Query 005169
Match_columns 710
No_of_seqs 175 out of 558
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 19:11:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005169.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005169hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1172 Na+-independent Cl/HCO 100.0 7E-167 2E-171 1411.9 38.9 519 2-611 330-865 (876)
2 TIGR00834 ae anion exchange pr 100.0 2E-157 3E-162 1362.9 38.2 510 2-605 339-882 (900)
3 PF00955 HCO3_cotransp: HCO3- 100.0 3E-142 8E-147 1183.0 1.5 457 1-551 2-510 (510)
4 COG0659 SUL1 Sulfate permease 99.3 3.4E-10 7.5E-15 129.5 22.3 327 45-508 32-365 (554)
5 TIGR00815 sulP high affinity s 99.2 3.3E-09 7.2E-14 121.5 23.5 325 48-508 28-375 (563)
6 PRK11660 putative transporter; 99.1 9.2E-09 2E-13 118.1 21.1 324 48-505 43-393 (568)
7 TIGR03173 pbuX xanthine permea 98.1 0.00013 2.8E-09 80.8 19.3 266 40-355 5-278 (406)
8 TIGR00801 ncs2 uracil-xanthine 98.1 0.00029 6.3E-09 78.5 21.7 266 40-354 15-293 (415)
9 KOG0236 Sulfate/bicarbonate/ox 98.1 0.00041 9E-09 81.8 22.7 326 51-503 98-439 (665)
10 PF00916 Sulfate_transp: Sulfa 97.9 6.4E-05 1.4E-09 78.2 10.2 123 294-514 146-269 (280)
11 PRK11412 putative uracil/xanth 97.7 0.0067 1.5E-07 68.5 22.2 271 40-354 18-299 (433)
12 TIGR03616 RutG pyrimidine util 97.3 0.02 4.3E-07 64.5 20.9 253 40-354 40-304 (429)
13 PRK10720 uracil transporter; P 97.2 0.049 1.1E-06 61.4 22.3 253 40-354 24-284 (428)
14 PF00860 Xan_ur_permease: Perm 97.2 0.011 2.3E-07 65.4 15.9 269 41-354 12-291 (389)
15 COG2233 UraA Xanthine/uracil p 96.1 0.4 8.6E-06 54.7 18.9 269 40-354 26-304 (451)
16 PF13792 Sulfate_tra_GLY: Sulf 48.4 11 0.00023 33.8 1.6 50 48-103 30-80 (84)
17 KOG3817 Uncharacterized conser 39.4 24 0.00051 39.7 2.9 67 542-611 252-329 (452)
18 PF12075 KN_motif: KN motif; 28.4 23 0.0005 27.8 0.4 18 325-342 3-20 (39)
19 PF13172 PepSY_TM_1: PepSY-ass 23.7 97 0.0021 22.9 3.0 25 121-145 5-29 (34)
20 TIGR00843 benE benzoate transp 21.1 2.7E+02 0.0058 31.9 7.2 101 66-180 254-354 (395)
21 COG2252 Xanthine/uracil/vitami 20.0 1.4E+03 0.031 26.6 17.2 93 69-171 56-155 (436)
No 1
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-167 Score=1411.90 Aligned_cols=519 Identities=42% Similarity=0.749 Sum_probs=487.3
Q ss_pred CCCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHH
Q 005169 2 EETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGII 81 (710)
Q Consensus 2 ~~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Gii 81 (710)
.+|+++|||+++|+|||+|||+|||+||+| .||+|+++||||||++||||||++|+++|||.+||+|+|+|||+||++
T Consensus 330 ~~tgrlFgGl~~DikrR~p~Y~SD~~Da~~--~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~Gii 407 (876)
T KOG1172|consen 330 QRTGRLFGGLVLDIKRRLPHYKSDFRDAFN--IQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGII 407 (876)
T ss_pred ccccccchhHHHHHHhhcCCChHHHHHHhc--cccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999 689999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeeccchhHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHhccccccccccccchhHHHH
Q 005169 82 HSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGL 161 (710)
Q Consensus 82 fslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRfTeEiF~~ 161 (710)
||+||||||+|+|+|||++|||+++|+||++++. +||+||+|||+|++++|+++|++|||.+|+|+||||||+||+
T Consensus 408 fslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~----dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~ 483 (876)
T KOG1172|consen 408 FSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL----DYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGL 483 (876)
T ss_pred HHHhcCCceEEEecCccHHHHHHHHHHHHhhCCC----chhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999999999999983 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhcccCCC-----------------CCCCcccccccccchhHHHHHHHHHHHHHHHHhhcccccc
Q 005169 162 LIAMLFMQQAIKGLVEEFRIPER-----------------ENPKLVQFIPSWRFANGMFALVLSFGLLYTGLKSRKARSW 224 (710)
Q Consensus 162 LIsviFi~eaik~l~~~F~~p~~-----------------~~~~~~~~~~~~~~~~~llsliL~~Gt~~~a~~lr~~rss 224 (710)
|||+|||||||++++++|+.... ++.....++..|.++|+++|++|++||+++|+++|+||+|
T Consensus 484 LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s 563 (876)
T KOG1172|consen 484 LISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSS 563 (876)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998875322 2223345677889999999999999999999999999999
Q ss_pred ccccccccccccchhhHHHHHHhhhcccccCcccCCCCCcccCCCCCCCCCCCCCceEecCCCCccHHHHHHHHHHHHHH
Q 005169 225 RYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMI 304 (710)
Q Consensus 225 ~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~~vP~~~~~rl~~p~~~~p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll 304 (710)
+||++|+|++|+|||+|+||++|++++|+.+...+.+++.+...|.+|.+. |||+|. +++++|+|++++|++||+|+
T Consensus 564 ~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp~~~~~t~~~~--rgw~v~-~~~~~P~~~~~~A~ipalll 640 (876)
T KOG1172|consen 564 RYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVPSVFPPTWPFD--RGWFVP-PFGKNPWWYVFAALIPALLL 640 (876)
T ss_pred CccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccCcCCCCCCccc--CCeeeC-CCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999754555677677777777554 999985 55599999999999999999
Q ss_pred HhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhccCCCCCCCCCCCChhhhhhHHHHHHHhhhhhhhhhh
Q 005169 305 AVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATA 384 (710)
Q Consensus 305 ~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgllGLPw~nga~PqSp~Ht~SLav~~~~~~r~~~v~~a 384 (710)
+||||||||||++|+||||||||||+|||||||+||++|++||+|||||+|||+||||+|++||+++++
T Consensus 641 ~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~----------- 709 (876)
T KOG1172|consen 641 TILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESE----------- 709 (876)
T ss_pred HHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhc-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred hhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhhhhhhhhhcccCCCCCCCCccccccccccccccCcceeee
Q 005169 385 RTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKELKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKE 464 (710)
Q Consensus 385 ~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~g~~~aP~~~~~fd~e~~i~~~l~v~V~E 464 (710)
..|||++++ |++|+|
T Consensus 710 ------------------------------------------------------~~apge~~~-----------i~~V~E 724 (876)
T KOG1172|consen 710 ------------------------------------------------------TSAPGEQPQ-----------IVGVRE 724 (876)
T ss_pred ------------------------------------------------------ccCCCCccc-----------cccchh
Confidence 135676644 479999
Q ss_pred echhhHHHHHHHHHHhhcccccccccchhhhhHHHHhhcccCCCchhHHHHHhhhcCCCCccccccccccccccccCccc
Q 005169 465 QRLSNLLQAIMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEEYHATFVETVPFKT 544 (710)
Q Consensus 465 QRvS~ll~~lLig~sv~~~pvL~~IP~aVL~GvFlYMGi~SL~GnQf~eRilLlf~~p~~ry~~~~~~~~~yvr~VP~~~ 544 (710)
|||||++|++|||+|++++|+|+.||+|||||||+|||++||+|||||||++|+|||+||| |+.+|+||||+|+
T Consensus 725 QRvtgll~~llvgls~~~~pvL~~IP~~VL~GvFlYMgv~SL~Gnqf~eRl~Llf~p~k~~------p~~~ylrhv~~r~ 798 (876)
T KOG1172|consen 725 QRVTGLLQFLLVGLSVLLLPVLKLIPMPVLYGVFLYMGVSSLPGNQFFERLLLLFMPPKHR------PDTLYLRHVPFRR 798 (876)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhhccCCccHHHHHHHHHcCCcccC------CCccceeecchhh
Confidence 9999999999999999999999999999999999999999999999999999999999874 6779999999999
Q ss_pred hhhHHHHHHHHHHHhheeeechhhhhhHHHHHHHHHHHhhhhcCCCCChhhhcccCcccccccCCCC
Q 005169 545 IAMFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPARQYILPKFFKGVHLQDLDAAEYEEAPALP 611 (710)
Q Consensus 545 IhlFT~iQl~~l~~~f~vt~i~~aai~FPl~i~lLIpiR~~lLpk~F~~~eL~~LD~~e~ee~~~~~ 611 (710)
||+||++|++||++||||+|++.|+|+||++++++||+|+++|||+|+++||++||++|+|+++..+
T Consensus 799 vhlFT~~Ql~~l~ll~~i~~~~~asi~FP~~ll~lVpiR~~~lp~~f~~~eL~~LD~~~~~~~~~~~ 865 (876)
T KOG1172|consen 799 VHLFTLIQLLCLALLWAIKWSPVASIIFPLMLLLLVPIRQYLLPRLFKPRELQALDANEYEPEPDKP 865 (876)
T ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHhHHhhcCHHhhhhhchhhcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999887
No 2
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=100.00 E-value=1.5e-157 Score=1362.93 Aligned_cols=510 Identities=27% Similarity=0.511 Sum_probs=467.8
Q ss_pred CCCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHH
Q 005169 2 EETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGII 81 (710)
Q Consensus 2 ~~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Gii 81 (710)
++|++|||||++|+|||+|||+|||+|||| +||+|+++||||||++||||||++|+++|+|.|||+|+|+|||+||++
T Consensus 339 ~rtg~~f~Gli~DikRR~p~Y~SD~tDa~~--~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Gii 416 (900)
T TIGR00834 339 QRTGRPFGGLIRDIKRRYPHYLSDFTDALN--PQCLAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVL 416 (900)
T ss_pred hhcCCccchHHHHHHhhcccchHHHhhhhc--chhHHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999 699999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeeccchhHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHhccccccccccccchhHHHH
Q 005169 82 HSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGL 161 (710)
Q Consensus 82 fslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRfTeEiF~~ 161 (710)
||+||||||+|+|+|||+++|++++|+||++++ .+|++||+|||+|+++||+++|++|+|++|+|+||||||+|++
T Consensus 417 fslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~----~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~ 492 (900)
T TIGR00834 417 FALLAAQPLLVVGFSGPLLVFEEAFFSFCESNG----LEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSF 492 (900)
T ss_pred HhhhcCCceEEecCcccHHHHHHHHHHHHhhcC----CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999999987 3899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhcccCCC--------------CCCC---------------cccccccccchhHHHHHHHHHHHH
Q 005169 162 LIAMLFMQQAIKGLVEEFRIPER--------------ENPK---------------LVQFIPSWRFANGMFALVLSFGLL 212 (710)
Q Consensus 162 LIsviFi~eaik~l~~~F~~p~~--------------~~~~---------------~~~~~~~~~~~~~llsliL~~Gt~ 212 (710)
|||+||||||+++++++|+.+.. .|.+ ....+..|.++++++|++|++|||
T Consensus 493 lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf 572 (900)
T TIGR00834 493 LISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTF 572 (900)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999985220 0000 011223455789999999999999
Q ss_pred HHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCcccCCCCCcccCCCCCCCCCCC--CCceEecCCCCc-
Q 005169 213 YTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPNPWSPGAY--ENWTVIKDMLNV- 289 (710)
Q Consensus 213 ~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~~vP~~~~~rl~~p~~~~p~~~--r~W~V~~~~~~v- 289 (710)
++|+++++||+|+||++++|++|+|||+||+|++|++++|.++ ++. .+++..|..+.|++. |+|+| .+++..
