BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005174
(710 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 517/677 (76%), Gaps = 5/677 (0%)
Query: 39 NLLETLKDFAGRGNLSKAFEAFTRIRI---TAASHDVVLDSFAHIIFCCGKVKALAQGKQ 95
+L ++L A G+L AF+ F+ +R+ +A S D+VL S A ++ C V+A G Q
Sbjct: 5 SLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQ 64
Query: 96 LHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGF 155
+HA I+ G+E + VLVPKLVTFY++F+L+N A ++ENS+I +PLPWN+LI+ Y ++
Sbjct: 65 VHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNEL 124
Query: 156 YAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID-ACHEWSLFVHNA 214
+ E + YK+M S+ IR D FTYPSVLKACGE +DV FGRVVH I+ + ++ SL+V NA
Sbjct: 125 FEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNA 184
Query: 215 LVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVN 274
L+SMY +F + +ARRLFD+M ERDAVSWN +I+ YAS+G+W EAF+LF +M GVEV+
Sbjct: 185 LISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVS 244
Query: 275 VITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHG 334
VITWN I+GGCL+TGN+ G L L+SRMR T LD VA +IGL ACS +GA++LGKEIHG
Sbjct: 245 VITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHG 304
Query: 335 SAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEE 394
A+ Y +NVRN LITMYS+CKDLRHA I+F+ T E S+ TWNS++SGY L+ +EE
Sbjct: 305 LAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEE 364
Query: 395 SAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLV 454
++ L REM +G +PN +T+ASILPLCAR+ANLQHGKEFHCYILRR F ++ +LWNSLV
Sbjct: 365 ASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLV 424
Query: 455 EMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHV 514
++YA+SGK+ AK V DLMS+RDEVTYTSLI GYG QGEG VAL LF+EM ++ IKPDHV
Sbjct: 425 DVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHV 484
Query: 515 TMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITK 574
T+VAVLSACSHS LV EG++ F +M YGI P L+HF+CMVDLYGRAG L KAK+II
Sbjct: 485 TVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHN 544
Query: 575 MPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKL 634
MPY P+ A WATLL AC IH NT IG+WAAEKLLE +PEN GYYVLIANMYAA G W KL
Sbjct: 545 MPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKL 604
Query: 635 AKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKD-AGY 693
A+VRT MRDLGV+K PGCAW+D + FS F V DTS+ +A YPLL GL +LMKD AGY
Sbjct: 605 AEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGY 664
Query: 694 VVKEEFCSEEEIVEEIG 710
+ + S+EE+++E+G
Sbjct: 665 AINKVQSSDEELLQEMG 681
>sp|Q4V389|PPR55_ARATH Pentatricopeptide repeat-containing protein At1g22830
OS=Arabidopsis thaliana GN=PCMP-E24 PE=2 SV=1
Length = 703
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/721 (51%), Positives = 491/721 (68%), Gaps = 34/721 (4%)
Query: 1 MPPSSSRLILNGLSVSQLEKFIPKKWKQ---PI-------NNEHIMRINLLETLKDFAGR 50
MP S SR IL GL+VS++ KFIP+ WKQ PI ++E + ++ L + +
Sbjct: 1 MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQV-LFNSFRHCISH 59
Query: 51 GNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPV 110
G L +AF F+ +R + SH+ VL S A ++ C G+QLHA I+ GLE + V
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 111 LVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRR 170
LVPKLVTFY++F+L + A + ENS I +PLPWN+LI Y+R+ + E++ VYK+M S+
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 171 IRGDNFTYPSVLKACGEMMDVDFGRVVHSCID-ACHEWSLFVHNALVSMYGKFGQVDVAR 229
IR D FTYPSV+KAC ++D +GRVVH I+ + H +L+V NAL+SMY +FG+VDVAR
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 230 RLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTG 289
RLFD+M ERDAVSWN +I+ Y S+ EAF+L M GVE +++TWNTIAGGCL G
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Query: 290 NFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCY--GEYENV 347
N+ G L + MR + SVA + GL ACSH+GALK GK H +R C + +NV
Sbjct: 300 NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 348 RNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGV 407
RN+LITMYSRC DLRHA+I+F+ S+ TWNS++SG+ + + +EE++FL +EM SG
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 408 EPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAK 467
PN++T+ASILPL ARV NLQHGKEFHCYILRR + + L+LWNSLV+MYA+SG++ AK
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 468 SVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSG 527
VFD M +RD+VTYTSLI GYG G+G VAL F++M+++ IKPDHVTMVAVLSACSHS
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 528 LVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATL 587
LV EG F +M ++GI +LEH++CMVDLY RAG L+KA++I +PY P+SAM ATL
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Query: 588 LGACQIHRNTGIGEWAAEK-LLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGV 646
L AC IH NT IGEWAA+K LLET+PE+ G+Y+L+A+MYA TG W KL V+T + DLGV
Sbjct: 600 LKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGV 659
Query: 647 RKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEFCSEEEIV 706
+K A L++ S + + P M D + +E+ EE +V
Sbjct: 660 QKAHEFA-----------LMETDSELDGENNKP--------MNDDSVINQEQSSDEERLV 700
Query: 707 E 707
E
Sbjct: 701 E 701
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/718 (33%), Positives = 383/718 (53%), Gaps = 19/718 (2%)
Query: 5 SSRLILNGLSVSQLEKFIPKKWKQPINNEHIMRINLLETLKDFAGRGNLSKAFEAFTRIR 64
+S LI +SV L + + P ++ + N L ++ + G +K F +
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL--IRSYGDNGCANKCLYLFGLMH 119
Query: 65 ITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSL 124
+ + D +F + CG++ ++ G+ HA ++ G N + LV Y+
Sbjct: 120 SLSWTPDNY--TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 125 YNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSR-RIRGDNFTYPSVLK 183
++A + + ++ + WN +I Y + G AL ++ +M + R DN T +VL
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 184 ACGEMMDVDFGRVVHSCIDACHEW--SLFVHNALVSMYGKFGQVDVARRLFDKMLERDAV 241
C + G+ +H C E ++FV N LV MY K G +D A +F M +D V
Sbjct: 238 PCASLGTHSLGKQLH-CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 242 SWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRM 301
SWN M++ Y+ G +++A +LF +MQEE ++++V+TW+ G + G L + +M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 302 RTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVR-------GCYGEYENVRNALITM 354
+ + V + L C+ VGAL GKEIH A++ +G+ V N LI M
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 355 YSRCKDLRHAYILFKMTA--EKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVE--PN 410
Y++CK + A +F + E+ ++TW M+ GY+ A ++ L EMF + PN
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
Query: 411 YVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVF 470
TI+ L CA +A L+ GK+ H Y LR L + N L++MYA+ G + +A+ VF
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 471 DLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVV 530
D M ++EVT+TSL+ GYG+ G G AL +F+EM + K D VT++ VL ACSHSG++
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 531 EGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGA 590
+G + F RM +++G+ P EH+AC+VDL GRAG LN A +I +MP P +W L
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 591 CQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIP 650
C+IH +GE+AAEK+ E + G Y L++N+YA G W + ++R+ MR GV+K P
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 651 GCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEFCSEEEIVEE 708
GC+WV+ + F V D ++ A+EIY +L + +KD GYV + F + EE
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEE 774
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/613 (34%), Positives = 345/613 (56%), Gaps = 11/613 (1%)
Query: 88 KALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVEN-SNIRYP--LPWN 144
K L + +HA I +GL + KL+ F + + + I+ P L WN
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 145 LLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID-- 202
+ + AL +Y M S + +++T+P VLK+C + G+ +H +
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 203 ACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQL 262
C + L+VH +L+SMY + G+++ A ++FDK RD VS+ +I YAS+G + A +L
Sbjct: 164 GC-DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 263 FVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSH 322
F E+ + +V++WN + G TGN+K LEL M D V + AC+
Sbjct: 223 FDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 323 VGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSM 382
G+++LG+++H +G + NALI +YS+C +L A LF+ K +I+WN++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 383 LSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAM 442
+ GYTH++ +E+ LF+EM RSG PN VT+ SILP CA + + G+ H YI +R
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 443 -FNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLF 501
L SL++MYA+ G + A VF+ + + ++ ++I G+ + G + LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 502 EEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGR 561
M K I+PD +T V +LSACSHSG++ G+ F MT Y + P+LEH+ CM+DL G
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 562 AGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLI 621
+GL +A+E+I M P +W +LL AC++H N +GE AE L++ PEN G YVL+
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 622 ANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLL 681
+N+YA+ G W+++AK R + D G++K+PGC+ ++ +V F++ D + + +EIY +L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 682 GGLTELMKDAGYV 694
+ L++ AG+V
Sbjct: 639 EEMEVLLEKAGFV 651
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 189/421 (44%), Gaps = 71/421 (16%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALG---------------------------LEKN 108
+F ++ C K KA +G+Q+H + LG +K+
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 109 P----VLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYK 164
P V L+ YAS NA L + ++ + WN +IS Y G Y EAL ++K
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 165 QMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACHEW--SLFVHNALVSMYGKF 222
M +R D T +V+ AC + ++ GR VH ID H + +L + NAL+ +Y K
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD-HGFGSNLKIVNALIDLYSKC 314
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
G+++ A LF+++ +D +SWNT+I Y L+KEA LF EM G N +T +I
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI- 373
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYG 342
L AC+H+GA+ +G+ IH + G
Sbjct: 374 ----------------------------------LPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 343 --EYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFR 400
++R +LI MY++C D+ A+ +F KS+ +WN+M+ G+ A+ S LF
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 401 EMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARS 460
M + G++P+ +T +L C+ L G+ + + L + ++++ S
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
Query: 461 G 461
G
Sbjct: 520 G 520
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 47 FAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLE 106
+A GN +A E F + T D + ++ C + ++ G+Q+H G
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDE--STMVTVVSACAQSGSIELGRQVHLWIDDHGFG 298
Query: 107 KNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQM 166
N +V L+ Y+ AC L E + + WN LI Y Y EAL ++++M
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 167 QSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID-----ACHEWSLFVHNALVSMYGK 221
++ T S+L AC + +D GR +H ID + SL +L+ MY K
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL--RTSLIDMYAK 416
Query: 222 FGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTI 281
G ++ A ++F+ +L + SWN MI +A G +F LF M++ G++ + IT+ +
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476
Query: 282 AGGCLRTG 289
C +G
Sbjct: 477 LSACSHSG 484
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/670 (33%), Positives = 355/670 (52%), Gaps = 45/670 (6%)
Query: 28 QPINNEHIMRINLL--ETLKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCG 85
+PI++ ++N+L LK FA +L KA + F R+R + V+ +F +++ CG
Sbjct: 93 EPIDS----KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV--EPVVYNFTYLLKVCG 146
Query: 86 KVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNL 145
L GK++H + G + + L YA N A + + R + WN
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 146 LISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDAC 204
+++ Y ++G AL + K M ++ T SVL A + + G+ +H + +
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 205 HEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFV 264
+ + + ALV MY K G ++ AR+LFD MLER+ VSWN+MI AY KEA +F
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 265 EMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVG 324
+M +EGV+ V+ + L AC+ +G
Sbjct: 327 KMLDEGVKPT-----------------------------------DVSVMGALHACADLG 351
Query: 325 ALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLS 384
L+ G+ IH +V +V N+LI+MY +CK++ A +F +++++WN+M+
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 385 GYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFN 444
G+ ++ F +M V+P+ T S++ A ++ H K H ++R + +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL-D 470
Query: 445 EHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEM 504
+++ + +LV+MYA+ G + A+ +FD+MS R T+ ++I GYG G G+ AL+LFEEM
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 505 NKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGL 564
K IKP+ VT ++V+SACSHSGLV G K F M Y I ++H+ MVDL GRAG
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 565 LNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANM 624
LN+A + I +MP P ++ +LGACQIH+N E AAE+L E P++ GY+VL+AN+
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANI 650
Query: 625 YAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGL 684
Y A W+K+ +VR M G+RK PGC+ V+ N F T++ +++IY L L
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Query: 685 TELMKDAGYV 694
+K+AGYV
Sbjct: 711 ICHIKEAGYV 720
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 244/527 (46%), Gaps = 42/527 (7%)
Query: 86 KVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNL 145
+ +L + +Q+ GL + KLV+ + + + A + E + + + ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 146 LISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDAC 204
++ + + +AL + +M+ + + + +LK CG+ ++ G+ +H + +
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 205 HEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFV 264
LF L +MY K QV+ AR++FD+M ERD VSWNT+++ Y+ G+ + A ++
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 265 EMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVG 324
M EE ++ + IT ++ L A S +
Sbjct: 226 SMCEENLKPSFITIVSV-----------------------------------LPAVSALR 250
Query: 325 ALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLS 384
+ +GKEIHG A+R + N+ AL+ MY++C L A LF E+++++WNSM+
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 385 GYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFN 444
Y + +E+ +F++M GV+P V++ L CA + +L+ G+ H + + +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL-D 369
Query: 445 EHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEM 504
++ + NSL+ MY + +V A S+F + R V++ ++I G+ G AL F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 505 NKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGL 564
+KPD T V+V++A + + K + + + +VD+Y + G
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELS-ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 565 LNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETR 611
+ A+ I M + W ++ H G G+ A E E +
Sbjct: 489 IMIARLIFDMMSERHVTT-WNAMIDGYGTH---GFGKAALELFEEMQ 531
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 331/641 (51%), Gaps = 39/641 (6%)
Query: 55 KAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPK 114
KA E F R+ + D ++ A ++ C L +G+QLHA LG N +
Sbjct: 372 KAMELFKRMHLDGLEPDS--NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 115 LVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGD 174
L+ YA + A + + + WN+++ Y + +++QMQ I +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 175 NFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFD 233
+TYPS+LK C + D++ G +HS I + + +V + L+ MY K G++D A
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA----- 544
Query: 234 KMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKG 293
W+ +I +A K +V++W T+ G +
Sbjct: 545 ---------WDILIR-FAGK--------------------DVVSWTTMIAGYTQYNFDDK 574
Query: 294 VLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALIT 353
L +M + D V + AC+ + ALK G++IH A + +NAL+T
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 354 MYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVT 413
+YSRC + +Y+ F+ T I WN+++SG+ EE+ +F M R G++ N T
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 414 IASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLM 473
S + + AN++ GK+ H I + ++ + N+L+ MYA+ G + +A+ F +
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTG-YDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 474 SRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQ 533
S ++EV++ ++I Y G G AL F++M + ++P+HVT+V VLSACSH GLV +G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 534 KQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQI 593
FE M S YG+ P+ EH+ C+VD+ RAGLL++AKE I +MP P + +W TLL AC +
Sbjct: 814 AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873
Query: 594 HRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCA 653
H+N IGE+AA LLE PE+S YVL++N+YA + WD R M++ GV+K PG +
Sbjct: 874 HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Query: 654 WVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYV 694
W++ N F V D ++ A EI+ LT+ + GYV
Sbjct: 934 WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 974
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 243/529 (45%), Gaps = 45/529 (8%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLD--SFAHIIFCC-GKVKALAQGKQLHACA 100
+K+ A R + + F F R+ S +V + +F+ ++ C G A +Q+HA
Sbjct: 158 IKELASRNLIGEVFGLFVRM----VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 101 IALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEAL 160
+ GL + V+ L+ Y+ + A + + ++ W +IS ++ AEA+
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 161 CVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DACHEWSLFVHNALVSMY 219
++ M I + + SVL AC ++ ++ G +H + +V NALVS+Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 220 GKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWN 279
G + A +F M +RDAV++NT+I+ + G ++A +LF M +G+E + N
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS---N 390
Query: 280 TIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRG 339
T+A + ACS G L G+++H +
Sbjct: 391 TLASLVV--------------------------------ACSADGTLFRGQQLHAYTTKL 418
Query: 340 CYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLF 399
+ + AL+ +Y++C D+ A F T ++++ WN ML Y LD S +F
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 400 REMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYAR 459
R+M + PN T SIL C R+ +L+ G++ H I+ + F + + + L++MYA+
