Query 005169
Match_columns 710
No_of_seqs 175 out of 558
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 17:29:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bzk_A Protein (BAND 3 anion t 99.7 2.5E-19 8.4E-24 137.8 -0.7 43 17-61 1-43 (43)
2 1bnx_A Protein (BAND 3); human 99.5 3E-15 1E-19 109.6 1.0 34 17-61 1-34 (34)
3 1bts_A BAND 3 anion transport 98.7 3.8E-09 1.3E-13 73.1 2.5 26 66-91 1-26 (26)
4 1btq_A BAND 3 anion transport 98.7 2.4E-09 8.2E-14 74.0 0.7 26 35-60 1-26 (26)
5 1bh7_A BAND 3; membrane protei 98.7 1.2E-09 4.1E-14 79.6 -0.9 33 509-547 1-33 (33)
6 3qe7_A Uracil permease; uracil 97.7 0.0011 3.8E-08 72.8 18.2 254 40-354 25-285 (429)
7 1qle_D Cytochrome AA3, ccytoch 20.4 80 0.0028 24.1 3.2 25 120-144 19-43 (43)
8 2xov_A Rhomboid protease GLPG; 18.6 2.7E+02 0.0094 26.2 7.4 62 42-105 59-120 (181)
9 1m56_D Cytochrome C oxidase; m 15.0 1.3E+02 0.0044 23.8 3.3 25 120-144 27-51 (51)
10 2l8s_A Integrin alpha-1; trans 14.1 1.1E+02 0.0039 24.5 2.8 20 288-307 6-25 (54)
No 1
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=99.72 E-value=2.5e-19 Score=137.81 Aligned_cols=43 Identities=35% Similarity=0.601 Sum_probs=40.5
Q ss_pred hccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchh
Q 005169 17 GRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERD 61 (710)
Q Consensus 17 rR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIaFG~lL~~~ 61 (710)
||+|||+|||+||+| .||+++++||||||++|+||||++|+++
T Consensus 1 rR~p~Y~SD~~dg~~--~~~laa~~fiyFa~l~PaIaFG~ll~~~ 43 (43)
T 1bzk_A 1 XRYPYYLSDITDAFS--PQVLAAVIFIYFAALSPAITFGGLLGEK 43 (43)
T ss_dssp -CCSTTHHHHTTSSC--SHHHHHHHHHHHHTSTTTTTSSCCCCCC
T ss_pred CCCcccHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 799999999999999 7999999999999999999999999874
No 2
>1bnx_A Protein (BAND 3); human erythrocyte anion transporter, transmembrane, synthetic peptide, electron transport; NMR {Synthetic} SCOP: j.35.1.1
Probab=99.49 E-value=3e-15 Score=109.56 Aligned_cols=34 Identities=35% Similarity=0.612 Sum_probs=31.5
Q ss_pred hccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchh
Q 005169 17 GRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERD 61 (710)
Q Consensus 17 rR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIaFG~lL~~~ 61 (710)
||+|||+|||+| ++||||||++|+||||++|+++
T Consensus 1 rR~p~Y~SD~~d-----------~~fiyFa~l~PaIaFg~ll~~~ 34 (34)
T 1bnx_A 1 XRYPYYLSDITD-----------VIFIYFAALSPAITFGGLLGEK 34 (34)
T ss_dssp -CCSTTTHHHHH-----------HHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCcccHHHHHH-----------HHHHHHHHHHHHHHHHHHHccC
Confidence 799999999999 9999999999999999999864
No 3
>1bts_A BAND 3 anion transport protein; transmembrane protein; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 1btt_A
Probab=98.73 E-value=3.8e-09 Score=73.09 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=20.7
Q ss_pred chhhHHHHhhhHhHHHHHHhcCccee
Q 005169 66 LTAVQTLASTALCGIIHSIIGGQPLL 91 (710)
Q Consensus 66 lgv~E~Llstai~Giifslf~GQPL~ 91 (710)
+||+|+++||++||++|++||||||+
T Consensus 1 ~gv~E~i~s~ai~Gi~f~lf~gQPL~ 26 (26)
T 1bts_A 1 XGVSELLISTAVQGILFALLGAXXXX 26 (26)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTC----
T ss_pred CchhHHHHHHHHHHHHHHHHhcccCC
Confidence 58999999999999999999999995
No 4
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=98.70 E-value=2.4e-09 Score=74.01 Aligned_cols=26 Identities=35% Similarity=0.740 Sum_probs=24.5
Q ss_pred eeechhHHHHHhhhhhHHHHhhccch
Q 005169 35 RILAPTTYIFFASAIPVISFGEQLER 60 (710)
Q Consensus 35 ~~last~fifFA~llPaIaFG~lL~~ 60 (710)
||+++++||||||++|+||||++|++
T Consensus 1 q~laa~~FlyFa~l~paIaFGgLl~~ 26 (26)
T 1btq_A 1 XVLAAVIFIYFAALSPAITFGXXXXX 26 (26)
T ss_pred ChHHHHHHHHHHHHcchhccccccCC
Confidence 68999999999999999999999875
No 5
>1bh7_A BAND 3; membrane protein, cytoplasmic loop, anion exchange protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=98.70 E-value=1.2e-09 Score=79.59 Aligned_cols=33 Identities=30% Similarity=0.516 Sum_probs=28.2
Q ss_pred chhHHHHHhhhcCCCCccccccccccccccccCccchhh
Q 005169 509 NQFWERILLLFTAPSRRYKVLEEYHATFVETVPFKTIAM 547 (710)
Q Consensus 509 nQf~eRilLlf~~p~~ry~~~~~~~~~yvr~VP~~~Ihl 547 (710)