T Consensus 573 ~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~-~v~---~~kl~Vp~~f~pt~p~~R~W~i-~p~~~~~ 647 (900)
T TIGR00834 573 FLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIG-DTY---TQKLSVPSGLKVTNPSARGWFI-PPLGENR 647 (900)
T ss_pred HHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhc-cCc---ccccCCCCCcCCCCCCCCCeEE-ccccccc
Confidence 9999999999999999999999999999999999999999764 232 235667777777765 89997 456554
Q ss_pred --cHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhccCCCCCCCCCCCChhhhhh
Q 005169 290 --PIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKS 367 (710)
Q Consensus 290 --P~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgllGLPw~nga~PqSp~Ht~S 367 (710)
|+|++++|++||++++||||||||||++|+|+||||||||+||||||+++|++|++||+|||||+||++||||+|++|
T Consensus 648 ~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~s 727 (900)
T TIGR00834 648 PFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANA 727 (900)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhhhhhhhhhcccCCCCCCCCcccc
Q 005169 368 LATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKELKESTIQAASCTGNLNAPVDETL 447 (710)
Q Consensus 368 Lav~~~~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~g~~~aP~~~~~ 447 (710)
|+++++. .+||++++
T Consensus 728 L~v~~~~-----------------------------------------------------------------~~~Ge~~~ 742 (900)
T TIGR00834 728 LTVMSKA-----------------------------------------------------------------SAPGEKAQ 742 (900)
T ss_pred Heeeeec-----------------------------------------------------------------cCCCCCCc
Confidence 9875431 24555433
Q ss_pred ccccccccccCcceeeeechhhHHHHHHHHHHhhcccccccccchhhhhHHHHhhcccCCCchhHHHHHhhhcCCCCccc
Q 005169 448 FDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYK 527 (710)
Q Consensus 448 fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~~~pvL~~IP~aVL~GvFlYMGi~SL~GnQf~eRilLlf~~p~~ry~ 527 (710)
+++|+||||||+++|+|||+|+++.|+|++||+|||||+|+|||++||+|||||+|++|+|||+|++
T Consensus 743 -----------i~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aVL~GvFlYMGv~SL~GnQ~~~Ri~llf~p~k~~-- 809 (900)
T TIGR00834 743 -----------IQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVLFGIFLYMGVTSLSGIQLFDRLLLLLMPPKYH-- 809 (900)
T ss_pred -----------cceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhcccCHHHHHHHHHhcCcccC--
Confidence 3799999999999999999999999999999999999999999999999999999999999998863
Q ss_pred cccccccccccccCccchhhHHHHHHHHHHHhheeeechhhhhhHHHHHHHHHHHhhhhcCCCCChhhhcccCccccc
Q 005169 528 VLEEYHATFVETVPFKTIAMFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPARQYILPKFFKGVHLQDLDAAEYE 605 (710)
Q Consensus 528 ~~~~~~~~yvr~VP~~~IhlFT~iQl~~l~~~f~vt~i~~aai~FPl~i~lLIpiR~~lLpk~F~~~eL~~LD~~e~e 605 (710)
|+.+|+|+||+||||+||++|++|++++|+|+| ++++|+||++|++|||+|++++||+|+++||++||++|.|
T Consensus 810 ----P~~~ylr~Vp~~kihlFT~iQl~cl~~l~~ik~-t~aai~FP~~iillVpiR~~llp~~F~~~eL~~LD~~d~~ 882 (900)
T TIGR00834 810 ----PDVPYVRRVKTWRMHLFTAIQILCLALLWVVKS-TPASLAFPFVLILTVPLRRLLLPRLFTERELKCLDKEDAK 882 (900)
T ss_pred ----CCchhhhcCChhHHHHHHHHHHHHHHHHHHHHH-HhHHHHhHHHHHHHHHHHHHHHhhcCCHHHHhhhCccccc
Confidence 788999999999999999999999999999998 5799999999999999999999999999999999988775
No 3
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=100.00 E-value=3.5e-142 Score=1183.02 Aligned_cols=457 Identities=36% Similarity=0.688 Sum_probs=67.2
Q ss_pred CCCCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHH
Q 005169 1 MEETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGI 80 (710)
Q Consensus 1 ~~~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Gi 80 (710)
.+|||+||||+++|+|||+|||+|||+||+| .||+++++||||||++||||||++|+++|+|.+|++|+|+|||+||+
T Consensus 2 l~rtg~~fgGl~~Dikrr~p~Y~SD~~D~~~--~~~~~~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi 79 (510)
T PF00955_consen 2 LQRTGRLFGGLINDIKRRLPWYWSDFTDGLN--LQCLAATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGI 79 (510)
T ss_dssp -------------------STTCHHHCCSS---SHHHHHHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHH
T ss_pred Ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3799999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcceeeeeccchhHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHhccccccccccccchhHHH
Q 005169 81 IHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFG 160 (710)
Q Consensus 81 ifslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRfTeEiF~ 160 (710)
+||+||||||+|+|+|||+++|++++|+||++++ .||++||+|||+|++++|+++|++|+|.+|+|+||||||+|+
T Consensus 80 ~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~----~~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~ 155 (510)
T PF00955_consen 80 IFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYG----LDFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFA 155 (510)
T ss_dssp HHHHCC--------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999987 389999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhcccCCC---------------CCCCc---------c--------------------------
Q 005169 161 LLIAMLFMQQAIKGLVEEFRIPER---------------ENPKL---------V-------------------------- 190 (710)
Q Consensus 161 ~LIsviFi~eaik~l~~~F~~p~~---------------~~~~~---------~-------------------------- 190 (710)
+|||+|||+||+|+++++|+.... ++++. .
T Consensus 156 ~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c 235 (510)
T PF00955_consen 156 LLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSC 235 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999998874200 00000 0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCcccCCCCCcccCCCC
Q 005169 191 QFIPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPN 270 (710)
Q Consensus 191 ~~~~~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~~vP~~~~~rl~~p~ 270 (710)
..+..+.++++++|++|++||+++|+++++||+|+||++++|++|+|||+||+|++|++++|+.+.++| ++..|+
T Consensus 236 ~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~~~~-----kL~vp~ 310 (510)
T PF00955_consen 236 DDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYLFGVDTP-----KLNVPS 310 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhccccc-----ccCCCC
Confidence 001234566789999999999999999999999999999999999999999999999999988765444 356677
Q ss_pred CCCCCCC--CCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhc
Q 005169 271 PWSPGAY--ENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGL 348 (710)
Q Consensus 271 ~~~p~~~--r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgl 348 (710)
.++|+.. |+|+| .+++++|+|++++|++||+++++|||||||||++|+|+||||||||+||||||+++|++|++||+
T Consensus 311 ~f~pt~~~~r~W~v-~p~~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sl 389 (510)
T PF00955_consen 311 SFKPTSPGKRGWFV-NPFGSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSL 389 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCeec-CcccCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHH
Confidence 7777654 89997 57889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCChhhhhhHHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhhhhh
Q 005169 349 IGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKELKES 428 (710)
Q Consensus 349 lGLPw~nga~PqSp~Ht~SLav~~~~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~ 428 (710)
+||||+||++||||+|++||+++++.
