Query 005170
Match_columns 710
No_of_seqs 370 out of 2255
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 17:31:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005170.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005170hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uyla_ d.122.1.1 (A:) HSP90 { 99.9 1.2E-23 9E-28 209.3 10.9 166 197-371 11-203 (208)
2 d2iwxa1 d.122.1.1 (A:2-214) HS 99.9 1.4E-23 1E-27 209.6 10.9 165 198-371 13-205 (213)
3 d2gqpa1 d.122.1.1 (A:74-337) H 99.9 4.1E-23 3E-27 208.0 9.4 164 197-371 10-207 (227)
4 d1b63a2 d.122.1.2 (A:-2-216) D 99.5 1.3E-14 9.5E-19 144.5 9.9 142 189-343 2-150 (218)
5 d1h7sa2 d.122.1.2 (A:29-231) D 99.5 6.5E-14 4.7E-18 137.8 10.2 93 208-309 4-101 (203)
6 d2hkja3 d.122.1.2 (A:10-228) T 99.1 3.1E-10 2.3E-14 112.0 13.4 97 211-311 23-129 (219)
7 d1bxda_ d.122.1.3 (A:) Histidi 98.0 3.7E-06 2.7E-10 78.5 7.4 89 211-308 48-139 (161)
8 d1pvga2 d.122.1.2 (A:7-245) DN 98.0 1.7E-05 1.3E-09 78.8 12.1 87 211-306 54-156 (239)
9 d1kija2 d.122.1.2 (A:9-220) DN 97.8 3.5E-05 2.6E-09 75.1 9.9 121 211-345 27-165 (212)
10 d1id0a_ d.122.1.3 (A:) Histidi 97.7 2.3E-05 1.6E-09 71.8 7.6 85 211-306 45-132 (146)
11 d1ysra1 d.122.1.3 (A:299-446) 97.7 2.5E-05 1.8E-09 71.6 7.2 87 211-307 45-135 (148)
12 d1gkza2 d.122.1.4 (A:186-378) 97.7 1.6E-05 1.2E-09 75.4 5.4 90 211-306 54-175 (193)
13 d1jm6a2 d.122.1.4 (A:1177-1366 97.6 3.2E-05 2.3E-09 73.7 6.9 90 211-306 61-166 (190)
14 d1s14a_ d.122.1.2 (A:) Topoiso 97.6 6.2E-05 4.5E-09 71.0 7.8 140 213-392 8-157 (168)
15 d1ei1a2 d.122.1.2 (A:2-220) DN 97.6 7.3E-05 5.3E-09 73.3 8.5 120 211-345 35-171 (219)
16 d2c2aa2 d.122.1.3 (A:321-481) 97.6 4.2E-05 3.1E-09 70.8 6.4 89 211-307 50-147 (161)
17 d1y8oa2 d.122.1.4 (A:177-301) 97.4 0.00011 7.7E-09 63.5 6.0 51 211-267 65-125 (125)
18 d1th8a_ d.122.1.3 (A:) Anti-si 96.7 0.00075 5.5E-08 60.7 5.8 83 211-307 40-127 (139)
19 d1r62a_ d.122.1.3 (A:) Nitroge 96.7 0.00013 9.6E-09 66.9 -0.0 87 211-306 45-143 (156)
20 d1ixma_ d.123.1.1 (A:) Sporula 96.6 0.00061 4.4E-08 60.7 4.0 58 211-272 98-159 (179)
21 d1we9a_ g.50.1.2 (A:) PHD fing 87.1 0.12 8.7E-06 39.9 2.0 35 597-631 17-54 (64)
22 d1weea_ g.50.1.2 (A:) PHD fing 84.3 0.29 2.1E-05 38.5 3.1 33 598-630 27-61 (72)
23 d1wepa_ g.50.1.2 (A:) PHD fing 84.1 0.084 6.1E-06 42.7 -0.3 35 597-631 22-59 (79)
24 d1wema_ g.50.1.2 (A:) Death as 63.7 0.96 7E-05 35.5 0.9 32 599-630 27-65 (76)
25 d1mm2a_ g.50.1.2 (A:) Mi2-beta 51.0 3.9 0.00029 30.7 2.5 33 599-631 18-52 (61)
26 d1ow1a_ b.131.1.3 (A:) SMART/H 34.5 12 0.00086 34.0 3.4 53 68-124 76-143 (170)
27 d1f62a_ g.50.1.2 (A:) Williams 32.3 6 0.00044 28.3 0.7 29 600-630 13-45 (51)
28 d1weva_ g.50.1.2 (A:) PHD fing 32.2 12 0.00085 29.7 2.6 33 599-631 30-68 (88)
29 d1wewa_ g.50.1.2 (A:) Sumoylat 27.4 7.8 0.00057 30.3 0.7 31 601-631 29-68 (78)
No 1
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.2e-23 Score=209.35 Aligned_cols=166 Identities=24% Similarity=0.308 Sum_probs=127.5
Q ss_pred HHHHHHhhccccCCHHHHHHHHHhcccccCC----------------CccEEEEEeeecccCCCCcCEEEEEeCCCCCCh
Q 005170 197 PSYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTH 260 (710)
Q Consensus 197 p~~L~~lst~~~~~~~~AIaELIDNS~DA~A----------------~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~ 260 (710)
.+.|+.+..+.|+++..+|+|||+||.||.. ....|.|.. +.+..+|+|.|||.||++
T Consensus 11 ~~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~I~DnGiGMt~ 84 (208)
T d1uyla_ 11 AQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP------NKQDRTLTIVDTGIGMTK 84 (208)
T ss_dssp HHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE------ETTTTEEEEEECSCCCCH
T ss_pred HHHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhccCCcccceEEee------cCCccEEEEEcCCccccH
Confidence 3567777888899999999999999999931 334455542 245789999999999999
Q ss_pred hhHHhhhh-cccCCC--------CCCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCceEEEcCc
Q 005170 261 QDVVRMTY-FGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIV 331 (710)
Q Consensus 261 edl~~~l~-fG~s~k--------~~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~~i~VPi~ 331 (710)
+++.+.++ +|.|.+ ...+...|||||+||+|++| +++++.|.||+.+.....++|.. .+...+.....
T Consensus 85 ~el~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGVGFyS~Fm-Vad~v~V~sk~~~~~~~~~~~~~--~~~~~~~~~~~ 161 (208)
T d1uyla_ 85 ADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDDEQYAWESSA--GGSFTVRTDTG 161 (208)
T ss_dssp HHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--TTEEEEEECCS
T ss_pred HHHHhhcccccccchHHHHHhhhhccchhhhhhcccceEEeee-ccCceEEEEecCCcchheeeecc--CCCceEEeccc
Confidence 99998764 555432 12356899999999999999 99999999998887655555533 34445555544
Q ss_pred ccCCCCcEEEEEecCcc-cchhhhhHHh-HhhhCCCchhhHH
Q 005170 332 SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 371 (710)
Q Consensus 332 ~~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~pI~ 371 (710)
....+||.|+|+++++. ++..++.++. |.+||.|..+||.
