLCKSGNSAL-----ALDLFRKMEE--RNIKASVV-----QYSIVIDSLCKDGSFDDA 264
Query: 139 ELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEG 198
+ M G ++V Y++L+ G + ++ + + PD T+ ++I+
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 199 WGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHS 258
+ + G EAK Y E+ G P+ +LI+ K A D M++ GC+
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 259 SIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLG 317
+ L+ +Y KA R D+ R+ + + ++ N + + LV+ + + G ++ A ++
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 318 DKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMG 377
+ + Y +L+ D+G L A++I+ M + I +I
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 378 MFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLY 437
+A L+ +L G++ D++ + V++ K GSL +A + M K+ PD + Y
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTY 563
Query: 438 CDMLRIY 444
++R +
Sbjct: 564 NILIRAH 570
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+N+LI K C+ + F +M+ +P++ T+ +L+ Y K+ V++ F ++
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 78 KLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
GL+ + Y+ ++ + + A+E+ + + V P++ + ++L+ G+L
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMI 196
+A + M+++ + I YN ++ G S ++ A LF S+ D G++PD TY MI
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLH 234
G + G+ EA ++++K G P+ LI H
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/521 (18%), Positives = 210/521 (40%), Gaps = 36/521 (6%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
LG + + F+TL+ G V M+E +P++ T L+ V E
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 69 AEFAFNQMRKLGLVC-ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
A ++M + G E Y ++ + A ++ R + E + ++ + ++++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
+ + G ++A + M G ++V Y++L+ G + ++ + + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 188 DETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTL 247
D T+ ++I+ + + G EAK Y E+ G P+ +LI+ K A
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 248 DDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
D M++ GC+ ++ + SIL+ +Y K
Sbjct: 374 DLMVSKGCEP----------------------------------DIVTYSILINSYCKAK 399
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
+DD M++ + K + Y+ L+ SG L A +++ M P++
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQ 427
++D G +A +++ ++ S + L + + +++ A + DA ++ ++
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS-D 518
Query: 428 KDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDE 487
K ++PD Y M+ + G L + L+ K+ + G T + Y+ +I +
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 488 LSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
+ +EM GF+ + T+ +++D+ +L K + S
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 83/164 (50%)
Query: 528 SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEG 587
SM + L I +N + +A + K + + + M+ +G + M++ Y ++
Sbjct: 60 SMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKK 119
Query: 588 QMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYN 647
++ +VL R + D T++ +++ + +G ++E V ++ + E RPDL + +
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 179
Query: 648 TLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
TLI + G V +A+ L+ M E G +PD++TY ++ L ++
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
+ RE+ S G N +NTL+ + G + + F M+ V P+V T+G+L+
Sbjct: 407 LFREIS-SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 61 KKSWNVEEAEFAFNQMRK----LGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV 116
+ + +A F +M+K LG+ Y+ +I S + A + + + V
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGI---GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 117 PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRL 176
P++ + VM+ ++G L EA+++ M+E G +P+ YN L+ + S + ++ L
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 177 FLSIKDVGLEPDETTYRSMIE 197
+K G D +T + +I+
Sbjct: 583 IEEMKVCGFSADSSTIKMVID 603
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/599 (23%), Positives = 257/599 (42%), Gaps = 47/599 (7%)
Query: 27 KRGCVELGAKWFHMMLECDVQPNVA-TFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVC-E 84
+ CV L +F + ++ + TF +++ V+ ++ QM+ G C E
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE 111
Query: 85 SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVS 144
+ ++I++Y ++ L E+A E+ I+E P+++ + +L+ + +++ +V
Sbjct: 112 DLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 145 MREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL-------------------SIKDVGL 185
M+ GF PN+ YN L+ K + ++ A++L + S+ +VGL
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 186 -----------EPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLH 234
EP + Y ++I G + +Y+ A +E+ G PN + TLIN+
Sbjct: 232 VKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 235 AKYEDEEGAVNTLDDMLNMGCQHSSI--LGTLLQAYEKAGRT----DNVPRILKGSLYQH 288
E A + L ML GC H +I L +L++ G T D ++++G Q
Sbjct: 292 CNSGQIELAFSFLTQMLKRGC-HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 289 VLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAV 348
N+ + + LV + HG I A+ V Y LI G L AV
Sbjct: 351 ---NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 349 KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
I++ M PN+ + M++ F EAE L + + F ++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 409 VKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWN 468
AG L A V ME+Q P+ Y ++L + +++ L +I G+ W+
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 469 QELYDCVIN-CCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIY---GKAKLFKRVR 524
Y+ +++ C LP L V +M+ G +P+ IT+N+++ Y GKA+ ++
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLV-GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 525 KLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAY 583
L S ++ DVISY +I ++ E ++ M G S+ ++ +++ +
Sbjct: 587 DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 123/586 (20%), Positives = 244/586 (41%), Gaps = 34/586 (5%)
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
VM+ + G+++ + +L M+ GF + + ++++ Y +V E A +F IK+
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
G +P Y +++ + Y+++K G++PN L+ K +GA
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 244 VNTLDDMLNMGCQHSSI-----------LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFN 292
L +M N GC ++ +G + + E A R + V S+Y ++
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV-----SVYNALING 255
Query: 293 LTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYS 352
L A+ + M+ + +K V Y LI +SG + A +
Sbjct: 256 LCKEHDYKGAF-------ELMREMVEKGISPNVIS---YSTLINVLCNSGQIELAFSFLT 305
Query: 353 HMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNL-KSSGIRLDLIAFTVVVRMYVKA 411
M PN++ + +++ + G +A L+ + + G++ +++A+ +V+ +
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 412 GSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQEL 471
G++ A +V ME + P+ Y ++ + + G LD Y++ K+L SG N +
Sbjct: 366 GNIVKAVSVFSHME-EIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 472 YDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAK 531
Y ++ R E + + M + P++ T N + A K+F +
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 532 KLGLV--DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQM 589
+ ++++YN ++ + +E +E+ G S YN++L G
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 590 ENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLR---PDLCSY 646
++ +M + D T N++I Y +QG +L +L CG R PD+ SY
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISY 603
Query: 647 NTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRND 692
+I + ED V L++ M GI P T++ +I +D
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDD 649
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 157/366 (42%), Gaps = 68/366 (18%)
Query: 399 IAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYY 458
+ F V++R G + +L+ M K + L+ ++ +Y+Q G+ ++ ++Y
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCSEDLFISVISVYRQVGLAERAVEMFY 135
Query: 459 KILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAK 518
+I + G + ++Y+ V++ I + V+ +M + GF PN+ T NV+L K
Sbjct: 136 RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 519 LFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQ----------NKNLESMSST------- 560
+KL M+ K D +SY T+I++ + + E + S
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALING 255
Query: 561 -------------VQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFD 607
++EM G S ++ +Y+++++ GQ+E + L +M + C +
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 608 HYT------------------------------------YNIMIDIYGEQGWINEVVGVL 631
YT YN ++ + G I + V V
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
+ ++E G P++ +Y +LI + G ++ AV + +M +G P+ + YTNM+ AL R+
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 692 DKFLEA 697
KF EA
Sbjct: 436 SKFKEA 441
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 146/324 (45%), Gaps = 19/324 (5%)
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
A+KL + + + G D +++T V+ + G +K E E + EP +Y ++
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK------EGRELAERFEPVVSVYNALI 253
Query: 442 RIYQQCGMLDKLSY-----LYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEML 496
G+ + Y L ++++ GI+ N Y +IN + I+ +ML
Sbjct: 254 N-----GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 497 QHGFTPNIITLNVMLD-IYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNL 554
+ G PNI TL+ ++ + + F + M + GL +V++YNT++ + + N+
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 555 ESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIM 614
S M+ G S ++ Y S+++ + K G ++ + +M + C + Y M
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 615 IDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEM-RENG 673
++ E ++ + + P + ++N IK AG ++ A + ++M +++
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 674 IEPDKITYTNMITALQRNDKFLEA 697
P+ +TY ++ L + ++ EA
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEA 512
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
MIR G + N +NTL+ G + F M E PN+ T+G L+ +
Sbjct: 342 MIR----GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 61 KKSWNVEEAEFAFNQMRKLGLVCES--AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPN 118
K +++ A + +N+M G C + Y+ M+ R S +++AE +I ++ ++ P+
Sbjct: 398 AKRGSLDGAVYIWNKMLTSG-CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 119 LENWLVMLNAYSQQGKLEEAELVLVSM-REAGFSPNIVAYNTLMTGYGKVSNMEAAQRLF 177
+ + + G+L+ AE V M ++ PNIV YN L+ G K + +E A L
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 178 LSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKY 237
I G+E +TY +++ G AG A ++ G P+ + +I + K
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 238 EDEEGAVNTLD 248
E A LD
Sbjct: 577 GKAERAAQMLD 587
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 178/417 (42%), Gaps = 51/417 (12%)
Query: 17 LFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQM 76
L N L + +G EL M+E + PNV ++ L+ + S +E A QM
Sbjct: 252 LINGLCKEHDYKGAFEL----MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 77 RKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
K G C IYT SL + +R D L+ W M+ +
Sbjct: 308 LKRG--CHP------NIYTLSSLVKGC--FLRGTTFDA----LDLWNQMIRGF------- 346
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMI 196
G PN+VAYNTL+ G+ N+ A +F ++++G P+ TY S+I
Sbjct: 347 ------------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNA---SNLYTLINLHAKYEDEEGAVNTLDDMLNM 253
G+ + G+ A + + ++ G PN +N+ + H+K+++ E + + M
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI---EIMSKE 451
Query: 254 GCQHS-SILGTLLQAYEKAGRTDNVPRILKGSLYQH-VLFNLTSCSILVMAYVKHGLIDD 311
C S ++ AGR D ++ + QH N+ + + L+ K I++
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 312 AMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGK-PNLHIMCTMI 370
A + + + + + Y+ L+ ++G A+++ M + DGK P+ M +I
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMV-DGKSPDEITMNMII 570
Query: 371 DTYSVMGMFTEAEKLYLNLKSSGI---RLDLIAFTVVVRMYVKAGSLKDACAVLETM 424
Y G A ++ L+L S G R D+I++T V+ ++ +D +LE M
Sbjct: 571 LAYCKQGKAERAAQM-LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 146/344 (42%), Gaps = 11/344 (3%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLM-GLYKKSWNVEE 68
G N ++TLI G +EL + ML+ PN+ T L+ G + + +
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 69 AEFAFNQMRKLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
+ +R GL AY+ ++ + KA V + E PN+ + ++N
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
++++G L+ A + M +G PN+V Y ++ + S + A+ L + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 188 DETTYRSMIEGWGRAGNYREAKWYYKELKHLGY-KPNASNLYTLINLHAKYEDEEGAVNT 246
T+ + I+G AG A+ +++++ PN L++ AK E A
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 247 LDDMLNMGCQ-HSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVK 305
++ G + SS TLL AG +++ + + + +++++AY K
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 306 HGLIDDAMKVL-----GDKRWKDTV--FEDNLYHLLICSCKDSG 342
G + A ++L G ++W+ V + + ++ L +C++ G
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%)
Query: 575 AYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTEL 634
+ M+ +GQ+++ + +L++MK + +I +Y + G V + +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 635 KECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKF 694