T Consensus 390 lGLPw~~aa~~~S~~Hv~sL~~~~~~------------------------------------------------------ 415 (510)
T PF00955_consen 390 LGLPWMNAATPQSPMHVRSLAVESET------------------------------------------------------ 415 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCcccCccCCHHHhCcccEEecc------------------------------------------------------
Confidence 99999999999999999999875541
Q ss_pred hhhhcccCCCCCCCCccccccccccccccCcceeeeechhhHHHHHHHHHHhhcccccccccchhhhhHHHHhhcccCCC
Q 005169 429 TIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPG 508 (710)
Q Consensus 429 ~~~~~~~~g~~~aP~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~~~pvL~~IP~aVL~GvFlYMGi~SL~G 508 (710)
.||||++++ ++|+||||||+++|+|||+|+++.|+|++||+|||+|+|+|||++||+|
T Consensus 416 -----------~~pGe~~~i-----------~~V~EqRvT~l~~~~Ligls~~l~pvL~~IP~~VL~GvFlymG~~sL~g 473 (510)
T PF00955_consen 416 -----------SAPGEKPKI-----------VGVREQRVTGLLVHLLIGLSLFLLPVLKLIPMPVLYGVFLYMGVTSLSG 473 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------ccCCCCCee-----------CeEEEecccHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhheeeeecC
Confidence 256665333 6999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhhhcCCCCccccccccccccccccCccchhhHHHH
Q 005169 509 NQFWERILLLFTAPSRRYKVLEEYHATFVETVPFKTIAMFTIF 551 (710)
Q Consensus 509 nQf~eRilLlf~~p~~ry~~~~~~~~~yvr~VP~~~IhlFT~i 551 (710)
||||||++|+|||+|+ +|+.+|+|+||+||||+||+|
T Consensus 474 nq~~~Ri~ll~~~~k~------~P~~~ylr~Vp~~~ihlfT~I 510 (510)
T PF00955_consen 474 NQFFERILLLFMPPKH------YPDTHYLRRVPQRKIHLFTLI 510 (510)
T ss_dssp ---TTTT------SS---------------TTHHHHHT-----
T ss_pred ccHHHHHHHHccCccc------ccCCHHHCcCCCCeEEEEEeC
Confidence 9999999999999876 377899999999999999986
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.27 E-value=3.4e-10 Score=129.54 Aligned_cols=327 Identities=19% Similarity=0.226 Sum_probs=219.9
Q ss_pred Hhhhhh-HHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHH-HHHHHHHHHhhhcccccccch
Q 005169 45 FASAIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVI-MYTFMFNFAKERADLGRNLFI 122 (710)
Q Consensus 45 FA~llP-aIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~i-f~~~ly~f~~~~~~lg~~~fL 122 (710)
.+.++| +++|+..-+ .+..--|-++.++|++|++|||-|..|.|.||++.+ ....+.+.. .+ ++
T Consensus 32 a~valP~ama~a~~aG------v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~-~~-------g~ 97 (554)
T COG0659 32 AAVALPLAMAFAIAAG------VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLV-ET-------GL 97 (554)
T ss_pred HHHHhHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHH-HH-------HH
Confidence 445679 999988433 667788999999999999999999999999999654 333344444 32 45
Q ss_pred hHHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCccccccccc--chh
Q 005169 123 AWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSWR--FAN 200 (710)
Q Consensus 123 ~~~~WVgiWta~~l~llai~nas~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~~~~--~~~ 200 (710)
...+-..+-++++++++..+-..++++|+.|--=--|-.=|+++-+..-++.+.. .+...+.........++ ...
T Consensus 98 ~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G---~~~~~~~~~~~~~~l~~~~~~~ 174 (554)
T COG0659 98 ALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLG---LASKVSGFWAKVSALFTVLLTI 174 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcC---CCccccchHHHHHHHHHhcccc
Confidence 5666788999999999999999999999998666666666777777776766643 21111110000000000 011
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCcccC-CC-CCcccCCCCCCCCCCCC
Q 005169 201 GMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVP-KG-IPRRLFSPNPWSPGAYE 278 (710)
Q Consensus 201 ~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~~vP-~~-~~~rl~~p~~~~p~~~r 278 (710)
...++++...++.+-+.+++.. +..|+ ..+++++.|.+++.++.+.+ .| ++..+..+.|
T Consensus 175 ~~~~~~lg~~~l~il~~~~~~~--~~~P~----------~liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~~~------- 235 (554)
T COG0659 175 NLATLLLGLLTLAILLFLPRLT--PRIPS----------PLIALVLGTLIVWIFPLDSLRYGEIPGSLPSGLP------- 235 (554)
T ss_pred cHHHHHHHHHHHHHHHHccchh--hhCCc----------HHHHHHHHHHHHHHhcCCchhcccCcccCCcCCC-------
Confidence 1334555555555555555444 33333 57899999999988876653 22 3333333222
Q ss_pred CceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhccCCCCCCCCC
Q 005169 279 NWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVI 358 (710)
Q Consensus 279 ~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgllGLPw~nga~ 358 (710)
+|- ..+++...+..-+.+|+.++++-+.|+=.|+.......+. ..--+=+|.-.|+.|+++|++|==|.+|++
T Consensus 236 ~~~----~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~---~~d~nrELiaqGiaNi~sglfgg~p~~g~~ 308 (554)
T COG0659 236 HFR----LPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT---KHDSNRELIAQGIANIASGLFGGIPATGSI 308 (554)
T ss_pred ccc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHHHhhHHHHHHHHhCCccccchh
Confidence 222 2335555566666779999999999999999888765433 233356799999999999999944456655
Q ss_pred CCChhhhhhHHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhhhhhhhhhcccCCC
Q 005169 359 PQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKELKESTIQAASCTGN 438 (710)
Q Consensus 359 PqSp~Ht~SLav~~~~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~g~ 438 (710)
.||.+-.+ .+|
T Consensus 309 srS~~nv~--------------------------------------------------------------------sGa- 319 (554)
T COG0659 309 SRSAINIK--------------------------------------------------------------------SGA- 319 (554)
T ss_pred HHHHHHHH--------------------------------------------------------------------hCC-
Confidence 44432211 112
Q ss_pred CCCCCccccccccccccccCcceeeeechhhHHHHHHHHHHhh-cccccccccchhhhhHHHHhhcccCCC
Q 005169 439 LNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVA-AMPFLKMIPTSVLWGYFAFMAIESLPG 508 (710)
Q Consensus 439 ~~aP~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~-~~pvL~~IP~aVL~GvFlYMGi~SL~G 508 (710)
-+|+|+++.++++.+.++ +.|++.+||+++|.|+-.+.|++-+.-
T Consensus 320 -------------------------rT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laavli~v~~~l~~~ 365 (554)
T COG0659 320 -------------------------RTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAVLILVGWGLLDW 365 (554)
T ss_pred -------------------------cChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhccH
Confidence 268999999988887754 578999999999999999999987765
No 5
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.17 E-value=3.3e-09 Score=121.49 Aligned_cols=325 Identities=16% Similarity=0.172 Sum_probs=203.4
Q ss_pred hhh-HHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHH-HHHHHhhhcccccccchhHH
Q 005169 48 AIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTF-MFNFAKERADLGRNLFIAWS 125 (710)
Q Consensus 48 llP-aIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~-ly~f~~~~~~lg~~~fL~~~ 125 (710)
.+| ++||+.+-+ +...--|.++.+.+++|++||+-|.+|.|+|+.+.++... +-++..+.+. ..++....
T Consensus 28 ~iP~~~ayA~lag------lpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~~--~~~~~~~a 99 (563)
T TIGR00815 28 LIPQAMAYAILAG------LSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQYLF--DCDAIRLA 99 (563)
T ss_pred HHHHHHHHHHHcC------CCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCCCCc--ccHHHHHH
Confidence 344 888886542 3344448899999999999999999999988876655433 2333332210 12578888
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccc--------c-ccc
Q 005169 126 GWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF--------I-PSW 196 (710)
Q Consensus 126 ~WVgiWta~~l~llai~nas~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~--------~-~~~ 196 (710)
.++++-++++++++..+....+++|+.+-.=.-|..=++++.+..-++.+...=..+...+. .... + ..|
T Consensus 100 ~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 178 (563)
T TIGR00815 100 FTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDT-LGVVISTWAGLPNTHNW 178 (563)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHHHHHhhhcccc
Confidence 89999999999999999999999999987777888888888888888888653110011110 0000 0 111
Q ss_pred cchhHHHHHHHHHHHHHHHHhhccccccccccccccccccc--hhhHHHHHHhhhcccccC---------cccCCCCCcc
Q 005169 197 RFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIAD--YGVPLMVVVWTGVSYIPS---------GDVPKGIPRR 265 (710)
Q Consensus 197 ~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaD--ygvpiaVl~~t~vsy~~~---------~~vP~~~~~r 265 (710)
. ..++++++.++.+-+..++.+ ++.|+.+.= -+..+++++-+.++++.. .++|.+.|
T Consensus 179 ~----~~~~~i~~~~~~~l~~~~~~~------~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~~~~~~~g~ip~g~p-- 246 (563)
T TIGR00815 179 N----WCTLVIGLVLLLFLLYTKKLG------KRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGHIPSGLS-- 246 (563)
T ss_pred c----hHHHHHHHHHHHHHHHHHHhh------hhccchhcccccHHHHHHHHHHHHHHHHccCCCCeEEEeecCCCCC--
Confidence 2 233344444443333333322 112221110 111233344443443321 12333321
Q ss_pred cCCCCCCCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhh
Q 005169 266 LFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLL 345 (710)
Q Consensus 266 l~~p~~~~p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~i 345 (710)
. |. .-.+.+..+...+..|+.++++-|+|+-.++.-..++.. +..-..-++..+|+.|++
T Consensus 247 ----~---------~~----~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~---~~~d~n~El~a~G~~N~~ 306 (563)
T TIGR00815 247 ----F---------FP----PITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTG---YKIDANQELVAQGIANIV 306 (563)
T ss_pred ----C---------CC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCcHHHHHhhHHHHH
Confidence 0 10 111222334556677999999999999888876655422 234456789999999999
Q ss_pred hhccCCCCCCCCCCCChhhhhhHHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhh
Q 005169 346 CGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKEL 425 (710)
Q Consensus 346 cgllGLPw~nga~PqSp~Ht~SLav~~~~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l 425 (710)
+|++|--|.++..-||....+
T Consensus 307 ~~~fg~~p~~~s~srs~~~~~----------------------------------------------------------- 327 (563)
T TIGR00815 307 GSFFSCYPATGSLSRTAVNAK----------------------------------------------------------- 327 (563)
T ss_pred HHHhCccCCCCcchHHHHHHh-----------------------------------------------------------
Confidence 999998887766543322110
Q ss_pred hhhhhhhcccCCCCCCCCccccccccccccccCcceeeeechhhHHHHHHHHHH-hhcccccccccchhhhhHHHHhhcc
Q 005169 426 KESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGC-VAAMPFLKMIPTSVLWGYFAFMAIE 504 (710)
Q Consensus 426 k~~~~~~~~~~g~~~aP~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~s-v~~~pvL~~IP~aVL~GvFlYMGi~ 504 (710)
.|. -+|+++++.++++.+. +++.|++..||++||.|+-++.|+.