T Consensus 162 ~~~~~GT~I~L~lk~d~~efl~~~~i~~likkys~fi~~PI~ 203 (208)
T d1uyla_ 162 EPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIT 203 (208)
T ss_dssp SCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEE
T ss_pred ccCCCCcEEEEEeCCChHHHcCHHHHHHHHHHHhcccCcCeE
Confidence 55568999999998765 6777888865 9999999998884
No 2
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=1.4e-23 Score=209.60 Aligned_cols=165 Identities=22% Similarity=0.296 Sum_probs=126.3
Q ss_pred HHHHHhhccccCCHHHHHHHHHhcccccCC----------------CccEEEEEeeecccCCCCcCEEEEEeCCCCCChh
Q 005170 198 SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQ 261 (710)
Q Consensus 198 ~~L~~lst~~~~~~~~AIaELIDNS~DA~A----------------~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~e 261 (710)
+.|+.++.+.|+++..+|+|||+||.||.+ ..+.|.+.. +.+...|+|.|||.||+.+
T Consensus 13 ~ll~ll~~~lYs~~~iflRELiqNa~DA~~~~~~~~~~~~~~~~~~~~~~I~i~~------d~~~~~l~i~DnGiGMt~~ 86 (213)
T d2iwxa1 13 QLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITP------KPEQKVLEIRDSGIGMTKA 86 (213)
T ss_dssp HHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHTTTCGGGGTTSCCCCEEEEE------EGGGTEEEEEECSSCCCHH
T ss_pred HHHHHHHHhhcCCchHHHHHHHHhHHHHHHHHHHhhccCcccccCCccccccccc------ccccceeEEecCCccccHH
Confidence 577888888899999999999999999942 244455542 2357899999999999999
Q ss_pred hHHhhh-hcccCCCC--------CCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCceEEE-cCc
Q 005170 262 DVVRMT-YFGHKQPD--------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEI-PIV 331 (710)
Q Consensus 262 dl~~~l-~fG~s~k~--------~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~~i~V-Pi~ 331 (710)
++.+.| .+|.|.+. ..+...||||||||+|++| +++++.|.||+.+.....++|.. .+...+.. ...
T Consensus 87 ~~~~~l~~ia~S~~~~~~~~~~~~~~~~~IGqFGIGfyS~Fm-vad~v~V~trs~~~~~~~~~~~~--~~~~~~~~~~~~ 163 (213)
T d2iwxa1 87 ELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFL-VADRVQVISKSNDDEQYIWESNA--GGSFTVTLDEVN 163 (213)
T ss_dssp HHHHHHTTCCCSTHHHHHHHHHHTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--SSEEEEEECSSS
T ss_pred HHHHHHhhhhcccchHHHhhhhhhhhhhhhcccccchhhhhh-hccceeEEeecCCcccceeeEec--CCCcEEEEEecc
Confidence 998865 57877542 2356789999999999998 99999999999887655544432 23333332 222
Q ss_pred ccCCCCcEEEEEecCcc-cchhhhhHH-hHhhhCCCchhhHH
Q 005170 332 SYYRKGQFMELDTVVQS-EATAKYNLK-SIKEFSPFNKYLIG 371 (710)
Q Consensus 332 ~~~~~Gt~I~l~~~~~~-e~~~~~~L~-~I~kySpF~s~pI~ 371 (710)
....+||.|+|+++++. ++..++.++ +|.+||.|..+||.
T Consensus 164 ~~~~~GT~I~L~lk~d~~efle~~rlk~iIkkYS~fI~~PI~ 205 (213)
T d2iwxa1 164 ERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQ 205 (213)
T ss_dssp CCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCCCCSSCEE
T ss_pred CCCCCcEEEEEEeCccHHHhcCHHHHHHHHHHHhcCcCcCeE
Confidence 33457999999998765 677888886 59999999999885
No 3
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=99.87 E-value=4.1e-23 Score=208.00 Aligned_cols=164 Identities=20% Similarity=0.295 Sum_probs=123.0
Q ss_pred HHHHHHhhccccCCHHHHHHHHHhcccccC----------------CCccEEEEEeeecccCCCCcCEEEEEeCCCCCCh
Q 005170 197 PSYLQTLGQAHSGWIFGAIAELVDNSRDAK----------------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTH 260 (710)
Q Consensus 197 p~~L~~lst~~~~~~~~AIaELIDNS~DA~----------------A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~ 260 (710)
...|+-++.+.|+++..+|+|||+||.||. ...+.|.+.. +.+...|+|.|||.||++
T Consensus 10 ~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~i~DnGiGMt~ 83 (227)
T d2gqpa1 10 NRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKC------DKEKNLLHVTDTGVGMTR 83 (227)
T ss_dssp HHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEE------ETTTTEEEEEECSCCCCH
T ss_pred HHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCcccccccchhhhhccc------CCCCcEEEEEecCccccH
Confidence 456777788888999999999999999993 1234444442 235789999999999999
Q ss_pred hhHHhhhh-cccCCCC-------------CCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCceE
Q 005170 261 QDVVRMTY-FGHKQPD-------------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNL 326 (710)
Q Consensus 261 edl~~~l~-fG~s~k~-------------~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~~i 326 (710)
+++.+.++ +|.|... ..+...|||||+||+|||| ++++|.|.||+.+.. ++.|.+ .+...+
T Consensus 84 ~e~~~~lgtIa~Sgt~~f~~~~~~~~~~~~~~~~~IGqFGvGfyS~Fm-Vad~V~v~s~~~~~~--~~~W~s--~g~~~~ 158 (227)
T d2gqpa1 84 EELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNNDT--QHIWES--DSNEFS 158 (227)
T ss_dssp HHHHHHHHCC---------------------CHHHHHHTTCGGGGGGG-TEEEEEEEEECTTSC--CEEEEE--SSSCEE
T ss_pred HHHHHHHHHHhhcchHHHHHhhhhcccccccchhhhhhcCcceeEEEe-eeeeEEEEEeccCCc--ccEEEe--cCCCce
Confidence 99998774 5554321 1123579999999999999 999999999988753 456765 455566
Q ss_pred EEcCc--ccCCCCcEEEEEecCcc-cchhhhhHHh-HhhhCCCchhhHH
Q 005170 327 EIPIV--SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG 371 (710)
Q Consensus 327 ~VPi~--~~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~pI~ 371 (710)
++... ....+||.|+|+++++. ++...+.++. |.+||.|..+||.