KE G P + YN ++ ++ + ++M+ +G EP+ TY ++ AL +N+K
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 695 LEAIKWSLWMKQIG 708
A K + M G
Sbjct: 198 DGAKKLLVEMSNKG 211
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMM-LECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQM 76
FN I G ++ K F M + PN+ T+ L+ K+ +EEA ++
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 77 RKLGLV-CESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKL 135
G+ S Y+ ++ L A +++ + D P+ +++ AY +QGK
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 136 EEAE--LVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYR 193
E A L LVS + P++++Y ++ G + + E L + G+ P T+
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 194 SMI 196
+I
Sbjct: 640 VLI 642
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 230/484 (47%), Gaps = 7/484 (1%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
++TLI + K G + W M + V ++ + L+ L ++ + +A F++++
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 78 KLGLVCE-SAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLE 136
+ G+ + AY++MI +Y + L+ +A +I+ + E V+PN ++ +L+ Y + K
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 137 EAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMI 196
EA V M+E + ++ N ++ YG++ ++ A RLF S++ + +EP+ +Y +++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 197 EGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ 256
+G A + EA ++ ++ + N T+I ++ K + E A N + +M + G +
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 257 HSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV 315
++I T++ + KAG+ D + + V + +++AY + GL+ A ++
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 316 LGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSV 375
L + + D + + +L +G A ++ ++ + MI+ YS
Sbjct: 493 LHELKLPDNIPRETAITIL----AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 376 MGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAY 435
+ +++ ++++G D +V+ Y K + A V M+++ + PD
Sbjct: 549 NQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDE- 607
Query: 436 LYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEM 495
++ ML +Y + + L+ ++ ++EL+ V RA +++ SRV + M
Sbjct: 608 VHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRM 667
Query: 496 LQHG 499
+ G
Sbjct: 668 RERG 671
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 152/291 (52%), Gaps = 4/291 (1%)
Query: 398 LIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDK-LSYL 456
+ A+ VV+R ++A A + + M +Q+ + PD Y Y ++ + + GM D LS+L
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEM-RQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 457 YYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGK 516
K+ + ++ + LY +I R + +F + + G TP+++ N M+++YGK
Sbjct: 214 Q-KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 517 AKLFKRVRKLFSMAKKLG-LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEA 575
AKLF+ R L + G L + +SY+T+++ Y +N S EM+ ++ L
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 576 YNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELK 635
N M+D YG+ ++ + +++ + +YN ++ +YGE E + + ++
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 636 ECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMIT 686
+ ++ +YNT+IK YG E A LV+EM+ GIEP+ ITY+ +I+
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/593 (20%), Positives = 249/593 (41%), Gaps = 81/593 (13%)
Query: 86 AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSM 145
AY+ ++ R ++ A + +R+ + P+ + ++ ++ ++G + A L M
Sbjct: 157 AYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 146 REAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNY 205
+ S ++V Y+ L+ ++ + A +F +K G+ PD Y SMI +G+A +
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 206 REAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLL 265
REA+ KE+ G PN + TL++++ + A++ +M + C
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA--------- 327
Query: 266 QAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTV 325
+LT+C+I++ Y + ++ +A ++ W
Sbjct: 328 -------------------------LDLTTCNIMIDVYGQLDMVKEADRLF----WS--- 355
Query: 326 FEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKL 385
+ D +PN+ T++ Y +F EA L
Sbjct: 356 ----------------------------LRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 386 YLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQ 445
+ ++ I +++ + ++++Y K + A +++ M+ + IEP+A Y ++ I+
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ-SRGIEPNAITYSTIISIWG 446
Query: 446 QCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNII 505
+ G LD+ + L+ K+ SG+ +Q LY +I R + R+ E+ P+ I
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNI 502
Query: 506 TLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQEM 564
+ I KA + +F A + G V D+ + +I Y +N+ ++ ++M
Sbjct: 503 PRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKM 562
Query: 565 QFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWI 624
+ G+ +L+AYGK+ + E V R M+E C F + M+ +Y +
Sbjct: 563 RTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDF 622
Query: 625 NEVVGVLTELKECGLRPDLCS---YNTLIKAYGIAGMVEDAVGLVKEMRENGI 674
V + L+ P++ S + + Y A + DA ++ MRE GI
Sbjct: 623 EMVESLFQRLES---DPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 219/482 (45%), Gaps = 26/482 (5%)
Query: 230 LINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHV 289
L +L + Y+D + ++ + +L+ L L +E+A T +V Y V
Sbjct: 108 LFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSV------FAYNVV 161
Query: 290 LFNLTSCSILVMAYVKHGLIDD-AMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAV 348
L N+ +A HGL D+ + L R+ Y LI S G +A+
Sbjct: 162 LRNVLRAKQFDIA---HGLFDEMRQRALAPDRYT--------YSTLITSFGKEGMFDSAL 210
Query: 349 KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
M +L + +I+ + +++A ++ LK SGI DL+A+ ++ +Y
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 409 VKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY-QQCGMLDKLSYLYYKILKSGITW 467
KA ++A +++ M + + P+ Y +L +Y + L+ LS ++ ++ +
Sbjct: 271 GKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKFLEALS-VFAEMKEVNCAL 328
Query: 468 NQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLF 527
+ + +I+ + + E R+F + + PN+++ N +L +YG+A+LF LF
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 528 SMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKE 586
+ ++ + +V++YNT+I YG+ E ++ VQEMQ G + Y++++ +GK
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 587 GQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSY 646
G+++ + ++++ + D Y MI Y G + +L ELK PD
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPR 504
Query: 647 NTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQ 706
T I AG E+A + ++ E+G D + MI RN +++ I+ M+
Sbjct: 505 ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
Query: 707 IG 708
G
Sbjct: 565 AG 566
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 179/406 (44%), Gaps = 14/406 (3%)
Query: 297 SILVMAYVKHGLIDDAM----KVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYS 352
S L+ ++ K G+ D A+ K+ D+ D V NL L C S A+ I+S
Sbjct: 194 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS----KAISIFS 249
Query: 353 HMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAG 412
+ P+L +MI+ Y +F EA L + +G+ + ++++ ++ +YV+
Sbjct: 250 RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENH 309
Query: 413 SLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELY 472
+A +V M K+ + D M+ +Y Q M+ + L++ + K I N Y
Sbjct: 310 KFLEALSVFAEM-KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 473 DCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKK 532
+ ++ A E +F M + N++T N M+ IYGK ++ L +
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 533 LGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMEN 591
G+ + I+Y+TII+ +G+ L+ ++ Q+++ G + Y +M+ AY + G M +
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGH 488
Query: 592 FKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIK 651
K +L +K D+ I I + G E V + E G D+ + +I
Sbjct: 489 AKRLLHELKLP----DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN 544
Query: 652 AYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
Y + + + ++MR G PD ++ A + +F +A
Sbjct: 545 LYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 121/272 (44%), Gaps = 10/272 (3%)
Query: 14 NFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAF 73
N +NT+I K E M ++PN T+ ++ ++ K+ ++ A F
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Query: 74 NQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNL--ENWLVMLNAYS 130
++R G+ + + Y MI Y R+ L A+ RL+ E K+ N+ E + +L +
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK---RLLHELKLPDNIPRETAITIL---A 512
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
+ G+ EEA V E+G +I + ++ Y + +F ++ G PD
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
++ +G+ + +A Y+E++ G + +++L++ +D E + +
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632
Query: 251 LNMGCQHSSILGTLLQA-YEKAGRTDNVPRIL 281
+ +S L ++ A YE+A + ++ R++
Sbjct: 633 ESDPNVNSKELHLVVAALYERADKLNDASRVM 664
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 58/110 (52%)
Query: 600 KETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMV 659
+E T + YN+++ + G+ E+++ L PD +Y+TLI ++G GM
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 660 EDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
+ A+ +++M ++ + D + Y+N+I +R + +AI +K+ G+
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/573 (21%), Positives = 252/573 (43%), Gaps = 47/573 (8%)
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
++ N S K+++A + M ++ P+IV +N L++ K++ E L ++ +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
G+ D TY I + R A ++ LGY+P+ L +L+N + + A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 244 VNTLDDMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMA 302
V +D M+ MG + + TL+ + ++ + + +L + +V
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 303 YVKHGLIDDAMKVLGD---KRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG 359
K G ID A+ +L R K V +++ +I S H+ AV +++ M
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVV---IFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 360 KPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACA 419
+PN+ ++I+ G +++A +L N+ I +++ F ++ + K G L +A
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 420 VLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCC 479
+ E M Q+ I+PD + Y +L +G + L
Sbjct: 350 LHEEM-IQRSIDPDT---------------------ITYNLLINGFCMHNRL-------- 379
Query: 480 ARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DV 538
DE ++F M+ PNI T N +++ + K K + +LF + GLV +
Sbjct: 380 ------DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 539 ISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRR 598
++Y TII + Q + +S ++M + + Y+ +L G+++ + +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 599 MKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGM 658
++++ + + YN MI+ + G + E + L ++PD+ +YNT+I +
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 659 VEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
+++A L ++M+E+G P+ TY +I A R+
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/543 (22%), Positives = 235/543 (43%), Gaps = 9/543 (1%)
Query: 31 VELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCE-SAYSA 89
V+ F M++ P++ F L+ K E QM+ LG+ + YS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 90 MITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAG 149
I + R S A V+ + + P++ +LN Y ++ +A ++ M E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 150 FSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAK 209
+ P+ + TL+ G + A L + G +PD TY +++ G + G+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 210 WYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAY 268
+++ K N T+I+ KY E AV+ +M G + + + +L+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 269 EKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFED 328
GR + R+L L + + N+ + + L+ A+ K G + +A K L ++ + ++ D
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK-LHEEMIQRSIDPD 362
Query: 329 NL-YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
+ Y+LLI L A +++ M D PN+ T+I+ + + +L+
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
+ G+ + + +T +++ + +AG A V + M + + D Y +L
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSY 481
Query: 448 GMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITL 507
G LD ++ + KS + N +Y+ +I +A + E +D P+++T
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE---AWDLFCSLSIKPDVVTY 538
Query: 508 NVMLDIYGKAKLFKRVRKLFSMAKKLG-LVDVISYNTIIAAYGQNKNLESMSSTVQEMQF 566
N M+ +L + LF K+ G L + +YNT+I A ++ + + + ++EM+
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 567 DGF 569
GF
Sbjct: 599 SGF 601
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 173/406 (42%), Gaps = 13/406 (3%)
Query: 7 MSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLM-GLYKKSWN 65
+ +G K + F TLI+ M++ QP++ T+G ++ GL K+
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG-- 237
Query: 66 VEEAEFAFNQMRKLGLVCESAYSAMI-TIYTRLSLYEKAEEVIRLIRE---DKVVPNLEN 121
+ + A N + K+ A + TI L Y E + L E + PN+
Sbjct: 238 --DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 122 WLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIK 181