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAK 537
Query: 460 SGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAV 519
GK+ A + + +D V++T++IAGY AL F +M I+ D V +
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 520 LSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKA 568
+SAC+ + EGQ Q + G L +V LY R G + ++
Sbjct: 598 VSACAGLQALKEGQ-QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 189/412 (45%), Gaps = 52/412 (12%)
Query: 166 MQSRRIRGDNFTYPSVLKACGEMM-DVDFGRVVHSCI-------DACHEWSLFVHNALVS 217
+++R IR ++ T +L+ C + +D GR +HS I + C LF
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLF------D 128
Query: 218 MYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVIT 277
Y G + A ++FD+M ER +WN MI AS+ L E F LFV M E V N
Sbjct: 129 FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN--- 185
Query: 278 WNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVG-ALKLGKEIHGSA 336
G F GVLE AC A + ++IH
Sbjct: 186 ----------EGTFSGVLE----------------------ACRGGSVAFDVVEQIHARI 213
Query: 337 VRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESA 396
+ + V N LI +YSR + A +F K +W +M+SG + +C E+
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 397 FLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEM 456
LF +M+ G+ P +S+L C ++ +L+ G++ H +L+ F+ + N+LV +
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSL 332
Query: 457 YARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTM 516
Y G + A+ +F MS+RD VTY +LI G G G A++LF+ M+ + ++PD T+
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 517 VAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKA 568
+++ ACS G + GQ Q T+ G + +++LY + + A
Sbjct: 393 ASLVVACSADGTLFRGQ-QLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 197/441 (44%), Gaps = 45/441 (10%)
Query: 52 NLSKAFEAFTRIRITAASHDVVLDSFAH--IIFCCGKVKALAQGKQLHACAIALGLEKNP 109
+L +F F +++I ++V + + + I+ C ++ L G+Q+H+ I + N
Sbjct: 470 DLRNSFRIFRQMQI----EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 110 VLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSR 169
+ L+ YA + A ++ + + W +I+ Y + F +AL ++QM R
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 170 RIRGDNFTYPSVLKACGEMMDVDFGRVVHS--CIDACHEWSLFVHNALVSMYGKFGQVDV 227
IR D + + AC + + G+ +H+ C+ L NALV++Y + G+++
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS-DLPFQNALVTLYSRCGKIEE 644
Query: 228 ARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLR 287
+ F++ D ++WN ++S + G +EA ++FV M EG++ N T+ +
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS------- 697
Query: 288 TGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENV 347
+ A S +K GK++H + Y V
Sbjct: 698 ----------------------------AVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 348 RNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGV 407
NALI+MY++C + A F + K+ ++WN++++ Y+ E+ F +M S V
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 408 EPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAK 467
PN+VT+ +L C+ + + G + + + + +V+M R+G + AK
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAK 849
Query: 468 SVFDLMS-RRDEVTYTSLIAG 487
M + D + + +L++
Sbjct: 850 EFIQEMPIKPDALVWRTLLSA 870
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Query: 406 GVEPNYVTIASILPLCARV-ANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP 464
G+ PN+ T+ +L C + +L G++ H IL+ + + + L L + Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGDLY 137
Query: 465 EAKSVFDLMSRRDEVTYTSLI---AGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLS 521
A VFD M R T+ +I A + GE LF M + P+ T VL
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGE---VFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 522 ACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTS 581
AC + + +Q G+ ++DLY R G ++ A+ + + S
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 582 AMWATLLG 589
+ A + G
Sbjct: 255 SWVAMISG 262
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 351/642 (54%), Gaps = 39/642 (6%)
Query: 95 QLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDG 154
Q HA + G + + + KL+ Y++++ +N+A ++++ ++ LI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 155 FYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH--SCIDACHEWSLFVH 212
+ +++ V+ +M S + D+ P++ K C E+ G+ +H SC+ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGL-DMDAFVQ 154
Query: 213 NALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVE 272
++ MY + G++ AR++FD+M ++D V+ + ++ AYA KG +E ++ EM+ G+E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 273 VNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEI 332
N+++WN I G R+G K + + ++ D V L + L +G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 333 HGSAVRGCYGEYENVRNALITMYSRCKDLR-----------------HAYI--------- 366
HG ++ + + V +A+I MY + + +AYI
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 367 --------LFK-MTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASI 417
LFK T E ++++W S+++G E+ LFREM +GV+PN+VTI S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 418 LPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRD 477
LP C +A L HG+ H + +R + +++ + ++L++MYA+ G++ ++ VF++M ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLL-DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 478 EVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFE 537
V + SL+ G+ + G+ + + +FE + + ++KPD ++ ++LSAC GL EG K F+
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 538 RMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNT 597
M+ YGI P+LEH++CMV+L GRAG L +A ++I +MP+ P S +W LL +C++ N
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 598 GIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDA 657
+ E AAEKL PEN G YVL++N+YAA G W ++ +R M LG++K PGC+W+
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 658 GNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEF 699
N L D S+ Q +I + +++ M+ +G+ +F
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDF 675
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 217/465 (46%), Gaps = 57/465 (12%)
Query: 53 LSKAFEAFTRIRITAASHDVVLDS--FAHIIFCCGKVKALAQGKQLHACAIALGL----- 105
+++ F+R+ SH ++ DS ++ C ++ A GKQ+H + GL
Sbjct: 97 FTQSIGVFSRM----FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 106 --------------------------EKNPVLVPKLVTFYASFSLYNNACFLV---ENSN 136
+K+ V L+ YA ++ E+S
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 137 IRYPL-PWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
I + WN ++S + R G++ EA+ +++++ D T SVL + G+ ++ GR
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 196 VVHSCI-------DACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMIS 248
++H + D C V +A++ MYGK G V LF++ +A N I+
Sbjct: 273 LIHGYVIKQGLLKDKC------VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 249 AYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYL 308
+ GL +A ++F +E+ +E+NV++W +I GC + G LEL M+
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 309 DSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILF 368
+ V L AC ++ AL G+ HG AVR + +V +ALI MY++C + + I+F
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 369 KMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQ 428
M K+++ WNS+++G++ A+E +F + R+ ++P++++ S+L C +V
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 429 HGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLM 473
G ++ + L ++ +V + R+GK+ EA +DL+
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA---YDLI 548
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 49/304 (16%)
Query: 11 NGLSVSQLEKFIPKKWKQPINNEHIMRINLLETLKDFAG---RGNLSKAFEAFTRIRITA 67
NGL LE F + E M +N++ AG G +A E F +++
Sbjct: 331 NGLVDKALEMF-------ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 68 ASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNN 127
+ V + ++ CG + AL G+ H A+ + L N + L+ YA N
Sbjct: 384 VKPNHV--TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 128 ACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGE 187
+ + + + WN L++ + G E + +++ + R++ D ++ S+L ACG+
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 188 MMDVDFGRVVHSCIDACH--EWSLFVHNALVSMYGKFGQVDVARRLFDKM-LERDAVSWN 244
+ D G + + + L ++ +V++ G+ G++ A L +M E D+ W
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 245 TMISA----------------------------------YASKGLWKEAFQLFVEMQEEG 270
++++ YA+KG+W E + +M+ G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 271 VEVN 274
++ N
Sbjct: 622 LKKN 625
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 319/606 (52%), Gaps = 83/606 (13%)
Query: 130 FLVENSNIRYPLP------WNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLK 183
FL E ++ +P WN ++S + + EALC + M + +++ SVL
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 184 ACGEMMDVDFGRVVHSCIDACHEWS-LFVHNALVSMYGKFGQVDVARRLFDKMLERDAVS 242
AC + D++ G VHS I S +++ +ALV MY K G V+ A+R+FD+M +R+ VS
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 243 WNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMR 302
WN++I+ + G EA +F M E SR+
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLE------------------------------SRVE 250
Query: 303 TQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYEN---VRNALITMYSRCK 359
E L SV + AC+ + A+K+G+E+HG V+ + N + NA + MY++C
Sbjct: 251 PDEVTLASV-----ISACASLSAIKVGQEVHGRVVKN--DKLRNDIILSNAFVDMYAKCS 303
Query: 360 DLRHAY-------------------------------ILFKMTAEKSIITWNSMLSGYTH 388
++ A ++F AE+++++WN++++GYT
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 389 LDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMF----- 443
EE+ LF + R V P + + A+IL CA +A L G + H ++L+
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 444 NEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEE 503
+ + + NSL++MY + G V E VF M RD V++ ++I G+ G G AL+LF E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 504 MNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAG 563
M ++ KPDH+TM+ VLSAC H+G V EG+ F MT +G+ P +H+ CMVDL GRAG
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543
Query: 564 LLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIAN 623
L +AK +I +MP P S +W +LL AC++HRN +G++ AEKLLE P NSG YVL++N
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603
Query: 624 MYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGG 683
MYA G W+ + VR MR GV K PGC+W+ F+V D S+ + ++I+ LL
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663
Query: 684 LTELMK 689
L M+
Sbjct: 664 LIAEMR 669
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 206/424 (48%), Gaps = 19/424 (4%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
SFA ++ C + + +G Q+H+ + + LV Y+ N+A + +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
R + WN LI+ + ++G EAL V++ M R+ D T SV+ AC + + G+
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 196 VVHSCIDACHEW--SLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASK 253
VH + + + + NA V MY K ++ AR +FD M R+ ++ +MIS YA
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 254 GLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVAT 313
K A +F +M E NV++WN + G + G + L L ++ + +
Sbjct: 334 ASTKAARLMFTKMAER----NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 389
Query: 314 VIGLGACSHVGALKLGKEIHGSAVRGCY----GEYEN--VRNALITMYSRCKDLRHAYIL 367
L AC+ + L LG + H ++ + GE ++ V N+LI MY +C + Y++
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 368 FKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANL 427
F+ E+ ++WN+M+ G+ E+ LFREM SG +P+++T+ +L C +
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 509
Query: 428 QHGKEFHCYILRR---AMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRR-DEVTYTS 483
+ G+ + + R A +H + +V++ R+G + EAKS+ + M + D V + S
Sbjct: 510 EEGRHYFSSMTRDFGVAPLRDH---YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 484 LIAG 487
L+A
Sbjct: 567 LLAA 570
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 187/384 (48%), Gaps = 37/384 (9%)
Query: 174 DNFTYPSVLKAC-GEMMDVDFGRVVH-SCIDACHEWSLFVHNALVSMYGKFGQVDVARRL 231
D+ + +L +C + + R VH S I + +F+ N L+ Y K G ++ R++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 232 FDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNF 291
FDKM +R+ +WN++++ G EA LF M E + TWN++ G +
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRC 133
Query: 292 KGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNAL 351
+ L + M + L+ + L ACS + + G ++H + + + +AL
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 352 ITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNY 411
+ MYS+C ++ A +F ++++++WNS+++ + A E+ +F+ M S VEP+
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 412 VTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFD 471
VT+AS++ CA ++ ++ G+E H +++ ++L N+ V+MYA+ ++ EA+ +FD
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 472 -------------------------------LMSRRDEVTYTSLIAGYGIQGEGRVALKL 500
M+ R+ V++ +LIAGY GE AL L
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Query: 501 FEEMNKNQIKPDHVTMVAVLSACS 524
F + + + P H + +L AC+
Sbjct: 374 FCLLKRESVCPTHYSFANILKACA 397
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 7/261 (2%)
Query: 317 LGACSHVGALKLGKEIHGS-AVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKS 375
+ A S G+L+ G+++ R Y N+++T ++ L A LF+ E+
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIY-----TWNSVVTGLTKLGFLDEADSLFRSMPERD 116
Query: 376 IITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHC 435
TWNSM+SG+ D EE+ F M + G N + AS+L C+ + ++ G + H
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS 176
Query: 436 YILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGR 495
I + ++ + + ++LV+MY++ G V +A+ VFD M R+ V++ SLI + G
Sbjct: 177 LIAKSPFLSD-VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAV 235
Query: 496 VALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACM 555
AL +F+ M +++++PD VT+ +V+SAC+ + GQ+ R+ + +
Sbjct: 236 EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAF 295
Query: 556 VDLYGRAGLLNKAKEIITKMP 576
VD+Y + + +A+ I MP
Sbjct: 296 VDMYAKCSRIKEARFIFDSMP 316
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 357 bits (915), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 328/609 (53%), Gaps = 36/609 (5%)
Query: 91 AQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLY 150
AQ KQ+HA + LGL+ + L+ KL+ +SF A + ++ PWN +I Y
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 151 VRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DACHEWSL 209
R+ + +AL +Y MQ R+ D+FT+P +LKAC + + GR VH+ + + +
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 210 FVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEE 269
FV N L+++Y K ++ AR +F E L
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVF-------------------------EGLPL------- 182
Query: 270 GVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLG 329
E +++W I + G LE+ S+MR + D VA V L A + + LK G
Sbjct: 183 -PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 330 KEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHL 389
+ IH S V+ ++ +L TMY++C + A ILF ++I WN+M+SGY
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 390 DCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLL 449
A E+ +F EM V P+ ++I S + CA+V +L+ + + Y+ R+ + + + +
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV-GRSDYRDDVFI 360
Query: 450 WNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQI 509
++L++M+A+ G V A+ VFD RD V ++++I GYG+ G R A+ L+ M + +
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 510 KPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAK 569
P+ VT + +L AC+HSG+V EG F RM + I PQ +H+AC++DL GRAG L++A
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 570 EIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATG 629
E+I MP P +W LL AC+ HR+ +GE+AA++L P N+G+YV ++N+YAA
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 539
Query: 630 CWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMK 689
WD++A+VR M++ G+ K GC+WV+ F V D S+ + +EI + + +K
Sbjct: 540 LWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
Query: 690 DAGYVVKEE 698
+ G+V ++
Sbjct: 600 EGGFVANKD 608
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 226/541 (41%), Gaps = 89/541 (16%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
++ ++ + A ++ +++ S D +F H++ C + L G+ +HA L
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSF--TFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLP------WNLLISLYVRDGFYA 157
G + + + L+ YA +A + E PLP W ++S Y ++G
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEG----LPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 158 EALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACH---EWSLFVHNA 214
EAL ++ QM+ ++ D SVL A + D+ GR +H+ + E L + +
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--S 262
Query: 215 LVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVN 274
L +MY K GQV A+ LFDKM + + WN MIS YA G +EA +F EM + V +
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 275 VITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHG 334
I+ + + AC+ VG+L+ + ++
Sbjct: 323 TISITS-----------------------------------AISACAQVGSLEQARSMYE 347
Query: 335 SAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEE 394
R Y + + +ALI M+++C + A ++F T ++ ++ W++M+ GY A E
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 395 SAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLV 454
+ L+R M R GV PN VT +L C ++ G F + + N + ++
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI-NPQQQHYACVI 466
Query: 455 EMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHV 514
++ R+G + +A V M ++P
Sbjct: 467 DLLGRAGHLDQAYEVIKCMP----------------------------------VQPGVT 492
Query: 515 TMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITK 574
A+LSAC V G+ +++ SI H+ + +LY A L ++ E+ +
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDP--SNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 575 M 575
M
Sbjct: 551 M 551
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 218/674 (32%), Positives = 342/674 (50%), Gaps = 52/674 (7%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCC-----GKVKALAQGKQLHA 98
+ + A G+ S + F ++ S V +DS+ F C ++++ G+QLH
Sbjct: 167 MNELAKSGDFSGSIGLFKKM----MSSGVEMDSYT---FSCVSKSFSSLRSVHGGEQLHG 219
Query: 99 CAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAE 158
+ G + + LV FY ++A + + R + WN +I+ YV +G +
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 159 ALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSC-IDACHEWSLFVHNALVS 217
L V+ QM I D T SV C + + GR VHS + AC N L+
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 218 MYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVIT 277
MY K G +D A+ +F +M +R VS+ +MI+ YA +GL EA +LF EM+EEG+ +V T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 278 WNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAV 337
+ L C+ L GK +H
Sbjct: 400 VTAV-----------------------------------LNCCARYRLLDEGKRVHEWIK 424
Query: 338 RGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAF 397
G V NAL+ MY++C ++ A ++F K II+WN+++ GY+ A E+