T Consensus 328 ----------~G~-------------------------~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~ 372 (563)
T TIGR00815 328 ----------AGC-------------------------RTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRG 372 (563)
T ss_pred ----------cCC-------------------------cchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhc
Confidence 011 2588999998888776 4567999999999999999999998
Q ss_pred cCCC
Q 005169 505 SLPG 508 (710)
Q Consensus 505 SL~G 508 (710)
+..
T Consensus 373 -l~~ 375 (563)
T TIGR00815 373 -LID 375 (563)
T ss_pred -ccC
Confidence 553
No 6
>PRK11660 putative transporter; Provisional
Probab=99.06 E-value=9.2e-09 Score=118.08 Aligned_cols=324 Identities=15% Similarity=0.179 Sum_probs=193.6
Q ss_pred hhh-HHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHHHHHHHhhhcccccccchhHHH
Q 005169 48 AIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSG 126 (710)
Q Consensus 48 llP-aIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~ 126 (710)
.+| ++||+..-+ +..+--|.|+.+++++|++||+-|.++.|.|+.+.+.. ....++.+ +.-..
T Consensus 43 ~iPq~mayA~lag------~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~---~~~~~~~~-------~~~~~ 106 (568)
T PRK11660 43 AIPLAMALAIASG------VPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIL---YPVSQQFG-------LAGLL 106 (568)
T ss_pred HHHHHHHHHHHcC------CChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHH---HHHHHHhh-------HHHHH
Confidence 445 778874321 33344599999999999999999999998888776653 33344332 23345
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCccc---c---cccccchh
Q 005169 127 WVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQ---F---IPSWRFAN 200 (710)
Q Consensus 127 WVgiWta~~l~llai~nas~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~---~---~~~~~~~~ 200 (710)
+..+.++++.+++..++...+++++.+=.=.-|..=++++.+...++.+... +.+....+..+. . -.++..
T Consensus 107 ~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~-~~~~~~~~~~~~l~~~~~~l~~~~~-- 183 (568)
T PRK11660 107 VATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGL-QMAHVPEHYLEKVGALFQALPTINW-- 183 (568)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCccHHHHHHHHHHhhccCCH--
Confidence 6789999999999999999999999887777777777777777666666432 111000000000 0 011111
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCcc---c-----------CCC-----
Q 005169 201 GMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGD---V-----------PKG----- 261 (710)
Q Consensus 201 ~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~~---v-----------P~~----- 261 (710)
.++++++.++.+.+.+++++. ..+ +..++|++.+.++|..... + |++
T Consensus 184 --~~~~~~~~~l~lll~~~~~~~--~iP----------~~li~iiv~t~~~~~~~~~~~~v~~vg~~~~~~~~~g~~~~~ 249 (568)
T PRK11660 184 --GDALIGIVTLGVLILWPRLKI--RLP----------GHLPALLAGTAVMGVLNLLGGHVATIGSRFHYVLADGSQGNG 249 (568)
T ss_pred --HHHHHHHHHHHHHHHHHhhcc--cCc----------hHHHHHHHHHHHHHHHhccCCCceeecccccccccccccccC
Confidence 233333333333333333321 111 2245666666666443211 1 111
Q ss_pred CCcccCCCCCCCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHH
Q 005169 262 IPRRLFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGF 341 (710)
Q Consensus 262 ~~~rl~~p~~~~p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~ 341 (710)
+|..+ |....|....++ ..+..++++..+..-+..|+.++++-|.|.-.++.-..++. +|..-..-+|.-.|+
T Consensus 250 ip~~~--p~~~~p~~~~~~--~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~---~~~~d~n~EL~a~G~ 322 (568)
T PRK11660 250 IPPLL--PQFVLPWNLPGA--DGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMT---GTKHSANSELVGQGL 322 (568)
T ss_pred CCCCC--CCCCCCcccccc--ccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCcHHHHHHhH
Confidence 11111 111111000000 00123344444445556688888888988875554443322 233347889999999
Q ss_pred HhhhhhccCCCCCCCCCCCChhhhhhHHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhh
Q 005169 342 LTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQG 421 (710)
Q Consensus 342 ~t~icgllGLPw~nga~PqSp~Ht~SLav~~~~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 421 (710)
.|+++|++|-.+.++...||-+..
T Consensus 323 aNi~~~~fgg~p~~~s~srSa~n~-------------------------------------------------------- 346 (568)
T PRK11660 323 GNIVAPFFGGITATAAIARSAANV-------------------------------------------------------- 346 (568)
T ss_pred HHHHHHHhCcccccchHHHHHHHH--------------------------------------------------------
Confidence 999999999998766443331110
Q ss_pred hhhhhhhhhhhcccCCCCCCCCccccccccccccccCcceeeeechhhHHHHHHHHHHh-hcccccccccchhhhhHHHH
Q 005169 422 LKELKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCV-AAMPFLKMIPTSVLWGYFAF 500 (710)
Q Consensus 422 ~~~lk~~~~~~~~~~g~~~aP~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv-~~~pvL~~IP~aVL~GvFlY 500 (710)
+.|. -+|++++..++++.+.+ +..|++..||.+||.|+-.|
T Consensus 347 -------------~aGa-------------------------rT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~ 388 (568)
T PRK11660 347 -------------RAGA-------------------------TSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLM 388 (568)
T ss_pred -------------hcCC-------------------------CcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 0121 36899999999998885 67899999999999999999
Q ss_pred hhccc
Q 005169 501 MAIES 505 (710)
Q Consensus 501 MGi~S 505 (710)
.|+.-
T Consensus 389 ~~~~m 393 (568)
T PRK11660 389 VAWNM 393 (568)
T ss_pred HHHHh
Confidence 99864
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=98.14 E-value=0.00013 Score=80.77 Aligned_cols=266 Identities=15% Similarity=0.100 Sum_probs=140.0
Q ss_pred hHHHHHhhhhhHHHHhhccchhcC-CcchhhHHHHhhhHhHHHHH----HhcCcceeeeeccchhHHHHHHHHHHHhhhc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTE-GVLTAVQTLASTALCGIIHS----IIGGQPLLILGVAEPTVIMYTFMFNFAKERA 114 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~-g~lgv~E~Llstai~Giifs----lf~GQPL~IlGvTGP~~if~~~ly~f~~~~~ 114 (710)
.+++|-+++++.+-.+.-++-..+ -..-++-++++++++.++++ .+|+.--.+.|.+++... .++..+.+.
T Consensus 5 ~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~---~~~~~~~~~- 80 (406)
T TIGR03173 5 VLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVG---PMIAIGAGG- 80 (406)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHH---HHHHHhhhh-
Confidence 356777777776666543221111 12334678899999999997 667888888888885443 344444432
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccccc
Q 005169 115 DLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIP 194 (710)
Q Consensus 115 ~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~ 194 (710)
-++-..-..++++++.++++. =...+.|+++...--.+.++|++..+.-+++..... + ....+
T Consensus 81 ------~~~~~~ga~~v~Gii~illg~-~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~---~-----~~~~~-- 143 (406)
T TIGR03173 81 ------GLGAIFGAVIVAGLFVILLAP-FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGG---A-----GAPDF-- 143 (406)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccC---C-----Ccccc--
Confidence 234445677888888887772 223445555544444444566666666666554211 0 00000
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCc-ccCCCCCcc--cCCCCC
Q 005169 195 SWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRR--LFSPNP 271 (710)
Q Consensus 195 ~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~-~vP~~~~~r--l~~p~~ 271 (710)
.+..+- ++++.++.+.+..++ +.|+++.-+++.+++++-+.+++..+. +.+. +... ...|.|
T Consensus 144 -~~~~~~----~l~l~~l~~~il~~~---------~~~~~~~~~aiLi~ivvg~iva~~~g~~~~~~-i~~~~~~~~P~~ 208 (406)
T TIGR03173 144 -GSPQNL----GLALLTLVIILLLNR---------FGKGFLRSIAVLLGLVVGTIVAAALGMVDFSG-VAEAPWFALPTP 208 (406)
T ss_pred -cchHHH----HHHHHHHHHHHHHHH---------HhhhHHHHhHHHHHHHHHHHHHHHhcCCCchh-hccCCeeeCCCC
Confidence 011111 222222222222211 223455667999999998888765542 2211 1000 001111
Q ss_pred CCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhccCC
Q 005169 272 WSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGI 351 (710)
Q Consensus 272 ~~p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgllGL 351 (710)
+ .| ..|.. -+.++++.+.+++.-++|+-=+..-+.+...+-.+....+-.+..-|+-|.++|++|-
T Consensus 209 ~------~~-------~~P~f-~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~ 274 (406)
T TIGR03173 209 F------HF-------GAPTF-DLVAILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNT 274 (406)
T ss_pred C------cC-------CCCee-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCC
Confidence 1 11 11110 1223445555666667776544433333222111234566779999999999999998
Q ss_pred CCCC
Q 005169 352 PPSN 355 (710)
Q Consensus 352 Pw~n 355 (710)
++.+
T Consensus 275 ~p~t 278 (406)
T TIGR03173 275 FPYT 278 (406)
T ss_pred CCCc
Confidence 8754
No 8
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=98.12 E-value=0.00029 Score=78.50 Aligned_cols=266 Identities=15% Similarity=0.141 Sum_probs=151.0
Q ss_pred hHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcc---eeeeeccchhHHHHHHHHHHHhhhccc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQP---LLILGVAEPTVIMYTFMFNFAKERADL 116 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQP---L~IlGvTGP~~if~~~ly~f~~~~~~l 116 (710)
.+.+|-++++|.+..|..+-+.-|-..=++-+++.++++-+++++.++.| .++.|.+- .|-. +-.+.... .