+ ++N G+ +A +L +M E +PN+V +N L+ + K + A++L +
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 182 DVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEE 241
++PD TY +I G+ EAK +K + PN TLIN K + E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 242 GAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILV 300
V +M G +++ T++Q + +AG D+ + K + V ++ + SIL+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 301 MAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGK 360
+G +D A+ + + + +Y+ +I +G + A ++ + I K
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---K 532
Query: 361 PNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVR 406
P++ TMI + EA+ L+ +K G + + ++R
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/538 (20%), Positives = 223/538 (41%), Gaps = 28/538 (5%)
Query: 4 EVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKS 63
E +LG + ++ I +R + L M++ +P++ T L+ Y S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 64 WNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV-----PN 118
+ +A +QM ++G ++ T+ L L+ KA E + L+ D++V P+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTF--TFTTLIHGLFLHNKASEAVALV--DQMVQRGCQPD 222
Query: 119 LENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
L + ++N ++G ++ A +L M A N+V +NT++ K ++E A LF
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
++ G+ P+ TY S+I G + +A + PN LI+ K
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Query: 239 DEEGAVNTLDDMLNMGCQHSSILGTLL-QAYEKAGRTDNVPRILKGSLYQHVLFNLTSCS 297
A ++M+ +I LL + R D ++ K + + L N+ + +
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 298 ILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHIC 357
L+ + K ++D +++ + + V Y +I +G +A ++ M +
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VS 461
Query: 358 DGKPNLHIMCTMIDTYSVM-------GMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVK 410
+ P T I TYS++ G A ++ L+ S + L++ + ++ K
Sbjct: 462 NRVP------TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 411 AGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQE 470
AG + +A + ++ I+PD Y M+ +L + L+ K+ + G N
Sbjct: 516 AGKVGEAWDLFCSLS----IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 471 LYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFS 528
Y+ +I R + + EM GF + T++++ ++ +L K + S
Sbjct: 572 TYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNMLS 629
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 3/245 (1%)
Query: 464 GITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRV 523
GI+ + Y INC R + V +M++ G+ P+I+TL+ +L+ Y +K
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 524 RKLFSMAKKLGL-VDVISYNTIIAA-YGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLD 581
L ++G D ++ T+I + NK E+++ V +M G L Y ++++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA-LVDQMVQRGCQPDLVTYGTVVN 231
Query: 582 AYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRP 641
K G ++ N+L +M+ + +N +ID + + V + TE++ G+RP
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 642 DLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWS 701
++ +YN+LI G DA L+ M E I P+ +T+ +I A + K +EA K
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 702 LWMKQ 706
M Q
Sbjct: 352 EEMIQ 356
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 161/372 (43%), Gaps = 16/372 (4%)
Query: 346 NAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVV 405
+AV ++ M P++ ++ + M F L +++ GI DL +++ +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 406 RMYVKAGSLKDACAVLETMEKQKDIEPDAYL-------YCDMLRIYQQCGMLDKLSYLYY 458
+ + L A AVL M K EPD YC RI ++D++ + Y
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 459 KILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD-IYGKA 517
K T+ ++ ++ A E + D+M+Q G P+++T +++ + +
Sbjct: 185 K--PDTFTFTTLIHGLFLHNKA-----SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 518 KLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYN 577
+ + L M +V+ +NTII + + +++E EM+ G ++ YN
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 578 SMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKEC 637
S+++ G+ + +L M E + T+N +ID + ++G + E + E+ +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 638 GLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEA 697
+ PD +YN LI + + +++A + K M P+ TY +I + + +
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 698 IKWSLWMKQIGL 709
++ M Q GL
Sbjct: 418 VELFREMSQRGL 429
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 572 SLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVL 631
S+ +N +L A K + E ++ +M+ + D YTY+I I+ + + ++ + VL
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
++ + G PD+ + ++L+ Y + + DAV LV +M E G +PD T+T +I L +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 692 DKFLEAIKWSLWMKQIGLQ 710
+K EA+ M Q G Q
Sbjct: 202 NKASEAVALVDQMVQRGCQ 220
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 138/695 (19%), Positives = 288/695 (41%), Gaps = 57/695 (8%)
Query: 16 QLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQ 75
+ N L+ + G + + + + +P+ +T+ L+ + K+ ++ A +
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 76 MRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKL 135
M L + ++ Y+ L K E + L+ + VP+ + +++ +
Sbjct: 261 MSLANLRMD-GFTLRCFAYS-LCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 136 EEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSM 195
EEA L MR PN+V Y+TL+ G + +R+ + G P + S+
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 196 IEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGC 255
+ + +G++ A K++ G+ P Y + N+ G++ D LN
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPG----YVVYNILI------GSICGDKDSLNCD- 427
Query: 256 QHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKV 315
LL EKA L V+ N + S G + A V
Sbjct: 428 --------LLDLAEKA---------YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 470
Query: 316 LGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSV 375
+ + + + + + Y ++ ++ + A ++ M +++ M+D++
Sbjct: 471 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK 530
Query: 376 MGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAY 435
G+ +A K + ++ G +++ +T ++ Y+KA + A + ETM + + P+
Sbjct: 531 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIV 589
Query: 436 LYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEM 495
Y ++ + + G ++K ++ ++ S + ++Y F +
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY-------------------FKQY 630
Query: 496 LQHGFTPNIITLNVMLDIYGKAKLFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQNKNL 554
+ PN++T +LD + K+ + RKL +M+ + + I Y+ +I + L
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 555 ESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIM 614
+ EM GF +L Y+S++D Y K + + VL +M E SC + Y M
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 615 IDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGI 674
ID + G +E ++ ++E G +P++ +Y +I +G+ G +E + L++ M G+
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 675 EPDKITYTNMIT------ALQRNDKFLEAIKWSLW 703
P+ +TY +I AL LE +K + W
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 151/650 (23%), Positives = 278/650 (42%), Gaps = 67/650 (10%)
Query: 87 YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMR 146
Y+A++ + R + EE ++ IR+D E V++ + + G A L ++
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 147 EAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYR 206
+ F P+ YN L+ + K +++A + + L D T R + G +R
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 207 EAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGC-----QHSSIL 261
EA ++ + P+ LI+ + E A++ L+ M C +S++L
Sbjct: 288 EALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 262 GTLLQAYEKAGRTDNVPRIL--KGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDK 319
L ++ GR V ++ +G +FN LV AY G A K+L
Sbjct: 345 CGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFN-----SLVHAYCTSGDHSYAYKLLK-- 396
Query: 320 RWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHM--HICDGKPNLHIMCTMIDTYSVMG 377
++ C GH+ V +Y+ + IC K +L+ C ++D
Sbjct: 397 ------------KMVKC-----GHMPGYV-VYNILIGSICGDKDSLN--CDLLDL----- 431
Query: 378 MFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLY 437
AEK Y + ++G+ L+ I + R AG + A +V+ M Q I PD Y
Sbjct: 432 ----AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI-PDTSTY 486
Query: 438 CDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQ 497
+L ++ L+ ++ + G+ + Y +++ +A I++ + F+EM +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 498 HGFTPNIITLNVMLDIYGKAKLFKRVRKLF-SMAKKLGLVDVISYNTIIAAYGQNKNLES 556
G TPN++T ++ Y KAK +LF +M + L ++++Y+ +I + + +E
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 557 MSSTVQEM--------------QFDGFS--VSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
+ M Q+D S ++ Y ++LD + K ++E + +L M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVE 660
C + Y+ +ID + G ++E V TE+ E G L +Y++LI Y +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 661 DAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
A ++ +M EN P+ + YT MI L + K EA K M++ G Q
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 87 YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMR 146
Y+ MI ++ ++A ++++++ E PN+ + M++ + GK+E +L M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 147 EAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYR 206
G +PN V Y L+ K ++ A L +K YR +IEG+ + +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 864
Query: 207 EAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGC---QHSSILGT 263
E+ E+ P S LI+ K + E A+ L+++ +SS +
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVL 316
L+++ A + + ++ + V+ + S L+ ++ I +A+ +L
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 99/262 (37%), Gaps = 40/262 (15%)
Query: 32 ELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES---AYS 88
+L +K MLE PNV + ++ K +EA M + G C+ Y+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNVVTYT 783
Query: 89 AMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREA 148
AMI + + E E++ + V PN + V+++ + G L+ A +L M++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 149 GFSPNIVAYNTLMTGYGK---------------------------VSNMEAAQRLFLSIK 181
+ + Y ++ G+ K + N+ AQRL ++++
Sbjct: 844 HWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 182 --------DVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINL 233
L +TY S+IE A A + E+ G P + +LI
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Query: 234 HAKYEDEEGAVNTLDDMLNMGC 255
+ A+ LD + +M C
Sbjct: 964 LFRNSKISEALLLLDFISHMVC 985
Score = 37.7 bits (86), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + N + +I G +E + M V PN T+ +L+ K+ ++ A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 70 EFAFNQMRKLGLVCESA-YSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
+M++ +A Y +I + + + ++ ++ I +D P L + ++++
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIV----AYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
+ +LE A +L + A FS +V YN+L+ + +E A +LF + G
Sbjct: 892 LIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHL 218
+ P+ ++ S+I+G R EA + H+
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 40/406 (9%)
Query: 341 SGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIA 400
+G L K +M P++ T+I + +G +A K+ L+ SG D+I
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 401 FTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKI 460
+ V++ Y KAG + +A +VL+ M + PD Y +LR G L + + ++
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 461 LKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLD-IYGKAKL 519
L+ + Y +I R + ++ DEM G TP+++T NV+++ I + +L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 520 FKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE----- 574
+ ++ L M +VI++N I+ + + +M GFS S+
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 575 ------------------------------AYNSMLDAYGKEGQMENFKNVLRRMKETSC 604
+YN +L + KE +M+ L RM C
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 605 TFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVG 664
D TYN M+ + G + + V +L +L G P L +YNT+I AG A+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 665 LVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
L+ EMR ++PD ITY++++ L R K EAIK+ +++G++
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 207/448 (46%), Gaps = 7/448 (1%)
Query: 265 LQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDT 324
L+ + G + + L+ +Y + ++ C+ L+ + + G A K+L
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 325 VFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
V + Y+++I +G + NA+ + M + P++ T++ + G +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
+ + D+I +T+++ + + A +L+ M + + PD Y ++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGI 284
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINC-CARALPIDELSRVFDEMLQHGFTPN 503
+ G LD+ + SG N ++ ++ C+ +D ++ +ML+ GF+P+
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA-EKLLADMLRKGFSPS 343
Query: 504 IITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQ 562
++T N++++ + L R + + G + +SYN ++ + + K ++ ++
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
M G + YN+ML A K+G++E+ +L ++ C+ TYN +ID + G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 623 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYT 682
+ + +L E++ L+PD +Y++L+ G V++A+ E GI P+ +T+