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 398 LFREMFRSG-VEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEM 456
LF + P+ T+A +LP CA ++ G+E H YI+R F++ + NSLV+M
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA-NSLVDM 543
Query: 457 YARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTM 516
YA+ G + A +FD ++ +D V++T +IAGYG+ G G+ A+ LF +M + I+ D ++
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 517 VAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMP 576
V++L ACSHSGLV EG + F M I P +EH+AC+VD+ R G L KA I MP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 577 YTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAK 636
P + +W LL C+IH + + E AEK+ E PEN+GYYVL+AN+YA W+++ +
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723
Query: 637 VRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGY--V 694
+R + G+RK PGC+W++ + F+ D+SN + + I L + M + GY +
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPL 783
Query: 695 VKEEFCSEEEIVEE 708
K EE+ +E
Sbjct: 784 TKYALIDAEEMEKE 797
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 265/568 (46%), Gaps = 59/568 (10%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
L+ F GNL A ++ + D+ + ++ C K+L GK++
Sbjct: 68 LRRFCESGNLENA----VKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGN 123
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
G + L KL Y + A + + I L WN+L++ + G ++ ++ ++
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DACHEWSLFVHNALVSMYGKF 222
K+M S + D++T+ V K+ + V G +H I + V N+LV+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
+VD AR++FD+M ERD +SWN++I+ Y S GL ++ +FV+M G+E+++ T ++
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYG 342
GC SR+ + LG+ +H V+ C+
Sbjct: 304 AGCAD-----------SRL------------------------ISLGRAVHSIGVKACFS 328
Query: 343 EYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREM 402
+ N L+ MYS+C DL A +F+ +++S++++ SM++GY A E+ LF EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 403 FRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGK 462
G+ P+ T+ ++L CAR L GK H +I + + + N+L++MYA+ G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGS 447
Query: 463 VPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFE-EMNKNQIKPDHVTMVAVLS 521
+ EA+ VF M +D +++ ++I GY AL LF + + + PD T+ VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 522 ACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA------CMVDLYGRAGLLNKAKEIITKM 575
AC+ F++ I+G + +F+ +VD+Y + G L A + +
Sbjct: 508 ACA-------SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 576 PYTPTSAMWATLLGACQIHRNTGIGEWA 603
+ W ++ +H G G+ A
Sbjct: 561 A-SKDLVSWTVMIAGYGMH---GFGKEA 584
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 219/655 (33%), Positives = 336/655 (51%), Gaps = 43/655 (6%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
++ +A G K E F ++ ++ +++ +F ++ C L G Q H+ I
Sbjct: 400 IRGYAHNGESHKVMELFMDMK--SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
L KN + LV YA +A + E R + WN +I YV+D +EA ++
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACH-EWSLFVHNALVSMYGKF 222
K+M I D S LKAC + + G+ VH C + L ++L+ MY K
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
G + AR++F + E VS N +I+ Y+ L +EA LF EM GV + IT+ TI
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATI- 635
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAV-RGCY 341
+ AC +L LG + HG RG
Sbjct: 636 ----------------------------------VEACHKPESLTLGTQFHGQITKRGFS 661
Query: 342 GEYENVRNALITMYSRCKDLRHAYILF-KMTAEKSIITWNSMLSGYTHLDCAEESAFLFR 400
E E + +L+ MY + + A LF ++++ KSI+ W M+SG++ EE+ ++
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 401 EMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARS 460
EM GV P+ T ++L +C+ +++L+ G+ H I A + L N+L++MYA+
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA-HDLDELTSNTLIDMYAKC 780
Query: 461 GKVPEAKSVFDLMSRRDEV-TYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAV 519
G + + VFD M RR V ++ SLI GY G ALK+F+ M ++ I PD +T + V
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 520 LSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTP 579
L+ACSH+G V +G+K FE M YGI +++H ACMVDL GR G L +A + I P
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 900
Query: 580 TSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRT 639
+ +W++LLGAC+IH + GE +AEKL+E P+NS YVL++N+YA+ GCW+K +R
Sbjct: 901 DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRK 960
Query: 640 CMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYV 694
MRD GV+K+PG +W+D F D S+ + +I L L +LMKD V
Sbjct: 961 VMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVV 1015
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 161/612 (26%), Positives = 283/612 (46%), Gaps = 88/612 (14%)
Query: 54 SKAFEAFTRIRITAASHDVVLDSFAHII------------FCCGKVK------------- 88
S F++F+ +R + S D+ + H++ C G+ K
Sbjct: 11 SAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQ 70
Query: 89 ----ALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPL--- 141
AL GK +H+ ++ LG++ L +V YA C V + ++
Sbjct: 71 RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAK-------CAQVSYAEKQFDFLEK 123
Query: 142 ---PWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH 198
WN ++S+Y G + L + + +I + FT+ VL C +V+FGR +H
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 199 -SCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWK 257
S I E + + ALV MY K ++ ARR+F+ +++ + V W + S Y GL +
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 258 EAFQLFVEMQEEG--------VEV-----------------------NVITWNTIAGGCL 286
EA +F M++EG V V +V+ WN + G
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 287 RTGNFKGVLELLSRMR-----TQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCY 341
+ G +E MR + + L SV + IG+ V L LG +H A++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI-----VANLDLGLVVHAEAIKLGL 358
Query: 342 GEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFRE 401
V ++L++MYS+C+ + A +F+ EK+ + WN+M+ GY H + + LF +
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 402 MFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSG 461
M SG + T S+L CA +L+ G +FH I+++ + ++L + N+LV+MYA+ G
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL-AKNLFVGNALVDMYAKCG 477
Query: 462 KVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRV-ALKLFEEMNKNQIKPDHVTMVAVL 520
+ +A+ +F+ M RD VT+ ++I Y +Q E A LF+ MN I D + + L
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSY-VQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 521 SACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPT 580
AC+H + +G KQ ++ G+ L + ++D+Y + G++ A+++ + +P
Sbjct: 537 KACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 581 SAMWATLLGACQ 592
+M A + G Q
Sbjct: 596 VSMNALIAGYSQ 607
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 211/475 (44%), Gaps = 43/475 (9%)
Query: 141 LPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS- 199
+ WN++IS + + G A+ + M+ ++ T SVL A G + ++D G VVH+
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 200 CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEA 259
I +++V ++LVSMY K +++ A ++F+ + E+
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK--------------------- 391
Query: 260 FQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGA 319
N + WN + G G V+EL M++ +D L
Sbjct: 392 --------------NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 320 CSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITW 379
C+ L++G + H ++ + V NAL+ MY++C L A +F+ ++ +TW
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 380 NSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILR 439
N+++ Y + E+ LF+ M G+ + +AS L C V L GK+ HC ++
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 440 RAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALK 499
+ + L +SL++MY++ G + +A+ VF + V+ +LIAGY Q A+
Sbjct: 558 CGL-DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVV 615
Query: 500 LFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA-CMVDL 558
LF+EM + P +T ++ AC + G QF + G + E+ ++ +
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGT-QFHGQITKRGFSSEGEYLGISLLGM 674
Query: 559 YGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPE 613
Y + + +A + +++ + +W ++ H G E A + E R +
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSG---HSQNGFYEEALKFYKEMRHD 726
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 348 bits (894), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 218/702 (31%), Positives = 359/702 (51%), Gaps = 80/702 (11%)
Query: 75 DSFAHIIFCCGKVKALAQGKQLHACAIA----LGLEKNPVLVPKLVTFYASFSLYNNACF 130
D F ++ C +A +G ++++ A++ LG+E L + + F +A +
Sbjct: 95 DVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE----LGNAFLAMFVRFGNLVDAWY 150
Query: 131 LVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQM-QSRRIRGDNFTYPSVLKACGEMM 189
+ + R WN+L+ Y + G++ EA+C+Y +M ++ D +T+P VL+ CG +
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 190 DVDFGRVVH-SCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMIS 248
D+ G+ VH + +E + V NAL++MY K G V AR LFD+M RD +SWN MIS
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 249 AYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGC----------------------- 285
Y G+ E +LF M+ V+ +++T ++ C
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 286 ------------LRTGNFKGVLELLSRMRTQE----------------------TYL--- 308
L G+++ +L SRM ++ TY
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 309 ------DSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLR 362
D + L AC+ +G L G E+H A++ Y V N LI MYS+CK +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 363 HAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCA 422
A +F K++I+W S+++G + E+ R+M + ++PN +T+ + L CA
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACA 509
Query: 423 RVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYT 482
R+ L GKE H ++LR + + L N+L++MY R G++ A S F+ ++D ++
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLP-NALLDMYVRCGRMNTAWSQFN-SQKKDVTSWN 567
Query: 483 SLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSI 542
L+ GY +G+G + ++LF+ M K++++PD +T +++L CS S +V +G F +M
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED- 626
Query: 543 YGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEW 602
YG+ P L+H+AC+VDL GRAG L +A + I KMP TP A+W LL AC+IH +GE
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL 686
Query: 603 AAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFS 662
+A+ + E ++ GYY+L+ N+YA G W ++AKVR M++ G+ GC+WV+
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746
Query: 663 PFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEFCSEEE 704
FL DD + Q +EI +L G E M + G E S +E
Sbjct: 747 AFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 788
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 12/312 (3%)
Query: 284 GCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGE 343
G G + ++LL+ M+ +D V + C A + G +++ A+
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 344 YENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLF-REM 402
+ NA + M+ R +L A+ +F +E+++ +WN ++ GY +E+ L+ R +
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 403 FRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGK 462
+ GV+P+ T +L C + +L GKE H +++R + + + N+L+ MY + G
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYG-YELDIDVVNALITMYVKCGD 246
Query: 463 VPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSA 522
V A+ +FD M RRD +++ ++I+GY G L+LF M + PD +T+ +V+SA
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 523 CSHSGLVVEGQKQFERMTSIY----GIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYT 578
C + G ++ R Y G + + +Y AG +A+++ ++M
Sbjct: 307 CE-----LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 579 PTSAMWATLLGA 590
+ W T++
Sbjct: 362 DIVS-WTTMISG 372
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 188/474 (39%), Gaps = 75/474 (15%)
Query: 51 GNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPV 110
G + E F +R + D++ + +I C + G+ +HA I G +
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLM--TLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 111 LVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRR 170
+ L Y + + A L + + W +IS Y + +A+ Y+ M
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 171 IRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVAR 229
++ D T +VL AC + D+D G +H I A + V N L++MY K +D A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 230 RLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTG 289
+F + ++ +SW ++I+ EA +F+ + ++ N IT C R
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACAR-- 510
Query: 290 NFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRN 349
+GAL GKEIH +R G + + N
Sbjct: 511 ---------------------------------IGALMCGKEIHAHVLRTGVGLDDFLPN 537
Query: 350 ALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEP 409
AL+ MY RC + A+ F + +K + +WN +L+GY+ LF M +S V P
Sbjct: 538 ALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 410 NYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSV 469
+ +T S+L C++ ++ G L++ S +E Y + + V
Sbjct: 597 DEITFISLLCGCSKSQMVRQG-----------------LMYFSKMEDYGVTPNLKHYACV 639
Query: 470 FDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSAC 523
DL+ R GE + A K ++M + PD A+L+AC
Sbjct: 640 VDLLGR---------------AGELQEAHKFIQKM---PVTPDPAVWGALLNAC 675
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/616 (33%), Positives = 333/616 (54%), Gaps = 14/616 (2%)
Query: 86 KVKALAQGKQLHACAI-ALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWN 144
++K+ +Q KQLHA I L + +++ Y + L + A L + L W
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 145 LLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DA 203
+I + +++AL + +M++ D+ +PSVLK+C MMD+ FG VH I
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 204 CHEWSLFVHNALVSMYGKF---GQVDVARRLFDKMLERDAVSWNTMISAYASKGLW--KE 258
+ L+ NAL++MY K G +FD+M +R + S + + A +
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 259 AFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLG 318
++F M + +V+++NTI G ++G ++ L ++ M T + DS L
Sbjct: 195 VRRVFEVMPRK----DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 319 ACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIIT 378
S + GKEIHG +R + ++L+ MY++ + + +F + I+
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 379 WNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYIL 438
WNS+++GY E+ LFR+M + V+P V +S++P CA +A L GK+ H Y+L
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 439 RRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVAL 498
R F ++ + ++LV+MY++ G + A+ +FD M+ DEV++T++I G+ + G G A+
Sbjct: 371 RGG-FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 499 KLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDL 558
LFEEM + +KP+ V VAVL+ACSH GLV E F MT +YG+ +LEH+A + DL
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 559 YGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYY 618
GRAG L +A I+KM PT ++W+TLL +C +H+N + E AEK+ EN G Y
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 619 VLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIY 678
VL+ NMYA+ G W ++AK+R MR G+RK P C+W++ N F+ D S+ +I
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 609
Query: 679 PLLGGLTELMKDAGYV 694
L + E M+ GYV
Sbjct: 610 EFLKAVMEQMEKEGYV 625
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 37/233 (15%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+F+ +I C + L GKQLH + G N + LV Y+ A + +
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
N+ + W +I + G EA+ ++++M+ + ++ + + +VL AC + VD
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 196 VVHSCIDACH--EWSLFVHNALVSMYGKFGQVDVARRLFDKM-LERDAVSWNTMISA--- 249
+ + + L + A+ + G+ G+++ A KM +E W+T++S+
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 250 -------------------------------YASKGLWKEAFQLFVEMQEEGV 271
YAS G WKE +L + M+++G+
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/605 (32%), Positives = 325/605 (53%), Gaps = 18/605 (2%)
Query: 113 PKLVTFYASFSLYNNACFLVENSNIRYPLP------WNLLISLYVRDGFYAEALCVYKQM 166
P L ++ Y+ A + E + LP WN+LI Y G A+ Y M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 167 QSRRIRGD--NFTYPSVLKACGEMMDVDFGRVVH-SCIDACHEWSLFVHNALVSMYGKFG 223
R + T ++LK V G+ +H I E L V + L+ MY G
Sbjct: 130 M-RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 224 QVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAG 283
+ A+++F + +R+ V +N+++ + G+ ++A QLF G+E + ++W +
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIK 243
Query: 284 GCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGE 343
G + G K +E M+ Q +D L AC +GA+ GK+IH +R + +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 344 YENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMF 403
+ V +ALI MY +CK L +A +F +K++++W +M+ GY AEE+ +F +M
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 404 RSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKV 463
RSG++P++ T+ + CA V++L+ G +FH + + + ++ + NSLV +Y + G +
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH-YVTVSNSLVTLYGKCGDI 422
Query: 464 PEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSAC 523
++ +F+ M+ RD V++T++++ Y G ++LF++M ++ +KPD VT+ V+SAC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 524 SHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAM 583
S +GLV +GQ+ F+ MTS YGI P + H++CM+DL+ R+G L +A I MP+ P +
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 584 WATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRD 643
W TLL AC+ N IG+WAAE L+E P + Y L++++YA+ G WD +A++R MR+
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 644 LGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEFCSEE 703
V+K PG +W+ F DD S+ +IY L L + D GY F +
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHD 662
Query: 704 EIVEE 708
VEE
Sbjct: 663 --VEE 665
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 189/398 (47%), Gaps = 39/398 (9%)
Query: 210 FVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEE 269
F++N +V Y ARR+FD++ + + SWN ++ AY+ GL E F ++ +
Sbjct: 42 FLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR 101
Query: 270 GVEVNVITWNTIAGGCLRTGNFKGVLELL-SRMRTQETYLDSVATVIGLGACSHVGALKL 328
+ +TWN + G +G ++ + MR L V + L S G + L
Sbjct: 102 ----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 329 GKEIHGSAVRGCYGEYENVRNALITMYSR------------------------------- 357
GK+IHG ++ + Y V + L+ MY+
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 358 CKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASI 417
C + A LF+ EK ++W +M+ G A+E+ FREM G++ + S+
Sbjct: 218 CGMIEDALQLFR-GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 418 LPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRD 477
LP C + + GK+ H I+ R F +H+ + ++L++MY + + AK+VFD M +++
Sbjct: 277 LPACGGLGAINEGKQIHACII-RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 478 EVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFE 537
