BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005167
(710 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q61823|PDCD4_MOUSE Programmed cell death protein 4 OS=Mus musculus GN=Pdcd4 PE=1 SV=1
Length = 469
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 158/313 (50%), Gaps = 14/313 (4%)
Query: 89 DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIEEYFSTGDVEVAASDL 146
DVE +D DPNYD +E V T+ PLD+ ++K + II+EYF GD A L
Sbjct: 132 DVE-EVDVKDPNYDDDQE--NCVYETVVLPLDETAFEKTLTPIIQEYFEHGDTNEVAEML 188
Query: 147 RELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGFVILLESAD 206
R+L E VS+A++ +EM S LLS L V+S + + F LL+
Sbjct: 189 RDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTNDVEKSFDKLLKDLP 248
Query: 207 DLAVDILDAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKS--YLSA 264
+LA+D A ++ F+ARAV D IL ++ K T+ Q +K+ LS
Sbjct: 249 ELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV----QARAALDKATVLLSM 304
Query: 265 PHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVV 323
+ + WG G V + K+I LL+EY+ SGD EA C++EL V FHHE+V
Sbjct: 305 SKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELV 364
Query: 324 KRALVLAMEI--RTAEPLILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARN 381
A+V+ +E +A +IL LLK + I+ QM +G+ R+ + D+ LD+P + +
Sbjct: 365 YEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYS 424
Query: 382 LFQSIVPVAISEG 394
+ + V G
Sbjct: 425 VLERFVEECFQAG 437
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 8/276 (2%)
Query: 420 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 479
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 480 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 539
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++ S
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID--S 281
Query: 540 SKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGWA-VEDAKDKIMKLLEEYESG 597
K +C + A L++ G+R WG G G V +I LL+EY
Sbjct: 282 YKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLS 341
Query: 598 GVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQM 653
G +SEA C+++L +P F+HE+V +A+VM +E + +LDLL+ + IT +QM
Sbjct: 342 GDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQM 401
Query: 654 TKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 689
+G+ RI + + D+ LD+P++ +VE + G
Sbjct: 402 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 287 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAE-PLILKLLK 345
+K + +++EY E GD E +R+L + V A+ LA+E + + + KLL
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 346 EAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWL--------- 396
+ ++S++ + K F +L + L +LALD P A L + A+ +G L
Sbjct: 225 DLCGT-VMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYK 283
Query: 397 -------------DASFMKSLGEDGRVQQE-------DEKVKRYKEEVVTIIHEYFLSDD 436
A+ + S+ + G+ + + V +E+ ++ EY LS D
Sbjct: 284 GTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLSGD 343
Query: 437 IPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--KEMASVLLSALHIEIFSTEDIVN 494
I E L++L P F+ + + I + ++ K + +L S + + +
Sbjct: 344 ISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKR 403
Query: 495 GFVMLLESAEDTALDILDASNELALFL 521
G+ + D LD+ + + L F+
Sbjct: 404 GYERIYNEIPDINLDVPHSYSVLERFV 430
>sp|Q98TX3|PDCD4_CHICK Programmed cell death protein 4 OS=Gallus gallus GN=PDCD4 PE=2 SV=1
Length = 467
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 166/324 (51%), Gaps = 18/324 (5%)
Query: 81 TWGKLLDTDVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIEEYFSTGD 138
T G++ D + +D DPNYD +E V T+ PLD+ ++K + II+EYF GD
Sbjct: 124 TPGQVYDVE---EVDIKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQEYFEHGD 178
Query: 139 VEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGF 198
+ L++L E VS+A++ +EM S L+S L V+S + F
Sbjct: 179 TNEVSEMLKDLNLGEMKYSVPVLAVSLALEGKASHREMTSKLISDLCGTVVSKTDVEKSF 238
Query: 199 VILLESADDLAVDILDAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAE 258
LL+ DL +D A ++ F+ARAV D IL ++ K T+ + Q +
Sbjct: 239 DKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSSTYIDGYKGTVDS----IQARAALD 294
Query: 259 KS--YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGV 315
++ LS + ++ WG G +V+ + K+I LL+EY+ SGD EA RC++EL V
Sbjct: 295 RATVLLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLLKEYLLSGDLLEAERCLQELEV 354
Query: 316 SFFHHEVVKRALVLAMEIRTAE---PLILKLLKEAAEEGLISSSQMAKGFARLEESLDDL 372
FHHE+V A+V+ +E T E ++L LLK + +I+ QM +G+ R+ + D+
Sbjct: 355 PHFHHELVYEAIVMVLE-STGEKTFKMMLDLLKSLSRSSVITMDQMKRGYERVYCEIPDI 413
Query: 373 ALDIPSARNLFQSIVPVAISEGWL 396
LD+P + ++ + V G +
Sbjct: 414 NLDVPHSYSVLERFVEECFQAGII 437
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 141/277 (50%), Gaps = 6/277 (2%)
Query: 420 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 479
+++ + II EYF D E+ L+DL E ++LA++ K +EM S L+
Sbjct: 162 FEKTLTPIIQEYFEHGDTNEVSEMLKDLNLGEMKYSVPVLAVSLALEGKASHREMTSKLI 221
Query: 480 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 539
S L + S D+ F LL+ D LD A + F+ARAV D +L+ ++
Sbjct: 222 SDLCGTVVSKTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSSTYIDGYK 281
Query: 540 SKLPPNCSGSETVRVARSLIAARHAGERLLRCWGGGTG-WAVEDAKDKIMKLLEEYESGG 598
+ + + A L++ G+R+ WG G G +V+ +I LL+EY G
Sbjct: 282 GTV-DSIQARAALDRATVLLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLLKEYLLSG 340
Query: 599 VVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQMT 654
+ EA +C+++L +P F+HE+V +A+VM +E ++ MLDLL+ +IT +QM
Sbjct: 341 DLLEAERCLQELEVPHFHHELVYEAIVMVLESTGEKTFKMMLDLLKSLSRSSVITMDQMK 400
Query: 655 KGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWL 691
+G+ R+ + D+ LD+P++ +VE + G +
Sbjct: 401 RGYERVYCEIPDINLDVPHSYSVLERFVEECFQAGII 437
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 287 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPLILKLLKE 346
+K + +++EY E GD E +++L + + V A+ LA+E + + + L
Sbjct: 163 EKTLTPIIQEYFEHGDTNEVSEMLKDLNLGEMKYSVPVLAVSLALEGKASHREMTSKLIS 222
Query: 347 AAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGE 406
++S + + K F +L + L DL LD P A L + A+ +G L ++++ G
Sbjct: 223 DLCGTVVSKTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSSTYID--GY 280
Query: 407 DGRVQQ-------------------------------EDEKVKRYKEEVVTIIHEYFLSD 435
G V + VK +E+ ++ EY LS
Sbjct: 281 KGTVDSIQARAALDRATVLLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLLKEYLLSG 340
Query: 436 DIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--KEMASVLLSALHIEIFSTEDIV 493
D+ E R L++L P F+ + + I + ++ + K M +L S + + + +
Sbjct: 341 DLLEAERCLQELEVPHFHHELVYEAIVMVLESTGEKTFKMMLDLLKSLSRSSVITMDQMK 400
Query: 494 NGFVMLLESAEDTALDILDASNELALFL 521
G+ + D LD+ + + L F+
Sbjct: 401 RGYERVYCEIPDINLDVPHSYSVLERFV 428
>sp|Q9JID1|PDCD4_RAT Programmed cell death protein 4 OS=Rattus norvegicus GN=Pdcd4 PE=1
SV=2
Length = 469
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 158/313 (50%), Gaps = 14/313 (4%)
Query: 89 DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIEEYFSTGDVEVAASDL 146
DVE +D DPNYD +E V T+ PLD+ ++K + II+EYF GD A L
Sbjct: 132 DVE-EVDVKDPNYDDDQE--NCVYETVVLPLDETAFEKTLTPIIQEYFEHGDTNEVAEML 188
Query: 147 RELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGFVILLESAD 206
R+L E VS+A++ +EM S LLS L V+S + + F LL+
Sbjct: 189 RDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTNDVEKSFDKLLKDLP 248
Query: 207 DLAVDILDAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKS--YLSA 264
+LA+D A ++ F+ARAV D IL ++ K T+ Q +K+ LS
Sbjct: 249 ELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV----QARAALDKATVLLSM 304
Query: 265 PHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVV 323
+ + WG G V + K+I LL+EY+ SGD EA C++EL V FHHE+V
Sbjct: 305 SKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLSGDMSEAEHCLKELEVPHFHHELV 364
Query: 324 KRALVLAMEI--RTAEPLILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARN 381
A+V+ +E +A ++L LLK + I+ QM +G+ R+ + D+ LD+P + +
Sbjct: 365 YEAIVMVLESTGESAFKMMLDLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYS 424
Query: 382 LFQSIVPVAISEG 394
+ + V G
Sbjct: 425 VLERFVEECFQAG 437
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 8/276 (2%)