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 683 NMITALQRNDKFLEAIKWSLWMKQIGLQ 710
+++ L ++ + AI + ++M G +
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 192/427 (44%), Gaps = 5/427 (1%)
Query: 263 TLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWK 322
TL++ + + G+T +IL+ + ++ + ++++ Y K G I++A+ VL
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS 201
Query: 323 DTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEA 382
V Y+ ++ S DSG L A+++ M D P++ +I+ A
Sbjct: 202 PDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 383 EKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLR 442
KL ++ G D++ + V+V K G L +A L M +P+ + +LR
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILR 317
Query: 443 IYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTP 502
G L +L+ G + + ++ +IN R + + ++M QHG P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 503 NIITLNVMLDIYGKAKLFKR-VRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTV 561
N ++ N +L + K K R + L M + D+++YNT++ A ++ +E +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 562 QEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQ 621
++ G S L YN+++D K G+ +L M+ D TY+ ++ +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 622 GWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITY 681
G ++E + E + G+RP+ ++N+++ + + A+ + M G +P++ +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 682 TNMITAL 688
T +I L
Sbjct: 558 TILIEGL 564
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 215/510 (42%), Gaps = 39/510 (7%)
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
+ G+LEE L +M G P+I+ TL+ G+ ++ A ++ ++ G PD
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
TY MI G+ +AG A L + P+ V T + +
Sbjct: 174 TYNVMISGYCKAGEINNA---LSVLDRMSVSPD--------------------VVTYNTI 210
Query: 251 LNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLID 310
L C G L QA E + R+L+ Y V+ + +IL+ A + +
Sbjct: 211 LRSLCDS----GKLKQAMEV------LDRMLQRDCYPDVI----TYTILIEATCRDSGVG 256
Query: 311 DAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMI 370
AMK+L + R + + Y++L+ G L A+K + M +PN+ ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 371 DTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDI 430
+ G + +AEKL ++ G ++ F +++ + G L A +LE M Q
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGC 375
Query: 431 EPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSR 490
+P++ Y +L + + +D+ +++ G + Y+ ++ + +++
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 491 VFDEMLQHGFTPNIITLNVMLDIYGKA-KLFKRVRKLFSMAKKLGLVDVISYNTIIAAYG 549
+ +++ G +P +IT N ++D KA K K ++ L M K D I+Y++++
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 550 QNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHY 609
+ ++ E + G + +NS++ K Q + + L M C +
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 610 TYNIMIDIYGEQGWINEVVGVLTELKECGL 639
+Y I+I+ +G E + +L EL GL
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 188/428 (43%), Gaps = 9/428 (2%)
Query: 88 SAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMRE 147
+ +I + RL KA +++ ++ VP++ + VM++ Y + G++ A VL M
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198
Query: 148 AGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYRE 207
SP++V YNT++ ++ A + + PD TY +IE R
Sbjct: 199 -SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 208 AKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQ 266
A E++ G P+ L+N K + A+ L+DM + GCQ + I +L+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 267 AYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVF 326
+ GR + ++L L + ++ + +IL+ + GL+ A+ +L +K +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL-EKMPQHGCQ 376
Query: 327 EDNLYH--LLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEK 384
++L + LL CK+ + A++ M P++ TM+ G +A +
Sbjct: 377 PNSLSYNPLLHGFCKEK-KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 385 LYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIY 444
+ L S G LI + V+ KAG A +L+ M + KD++PD Y ++
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGL 494
Query: 445 QQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNI 504
+ G +D+ +++ + GI N ++ ++ ++ D M+ G PN
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 505 ITLNVMLD 512
+ ++++
Sbjct: 555 TSYTILIE 562
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 167/387 (43%), Gaps = 3/387 (0%)
Query: 20 TLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKL 79
TLI + G AK ++ P+V T+ +++ Y K+ + A ++M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS 201
Query: 80 GLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAE 139
V Y+ ++ ++A EV+ + + P++ + +++ A + + A
Sbjct: 202 PDVV--TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 140 LVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGW 199
+L MR+ G +P++V YN L+ G K ++ A + + G +P+ T+ ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 200 GRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSS 259
G + +A+ ++ G+ P+ LIN + A++ L+ M GCQ +S
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 260 I-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGD 318
+ LL + K + D L+ + + ++ + + ++ A K G ++DA+++L
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 319 KRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGM 378
K Y+ +I +G A+K+ M D KP+ +++ S G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 379 FTEAEKLYLNLKSSGIRLDLIAFTVVV 405
EA K + + GIR + + F ++
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 1/231 (0%)
Query: 36 KWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIY 94
K ML P+V TF +L+ + + A +M + G S +Y+ ++ +
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 95 TRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNI 154
+ ++A E + + P++ + ML A + GK+E+A +L + G SP +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 155 VAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKE 214
+ YNT++ G K A +L ++ L+PD TY S++ G R G EA ++ E
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 215 LKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLL 265
+ +G +PNA +++ K + A++ L M+N GC+ + T+L
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 153/363 (42%), Gaps = 5/363 (1%)
Query: 2 IREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYK 61
I E+ GA + +N +I K G + M V P+V T+ ++
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLC 215
Query: 62 KSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLE 120
S +++A ++M + + Y+ +I R S A +++ +R+ P++
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 121 NWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSI 180
+ V++N ++G+L+EA L M +G PN++ +N ++ A++L +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 181 KDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDE 240
G P T+ +I R G A +++ G +PN+ + L++ K +
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 241 EGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSIL 299
+ A+ L+ M++ GC + T+L A K G+ ++ IL + L + + +
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 300 VMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDG 359
+ K G A+K+L + R KD + Y L+ G + A+K +
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 360 KPN 362
+PN
Sbjct: 516 RPN 518
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + N +N L++ K ++ ++ M+ P++ T+ ++ K VE+A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 70 EFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLI---REDKVVPNLENWLVML 126
NQ+ G C T+ L+ K + I+L+ R + P+ + ++
Sbjct: 434 VEILNQLSSKG--CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
S++GK++EA G PN V +N++M G K + A + + + G +
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNAS 225
P+ET+Y +IEG G +EA EL + G +S
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein At5g50280,
chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2
SV=1
Length = 723
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 194/428 (45%), Gaps = 4/428 (0%)
Query: 284 SLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGH 343
SL + L + +CS+L + + D + +L + K+ + LY+ I S
Sbjct: 229 SLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQR 288
Query: 344 LANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFT-EAEKLYLNLKSSGIRLDLIAFT 402
+A ++Y M + P+ +I T G E +++ + G++ F
Sbjct: 289 YDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFG 348
Query: 403 VVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILK 462
+V+ + G LK+ V++T ++K I + +Y ++ Y + ++++ L+ ++
Sbjct: 349 GLVKSFCDEG-LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRD 407
Query: 463 SGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAK-LFK 521
G+ + Y+ +++ AR + D + + EM G PN+ + ++ YG+ K +
Sbjct: 408 KGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Query: 522 RVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSML 580
F KK+GL SY +I AY + E ++ +EM +G S+E Y S+L
Sbjct: 468 MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVL 527
Query: 581 DAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLR 640
DA+ + G + + M TYN ++D + +QG E V++E + GL+
Sbjct: 528 DAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Query: 641 PDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKW 700
P + +YN L+ AY G L+KEM ++PD ITY+ MI A R F A +
Sbjct: 588 PSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFY 647
Query: 701 SLWMKQIG 708
M + G
Sbjct: 648 HKMMVKSG 655
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 143/299 (47%), Gaps = 6/299 (2%)
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSY-LYYKILKSGITWNQELYDC 474
DA V E M+K ++ PD ++ ++ G K + ++ K+ + G+ W+Q+++
Sbjct: 291 DAWEVYEAMDKI-NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGG 349
Query: 475 VINC-CARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKL 533
++ C L + L + EM + G N I N ++D Y K+ + V LF+ +
Sbjct: 350 LVKSFCDEGLKEEALV-IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK 408
Query: 534 GL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENF 592
GL +YN ++ AY + + + + ++EM+ G ++++Y ++ AYG+ +M +
Sbjct: 409 GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468
Query: 593 K-NVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIK 651
+ RMK+ ++Y +I Y GW + E+ + G++P + +Y +++
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 652 AYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
A+ +G + + K M I+ +ITY ++ + ++EA ++GLQ
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 123/265 (46%), Gaps = 9/265 (3%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G + N ++NTL+ A NK +E F M + ++P+ AT+ +LM Y + +
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 70 EFAFNQMRKLGLVCE-SAYSAMITIYTRL-SLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
E +M LGL +Y+ +I+ Y R + + A + +++ + P+ ++ +++
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGY---GKVSNMEAAQRLFLSIKDVG 184
AYS G E+A M + G P++ Y +++ + G + +L L K G
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 185 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAV 244
TY ++++G+ + G Y EA+ E +G +P+ L+N +A+ +
Sbjct: 554 T---RITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLP 610
Query: 245 NTLDDMLNMGCQHSSIL-GTLLQAY 268
L +M + + SI T++ A+
Sbjct: 611 QLLKEMAALNLKPDSITYSTMIYAF 635
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 180/420 (42%), Gaps = 50/420 (11%)
Query: 60 YKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAE--EVIRLIREDKVVP 117
Y +W V EA M K+ + ++ A++ R + E E+ + E V
Sbjct: 289 YDDAWEVYEA------MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKW 342
Query: 118 NLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLF 177
+ + + ++ ++ +G EEA ++ M + G N + YNTLM Y K +++E + LF
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 178 LSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKY 237
++D GL+P TY +++ + R + +E++ LG +PN + LI+ + +
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 238 ED-EEGAVNTLDDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTS 295
+ + A + M +G + SS T L+ AY +G + + + + ++ +
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 296 CSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMH 355
+ ++ A+ + G D+G L K+
Sbjct: 523 YTSVLDAFRRSG--------------------------------DTGKLMEIWKLMLREK 550
Query: 356 ICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLK 415
I + + T++D ++ G++ EA + G++ ++ + +++ Y + G
Sbjct: 551 IKGTRITYN---TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 416 DACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLD-KLSYLYYKIL-KSGITWNQELYD 473
+L+ M +++PD+ Y M IY + D K ++ Y+K++ KSG + Y+
Sbjct: 608 KLPQLLKEMAAL-NLKPDSITYSTM--IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE 664
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 170/400 (42%), Gaps = 9/400 (2%)
Query: 153 NIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKW-Y 211
++ YN ++G + A ++ ++ + + PD T +I +AG + W
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 212 YKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEK 270
++++ G K + L+ +E A+ +M G + ++I+ TL+ AY K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 271 AGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNL 330
+ + V + + + + + +IL+ AY + D +L + +D E N+
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL--REMEDLGLEPNV 449
Query: 331 --YHLLICSCKDSGHLAN-AVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYL 387