V++T+++ GYG G A+K+F +M ++ I PDH T+ +SAC++ + EG QF
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS-QFH 394
Query: 538 RMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKM 575
G+ + +V LYG+ G ++ + + +M
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 218/462 (47%), Gaps = 69/462 (14%)
Query: 93 GKQLHACAIALGLEKNPVLVPKLVTFYASFS------------------LYNN------A 128
GKQ+H I LG E ++ L+ YA+ +YN+ A
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 129 CFLVENSNIRY------PLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVL 182
C ++E++ + + W +I ++G EA+ +++M+ + ++ D + + SVL
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 183 KACGEMMDVDFGRVVHSCIDACH-EWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAV 241
ACG + ++ G+ +H+CI + + ++V +AL+ MY K + A+ +FD+M +++ V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 242 SWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRM 301
SW M+ Y G +EA ++F++MQ G++ + T
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ--------------------- 376
Query: 302 RTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDL 361
+ AC++V +L+ G + HG A+ Y V N+L+T+Y +C D+
Sbjct: 377 --------------AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 362 RHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLC 421
+ LF + ++W +M+S Y A E+ LF +M + G++P+ VT+ ++ C
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 422 ARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS-RRDEVT 480
+R ++ G+ + + + ++ ++++++RSG++ EA + M D +
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 481 YTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSA 522
+T+L++ + +G + + + + ++ P H +LS+
Sbjct: 543 WTTLLS--ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSS 582
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 3/247 (1%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
+K A G +A E F +++ D F ++ CG + A+ +GKQ+HAC I
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQY--PFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
+ + + L+ Y + A + + + + W ++ Y + G EA+ ++
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKF 222
MQ I D++T + AC + ++ G H I + + V N+LV++YGK
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
G +D + RLF++M RDAVSW M+SAYA G E QLF +M + G++ + +T +
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 283 GGCLRTG 289
C R G
Sbjct: 480 SACSRAG 486
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+ I C V +L +G Q H AI GL + LVT Y +++ L
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
N+R + W ++S Y + G E + ++ +M ++ D T V+ AC V+ G+
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 196 VVHSCIDACHEW--SLFVHNALVSMYGKFGQVDVARRLFDKM-LERDAVSWNTMISAYAS 252
+ + + S+ ++ ++ ++ + G+++ A R + M DA+ W T++SA +
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 253 KG 254
KG
Sbjct: 553 KG 554
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 310/558 (55%), Gaps = 28/558 (5%)
Query: 143 WNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI- 201
WN ++S Y ++G +A V+ +M + ++ ++ ++L A V ++ +C+
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAY-----VQNSKMEEACML 210
Query: 202 -DACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAF 260
+ W+L N L+ + K ++ AR+ FD M RD VSWNT+I+ YA G EA
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 261 QLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGAC 320
QLF +E +V TW + G ++ + EL +M + + V+ L
Sbjct: 271 QLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGY 322
Query: 321 SHVGALKLGKEIHGSAVRGCYGEYENVR--NALITMYSRCKDLRHAYILFKMTAEKSIIT 378
+++ KE+ V C NV N +IT Y++C + A LF ++ ++
Sbjct: 323 VQGERMEMAKELFD--VMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 379 WNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYIL 438
W +M++GY+ + E+ LF +M R G N + +S L CA V L+ GK+ H ++
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 439 RRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVAL 498
+ + + N+L+ MY + G + EA +F M+ +D V++ ++IAGY G G VAL
Sbjct: 437 KGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 499 KLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDL 558
+ FE M + +KPD TMVAVLSACSH+GLV +G++ F MT YG+ P +H+ACMVDL
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 559 YGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYY 618
GRAGLL A ++ MP+ P +A+W TLLGA ++H NT + E AA+K+ PENSG Y
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 619 VLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIY 678
VL++N+YA++G W + K+R MRD GV+K+PG +W++ N F V D + + EI+
Sbjct: 616 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 675
Query: 679 PLLGGLTELMKDAGYVVK 696
L L MK AGYV K
Sbjct: 676 AFLEELDLRMKKAGYVSK 693
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 201/448 (44%), Gaps = 45/448 (10%)
Query: 106 EKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQ 165
EKN V L++ Y S AC L ++ + WN L+ +V+ EA +
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 166 MQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWSLFVHNALVSMYGKFGQV 225
M R D ++ +++ + +D R + D +F A+VS Y + V
Sbjct: 245 MNVR----DVVSWNTIITGYAQSGKIDEARQL---FDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 226 DVARRLFDKMLERDAVS-------------------------------WNTMISAYASKG 254
+ AR LFDKM ER+ VS WNTMI+ YA G
Sbjct: 298 EEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCG 357
Query: 255 LWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATV 314
EA LF +M + + ++W + G ++G+ L L +M + L+ +
Sbjct: 358 KISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 315 IGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEK 374
L C+ V AL+LGK++HG V+G Y V NAL+ MY +C + A LFK A K
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 375 SIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFH 434
I++WN+M++GY+ E + F M R G++P+ T+ ++L C+ + G+++
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 435 CYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS-RRDEVTYTSLIAGYGIQGE 493
+ + + + +V++ R+G + +A ++ M D + +L+ + G
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 494 GRVALKLFEEMNKNQIKPDHVTMVAVLS 521
+A +++ ++P++ M +LS
Sbjct: 594 TELAETAADKI--FAMEPENSGMYVLLS 619
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 219/472 (46%), Gaps = 55/472 (11%)
Query: 143 WNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID 202
WN+ IS Y+R G EAL V+K+M R + +Y ++ G + + +F + D
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMIS--GYLRNGEF-ELARKLFD 119
Query: 203 ACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQL 262
E L N ++ Y + + AR LF+ M ERD SWNTM+S YA G +A +
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 263 FVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETY-LDSVATVIGLGACS 321
F M E+ N ++WN + ++ + L +++E + L S ++G
Sbjct: 180 FDRMPEK----NDVSWNALLSAYVQNSKMEEACMLF---KSRENWALVSWNCLLG----- 227
Query: 322 HVGALKLGKEIHGSAVRGCYGEYENVR-----NALITMYSRCKDLRHAYILFKMTAEKSI 376
G +K K + + + NVR N +IT Y++ + A LF + + +
Sbjct: 228 --GFVKKKKIVEARQ----FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 377 ITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCY 436
TW +M+SGY EE+ RE+F E N V+ ++L + ++ KE
Sbjct: 282 FTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERMEMAKE---- 333
Query: 437 ILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRV 496
L M ++ WN+++ YA+ GK+ EAK++FD M +RD V++ ++IAGY G
Sbjct: 334 -LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 497 ALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMV 556
AL+LF +M + + + + + LS C+ + G++ R+ + G + C V
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL--VKGGYET----GCFV 446
Query: 557 D-----LYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWA 603
+Y + G + +A ++ +M + W T++ H G GE A
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRH---GFGEVA 494
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 41/236 (17%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
SF+ + C V AL GKQLH + G E + L+ Y A L +
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
+ + WN +I+ Y R GF AL ++ M+ ++ D+ T +VL AC VD GR
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 196 VVHSCIDACHEWSLFVHNA----LVSMYGKFGQVDVARRLFDKM-LERDAVSWNTMISA- 249
+ ++ + ++ +V + G+ G ++ A L M E DA W T++ A
Sbjct: 531 QYFYTM--TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 250 ---------------------------------YASKGLWKEAFQLFVEMQEEGVE 272
YAS G W + +L V M+++GV+
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 201/654 (30%), Positives = 353/654 (53%), Gaps = 42/654 (6%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
L +A G L + F+ +R+ S + V +F ++ C + G QLH +
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAV--TFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
G++ + L++ Y+ +++A L + + WN +IS YV+ G E+L +
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWSL--FVHNALVSMYGK 221
+M S + D T+ S+L + + ++++ + +H C H SL F+ +AL+ Y K
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH-CYIMRHSISLDIFLTSALIDAYFK 387
Query: 222 FGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTI 281
V +A+ +F + D V + MIS Y GL+ ++ ++F + + + N IT
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT---- 443
Query: 282 AGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCY 341
L S+ VIG+ + ALKLG+E+HG ++ +
Sbjct: 444 --------------------------LVSILPVIGI-----LLALKLGRELHGFIIKKGF 472
Query: 342 GEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFRE 401
N+ A+I MY++C + AY +F+ +++ I++WNSM++ D + +FR+
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 402 MFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSG 461
M SG+ + V+I++ L CA + + GK H ++++ ++ ++ + ++L++MYA+ G
Sbjct: 533 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD-VYSESTLIDMYAKCG 591
Query: 462 KVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEM-NKNQIKPDHVTMVAVL 520
+ A +VF M ++ V++ S+IA G G+ + +L LF EM K+ I+PD +T + ++
Sbjct: 592 NLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 521 SACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPT 580
S+C H G V EG + F MT YGI PQ EH+AC+VDL+GRAG L +A E + MP+ P
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD 711
Query: 581 SAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTC 640
+ +W TLLGAC++H+N + E A+ KL++ P NSGYYVLI+N +A W+ + KVR+
Sbjct: 712 AGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSL 771
Query: 641 MRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYV 694
M++ V+KIPG +W++ F+ D ++ ++ IY LL L ++ GY+
Sbjct: 772 MKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYI 825
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 256/522 (49%), Gaps = 53/522 (10%)
Query: 84 CGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYA---SFSLYNNACFLVE--NSNIR 138
C L QGKQ+HA I + + +++ YA SFS + ++ S+IR
Sbjct: 45 CSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIR 104
Query: 139 YPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMD---VDF-G 194
PWN +IS +VR+G +AL Y +M + D T+P ++KAC + + +DF
Sbjct: 105 ---PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 195 RVVHSCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKG 254
V S C+E FV ++L+ Y ++G++DV +LFD++L++D V WN M++ YA G
Sbjct: 162 DTVSSLGMDCNE---FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 255 LWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATV 314
+ F M+ + + N +T++ +
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCV--------------------------------- 245
Query: 315 IGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEK 374
L C+ + LG ++HG V +++N+L++MYS+C A LF+M +
Sbjct: 246 --LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA 303
Query: 375 SIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFH 434
+TWN M+SGY EES F EM SGV P+ +T +S+LP ++ NL++ K+ H
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 435 CYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEG 494
CYI+R ++ + + L ++L++ Y + V A+++F + D V +T++I+GY G
Sbjct: 364 CYIMRHSI-SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLY 422
Query: 495 RVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFAC 554
+L++F + K +I P+ +T+V++L L ++ ++ G +
Sbjct: 423 IDSLEMFRWLVKVKISPNEITLVSILPVIGIL-LALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 555 MVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRN 596
++D+Y + G +N A EI ++ + W +++ C N
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRCAQSDN 522
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/552 (23%), Positives = 249/552 (45%), Gaps = 41/552 (7%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
+ F G L++A + ++ S DV +F ++ C +K L +L
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDV--STFPCLVKACVALKNFKGIDFLSDTVSSL 167
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
G++ N + L+ Y + + L + + + WN++++ Y + G + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACH-EWSLFVHNALVSMYGKF 222
M+ +I + T+ VL C + +D G +H + ++ + N+L+SMY K
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
G+ D A +LF M D V+WN MIS Y GL +E+ F EM GV + IT++++
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL- 346
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYG 342
L SV+ L C K+IH +R
Sbjct: 347 -------------------------LPSVSKFENLEYC---------KQIHCYIMRHSIS 372
Query: 343 EYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREM 402
+ +ALI Y +C+ + A +F ++ + +M+SGY H +S +FR +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 403 FRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGK 462
+ + PN +T+ SILP+ + L+ G+E H +I+++ F+ + ++++MYA+ G+
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG-FDNRCNIGCAVIDMYAKCGR 491
Query: 463 VPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSA 522
+ A +F+ +S+RD V++ S+I A+ +F +M + I D V++ A LSA
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 523 CSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSA 582
C++ G+ M + + + + ++D+Y + G L A + M +
Sbjct: 552 CANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 583 MWATLLGACQIH 594
W +++ AC H
Sbjct: 611 -WNSIIAACGNH 621
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 209/678 (30%), Positives = 349/678 (51%), Gaps = 51/678 (7%)
Query: 30 INNEHIMRINLLETLKDFAGRGNLSKAFEAFTRIRITAA-SHDVVLDSFAHIIFCCGKVK 88
I N + NL+ + + GN S+ F+ +++ + D +F ++ C +
Sbjct: 112 IQNRDVYAWNLM--ISGYGRAGNSSEVIRCFSLFMLSSGLTPD--YRTFPSVLKAC---R 164
Query: 89 ALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLIS 148
+ G ++H A+ G + + L+ Y+ + NA L + +R WN +IS
Sbjct: 165 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 149 LYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEW 207
Y + G EAL + +++ D+ T S+L AC E D + G +HS I E
Sbjct: 225 GYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 208 SLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQ 267
LFV N L+ +Y +FG++ +++FD+M RD +SWN++I AY A LF EM+
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 268 EEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALK 327
LSR++ L S+A+++ S +G ++
Sbjct: 341 ------------------------------LSRIQPDCLTLISLASIL-----SQLGDIR 365
Query: 328 LGKEIHGSAVR-GCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGY 386
+ + G +R G + E + NA++ MY++ + A +F +I+WN+++SGY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 387 THLDCAEESAFLFREMFRSG-VEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNE 445
A E+ ++ M G + N T S+LP C++ L+ G + H +L+ ++ +
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 446 HLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMN 505
+ + SL +MY + G++ +A S+F + R + V + +LIA +G G G A+ LF+EM
Sbjct: 486 -VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 506 KNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLL 565
+KPDH+T V +LSACSHSGLV EGQ FE M + YGI P L+H+ CMVD+YGRAG L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 566 NKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMY 625
A + I M P +++W LL AC++H N +G+ A+E L E PE+ GY+VL++NMY
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 664
Query: 626 AATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLT 685
A+ G W+ + ++R+ G+RK PG + ++ N F + ++ +E+Y L L
Sbjct: 665 ASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQ 724
Query: 686 ELMKDAGYVVKEEFCSEE 703
+K GYV F ++
Sbjct: 725 AKLKMIGYVPDHRFVLQD 742
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 175/380 (46%), Gaps = 55/380 (14%)
Query: 215 LVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVN 274
LV++Y G V +AR FD + RD +WN MIS Y G E + F
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM------- 144
Query: 275 VITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHG 334
L +G L RT + L + TVI G +IH
Sbjct: 145 -----------LSSG-------LTPDYRTFPSVLKACRTVID------------GNKIHC 174
Query: 335 SAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEE 394
A++ + V +LI +YSR K + +A ILF + + +WN+M+SGY A+E
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 395 SAFL---FREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWN 451
+ L R M + VT+ S+L C + G H Y ++ + +E L + N
Sbjct: 235 ALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE-LFVSN 286
Query: 452 SLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKP 511
L+++YA G++ + + VFD M RD +++ S+I Y + + A+ LF+EM ++I+P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 512 DHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA---CMVDLYGRAGLLNKA 568
D +T++++ S S G + + + T G F LE +V +Y + GL++ A
Sbjct: 347 DCLTLISLASILSQLG-DIRACRSVQGFTLRKGWF--LEDITIGNAVVVMYAKLGLVDSA 403
Query: 569 KEIITKMPYTPTSAMWATLL 588
+ + +P T + W T++
Sbjct: 404 RAVFNWLPNTDVIS-WNTII 422
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 351 LITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFRE-MFRSGVEP 409
L+ +Y ++ A F + + WN M+SGY + E F M SG+ P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 410 NYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSV 469
+Y T S+L C V + G + HC L+ F + + SL+ +Y+R V A+ +
Sbjct: 152 DYRTFPSVLKACRTVID---GNKIHCLALKFG-FMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 470 FDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKP-DHVTMVAVLSACSHSGL 528
FD M RD ++ ++I+GY G + AL L N ++ D VT+V++LSAC+ +G
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAG- 261
Query: 529 VVEGQKQFERMTSI------YGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSA 582
F R +I +G+ +L ++DLY G L +++ +M Y
Sbjct: 262 ------DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM-YVRDLI 314
Query: 583 MWATLLGACQIH 594
W +++ A +++
Sbjct: 315 SWNSIIKAYELN 326
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 395 SAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLV 454
SA ++ +++G E I + L NLQ K H ++ +++ + LV
Sbjct: 37 SANALQDCWKNGNESK--EIDDVHTLFRYCTNLQSAKCLHARLVVSKQI-QNVCISAKLV 93
Query: 455 EMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEE-MNKNQIKPDH 513
+Y G V A+ FD + RD + +I+GYG G ++ F M + + PD+
Sbjct: 94 NLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDY 153