+|||||++|+|||+|+ +|+.+|+|+||++|||+
T Consensus 1 iQ~~~Ri~L~fmp~k~------~P~~~Yvr~Vp~~r~Hl 33 (33)
T 1bh7_A 1 IQLFDRILLLFKPPKY------HPDVPYVKRVKTWRMHL 33 (33)
T ss_dssp CCCTTTTCC-CCCSSC------CCC-CCCCTTHHHHHTC
T ss_pred CcHHHHHHHHcCCccc------CCCCceEEEcceeeeeC
Confidence 5999999999999886 47889999999999995
No 6
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=97.69 E-value=0.0011 Score=72.82 Aligned_cols=254 Identities=14% Similarity=0.101 Sum_probs=132.7
Q ss_pred hHHHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceee-eeccchhHHHHHHHHHHHhhhccccc
Q 005169 40 TTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLI-LGVAEPTVIMYTFMFNFAKERADLGR 118 (710)
Q Consensus 40 t~fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~I-lGvTGP~~if~~~ly~f~~~~~~lg~ 118 (710)
.+-||-+.+++-+..|. +...+++.++++.+++++++|-|+-+ +|++.-. ...+....+ ++ .
T Consensus 25 ~lam~~~~v~~PlilGl----------~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfaf---i~~~~~i~~-~g---~ 87 (429)
T 3qe7_A 25 LFAMFGATVLVPVLFHI----------NPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAF---ISPVLLLLP-LG---Y 87 (429)
T ss_dssp HHHHHHHHHHHHHTTTS----------CHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGG---HHHHHHHGG-GC---H
T ss_pred HHHHHHHHHHhHHHhCC----------CHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHH---HHHHHHHHh-cC---H
Confidence 34455566555444442 34579999999999999999888876 7776432 222332222 22 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHh--cc--ccccccccccchhHHHHHHHHHHHHHHHHHHhHhcccCCCCCCCcccccc
Q 005169 119 NLFIAWSGWVCVWTALLLLMLSIL--GA--CSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIP 194 (710)
Q Consensus 119 ~~fL~~~~WVgiWta~~l~llai~--na--s~li~~~TRfTeEiF~~LIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~ 194 (710)
+. ..=..+.++++.++++.+ .. ..++|++..-.--.|-++|.+.-+.-+++... .... +. .+ .
T Consensus 88 -~~---~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~----~~~~-~~---~~-~ 154 (429)
T 3qe7_A 88 -EV---ALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAG----LLPA-EG---QT-P 154 (429)
T ss_dssp -HH---HHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHT----SSCB-TT---BC-C
T ss_pred -HH---HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhcc----ccCC-CC---cc-c
Confidence 11 122456677777777776 33 35677777654445555555555555554321 0000 00 00 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhHHHHHHhhhcccccCc-ccCCCCCcccCCCCCCC
Q 005169 195 SWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRRLFSPNPWS 273 (710)
Q Consensus 195 ~~~~~~~llsliL~~Gt~~~a~~lr~~rss~y~~~~vR~~IaDygvpiaVl~~t~vsy~~~~-~vP~~~~~rl~~p~~~~ 273 (710)
+ .-.+.+++.++.+.+.+.+ + .|+++.-+++.+++++-+.+++..+. +.+. +. ..||-
T Consensus 155 --~----~~~~~la~~tl~iii~~~~-----~----~kg~~~~~aiLigivvg~~~a~~~G~~d~~~-v~-----~a~~~ 213 (429)
T 3qe7_A 155 --D----SKTIIISITTLAVTVLGSV-----L----FRGFLAIIPILIGVLVGYALSFAMGIVDTTP-II-----NAHWF 213 (429)
T ss_dssp --C----HHHHHHHHHHHHHHHHHHH-----S----SSTTTTTHHHHHHHHHHHHHHHHHHHTTSSH-HH-----HSCSS
T ss_pred --c----HHHHHHHHHHHHHHHHHHH-----H----hcccchhhHHHHHHHHHHHHHHHhcCCCccc-cc-----ccccc
Confidence 1 1123344444443333221 2 23444557899999988887765431 2111 10 01120
Q ss_pred CCCCCCceEecCCCCccHHHHHHHHHHHHHHHhhhhhcchhHHHHhh-ccccCCCCCCccchhhHHHHHHhhhhhccCCC
Q 005169 274 PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQ-QKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIP 352 (710)
Q Consensus 274 p~~~r~W~V~~~~~~vP~~~i~~AiiPAlll~iL~F~D~nIts~i~q-~ke~kLkKgsgyH~DLlllg~~t~icgllGLP 352 (710)
. ...|. . + ++.+ .++++.+.+++.-++|+-=+..-+. .-+.+..|....|=.++.-|+-|.++|++|-+
T Consensus 214 ~--lP~~~-~-P--~f~~----~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~ 283 (429)
T 3qe7_A 214 A--LPTLY-T-P--RFEW----FAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGST 283 (429)
T ss_dssp C--CCCCC-C-C--CCCH----HHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred c--ccCCC-C-C--cccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCC
Confidence 0 00011 0 1 1222 2333444455555667643322211 11223435667888999999999999999988
Q ss_pred CC
Q 005169 353 PS 354 (710)
Q Consensus 353 w~ 354 (710)
+.