Y LI + + +++ A + M KP+ H +I YSV G +A +
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 388 NLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQC 447
+ GI+ + +T V+ + ++G + + M ++K I+ Y +L + +
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK-IKGTRITYNTLLDGFAKQ 568
Query: 448 GMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITL 507
G+ + + + K G+ + Y+ ++N AR +L ++ EM P+ IT
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 508 NVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIA 546
+ M+ + + + FKR M K G V D SY + A
Sbjct: 629 STMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRA 668
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
+G K + + LI+A + G E F M + ++P+V T+ ++ +++S + +
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Query: 69 -AEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
E +R+ Y+ ++ + + LY +A +V+ + + P++ + +++N
Sbjct: 539 LMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMN 598
Query: 128 AYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEP 187
AY++ G+ + +L M P+ + Y+T++ + +V + + A + G P
Sbjct: 599 AYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Query: 188 DETTY---RSMIEGWGRAGNYRE 207
D +Y R+++E + N ++
Sbjct: 659 DPRSYEKLRAILEDKAKTKNRKD 681
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 143/656 (21%), Positives = 265/656 (40%), Gaps = 92/656 (14%)
Query: 62 KSWNVEEAEFAFNQMRKLGLVC---ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPN 118
K+ + E A F +++ +C S + ++ Y+RLSL +KA ++ L + +P
Sbjct: 109 KTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 168
Query: 119 LENWLVMLNAYSQQGK-LEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLF 177
+ ++ +L+A + + + AE V M E+ SPN+ YN L+ G+ N++ A LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 178 LSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKY 237
++ G P+ TY ++I+G+ + + + + G +PN + +IN +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 238 EDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSC 296
+ L +M G + TL++ Y K G N
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG-------------------NFHQA 329
Query: 297 SILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHI 356
++ ++HGL + Y LI S +G++ A++ M +
Sbjct: 330 LVMHAEMLRHGLTPSVIT----------------YTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 357 CDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKD 416
PN T++D +S G EA ++ + +G ++ + ++ + G ++D
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 417 ACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVI 476
A AVLE M K+K + PD Y +L SG
Sbjct: 434 AIAVLEDM-KEKGLSPDVVSYSTVL---------------------SGF----------- 460
Query: 477 NCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV 536
R+ +DE RV EM++ G P+ IT + ++ + + + K L+ ++GL
Sbjct: 461 ---CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 537 -DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNV 595
D +Y +I AY +LE EM G + Y+ +++ K+ + K +
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 596 LRRMKETSCTFDHYTYNIMID-------------IYG--EQGWINEVVGVLTELKECGLR 640
L ++ TY+ +I+ I G +G + E V + +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 641 PDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLE 696
PD +YN +I + AG + A L KEM ++G +T ++ AL + K E
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/560 (22%), Positives = 249/560 (44%), Gaps = 24/560 (4%)
Query: 103 AEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMT 162
AE V + + E +V PN+ + +++ + G ++ A + M G PN+V YNTL+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 163 GYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKP 222
GY K+ ++ +L S+ GLEP+ +Y +I G R G +E + E+ GY
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 223 NASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRIL 281
+ TLI + K + A+ +ML G S I T L+ + KAG + L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 282 KGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNL--YHLLICSCK 339
+ + N + + LV + + G +++A +VL + D F ++ Y+ LI
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL--REMNDNGFSPSVVTYNALINGHC 426
Query: 340 DSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLI 399
+G + +A+ + M P++ T++ + EA ++ + GI+ D I
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 400 AFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYK 459
++ +++ + + K+AC + E M + + PD + Y ++ Y G L+K L+ +
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 460 ILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKL 519
+++ G+ + Y +IN + E R+ ++ P+ +T + +++ +
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE- 604
Query: 520 FKRVRKLF-----------------SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQ 562
FK V L SM K D +YN +I + + ++ + +
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
EM GF + +++ A KEG++ +V+ + + + ++++I +G
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREG 724
Query: 623 WINEVVGVLTELKECGLRPD 642
++ V+ VL E+ + G P+
Sbjct: 725 NMDVVLDVLAEMAKDGFLPN 744
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 227/498 (45%), Gaps = 56/498 (11%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G L+ +NTLI K G ML + P+V T+ L+ K+ N+ A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 70 EFAFNQMRKLGLVC-ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
+QMR GL E Y+ ++ +++ +A V+R + ++ P++ + ++N
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
+ GK+E+A VL M+E G SP++V+Y+T+++G+ + +++ A R+ + + G++PD
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
TY S+I+G+ +EA Y+E+ +G P+ LIN + D E A+ +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 249 DMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGL 308
+M+ G VL ++ + S+L+ K
Sbjct: 545 EMVEKG----------------------------------VLPDVVTYSVLINGLNKQSR 570
Query: 309 IDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCT 368
+A ++L ++++V D YH LI +C + ++ S + +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSN-------IEFKS-------------VVS 610
Query: 369 MIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQK 428
+I + + GM TEA++++ ++ + D A+ +++ + +AG ++ A + + M K
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 429 DIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDEL 488
+ + +++ + G +++L+ + +L+S E ++ R +D +
Sbjct: 671 FLLHTVTVIA-LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVV 729
Query: 489 SRVFDEMLQHGFTPNIIT 506
V EM + GF PN I+
Sbjct: 730 LDVLAEMAKDGFLPNGIS 747
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 146/290 (50%), Gaps = 3/290 (1%)
Query: 422 ETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCAR 481
E +E Q + P+ + Y ++R + G +D L+ K+ G N Y+ +I+ +
Sbjct: 195 EMLESQ--VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 482 ALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVIS 540
ID+ ++ M G PN+I+ NV+++ + K V + + + G +D ++
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 541 YNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMK 600
YNT+I Y + N EM G + S+ Y S++ + K G M L +M+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 601 ETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVE 660
+ TY ++D + ++G++NE VL E+ + G P + +YN LI + + G +E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 661 DAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
DA+ ++++M+E G+ PD ++Y+ +++ R+ EA++ M + G++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 219/481 (45%), Gaps = 12/481 (2%)
Query: 232 NLHAKYEDEEGA---VNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQH 288
++ AK D+E A +L + ++ SS+ ++++Y + D I+ +
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 289 VLFNLTSCSILVMAYVKH----GLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHL 344
+ + S + ++ A ++ ++ K + + + VF Y++LI +G++
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT---YNILIRGFCFAGNI 221
Query: 345 ANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVV 404
A+ ++ M PN+ T+ID Y + + KL ++ G+ +LI++ VV
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 405 VRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSG 464
+ + G +K+ VL M + + D Y +++ Y + G + ++ ++L+ G
Sbjct: 282 INGLCREGRMKEVSFVLTEMNR-RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 465 ITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYG-KAKLFKRV 523
+T + Y +I+ +A ++ D+M G PN T ++D + K + +
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 524 RKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAY 583
R L M V++YN +I + +E + +++M+ G S + +Y+++L +
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 584 GKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDL 643
+ ++ V R M E D TY+ +I + EQ E + E+ GL PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 644 CSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLW 703
+Y LI AY + G +E A+ L EM E G+ PD +TY+ +I L + + EA + L
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 704 M 704
+
Sbjct: 581 L 581
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 164/329 (49%), Gaps = 2/329 (0%)
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDML 441
AE ++ + S + ++ + +++R + AG++ A + + ME K P+ Y ++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME-TKGCLPNVVTYNTLI 247
Query: 442 RIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT 501
Y + +D L + G+ N Y+ VIN R + E+S V EM + G++
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 502 PNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSST 560
+ +T N ++ Y K F + + + + GL VI+Y ++I + + N+
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 561 VQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGE 620
+ +M+ G + Y +++D + ++G M VLR M + + TYN +I+ +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 621 QGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKIT 680
G + + + VL ++KE GL PD+ SY+T++ + + V++A+ + +EM E GI+PD IT
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 681 YTNMITALQRNDKFLEAIKWSLWMKQIGL 709
Y+++I + EA M ++GL
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 197/418 (47%), Gaps = 8/418 (1%)
Query: 295 SCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICS---CKDSGHLANAVKIY 351
SC + ++A K ID +++ +R D+ + +Y L I C+ G + + K+
Sbjct: 191 SCIVFLVAAKKRRRIDLCLEIF--RRMVDSGVKITVYSLTIVVEGLCR-RGEVEKSKKLI 247
Query: 352 SHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKA 411
+ KP + T+I+ Y F+ E + +K G+ + + +T+++ + VK
Sbjct: 248 KEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKN 307
Query: 412 GSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQEL 471
G + DA + + M +++ IE D ++Y ++ + G + + L+ ++ + G++ +
Sbjct: 308 GKMSDAEKLFDEM-RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYT 366
Query: 472 YDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAK 531
Y +I+ + + + +EM G + N ++D Y + + ++ + +
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 532 KLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQME 590
+ G DV + NTI + + + K + + M G +S +Y +++D Y KEG +E
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 591 NFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLI 650
K + M + TYN+MI Y +QG I E + ++ G+ PD +Y +LI
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 651 KAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIG 708
IA V++A+ L EM G++ + +TYT MI+ L + K EA MK+ G
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 196/433 (45%), Gaps = 14/433 (3%)
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKD 323
L A +K R D I + + V + S +I+V + G ++ + K++ + K
Sbjct: 195 FLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG 254
Query: 324 TVFEDNLYHLLI---CSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVM-GMF 379
E Y+ +I +D + +K+ DG + T++ SV G
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK----DGVVYNKVTYTLLMELSVKNGKM 310
Query: 380 TEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCD 439
++AEKL+ ++ GI D+ +T ++ + G++K A + + + +K + P +Y Y
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL-TEKGLSPSSYTYGA 369
Query: 440 MLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHG 499
++ + G + L ++ G+ Q +++ +I+ R +DE S ++D M Q G
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 500 FTPNIITLNVMLDIYGKAKLFKRVRK-LFSMAKKLGLVDVISYNTIIAAYGQNKNLESMS 558
F ++ T N + + + K + ++ LF M + + +SY +I Y + N+E
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 559 STVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIY 618
EM G + YN M+ AY K+G+++ + + M+ D YTY +I +
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI--H 547
Query: 619 GE--QGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEP 676
GE ++E + + +E+ GL + +Y +I AG ++A GL EM+ G
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 677 DKITYTNMITALQ 689
D YT +I ++
Sbjct: 608 DNKVYTALIGSMH 620
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 198/494 (40%), Gaps = 38/494 (7%)
Query: 124 VMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDV 183
++ Y G EE V M + G S + + + K ++ +F + D
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS 218
Query: 184 GLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
G++ + ++EG R G ++K KE G KP A T+IN + K D G
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 244 VNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAY 303
L M G V++N + ++L+
Sbjct: 279 EGVLKVMKKDG----------------------------------VVYNKVTYTLLMELS 304