T Consensus 15 ~l~~~~~~i~~p~iv~~~~l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sf---a~i~--~~~~~~~~-~ 88 (415)
T TIGR00801 15 LLAMFGGTVLVPLLVGLAPLSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSF---AFVS--PMIAIGSG-L 88 (415)
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcH---HHHH--HHHHHHhc-c
Confidence 45678888888888887763333334445678899999999999999999 66666642 1111 22222221 0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHh---ccc-cccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccc
Q 005169 117 GRNLFIAWSGWVCVWTALLLLMLSIL---GAC-SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF 192 (710)
Q Consensus 117 g~~~fL~~~~WVgiWta~~l~llai~---nas-~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~ 192 (710)
+ .+-..=..++++++.++++.+ ..- .+.|+|+.-.--...++|.+....-+++.+......| ...
T Consensus 89 ~----~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~-----~~~-- 157 (415)
T TIGR00801 89 G----IPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAM-----SSA-- 157 (415)
T ss_pred C----HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcc-----ccc--
Confidence 1 111112345556665666554 111 2356778878888888999888888988774322111 000
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCc-ccCCCCCcccCCCCC
Q 005169 193 IPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRRLFSPNP 271 (710)
Q Consensus 193 ~~~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~-~vP~~~~~rl~~p~~ 271 (710)
++. + .-.+++++.++.+.+..+ ++.|+++.-+++.+++++-+.+++..+. +.+. + ...|
T Consensus 158 --~~~--~-~~~~~vg~~~l~~~vl~~---------~~~~g~~~~~aiLigiv~g~i~a~~lg~~~~~~-v-----~~~~ 217 (415)
T TIGR00801 158 --TYG--S-LENLGVAFVVLALIILLN---------RFGKGFLKSISILIGILVGYILALFMGIVDFSP-V-----IDAP 217 (415)
T ss_pred --ccC--c-hhhHHHHHHHHHHHHHHH---------HHHhhHHHHHHHHHHHHHHHHHHHHcCCccchh-h-----ccCc
Confidence 010 1 112334444444333221 2234456677999999998888866542 2211 1 1112
Q ss_pred CCCCCCCCceEecC---C-CCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhhccc-cCCCCCCccchhhHHHHHHhhhh
Q 005169 272 WSPGAYENWTVIKD---M-LNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKE-FNLRKPSSYHYDLLLLGFLTLLC 346 (710)
Q Consensus 272 ~~p~~~r~W~V~~~---~-~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q~ke-~kLkKgsgyH~DLlllg~~t~ic 346 (710)
| .-.++ . .++. +.++++.+.+++.-++|+.=+..-+.++. .+..+....+=+++..|+-|+++
T Consensus 218 ~--------~~lP~~~~~g~~f~----~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~a 285 (415)
T TIGR00801 218 W--------FSLPTPFTFGPSFE----WPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLA 285 (415)
T ss_pred c--------cccCCccCCCceec----HHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHH
Confidence 2 11111 1 0122 23455566777888888854443333322 23333456778999999999999
Q ss_pred hccCCCCC
Q 005169 347 GLIGIPPS 354 (710)
Q Consensus 347 gllGLPw~ 354 (710)
|++|-.+.
T Consensus 286 glfG~~p~ 293 (415)
T TIGR00801 286 GLFGGFPN 293 (415)
T ss_pred HhcCCCCC
Confidence 99998875
No 9
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=98.07 E-value=0.00041 Score=81.83 Aligned_cols=326 Identities=18% Similarity=0.212 Sum_probs=185.0
Q ss_pred HHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHH-HHHHHhhhcc-cccccchhHHHHH
Q 005169 51 VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTF-MFNFAKERAD-LGRNLFIAWSGWV 128 (710)
Q Consensus 51 aIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~-ly~f~~~~~~-lg~~~fL~~~~WV 128 (710)
+|||+.+-+ +-.+=-|-|+.+..++|++||-.+=.-+|+++=+.++... +-+.+.+... .....++.-.+-+
T Consensus 98 ~iaYa~la~------lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~l 171 (665)
T KOG0236|consen 98 GLAYALLAG------LPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTL 171 (665)
T ss_pred HHHHHHHcC------CChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHH
Confidence 567766543 4455668899999999999999998887765555544332 1134443210 0013577788889
Q ss_pred HHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccc------ccccc-chhH
Q 005169 129 CVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF------IPSWR-FANG 201 (710)
Q Consensus 129 giWta~~l~llai~nas~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~------~~~~~-~~~~ 201 (710)
++-++++-+++.++..-.++.|+.+=.=--|..=.|+.-+...+|.+.+.=+.+.+.++...-+ ...|. ..+.
T Consensus 172 t~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (665)
T KOG0236|consen 172 TFLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKTLATL 251 (665)
T ss_pred HHHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcccccchhh
Confidence 9999999999999999999999987555556666677667777777766432332222211100 00011 2233
Q ss_pred HHHHHHHHHHHHHHHh--hccccccccc-cccccccccchhhHHHHHHhhhcccccCcccCCCCCccc-CCCCCCCCCCC
Q 005169 202 MFALVLSFGLLYTGLK--SRKARSWRYG-TGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRL-FSPNPWSPGAY 277 (710)
Q Consensus 202 llsliL~~Gt~~~a~~--lr~~rss~y~-~~~vR~~IaDygvpiaVl~~t~vsy~~~~~vP~~~~~rl-~~p~~~~p~~~ 277 (710)
.++++...-+ ...+ ..+.+ +++. -.--|+ .+.|++.|+++|....+-- +.+... ..|..+.|-
T Consensus 252 ~~~l~~l~~L--~~~k~~~~~~~-~k~~~v~~~~~-------li~vIi~T~~~~~~~~~~~-~~~~~~~~i~~g~~~~-- 318 (665)
T KOG0236|consen 252 VLSLIFLVVL--LLTKELNPKFK-KKLFSVPIPFE-------LIVVIIGTLISYIFRLEGR-YGPIIVGEIPRGFPPP-- 318 (665)
T ss_pred hhHHHHHHHH--HHHHHhhhhhc-ccceeecccHH-------HHHHHHHHHHHHHhccccc-cCCeeeccCCCCCCCC--
Confidence 3443322211 1222 11222 1111 111112 3688888998877642210 111111 222221111
Q ss_pred CCceEecCCCCccHHHHHHHHHH-HHHHHhhhhhcc-hhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhccCCCCCC
Q 005169 278 ENWTVIKDMLNVPIVYIIGAFIP-ATMIAVLYYFDH-SVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSN 355 (710)
Q Consensus 278 r~W~V~~~~~~vP~~~i~~AiiP-Alll~iL~F~D~-nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgllGLPw~n 355 (710)
.+|.......+++ |+.+++.-+.+| +|....+.++.++.. -+-+|+-+|++++++|++|.=+..
T Consensus 319 ----------~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd----~nqELiAlG~~Ni~sSff~~~p~t 384 (665)
T KOG0236|consen 319 ----------SLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGYKVD----SNQELIALGISNILSSFFGCYPTT 384 (665)
T ss_pred ----------CCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeC----CChHHHHHHHHHHhhhhhceEccc
Confidence 1121112223344 555555555555 444555554444433 246899999999999999954443
Q ss_pred CCCCCChhhhhhHHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhhhhhhhhhccc
Q 005169 356 GVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKELKESTIQAASC 435 (710)
Q Consensus 356 ga~PqSp~Ht~SLav~~~~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~ 435 (710)
|..-| |. + + . +
T Consensus 385 gs~sR------Sa----------------v---~------------------------------------------~--~ 395 (665)
T KOG0236|consen 385 GSFSR------SA----------------V---N------------------------------------------I--K 395 (665)
T ss_pred chhhH------HH----------------H---H------------------------------------------h--h
Confidence 32211 10 0 0 0 0
Q ss_pred CCCCCCCCccccccccccccccCcceeeeechhhHHHHHHHHHHhh-cccccccccchhhhhHHHHhhc
Q 005169 436 TGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVA-AMPFLKMIPTSVLWGYFAFMAI 503 (710)
Q Consensus 436 ~g~~~aP~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~-~~pvL~~IP~aVL~GvFlYMGi 503 (710)
.| ..|+++|++.++++.+.+. +.|.+..||++||..+...-+.