Query: 420 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 479
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 480 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 539
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++ S
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID--S 281
Query: 540 SKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGWA-VEDAKDKIMKLLEEYESG 597
K +C + A L++ G+R WG G G V +I LL+EY
Sbjct: 282 YKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLS 341
Query: 598 GVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQM 653
G +SEA C+++L +P F+HE+V +A+VM +E + MLDLL+ + IT +QM
Sbjct: 342 GDMSEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMMLDLLKSLWKSSTITIDQM 401
Query: 654 TKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 689
+G+ RI + + D+ LD+P++ +VE + G
Sbjct: 402 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 287 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAE-PLILKLLK 345
+K + +++EY E GD E +R+L + V A+ LA+E + + + KLL
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 346 EAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWL--------- 396
+ ++S++ + K F +L + L +LALD P A L + A+ +G L
Sbjct: 225 DLCGT-VMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYK 283
Query: 397 -------------DASFMKSLGEDGRVQQE-------DEKVKRYKEEVVTIIHEYFLSDD 436
A+ + S+ + G+ + + V +E+ ++ EY LS D
Sbjct: 284 GTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLSGD 343
Query: 437 IPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--KEMASVLLSALHIEIFSTEDIVN 494
+ E L++L P F+ + + I + ++ K M +L S + + +
Sbjct: 344 MSEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMMLDLLKSLWKSSTITIDQMKR 403
Query: 495 GFVMLLESAEDTALDILDASNELALFL 521
G+ + D LD+ + + L F+
Sbjct: 404 GYERIYNEIPDINLDVPHSYSVLERFV 430
>sp|Q53EL6|PDCD4_HUMAN Programmed cell death protein 4 OS=Homo sapiens GN=PDCD4 PE=1 SV=2
Length = 469
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 158/314 (50%), Gaps = 16/314 (5%)
Query: 89 DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIEEYFSTGDVEVAASDL 146
DVE +D DPNYD +E V T+ PLD+ ++K + II+EYF GD A L
Sbjct: 132 DVE-EVDVKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEML 188
Query: 147 RELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGFVILLESAD 206
R+L E VS+A++ +EM S LLS L V+S + F LL+
Sbjct: 189 RDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTTDVEKSFDKLLKDLP 248
Query: 207 DLAVDILDAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKS--YLSA 264
+LA+D A ++ F+ARAV D IL ++ K T+ Q +K+ LS
Sbjct: 249 ELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV----QARAALDKATVLLSM 304
Query: 265 PHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVV 323
+ + WG G +V + K+I LL+EY+ SGD EA C++EL V FHHE+V
Sbjct: 305 SKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELV 364
Query: 324 KRALVLAMEIRTAEP---LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSAR 380
A+++ +E T E +IL LLK + I+ QM +G+ R+ + D+ LD+P +
Sbjct: 365 YEAIIMVLE-STGESTFKMILDLLKSLWKSSTITVDQMKRGYERIYNEIPDINLDVPHSY 423
Query: 381 NLFQSIVPVAISEG 394
++ + V G
Sbjct: 424 SVLERFVEECFQAG 437
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 141/278 (50%), Gaps = 8/278 (2%)
Query: 418 KRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASV 477
+ +++ + II EYF D E+ L DL E ++LA++ K +EM S
Sbjct: 162 RAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSK 221
Query: 478 LLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEE 537
LLS L + ST D+ F LL+ + ALD A + F+ARAV D +L ++
Sbjct: 222 LLSDLCGTVMSTTDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID- 280
Query: 538 ISSKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTG-WAVEDAKDKIMKLLEEYE 595
S K +C + A L++ G+R WG G G +V +I LL+EY
Sbjct: 281 -SYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYL 339
Query: 596 SGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTN 651
G +SEA C+++L +P F+HE+V +A++M +E + +LDLL+ + IT +
Sbjct: 340 LSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVD 399
Query: 652 QMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 689
QM +G+ RI + + D+ LD+P++ +VE + G
Sbjct: 400 QMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 287 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAE-PLILKLLK 345
+K + +++EY E GD E +R+L + V A+ LA+E + + + KLL
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 346 EAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWL--------- 396
+ ++S++ + K F +L + L +LALD P A L + A+ +G L
Sbjct: 225 DLCGT-VMSTTDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYK 283
Query: 397 -------------DASFMKSLGEDGRVQQE-------DEKVKRYKEEVVTIIHEYFLSDD 436
A+ + S+ + G+ + + V +E+ ++ EY LS D
Sbjct: 284 GTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGD 343
Query: 437 IPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--KEMASVLLSALHIEIFSTEDIVN 494
I E L++L P F+ + + I + ++ K + +L S + + +
Sbjct: 344 ISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKR 403
Query: 495 GFVMLLESAEDTALDILDASNELALFL 521
G+ + D LD+ + + L F+
Sbjct: 404 GYERIYNEIPDINLDVPHSYSVLERFV 430
>sp|Q5R8S3|PDCD4_PONAB Programmed cell death protein 4 OS=Pongo abelii GN=PDCD4 PE=2 SV=1
Length = 469
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 157/314 (50%), Gaps = 16/314 (5%)
Query: 89 DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIEEYFSTGDVEVAASDL 146
DVE +D DPNYD +E V T+ PLD+ ++K + II+EYF GD A L
Sbjct: 132 DVE-EVDVKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQEYFEHGDTNEVAEML 188
Query: 147 RELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGFVILLESAD 206
R+L E VS+A++ +EM S LLS L V+S + F L+
Sbjct: 189 RDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTSDVEKSFDKSLKDLP 248
Query: 207 DLAVDILDAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKS--YLSA 264
+LA+D A ++ F+ARAV D IL ++ K T+ Q +K+ LS
Sbjct: 249 ELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV----QARAALDKATVLLSM 304
Query: 265 PHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVV 323
+ + WG G +V + K+I LL+EY+ SGD EA C++EL V FHHE+V
Sbjct: 305 SKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELV 364
Query: 324 KRALVLAMEIRTAEP---LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSAR 380
A+++ +E T E +IL LLK + I+ QM +G+ R+ + D+ LD+P +
Sbjct: 365 YEAIIMVLE-STGESTFKMILDLLKSLWKSSTITVDQMKRGYERIYNEIPDINLDVPHSY 423
Query: 381 NLFQSIVPVAISEG 394
++ + V G
Sbjct: 424 SVLERFVEECFQAG 437
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 140/278 (50%), Gaps = 8/278 (2%)
Query: 418 KRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASV 477
+ +++ + II EYF D E+ L DL E ++LA++ K +EM S
Sbjct: 162 RAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSK 221
Query: 478 LLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEE 537
LLS L + ST D+ F L+ + ALD A + F+ARAV D +L ++
Sbjct: 222 LLSDLCGTVMSTSDVEKSFDKSLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID- 280
Query: 538 ISSKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTG-WAVEDAKDKIMKLLEEYE 595
S K +C + A L++ G+R WG G G +V +I LL+EY
Sbjct: 281 -SYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYL 339
Query: 596 SGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTN 651
G +SEA C+++L +P F+HE+V +A++M +E + +LDLL+ + IT +
Sbjct: 340 LSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVD 399
Query: 652 QMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 689
QM +G+ RI + + D+ LD+P++ +VE + G
Sbjct: 400 QMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 287 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAE-PLILKLLK 345
+K + +++EY E GD E +R+L + V A+ LA+E + + + KLL
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 346 EAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWL--------- 396
+ ++S+S + K F + + L +LALD P A L + A+ +G L
Sbjct: 225 DLCGT-VMSTSDVEKSFDKSLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYK 283
Query: 397 -------------DASFMKSLGEDGRVQQE-------DEKVKRYKEEVVTIIHEYFLSDD 436
A+ + S+ + G+ + + V +E+ ++ EY LS D
Sbjct: 284 GTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGD 343
Query: 437 IPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--KEMASVLLSALHIEIFSTEDIVN 494