Query: 304 VKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLIC-SCKDSGHLANAVKIYSHMHICDGKPN 362
VK+G + DA K+ + R + + ++Y LI +C+ G++ A ++ + P+
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR-KGNMKRAFLLFDELTEKGLSPS 363
Query: 363 LHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLE 422
+ +ID +G AE L ++S G+ + + F ++ Y + G + +A + +
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 423 TMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARA 482
ME QK + D + + + + D+ +++++ G+ + Y +I+ +
Sbjct: 424 VME-QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 483 LPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISY 541
++E R+F EM G PN IT NVM+ Y K K RKL + + G+ D +Y
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 542 NTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKE 601
++I N++ EM G + Y M+ K G+ + + MK
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 602 TSCTFDHYTYNIMI 615
T D+ Y +I
Sbjct: 603 KGYTIDNKVYTALI 616
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 184/409 (44%), Gaps = 2/409 (0%)
Query: 21 LIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLG 80
+ A KR ++L + F M++ V+ V + +++ + VE+++ + G
Sbjct: 195 FLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG 254
Query: 81 LVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAE 139
+ E+ Y+ +I Y + + E V++++++D VV N + +++ + GK+ +AE
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE 314
Query: 140 LVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGW 199
+ MRE G ++ Y +L++ + NM+ A LF + + GL P TY ++I+G
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 200 GRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSS 259
+ G A+ E++ G TLI+ + + + A D M G Q
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434
Query: 260 IL-GTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGD 318
T+ + + R D + L + V + S + L+ Y K G +++A ++ +
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 319 KRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGM 378
K Y+++I + G + A K+ ++M P+ + ++I +
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 379 FTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQ 427
EA +L+ + G+ + + +TV++ KAG +A + + M+++
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 171/398 (42%), Gaps = 2/398 (0%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G K+ ++ +RG VE K ++P T+ ++ Y K +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNA 128
E M+K G+V Y+ ++ + + AE++ +RE + ++ + +++
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 129 YSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPD 188
++G ++ A L+ + E G SP+ Y L+ G KV M AA+ L ++ G+
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 189 ETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLD 248
+ + ++I+G+ R G EA Y ++ G++ + T+ + + + + A L
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 249 DMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHG 307
M+ G + S++ T L+ Y K G + R+ + V N + ++++ AY K G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 308 LIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMC 367
I +A K+ + + Y LI + ++ A++++S M + N
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 368 TMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVV 405
MI S G EA LY +K G +D +T ++
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 148/327 (45%), Gaps = 2/327 (0%)
Query: 384 KLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRI 443
+++ + SG+++ + + T+VV + G ++ + +++ K I+P+AY Y ++
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFS-VKGIKPEAYTYNTIINA 268
Query: 444 YQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPN 503
Y + + + + K G+ +N+ Y ++ + + + ++FDEM + G +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 504 IITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTIIAAYGQNKNLESMSSTVQ 562
+ ++ + KR LF + GL +Y +I + + + +
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 563 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 622
EMQ G +++ +N+++D Y ++G ++ + M++ D +T N + +
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 623 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYT 682
+E L + E G++ SY LI Y G VE+A L EM G++P+ ITY
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Query: 683 NMITALQRNDKFLEAIKWSLWMKQIGL 709
MI A + K EA K M+ G+
Sbjct: 509 VMIYAYCKQGKIKEARKLRANMEANGM 535
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 8 SLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVE 67
S G + +FNTLI ++G V+ + + +M + Q +V T + + + +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 68 EAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
EA+ +M + G+ + +Y+ +I +Y + E+A+ + + V PN + VM+
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLE 186
AY +QGK++EA + +M G P+ Y +L+ G N++ A RLF + GL+
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 187 PDETTYRSMIEGWGRAGNYREAKWYYKELKHLGY 220
+ TY MI G +AG EA Y E+K GY
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 5/274 (1%)
Query: 440 MLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCA--RALPIDELSRVFDEMLQ 497
+ R+Y GM ++ ++ ++K G++ ++ C++ A + ID +F M+
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDER--SCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 498 HGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLES 556
G + +L ++++ + ++ +KL G+ + +YNTII AY + ++
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 557 MSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 616
+ ++ M+ DG + Y +++ K G+M + + + M+E D + Y +I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 617 IYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEP 676
+G + + EL E GL P +Y LI G + A L+ EM+ G+
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 677 DKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
++ + +I R EA M+Q G Q
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 508 NVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLESMSSTVQEMQF 566
+++ +Y +F+ ++F K GL +D S + A + + ++ + M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 567 DGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINE 626
G +++ + +++ + G++E K +++ + YTYN +I+ Y +Q +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 627 VVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMIT 686
V GVL +K+ G+ + +Y L++ G + DA L EMRE GIE D YT++I+
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
>sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protein At3g23020
OS=Arabidopsis thaliana GN=At3g23020 PE=2 SV=1
Length = 842
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 142/652 (21%), Positives = 280/652 (42%), Gaps = 62/652 (9%)
Query: 41 MLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCESAYSAMI-TIYTRLSL 99
M+ ++P +T+G L+ +Y K A +M K+G+ + + ++ +Y +
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 100 YEKAEEVIRLIREDK------VVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPN 153
++KAEE + D+ V + + M++ Y + G+++EA M E G P
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 154 IVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYK 213
V +NT++ YG + L ++K + PD TY +I + + A Y+K
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFK 391
Query: 214 ELKHLGYKPNASNLYTLI---NLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEK 270
E+K G KP+ + TL+ ++ E+ EG + +DD N+ + L + Y +
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD-NVEIDEYT-QSALTRMYVE 449
Query: 271 AGRTDNVPRILKGSLYQHVLFNLTS--CSILVMAYVKHGLIDDAMKVL--GDKRWKDTVF 326
A + K HV N++S S + AY + G + +A +V + K TV
Sbjct: 450 AEMLEKSWSWFKRF---HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVI 506
Query: 327 EDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLY 386
E Y+++I + S A +++ M P+ T++ + M +
Sbjct: 507 E---YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 387 LNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQ 446
++ +G D I + V+ +VK G L A V + M + +IEPD +Y ++ +
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM-VEYNIEPDVVVYGVLINAFAD 622
Query: 447 CGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHGFT---PN 503
G + + + ++GI N +Y+ +I + +DE ++ ++LQ P+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 504 IITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQE 563
+ T N M+++Y + + ++ +F K+ G
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG----------------------------- 713
Query: 564 MQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGW 623
+ + F+ ++ ML Y K G+ E + ++M+E D +YN ++ ++ G
Sbjct: 714 -EANEFTFAM-----MLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGR 767
Query: 624 INEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIE 675
E V E+ G++PD ++ +L GM + AV ++E+R+ I+
Sbjct: 768 FKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/595 (22%), Positives = 263/595 (44%), Gaps = 30/595 (5%)
Query: 1 MIREVRMSLGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLY 60
MIR+ G K + TLI +K G W M + +QP+ T G+++ +Y
Sbjct: 213 MIRK-----GIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMY 267
Query: 61 KKSWNVEEAEFAF-----NQMRKLGLVCESAYS--AMITIYTRLSLYEKAEEVIRLIRED 113
KK+ ++AE F ++ + VC S+Y+ MI Y + ++A E + + E+
Sbjct: 268 KKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEE 327
Query: 114 KVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAA 173
+VP + M++ Y G+L E ++ +M+ +P+ YN L++ + K +++E A
Sbjct: 328 GIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERA 386
Query: 174 QRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINL 233
F +KD GL+PD +YR+++ + EA+ E+ + + L +
Sbjct: 387 GAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRM 446
Query: 234 HAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHV-LFN 292
+ + E E + + G S + AY + G R+ Q V
Sbjct: 447 YVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVF--ICCQEVNKRT 504
Query: 293 LTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLL--ICSCKDSGHLANAV-- 348
+ ++++ AY + A ++ + Y+ L I + D H
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 349 KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
K+ ++ D P C +I ++ +G AE++Y + I D++ + V++ +
Sbjct: 565 KMRETGYVSDCIP----YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 409 VKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKS-GITW 467
G+++ A + +E M K+ I ++ +Y ++++Y + G LD+ +Y K+L+S T
Sbjct: 621 ADTGNVQQAMSYVEAM-KEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ 679
Query: 468 NQELY--DCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRK 525
++Y +C+IN + + + +FD M Q G N T +ML +Y K F+ +
Sbjct: 680 YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQ 738
Query: 526 LFSMAKKLG-LVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSM 579
+ +++ L D +SYN+++ + + + T +EM G + S+
Sbjct: 739 IAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 116/619 (18%), Positives = 249/619 (40%), Gaps = 81/619 (13%)
Query: 153 NIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYY 212
N++ YN ++ GK Q L+ + G++P +TY ++I+ + + G A +
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 213 KELKHLGYKPNASNLYTLINLHAKYEDEEGAV----------NTLDDMLNMGCQHSSILG 262
++ +G +P+ ++ ++ K + + A N D + C S
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHV---CLSSYTYN 302
Query: 263 TLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWK 322
T++ Y K+G+ K L + ++ + + ++ Y +G + + ++ +
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH 362
Query: 323 DTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEA 382
+ Y++LI + + A + M KP+ T++ +S+ M EA
Sbjct: 363 -CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 383 EKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAY------- 435
E L + + +D + + RMYV+A L+ + + + ++ + Y
Sbjct: 422 EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAY 481
Query: 436 ----LYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRV 491
+ R++ C ++K + + Y ++ + C +A +
Sbjct: 482 GERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYG--------ISKSCEKAC------EL 527
Query: 492 FDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV--------------- 536
F+ M+ +G TP+ T N ++ I A + + R ++ G V
Sbjct: 528 FESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Query: 537 ---------------------DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEA 575
DV+ Y +I A+ N++ S V+ M+ G +
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 576 YNSMLDAYGKEGQMENFKNVLRRMKETSCT----FDHYTYNIMIDIYGEQGWINEVVGVL 631
YNS++ Y K G ++ + + R++ + SC D YT N MI++Y E+ + + +
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQ-SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
+K+ G + ++ ++ Y G E+A + K+MRE I D ++Y +++ +
Sbjct: 707 DSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALD 765
Query: 692 DKFLEAIKWSLWMKQIGLQ 710
+F EA++ M G+Q
Sbjct: 766 GRFKEAVETFKEMVSSGIQ 784
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/531 (20%), Positives = 232/531 (43%), Gaps = 31/531 (5%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMR 77
+NT+I K G ++ ++ F MLE + P TF ++ +Y + + E M+
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 78 KLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEE 137
Y+ +I+++T+ + E+A + +++D + P+ ++ +L A+S + +EE
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 138 AELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIE 197
AE ++ M + + + L Y + +E + F G E Y + I+