T Consensus 159 ~i~~~~~~~~~rGT~I~L~Lk~d~~efl~~~rl~~iIkkYs~fI~~PI~ 207 (227)
T d2gqpa1 159 VIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIY 207 (227)
T ss_dssp EEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEE
T ss_pred ecccccccccccceEEEEEecccchhhcCHHHHHHHHHHHhcCCCCCeE
Confidence 66543 33457999999999765 6778888865 9999999999885
No 4
>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
Probab=99.51 E-value=1.3e-14 Score=144.53 Aligned_cols=142 Identities=21% Similarity=0.240 Sum_probs=98.5
Q ss_pred CcceecCCHHHHHHh-hccccCCHHHHHHHHHhcccccCCCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhh
Q 005170 189 EKNFVRADPSYLQTL-GQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 267 (710)
Q Consensus 189 ~~~~~~v~p~~L~~l-st~~~~~~~~AIaELIDNS~DA~A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l 267 (710)
.|.|..+++...+.+ |.+.+.+|..||+|||+||+||+|++|.|.+. ..+...|.|.|||.||+++|+..+.
T Consensus 2 ~m~I~~L~~~~~~~i~ag~vi~~~~~~vkELveNsiDA~At~I~V~i~-------~~g~~~i~V~DnG~Gi~~~d~~~~~ 74 (218)
T d1b63a2 2 HMPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIE-------RGGAKLIRIRDNGCGIKKDELALAL 74 (218)
T ss_dssp CSCCCCCCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHTTCSEEEEEEE-------GGGTSEEEEEECSCCCCGGGHHHHH
T ss_pred CCcceECCHHHHHHhCCcCEEecHHHHHHHHHhhhhcCCCCEEEEEEE-------cCCccEEEEeeCCCCcCHHHHHhhH
Confidence 477899999999999 55667899999999999999999999999997 3456789999999999999998876
Q ss_pred hcccCCCCC--CCCCcccccCceeeee---ccccCceEEEEEeeCCCCceeEEEEeecCCCceEE-EcCcccCCCCcEEE
Q 005170 268 YFGHKQPDA--DDPNRIGRFGVGFKTG---AMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLE-IPIVSYYRKGQFME 341 (710)
Q Consensus 268 ~fG~s~k~~--~d~~~IG~fGiGfKsA---~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~~i~-VPi~~~~~~Gt~I~ 341 (710)
.-..+.|-. ++...+.. +||+.. ++....+++|.||+.+.. .++.-. +..+..... -|. -...||+|+
T Consensus 75 ~r~~TSKi~~~~dl~~~~t--~GFRGEAL~Si~~vs~l~I~s~~~~~~-~~~~~~-~~~~~~~~~~~~~--~~~~GTtV~ 148 (218)
T d1b63a2 75 ARHATSKIASLDDLEAIIS--LGFRGEALASISSVSRLTLTSRTAEQQ-EAWQAY-AEGRDMNVTVKPA--AHPVGTTLE 148 (218)
T ss_dssp STTCCSSCCSHHHHHTCCS--SCCSSCHHHHHHTTSEEEEEEECTTCS-SEEEEE-EETTTTEEEEEEE--CCCSEEEEE
T ss_pred hccccccccchhhcchhhh--hccchhHHHHhhhcCceEEeeecCCCC-ceEEEE-EEeccccceeeec--ccCCccEEE
Confidence 544433422 12233333 366643 334557899999998863 333222 222222222 222 234699887
Q ss_pred EE
Q 005170 342 LD 343 (710)
Q Consensus 342 l~ 343 (710)
+.
T Consensus 149 V~ 150 (218)
T d1b63a2 149 VL 150 (218)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 5
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=6.5e-14 Score=137.78 Aligned_cols=93 Identities=23% Similarity=0.333 Sum_probs=64.9
Q ss_pred cCCHHHHHHHHHhcccccCCCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCC--CCCCCccccc
Q 005170 208 SGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPD--ADDPNRIGRF 285 (710)
Q Consensus 208 ~~~~~~AIaELIDNS~DA~A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~--~~d~~~IG~f 285 (710)
+.+|..||+|||+||+||+|++|.|.+.. .+...|.|.|||+||++++|..++.-+.+.|. ..+...++
T Consensus 4 i~~~~~~v~ELi~NsiDA~At~I~i~i~~-------~g~~~i~V~DnG~Gi~~~dl~~~~~~~~tsk~~~~~~~~~~~-- 74 (203)
T d1h7sa2 4 VLSLSTAVKELVENSLDAGATNIDLKLKD-------YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVE-- 74 (203)
T ss_dssp ECCHHHHHHHHHHHHHHTTCSEEEEEEEG-------GGTSEEEEEECSCCCCGGGSGGGGC----------CCTTCSE--
T ss_pred EecHHHHHHHHHHHHHcCCCCEEEEEEEc-------CCEEEEEEeeCCcccCHHHhhhhhhheeeccccccccccccc--
Confidence 46899999999999999999999999862 35678999999999999999886543333331 12233333
Q ss_pred Cceeee---eccccCceEEEEEeeCCC
Q 005170 286 GVGFKT---GAMRLGKDALVLTQTADS 309 (710)
Q Consensus 286 GiGfKs---A~m~lg~~v~V~Sk~~~~ 309 (710)
+.||+. +++....+++|.|++.+.
T Consensus 75 t~GfrGeaL~si~~~s~~~i~s~~~~~ 101 (203)
T d1h7sa2 75 TFGFRGEALSSLCALSDVTISTCHASA 101 (203)
T ss_dssp EESSSSSHHHHHHHHSEEEEEEECTTC
T ss_pred ccCccchhhhhhhhccceEEEeecCCC
Confidence 334443 233445679999998886
No 6
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=99.09 E-value=3.1e-10 Score=111.96 Aligned_cols=97 Identities=23% Similarity=0.378 Sum_probs=71.1
Q ss_pred HHHHHHHHHhcccccCCC-----ccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhh-cccCCCCCCCCCcccc
Q 005170 211 IFGAIAELVDNSRDAKAT-----KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGR 284 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~A~-----~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~-fG~s~k~~~d~~~IG~ 284 (710)
+..+|+|||+||+||.++ .+.|.|.... ...+...|.|.|||+||+++++..++. |.++.+. ......|.
T Consensus 23 L~~~l~eLi~Naida~~~~~~~~~i~i~i~~~~---~~~~~~~i~V~DnG~Gi~~~~~~~~f~~~~~s~~~-~~~~~~G~ 98 (219)
T d2hkja3 23 LYQTVRELIENSLDATDVHGILPNIKITIDLID---DARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY-VNRQTRGM 98 (219)
T ss_dssp HHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEE---TTTTEEEEEEEECSCCCCGGGHHHHHHCCCSSCCC-CCSCCSCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEEEEec---CCCCEEEEEEEcCCCCCCHHHHHhhccceEecccc-ccccccCc
Confidence 678999999999999763 4555554321 123345789999999999999999885 5555442 34567899
Q ss_pred cCceeeeecc----ccCceEEEEEeeCCCCc
Q 005170 285 FGVGFKTGAM----RLGKDALVLTQTADSRS 311 (710)
Q Consensus 285 fGiGfKsA~m----~lg~~v~V~Sk~~~~~s 311 (710)
+|+|+..+.. ..|..+.|.|+..+...