I E L++L P F+ + + I + ++ K + +L S + + +
Sbjct: 344 ISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKR 403
Query: 495 GFVMLLESAEDTALDILDASNELALFL 521
G+ + D LD+ + + L F+
Sbjct: 404 GYERIYNEIPDINLDVPHSYSVLERFV 430
>sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1
OS=Arabidopsis thaliana GN=EIF(ISO)4G1 PE=1 SV=1
Length = 780
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 271 VERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLA 330
VE+ ++ E +++K LL EY EA +C+ ELG+ +H E VK A+ L+
Sbjct: 602 VEKPQPSGPKLSEEVLQRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLS 661
Query: 331 MEIR--TAEPLILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVP 388
+E EP I LL+ + +++ + GF LDD+ +D+P A N F IV
Sbjct: 662 LEKSPPVVEP-IATLLEYLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVG 720
Query: 389 VAISEGWLDASFMKSL---GEDGRVQQ 412
I G +D ++ + ED R Q+
Sbjct: 721 KLILAGGVDFKLVREIIGKMEDDRFQK 747
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 586 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQEC 642
K LLEEY + ++ EA QC+ +LG+P ++ E VK+A+ +++EK + + LL+
Sbjct: 620 KTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYL 679
Query: 643 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 678
S+ ++ + GF LDD+ +D+P A F
Sbjct: 680 LSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNF 715
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 123 KKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLS 182
++ S++EEYF+ + A + ELG YHP F+K +S+++++ E + LL
Sbjct: 618 QRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLE 677
Query: 183 ALYA-DVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVV 228
L + V++P + GF++ DD+ +D+ A + V + ++
Sbjct: 678 YLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLIL 724
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 426 TIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE-MASVLLSALHI 484
+++ EYF + E ++ +E+LG P ++P F+K+ I+L++++ E +A++L L
Sbjct: 623 SLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYLLSK 682
Query: 485 EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVI 526
++ + +D+ GF++ +D +D+ A N + + ++
Sbjct: 683 KVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLIL 724
>sp|P79398|IF4G2_RABIT Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus
cuniculus GN=EIF4G2 PE=2 SV=1
Length = 907
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 421 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 475
KEE++ T++ EY S + E + ++++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVKEMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 476 SVLLSALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 531
S L+S L E I ++++ + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIGTSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 124 KAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMASVLLS 182
K +++ EY ++G+ A + ++E+ + ++ P + +++ +++DR D++KE AS L+S
Sbjct: 546 KLTETVVTEYLNSGNANEAVNGVKEMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLIS 605
Query: 183 ALYADVI-SPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L + I + D F+ +L+ L VDI LA F ARA++ +++
Sbjct: 606 LLKQEGIGTSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELV 656
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 583 AKDKIMKLLE----EYESGGVVSEACQCIRDLGMP-FFNHEVVKKALVMAMEK------K 631
+K++++KL E EY + G +EA ++++ P F E++ K +++++++ K
Sbjct: 540 SKEELLKLTETVVTEYLNSGNANEAVNGVKEMRAPKHFLPEMLSKVIILSLDRSDEDKEK 599
Query: 632 NDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYA 685
++ LL++ EG+ T++ + F + D L +DIP K ++ ++A
Sbjct: 600 ASSLISLLKQ---EGIGTSDNFMQAFLNVLDQCPKLEVDIPLVK---SYLAQFA 647
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 284 EEVKKKIADLLREYVESGDAFEACRCIREL-GVSFFHHEVVKRALVLAM----EIRTAEP 338
EE+ K ++ EY+ SG+A EA ++E+ F E++ + ++L++ E +
Sbjct: 542 EELLKLTETVVTEYLNSGNANEAVNGVKEMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 601
Query: 339 LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAI 391
++ LLK +EG+ +S + F + + L +DIP ++ AI
Sbjct: 602 SLISLLK---QEGIGTSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAI 651
>sp|Q5R7J9|IF4G2_PONAB Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 421 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 475
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 476 SVLLSALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 531
S L+S L E I ++++ + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 124 KAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMASVLLS 182
K +++ EY ++G+ A + +RE+ + ++ P + +++ +++DR D++KE AS L+S
Sbjct: 546 KLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLIS 605
Query: 183 ALYADVI-SPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L + I + D F+ +L+ L VDI LA F ARA++ +++
Sbjct: 606 LLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELV 656
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 583 AKDKIMKLLE----EYESGGVVSEACQCIRDLGMP-FFNHEVVKKALVMAMEK------K 631
+K++++KL E EY + G +EA +R++ P F E++ K +++++++ K
Sbjct: 540 SKEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 599
Query: 632 NDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYA 685
++ LL++ EG+ T++ + F + D L +DIP K ++ ++A
Sbjct: 600 ASSLISLLKQ---EGIATSDNFMQAFLNVLDQCPKLEVDIPLVK---SYLAQFA 647
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 284 EEVKKKIADLLREYVESGDAFEACRCIREL-GVSFFHHEVVKRALVLAM----EIRTAEP 338
EE+ K ++ EY+ SG+A EA +RE+ F E++ + ++L++ E +
Sbjct: 542 EELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 601
Query: 339 LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAI 391
++ LLK +EG+ +S + F + + L +DIP ++ AI
Sbjct: 602 SLISLLK---QEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAI 651
>sp|Q62448|IF4G2_MOUSE Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus
GN=Eif4g2 PE=1 SV=2
Length = 906
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 124 KAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMASVLLS 182
K +++ +Y ++G+ A S +RE+ + ++ P + +++ +++DR D++KE AS L+S
Sbjct: 545 KLTEAVVTDYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLIS 604
Query: 183 ALYADVI-SPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L + I + D F+ +LE L VDI LA F ARA++ +++
Sbjct: 605 LLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELV 655
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 415 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 473
E++ + E VVT +Y S + + + + ++ AP+ F P L KVI L++DR + +KE
Sbjct: 541 EELLKLTEAVVT---DYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKE 597
Query: 474 MASVLLSALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 531
AS L+S L E I ++++ + F+ +LE +DI + LA F ARA+I ++++
Sbjct: 598 KASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELVS 656
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 284 EEVKKKIADLLREYVESGDAFEACRCIREL-GVSFFHHEVVKRALVLAM----EIRTAEP 338
EE+ K ++ +Y+ SG+A +A +RE+ F E++ + ++L++ E +
Sbjct: 541 EELLKLTEAVVTDYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 600
Query: 339 LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAI 391
++ LLK+ EG+ +S + F + E L +DIP ++ AI
Sbjct: 601 SLISLLKQ---EGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAI 650
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 583 AKDKIMKLLE----EYESGGVVSEACQCIRDLGMP-FFNHEVVKKALVMAMEK------K 631
+K++++KL E +Y + G ++A +R++ P F E++ K +++++++ K
Sbjct: 539 SKEELLKLTEAVVTDYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 598
Query: 632 NDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYA 685
++ LL++ EG+ T++ + F + + L +DIP K ++ ++A
Sbjct: 599 ASSLISLLKQ---EGIATSDNFMQAFLNVLEQCPKLEVDIPLVK---SYLAQFA 646
>sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens
GN=EIF4G2 PE=1 SV=1
Length = 907
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 421 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 475
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 476 SVLLSALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 531
S L+S L E I ++++ + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 124 KAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMASVLLS 182