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANID 479
Query: 198 GWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMG--- 254
+G G EA+ + + + K +I + + E A + M++ G
Sbjct: 480 AYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 255 --CQHSSILGTLLQAYEKAGRTDNVPRILKGSLY-------QHVLFNLTSCSILVMAYVK 305
C +++++ L A ++P KG Y +V + C++ + ++VK
Sbjct: 539 DKCTYNTLVQILASA--------DMPH--KGRCYLEKMRETGYVSDCIPYCAV-ISSFVK 587
Query: 306 HGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHI 365
G ++ A +V + + + +Y +LI + D+G++ A+ M N I
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 366 MCTMIDTYSVMGMFTEAEKLYLNLKSSGIRL---DLIAFTVVVRMYVKAGSLKDACAVLE 422
++I Y+ +G EAE +Y L S + D+ ++ +Y + ++ A A+ +
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFD 707
Query: 423 TMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARA 482
+M+++ E + + + ML +Y++ G ++ + + ++ + I + Y+ V+ A
Sbjct: 708 SMKQRG--EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALD 765
Query: 483 LPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKR-VRKLFSMAKK 532
E F EM+ G P+ T + I K + K+ VRK+ + KK
Sbjct: 766 GRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKK 816
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLE-CDVQ--PNVATFGMLMGLYKKSWNV 66
G N ++N+LI K G ++ + +L+ C+ P+V T ++ LY + V
Sbjct: 640 GIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMV 699
Query: 67 EEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVML 126
+AE F+ M++ G E ++ M+ +Y + +E+A ++ + +RE K++ + ++ +L
Sbjct: 700 RKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 127 NAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIK 181
++ G+ +EA M +G P+ + +L T K+ + A R I+
Sbjct: 760 GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIR 814
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 184/407 (45%), Gaps = 41/407 (10%)
Query: 305 KHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLH 364
K L+ + ++ L + W + F + + +LI + G+ A ++ S + PN+
Sbjct: 118 KWNLVSEILEWLRYQNWWN--FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVI 175
Query: 365 IMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETM 424
++++Y G AE ++ ++SSG I + ++++ +V+ K+A V ET+
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 425 --EKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARA 482
EK+ ++PD +Y M+ +Y++ G +K ++ ++ G+ + Y+ +++
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---E 292
Query: 483 LPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYN 542
E+S+++D+M + P DV+SY
Sbjct: 293 TSYKEVSKIYDQMQRSDIQP----------------------------------DVVSYA 318
Query: 543 TIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKET 602
+I AYG+ + E S +EM G + +AYN +LDA+ G +E K V + M+
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 603 SCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDA 662
D ++Y M+ Y + +K G P++ +Y TLIK Y A VE
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 663 VGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 709
+ + ++MR +GI+ ++ T ++ A R F A+ W M+ G+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 485
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 114/210 (54%), Gaps = 1/210 (0%)
Query: 35 AKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGL-VCESAYSAMITI 93
+K + M D+QP+V ++ +L+ Y ++ EEA F +M G+ AY+ ++
Sbjct: 299 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 358
Query: 94 YTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPN 153
+ + E+A+ V + +R D++ P+L ++ ML+AY +E AE ++ GF PN
Sbjct: 359 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 418
Query: 154 IVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYK 213
IV Y TL+ GY K +++E ++ ++ G++ ++T ++++ GR N+ A +YK
Sbjct: 419 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYK 478
Query: 214 ELKHLGYKPNASNLYTLINLHAKYEDEEGA 243
E++ G P+ L++L + ++ E A
Sbjct: 479 EMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 178/396 (44%), Gaps = 41/396 (10%)
Query: 121 NWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSI 180
++L+++ AY + G AE VL + + G +PN+++Y LM YG+ A+ +F +
Sbjct: 141 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 200
Query: 181 KDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKEL---KHLGYKPNASNLYTLINLHAKY 237
+ G EP TY+ +++ + ++EA+ ++ L K KP+ + +I ++ K
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 238 EDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCS 297
+ E A M+ G S++ L ++E + + V +I + ++ S +
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQRSDIQPDVVSYA 318
Query: 298 ILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHIC 357
+L+ AY + ++A+ +VFE+ L D+G
Sbjct: 319 LLIKAYGRARREEEAL----------SVFEEML---------DAGV-------------- 345
Query: 358 DGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDA 417
+P ++D +++ GM +A+ ++ +++ I DL ++T ++ YV A ++ A
Sbjct: 346 --RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 418 CAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVIN 477
+ + K EP+ Y +++ Y + ++K+ +Y K+ SGI NQ + +++
Sbjct: 404 EKFFKRI-KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 478 CCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDI 513
R + EM G P+ NV+L +
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 164/396 (41%), Gaps = 56/396 (14%)
Query: 60 YKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNL 119
Y+ WN E +F +IT Y +L + AE V+ ++ + PN+
Sbjct: 131 YQNWWNFSEIDFLM----------------LITAYGKLGNFNGAERVLSVLSKMGSTPNV 174
Query: 120 ENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLF-- 177
++ ++ +Y + GK AE + M+ +G P+ + Y ++ + + + A+ +F
Sbjct: 175 ISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFET 234
Query: 178 -LSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWY------------------------- 211
L K L+PD+ Y MI + +AGNY +A+
Sbjct: 235 LLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS 294
Query: 212 -------YKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHS-SILGT 263
Y +++ +P+ + LI + + EE A++ ++ML+ G + +
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 264 LLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKD 323
LL A+ +G + + K + +L S + ++ AYV ++ A K KR K
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF--KRIKV 412
Query: 324 TVFEDNL--YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTE 381
FE N+ Y LI + + +++Y M + K N I+ T++D F
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 472
Query: 382 AEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDA 417
A Y ++S G+ D A V++ + L++A
Sbjct: 473 ALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 121/226 (53%), Gaps = 4/226 (1%)
Query: 12 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEF 71
K + ++++ +IY K G E K F M+ V + T+ LM ++ S+ +E
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSY--KEVSK 300
Query: 72 AFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYS 130
++QM++ + + +Y+ +I Y R E+A V + + V P + + ++L+A++
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 131 QQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDET 190
G +E+A+ V SMR P++ +Y T+++ Y S+ME A++ F IK G EP+
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 191 TYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAK 236
TY ++I+G+ +A + + Y++++ G K N + L T+++ +
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 466
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 172/383 (44%), Gaps = 15/383 (3%)
Query: 230 LINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGT-LLQAYEKAGRTDNVPRILKGSLYQH 288
LI + K + GA L + MG + I T L+++Y + G+ +N I +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 289 VLFNLTSCSILVMAYVKHGLIDDAMKV---LGDKRWKDTVFEDNLYHLLICSCKDSGHLA 345
+ + I++ +V+ +A +V L D++ + +YH++I K +G+
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 346 NAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVV 405
A K++S M + G P + + ++ + E K+Y ++ S I+ D++++ +++
Sbjct: 265 KARKVFSSM-VGKGVPQSTVTYNSLMSFETS--YKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 406 RMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGI 465
+ Y +A ++A +V E M + P Y +L + GM+++ ++ + + I
Sbjct: 322 KAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 466 TWNQELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRK 525
+ Y +++ A ++ + F + GF PNI+T ++ Y KA V K
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN---DVEK 437
Query: 526 LFSMAKKLGLVDVISYNTIIA----AYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLD 581
+ + +K+ L + + TI+ A G+ KN S +EM+ G +A N +L
Sbjct: 438 MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 497
Query: 582 AYGKEGQMENFKNVLRRMKETSC 604
+ ++E K + ET+
Sbjct: 498 LASTQDELEEAKELTGIRNETAT 520
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 123/236 (52%), Gaps = 8/236 (3%)
Query: 43 ECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYE 101
+ ++P+ + M++ +YKK+ N E+A F+ M G+ + Y+++++ T Y+
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS---YK 296
Query: 102 KAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLM 161
+ ++ ++ + P++ ++ +++ AY + + EEA V M +AG P AYN L+
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 162 TGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYK 221
+ +E A+ +F S++ + PD +Y +M+ + A + A+ ++K +K G++
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 222 PNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQ-HSSILGTLLQAYEKAGRTDN 276
PN TLI +AK D E + + M G + + +IL T++ A +GR N
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA---SGRCKN 469
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/565 (21%), Positives = 241/565 (42%), Gaps = 57/565 (10%)
Query: 150 FSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAK 209
+ PN++ YN ++ G+ + + ++ + G+ P TY +++ +G+AG +EA
Sbjct: 141 YVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEAL 200
Query: 210 WYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYE 269
+ +KH+G + +H + DE + T+++ ++
Sbjct: 201 LW---IKHMGQR-----------MH--FPDE------------------VTMATVVRVFK 226
Query: 270 KAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDN 329
+G D R KG V +L S IDD K + + V
Sbjct: 227 NSGEFDRADRFFKGWCAGKVDLDLDS-------------IDDFPK---NGSAQSPVNLKQ 270
Query: 330 LYHLLICSCKDSGHLANAVKIYSHMHICDGKPNL-HIMCTMIDTYSVMGMFTEAEKLYLN 388
+ + + ++ S KP L T+ID Y G +A L+
Sbjct: 271 FLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSE 330
Query: 389 LKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCG 448
+ SG+ +D + F ++ G L +A ++L+ ME +K I PD Y +L ++ G
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME-EKGISPDTKTYNILLSLHADAG 389
Query: 449 MLDKLSYLYYKILKSGITWNQELYDCVINC-CARALPIDELSRVFDEMLQHGFTPNIITL 507
++ Y KI K G+ + + V++ C R + + E+ V EM ++ + ++
Sbjct: 390 DIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM-VAEVEAVIAEMDRNSIRIDEHSV 448
Query: 508 NVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTV--QEMQ 565
V++ +Y L + + LF + ++ + +I Y + K L + TV +
Sbjct: 449 PVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAE-KGLWVEAETVFYGKRN 507
Query: 566 FDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWIN 625
G + YN M+ AYGK E ++ + MK D TYN + + ++
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 626 EVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
E +L E+ + G +P +Y +I +Y G++ DAV L + M + G++P+++ Y ++I
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 686 TALQRNDKFLEAIKWSLWMKQIGLQ 710
+ EAI++ M++ G+Q
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQ 652
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 155/760 (20%), Positives = 306/760 (40%), Gaps = 94/760 (12%)
Query: 18 FNTLIYACNKRG-CVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQM 76
+N ++ A + G EL W M V P T+GML+ +Y K+ V+EA M
Sbjct: 148 YNIVLRALGRAGKWDELRLCWIEMA-HNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHM 206
Query: 77 -RKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKV---------VP--------- 117
+++ E + ++ ++ +++A+ + KV P
Sbjct: 207 GQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPV 266
Query: 118 NLENWLVM-LNAYSQQGKLEEAELVLVSMREAGFSPNIVA-YNTLMTGYGKVSNMEAAQR 175
NL+ +L M L + +E++ + P + + +NTL+ YGK + A
Sbjct: 267 NLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAAN 326
Query: 176 LFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHA 235
LF + G+ D T+ +MI G G+ EA+ K+++ G P+ L++LHA
Sbjct: 327 LFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA 386
Query: 236 KYEDEEGAVNTLDDMLNMG-----CQHSSILGTLLQAYEKAG-------------RTD-- 275
D E A+ + +G H ++L L Q A R D
Sbjct: 387 DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEH 446
Query: 276 NVPRILK-----------GSLYQHV----LFNLTSCSILVMAYVKHGLIDDAMKVLGDKR 320
+VP I++ +L++ + + T+ + ++ Y + GL +A V KR
Sbjct: 447 SVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKR 506
Query: 321 WKDTVFEDNL-YHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMF 379
D L Y+++I + + A+ ++ M P+ ++ + + +
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV 566
Query: 380 TEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCD 439
EA+++ + SG + + ++ YV+ G L DA + E MEK ++P+ +Y
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT-GVKPNEVVYGS 625
Query: 440 MLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQHG 499
++ + + GM+++ + + + G+ N + +I ++ ++E RV+D+M
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 500 FTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSS 559