Query: 514 VTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIIT 573
T +VL AC V++G K + +G + A ++ LY R + A+ +
Sbjct: 154 RTFPSVLKACR---TVIDGNK-IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 574 KMPYTPTSAMWATLLGACQ 592
+MP + A + G CQ
Sbjct: 210 EMPVRDMGSWNAMISGYCQ 228
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 342 bits (877), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 326/618 (52%), Gaps = 41/618 (6%)
Query: 93 GKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVR 152
G+ +H A+ G + +L +V Y F +A + + + + WN +IS Y +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 153 DGFYAEALCVYKQMQSRR-IRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWSL-F 210
+ Y E++ V++ + + R D T +L A E+ ++ G +HS +S +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 211 VHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEG 270
V +S+Y K G++ + LF + + D V++N MI Y S G + + LF E+ G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 271 VEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGK 330
+R+R+ +T++ L S G L L
Sbjct: 318 ----------------------------ARLRS--------STLVSLVPVS--GHLMLIY 339
Query: 331 EIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLD 390
IHG ++ + + +V AL T+YS+ ++ A LF + EKS+ +WN+M+SGYT
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 391 CAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLW 450
E++ LFREM +S PN VTI IL CA++ L GK H ++R F + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVS 458
Query: 451 NSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIK 510
+L+ MYA+ G + EA+ +FDLM++++EVT+ ++I+GYG+ G+G+ AL +F EM + I
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 511 PDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKE 570
P VT + VL ACSH+GLV EG + F M YG P ++H+ACMVD+ GRAG L +A +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 571 IITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGC 630
I M P S++W TLLGAC+IH++T + +EKL E P+N GY+VL++N+++A
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638
Query: 631 WDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKD 690
+ + A VR + + K PG ++ G F D S+ Q +EIY L L M++
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Query: 691 AGYVVKEEFCSEEEIVEE 708
AGY + E + EE
Sbjct: 699 AGYQPETELALHDVEEEE 716
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 241/522 (46%), Gaps = 64/522 (12%)
Query: 86 KVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFS--LYNNACFL-VENSNIRYPLP 142
+ +++ Q HA I G + L+ KL + Y FL V+ ++
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV---FL 85
Query: 143 WNLLISLYVRDGFYAEALCVYKQM-QSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH--S 199
+N+L+ + + +L V+ + +S ++ ++ TY + A D GRV+H +
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 200 CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEA 259
+D C + L + + +V MY KF +V+ AR++FD+M E+D + WNTMIS Y ++ E+
Sbjct: 146 VVDGC-DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 260 FQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGA 319
Q+F ++ E C R LD+ + L A
Sbjct: 205 IQVFRDLINE--------------SCTR--------------------LDTTTLLDILPA 230
Query: 320 CSHVGALKLGKEIHGSAVR-GCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIIT 378
+ + L+LG +IH A + GCY ++ V I++YS+C ++ LF+ + I+
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYS-HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 379 WNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYIL 438
+N+M+ GYT E S LF+E+ SG T+ S++P+ + + H Y L
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCL 346
Query: 439 RRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVAL 498
++ F H + +L +Y++ ++ A+ +FD + ++ ++I+GY G A+
Sbjct: 347 -KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 499 KLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQ------KQFERMTSIYGIFPQLEHF 552
LF EM K++ P+ VT+ +LSAC+ G + G+ + + +SIY
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV-------S 458
Query: 553 ACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIH 594
++ +Y + G + +A+ + M W T++ +H
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 193/444 (43%), Gaps = 42/444 (9%)
Query: 80 IIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRY 139
I+ +++ L G Q+H+ A G + ++ ++ Y+ L
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 140 PLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS 199
+ +N +I Y +G +L ++K++ R + T S++ G +M + +H
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHG 343
Query: 200 -CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKE 258
C+ + V AL ++Y K +++ AR+LFD+ E+ SWN MIS Y GL ++
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 259 AFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLG 318
A LF EMQ+ N +T I L
Sbjct: 404 AISLFREMQKSEFSPNPVTITCI-----------------------------------LS 428
Query: 319 ACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIIT 378
AC+ +GAL LGK +H + V ALI MY++C + A LF + +K+ +T
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 379 WNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYIL 438
WN+M+SGY +E+ +F EM SG+ P VT +L C+ ++ G E ++
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 439 RRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS-RRDEVTYTSLIAGYGIQGEGRVA 497
R F + + +V++ R+G + A + MS + +L+ I + +A
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 498 LKLFEEMNKNQIKPDHVTMVAVLS 521
+ E++ ++ PD+V +LS
Sbjct: 609 RTVSEKL--FELDPDNVGYHVLLS 630
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 328/622 (52%), Gaps = 52/622 (8%)
Query: 88 KALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLI 147
+ L GKQ+HA + G E N ++ LV Y ++ L+ + R + WN ++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 148 SLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS--CIDACH 205
S ++ EAL ++M + D FT SVL AC + + G+ +H+ +
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 206 EWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVE 265
+ + FV +ALV MY QV RR+FD M +R WN MI+ Y+ KEA LF+
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 266 MQEE-GVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVG 324
M+E G+ N T + C+R+G F SR
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAF-------SRKEA--------------------- 426
Query: 325 ALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLS 384
IHG V+ V+N L+ MYSR + A +F ++ ++TWN+M++
Sbjct: 427 -------IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 385 GYTHLDCAEESAFLFREM-----------FRSGVEPNYVTIASILPLCARVANLQHGKEF 433
GY + E++ L +M R ++PN +T+ +ILP CA ++ L GKE
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 434 HCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGE 493
H Y ++ + + + + ++LV+MYA+ G + ++ VFD + +++ +T+ +I YG+ G
Sbjct: 540 HAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 494 GRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA 553
G+ A+ L M +KP+ VT ++V +ACSHSG+V EG + F M YG+ P +H+A
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 554 CMVDLYGRAGLLNKAKEIITKMPYTPTSA-MWATLLGACQIHRNTGIGEWAAEKLLETRP 612
C+VDL GRAG + +A +++ MP A W++LLGA +IH N IGE AA+ L++ P
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718
Query: 613 ENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNV 672
+ +YVL+AN+Y++ G WDK +VR M++ GVRK PGC+W++ G+ F+ D+S+
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 778
Query: 673 QAQEIYPLLGGLTELMKDAGYV 694
Q++++ L L E M+ GYV
Sbjct: 779 QSEKLSGYLETLWERMRKEGYV 800
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 214/456 (46%), Gaps = 61/456 (13%)
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFG 194
S R P W L+ VR EA+ Y M I+ DN+ +P++LKA ++ D++ G
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 195 RVVHSCIDACHEW-------SLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMI 247
+ +H+ H + S+ V N LV++Y K G ++FD++ ER+ VSWN++I
Sbjct: 117 KQIHA-----HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 171
Query: 248 SAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETY 307
S+ S W+ A + F M +E VE + T ++ C S + E
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC-------------SNLPMPE-- 216
Query: 308 LDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYEN-VRNALITMYSRCKDLRHAYI 366
L +GK++H +R GE + + N L+ MY + L + +
Sbjct: 217 -----------------GLMMGKQVHAYGLRK--GELNSFIINTLVAMYGKLGKLASSKV 257
Query: 367 LFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVAN 426
L + ++TWN++LS + E+ REM GVEP+ TI+S+LP C+ +
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 427 LQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIA 486
L+ GKE H Y L+ +E+ + ++LV+MY +V + VFD M R + ++IA
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 487 GYGIQGEGRVALKLFEEMNKNQ-IKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGI 545
GY + AL LF M ++ + + TM V+ AC SG F R +I+G
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG-------AFSRKEAIHGF 430
Query: 546 FPQ----LEHFA--CMVDLYGRAGLLNKAKEIITKM 575
+ + F ++D+Y R G ++ A I KM
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 243/538 (45%), Gaps = 55/538 (10%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPK-LVTFYASFSLYNNACFLVEN 134
+F ++ ++ + GKQ+HA G + V V LV Y + + +
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEM---MDV 191
+ R + WN LIS + AL ++ M + +FT SV+ AC + +
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 192 DFGRVVHSCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYA 251
G+ VH+ E + F+ N LV+MYGK G++ ++ L RD V+WNT++S+
Sbjct: 219 MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 252 SKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSV 311
EA + EM EGVE + T +++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSV------------------------------ 308
Query: 312 ATVIGLGACSHVGALKLGKEIHGSAVR-GCYGEYENVRNALITMYSRCKDLRHAYILFKM 370
L ACSH+ L+ GKE+H A++ G E V +AL+ MY CK + +F
Sbjct: 309 -----LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 371 TAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRS-GVEPNYVTIASILPLCARVANLQH 429
++ I WN+M++GY+ + +E+ LF M S G+ N T+A ++P C R
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 430 GKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYG 489
+ H ++++R + + + N+L++MY+R GK+ A +F M RD VT+ ++I GY
Sbjct: 424 KEAIHGFVVKRGL-DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 490 IQGEGRVALKLFEEM-----------NKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFER 538
AL L +M ++ +KP+ +T++ +L +C+ + +G K+
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-KEIHA 541
Query: 539 MTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRN 596
+ + + +VD+Y + G L ++++ ++P W ++ A +H N
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+ A ++ C + A ++ + +H + GL+++ + L+ Y+ + A +
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQS--RRI---------RGDNFTYPSVLKA 184
R + WN +I+ YV + +AL + +MQ+ R++ + ++ T ++L +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 185 CGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSW 243
C + + G+ +H+ I + V +ALV MY K G + ++R++FD++ +++ ++W
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586
Query: 244 NTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRT 303
N +I AY G +EA L M +GV+ N +T+ ++ C +G L + M+
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 304 Q---ETYLDSVATVIGL 317
E D A V+ L
Sbjct: 647 DYGVEPSSDHYACVVDL 663
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 379 WNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYIL 438
W +L + E+ + +M G++P+ ++L A + +++ GK+ H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 439 RRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVAL 498
+ + + + N+LV +Y + G VFD +S R++V++ SLI+ + +AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 499 KLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFP-QLEHFA--CM 555
+ F M ++P T+V+V++ACS+ L + + YG+ +L F +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSN--LPMPEGLMMGKQVHAYGLRKGELNSFIINTL 242
Query: 556 VDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGA-CQIHRNTGIGEWAAEKLLE 609
V +YG+ G L +K ++ W T+L + CQ + E+ E +LE
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDL-VTWNTVLSSLCQNEQLLEALEYLREMVLE 296
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/649 (33%), Positives = 327/649 (50%), Gaps = 76/649 (11%)
Query: 57 FEAFTRIRITAASHDVVLD--SFAHIIFCCGKV----KALAQGKQLHACAIALGLEKNPV 110
F F +++++ + LD S +F G+V + + +H+ I L N
Sbjct: 16 FRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSS 75
Query: 111 LVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRR 170
L KL+ YAS +A + + R + N++I YV +GFY E + V+ M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 171 IRGDNFTYPSVLKACGEMMDVDFGRVVH-SCIDACHEWSLFVHNALVSMYGKFGQVDVAR 229
+R D++T+P VLKAC + GR +H S +LFV N LVSMYGK G + AR
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 230 RLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTG 289
+ D+M R +V++WN++ G +
Sbjct: 196 LVLDEMSRR-----------------------------------DVVSWNSLVVGYAQNQ 220
Query: 290 NFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRN 349
F LE+ M + + D+ L A S+ ENV
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-------------------ENV-- 259
Query: 350 ALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEP 409
MY KD+ FKM +KS+++WN M+ Y E+ L+ M G EP
Sbjct: 260 ----MY--VKDM-----FFKM-GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 410 NYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSV 469
+ V+I S+LP C + L GK+ H YI R+ + +LLL N+L++MYA+ G + +A+ V
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDV 366
Query: 470 FDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLV 529
F+ M RD V++T++I+ YG G G A+ LF ++ + + PD + V L+ACSH+GL+
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 530 VEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLG 589
EG+ F+ MT Y I P+LEH ACMVDL GRAG + +A I M P +W LLG
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 590 ACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKI 649
AC++H +T IG AA+KL + PE SGYYVL++N+YA G W+++ +R M+ G++K
Sbjct: 487 ACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Query: 650 PGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEE 698
PG + V+ + FLV D S+ Q+ EIY L L + MK+ GYV E
Sbjct: 547 PGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSE 595
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 55 KAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPK 114
+A E ++R+ D V S ++ CG AL+ GK++H L N +L
Sbjct: 292 EAVELYSRMEADGFEPDAV--SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 115 LVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGD 174
L+ YA A + EN R + W +IS Y G +A+ ++ ++Q + D
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 175 NFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWSLFVHN--ALVSMYGKFGQVDVARRLF 232
+ + + L AC ++ GR + ++ + + + +V + G+ G+V A R
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI 469
Query: 233 DKM-LERDAVSWNTMISA 249
M +E + W ++ A
Sbjct: 470 QDMSMEPNERVWGALLGA 487
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 330/634 (52%), Gaps = 44/634 (6%)
Query: 115 LVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGD 174
+++ Y+ ++ C + R + W +I Y G Y +A+ V M I
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 175 NFTYPSVLKACGEMMDVDFGRVVHSCIDACH-EWSLFVHNALVSMYGKFGQVDVARRLFD 233
FT +VL + ++ G+ VHS I ++ V N+L++MY K G +A+ +FD
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 234 KMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKG 293
+M+ RD SWN MI+ + G A F +M E +++TWN++ G + G
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFNQRGYDLR 261
Query: 294 VLELLSRM-RTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALI 352
L++ S+M R D L AC+++ L +GK+IH V + V NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 353 TMYSRC---------------KDLR--------HAYI----------LFKMTAEKSIITW 379
+MYSRC KDL+ YI +F ++ ++ W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 380 NSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILR 439
+M+ GY E+ LFR M G PN T+A++L + + +A+L HGK+ H ++
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 440 RAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS-RRDEVTYTSLIAGYGIQGEGRVAL 498
+ + N+L+ MYA++G + A FDL+ RD V++TS+I G AL
Sbjct: 442 SGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 499 KLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDL 558
+LFE M ++PDH+T V V SAC+H+GLV +G++ F+ M + I P L H+ACMVDL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 559 YGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYY 618
+GRAGLL +A+E I KMP P W +LL AC++H+N +G+ AAE+LL PENSG Y
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 619 VLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIY 678
+AN+Y+A G W++ AK+R M+D V+K G +W++ + F V+D ++ + EIY
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Query: 679 PLLGGLTELMKDAGYVVKEEFC---SEEEIVEEI 709
+ + + +K GYV EEE+ E+I
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 714
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 41/449 (9%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+ +++ + + GK++H+ + LGL N + L+ YA A F+ +
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRI------------RG---------- 173
+R WN +I+L+++ G A+ ++QM R I RG
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 174 ----------DNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKF 222
D FT SVL AC + + G+ +HS + + S V NAL+SMY +
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 223 GQVDVARRLFDKMLERDAV--SWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNT 280
G V+ ARRL ++ +D + ++ Y G +A +FV +++ +V+ W
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTA 383
Query: 281 IAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGC 340
+ G + G++ + L M +S L S + +L GK+IHGSAV+
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 341 YGEYENVRNALITMYSRCKDLRHAYILFKMT-AEKSIITWNSMLSGYTHLDCAEESAFLF 399
+V NALITMY++ ++ A F + E+ ++W SM+ AEE+ LF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 400 REMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYAR 459
M G+ P+++T + C + G+++ + L + +V+++ R
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 460 SGKVPEAKSVFDLMS-RRDEVTYTSLIAG 487
+G + EA+ + M D VT+ SL++
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 207/483 (42%), Gaps = 83/483 (17%)
Query: 207 WSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEM 266
+S+++ N L+++Y K G AR+LFD+M R A SWNT++SAY+ +G + F ++
Sbjct: 47 FSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
Query: 267 QEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGAL 326
+ + ++W T+ G G + + ++ M + L + + +
Sbjct: 107 PQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 327 KLGKEIHGSAVR-GCYGEYENVRNALITMYSRCKD------------------------- 360
+ GK++H V+ G G +V N+L+ MY++C D
Sbjct: 163 ETGKKVHSFIVKLGLRGNV-SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 361 ------LRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFR-SGVEPNYVT 413