T Consensus 99 ~GlGl~~~~~~s~~~~g~~i~V~S~~~~~~~ 129 (219)
T d2hkja3 99 YGLGVKAAVLYSQMHQDKPIEIETSPVNSKR 129 (219)
T ss_dssp CTTTHHHHHHHHHHHCCCCEEEEEECTTCSE
T ss_pred cCHHHHHHHHHHHHcCCcEEEEEEEecCCCc
Confidence 9999986543 34667999999887644
No 7
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]}
Probab=98.02 E-value=3.7e-06 Score=78.47 Aligned_cols=89 Identities=16% Similarity=0.115 Sum_probs=62.8
Q ss_pred HHHHHHHHHhcccccCCCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCCCCCcccccCceee
Q 005170 211 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFK 290 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~d~~~IG~fGiGfK 290 (710)
+..+|..||+||+.+....|.|.+.. ..+.-.|+|.|||.||+++++.++|.-.+.... ....+..|+|+.
T Consensus 48 l~~vl~NLi~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~~---~~~~~g~GLGL~ 118 (161)
T d1bxda_ 48 IKRAVANMVVNAARYGNGWIKVSSGT------EPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDS---ARTISGTGLGLA 118 (161)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEE------ETTEEEEEEEEESSCSCTTGGGCSSCCCCCCSC---CCCCCCCSCCCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEEE------eCCEEEEEEEEcCCCCCHHHHHHHhCCceECCC---CCcCCCCCchHH
Confidence 44789999999999987788887764 234567999999999999999998863232221 122355799985
Q ss_pred ee---ccccCceEEEEEeeCC
Q 005170 291 TG---AMRLGKDALVLTQTAD 308 (710)
Q Consensus 291 sA---~m~lg~~v~V~Sk~~~ 308 (710)
.+ .-..|.++.|.|...+
T Consensus 119 ivk~iv~~hgG~i~v~s~~~~ 139 (161)
T d1bxda_ 119 IVQRIVDNHNGMLELGTSERG 139 (161)
T ss_dssp TTHHHHHHHTSEEEEEEETTT
T ss_pred HHHHHHHHCCCEEEEEEcCCC
Confidence 32 2246778888776543
No 8
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.99 E-value=1.7e-05 Score=78.80 Aligned_cols=87 Identities=16% Similarity=0.245 Sum_probs=58.7
Q ss_pred HHHHHHHHHhccccc-----CCCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHH--------hhhh-cccCCCCC
Q 005170 211 IFGAIAELVDNSRDA-----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV--------RMTY-FGHKQPDA 276 (710)
Q Consensus 211 ~~~AIaELIDNS~DA-----~A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~--------~~l~-fG~s~k~~ 276 (710)
+...+-|+|+||+|. ..+.|.|.|+. ....|+|.|||.||+-+.-. -+|+ +..+.+-.
T Consensus 54 l~ki~dEil~Na~D~~~r~~~~~~I~v~i~~--------~~~si~V~d~GrGIPv~~h~~~~~~~~e~ift~l~ag~nfd 125 (239)
T d1pvga2 54 LFKIFDEILVNAADNKVRDPSMKRIDVNIHA--------EEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 125 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEEET--------TTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCC
T ss_pred ceeecceeeecccchhhhccccceEEEEEeC--------CCCEEEEEecCcceeeeeccccccchhheeeEeeccccccc
Confidence 456788999999995 34778888762 35789999999999875321 1222 22222221
Q ss_pred --CCCCcccccCceeeeeccccCceEEEEEee
Q 005170 277 --DDPNRIGRFGVGFKTGAMRLGKDALVLTQT 306 (710)
Q Consensus 277 --~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~ 306 (710)
......|..|+|.+. .-.|+..++|.+..
T Consensus 126 ~~~~k~sgGlnGvG~~v-vNalS~~f~vev~~ 156 (239)
T d1pvga2 126 DDEKKVTGGRNGYGAKL-CNIFSTEFILETAD 156 (239)
T ss_dssp TTSCCCCSCCSSCHHHH-HHHTEEEEEEEEEE
T ss_pred cccceeeCCeeccceee-hhhhhHhhheeeEE
Confidence 225678999999954 44488888877753
No 9
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
Probab=97.77 E-value=3.5e-05 Score=75.08 Aligned_cols=121 Identities=16% Similarity=0.161 Sum_probs=75.3
Q ss_pred HHHHHHHHHhcccccC----CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHH--------hhhh-cccCCC--C
Q 005170 211 IFGAIAELVDNSRDAK----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV--------RMTY-FGHKQP--D 275 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~----A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~--------~~l~-fG~s~k--~ 275 (710)
+...+-|+|+||+|.. ++.|.|.+. ....++|.|||.||+-+.-. -+|+ +..+.+ .
T Consensus 27 l~~l~~Eil~Na~De~~~~~~~~i~v~~~---------~dg~i~V~ddG~GIpv~~h~~~~~~~~e~if~~l~~~~~~d~ 97 (212)
T d1kija2 27 YHHLFKEILDNAVDEALAGYATEILVRLN---------EDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ 97 (212)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEEEEEEC---------TTSCEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEESGGGG
T ss_pred hhhhhhhhhhhhhhhhhhcCCceEEEEEc---------CCCcEEEEECCcccccccccccCcceEEEEEEEEcccccccC
Confidence 5577899999999973 566666654 24579999999999875421 1121 111122 1
Q ss_pred CCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCc--eEEEcC-cccCCCCcEEEEEec
Q 005170 276 ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NLEIPI-VSYYRKGQFMELDTV 345 (710)
Q Consensus 276 ~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~--~i~VPi-~~~~~~Gt~I~l~~~ 345 (710)
.......|..|+|.+ +.-.++..+.|.+++.+. .+.++|..|.. ....+. ......||+|+....
T Consensus 98 ~~~~~sgG~hGvGa~-vvNalS~~~~v~v~r~~k----~~~~~f~~g~~~~~~~~~~~~~~~~~GT~ItF~PD 165 (212)
T d1kija2 98 GAYKVSGGLHGVGAS-VVNALSEWTVVEVFREGK----HHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPD 165 (212)
T ss_dssp SSCCCCSCSSTTSHH-HHHHTEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECGGGCCEEEEEEEEC
T ss_pred CCceecCCCccccce-EEEEeccceEEEEEEecc----eeeeEEeccccCCcceEccccCCCCccEEEEEEEc
Confidence 123567899999994 455589999999998774 34455544422 221111 222345888876553
No 10
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=97.75 E-value=2.3e-05 Score=71.80 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=60.3
Q ss_pred HHHHHHHHHhcccccCCCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCCCCCcccccCceee
Q 005170 211 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFK 290 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~d~~~IG~fGiGfK 290 (710)
+..+|..||+||+.+....|.|.+.. .++.-.|+|.|||.||+++++.++|.-.+..... .+-.|+|+.