K +++ EY ++G+ A + +RE+ + ++ P + +++ +++DR D++KE AS L+S
Sbjct: 546 KLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLIS 605
Query: 183 ALYADVI-SPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L + I + D F+ +L+ L VDI LA F ARA++ +++
Sbjct: 606 LLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELV 656
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 583 AKDKIMKLLE----EYESGGVVSEACQCIRDLGMP-FFNHEVVKKALVMAMEK------K 631
+K++++KL E EY + G +EA +R++ P F E++ K +++++++ K
Sbjct: 540 SKEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 599
Query: 632 NDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYA 685
++ LL++ EG+ T++ + F + D L +DIP K ++ ++A
Sbjct: 600 ASSLISLLKQ---EGIATSDNFMQAFLNVLDQCPKLEVDIPLVK---SYLAQFA 647
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 284 EEVKKKIADLLREYVESGDAFEACRCIREL-GVSFFHHEVVKRALVLAM----EIRTAEP 338
EE+ K ++ EY+ SG+A EA +RE+ F E++ + ++L++ E +
Sbjct: 542 EELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 601
Query: 339 LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAI 391
++ LLK +EG+ +S + F + + L +DIP ++ AI
Sbjct: 602 SLISLLK---QEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAI 651
>sp|Q95L46|IF4G2_BOVIN Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 421 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 475
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 476 SVLLSALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 531
S L+S L E I ++++ + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 124 KAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMASVLLS 182
K +++ EY ++G+ A + +RE+ + ++ P + +++ +++DR D++KE AS L+S
Sbjct: 546 KLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLIS 605
Query: 183 ALYADVI-SPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L + I + D F+ +L+ L VDI LA F ARA++ +++
Sbjct: 606 LLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELV 656
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 583 AKDKIMKLLE----EYESGGVVSEACQCIRDLGMP-FFNHEVVKKALVMAMEK------K 631
+K++++KL E EY + G +EA +R++ P F E++ K +++++++ K
Sbjct: 540 SKEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 599
Query: 632 NDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYA 685
++ LL++ EG+ T++ + F + D L +DIP K ++ ++A
Sbjct: 600 ASSLISLLKQ---EGIATSDNFMQAFLNVLDQCPKLEVDIPLVK---SYLAQFA 647
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 284 EEVKKKIADLLREYVESGDAFEACRCIREL-GVSFFHHEVVKRALVLAM----EIRTAEP 338
EE+ K ++ EY+ SG+A EA +RE+ F E++ + ++L++ E +
Sbjct: 542 EELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 601
Query: 339 LILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAI 391
++ LLK +EG+ +S + F + + L +DIP ++ AI
Sbjct: 602 SLISLLK---QEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAI 651
>sp|O82233|IF4G2_ARATH Eukaryotic translation initiation factor isoform 4G-2
OS=Arabidopsis thaliana GN=EIF(ISO)4G2 PE=1 SV=1
Length = 747
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 586 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQEC 642
K LLEEY S +V EA QC+ +L P ++ E+VK+ + + +EK + + LL+
Sbjct: 586 KTKSLLEEYFSIRLVDEALQCVEELKSPSYHPELVKETISLGLEKNPPLVEPIAKLLKHL 645
Query: 643 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYV 682
S+ ++T+ + G LDD+ +D+P A F ++
Sbjct: 646 ISKNVLTSKDLGAGCLLYGSMLDDIGIDLPKAPNSFGEFL 685
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 278 STHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-- 335
+ + E+++K LL EY EA +C+ EL +H E+VK + L +E
Sbjct: 575 ANSLNAGELERKTKSLLEEYFSIRLVDEALQCVEELKSPSYHPELVKETISLGLEKNPPL 634
Query: 336 AEPLILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGW 395
EP I KLLK + +++S + G LDD+ +D+P A N F + +S
Sbjct: 635 VEP-IAKLLKHLISKNVLTSKDLGAGCLLYGSMLDDIGIDLPKAPNSFGEFLGELVSAKV 693
Query: 396 LDASFMKSL 404
LD ++ +
Sbjct: 694 LDFELVRDV 702
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 121 DYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVL 180
+ ++ S++EEYFS V+ A + EL S YHP +K +S+ ++++ E + L
Sbjct: 582 ELERKTKSLLEEYFSIRLVDEALQCVEELKSPSYHPELVKETISLGLEKNPPLVEPIAKL 641
Query: 181 LSALYA-DVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L L + +V++ + G ++ DD+ +D+ A + F+ V +L
Sbjct: 642 LKHLISKNVLTSKDLGAGCLLYGSMLDDIGIDLPKAPNSFGEFLGELVSAKVL 694
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 426 TIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE-MASVLLSALHI 484
+++ EYF + E ++ +E+L +P ++P +K+ I+L +++ E +A +L +
Sbjct: 589 SLLEEYFSIRLVDEALQCVEELKSPSYHPELVKETISLGLEKNPPLVEPIAKLLKHLISK 648
Query: 485 EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVL 530
+ +++D+ G ++ +D +D+ A N FL V VL
Sbjct: 649 NVLTSKDLGAGCLLYGSMLDDIGIDLPKAPNSFGEFLGELVSAKVL 694
>sp|G5CEW6|IF4G_WHEAT Eukaryotic translation initiation factor 4G OS=Triticum aestivum PE=1
SV=1
Length = 1488
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 406 EDGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAM 465
++GR + + +E+ + I EY+ + D E+ +E+L AP F P + + +
Sbjct: 1286 QEGRSGNKSYSEEELREKSIATIREYYSAKDEKEVALCIEELNAPSFYPSLVSLWVNDSF 1345
Query: 466 DRKNREKEMASVLLSALH---IEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLA 522
+RK+ E+E+ + L L+ + S ++ G +L S ED D A+ L LA
Sbjct: 1346 ERKDMERELLAKLFVGLYNGGYNLLSKPQLIEGLSSVLASLEDALSDSPRAAEYLGRLLA 1405
Query: 523 RAVIDDVL 530
R V++ +L
Sbjct: 1406 RFVVEKIL 1413
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 123 KKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLS 182
+K++A+I EY+S D + A + EL + ++P + V+ + +R D E+E+ + L
Sbjct: 1302 EKSIATI-REYYSAKDEKEVALCIEELNAPSFYPSLVSLWVNDSFERKDMERELLAKLFV 1360
Query: 183 ALYA---DVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
LY +++S Q+ +G +L S +D D A + L +AR VV+ IL
Sbjct: 1361 GLYNGGYNLLSKPQLIEGLSSVLASLEDALSDSPRAAEYLGRLLARFVVEKIL 1413
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 266 HHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKR 325
H E R G ++ + EE+++K +REY + D E CI EL F+ +V
Sbjct: 1281 HRPASQEGRSGNKSY-SEEELREKSIATIREYYSAKDEKEVALCIEELNAPSFYPSLVSL 1339
Query: 326 ALVLAMEIRTAE-PLILKLLKEAAEEG--LISSSQMAKGFARLEESLDDLALDIPSA 379
+ + E + E L+ KL G L+S Q+ +G + + SL+D D P A
Sbjct: 1340 WVNDSFERKDMERELLAKLFVGLYNGGYNLLSKPQLIEGLSSVLASLEDALSDSPRA 1396
Score = 36.2 bits (82), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 10/147 (6%)
Query: 536 EEISSKLPPNCSGSETVRVARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYE 595
E+ SS++P SG + + R A + G ++ E+ ++K + + EY
Sbjct: 1256 EDTSSRIPDRFSGRIATAAQSASSSHRPASQE---GRSGNKSYSEEELREKSIATIREYY 1312
Query: 596 SGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECF------SEGLIT 649
S E CI +L P F +V + + E+K D +LL + F L++
Sbjct: 1313 SAKDEKEVALCIEELNAPSFYPSLVSLWVNDSFERK-DMERELLAKLFVGLYNGGYNLLS 1371
Query: 650 TNQMTKGFTRIKDGLDDLALDIPNAKE 676
Q+ +G + + L+D D P A E
Sbjct: 1372 KPQLIEGLSSVLASLEDALSDSPRAAE 1398
>sp|Q41583|IF4G2_WHEAT Eukaryotic translation initiation factor isoform 4G-2 OS=Triticum
aestivum PE=2 SV=1
Length = 787
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 586 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQEC 642
K LLEEY ++ EA QCI +L P ++ E+VK+A+ +A++K D ++ LL+
Sbjct: 625 KTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLEHL 684
Query: 643 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 678
+++ T + G L+D+ +D+P A +F
Sbjct: 685 YTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQF 720
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 234 PAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADL 293
P+ +T + LPA + +A + + P A S + ++KK A L
Sbjct: 577 PSSITASPTPLPAQTTASPKPSSATPASVPIPDKA-------ASSAKVIPAGLEKKTASL 629
Query: 294 LREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTA--EPLILKLLKEAAEEG 351
L EY EA +CI EL +H E+VK A+ LA++ + +PL+ KLL+ +
Sbjct: 630 LEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLV-KLLEHLYTKK 688
Query: 352 LISSSQMAKGFARLEESLDDLALDIPSARNLFQSIV 387
+ + G L+D+ +D+P A F ++
Sbjct: 689 TFKTEDLENGCLLYGSLLEDIGIDLPKAPTQFGEVI 724
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 421 KEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLS 480