P++ N ML + + +F+ ++ G DVIS+ T++ Y L+
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIE 745
Query: 560 TVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRM-KETSCTFDHYTYNIMIDIY 618
+EM+ G ++N ++ Y +GQ+ + M E D T+ + +
Sbjct: 746 VAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLL 805
Query: 619 GEQGWINEVVGVL---------------------------------TELKECGLRPDLCS 645
+ G +E V L EL + + +
Sbjct: 806 KKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFA 865
Query: 646 YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
YN +I Y +G ++ A+ M+E G+EPD +T ++
Sbjct: 866 YNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 139/707 (19%), Positives = 283/707 (40%), Gaps = 87/707 (12%)
Query: 16 QLFNTLIYACNKRGCVELGAKWFHMMLECDVQPN----VATFGMLMGLYKKSWNVEEAEF 71
Q + ++ R +E K H D P +TF L+ LY K+ + +A
Sbjct: 270 QFLSMELFKVGARNPIE---KSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAAN 326
Query: 72 AFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQ 131
F++M K G+ ++ +T T M++
Sbjct: 327 LFSEMLKSGVPIDT-----VTFNT-----------------------------MIHTCGT 352
Query: 132 QGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETT 191
G L EAE +L M E G SP+ YN L++ + ++EAA + I+ VGL PD T
Sbjct: 353 HGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Query: 192 YRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAV---NTLD 248
+R+++ + E + E+ + + ++ ++ ++ EG V L
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVN----EGLVVQAKALF 468
Query: 249 DMLNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFN-LTSCSILVMAYVKH 306
+ + C SS L ++ Y + G + G N + ++++ AY K
Sbjct: 469 ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKA 528
Query: 307 GLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIM 366
L + A+ + + + T ++ Y+ L + A +I + M KP
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY 588
Query: 367 CTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK 426
MI +Y +G+ ++A LY ++ +G++ + + + ++ + ++G +++A ME+
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 427 QKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPID 486
++ + + +++ Y + G L++ +Y K+ S + + +++ CA +
Sbjct: 649 H-GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 487 ELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV-DVISYNTII 545
E +F+ + + G T ++I+ M+ +Y + ++ ++ GL+ D S+N ++
Sbjct: 708 EAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 546 AAYGQNKNLESMSSTVQEMQFD------------------GFSVSLEAYNSMLDAYGKEG 587
A Y + L EM + V EA + + AY +
Sbjct: 767 ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAK 826
Query: 588 QMEN-------------FKNVLRRMKETSC---TFDHYTYNIMIDIYGEQGWINEVVGVL 631
+ + L +E + +H+ YN +I Y G I+ +
Sbjct: 827 PLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAY 886
Query: 632 TELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDK 678
++E GL PD+ + L+ YG AGMVE + + +EP +
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQ 933
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 254/629 (40%), Gaps = 93/629 (14%)
Query: 10 GAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEA 69
G ++ FNT+I+ C G + M E + P+ T+ +L+ L+ + ++E A
Sbjct: 335 GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 70 EFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKV------VPNLENW 122
+ ++RK+GL ++ + A++ I + + + E VI + + + VP +
Sbjct: 395 LEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQM 454
Query: 123 LV----------------------------MLNAYSQQGKLEEAELVLVSMRE-AGFSPN 153
V +++ Y+++G EAE V R +G +
Sbjct: 455 YVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 154 IVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYK 213
++ YN ++ YGK E A LF +K+ G PDE TY S+ + EA+
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 214 ELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDMLNMGCQHSSIL-GTLLQAYEKAG 272
E+ G KP +I + + AV+ + M G + + ++ G+L+ + ++G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 273 RTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDDAMKVLGDKRWKDTVFEDNLYH 332
+ + + V N + L+ AY K G +++A +V + + + +
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 333 LLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSS 392
++ C D G ++ A I++ + G ++ TM+ Y MGM EA ++ ++ S
Sbjct: 695 SMLSLCADLGIVSEAESIFNALRE-KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 393 GIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGM--- 449
G+ D +F V+ Y G L + C + M ++ + D + + + ++ G+
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSE 813
Query: 450 -LDKLSYLYYK---ILKSGITWN---------------QEL-----------YDCVINCC 479
+ +L Y + + IT QEL Y+ VI
Sbjct: 814 AVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTY 873
Query: 480 ARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKA---------------------- 517
+ + ID + + M + G P+I+T ++ IYGKA
Sbjct: 874 SASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQ 933
Query: 518 KLFKRVRKLFSMAKKLGLVDVISYNTIIA 546
LFK VR + A + L DV+ IA
Sbjct: 934 SLFKAVRDAYVSANRQDLADVVKKEMSIA 962
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 147/325 (45%), Gaps = 40/325 (12%)
Query: 419 AVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLS--------YLYYKILKSGITWNQE 470
++L +++ DIE C L +Q +L + + + +++ +S + N
Sbjct: 88 SILRSLDSSTDIETTLASLCLNLSPKEQTVLLKEQTRWERVLRVFRFFQSHQSYVP-NVI 146
Query: 471 LYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRK-LFSM 529
Y+ V+ RA DEL + EM +G P T +++D+YGKA L K + M
Sbjct: 147 HYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHM 206
Query: 530 AKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQ- 588
+++ D ++ T++ + + + + + L++ +D + K G
Sbjct: 207 GQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----IDDFPKNGSA 262
Query: 589 -----------MENFKNVLRRMKETSCTFDH------------YTYNIMIDIYGEQGWIN 625
ME FK R E S F T+N +ID+YG+ G +N
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 626 EVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 685
+ + +E+ + G+ D ++NT+I G G + +A L+K+M E GI PD TY N++
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY-NIL 381
Query: 686 TALQRNDKFLE-AIKWSLWMKQIGL 709
+L + +E A+++ ++++GL
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGL 406
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 229/523 (43%), Gaps = 40/523 (7%)
Query: 192 YRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDML 251
Y MI R +A+ + E++ KP+A LIN H + A+N +DDML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 252 NMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDD 311
S S Y + L+ A G +
Sbjct: 206 RAAIAPSR------------------------STYNN----------LINACGSSGNWRE 231
Query: 312 AMKVLGDKRWKDTVFEDNLYHLLICSCKDSG-HLANAVKIYSHMHICDGKPNLHIMCTMI 370
A++V K + V D + H ++ S SG + A+ + M +P+ +I
Sbjct: 232 ALEVC-KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 371 DTYSVMGMFTEAEKLYLNL--KSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQK 428
S +G ++A L+ ++ K + R D++ FT ++ +Y G +++ AV E M +
Sbjct: 291 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE- 349
Query: 429 DIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDEL 488
++P+ Y ++ Y GM + I ++GI + Y C++N R+ +
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 489 SRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAA 547
VF M + PN++T N ++D YG ++F ++ G+ +V+S T++AA
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 548 YGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFD 607
++K ++ + + Q G +++ AYNS + +Y ++E + + M++ D
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 608 HYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVK 667
T+ I+I E + L E+++ + Y++++ AY G V +A +
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 668 EMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGLQ 710
+M+ G EPD I YT+M+ A ++K+ +A + L M+ G++
Sbjct: 590 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 144/694 (20%), Positives = 306/694 (44%), Gaps = 35/694 (5%)
Query: 18 FNTLIYACNKRGCVELGAKWFHMMLECDVQPNVAT----FGMLMGLYKKSWNVEEAEFAF 73
F LI ++RGC+EL F M +Q N + M++ L+ + V++A F
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWM---KIQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 74 NQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQ 132
+M+K ++ Y A+I + R + A ++ + + P+ + ++NA
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 133 GKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTY 192
G EA V M + G P++V +N +++ Y A F +K + PD TT+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 193 RSMIEGWGRAGNYREAKWYYKEL--KHLGYKPNASNLYTLINLHAKYEDEEGAVNTLDDM 250
+I + G +A + + K +P+ ++++L++ + E + M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 251 LNMGCQHSSI-LGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKH--- 306
+ G + + + L+ AY G + +L ++ ++ S + L+ +Y +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 307 GLIDDAMKVLGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIM 366
G + ++ +R K V Y+ LI + +G LA AV+I+ M KPN+ +
Sbjct: 407 GKAKEVFLMMRKERRKPNVV---TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 367 CTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEK 426
CT++ S + + +S GI L+ A+ + Y+ A L+ A A+ ++M K
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 427 QKDIEPDAYLYCDMLRIYQQCGM---LDKLSYLYYKILKSGITWNQELYDCVINCCARAL 483
+K ++ D+ + + I C M + +SYL ++ I +E+Y V+ ++
Sbjct: 524 KK-VKADSVTFT--ILISGSCRMSKYPEAISYL-KEMEDLSIPLTKEVYSSVLCAYSKQG 579
Query: 484 PIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYN 542
+ E +F++M G P++I ML Y ++ + + +LF + G+ D I+ +
Sbjct: 580 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACS 639
Query: 543 TIIAAY---GQNKNLESMSSTV--QEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLR 597
++ A+ GQ N+ + + +E+ F G + + A + + ++++
Sbjct: 640 ALMRAFNKGGQPSNVFVLMDLMREKEIPFTG-----AVFFEIFSACNTLQEWKRAIDLIQ 694
Query: 598 RMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAG 657
M + N M+ ++G+ G + ++ + ++ G+ +L +Y L++ G
Sbjct: 695 MMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVG 754
Query: 658 MVEDAVGLVKEMRENGIEPDKITYTNMITALQRN 691
+ +++ M GI+P Y ++I+ +R+
Sbjct: 755 NWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERS 788
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/591 (21%), Positives = 253/591 (42%), Gaps = 20/591 (3%)
Query: 120 ENWLVMLNAYSQQGKLEEAELVLVSMR-EAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFL 178
+N+ V++ S++G +E V M+ + + YN ++ + + + ++ A+ LF
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFF 167
Query: 179 SIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYE 238
++ +PD TY ++I GRAG +R A ++ P+ S LIN
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 239 DEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVP----RILKGSLYQHVLFNLT 294
+ A+ M + G + ++ + K+GR + ++KG+ V + T
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA---KVRPDTT 284
Query: 295 SCSILVMAYVKHGLIDDAMKVLGDKRWK------DTVFEDNLYHLLICSCKDSGHLANAV 348
+ +I++ K G A+ + R K D V ++ HL S K G + N
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY--SVK--GEIENCR 340
Query: 349 KIYSHMHICDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMY 408
++ M KPN+ ++ Y+V GM A + ++K +GI D++++T ++ Y
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 409 VKAGSLKDACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWN 468
++ A V M K++ +P+ Y ++ Y G L + ++ ++ + GI N
Sbjct: 401 GRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 469 QELYDCVINCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLF- 527
++ C+R+ + V G N N + Y A ++ L+
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 528 SMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEG 587
SM KK D +++ +I+ + S ++EM+ ++ E Y+S+L AY K+G
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Query: 588 QMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYN 647
Q+ +++ +MK C D Y M+ Y + + E++ G+ PD + +
Sbjct: 580 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACS 639
Query: 648 TLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAI 698
L++A+ G + L+ MRE I + + +A ++ AI
Sbjct: 640 ALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 9 LGAKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEE 68
L L +++++++ A +K+G V F+ M +P+V + ++ Y S +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 69 AEFAFNQMRKLGLVCES-AYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLN 127
A F +M G+ +S A SA++ + + ++ L+RE K +P V
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE-KEIPF--TGAVFFE 675
Query: 128 AYSQQGKLEE--AELVLVSMREAGF-SPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 184
+S L+E + L+ M + S +I N ++ +GK +EA +LF I G
Sbjct: 676 IFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASG 735
Query: 185 LEPDETTYRSMIEGWGRAGNYRE 207
+ + TY ++E GN+R+
Sbjct: 736 VGINLKTYAILLEHLLAVGNWRK 758
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,604,065
Number of Sequences: 539616
Number of extensions: 11000789
Number of successful extensions: 42383
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 27461
Number of HSP's gapped (non-prelim): 4609
length of query: 711
length of database: 191,569,459
effective HSP length: 125
effective length of query: 586
effective length of database: 124,117,459
effective search space: 72732830974
effective search space used: 72732830974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)