T Consensus 45 l~~vl~NLl~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~iF~~F~r~~~~-----~~G~GLGL~ 113 (146)
T d1id0a_ 45 FVEVMGNVLDNACKYCLEFVEISARQ------TDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTL-----RPGQGVGLA 113 (146)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEEEE------CSSCEEEEEEESSSCCCGGGTTGGGSCCCCTTCC-----CTTCCSCHH
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEEe------eCCEEEEEEEeeCCCCCHHHHHHHcCCcccCCCC-----CCCeeHHHH
Confidence 55789999999999998888888764 3455679999999999999999998633322211 123688874
Q ss_pred ee---ccccCceEEEEEee
Q 005170 291 TG---AMRLGKDALVLTQT 306 (710)
Q Consensus 291 sA---~m~lg~~v~V~Sk~ 306 (710)
-+ .=+.|.++.|.|..
T Consensus 114 I~k~iv~~h~G~i~~~s~~ 132 (146)
T d1id0a_ 114 VAREITEQYEGKIVAGESM 132 (146)
T ss_dssp HHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHcCCEEEEEEcC
Confidence 22 12456777776644
No 11
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.71 E-value=2.5e-05 Score=71.65 Aligned_cols=87 Identities=17% Similarity=0.116 Sum_probs=54.4
Q ss_pred HHHHHHHHHhcccccC-CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCCCCCcccccCcee
Q 005170 211 IFGAIAELVDNSRDAK-ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGF 289 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~-A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~d~~~IG~fGiGf 289 (710)
+..+|..||+||+.++ +..|.|.+.. ..+.-.|.|.|||.||+++++.++|.-.+.... ...+-.|+|+
T Consensus 45 l~~vl~NLl~NAiky~~~~~I~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~ife~f~r~~~----~~~~G~GLGL 114 (148)
T d1ysra1 45 LRLAVDNAIANAVKHGGATLVQLSAVS------SRAGVEIAIDDNGSGVPEGERQVVFERFSRGST----ASHSGSGLGL 114 (148)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEEE------ETTEEEEEEEESSSCCCGGGHHHHHTSCC---------------CCC
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhcCccccCCC----CCCCCccHHH
Confidence 4578999999999975 4456665543 234568899999999999999998862222111 1123358887
Q ss_pred eee---ccccCceEEEEEeeC
Q 005170 290 KTG---AMRLGKDALVLTQTA 307 (710)
Q Consensus 290 KsA---~m~lg~~v~V~Sk~~ 307 (710)
..+ .-..|.++.+.|...
T Consensus 115 ~i~~~iv~~hgG~i~~~s~~~ 135 (148)
T d1ysra1 115 ALVAQQAQLHGGTASLENSPL 135 (148)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHcCCEEEEEEcCC
Confidence 422 224677777777553
No 12
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.67 E-value=1.6e-05 Score=75.36 Aligned_cols=90 Identities=23% Similarity=0.358 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcccccC----------CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCC---
Q 005170 211 IFGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDAD--- 277 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~----------A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~--- 277 (710)
+..+|..||+||++|. ...|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+...
T Consensus 54 l~qvl~NLl~NAi~~t~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~iF~~f~tt~~~~~~~ 127 (193)
T d1gkza2 54 LDYILPELLKNAMRATMESHLDTPYNVPDVVITIAN------NDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQD 127 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEEE------CSSEEEEEEECCSCCCCTTTTTTTTSTTCCCC------
T ss_pred HHHHHHHHHHHHHHhcccCceeeccccceEEEEEEc------cCCEEEEEEecCCCCCCHHHHHHhcCCceecccccccc
Confidence 4578999999999982 2356666653 34566889999999999999999997655544211
Q ss_pred ----------------CCCcccccCceeeee---ccccCceEEEEEee
Q 005170 278 ----------------DPNRIGRFGVGFKTG---AMRLGKDALVLTQT 306 (710)
Q Consensus 278 ----------------d~~~IG~fGiGfKsA---~m~lg~~v~V~Sk~ 306 (710)
....+.-.|+|+..+ .-..|.++.|.|..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~G~GlGL~i~k~ive~~gG~i~v~S~~ 175 (193)
T d1gkza2 128 PRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 175 (193)
T ss_dssp -------------------CCSCSSCHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccccccccccccccccccccCCcCHHHHHHHHHHCCCEEEEEecC
Confidence 011223467887422 12356777777754
No 13
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=97.63 E-value=3.2e-05 Score=73.74 Aligned_cols=90 Identities=16% Similarity=0.286 Sum_probs=60.3
Q ss_pred HHHHHHHHHhcccccC---------CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCC----
Q 005170 211 IFGAIAELVDNSRDAK---------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDAD---- 277 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~---------A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~---- 277 (710)
+..+|.+|++||++|. .+.|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+...
T Consensus 61 l~qvl~NLl~NA~~~~~~~~~~~~~~~~I~v~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~f~~~~~~~~~~~ 134 (190)
T d1jm6a2 61 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL------GEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGT 134 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCTTSCCCEEEEEEE------CSSEEEEEEEECSCCCCGGGTTGGGCTTCCCSCCC----
T ss_pred HHHHHHHHHHHHHHHhhccCccccccceEEEEEEe------CCeEEEEEEeccCCCCCHHHHHHHhCcceecCCcCcCcc
Confidence 4578999999999872 2347777653 34567899999999999999999997544433211
Q ss_pred CCCcccccCceeeeec---cccCceEEEEEee
Q 005170 278 DPNRIGRFGVGFKTGA---MRLGKDALVLTQT 306 (710)
Q Consensus 278 d~~~IG~fGiGfKsA~---m~lg~~v~V~Sk~ 306 (710)
.....+-.|+|+..+- =..|.++.|.|..
T Consensus 135 ~~~~~~G~GLGL~i~k~ive~hgG~I~v~s~~ 166 (190)
T d1jm6a2 135 GGTPLAGFGYGLPISRLYAKYFQGDLQLFSME 166 (190)
T ss_dssp -----CCSSCHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccCCCCccHHHHHHHHHHCCCEEEEEecC
Confidence 1223456788885332 1467778887754
No 14
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]}
Probab=97.57 E-value=6.2e-05 Score=71.02 Aligned_cols=140 Identities=18% Similarity=0.173 Sum_probs=82.8
Q ss_pred HHHHHHHhccccc----CCCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCCCCCcccccCce
Q 005170 213 GAIAELVDNSRDA----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVG 288 (710)
Q Consensus 213 ~AIaELIDNS~DA----~A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~d~~~IG~fGiG 288 (710)
-.|.|+||||+|. .++.|.|.+. ....++|.|||.||+-+-- .+ .|..++.