+ A F+ AE+ I+TWNSM+SG+ + +F +M R S + P+ T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 414 IASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP--------- 464
+AS+L CA + L GK+ H +I+ F+ ++ N+L+ MY+R G V
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTG-FDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 465 ------------------------EAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKL 500
+AK++F + RD V +T++I GY G A+ L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 501 FEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYG 560
F M +P+ T+ A+LS S + G KQ G + ++ +Y
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHG-KQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 561 RAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLET------RPEN 614
+AG + A + + W +++ A H G E A E L ET RP++
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQH---GHAEEALE-LFETMLMEGLRPDH 515
Query: 615 SGY 617
Y
Sbjct: 516 ITY 518
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 331/616 (53%), Gaps = 38/616 (6%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+F ++I G + G+ +H + G + V+ LV YA F+L+ N+ + +
Sbjct: 109 TFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEM 168
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
R WN +IS + + G +AL ++ +M+S ++ + + AC ++ ++ G+
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK 228
Query: 196 VVH-SCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKG 254
+H C+ E +V++ALV MYGK ++VAR +F KM +
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK---------------- 272
Query: 255 LWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATV 314
+++ WN++ G + G+ K +E+L+RM + T
Sbjct: 273 -------------------SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 315 IGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEK 374
L ACS L GK IHG +R V +LI +Y +C + A +F T +
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 375 SIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFH 434
+WN M+S Y + ++ ++ +M GV+P+ VT S+LP C+++A L+ GK+ H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 435 CYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEG 494
I + + LLL ++L++MY++ G EA +F+ + ++D V++T +I+ YG G+
Sbjct: 434 LSISESRLETDELLL-SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQP 492
Query: 495 RVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFAC 554
R AL F+EM K +KPD VT++AVLSAC H+GL+ EG K F +M S YGI P +EH++C
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSC 552
Query: 555 MVDLYGRAGLLNKAKEIITKMPYTPTSA-MWATLLGACQIHRNTGIGEWAAEKLLETRPE 613
M+D+ GRAG L +A EII + P T +A + +TL AC +H +G+ A L+E P+
Sbjct: 553 MIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPD 612
Query: 614 NSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQ 673
++ Y+++ N+YA+ WD +VR M+++G+RK PGC+W++ + F +D S+++
Sbjct: 613 DASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLR 672
Query: 674 AQEIYPLLGGLTELMK 689
A+ +Y L L+ M+
Sbjct: 673 AENVYECLALLSGHME 688
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 254/515 (49%), Gaps = 41/515 (7%)
Query: 83 CCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPL- 141
C K+L + K +H + LGL ++ VL L+ Y + + +A + EN +IR +
Sbjct: 13 CTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVY 72
Query: 142 PWNLLISLYVRDGFYAEALCVYKQMQSRRI-RGDNFTYPSVLKACGEMMDVDFGRVVHS- 199
WN L+S Y ++ + + L V+K++ + I D+FT+P+V+KA G + GR++H+
Sbjct: 73 IWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTL 132
Query: 200 CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEA 259
+ + + + V ++LV MY KF + + ++FD+M ERD SWNT+IS + G ++A
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 260 FQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGA 319
+LF M+ G E N SV+ + + A
Sbjct: 193 LELFGRMESSGFEPN-----------------------------------SVSLTVAISA 217
Query: 320 CSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITW 379
CS + L+ GKEIH V+ + E V +AL+ MY +C L A +F+ KS++ W
Sbjct: 218 CSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAW 277
Query: 380 NSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILR 439
NSM+ GY ++ + M G P+ T+ SIL C+R NL HGK H Y++
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI- 336
Query: 440 RAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALK 499
R++ N + + SL+++Y + G+ A++VF + ++ +I+ Y G A++
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 500 LFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLY 559
++++M +KPD VT +VL ACS + +G KQ S + + ++D+Y
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG-KQIHLSISESRLETDELLLSALLDMY 455
Query: 560 GRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIH 594
+ G +A I +P + W ++ A H
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSH 489
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 314/627 (50%), Gaps = 71/627 (11%)
Query: 143 WNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID 202
WNL I V E+L ++++M+ +NFT+P V KAC + DV +VH+ +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 203 ACHEWS-LFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQ 261
WS +FV A V M+ K VD A ++F++M ERDA +WN M+S + G +AF
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 262 LFVEMQ-----------------------------------EEGVEVNVI---TWNTIAG 283
LF EM+ GV+V V TW + G
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 284 GCLRTGNFKGVLELLSR-----------------------------MRTQETYLDSVATV 314
C + K V E + R + +E + ++T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 315 IGLGA-CSHVGALKLGKEIHGSAVR-GCYGEYENVRNALITMYSRCKDLRHAYILFKMTA 372
I L A C + L G+ IH A+ G + E + N I+MYS+ +D A +LF +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI-NTFISMYSKSEDTCSARLLFDIMT 318
Query: 373 EKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKE 432
++ ++W M+SGY +E+ LF M +SG +P+ VT+ S++ C + +L+ GK
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 433 FHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQG 492
+++++ N+L++MY++ G + EA+ +FD + VT+T++IAGY + G
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 493 EGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHF 552
ALKLF +M KP+H+T +AVL AC+HSG + +G + F M +Y I P L+H+
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 553 ACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRP 612
+CMVDL GR G L +A E+I M P + +W LL AC+IHRN I E AAE L P
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558
Query: 613 ENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNV 672
+ + YV +AN+YAA G WD A++R+ M+ ++K PG + + F V + +V
Sbjct: 559 QMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHV 618
Query: 673 QAQEIYPLLGGLTELMKDAGYVVKEEF 699
+ + IY L GL+ KD + K+ +
Sbjct: 619 ENEVIYFTLNGLSLFAKDKHVLYKDVY 645
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 214/486 (44%), Gaps = 44/486 (9%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
L F G+ KAF F +R+ + D V + +I K+L + +HA I L
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSV--TVMTLIQSASFEKSLKLLEAMHAVGIRL 182
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVE--NSNIRYPLPWNLLISLYVRDGFYAEALC 161
G++ + ++ Y ++A + E + R + WN + Y G +A
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 162 VYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYG 220
+Y M + D T+ ++ +C + GR++HS I + + N +SMY
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 221 KFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNT 280
K AR LFD M R VSW MIS YA KG EA LF M + G + +++T +
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 281 IAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSA-VRG 339
+ GC G F G+L+ GK I A + G
Sbjct: 363 LISGC---GKF--------------------------------GSLETGKWIDARADIYG 387
Query: 340 CYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLF 399
C + + NALI MYS+C + A +F T EK+++TW +M++GY E+ LF
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 400 REMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYAR 459
+M +PN++T ++L CA +L+ G E+ + + + L ++ +V++ R
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 460 SGKVPEAKSVFDLMSRR-DEVTYTSLIAGYGIQGEGRVALKLFEEMN--KNQIKPDHVTM 516
GK+ EA + MS + D + +L+ I ++A + E + + Q+ +V M
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEM 567
Query: 517 VAVLSA 522
+ +A
Sbjct: 568 ANIYAA 573
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 367 LFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVAN 426
L++++ S+ WN + + + ES LFREM R G EPN T + CAR+A+
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 427 LQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIA 486
+ + H ++++ +++ + + + V+M+ + V A VF+ M RD T+ ++++
Sbjct: 68 VGCCEMVHAHLIKSPFWSD-VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 487 GYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSI---Y 543
G+ G A LF EM N+I PD VT++ ++ + S + K E M ++
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFE----KSLKLLEAMHAVGIRL 182
Query: 544 GIFPQLEHFACMVDLYGRAGLLNKAK---EIITKMPYTPTSAMWATLLGACQI 593
G+ Q+ + YG+ G L+ AK E I + T S W ++ A +
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS--WNSMFKAYSV 233
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 332 bits (852), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 222/658 (33%), Positives = 341/658 (51%), Gaps = 50/658 (7%)
Query: 63 IRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPK-LVTFYAS 121
I ++ S+ ++L SF + + L +G+++H I GL V + LV YA
Sbjct: 304 IDVSPESYVILLSSFPE--YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 122 FSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSV 181
+A + + + WN +I+ ++G + EA+ YK M+ I +FT S
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 182 LKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDA 240
L +C + G+ +H + + ++ V NAL+++Y + G ++ R++F M E D
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 241 VSWNTMISAYA-SKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLS 299
VSWN++I A A S+ EA F+ Q G ++N IT++++
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL----------------- 524
Query: 300 RMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCK 359
S + + G +LGK+IHG A++ + NALI Y +C
Sbjct: 525 ----------SAVSSLSFG--------ELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 360 DLRHAYILFKMTAE-KSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASIL 418
++ +F AE + +TWNSM+SGY H + ++ L M ++G + A++L
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 419 PLCARVANLQHGKEFH-CYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRD 477
A VA L+ G E H C + RA +++ ++LV+MY++ G++ A F+ M R+
Sbjct: 627 SAFASVATLERGMEVHACSV--RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 478 EVTYTSLIAGYGIQGEGRVALKLFEEMN-KNQIKPDHVTMVAVLSACSHSGLVVEGQKQF 536
++ S+I+GY G+G ALKLFE M Q PDHVT V VLSACSH+GL+ EG K F
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 537 ERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGAC--QIH 594
E M+ YG+ P++EHF+CM D+ GRAG L+K ++ I KMP P +W T+LGAC
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANG 804
Query: 595 RNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAW 654
R +G+ AAE L + PEN+ YVL+ NMYAA G W+ L K R M+D V+K G +W
Sbjct: 805 RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSW 864
Query: 655 VDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEFC---SEEEIVEEI 709
V + F+ D S+ A IY L L M+DAGYV + F E+E EEI
Sbjct: 865 VTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEI 922
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 216/500 (43%), Gaps = 55/500 (11%)
Query: 105 LEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYK 164
L+K+ L L+ Y +A + + +R + W ++S Y R+G + EAL +
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 165 QMQSRRIRGDNFTYPSVLKACGEMMDVD--FGRVVHSCI-DACHEWSLFVHNALVSMYGK 221
M I + + + SVL+AC E+ V FGR +H + + V N L+SMY K
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 222 -FGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNT 280
G V A F + +++VS WN+
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVS-----------------------------------WNS 176
Query: 281 IAGGCLRTGNFKGVLELLSRM-----RTQETYLDSVATVIGLGACSHVGA-LKLGKEIHG 334
I + G+ + + S M R E S+ T ACS ++L ++I
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT----ACSLTEPDVRLLEQIMC 232
Query: 335 SAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEE 394
+ + V + L++ +++ L +A +F ++ +T N ++ G EE
Sbjct: 233 TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 395 SAFLFREMFRS-GVEP-NYVTIASILP--LCARVANLQHGKEFHCYILRRAMFNEHLLLW 450
+ LF +M V P +YV + S P A L+ G+E H +++ + + + +
Sbjct: 293 ATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 451 NSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIK 510
N LV MYA+ G + +A+ VF M+ +D V++ S+I G G A++ ++ M ++ I
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 511 PDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKE 570
P T+++ LS+C+ GQ Q + GI + ++ LY G LN+ ++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQ-QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 571 IITKMPYTPTSAMWATLLGA 590
I + MP W +++GA
Sbjct: 472 IFSSMP-EHDQVSWNSIIGA 490
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 188/420 (44%), Gaps = 23/420 (5%)
Query: 230 RLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTG 289
RL+ L++D N +I+AY G A ++F EM N ++W I G R G
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR----NCVSWACIVSGYSRNG 81
Query: 290 NFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKL--GKEIHGSAVRGCYGEYENV 347
K L L M + + + A V L AC +G++ + G++IHG + Y V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 348 RNALITMYSRC-KDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSG 406
N LI+MY +C + +A F K+ ++WNS++S Y+ + +F M G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 407 VEPNYVTIASILPLCARVA--NLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP 464
P T S++ + +++ ++ C I + + + L + + LV +A+SG +
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD-LFVGSGLVSAFAKSGSLS 260
Query: 465 EAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACS 524
A+ VF+ M R+ VT L+ G Q G A KLF +MN + I + V +LS+
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFP 319
Query: 525 HSGLVVEGQKQFERMTSIYGIFPQLEHFAC-----MVDLYGRAGLLNKAKEIITKMPYTP 579
L E + R + I L F +V++Y + G + A+ + M
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DK 378
Query: 580 TSAMWATLLGACQIHRNTGIGEWAAEKLLETRPEN--SGYYVLIANMYA-ATGCWDKLAK 636
S W +++ + +N E A E+ R + G + LI+++ + A+ W KL +
Sbjct: 379 DSVSWNSMITG--LDQNGCFIE-AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 433 FHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQG 492
FH + + + ++ + L N+L+ Y +G A+ VFD M R+ V++ +++GY G
Sbjct: 23 FHSRLYKNRL-DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 493 EGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLV 529
E + AL +M K I + V+VL AC G V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 322/601 (53%), Gaps = 44/601 (7%)
Query: 137 IRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRV 196
+R + +N +I+ + + A+ ++ +M+ + DNFT+ SVL + D D +
Sbjct: 110 MRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVAD-DEKQC 168
Query: 197 VH---SCIDACHEWSLFVHNALVSMYGKFGQ----VDVARRLFDKMLERDAVSWNTMISA 249
V + + + + V NALVS+Y K + AR++FD++LE+D SW TM++
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 250 YASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLD 309
Y G + +L M + + ++ +N + G + G ++ LE++ RM + LD
Sbjct: 229 YVKNGYFDLGEELLEGMDDN---MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 310 SVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFK 369
+ AC+ G L+LGK++H +R + + N+L+++Y +C A +F+
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFE 344
Query: 370 MTAEKSIITWNSMLSGYTHLDCAEESAFLFREMF-------------------------- 403
K +++WN++LSGY E+ +F+EM
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 404 -----RSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYA 458
R G EP + + CA + +G+++H +L+ F+ L N+L+ MYA
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG-FDSSLSAGNALITMYA 463
Query: 459 RSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVA 518
+ G V EA+ VF M D V++ +LIA G G G A+ ++EEM K I+PD +T++
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 519 VLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYT 578
VL+ACSH+GLV +G+K F+ M ++Y I P +H+A ++DL R+G + A+ +I +P+
Sbjct: 524 VLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFK 583
Query: 579 PTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVR 638
PT+ +W LL C++H N +G AA+KL PE+ G Y+L++NM+AATG W+++A+VR
Sbjct: 584 PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVR 643
Query: 639 TCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEE 698
MRD GV+K C+W++ FLVDDTS+ +A+ +Y L L + M+ GYV
Sbjct: 644 KLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Query: 699 F 699
F
Sbjct: 704 F 704
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 200/474 (42%), Gaps = 82/474 (17%)
Query: 213 NALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVE 272
N L+ +Y K +++ AR+LFD++ E D ++ TM+S Y + G A +F E
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVF-----EKAP 107
Query: 273 V---NVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVG-ALKL 328
V + + +N + G + + L +M+ + D+ L + V K
Sbjct: 108 VCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQ 167
Query: 329 GKEIHGSAVRGCYGEYENVRNALITMYSRCKD----LRHAYILFKMTAEKS--------- 375
+ H +A++ G +V NAL+++YS+C L A +F EK
Sbjct: 168 CVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 376 -----------------------IITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYV 412
++ +N+M+SGY + +E+ + R M SG+E +
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 413 TIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDL 472
T S++ CA LQ GK+ H Y+LRR F+ H NSLV +Y + GK EA+++F+
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD--NSLVSLYYKCGKFDEARAIFEK 345
Query: 473 MSRRDEVTYTSLIAGYGIQGE-------------------------------GRVALKLF 501
M +D V++ +L++GY G G LKLF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 502 EEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGR 561
M + +P + +C+ G GQ+ ++ I G L ++ +Y +
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAK 464
Query: 562 AGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLET--RPE 613
G++ +A+++ MP S W L+ A H + E++L+ RP+
Sbjct: 465 CGVVEEARQVFRTMP-CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 151/376 (40%), Gaps = 72/376 (19%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAH--IIFCCGKVKALAQGKQLHACAI 101
+ + RG +A E R+ S + LD F + +I C L GKQ+HA +
Sbjct: 258 ISGYVNRGFYQEALEMVRRM----VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 102 ALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALC 161
+ + LV+ Y ++ A + E + + WN L+S YV G EA
Sbjct: 314 RRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 162 VYKQMQSRRIRG---------------DNFTYPSVLKACG-EMMDVDFGRVVHSC----- 200
++K+M+ + I + S +K G E D F + SC