+++ +++ EYF + E + +E+L +P+++P +K+ I LA+D+ + LL
Sbjct: 623 EKKTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLE 682
Query: 481 ALHI-EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVI 526
L+ + F TED+ NG ++ ED +D+ A + +AR ++
Sbjct: 683 HLYTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQFGEVIARLIL 729
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 123 KKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLS 182
+K AS++EEYF ++ A + EL S +YHP +K +++A+D+ + LL
Sbjct: 623 EKKTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLE 682
Query: 183 ALYA-DVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVV 228
LY + + +G ++ +D+ +D+ A +AR ++
Sbjct: 683 HLYTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQFGEVIARLIL 729
>sp|Q03387|IF4G1_WHEAT Eukaryotic translation initiation factor isoform 4G-1 OS=Triticum
aestivum PE=1 SV=2
Length = 788
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 584 KDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQ 640
+ K LLEEY ++ EA QCI +L P ++ E+VK+A+ +A++K D ++ LL+
Sbjct: 624 QKKTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLE 683
Query: 641 ECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 678
+++ T + G L+D+ +D+P A +F
Sbjct: 684 HLYTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQF 721
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 234 PAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADL 293
P+ LT + LPA + +A + + P A S + ++KK A L
Sbjct: 578 PSSLTASPTPLPAQTTASPKPSSATPASVPIPDKA-------ASSAKVIPAGLQKKTASL 630
Query: 294 LREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTA--EPLILKLLKEAAEEG 351
L EY EA +CI EL +H E+VK A+ LA++ + +PL+ KLL+ +
Sbjct: 631 LEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLV-KLLEHLYTKK 689
Query: 352 LISSSQMAKGFARLEESLDDLALDIPSARNLFQSIV 387
+ + G L+D+ +D+P A F +V
Sbjct: 690 TFKTEDLENGCLLYGSLLEDIGIDLPKAPTQFGEVV 725
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 421 KEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLS 480
+++ +++ EYF + E + +E+L +P+++P +K+ I LA+D+ + LL
Sbjct: 624 QKKTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLE 683
Query: 481 ALHI-EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVI 526
L+ + F TED+ NG ++ ED +D+ A + +AR ++
Sbjct: 684 HLYTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQFGEVVARLIL 730
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 123 KKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLS 182
+K AS++EEYF ++ A + EL S +YHP +K +++A+D+ + LL
Sbjct: 624 QKKTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLE 683
Query: 183 ALYA-DVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVV 228
LY + + +G ++ +D+ +D+ A VAR ++
Sbjct: 684 HLYTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQFGEVVARLIL 730
>sp|Q6K641|IF4G2_ORYSJ Eukaryotic translation initiation factor isoform 4G-2 OS=Oryza
sativa subsp. japonica GN=Os02g0611500 PE=2 SV=1
Length = 780
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 259 KSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFF 318
KS + AP +VE+ + + E++KK LL+EY EA +CI EL +
Sbjct: 587 KSLIPAPSVDPIVEQP-AAAPKPSSTELQKKTISLLKEYFHILLLHEAQQCIEELKSPDY 645
Query: 319 HHEVVKRALVLAME--IRTAEPLILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDI 376
+ EVVK A+ LA++ + +PL L+LL+ + + ++ + G LD+LA+D+
Sbjct: 646 YPEVVKEAINLALDKGTNSIDPL-LRLLEHLYNKNVFKATDLETGCLLYSSLLDELAIDL 704
Query: 377 PSARNLFQSIV 387
P A F ++
Sbjct: 705 PKAPVHFGEVI 715
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 584 KDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQ 640
+ K + LL+EY ++ EA QCI +L P + EVVK+A+ +A++K D +L LL+
Sbjct: 614 QKKTISLLKEYFHILLLHEAQQCIEELKSPDYYPEVVKEAINLALDKGTNSIDPLLRLLE 673
Query: 641 ECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 678
+++ + + G LD+LA+D+P A F
Sbjct: 674 HLYNKNVFKATDLETGCLLYSSLLDELAIDLPKAPVHF 711
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 99 PNYDSGEEPYQLVGATISDPL------------DDYKKAVASIIEEYFSTGDVEVAASDL 146
P+ +G P L+ A DP+ + +K S+++EYF + A +
Sbjct: 579 PSQTTGP-PKSLIPAPSVDPIVEQPAAAPKPSSTELQKKTISLLKEYFHILLLHEAQQCI 637
Query: 147 RELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALY-ADVISPDQIRDGFVILLESA 205
EL S +Y+P +K +++A+D+ + LL LY +V + G ++
Sbjct: 638 EELKSPDYYPEVVKEAINLALDKGTNSIDPLLRLLEHLYNKNVFKATDLETGCLLYSSLL 697
Query: 206 DDLAVDILDAVDILALFVARAVVDDIL 232
D+LA+D+ A + R V+ L
Sbjct: 698 DELAIDLPKAPVHFGEVIGRLVLSHCL 724
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 421 KEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLS 480
+++ ++++ EYF + E + +E+L +P++ P +K+ I LA+D+ + LL
Sbjct: 614 QKKTISLLKEYFHILLLHEAQQCIEELKSPDYYPEVVKEAINLALDKGTNSIDPLLRLLE 673
Query: 481 ALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 531
L+ + +F D+ G ++ ++ A+D+ A + R V+ L+
Sbjct: 674 HLYNKNVFKATDLETGCLLYSSLLDELAIDLPKAPVHFGEVIGRLVLSHCLS 725
>sp|B9FXV5|IF4G_ORYSJ Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp.
japonica GN=Os07g0555200 PE=2 SV=2
Length = 1792
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 421 KEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLS 480
+E+ ++ I EY+ + D E+ +E+L AP F P + + + +RK+ E+E+ + L
Sbjct: 1605 REKSISAIREYYSAKDEKEVALCIEELNAPSFYPSVVSLWVNDSFERKDMERELLTKLFV 1664
Query: 481 AL---HIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEE 537
+L + S + G +L S ED D A+ L LAR V++ +L+ L+E
Sbjct: 1665 SLCNSRNNLLSKSHLTAGLATVLGSLEDALSDAPRAAEYLGRLLARFVVESILS---LQE 1721
Query: 538 ISS 540
+ +
Sbjct: 1722 VGT 1724
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 120 DDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASV 179
DD ++ S I EY+S D + A + EL + ++P + V+ + +R D E+E+ +
Sbjct: 1602 DDLREKSISAIREYYSAKDEKEVALCIEELNAPSFYPSVVSLWVNDSFERKDMERELLTK 1661
Query: 180 LLSAL---YADVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDIL 232
L +L +++S + G +L S +D D A + L +AR VV+ IL
Sbjct: 1662 LFVSLCNSRNNLLSKSHLTAGLATVLGSLEDALSDAPRAAEYLGRLLARFVVESIL 1717
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 257 AEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVS 316
A + + P + + G+ + +++++K +REY + D E CI EL
Sbjct: 1575 APNTQFAGPSNRPASQEGRSGNKLYSEDDLREKSISAIREYYSAKDEKEVALCIEELNAP 1634
Query: 317 FFHHEVVKRALVLAMEIRTAE-PLILKLLKE--AAEEGLISSSQMAKGFARLEESLDDLA 373
F+ VV + + E + E L+ KL + L+S S + G A + SL+D
Sbjct: 1635 SFYPSVVSLWVNDSFERKDMERELLTKLFVSLCNSRNNLLSKSHLTAGLATVLGSLEDAL 1694
Query: 374 LDIPSA 379
D P A
Sbjct: 1695 SDAPRA 1700
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 578 WAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLD 637
++ +D ++K + + EY S E CI +L P F VV + + E+K D +
Sbjct: 1599 YSEDDLREKSISAIREYYSAKDEKEVALCIEELNAPSFYPSVVSLWVNDSFERK-DMERE 1657
Query: 638 LLQECF------SEGLITTNQMTKGFTRIKDGLDDLALDIPNAKE 676
LL + F L++ + +T G + L+D D P A E
Sbjct: 1658 LLTKLFVSLCNSRNNLLSKSHLTAGLATVLGSLEDALSDAPRAAE 1702
>sp|Q84PB3|IF4G1_ORYSJ Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza
sativa subsp. japonica GN=Os04g0499300 PE=2 SV=2
Length = 793
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 277 GSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAME--IR 334
GS+H V+KK LL EY EA +CI EL ++ E+VK A+ LA++
Sbjct: 619 GSSHEMPAAVQKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPN 678
Query: 335 TAEPLILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIV 387
+PL+ +LL+ + + + + G L+D+ +D+P A LF +V
Sbjct: 679 FIDPLV-RLLEHLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALFGEVV 730
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 584 KDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQ 640
+ K + LLEEY ++ EA QCI +L P + E+VK+A+ +A++K D ++ LL+
Sbjct: 629 QKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLE 688
Query: 641 ECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 678
++ + T + G L+D+ +D+P A F
Sbjct: 689 HLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALF 726
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 421 KEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLS 480
+++ V+++ EYF + E + +E+L PE+ +K+ I LA+D+ + LL
Sbjct: 629 QKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLE 688