T Consensus 8 Hlv~EivDNsiDEa~aG~~~~I~V~l~---------~D~si~V~D~GRGIPvd~h---------~~-------~~~~~~e 62 (168)
T d1s14a_ 8 HLGQEVIDNSVDEALAGHAKRVDVILH---------ADQSLEVIDDGRGMPVDIH---------PE-------EGVPAVE 62 (168)
T ss_dssp HHHHHHHHHHHHHHHTTSCSEEEEEEC---------TTSCEEEEECSSCCCCSBC---------TT-------TCSBHHH
T ss_pred eEEeeeeecHHHHHHcCCCCEEEEEEe---------CCCeEEEEEEecccceeee---------cc-------CCCchhh
Confidence 4689999999996 3788888875 2468999999999985320 00 1111111
Q ss_pred --ee-eeccccCceEEEEEeeCCCCceeEEEEeecCCCc--eE-EEcCcccCCCCcEEEEEecCcccchhhhhHHhHhhh
Q 005170 289 --FK-TGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NL-EIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEF 362 (710)
Q Consensus 289 --fK-sA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~--~i-~VPi~~~~~~Gt~I~l~~~~~~e~~~~~~L~~I~ky 362 (710)
|- |+.-+|...+.|.++++|. .+.+.|..|.- .+ .+....-...||.|.....+. |.+-
T Consensus 63 ~v~t~SVVNALS~~l~v~v~RdGk----~~~q~f~~G~~~~~l~~~~~~~~~~tGT~I~F~PD~~-----------IF~~ 127 (168)
T d1s14a_ 63 LILCISVVNALSKRVEVNVRRDGQ----VYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDET-----------FFDS 127 (168)
T ss_dssp HHHHTSHHHHHEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEECGG-----------GSSC
T ss_pred ccCceeEeeeccCeEEEEEEECCE----EEEEEECCCccCCcccceeecccCCCcEEEEEeeccc-----------eecc
Confidence 10 4445789999999999884 45677766532 22 122222334699887665432 2222
Q ss_pred CCCchhhHHHhhccccCCCCCcEEEEEecc
Q 005170 363 SPFNKYLIGEKAGLFQDKCTGTQIYIWNLD 392 (710)
Q Consensus 363 SpF~s~pI~e~~~~~~~~~~GT~IiI~nL~ 392 (710)
.-|...-|.+.+....--..|.+|.+.+-+
T Consensus 128 ~~f~~~~l~~rlre~AfLn~GL~I~l~Der 157 (168)
T d1s14a_ 128 PRFSVSRLTHVLKAKAVLCPGVEITFKDEI 157 (168)
T ss_dssp CSCCHHHHHHHHHHHHHHSTTCEEEEEETT
T ss_pred ccccHHHHHHHHHHHhhcCCCCEEEEEEcC
Confidence 233333333333322212579999988754
No 15
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=97.56 E-value=7.3e-05 Score=73.26 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcccccC----CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhh--------HHhhhh-cccCCC--C
Q 005170 211 IFGAIAELVDNSRDAK----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQD--------VVRMTY-FGHKQP--D 275 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~----A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~ed--------l~~~l~-fG~s~k--~ 275 (710)
+.--+-|+|+||+|.. +..|.|.+. ....|+|.|||.||+-+. ..-+|+ +..+.+ .
T Consensus 35 l~~l~~Eil~Na~De~~~~~~~~i~v~i~---------~dgsIsV~ddGrGIPv~~h~~~~~~~~e~if~~l~tg~~fd~ 105 (219)
T d1ei1a2 35 LHHMVFEVVDNAIDEALAGHCKEIIVTIH---------ADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDD 105 (219)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEEC---------TTSCEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTEESCSSS
T ss_pred chhhhHhHhhhhhhhhcCCCccceeEEEc---------CCCeEEEEECCccccccccCccCCchhhhhhhhhhhccCCCC
Confidence 6678899999999972 466666554 236799999999999764 223333 222222 1
Q ss_pred CCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCc--eEEEcCcccCCCCcEEEEEec
Q 005170 276 ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NLEIPIVSYYRKGQFMELDTV 345 (710)
Q Consensus 276 ~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~--~i~VPi~~~~~~Gt~I~l~~~ 345 (710)
....-..|..|+|.+. .-.+++.+.|.+++.+. .+.++|..|.. ...+ +..-...||+|.....
T Consensus 106 ~~~~~sgG~nGvG~~~-~NalS~~f~v~~~r~g~----~y~q~f~~g~~~~~~~~-~~~~~~~gT~I~F~PD 171 (219)
T d1ei1a2 106 NSYKVSGGLHGVGVSV-VNALSQKLELVIQREGK----IHRQIYEHGVPQAPLAV-TGETEKTGTMVRFWPS 171 (219)
T ss_dssp SSCSSCSCCSSCHHHH-HHHTEEEEEEEEEETTE----EEEEEEETTEESSCCEE-EEECSCCEEEEEEEEC
T ss_pred CcceeEcCccccceeE-EEEeeeEEEEEEEECCE----EEEEEEeCCeECCCcee-ccCcCCCCEEEEEEEC
Confidence 2235677999999954 44589999999988764 34566644321 1111 1123356888876654
No 16
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=97.55 E-value=4.2e-05 Score=70.83 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcccccCC---C--ccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhh-cccCCCCCCCCCcccc
Q 005170 211 IFGAIAELVDNSRDAKA---T--KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGR 284 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~A---~--~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~-fG~s~k~~~d~~~IG~ 284 (710)
+..+|..||+||+.+.. . .|.|.+.. ..+.-.|+|.|||.||+++++.++|. |-..... .....+-
T Consensus 50 l~qvl~NLi~NAik~t~~~~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~F~~~~~~--~~~~~~G 121 (161)
T d2c2aa2 50 IRQVLLNLLNNGVKYSKKDAPDKYVKVILDE------KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSS--LTYEVPG 121 (161)
T ss_dssp HHHHHHHHHHHHHHTCCTTCTTCEEEEEEEE------ETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC-----------
T ss_pred HHHHHHHHHHHHHHhhhcCCCcceeeEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhhCCcEEcCCC--CCCCCCc
Confidence 44789999999998853 2 34444442 23456899999999999999999986 4332221 1122334
Q ss_pred cCceeeee---ccccCceEEEEEeeC
Q 005170 285 FGVGFKTG---AMRLGKDALVLTQTA 307 (710)
Q Consensus 285 fGiGfKsA---~m~lg~~v~V~Sk~~ 307 (710)
.|+|+..+ .-..|.++.|.|...