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 201 -----------IDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISA 249
+ + SL NAL++MY K G V+ AR++F M D+VSWN +I+A
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 250 YASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLD 309
G EA ++ EM ++G+ + IT T+ C G L+ + R Y D
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG-------LVDQGR---KYFD 542
Query: 310 SVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFK 369
S+ TV + GA + I G + + E+V +L FK
Sbjct: 543 SMETVYRIPP----GADHYARLIDLLCRSGKFSDAESVIESLP---------------FK 583
Query: 370 MTAEKSIITWNSMLSG 385
TAE W ++LSG
Sbjct: 584 PTAE----IWEALLSG 595
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 39/151 (25%)
Query: 418 LPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSR-- 475
LPL R +LQ + H I+ F + N L+++Y +S ++ A+ +FD +S
Sbjct: 23 LPL--RRTSLQLARAVHGNIITFG-FQPRAHILNRLIDVYCKSSELNYARQLFDEISEPD 79
Query: 476 -------------------------------RDEVTYTSLIAGYGIQGEGRVALKLFEEM 504
RD V Y ++I G+ +G A+ LF +M
Sbjct: 80 KIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM 139
Query: 505 NKNQIKPDHVTMVAVLSACSHSGLVVEGQKQ 535
KPD+ T +VL+ + LV + +KQ
Sbjct: 140 KHEGFKPDNFTFASVLAGLA---LVADDEKQ 167
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 338/646 (52%), Gaps = 49/646 (7%)
Query: 58 EAFTRIRITAASHDVVLDSFAHIIF------CCGKVKALAQGKQLHACAIALGLEKNPVL 111
EAF R S L H+ F C V A G Q+HA A+ LG + NP L
Sbjct: 128 EAFKLFRQMCRSSSCTLPD--HVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFL 184
Query: 112 VPK--LVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSR 169
L+ Y + AC L E + + +N LI+ Y +DG Y E++ ++ +M+
Sbjct: 185 TVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS 244
Query: 170 RIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVA 228
+ +FT+ VLKA + D G+ +H+ + V N ++ Y K +V
Sbjct: 245 GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLET 304
Query: 229 RRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRT 288
R LFD+M E D VS+N +IS+Y+ ++ + F EMQ G +
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR-------------- 350
Query: 289 GNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVR 348
NF AT++ + A ++ +L++G+++H A+ +V
Sbjct: 351 -NFP------------------FATMLSIAA--NLSSLQMGRQLHCQALLATADSILHVG 389
Query: 349 NALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVE 408
N+L+ MY++C+ A ++FK +++ ++W +++SGY LF +M S +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 409 PNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKS 468
+ T A++L A A+L GK+ H +I+R E++ + LV+MYA+ G + +A
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 469 VFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGL 528
VF+ M R+ V++ +LI+ + G+G A+ F +M ++ ++PD V+++ VL+ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 529 VVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLL 588
V +G + F+ M+ IYGI P+ +H+ACM+DL GR G +A++++ +MP+ P MW+++L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 589 GACQIHRNTGIGEWAAEKLLE-TRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVR 647
AC+IH+N + E AAEKL + ++ YV ++N+YAA G W+K+ V+ MR+ G++
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 648 KIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGY 693
K+P +WV+ + F +D ++ EI + LT ++ GY
Sbjct: 689 KVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 240/502 (47%), Gaps = 46/502 (9%)
Query: 107 KNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQM 166
KN V +++ + ++A L + R + W +L+ Y R+ + EA +++QM
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 167 --QSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLF--VHNALVSMYGK 221
S D+ T+ ++L C + + + VH+ + + + F V N L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 222 FGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTI 281
++D+A LF+++ E+D+V++NT+I+ Y GL+ E+ LF++M++ G + + T
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT---- 252
Query: 282 AGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCY 341
F GVL+ V+GL LG+++H +V +
Sbjct: 253 ---------FSGVLK----------------AVVGLHD------FALGQQLHALSVTTGF 281
Query: 342 GEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFRE 401
+V N ++ YS+ + +LF E +++N ++S Y+ D E S FRE
Sbjct: 282 SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 402 MFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSG 461
M G + A++L + A +++LQ G++ HC L A + L + NSLV+MYA+
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCE 400
Query: 462 KVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLS 521
EA+ +F + +R V++T+LI+GY +G LKLF +M + ++ D T VL
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 522 ACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTS 581
A + ++ G KQ G + + +VD+Y + G + A ++ +MP +
Sbjct: 461 ASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNA 518
Query: 582 AMWATLLGACQIHRNTGIGEWA 603
W L+ A H + G GE A
Sbjct: 519 VSWNALISA---HADNGDGEAA 537
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 171/385 (44%), Gaps = 12/385 (3%)
Query: 213 NALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVE 272
N +V + GQV AR+++D+M ++ VS NTMIS + G A LF M +
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDR--- 108
Query: 273 VNVITWNTIAGGCLRTGNFKGVLELLSRM--RTQETYLDSVATVIGLGACSHVGALKLGK 330
V+TW + G R +F +L +M + T D V L C+
Sbjct: 109 -TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG 167
Query: 331 EIHGSAVRGCY--GEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTH 388
++H AV+ + + V N L+ Y + L A +LF+ EK +T+N++++GY
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 389 LDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLL 448
ES LF +M +SG +P+ T + +L + + G++ H + F+
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG-FSRDAS 286
Query: 449 LWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQ 508
+ N +++ Y++ +V E + +FD M D V+Y +I+ Y + +L F EM
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 509 IKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA-CMVDLYGRAGLLNK 567
+ +LS ++ + G++ ++ + H +VD+Y + + +
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 568 AKEIITKMPYTPTSAMWATLLGACQ 592
A+ I +P T + A + G Q
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQ 429
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 8/228 (3%)
Query: 47 FAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLE 106
+ +G + FT++R + D +FA ++ +L GKQLHA I G
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRAD--QSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 107 KNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQM 166
+N LV YA +A + E R + WN LIS + +G A+ + +M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 167 QSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWSLFVHN--ALVSMYGKFGQ 224
++ D+ + VL AC V+ G + + + + ++ + G+ G+
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 225 VDVARRLFDKM-LERDAVSWNTMISA---YASKGLWKEAFQLFVEMQE 268
A +L D+M E D + W+++++A + ++ L + A + M++
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 329 bits (844), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 205/675 (30%), Positives = 346/675 (51%), Gaps = 54/675 (8%)
Query: 65 ITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHA-CAIALGLEKNPVLVPKLVTFYASFS 123
+T+ + + F H++ C + Q +Q+HA ++ + ++ L L++ YA
Sbjct: 47 LTSNNDQSLFHYFDHLLGLCLTAQ---QCRQVHAQVLLSDFIFRSGSLAANLISVYARLG 103
Query: 124 LYNNACFLVEN------SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFT 177
L +A + E S++R WN ++ V G Y AL +Y+ M+ R + GD +
Sbjct: 104 LLLDARNVFETVSLVLLSDLRL---WNSILKANVSHGLYENALELYRGMRQRGLTGDGYI 160
Query: 178 YPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKML 236
P +L+AC + R H+ I + +L V N L+++Y K G++ A LF +M
Sbjct: 161 LPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP 220
Query: 237 ERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLE 296
R+ +SWN MI ++ + + A ++F MQ E + + +TW ++ + G F+ VL+
Sbjct: 221 VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLK 280
Query: 297 LLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYS 356
MR + A + C+ + AL + +++HG ++G + EY RNALI +Y
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 357 RCKDLRHAYILFKMTAEKSIITWNSMLSGYT---HLDCA--------------------- 392
+ ++ A LF+ K I +WNS+++ + LD A
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 393 ---------------EESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYI 437
++S FR+M S V N VTI IL +CA + L G+E H ++
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 438 LRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVA 497
+R +M +E++L+ N+LV MYA+ G + E VF+ + +D +++ S+I GYG+ G A
Sbjct: 461 IRTSM-SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKA 519
Query: 498 LKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVD 557
L +F+ M + PD + +VAVLSACSH+GLV +G++ F M+ +G+ PQ EH+AC+VD
Sbjct: 520 LSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVD 579
Query: 558 LYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGY 617
L GR G L +A EI+ MP P + LL +C++H+N I E A +L PE +G
Sbjct: 580 LLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGS 639
Query: 618 YVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEI 677
Y+L++N+Y+A G W++ A VR + ++K+ G +W++ F + + I
Sbjct: 640 YMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETI 699
Query: 678 YPLLGGLTELMKDAG 692
YP+L L M G
Sbjct: 700 YPVLEDLVSHMLKKG 714
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 336/642 (52%), Gaps = 34/642 (5%)
Query: 65 ITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAI--ALGLEKNPVLVPKLVTFYASF 122
I + + + +L+ + FC K+L KQLHA + + + N L V+ +
Sbjct: 7 IASTAANTILEKLS---FC----KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSIN 59
Query: 123 SLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAE----ALCVYKQMQSRRIRGDNFTY 178
Y F S+I P P +++ + ++RD + + Y++++ R D F++
Sbjct: 60 LSYALNVF----SSIPSP-PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSF 114
Query: 179 PSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLE 237
+LKA ++ + G +H FV + MY G+++ AR +FD+M
Sbjct: 115 LPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH 174
Query: 238 RDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFK---GV 294
RD V+WNTMI Y GL EAF+LF EM++ V + + I C RTGN + +
Sbjct: 175 RDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI 234
Query: 295 LELLSRMRTQ-ETYLDSVATVIGLGACSHVGALKLGKEI-HGSAVRGCYGEYENVRNALI 352
E L + +T+L + + GA G + + +E +VR + V A++
Sbjct: 235 YEFLIENDVRMDTHLLTALVTMYAGA----GCMDMAREFFRKMSVRNLF-----VSTAMV 285
Query: 353 TMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYV 412
+ YS+C L A ++F T +K ++ W +M+S Y D +E+ +F EM SG++P+ V
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 413 TIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDL 472
++ S++ CA + L K H I + +E L + N+L+ MYA+ G + + VF+
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESE-LSINNALINMYAKCGGLDATRDVFEK 404
Query: 473 MSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEG 532
M RR+ V+++S+I + GE AL LF M + ++P+ VT V VL CSHSGLV EG
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 533 QKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQ 592
+K F MT Y I P+LEH+ CMVDL+GRA LL +A E+I MP +W +L+ AC+
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 593 IHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGC 652
IH +G++AA+++LE P++ G VL++N+YA W+ + +R M + V K G
Sbjct: 525 IHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGL 584
Query: 653 AWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYV 694
+ +D FL+ D + Q+ EIY L + +K AGYV
Sbjct: 585 SRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYV 626
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 334/629 (53%), Gaps = 46/629 (7%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLE--KNPVLVPKLVTFYASFSLYNNACFLVE 133
SF ++ +++ + + + LG E K+ +V ++ YA ++ + +
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD 275
Query: 134 NSNIRYPLPWNLLISLYVRDGFYAEALCVY-KQMQSRRIRGDNFTYPSVLKACGEMMDVD 192
+ R WN +I +YV++ E++ ++ + + S+ I D TY A + V+
Sbjct: 276 SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335
Query: 193 FGRVVHSCIDA-CHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYA 251
GR H + E + + N+L+ MY + G V + +F M ERD VSWNTMISA+
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 252 SKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSV 311
GL E L EMQ++G +++ IT V LLS
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYIT----------------VTALLS------------ 427
Query: 312 ATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMT 371
A S++ ++GK+ H +R ++E + + LI MYS+ +R + LF+ +
Sbjct: 428 -------AASNLRNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGS 479
Query: 372 --AEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQH 429
AE+ TWNSM+SGYT E++ +FR+M + PN VT+ASILP C+++ ++
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL 539
Query: 430 GKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYG 489
GK+ H + +R+ + ++++ + ++LV+MY+++G + A+ +F R+ VTYT++I GYG
Sbjct: 540 GKQLHGFSIRQYL-DQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYG 598
Query: 490 IQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQL 549
G G A+ LF M ++ IKPD +T VAVLSACS+SGL+ EG K FE M +Y I P
Sbjct: 599 QHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSS 658
Query: 550 EHFACMVDLYGRAGLLNKAKEIITKMPYTPTSA-MWATLLGACQIHRNTGIGEWAAEKL- 607
EH+ C+ D+ GR G +N+A E + + A +W +LLG+C++H + E +E+L
Sbjct: 659 EHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLA 718
Query: 608 -LETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLV 666
+ SGY VL++NMYA W + KVR MR+ G++K G + ++ + F+
Sbjct: 719 KFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVS 778
Query: 667 DDTSNVQAQEIYPLLGGLTELMKDAGYVV 695
D + + EIY ++ GL + M+ ++
Sbjct: 779 RDQEHPHSSEIYDVIDGLAKDMRGDSFLT 807
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/601 (23%), Positives = 278/601 (46%), Gaps = 58/601 (9%)
Query: 60 FTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFY 119
++R++ TA + +++ + C + K L GK +H I + V+ L+ Y
Sbjct: 93 YSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 120 ASFSLYNNACF-------LVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIR 172
S L CF + +N + + WN LIS YV+ G AEA + M ++
Sbjct: 153 VS-CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK 211
Query: 173 GDNFTYPSVLKACGEMMDVDFGRVVHSC-IDACHEW--SLFVHNALVSMYGKFGQVDVAR 229
++ +V A + V + + E+ LFV ++ +SMY + G ++ +R
Sbjct: 212 PSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSR 271
Query: 230 RLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTG 289
R+FD +ER+ WNTMI Y E+ +LF+E
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA----------------------- 308
Query: 290 NFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRN 349
+ ++E D V ++ A S + ++LG++ HG + + N
Sbjct: 309 -----------IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 350 ALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEP 409
+L+ MYSRC + ++ +F E+ +++WN+M+S + +E L EM + G +
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 410 NYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSV 469
+Y+T+ ++L + + N + GK+ H +++R+ + E + + L++MY++SG + ++ +
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKL 475
Query: 470 FD--LMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSG 527
F+ + RD+ T+ S+I+GY G +F +M + I+P+ VT+ ++L ACS G
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 528 LVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATL 587
V G KQ + + + + +VD+Y +AG + A+++ ++ + +
Sbjct: 536 SVDLG-KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMI 594
Query: 588 LGACQIHRNTGIGEWAAEKLLETRPE----NSGYYVLIANMYAATGCWDKLAKVRTCMRD 643
LG Q G+GE A L + ++ +V + + + +G D+ K+ MR+
Sbjct: 595 LGYGQ----HGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 644 L 644
+
Sbjct: 651 V 651
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 225/504 (44%), Gaps = 91/504 (18%)
Query: 143 WNLLISLYVRDGFYAEALCVYKQMQSRR--IRGDNFTYPSVLKACGEMMDVDFGRVVHSC 200
WN +I ++ + EAL Y +M+ D +TY S LKAC E ++ G+ VH
Sbjct: 73 WNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCH 132
Query: 201 IDAC-HEWSLFVHNALVSMY------GKFGQVDVARRLFDKMLERDAVSWNTMISAYASK 253
+ C S VHN+L++MY + DV R++FD M ++ V+WNT+IS Y
Sbjct: 133 LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 254 GLWKEAFQLFVEMQEEGVE------VNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETY 307
G EA + F M V+ VNV +I+ + F G++
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLM------------ 240
Query: 308 LDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYIL 367
LKLG E V+ + V ++ I+MY+ D+ + +
Sbjct: 241 ------------------LKLGDEY----VKDLF-----VVSSAISMYAELGDIESSRRV 273
Query: 368 FKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRS----GVEPNYVTIASILPLCAR 423
F E++I WN+M+ Y DC ES LF E S E Y+ AS + +
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 424 VANLQHGKEFHCYILRRAMFNE-HLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYT 482
V + G++FH ++ + F E +++ NSL+ MY+R G V ++ VF M RD V++
Sbjct: 334 V---ELGRQFHGFVSKN--FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWN 388
Query: 483 SLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACS-----------HSGLVVE 531
++I+ + G L L EM K K D++T+ A+LSA S H+ L+ +
Sbjct: 389 TMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ 448
Query: 532 GQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTP-TSAMWATLLGA 590
G QFE M S ++D+Y ++GL+ ++++ Y A W +++
Sbjct: 449 G-IQFEGMNSY------------LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 591 CQIHRNTGIGEWAAEKLLET--RP 612
+ +T K+LE RP
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRP 519
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 159/377 (42%), Gaps = 45/377 (11%)
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
G +AR+LFD + + V WNT+I + L EA + M+
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK--------------- 97
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYG 342
+T F T D+ L AC+ LK GK +H +R
Sbjct: 98 ----KTAPF--------------TNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQN 139
Query: 343 EYENVRNALITMYSRCKDLRHAY------ILFKMTAEKSIITWNSMLSGYTHLDCAEESA 396
V N+L+ MY C + + +F K+++ WN+++S Y E+
Sbjct: 140 SSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEAC 199
Query: 397 FLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRA-MFNEHLLLWNSLVE 455
F M R V+P+ V+ ++ P + +++ F+ +L+ + + L + +S +
Sbjct: 200 RQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAIS 259
Query: 456 MYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRV-ALKLF-EEMNKNQIKPDH 513
MYA G + ++ VFD R+ + ++I Y +Q + V +++LF E + +I D
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVY-VQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 514 VTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIIT 573
VT + SA S V G++ ++ + P + + MV +Y R G ++K+ +
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFL 377
Query: 574 KMPYTPTSAMWATLLGA 590