Query: 481 ALHI-EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNL 535
LH +IF TED+ G ++ ED +D L LA A+ +V+A L+L
Sbjct: 689 HLHAKKIFKTEDLKTGCLLYAALLEDIGID---------LPLAPALFGEVVARLSL 735
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 123 KKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLS 182
+K S++EEYF ++ A + EL EY+ +K +++A+D+ + LL
Sbjct: 629 QKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLE 688
Query: 183 ALYA-DVISPDQIRDGFVILLESADDLAVDILDAVDILALFVAR 225
L+A + + ++ G ++ +D+ +D+ A + VAR
Sbjct: 689 HLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALFGEVVAR 732
>sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana
GN=EIF4G PE=1 SV=2
Length = 1727
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 99 PNYDSGEEPYQLVGATISDPLDD------YKKAVASIIEEYFSTGDVEVAASDLRELGSS 152
P S + Q AT++ P ++ + S I+EY+S D ++++ S
Sbjct: 1511 PEVSSARQVLQGPSATVNSPRENALSEEQLENLSLSAIKEYYSARDENEIGMCMKDMNSP 1570
Query: 153 EYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYA---DVISPDQIRDGFVILLESADDLA 209
YHP I V+ + +R DKE+++ + LL L + ++ Q+ GF +L++ +D
Sbjct: 1571 AYHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSADNALNEVQLVKGFESVLKTLEDAV 1630
Query: 210 VDILDAVDILALFVARAVVDDIL 232
D A + L ++V + ++
Sbjct: 1631 NDAPKAAEFLGRIFGKSVTEKVV 1653
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 84/176 (47%), Gaps = 29/176 (16%)
Query: 362 FARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYK 421
FA L + DL+ ++ SAR + Q ++ + S E+ +++ E +
Sbjct: 1500 FASLSRA-SDLSPEVSSARQVLQG-----------PSATVNSPRENALSEEQLENLS--- 1544
Query: 422 EEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLSA 481
++ I EY+ + D E+ ++D+ +P ++P + +T + +RK++E++ LL+
Sbjct: 1545 ---LSAIKEYYSARDENEIGMCMKDMNSPAYHPTMISLWVTDSFERKDKERD----LLAK 1597
Query: 482 LHIEIFSTED-------IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVL 530
L + + + D +V GF +L++ ED D A+ L ++V + V+
Sbjct: 1598 LLVNLVKSADNALNEVQLVKGFESVLKTLEDAVNDAPKAAEFLGRIFGKSVTEKVV 1653
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 235 AFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLL 294
A L+RA P S QV+Q + +++P L E E+++ +
Sbjct: 1501 ASLSRASDLSPEVSSARQVLQ-GPSATVNSPRENALSE-----------EQLENLSLSAI 1548
Query: 295 REYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAE-----PLILKLLKEAAE 349
+EY + D E C++++ +H ++ + + E + E L++ L+K A
Sbjct: 1549 KEYYSARDENEIGMCMKDMNSPAYHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSA-- 1606
Query: 350 EGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGR 409
+ ++ Q+ KGF + ++L+D D P A I +++E + +L E GR
Sbjct: 1607 DNALNEVQLVKGFESVLKTLEDAVNDAPKAAEFLGRIFGKSVTEKVV------TLTEIGR 1660
Query: 410 VQQEDEKVKRYKEEVVTIIHEYFLSDDI 437
+ QE EE ++I E+ L D+
Sbjct: 1661 LIQEG------GEEPGSLI-EFGLGGDV 1681
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 588 MKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECF---- 643
+ ++EY S +E C++D+ P ++ ++ + + E+K D+ DLL +
Sbjct: 1545 LSAIKEYYSARDENEIGMCMKDMNSPAYHPTMISLWVTDSFERK-DKERDLLAKLLVNLV 1603
Query: 644 --SEGLITTNQMTKGFTRIKDGLDDLALDIPNAKE 676
++ + Q+ KGF + L+D D P A E
Sbjct: 1604 KSADNALNEVQLVKGFESVLKTLEDAVNDAPKAAE 1638
>sp|P41110|IF4G1_RABIT Eukaryotic translation initiation factor 4 gamma 1 OS=Oryctolagus
cuniculus GN=EIF4G1 PE=1 SV=1
Length = 1402
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 581 EDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKK---NDRMLD 637
E+ + K ++EEY + EA QC+++L P V+ + +E+ +RM
Sbjct: 1043 EELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGIESTLERSAIARERMGQ 1102
Query: 638 LLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPN 673
LL + G ++T Q +G I + +D+ +DIP+
Sbjct: 1103 LLHQLLCAGHLSTAQYYQGLYEILELAEDMEIDIPH 1138
Score = 40.0 bits (92), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 427 IIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDR----KNREKEMASVLLSAL 482
II EY +D+ E ++ +++L +P IF++ I ++R + R ++ LL A
Sbjct: 1052 IIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGIESTLERSAIARERMGQLLHQLLCAG 1111
Query: 483 HIEIFSTEDIVNGFVMLLESAEDTALDI 510
H+ ST G +LE AED +DI
Sbjct: 1112 HL---STAQYYQGLYEILELAEDMEIDI 1136
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 107 PYQLVGATISDPLDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMA 166
P A +S+ ++ +K +IIEEY D++ A ++EL S F++ +
Sbjct: 1032 PVSCAKAALSE--EELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGIEST 1089
Query: 167 MDRHDKEKE-MASVLLSALYADVISPDQIRDGFVILLESADDLAVDI 212
++R +E M +L L A +S Q G +LE A+D+ +DI
Sbjct: 1090 LERSAIARERMGQLLHQLLCAGHLSTAQYYQGLYEILELAEDMEIDI 1136
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 281 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-AEPL 339
++ EE++KK ++ EY+ D EA +C++EL V+ + +E A
Sbjct: 1040 LSEEELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGIESTLERSAIARER 1099
Query: 340 ILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEG 394
+ +LL + G +S++Q +G + E +D+ +DIP +V + EG
Sbjct: 1100 MGQLLHQLLCAGHLSTAQYYQGLYEILELAEDMEIDIPHVWLYLAELVTPIMQEG 1154
>sp|Q80XI3|IF4G3_MOUSE Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus
GN=Eif4g3 PE=1 SV=2
Length = 1579
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 281 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAME-IRTAEPL 339
++ EEV++K ++ E++ D EA +CI EL H VK + +E +
Sbjct: 1211 LSEEEVERKSKSIIDEFLHINDFKEATQCIEELSAQGPLHVFVKVGVEFTLERSQITRDH 1270
Query: 340 ILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWL 396
+ LL + + +S KGF+ E DD+A+DIP +V + EG +
Sbjct: 1271 MGHLLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPHIWLYLAELVTPMLKEGGI 1327
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 414 DEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE 473
+E+V+R + +II E+ +D E + +E+L A +F+K + ++R ++
Sbjct: 1213 EEEVERKSK---SIIDEFLHINDFKEATQCIEELSAQGPLHVFVKVGVEFTLERSQITRD 1269
Query: 474 -MASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAV 525
M +L + E S +D GF LE A+D A+DI + L+LA V
Sbjct: 1270 HMGHLLYQLVQSEKLSKQDFFKGFSETLELADDMAIDI----PHIWLYLAELV 1318
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 581 EDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLD 637
E+ + K +++E+ EA QCI +L H VK + +E+ D M
Sbjct: 1214 EEVERKSKSIIDEFLHINDFKEATQCIEELSAQGPLHVFVKVGVEFTLERSQITRDHMGH 1273
Query: 638 LLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPN 673
LL + ++ KGF+ + DD+A+DIP+
Sbjct: 1274 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPH 1309
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 120 DDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKE-MAS 178
++ ++ SII+E+ D + A + EL + F+K V ++R ++ M
Sbjct: 1214 EEVERKSKSIIDEFLHINDFKEATQCIEELSAQGPLHVFVKVGVEFTLERSQITRDHMGH 1273
Query: 179 VLLSALYADVISPDQIRDGFVILLESADDLAVDI 212
+L + ++ +S GF LE ADD+A+DI
Sbjct: 1274 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDI 1307
>sp|Q6NZJ6|IF4G1_MOUSE Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus
GN=Eif4g1 PE=1 SV=1
Length = 1600
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 119 LDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKE-MA 177
+D+ +K +IIEEY D++ A ++EL S F++ + ++R +E M
Sbjct: 1239 VDEVEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRLGIESTLERSTIAREHMG 1298
Query: 178 SVLLSALYADVISPDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDILP 233
+L L A +S Q G LE A+D+ +DI LA + + +D +P
Sbjct: 1299 RLLHQLLCAGHLSTAQYYQGLYETLELAEDMEIDIPHVWLYLAELITPILQEDGVP 1354
Score = 40.4 bits (93), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 281 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-AEPL 339
++V+EV+KK ++ EY+ D EA +C++EL V+ + +E T A
Sbjct: 1237 LSVDEVEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRLGIESTLERSTIAREH 1296
Query: 340 ILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIP 377
+ +LL + G +S++Q +G E +D+ +DIP
Sbjct: 1297 MGRLLHQLLCAGHLSTAQYYQGLYETLELAEDMEIDIP 1334
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 579 AVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRM 635
+V++ + K ++EEY + EA QC+++L P V+ + +E+ + M
Sbjct: 1238 SVDEVEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRLGIESTLERSTIAREHM 1297
Query: 636 LDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPN 673
LL + G ++T Q +G + +D+ +DIP+
Sbjct: 1298 GRLLHQLLCAGHLSTAQYYQGLYETLELAEDMEIDIPH 1335
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 427 IIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE-MASVLLSALHIE 485
II EY +D+ E ++ +++L +P IF++ I ++R +E M +L L
Sbjct: 1249 IIEEYLHLNDMKEAVQCVQELASPSLLFIFVRLGIESTLERSTIAREHMGRLLHQLLCAG 1308
Query: 486 IFSTEDIVNGFVMLLESAEDTALDI 510
ST G LE AED +DI
Sbjct: 1309 HLSTAQYYQGLYETLELAEDMEIDI 1333
>sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens
GN=EIF4G3 PE=1 SV=2
Length = 1585
Score = 40.0 bits (92), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 281 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAME-IRTAEPL 339
++ EE+++K ++ E++ D EA +C+ EL H V+ + +E +
Sbjct: 1217 LSEEELERKSKSIIDEFLHINDFKEAMQCVEELNAQGLLHVFVRVGVESTLERSQITRDH 1276
Query: 340 ILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGW---- 395
+ +LL + + +S KGF+ E DD+A+DIP +V + EG
Sbjct: 1277 MGQLLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPHIWLYLAELVTPMLKEGGISMR 1336
Query: 396 -LDASFMKSLGEDGR 409
L F K L GR
Sbjct: 1337 ELTIEFSKPLLPVGR 1351
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 426 TIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE-MASVLLSALHI 484
+II E+ +D E ++ +E+L A +F++ + ++R ++ M +L +
Sbjct: 1228 SIIDEFLHINDFKEAMQCVEELNAQGLLHVFVRVGVESTLERSQITRDHMGQLLYQLVQS 1287
Query: 485 EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAV 525
E S +D GF LE A+D A+DI + L+LA V
Sbjct: 1288 EKLSKQDFFKGFSETLELADDMAIDI----PHIWLYLAELV 1324
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 120 DDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKE-MAS 178
++ ++ SII+E+ D + A + EL + F++ V ++R ++ M
Sbjct: 1220 EELERKSKSIIDEFLHINDFKEAMQCVEELNAQGLLHVFVRVGVESTLERSQITRDHMGQ 1279
Query: 179 VLLSALYADVISPDQIRDGFVILLESADDLAVDI 212
+L + ++ +S GF LE ADD+A+DI
Sbjct: 1280 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDI 1313
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 581 EDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLD 637
E+ + K +++E+ EA QC+ +L H V+ + +E+ D M
Sbjct: 1220 EELERKSKSIIDEFLHINDFKEAMQCVEELNAQGLLHVFVRVGVESTLERSQITRDHMGQ 1279
Query: 638 LLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPN 673
LL + ++ KGF+ + DD+A+DIP+
Sbjct: 1280 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPH 1315
>sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens
GN=EIF4G1 PE=1 SV=4
Length = 1599
Score = 39.3 bits (90), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 107 PYQLVGATISDPLDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMA 166
P + A +S+ ++ +K +IIEEY D++ A ++EL S F++ V
Sbjct: 1229 PVSPLKAALSE--EELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVEST 1286
Query: 167 MDRHDKEKE-MASVLLSALYADVISPDQIRDGFVILLESADDLAVDI 212
++R +E M +L L A +S Q G +LE A+D+ +DI
Sbjct: 1287 LERSAIAREHMGQLLHQLLCAGHLSTAQYYQGLYEILELAEDMEIDI 1333
Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 427 IIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE-MASVLLSALHIE 485
II EY +D+ E ++ +++L +P IF++ + ++R +E M +L L
Sbjct: 1249 IIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAG 1308
Query: 486 IFSTEDIVNGFVMLLESAEDTALDI 510
ST G +LE AED +DI
Sbjct: 1309 HLSTAQYYQGLYEILELAEDMEIDI 1333
Score = 37.4 bits (85), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 281 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-AEPL 339
++ EE++KK ++ EY+ D EA +C++EL V+ + +E A
Sbjct: 1237 LSEEELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREH 1296
Query: 340 ILKLLKEAAEEGLISSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEG 394
+ +LL + G +S++Q +G + E +D+ +DIP +V + EG
Sbjct: 1297 MGQLLHQLLCAGHLSTAQYYQGLYEILELAEDMEIDIPHVWLYLAELVTPILQEG 1351
>sp|A1V5K3|KDSA_BURMS 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia mallei
(strain SAVP1) GN=kdsA PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L V +L D +I + AVVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILAEVKRQLNVPVLTDVHEIDEIAPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|Q62J09|KDSA_BURMA 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia mallei
(strain ATCC 23344) GN=kdsA PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L V +L D +I + AVVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILAEVKRQLNVPVLTDVHEIDEIAPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|A2SAU6|KDSA_BURM9 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia mallei
(strain NCTC 10229) GN=kdsA PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L V +L D +I + AVVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILAEVKRQLNVPVLTDVHEIDEIAPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|A3ML78|KDSA_BURM7 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia mallei
(strain NCTC 10247) GN=kdsA PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L V +L D +I + AVVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILAEVKRQLNVPVLTDVHEIDEIAPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|Q63SP9|KDSA1_BURPS 2-dehydro-3-deoxyphosphooctonate aldolase 1 OS=Burkholderia
pseudomallei (strain K96243) GN=kdsA1 PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L V +L D +I + AVVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILAEVKRQLNVPVLTDVHEIDEIAPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|B8FKS7|SYH_DESAA Histidine--tRNA ligase OS=Desulfatibacillum alkenivorans (strain
AK-01) GN=hisS PE=3 SV=1
Length = 419
Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 423 EVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNR 470
+++ ++H +F D+P+++ + LG PE P F + +I+ D+ +R
Sbjct: 141 QIMYMLHLFFTGLDVPDVVTHVNSLGCPECRPKFREALISFVSDKMDR 188
>sp|B4EDA2|KDSA_BURCJ 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia cepacia
(strain J2315 / LMG 16656) GN=kdsA PE=1 SV=1
Length = 284
Score = 37.0 bits (84), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L + +L D I + +VVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILSEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D RE S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAAREAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|A9AGW1|KDSA_BURM1 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia
multivorans (strain ATCC 17616 / 249) GN=kdsA PE=3 SV=1
Length = 284
Score = 37.0 bits (84), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L + +L D I + +VVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILSEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D RE S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAAREAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|B1JUY7|KDSA_BURCC 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia
cenocepacia (strain MC0-3) GN=kdsA PE=3 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L + +L D I + +VVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILGEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D RE S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAAREAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|A4JFY6|KDSA_BURVG 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia
vietnamiensis (strain G4 / LMG 22486) GN=kdsA PE=3 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L + +L D I + +VVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILGEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D RE S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAAREAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|Q8DRA5|DPO3_STRR6 DNA polymerase III PolC-type OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=polC PE=3 SV=1
Length = 1463
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 379 ARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIP 438
+ L QS A SEG + KSL ++ +V+ E ++ + E I E+F + +P
Sbjct: 86 SNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAEGNQL--FIEGSEAIDKEHFKKNHLP 143
Query: 439 ELIRSLEDLGAPEFN 453
L + LE G P FN
Sbjct: 144 NLAKQLEKFGFPTFN 158
>sp|Q04MH6|DPO3_STRP2 DNA polymerase III PolC-type OS=Streptococcus pneumoniae serotype 2
(strain D39 / NCTC 7466) GN=polC PE=3 SV=1
Length = 1463