T Consensus 396 sG-------------------------~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~ 439 (665)
T KOG0236|consen 396 SG-------------------------GRTQVAGIVSAALVLLALLFLGPLFYYIPKCVLAAIIISALI 439 (665)
T ss_pred cC-------------------------CcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Confidence 01 1578999999999988865 5799999999999999875433
No 10
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.88 E-value=6.4e-05 Score=78.18 Aligned_cols=123 Identities=24% Similarity=0.372 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHhhhhhcchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhccCCCCCCCCCCCChhhhhhHHHHHH
Q 005169 294 IIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKH 373 (710)
Q Consensus 294 i~~AiiPAlll~iL~F~D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgllGLPw~nga~PqSp~Ht~SLav~~~ 373 (710)
+...+..|+.++++-++|+-.++....++. ++..-..-+++-+|+.|+++|++|--|.++..-||..+.+
T Consensus 146 ~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~---~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~------- 215 (280)
T PF00916_consen 146 ILDLLPTALAIAIVGFIESLLIAKSIAKKT---GYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVNYR------- 215 (280)
T ss_pred ccccchhHHHHHHHHHHHHHHhhhhhcccc---cccCCcHHHHHHhhhccccchhhcccccccccccchHHHh-------
Confidence 344456688999999999988877665543 4555778899999999999999987777666655433221
Q ss_pred HhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhhhhhhhhhhhhhcccCCCCCCCCcccccccccc
Q 005169 374 QLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGLKELKESTIQAASCTGNLNAPVDETLFDIEKE 453 (710)
Q Consensus 374 ~~~r~~~v~~a~~si~~~~s~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~g~~~aP~~~~~fd~e~~ 453 (710)
.|
T Consensus 216 --------------------------------------------------------------~G---------------- 217 (280)
T PF00916_consen 216 --------------------------------------------------------------AG---------------- 217 (280)
T ss_pred --------------------------------------------------------------cC----------------
Confidence 01
Q ss_pred ccccCcceeeeechhhHHHHHHHHHHh-hcccccccccchhhhhHHHHhhcccCCCchhHHH
Q 005169 454 IDDLLPVEVKEQRLSNLLQAIMVGGCV-AAMPFLKMIPTSVLWGYFAFMAIESLPGNQFWER 514 (710)
Q Consensus 454 i~~~l~v~V~EQRvS~ll~~lLig~sv-~~~pvL~~IP~aVL~GvFlYMGi~SL~GnQf~eR 514 (710)
. -+|+++++.++.+.+.+ +..|++.+||+++|.|+-.|.|++ |-.-.-+.+
T Consensus 218 --------a-~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~ili~~~~~-l~~~~~~~~ 269 (280)
T PF00916_consen 218 --------A-RTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAILIVVGIS-LIDWSSLRR 269 (280)
T ss_pred --------c-ceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCHHHHHH
Confidence 1 37899999999887765 457999999999999999999998 655333333
No 11
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=97.65 E-value=0.0067 Score=68.50 Aligned_cols=271 Identities=14% Similarity=0.150 Sum_probs=152.4
Q ss_pred hHHHHHhhhhhHHHHhhccchhcCC-cchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHHHHHHHhhhccccc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTEG-VLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGR 118 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~g-~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~ 118 (710)
.++||-.+++|.+-.+..++-..+. .+=++-+++.++++-++.+.+|..=.++.|.++-.+ ..+..+|......|.
T Consensus 18 vl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~---~~~~~i~~~~~~~g~ 94 (433)
T PRK11412 18 FFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWW---GTILTITLGEASRGT 94 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHH---HHHHHHHhcccccCc
Confidence 5667777888888888776543332 333556788999999999999888777788777533 345555643221111
Q ss_pred ccc---hhHHHHHHHHHHHHHHHHHHhc-cccccccccccchhHHHHHHHHHHHHHHHHHHhHh-cccCCCCCCCccccc
Q 005169 119 NLF---IAWSGWVCVWTALLLLMLSILG-ACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEE-FRIPERENPKLVQFI 193 (710)
Q Consensus 119 ~~f---L~~~~WVgiWta~~l~llai~n-as~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~-F~~p~~~~~~~~~~~ 193 (710)
++ +.-..+-.+=.+++.++++.++ ...+.|+||-...-..=++|.+-.+.-+++.+... +.. .+ ++
T Consensus 95 -~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~--~~-----~~- 165 (433)
T PRK11412 95 -PINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI--AD-----PN- 165 (433)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC--cc-----cc-
Confidence 11 1111234555667777777666 33455666766666777888888888888877542 110 00 01
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcc-cccCcccCCCCCcccCCCCCC
Q 005169 194 PSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVS-YIPSGDVPKGIPRRLFSPNPW 272 (710)
Q Consensus 194 ~~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vs-y~~~~~vP~~~~~rl~~p~~~ 272 (710)
.+|...+ +.+++.++...+.+. .+-|+++.-|++.+++++-..+. ...+.+.
T Consensus 166 ~~~~~~~----~~~a~~~l~~il~~~---------~~~~g~~~~~svLiGiv~G~v~a~~~~g~d~-------------- 218 (433)
T PRK11412 166 GKIQLPP----FGLSVAVMCLVLAMI---------IFLPQRIARYSLLVGTIVGWILWAFCFPSSH-------------- 218 (433)
T ss_pred cccchHH----HHHHHHHHHHHHHHH---------HHhhhHHHHHHHHHHHHHHHHHHHHHhCCCc--------------
Confidence 1121122 233344433333221 13366788899999998877653 2222110
Q ss_pred CCCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhh----cchhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhc
Q 005169 273 SPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYF----DHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGL 348 (710)
Q Consensus 273 ~p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~----D~nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgl 348 (710)
++...-.|... ++ ..|...=..++++.+++++.-.. |...++.+.+++ ..|...+|=-++.=|+.++++|+
T Consensus 219 ~~v~~a~w~~~-pf-G~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~---~~~~~~l~rgi~~dGi~s~lagl 293 (433)
T PRK11412 219 SLSGELHWQWF-PL-GSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQ---GAGNTRYRRSFVATGFMTLITVP 293 (433)
T ss_pred chhccCCceee-cC-CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCCcccccchhhccHHHHHHHh
Confidence 00011124322 22 12210112334444444444333 566666676553 22344666678888999999999
Q ss_pred cCCCCC
Q 005169 349 IGIPPS 354 (710)
Q Consensus 349 lGLPw~ 354 (710)
+|-++.
T Consensus 294 fg~~p~ 299 (433)
T PRK11412 294 LAVIPF 299 (433)
T ss_pred cCCCCC
Confidence 998874
No 12
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=97.35 E-value=0.02 Score=64.51 Aligned_cols=253 Identities=14% Similarity=0.183 Sum_probs=124.2
Q ss_pred hHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHh--cCcceeeeeccchhHHHHHHHHHHHhhhcccc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSII--GGQPLLILGVAEPTVIMYTFMFNFAKERADLG 117 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf--~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg 117 (710)
.+.||-.++++.+-.| ++..++++.++++-+++++. ++-|+ +.|+++ .|-..+-..+.. ...+
T Consensus 40 ~lam~~~~v~~Plilg----------l~~~~tl~~sGi~TllQ~~~~G~rlP~-v~G~sf---~f~~~~~~~~~~-~~~~ 104 (429)
T TIGR03616 40 AVAMFGATVLMPLLMG----------FDPNLTILMSGIGTLLFFLITGGRVPS-YLGSSA---AFVGAVIAATGY-NGQG 104 (429)
T ss_pred HHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHHHHHHHhCCCcee-EEcCcH---HHHHHHHHHHhh-cccC
Confidence 4556666666655554 22336899999999999864 56666 445544 333333222211 1111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhccc----cccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCccccc
Q 005169 118 RNLFIAWSGWVCVWTALLLLMLSILGAC----SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFI 193 (710)
Q Consensus 118 ~~~fL~~~~WVgiWta~~l~llai~nas----~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~ 193 (710)
..++++-..-..+-++++.++++.+... .+.|+|+--.--...++|.+-.+.-+++.+.. . .+
T Consensus 105 ~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~---------~---~~- 171 (429)
T TIGR03616 105 TNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSA---------S---GF- 171 (429)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhccc---------c---cc-
Confidence 2346676677788888888888876433 23344443333344455555444555543210 0 00
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccC--cccCCCCCcccCCCCC
Q 005169 194 PSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPS--GDVPKGIPRRLFSPNP 271 (710)
Q Consensus 194 ~~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~--~~vP~~~~~rl~~p~~ 271 (710)
.+| .+++++ +++....+ +.|+++.-+++.+++++-+++++... ...+..+ .
T Consensus 172 ~~~---~al~tl---~~i~l~~l-------------~~~~~l~~~avLiGivvG~iva~~l~~~~g~~~~v--------d 224 (429)
T TIGR03616 172 DSW---MAVLTI---LCIGAVAV-------------FTRGMLQRLLILVGLIAAYLAYFILTNVFGLGKAV--------D 224 (429)
T ss_pred ccH---HHHHHH---HHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccc--------c
Confidence 012 233332 22222222 22456677799999998887764321 0011000 0
Q ss_pred CCCCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchh----HHHHhhccccCCCCCCccchhhHHHHHHhhhhh
Q 005169 272 WSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSV----ASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCG 347 (710)
Q Consensus 272 ~~p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nI----ts~i~q~ke~kLkKgsgyH~DLlllg~~t~icg 347 (710)
+++-....|.-.+++. .|.+. +.++++-+..++.-++|+-= .+.+++++. ....+=-+..-|+-|.++|
T Consensus 225 ~s~v~~a~~~~lP~~~-~p~f~-~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~~-----~~~i~r~l~adGl~t~~ag 297 (429)
T TIGR03616 225 FSPISQAAWFGLPNFH-TPVFN-ANAMLLIAPVALILVAENLGHFKAVAGMTGRNL-----DPYMGRAFVGDGLATMLSG 297 (429)
T ss_pred CcccccCccccCCcCC-CceEc-HHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCC-----CchhccchhhhhHHHHHHH
Confidence 1111122344333322 22111 12222323334444555432 222333221 1125556778899999999
Q ss_pred ccCCCCC
Q 005169 348 LIGIPPS 354 (710)
Q Consensus 348 llGLPw~ 354 (710)
++|-++.