T Consensus 122 ~GLGL~i~k~iv~~hgG~i~v~s~~~ 147 (161)
T d2c2aa2 122 TGLGLAITKEIVELHGGRIWVESEVG 147 (161)
T ss_dssp CCCTHHHHHHHHHHTTCEEEEEEETT
T ss_pred ccHHHHHHHHHHHHCCCEEEEEecCC
Confidence 58887432 224678888877654
No 17
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.35 E-value=0.00011 Score=63.52 Aligned_cols=51 Identities=25% Similarity=0.338 Sum_probs=38.5
Q ss_pred HHHHHHHHHhcccccC----------CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhh
Q 005170 211 IFGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 267 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~----------A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l 267 (710)
+..++..||+||++|. ...|.|.+.. ..+.-.|+|.|||.||+++++.++|
T Consensus 65 l~qvl~NLl~NAi~~~~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~IF 125 (125)
T d1y8oa2 65 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTL------GKEDLSIKISDLGGGVPLRKIDRLF 125 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCCCEEEEEEE------CSSEEEEEEEECSCCCCHHHHGGGG
T ss_pred HHHHHHHHHHHHHHhhhccccccCCCceeEEEEeec------CCCEEEEEEEEeCCCcCHHHHcccC
Confidence 3467889999999882 2456666553 3456788999999999999998764
No 18
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.75 E-value=0.00075 Score=60.67 Aligned_cols=83 Identities=18% Similarity=0.235 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcccccC-----CCccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCCCCCccccc
Q 005170 211 IFGAIAELVDNSRDAK-----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRF 285 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~-----A~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~d~~~IG~f 285 (710)
...|+.||+.||+.++ ...|.|.+.. ..+.-.|.|.|||.||+. +...+.-..+.+. ..+.-
T Consensus 40 i~~av~E~v~Nai~ha~~~~~~~~I~i~~~~------~~~~l~i~i~D~G~gi~~--~~~~~~~~~~~~~-----~~~~~ 106 (139)
T d1th8a_ 40 IKTVVSEAVTNAIIHGYNNDPNGIVSISVII------EDGVVHLTVRDEGVGIPD--IEEARQPLFTTKP-----ELERS 106 (139)
T ss_dssp HHHHHHHHHHHHHHTTSTTCTTSEEEEEEEE------ETTEEEEEEEECSSCCSC--HHHHTCCC------------CCC
T ss_pred HHHHHHHhhhhhhheecCCCCCcEEEEEEEE------ecCEEEEEEccccccccc--ccccccccceecc-----cCCCc
Confidence 4579999999999874 2356666653 245678999999999974 3344321111111 11223
Q ss_pred CceeeeeccccCceEEEEEeeC
Q 005170 286 GVGFKTGAMRLGKDALVLTQTA 307 (710)
Q Consensus 286 GiGfKsA~m~lg~~v~V~Sk~~ 307 (710)
|+|+.. .-++++++.|.|...
T Consensus 107 GlGL~i-v~~l~d~i~i~s~~~ 127 (139)
T d1th8a_ 107 GMGFTI-MENFMDEVIVESEVN 127 (139)
T ss_dssp SCHHHH-HHHHSSEEEEEEETT
T ss_pred hHHHHH-HHHhCCEEEEEEcCC
Confidence 888742 235677887777643
No 19
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.66 E-value=0.00013 Score=66.89 Aligned_cols=87 Identities=13% Similarity=0.113 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcccccCCCcc---EE------EEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccCCCCCCCCCc
Q 005170 211 IFGAIAELVDNSRDAKATKL---EI------SIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNR 281 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~A~~I---~I------~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s~k~~~d~~~ 281 (710)
+..+|..||+||++|....= .+ .+.. ........-.|.|.|||.||+++++.+++.-.++.+.
T Consensus 45 l~qvl~NLl~NA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~G~Gi~~~~~~~iF~pf~s~k~------ 116 (156)
T d1r62a_ 45 IEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTL--HGERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGRE------ 116 (156)
T ss_dssp HHHHHHHHHHHHHHHHGGGCEEEEEEEEEEEEEEE--TTEEEEEEEEEEEEEECTTC-----------------------
T ss_pred HHHHHHHHHHHHHHhhhcCCCceeeeccccceeee--ccccCCceEEEEEecCCCCCCHHHHHhhcccceecCC------
Confidence 45789999999999853211 11 1100 0000112346899999999999999998864444332
Q ss_pred ccccCceeeeec---cccCceEEEEEee
Q 005170 282 IGRFGVGFKTGA---MRLGKDALVLTQT 306 (710)
Q Consensus 282 IG~fGiGfKsA~---m~lg~~v~V~Sk~ 306 (710)
+-.|+|+..+- =+.|..+.|.|..
T Consensus 117 -~G~GLGL~i~~~iv~~hgG~i~v~s~~ 143 (156)
T d1r62a_ 117 -GGTGLGLSIARNLIDQHSGKIEFTSWP 143 (156)
T ss_dssp ----CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred -CCCCchHHHHHHHHHHCCCEEEEEEeC
Confidence 23488874321 1467788887754
No 20
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]}
Probab=96.59 E-value=0.00061 Score=60.66 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcccccCC----CccEEEEEeeecccCCCCcCEEEEEeCCCCCChhhHHhhhhcccC
Q 005170 211 IFGAIAELVDNSRDAKA----TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHK 272 (710)
Q Consensus 211 ~~~AIaELIDNS~DA~A----~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~edl~~~l~fG~s 272 (710)
...++..||+||++|.. ....|.+... ...+.-.|+|.|||.||+++.+.++|.-|+.
T Consensus 98 l~qvl~Nll~NAi~~~~~~~~~~~~I~i~~~----~~~~~~~i~v~D~G~gi~~e~l~~if~~~y~ 159 (179)
T d1ixma_ 98 LAKLMRKLFHLFDQAVSRESENHLTVSLQTD----HPDRQLILYLDFHGAFADPSAFDDIRQNGYE 159 (179)
T ss_dssp HHHHHHHHHHHHHHHBCTTSCCEEEEEEECC----CSSSSCEEEEEEESCBSCGGGCC--------
T ss_pred hHHHHHHHHHHHHHHhhhccccchhhhhhhc----ccccEEEEEEEeCCCCcCHHHHHHHHHhccc
Confidence 45788999999999843 3344555421 1456789999999999999999999876664
No 21
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=87.08 E-value=0.12 Score=39.88 Aligned_cols=35 Identities=17% Similarity=0.431 Sum_probs=23.9
Q ss_pred CCCCceeeCccchhhccCCC-CCCC--CCCCCCceecC
Q 005170 597 KPDQEWVQCNKCRKWRMLDP-GFDT--KSLPVEWFCYM 631 (710)
Q Consensus 597 ~~~~~WVQCd~C~KWR~Lp~-~~~~--~~lp~~W~C~~ 631 (710)
..+..|||||.|.+|-..-= ++.. ....+.|+|..
T Consensus 17 ~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~ 54 (64)
T d1we9a_ 17 AADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPS 54 (64)
T ss_dssp CSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHH
T ss_pred CCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcC
Confidence 34568999999999987652 2322 23457899853
No 22
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=84.28 E-value=0.29 Score=38.46 Aligned_cols=33 Identities=21% Similarity=0.796 Sum_probs=24.0
Q ss_pred CCCceeeCccchhhccCC-CCCC-CCCCCCCceec
Q 005170 598 PDQEWVQCNKCRKWRMLD-PGFD-TKSLPVEWFCY 630 (710)
Q Consensus 598 ~~~~WVQCd~C~KWR~Lp-~~~~-~~~lp~~W~C~ 630 (710)
....|||||.|.+|-.+. .++. ....++.|+|.