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 379 ARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIP 438
+ L QS A SEG + KSL ++ +V+ E ++ + E I E+F + +P
Sbjct: 86 SNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAEGNQL--FIEGSEAIDKEHFKKNHLP 143
Query: 439 ELIRSLEDLGAPEFN 453
L + LE G P FN
Sbjct: 144 NLAKQLEKFGFPTFN 158
>sp|B3R497|KDSA_CUPTR 2-dehydro-3-deoxyphosphooctonate aldolase OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=kdsA PE=3 SV=1
Length = 289
Score = 36.2 bits (82), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 21/146 (14%)
Query: 197 GFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQ 255
G IL ++ V +L D +I + AVVD + PAFL R + A ++ + +
Sbjct: 72 GLEILAHVKREIGVPVLTDIHEIDEIKPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPVN 131
Query: 256 TAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGV 315
+ +L APH ++ V K D RE D F AC E GV
Sbjct: 132 IKKGQFL-APHD---------------MKNVIDKARDAAREAGLPDDVFMAC----ERGV 171
Query: 316 SFFHHEVVKRALVLAMEIRTAEPLIL 341
SF ++ +V LA+ T P++
Sbjct: 172 SFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|Q97SQ2|DPO3_STRPN DNA polymerase III PolC-type OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=polC PE=3 SV=1
Length = 1463
Score = 36.2 bits (82), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 379 ARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIP 438
+ L QS A SEG + KSL ++ +V+ E ++ + E I E+F + +P
Sbjct: 86 SNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAEGNQL--FIEGSEAIDKEHFKKNHLP 143
Query: 439 ELIRSLEDLGAPEFN 453
L + LE G P FN
Sbjct: 144 NLAKQLEKFGFPTFN 158
>sp|B2JIX1|KDSA_BURP8 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia phymatum
(strain DSM 17167 / STM815) GN=kdsA PE=3 SV=1
Length = 284
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 226 AVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEE 285
+VVD + PAFL R + A ++ + + + +L APH ++
Sbjct: 102 SVVDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFL-APH---------------DMKN 145
Query: 286 VKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPLIL 341
V K D RE S D F AC E GVSF ++ +V LA+ T P++
Sbjct: 146 VIDKARDAAREAGLSEDRFMAC----ERGVSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|Q0KCE4|KDSA_CUPNH 2-dehydro-3-deoxyphosphooctonate aldolase OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=kdsA PE=3 SV=1
Length = 289
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 20/116 (17%)
Query: 226 AVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEE 285
AVVD + PAFL R + A ++ + + + +L APH ++
Sbjct: 102 AVVDVLQTPAFLCRQTDFIRACAQSGKPVNIKKGQFL-APHD---------------MKN 145
Query: 286 VKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPLIL 341
V K D RE D F AC E GVSF ++ +V LA+ T P++
Sbjct: 146 VIDKARDAAREAGLPDDVFMAC----ERGVSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|Q13X06|KDSA_BURXL 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia
xenovorans (strain LB400) GN=kdsA PE=3 SV=1
Length = 284
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 226 AVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEE 285
+VVD + PAFL R + A ++ + + + +L APH ++
Sbjct: 102 SVVDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFL-APH---------------DMKN 145
Query: 286 VKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPLIL 341
V K D RE S D F AC E GVSF ++ +V LA+ T P++
Sbjct: 146 VIDKARDAAREAGLSEDRFMAC----ERGVSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|Q5YS64|RRF_NOCFA Ribosome-recycling factor OS=Nocardia farcinica (strain IFM 10152)
GN=frr PE=3 SV=1
Length = 185
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 20 TQNAEVLSSSPKSPTSLLSEHYLKVPAGGKAPNVGIAVRHVRRSHSGKLVRVKKDGAGGK 79
T N ++L + T +K A GK + +A+R+VRR +L R++KDG G+
Sbjct: 92 TNNGDILRITIPQLTEERRRELVK-QAKGKGEDAKVAIRNVRRKAMDELARIQKDGEAGE 150
Query: 80 GTWGKLLDTDVESHIDRNDPNYDS 103
G+ E +D+ Y S
Sbjct: 151 DEVGR-----AEKELDKTTAKYVS 169
>sp|P42339|PI3K_ARATH Phosphatidylinositol 3-kinase VPS34 OS=Arabidopsis thaliana
GN=At1g60490 PE=2 SV=2
Length = 814
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 516 ELALFLARAVIDDVLAPLNLEEISS----KLPP--NCSGSETVRVAR---SLIAARHAGE 566
+LA L R +ID L P N+E S K PP SG E + + SL++ + A
Sbjct: 263 KLARSLDRGIIDRDLKPSNIERKSIQRVLKYPPTRTLSGDERQLLWKFRFSLMSEKRALT 322
Query: 567 RLLRCWGGGTGWA-VEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALV 625
+ LRC W+ V++AK I +L+ ++E + + C + +L P F E V+ V
Sbjct: 323 KFLRC----VEWSDVQEAKQAI-QLMYKWE----MIDVCDAL-ELLSPLFESEEVRAYAV 372
Query: 626 MAMEKKNDRMLD--LLQ 640
+E+ +D L LLQ
Sbjct: 373 SVLERADDEELQCYLLQ 389
>sp|A0K8N2|KDSA_BURCH 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia
cenocepacia (strain HI2424) GN=kdsA PE=3 SV=1
Length = 284
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L + +L D I + +VVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILGEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|Q1BHS1|KDSA_BURCA 2-dehydro-3-deoxyphosphooctonate aldolase OS=Burkholderia
cenocepacia (strain AU 1054) GN=kdsA PE=3 SV=1
Length = 284
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 196 DGFVILLESADDLAVDIL-DAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKGFQVI 254
+G IL E L + +L D I + +VVD + PAFL R + A ++ + +
Sbjct: 71 EGLRILGEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPV 130
Query: 255 QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELG 314
+ +L APH ++ V K D R+ S D F AC E G
Sbjct: 131 NIKKGQFL-APHD---------------MKNVIDKARDAARDAGLSEDRFMAC----ERG 170
Query: 315 VSFFHHEVVKRALVLAMEIRTAEPLIL 341
VSF ++ +V LA+ T P++
Sbjct: 171 VSFGYNNLVSDMRSLAIMRETNAPVVF 197
>sp|Q473G6|KDSA_CUPPJ 2-dehydro-3-deoxyphosphooctonate aldolase OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=kdsA PE=3
SV=1
Length = 289
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 20/116 (17%)
Query: 226 AVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEE 285
AVVD + PAFL R + A ++ + + + +L APH ++
Sbjct: 102 AVVDVLQTPAFLCRQTDFIRACAQSGKPVNIKKGQFL-APHD---------------MKN 145
Query: 286 VKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPLIL 341
V K D R+ D F AC E GVSF ++ +V LA+ T P++
Sbjct: 146 VIDKARDAARDAGLPDDVFMAC----ERGVSFGYNNLVSDMRSLAIMRETGAPVVF 197
>sp|Q06826|BMP4_RAT Bone morphogenetic protein 4 OS=Rattus norvegicus GN=Bmp4 PE=2 SV=1
Length = 408
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 49 KAPNVGIAVR----HVRRSHSGKLVRVKKDGAGGKGTWGKL 85
K PN G+A+ H R+H G+ VR+ + G G W +L
Sbjct: 229 KQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGNWAQL 269
>sp|P12644|BMP4_HUMAN Bone morphogenetic protein 4 OS=Homo sapiens GN=BMP4 PE=1 SV=1
Length = 408
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 49 KAPNVGIAVR----HVRRSHSGKLVRVKKDGAGGKGTWGKL 85
K PN G+A+ H R+H G+ VR+ + G G W +L
Sbjct: 228 KQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGNWAQL 268
>sp|B1MDE3|RRF_MYCA9 Ribosome-recycling factor OS=Mycobacterium abscessus (strain ATCC
19977 / DSM 44196) GN=frr PE=3 SV=1
Length = 185
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 46 AGGKAPNVGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDVESHIDRNDPNY 101
A GK + + +R++RR + +L R+KKDG G+ G+ E +D+ Y
Sbjct: 117 AKGKGEDAKVTLRNIRRKANDELNRIKKDGEAGEDEVGR-----AEKDLDKTTAQY 167
>sp|Q92L31|THIQ_RHIME Thiamine import ATP-binding protein ThiQ OS=Rhizobium meliloti
(strain 1021) GN=thiQ PE=3 SV=1
Length = 238
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 511 LDASNELALFLARAVIDDVLAPLNLEEISSKLPPNCSGSETVRVARSLIAARH 563
LDA+N R ++D LA + L +LPP SG E RVA + RH
Sbjct: 106 LDAAN-------RTKVEDALARVGLAGFGKRLPPTLSGGERQRVALARAFVRH 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,992,147
Number of Sequences: 539616
Number of extensions: 11143115
Number of successful extensions: 38081
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 37833
Number of HSP's gapped (non-prelim): 187
length of query: 710
length of database: 191,569,459
effective HSP length: 125
effective length of query: 585
effective length of database: 124,117,459
effective search space: 72608713515
effective search space used: 72608713515
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)