T Consensus 298 l~g~~p~ 304 (429)
T TIGR03616 298 SVGGTGV 304 (429)
T ss_pred hcCCCCC
Confidence 9998864
No 13
>PRK10720 uracil transporter; Provisional
Probab=97.23 E-value=0.049 Score=61.37 Aligned_cols=253 Identities=14% Similarity=0.144 Sum_probs=124.6
Q ss_pred hHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcC-cceeeeeccchhHHHHHHHHHHHhhhccccc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGG-QPLLILGVAEPTVIMYTFMFNFAKERADLGR 118 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~G-QPL~IlGvTGP~~if~~~ly~f~~~~~~lg~ 118 (710)
.+.||-++++|-+-+| ++..++++.++++-++++.+.| .=-++.|++ -.|-..+-.... .+
T Consensus 24 vl~m~~~~i~~Pli~g----------l~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~s---fa~i~~~~~~~~-~~---- 85 (428)
T PRK10720 24 LFAMFGATVLVPILFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGSS---FAFISPVLLLLP-LG---- 85 (428)
T ss_pred HHHHHHHHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHhccCccceEEeCc---HHHHHHHHHHHH-cc----
Confidence 4568888888888774 3345689999999999998775 333345543 333222222222 11
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhc----cccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccccc
Q 005169 119 NLFIAWSGWVCVWTALLLLMLSILG----ACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIP 194 (710)
Q Consensus 119 ~~fL~~~~WVgiWta~~l~llai~n----as~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~ 194 (710)
++-..=..++++++.++++.+- ...+.+.|+...--.|-++|.+--+.-+++.. .. .++ +.. +
T Consensus 86 ---~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~-g~--~~~--~~~---~-- 152 (428)
T PRK10720 86 ---YEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA-GL--LPA--EGQ---T-- 152 (428)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc-cc--cCC--CCc---c--
Confidence 1111225677777777777762 22345666665555555555554444444311 00 000 000 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCc-ccCCCCCcccCCCCCCC
Q 005169 195 SWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRRLFSPNPWS 273 (710)
Q Consensus 195 ~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~-~vP~~~~~rl~~p~~~~ 273 (710)
.+..+ +++++.++.+.+.. ++ +.|+++.-+++.+++++-+.+++..+. +.+ .+. ..+|.
T Consensus 153 -~~~~~----~~lalv~l~iil~~-----~~----~~kg~~~~~~iLigIvvG~ila~~lG~~d~~-~v~-----~a~~~ 212 (428)
T PRK10720 153 -PDSKT----IIISMVTLAVTVLG-----SV----LFRGFLAIIPILIGVLVGYALSFAMGMVDTT-PII-----EAHWF 212 (428)
T ss_pred -cchHH----HHHHHHHHHHHHHH-----HH----HhccHHHHhHHHHHHHHHHHHHHHhcCCCHH-Hhh-----cCccc
Confidence 01112 23333333333221 11 123344556688899888888766542 111 110 01111
Q ss_pred CCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhh--ccccCCCCCCccchhhHHHHHHhhhhhccCC
Q 005169 274 PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQ--QKEFNLRKPSSYHYDLLLLGFLTLLCGLIGI 351 (710)
Q Consensus 274 p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q--~ke~kLkKgsgyH~DLlllg~~t~icgllGL 351 (710)
. ...|.. + ++.+..+ .++.|..++ .++|+ +.+..+. .-+.+..|....+=+++.-|+-|+++|++|-
T Consensus 213 ~--lP~~~~--P--~fd~~~i-l~l~~~~lv---~~~Es-iG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~ 281 (428)
T PRK10720 213 A--LPTFYT--P--RFEWFAI-LTILPAALV---VIAEH-VGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS 281 (428)
T ss_pred c--CCCCCC--C--cCcHHHH-HHHHHHHHH---HHHHH-HHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCC
Confidence 0 000110 1 1222222 233333332 23454 2222211 1112222345678889999999999999998
Q ss_pred CCC
Q 005169 352 PPS 354 (710)
Q Consensus 352 Pw~ 354 (710)
++.
T Consensus 282 ~p~ 284 (428)
T PRK10720 282 TPN 284 (428)
T ss_pred CCc
Confidence 874
No 14
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=97.15 E-value=0.011 Score=65.45 Aligned_cols=269 Identities=16% Similarity=0.209 Sum_probs=127.2
Q ss_pred HHHHHhhhhhHHHHhhccc--hhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHHHHHHHhhh-cccc
Q 005169 41 TYIFFASAIPVISFGEQLE--RDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKER-ADLG 117 (710)
Q Consensus 41 ~fifFA~llPaIaFG~lL~--~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~ly~f~~~~-~~lg 117 (710)
+.++-..+.+.+-.+..++ +++. .=++-++++++++-+++++..|-|+.+.=..+-..+. .+...... ...
T Consensus 12 l~m~~~~iv~P~il~~~~g~~~~~~--~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~---~~~~~~g~~~~~- 85 (389)
T PF00860_consen 12 LAMFYIIIVVPLILAAAFGLDADTA--ALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIF---AFMIVIGMAESG- 85 (389)
T ss_dssp HHHHHHHHHHHHTTTS-------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHH---HHHGGG-----H-
T ss_pred HHHHHHHHHhHHHHhhcccccchhh--HHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhh---hhhcccccccch-
Confidence 3344444444444444433 3333 4457789999999999999888888776433333333 22222221 000
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhccc-cccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccccccc
Q 005169 118 RNLFIAWSGWVCVWTALLLLMLSILGAC-SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSW 196 (710)
Q Consensus 118 ~~~fL~~~~WVgiWta~~l~llai~nas-~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~~~ 196 (710)
..=++-..=..+..+++.++++.++.- .+.+.++.-.-....++|.+-...-+++.+...-.. .+.. .+ .
T Consensus 86 -~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~---~~~~--~~---~ 156 (389)
T PF00860_consen 86 -GYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGN---PDGL--LV---G 156 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS------BTT---B-----
T ss_pred -hhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhcccccccc---cccc--cc---c
Confidence 001122223557888888899988885 566777877777888888888888888877542211 0110 00 0
Q ss_pred cchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccC-cccCCCCCcccCCCCCCCCC
Q 005169 197 RFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPS-GDVPKGIPRRLFSPNPWSPG 275 (710)
Q Consensus 197 ~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~-~~vP~~~~~rl~~p~~~~p~ 275 (710)
...+...+++ ++...+.+.. +.|+...-|++.+++++-+.+++... .+.+..+ ...||
T Consensus 157 ~~~~~~~~~~----~~~~~~~~~~---------~~~~~~~~~ailigi~~g~i~~~~~g~~~~~~~~-----~~~~~--- 215 (389)
T PF00860_consen 157 DGKNLGLAVL----TLLFILLLSL---------FLKGFLRKGAILIGIIAGWIVAAILGVVDFSPSV-----SSAPW--- 215 (389)
T ss_dssp -HHHHHHHHH----HHHHHHHHHH---------SSSTTTTTHHHHHHHHHHHHHHHHHHHTTSSH-H-----HHS-S---
T ss_pred cccccccccc----cchhhhhhhh---------hhhhhcccccchhhhhhhhhhhhcccccccCccc-----ccccc---
Confidence 1111122222 2222222211 14555667899999998888775553 1111101 11122
Q ss_pred CCCCceEecCC--CCccHHHHHHHHHHHHHHHhhhhhcc----hhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhcc
Q 005169 276 AYENWTVIKDM--LNVPIVYIIGAFIPATMIAVLYYFDH----SVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLI 349 (710)
Q Consensus 276 ~~r~W~V~~~~--~~vP~~~i~~AiiPAlll~iL~F~D~----nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgll 349 (710)
+-.+.. +..|. .-..++++.+.+++.-++|+ .-.+.+++++..+ ....+--++.-|+-+.++|++
T Consensus 216 -----~~~p~~~~~g~p~-f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~---~~~~~r~l~~dg~~~~l~gl~ 286 (389)
T PF00860_consen 216 -----FSLPSPFPFGWPS-FDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPR---PPRIRRGLLADGLGTILAGLF 286 (389)
T ss_dssp -----S---------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCC---CCCHHHHHHHHHHHHHHHHHH
T ss_pred -----ccccccccccccc-ccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCcc---chhhcccceeeeeeeeechhh
Confidence 111100 11111 11233344444444445553 3333444443333 667778889999999999999
Q ss_pred CCCCC
Q 005169 350 GIPPS 354 (710)
Q Consensus 350 GLPw~ 354 (710)
|-.+.
T Consensus 287 G~~~~ 291 (389)
T PF00860_consen 287 GTSPT 291 (389)
T ss_dssp T---E
T ss_pred cCCCC
Confidence 98764
No 15
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=96.07 E-value=0.4 Score=54.73 Aligned_cols=269 Identities=18% Similarity=0.156 Sum_probs=158.3
Q ss_pred hHHHHHhhhhhHHHHhhccchhcC-CcchhhHHHHhhhHhHHHHHHhcC----cceeeeeccchhHHHHHHHHHHHhhhc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTE-GVLTAVQTLASTALCGIIHSIIGG----QPLLILGVAEPTVIMYTFMFNFAKERA 114 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~-g~lgv~E~Llstai~Giifslf~G----QPL~IlGvTGP~~if~~~ly~f~~~~~ 114 (710)
.+.||-+.+++.+.-|..++-.++ =.+=++-.++.++++-+++++-.+ |=..++|++- .|...+-...++.+
T Consensus 26 ~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sF---afi~p~i~~~~~~g 102 (451)
T COG2233 26 LLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSF---AFVAPMIAIGGTTG 102 (451)
T ss_pred HHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechH---HHHHHHHHHHhccC
Confidence 678999999999998887654432 233355678999999999999444 6667888754 22233333333322
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhccc-cccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCccccc
Q 005169 115 DLGRNLFIAWSGWVCVWTALLLLMLSILGAC-SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFI 193 (710)
Q Consensus 115 ~lg~~~fL~~~~WVgiWta~~l~llai~nas-~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~ 193 (710)
+ + + -....++-.+.++.++...=.. .+.|.|+-.---..-++|.+-.+.-|++.+...... ..+.+.