T Consensus 27 ~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~ 61 (72)
T d1weea_ 27 DGERMLACDGCGVWHHTRCIGINNADALPSKFLCF 61 (72)
T ss_dssp CSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCH
T ss_pred CCCeEEEeCCCCCcCchhhcCCccccCCCCcEECc
Confidence 345799999999999885 2332 23456899985
No 23
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.08 E-value=0.084 Score=42.72 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=23.4
Q ss_pred CCCCceeeCccchhhccCC-CCCCC--CCCCCCceecC
Q 005170 597 KPDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 631 (710)
Q Consensus 597 ~~~~~WVQCd~C~KWR~Lp-~~~~~--~~lp~~W~C~~ 631 (710)
.++..|||||.|..|-... .++.. ...++.|+|..
T Consensus 22 ~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~ 59 (79)
T d1wepa_ 22 NVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPD 59 (79)
T ss_dssp CSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTT
T ss_pred CCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECcc
Confidence 3466899999999998765 12221 23456798864
No 24
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.70 E-value=0.96 Score=35.46 Aligned_cols=32 Identities=19% Similarity=0.569 Sum_probs=20.9
Q ss_pred CCceeeCccchhhccCCC-CCCC------CCCCCCceec
Q 005170 599 DQEWVQCNKCRKWRMLDP-GFDT------KSLPVEWFCY 630 (710)
Q Consensus 599 ~~~WVQCd~C~KWR~Lp~-~~~~------~~lp~~W~C~ 630 (710)
+..|||||.|.+|=.+.= ++.. ...++.|+|.
T Consensus 27 ~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~ 65 (76)
T d1wema_ 27 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP 65 (76)
T ss_dssp SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCH
T ss_pred CCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECC
Confidence 457999999999976541 2211 1235679885
No 25
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.00 E-value=3.9 Score=30.67 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=21.9
Q ss_pred CCceeeCccchhhccCCC-CCCCCC-CCCCceecC
Q 005170 599 DQEWVQCNKCRKWRMLDP-GFDTKS-LPVEWFCYM 631 (710)
Q Consensus 599 ~~~WVQCd~C~KWR~Lp~-~~~~~~-lp~~W~C~~ 631 (710)
...+|+||.|.+|=.+.= ...... ..+.|+|..
T Consensus 18 ~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~ 52 (61)
T d1mm2a_ 18 GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPR 52 (61)
T ss_dssp CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTT
T ss_pred CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCC
Confidence 447999999999977652 111122 235899975
No 26
>d1ow1a_ b.131.1.3 (A:) SMART/HDAC1 associated repressor protein, SHARP {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.50 E-value=12 Score=34.03 Aligned_cols=53 Identities=28% Similarity=0.610 Sum_probs=37.5
Q ss_pred CCCccccccCCCCCchhhhHH--------HHHHHhhcCCeEEEEEece-------eEEEEeCCCCCCCCccc
Q 005170 68 GMSHCFLSPAPECSRDHNEWR--------RFLIYLQGRDMVAIAKFKF-------WEFYILPPDQTSNFTNI 124 (710)
Q Consensus 68 ~~~~~~~~p~~~~~~~~~ew~--------~f~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 124 (710)
-..||+|--.| +.++..++. -|.+||+.-.-.|||.+.. .-+|||||- +|+|-
T Consensus 76 ~~~~c~lLAlp-~~~~~~d~~~q~~~l~~~lV~YLkqKqAAGVI~l~~~~~~~~~~VLh~FPPC---eFs~~ 143 (170)
T d1ow1a_ 76 ETDYCLLLALP-CGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPC---EFSES 143 (170)
T ss_dssp TTTEEEEEEEE-CCSSHHHHHHHHHHHHHHTHHHHHHHTEEEEEEECCTTCCSCCEEEEEECSS---HHHHH
T ss_pred CCCceEEEEee-CCCCccccchhhhHHHHHHHHHHHHhccCceEecCCCCCCCceEEEEecCCc---HHHHH
Confidence 36777664444 333444444 4999999999999998873 689999996 45553
No 27
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.29 E-value=6 Score=28.33 Aligned_cols=29 Identities=31% Similarity=0.714 Sum_probs=19.2
Q ss_pred CceeeCccchhhccCC---CCCCCCCCC-CCceec
Q 005170 600 QEWVQCNKCRKWRMLD---PGFDTKSLP-VEWFCY 630 (710)
Q Consensus 600 ~~WVQCd~C~KWR~Lp---~~~~~~~lp-~~W~C~ 630 (710)
..+|+||.|.+|=.+. ... ...| +.|+|.
T Consensus 13 ~~~i~Cd~C~~~~H~~C~~p~~--~~~p~~~W~C~ 45 (51)
T d1f62a_ 13 DKLILCDECNKAFHLFCLRPAL--YEVPDGEWQCP 45 (51)
T ss_dssp SCCEECTTTCCEECHHHHCTTC--CSCCSSCCSCT
T ss_pred CCEEEcCCCCCCCCCCCCCCCC--CcCCCCCEECc
Confidence 4789999999996652 111 1222 489996
No 28
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.25 E-value=12 Score=29.70 Aligned_cols=33 Identities=21% Similarity=0.548 Sum_probs=21.2
Q ss_pred CCceeeCccchhhccCCC---CCC--CCCCCC-CceecC
Q 005170 599 DQEWVQCNKCRKWRMLDP---GFD--TKSLPV-EWFCYM 631 (710)
Q Consensus 599 ~~~WVQCd~C~KWR~Lp~---~~~--~~~lp~-~W~C~~ 631 (710)
...+|+||.|..|=.+.= .+. ....|+ .|||..
T Consensus 30 ~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~ 68 (88)
T d1weva_ 30 GNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCAR 68 (88)
T ss_dssp TCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHH
T ss_pred CCeEEEcCCCCCccccccCCCcccccccccCCCeEECcc
Confidence 347999999999976542 111 112333 899965
No 29
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.45 E-value=7.8 Score=30.31 Aligned_cols=31 Identities=23% Similarity=0.763 Sum_probs=19.6
Q ss_pred ceeeC--ccchhhccCC-CCC------CCCCCCCCceecC
Q 005170 601 EWVQC--NKCRKWRMLD-PGF------DTKSLPVEWFCYM 631 (710)
Q Consensus 601 ~WVQC--d~C~KWR~Lp-~~~------~~~~lp~~W~C~~ 631 (710)
.+||| +.|..|=... -++ .....|+.|+|..
T Consensus 29 ~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~ 68 (78)
T d1wewa_ 29 SMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEI 68 (78)
T ss_dssp CEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHH
T ss_pred cEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCC
Confidence 45555 5899998754 111 2245778899953
Done!