T Consensus 284 p~ 285 (429)
T 3qe7_A 284 PN 285 (429)
T ss_dssp CE
T ss_pred Cc
Confidence 75
No 7
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=20.36 E-value=80 Score=24.12 Aligned_cols=25 Identities=24% Similarity=0.523 Sum_probs=23.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhcc
Q 005169 120 LFIAWSGWVCVWTALLLLMLSILGA 144 (710)
Q Consensus 120 ~fL~~~~WVgiWta~~l~llai~na 144 (710)
.|+.|.-|.++=++++++++++|++
T Consensus 19 gFi~~~k~gt~~~~~~ll~maif~~ 43 (43)
T 1qle_D 19 GFIKGATWVSILSIAVLVFLALANS 43 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4999999999999999999999985
No 8
>2xov_A Rhomboid protease GLPG; membrane protein, hydrolase, intramembrane protease; HET: BNG; 1.65A {Escherichia coli} PDB: 2ic8_A* 2nrf_A 2xtu_A* 2irv_A* 3b45_A* 2o7l_A* 2xow_A* 3txt_A* 2xtv_A* 3b44_A*
Probab=18.55 E-value=2.7e+02 Score=26.17 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=37.7
Q ss_pred HHHHhhhhhHHHHhhccchhcCCcchhhHHHHhhhHhHHHHHHhcCcceeeeeccchhHHHHHH
Q 005169 42 YIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTF 105 (710)
Q Consensus 42 fifFA~llPaIaFG~lL~~~T~g~lgv~E~Llstai~Giifslf~GQPL~IlGvTGP~~if~~~ 105 (710)
.=.+.|...-..||..+++.-+..-=..=.+++...+++...++.+.+ .+|.+|-+.-...+
T Consensus 59 ~Hl~~Nm~~l~~~g~~~E~~~G~~~fl~~yl~~~i~~~l~~~~~~~~~--~vGaSGai~gl~g~ 120 (181)
T 2xov_A 59 MHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPW--FGGLSGVVYALMGY 120 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCSC--CCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCC--ceeHHHHHHHHHHH
Confidence 344567777888999888754322112223445555666667777655 78998876544443
No 9
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=15.04 E-value=1.3e+02 Score=23.80 Aligned_cols=25 Identities=24% Similarity=0.436 Sum_probs=23.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhcc
Q 005169 120 LFIAWSGWVCVWTALLLLMLSILGA 144 (710)
Q Consensus 120 ~fL~~~~WVgiWta~~l~llai~na 144 (710)
.|+.|.-|.++=++++++++++|++
T Consensus 27 gFi~~~k~gt~~~~~~ll~laif~~ 51 (51)
T 1m56_D 27 GFVRMVTWAAVVIVAALIFLALANA 51 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4999999999999999999999974
No 10
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=14.13 E-value=1.1e+02 Score=24.49 Aligned_cols=20 Identities=20% Similarity=0.370 Sum_probs=14.1
Q ss_pred CccHHHHHHHHHHHHHHHhh
Q 005169 288 NVPIVYIIGAFIPATMIAVL 307 (710)
Q Consensus 288 ~vP~~~i~~AiiPAlll~iL 307 (710)
.+|+|.|.+|++-|+++..|
T Consensus 6 ~vp~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 6 RVPLWVILLSAFAGLLLLML 25 (54)
T ss_dssp CCCTHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHH
Confidence 47888888887777665544
Done!