T Consensus 103 ~-~----~-~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~----~~~~~~-- 170 (451)
T COG2233 103 D-G----I-AALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGA----AGNPDF-- 170 (451)
T ss_pred C-c----h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCC----CCCccc--
Confidence 0 0 1 1123445544444444444334 666777776667777888888888888877654321 011000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCcccCCCCCcccCCCCCCC
Q 005169 194 PSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPNPWS 273 (710)
Q Consensus 194 ~~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~~vP~~~~~rl~~p~~~~ 273 (710)
. ..-.+.+++.|+.+.+... +|+ |.+++-+++.+++++-+.++++.+ .+. ++
T Consensus 171 --~----~~~~l~la~~tl~~il~~~-----~f~----~g~~~~i~ILiGlv~G~~la~~~G-~vd------------f~ 222 (451)
T COG2233 171 --G----SLENLGLALVTLLIILLIN-----RFG----KGFLRRIPILIGLVVGYLLALFMG-MVD------------FS 222 (451)
T ss_pred --C----chhHHHHHHHHHHHHHHHH-----HHh----hhHHHHHHHHHHHHHHHHHHHHhC-CcC------------cc
Confidence 0 1223455666665554442 333 455566788888888888776665 121 11
Q ss_pred CCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcc----hhHHHHhhccccCCCCCCccchhhHHHHHHhhhhhcc
Q 005169 274 PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDH----SVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLI 349 (710)
Q Consensus 274 p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~----nIts~i~q~ke~kLkKgsgyH~DLlllg~~t~icgll 349 (710)
+-....|+-++.....-...-+.|+++.+.+++.-..|| -.++.+.+| ++.|-.++|=-++-=|+.+++.|++
T Consensus 223 ~v~~a~w~~~P~~~~fg~~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~---~~~~~~~l~rg~~aDGlat~iag~f 299 (451)
T COG2233 223 GVAEAPWFALPTPFYFGMAFDWGAILTMLPVAIVTIVEHTGDITATGEITGR---DLDGKPRLRRGLLADGLATLIAGLF 299 (451)
T ss_pred ccccCceeeCCcccCCCeeecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCC---cCccCcccccceeeccHHHHHHHhc
Confidence 112233553332221101123456666677777666665 344555544 4445677888888889999999999
Q ss_pred CCCCC
Q 005169 350 GIPPS 354 (710)
Q Consensus 350 GLPw~ 354 (710)
|=||.
T Consensus 300 g~~p~ 304 (451)
T COG2233 300 GGFPN 304 (451)
T ss_pred CCCCC
Confidence 99984
No 16
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=48.38 E-value=11 Score=33.83 Aligned_cols=50 Identities=16% Similarity=0.323 Sum_probs=39.7
Q ss_pred hhh-HHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHH
Q 005169 48 AIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMY 103 (710)
Q Consensus 48 llP-aIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~ 103 (710)
.+| +++|+.+-+ +...--|.++.+++++|++||+-|..++|.|+-+.++.
T Consensus 30 ~iPq~~a~A~lAg------~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l~ 80 (84)
T PF13792_consen 30 AIPQGMAYALLAG------VPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLLI 80 (84)
T ss_pred HHHHHHHHHHHcC------CCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHHH
Confidence 467 899986543 33455588999999999999999999999988776653
No 17
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.44 E-value=24 Score=39.67 Aligned_cols=67 Identities=31% Similarity=0.406 Sum_probs=44.0
Q ss_pred ccchhhHHHHHHHHHHHhheeeechhhhhhHHHHHHHH------HHHhhhh-----cCCCCChhhhcccCcccccccCCC
Q 005169 542 FKTIAMFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLL------VPARQYI-----LPKFFKGVHLQDLDAAEYEEAPAL 610 (710)
Q Consensus 542 ~~~IhlFT~iQl~~l~~~f~vt~i~~aai~FPl~i~lL------IpiR~~l-----Lpk~F~~~eL~~LD~~e~ee~~~~ 610 (710)
-..|.++| .|++.+...|.=.|.|-++++ .+|++| -|||+.- +-|.|++---+.|..+||||-...
T Consensus 252 S~~ilmWt-Lqli~lvl~Yfsvq~p~~a~A--~iI~~lc~~~l~~pIrw~~~~~~kv~r~fkpl~rRlLtEeEYeeQaev 328 (452)
T KOG3817|consen 252 SQTILMWT-LQLIGLVLAYFSVQHPSAAIA--AIIMVLCFVALYFPIRWTNQIKFKVRRRFKPLKRRLLTEEEYEEQAEV 328 (452)
T ss_pred hhhHHHHH-HHHHHHHHHHHhcccHHHHHH--HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhhcCHHHHHHHHHH
Confidence 35678886 588888777777777766553 233333 3666542 345588777788999999885544
Q ss_pred C
Q 005169 611 P 611 (710)
Q Consensus 611 ~ 611 (710)
-
T Consensus 329 e 329 (452)
T KOG3817|consen 329 E 329 (452)
T ss_pred H
Confidence 4
No 18
>PF12075 KN_motif: KN motif; InterPro: IPR021939 This small motif is found at the N terminus of Kank proteins and has been called the KN (for Kank N-terminal) motif. This protein is found in eukaryotes. Proteins in this family are typically between 413 to 1202 amino acids in length. This protein is found associated with PF00023 from PFAM. This protein has two conserved sequence motifs: TPYG and LDLDF. Kank1 was obtained by positional cloning of a tumor suppressor gene in renal cell carcinoma, while the other members were found by homology search. The family is involved in the regulation of actin polymerisation and cell motility through signaling pathways containing PI3K/Akt and/or unidentified modulators/effectors [].
Probab=28.44 E-value=23 Score=27.75 Aligned_cols=18 Identities=28% Similarity=0.680 Sum_probs=12.6
Q ss_pred CCCCCCccchhhHHHHHH
Q 005169 325 NLRKPSSYHYDLLLLGFL 342 (710)
Q Consensus 325 kLkKgsgyH~DLlllg~~ 342 (710)
-++-|-||||||=-|-.+
T Consensus 3 sv~tPYGyhiDLDFvkyv 20 (39)
T PF12075_consen 3 SVETPYGYHIDLDFVKYV 20 (39)
T ss_pred cccCCcceeecchHHHHH
Confidence 356689999998555443
No 19
>PF13172 PepSY_TM_1: PepSY-associated TM helix
Probab=23.75 E-value=97 Score=22.93 Aligned_cols=25 Identities=28% Similarity=0.594 Sum_probs=20.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhccc
Q 005169 121 FIAWSGWVCVWTALLLLMLSILGAC 145 (710)
Q Consensus 121 fL~~~~WVgiWta~~l~llai~nas 145 (710)
+..+--|+|+++++++++++++|+-
T Consensus 5 ~~~~H~~~g~~~~~~ll~~~lTG~~ 29 (34)
T PF13172_consen 5 WRKIHRWLGLIAAIFLLLLALTGAL 29 (34)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456679999999999999998863
No 20
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=21.11 E-value=2.7e+02 Score=31.94 Aligned_cols=101 Identities=12% Similarity=0.201 Sum_probs=72.9
Q ss_pred chhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHhccc
Q 005169 66 LTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGAC 145 (710)
Q Consensus 66 lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas 145 (710)
.-+.+.+..++++.++-+.|||-+..+=+.|. .+|.+.+ +++| ..=|.|-+++++++.+++..|.+
T Consensus 254 ~p~~~~~~~tGl~sll~ApfGg~~~nlaaita----------Aic~G~~--ah~d-~~rR~~a~i~~Gv~yll~glfag- 319 (395)
T TIGR00843 254 APAKPIIAAAGLAALFAAFAGGISIGIAAITA----------AICMGKD--AHED-KDKRWIAAAAAGIFYLLAGLFAG- 319 (395)
T ss_pred CCchHHHHHHHHHHHHHhccCCchhhhhHHhH----------HHhcCcc--cccC-cCccchHHHHHHHHHHHHHHHHH-
Confidence 45899999999999999999999987766433 3455543 2233 55677889999999999999977
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHhHhcc
Q 005169 146 SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFR 180 (710)
Q Consensus 146 ~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~ 180 (710)
.+..-+.-+-.|+-..+-.+-.+--=...+..-|+
T Consensus 320 ~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~~ 354 (395)
T TIGR00843 320 AITALFAALPKELIAALAGLALLGAIAGNIKIALH 354 (395)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66777777888887777666544333334444554
No 21
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=20.00 E-value=1.4e+03 Score=26.64 Aligned_cols=93 Identities=23% Similarity=0.366 Sum_probs=60.5
Q ss_pred hHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHHHHHHHhhhcccccccchhHHHH--HHHHHHHHHHHHHHhcccc
Q 005169 69 VQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGW--VCVWTALLLLMLSILGACS 146 (710)
Q Consensus 69 ~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~W--VgiWta~~l~llai~nas~ 146 (710)
.-+.++++++-++.++++--|..+-=.-| +-..+-|..+...+ ++|+.= ..+|++++-++++.++.=.
T Consensus 56 ~AT~l~a~~gs~~mgl~An~P~alapgmg---lnAfFaftvv~~~g-------i~wq~AL~aVF~sGiif~ils~t~iR~ 125 (436)
T COG2252 56 VATCLAAAIGSIAMGLYANLPIALAPGMG---LNAFFAFTVVLGMG-------LSWQVALGAVFLSGIIFLLLSLTGIRE 125 (436)
T ss_pred HHHHHHHHHHHHHHHHHHcCchhhcchhh---HHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 35667778888899999999987754444 33344566676653 455543 5678888889999998855
Q ss_pred cc-ccccc----cchhHHHHHHHHHHHHHH
Q 005169 147 II-NRFTR----VAGELFGLLIAMLFMQQA 171 (710)
Q Consensus 147 li-~~~TR----fTeEiF~~LIsviFi~ea 171 (710)
++ |.+-+ =..---|++|++|-..++
T Consensus 126 ~ii~~IP~~lk~ai~aGIGlFia~IgL~~~ 155 (436)
T COG2252 126 WIINAIPRSLKLAIGAGIGLFIALIGLKNA 155 (436)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 43 44432 223345677777766643
Done!