M + W T++ A
Sbjct: 378 SMRERDVVS-WNTMISA 393
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/618 (32%), Positives = 322/618 (52%), Gaps = 47/618 (7%)
Query: 80 IIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRY 139
+F K ++ Q +Q+ A + +EK L+PK V +N + FL +
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAV----ELGDFNYSSFLFSVTEEPN 95
Query: 140 PLPWNLLI-SLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH 198
+N +I L + AL +Y++M+ ++ D FTY V AC ++ ++ GR VH
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 199 SCI-DACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWK 257
S + E + ++++L+ MY K GQV AR+LFD++ ERD VSWN+MIS Y+ G K
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 258 EAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGL 317
+A LF +M+EEG E + T ++ G
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLG---------------------------------- 241
Query: 318 GACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSII 377
ACSH+G L+ G+ + A+ G + + LI+MY +C DL A +F +K +
Sbjct: 242 -ACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV 300
Query: 378 TWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYI 437
W +M++ Y+ + E+ LF EM ++GV P+ T++++L C V L+ GK+ +
Sbjct: 301 AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHA 360
Query: 438 LRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVA 497
++ ++ + LV+MY + G+V EA VF+ M ++E T+ ++I Y QG + A
Sbjct: 361 SELSL-QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEA 419
Query: 498 LKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVD 557
L LF+ M+ + P +T + VLSAC H+GLV +G + F M+S++G+ P++EH+ ++D
Sbjct: 420 LLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIID 476
Query: 558 LYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETR-PENSG 616
L RAG+L++A E + + P P M A +LGAC ++ I E A L+E + +N+G
Sbjct: 477 LLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAG 536
Query: 617 YYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLV-DDTSNVQAQ 675
YV+ +N+ A WD+ AK+R MRD GV K PGC+W++ FL D +
Sbjct: 537 NYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGRE 596
Query: 676 EIYPLLGGLTELMKDAGY 693
+ L L E MK Y
Sbjct: 597 DSGSLFDLLVEEMKRERY 614
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 206/469 (43%), Gaps = 75/469 (15%)
Query: 56 AFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKL 115
A + R++ + D +F I C K++ + G+ +H+ +GLE++ + L
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFI--ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 116 VTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDN 175
+ YA A L + R + WN +IS Y G+ +A+ ++++M+ D
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 176 FTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDK 234
T S+L AC + D+ GR++ I S F+ + L+SMYGK G +D ARR+F++
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 235 MLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGV 294
M+++D V+W MI+ Y+ G EAF+LF EM++ GV + T +T+
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTV------------- 340
Query: 295 LELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITM 354
L AC VGAL+LGK+I A V L+ M
Sbjct: 341 ----------------------LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDM 378
Query: 355 YSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTI 414
Y +C + A +F+ K+ TWN+M++ Y H A+E+ LF M V P+ +T
Sbjct: 379 YGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITF 435
Query: 415 ASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS 474
+L C + G + ++ + M+ K+ ++ DL+S
Sbjct: 436 IGVLSACVHAGLVHQGCRY----------------FHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 475 RRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSAC 523
R G+ E +E M + KPD + + A+L AC
Sbjct: 480 RA------------GMLDEA------WEFMERFPGKPDEIMLAAILGAC 510
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 197/653 (30%), Positives = 333/653 (50%), Gaps = 62/653 (9%)
Query: 77 FAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSN 136
+A ++ C + L G QLHA A+ + ++ + YA +A L +NS
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 137 IRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRV 196
+N +I+ Y ++ +AL ++ ++ S + D + V +AC + + G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 197 VHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGL 255
++ I + + V NA + MYGK + A R+FD+M RDAVSWN +I+A+ G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 256 WKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVI 315
E LFV M +E + T+ +I C TG
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKAC--TG-------------------------- 495
Query: 316 GLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKS 375
G+L G EIH S V+ +V +LI MYS+C + A + +++
Sbjct: 496 --------GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 547
Query: 376 --------------------IITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIA 415
++WNS++SGY + +E++ LF M G+ P+ T A
Sbjct: 548 NVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 416 SILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSR 475
++L CA +A+ GK+ H ++++ + ++ + + ++LV+MY++ G + +++ +F+ R
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSD-VYICSTLVDMYSKCGDLHDSRLMFEKSLR 666
Query: 476 RDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQ 535
RD VT+ ++I GY G+G A++LFE M IKP+HVT +++L AC+H GL+ +G +
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 726
Query: 536 FERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHR 595
F M YG+ PQL H++ MVD+ G++G + +A E+I +MP+ +W TLLG C IHR
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 786
Query: 596 NT-GIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAW 654
N + E A LL P++S Y L++N+YA G W+K++ +R MR ++K PGC+W
Sbjct: 787 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 846
Query: 655 VDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMK---DAGYVVKEEFCSEEE 704
V+ + FLV D ++ + +EIY LG + MK D+ +V E E++
Sbjct: 847 VELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 246/548 (44%), Gaps = 92/548 (16%)
Query: 70 HDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNAC 129
+ V +F+ + C K AL GKQ HA I G ++ L+ Y + + +A
Sbjct: 44 NSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103
Query: 130 FLVE------------------NSN-------------IRYPLPWNLLISLYVRDGFYAE 158
+ + SN +R + WN ++S Y+++G +
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 159 ALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI--DACHEWSLFVHNALV 216
++ V+ M I D T+ +LK C + D G +H + C + + +AL+
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALL 222
Query: 217 SMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVI 276
MY K + + R+F + E+++VSW+ +I+ L A + F EMQ +VN
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ----KVNAG 278
Query: 277 TWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSA 336
+I LR+ C+ + L+LG ++H A
Sbjct: 279 VSQSIYASVLRS-------------------------------CAALSELRLGGQLHAHA 307
Query: 337 VRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESA 396
++ + VR A + MY++C +++ A ILF + + ++N+M++GY+ + ++
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 397 FLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEM 456
LF + SG+ + ++++ + CA V L G + + ++ ++ + + + N+ ++M
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL-SLDVCVANAAIDM 426
Query: 457 YARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTM 516
Y + + EA VFD M RRD V++ ++IA + G+G L LF M +++I+PD T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 517 VAVLSACS----------HSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLN 566
++L AC+ HS +V G M S + L +D+Y + G++
Sbjct: 487 GSILKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCSL------IDMYSKCGMIE 534
Query: 567 KAKEIITK 574
+A++I ++
Sbjct: 535 EAEKIHSR 542
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 210/458 (45%), Gaps = 20/458 (4%)
Query: 31 NNEHIMRINLLETLKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKAL 90
N+E++ R + + ++ + KA F R+ + D + S + + C VK L
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI--SLSGVFRACALVKGL 398
Query: 91 AQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLY 150
++G Q++ AI L + + + Y A + + R + WN +I+ +
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 151 VRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DACHEWSL 209
++G E L ++ M RI D FT+ S+LKAC + +G +HS I + +
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNS 517
Query: 210 FVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEE 269
V +L+ MY K G ++ A ++ + +R VS G +E +M +
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEE----LEKMHNK 562
Query: 270 GVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLG 329
++ ++WN+I G + + L +RM D L C+++ + LG
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 622
Query: 330 KEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHL 389
K+IH ++ + + L+ MYS+C DL + ++F+ + + +TWN+M+ GY H
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 390 DCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLL 449
EE+ LF M ++PN+VT SIL CA + + G E+ + R + L
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 450 WNSLVEMYARSGKVPEAKSVFDLMS-RRDEVTYTSLIA 486
++++V++ +SGKV A + M D+V + +L+
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 248/597 (41%), Gaps = 68/597 (11%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+FA I+ C ++ + G Q+H + +G + + V L+ YA + + + +
Sbjct: 182 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
+ + W+ +I+ V++ + AL +K+MQ Y SVL++C + ++ G
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 196 VVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKG 254
+H+ + + V A + MY K + A+ LFD + S+N MI+ Y+
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS--- 358
Query: 255 LWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATV 314
QEE FK +L L R+ + D ++
Sbjct: 359 ------------QEE-------------------HGFKALL-LFHRLMSSGLGFDEISLS 386
Query: 315 IGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEK 374
AC+ V L G +I+G A++ V NA I MY +C+ L A+ +F +
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 446
Query: 375 SIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFH 434
++WN++++ + E+ FLF M RS +EP+ T SIL C +L +G E H
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIH 505
Query: 435 CYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDE---------------- 478
I++ M + + SL++MY++ G + EA+ + +R
Sbjct: 506 SSIVKSGMASNS-SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 479 ----VTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQK 534
V++ S+I+GY ++ + A LF M + I PD T VL C++ G K
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG-K 623
Query: 535 QFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIH 594
Q + + + +VD+Y + G L+ ++ + K W ++ H
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHH 682
Query: 595 RNTGIGEWAAE----KLLETRPENSGYYVLIANMYAATGCWDK-LAKVRTCMRDLGV 646
G GE A + +LE N ++ I A G DK L RD G+
Sbjct: 683 ---GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGL 736
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 204/442 (46%), Gaps = 27/442 (6%)
Query: 167 QSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQV 225
Q + NF++ V K C + ++ G+ H+ I + + FV N L+ +Y
Sbjct: 42 QVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 226 DVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGC 285
A +FDKM RD VSWN MI+ Y+ +A F M +V++WN++ G
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVR----DVVSWNSMLSGY 155
Query: 286 LRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVR-GCYGEY 344
L+ G +E+ M + D I L CS + LG +IHG VR GC +
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 345 ENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFR 404
+AL+ MY++ K + +F+ EK+ ++W+++++G + + F+EM +
Sbjct: 216 V-AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK 274
Query: 405 SGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP 464
+ AS+L CA ++ L+ G + H + L ++ F ++ + ++MYA+ +
Sbjct: 275 VNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL-KSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 465 EAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACS 524
+A+ +FD + +Y ++I GY + G AL LF + + + D +++ V AC+
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 525 HSGLVVEGQKQFERMTSIYG--IFPQLEHFACM----VDLYGRAGLLNKAKEIITKMPYT 578
+ EG + IYG I L C+ +D+YG+ L +A + +M
Sbjct: 394 LVKGLSEGLQ-------IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 446
Query: 579 PTSAMWATLLGACQIHRNTGIG 600
+ W ++ A H G G
Sbjct: 447 DAVS-WNAIIAA---HEQNGKG 464
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/652 (29%), Positives = 327/652 (50%), Gaps = 53/652 (8%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
+K F G +A + ++R+ D ++ +I + +L +GK++HA I L
Sbjct: 102 IKGFTSCGLYIEAVQFYSRMVFAGVKADTF--TYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
G + + L++ Y +A + E R + WN +IS Y+ G +L ++
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACH-------EWSLFVHNALV 216
K+M + D F+ S L AC + G+ +H CH + V +++
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH-----CHAVRSRIETGDVMVMTSIL 274
Query: 217 SMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVI 276
MY K+G+V A R+F+ M++R N++
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQR-----------------------------------NIV 299
Query: 277 TWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSA 336
WN + G R G +M Q V T I L S A+ G+ IHG A
Sbjct: 300 AWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS---AILEGRTIHGYA 356
Query: 337 VRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESA 396
+R + + + ALI MY C L+ A ++F AEK++I+WNS+++ Y +
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 397 FLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEM 456
LF+E++ S + P+ TIASILP A +L G+E H YI++ ++ ++L NSLV M
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL-NSLVHM 475
Query: 457 YARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTM 516
YA G + +A+ F+ + +D V++ S+I Y + G GR+++ LF EM +++ P+ T
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 517 VAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMP 576
++L+ACS SG+V EG + FE M YGI P +EH+ CM+DL GR G + AK + +MP
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 577 YTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAK 636
+ PT+ +W +LL A + H++ I E+AAE++ + +N+G YVL+ NMYA G W+ + +
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 637 VRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELM 688
++ M G+ + + V+A F D S+V +IY +L ++ ++
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMV 707
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 258/526 (49%), Gaps = 60/526 (11%)
Query: 108 NPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQ 167
+P L L F A L +A L + N WN++I + G Y EA+ Y +M
Sbjct: 64 DPALTRALRGF-ADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 168 SRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVD 226
++ D FTYP V+K+ + ++ G+ +H+ I ++V N+L+S+Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 227 VARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCL 286
A ++F++M ERD VSWN+MIS Y + G + LF EM + G
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG---------------- 226
Query: 287 RTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYE- 345
FK D +T+ LGACSHV + K+GKEIH AVR +
Sbjct: 227 ----FKP---------------DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 346 NVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMF-R 404
V +++ MYS+ ++ +A +F +++I+ WN M+ Y ++ F++M +
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 405 SGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP 464
+G++P+ +T ++LP A + G+ H Y +RR F H++L +L++MY G++
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRG-FLPHMVLETALIDMYGECGQLK 382
Query: 465 EAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACS 524
A+ +FD M+ ++ +++ S+IA Y G+ AL+LF+E+ + + PD T+ ++L A +
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 525 HSGLVVEGQKQFERMTSIYGIFPQLEHFA------CMVDLYGRAGLLNKAKEIITKMPYT 578
S + EG++ I+ + +++ +V +Y G L A++ +
Sbjct: 443 ESLSLSEGRE-------IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 579 PTSAMWATLLGACQIHRNTGIGEWAAEKLLETR--PENSGYYVLIA 622
+ W +++ A +H I W +++ +R P S + L+A
Sbjct: 496 DVVS-WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 333/630 (52%), Gaps = 63/630 (10%)
Query: 71 DVVLDSF--AHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFY-------AS 121
+VV D + + ++ C + L GKQ+HA + GLE + L+ L+ Y A+
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 122 FSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSV 181
L+N + N NI + W L+S Y ++ + EA+ ++ M ++ D + S+
Sbjct: 304 HKLFNG----MPNKNI---ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 182 LKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDA 240
L +C + + FG VH+ I A +V N+L+ MY K + AR++FD D
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 241 VSWNTMISAYASKGL-WK--EAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLEL 297
V +N MI Y+ G W+ EA +F +M+ + +++T+ ++
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL---------------- 460
Query: 298 LSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENV--RNALITMY 355
L A + + +L L K+IHG + YG ++ +ALI +Y
Sbjct: 461 -------------------LRASASLTSLGLSKQIHGLMFK--YGLNLDIFAGSALIDVY 499
Query: 356 SRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIA 415
S C L+ + ++F K ++ WNSM +GY EE+ LF E+ S P+ T A
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 416 SILPLCARVANLQHGKEFHCYILRRAM-FNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS 474
+++ +A++Q G+EFHC +L+R + N ++ N+L++MYA+ G +A FD +
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT--NALLDMYAKCGSPEDAHKAFDSAA 617
Query: 475 RRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQK 534
RD V + S+I+ Y GEG+ AL++ E+M I+P+++T V VLSACSH+GLV +G K
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 535 QFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIH 594
QFE M +GI P+ EH+ CMV L GRAG LNKA+E+I KMP P + +W +LL C
Sbjct: 678 QFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKA 736
Query: 595 RNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAW 654
N + E AAE + + P++SG + +++N+YA+ G W + KVR M+ GV K PG +W
Sbjct: 737 GNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSW 796
Query: 655 VDAGNVFSPFLVDDTSNVQAQEIYPLLGGL 684
+ FL D S+ +A +IY +L L
Sbjct: 797 IGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 237/546 (43%), Gaps = 57/546 (10%)
Query: 96 LHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGF 155
+H I GLE + L L+ Y+ A + E R + W+ ++S G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 156 YAEALCVYKQM-QSRRIRGDNFTYPSVLKAC------GEMMDVDFGRVVHSCIDACHEWS 208
Y E+L V+ + ++R+ + + S ++AC G M + + + +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFL---VKSGFDRD 182
Query: 209 LFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQE 268
++V L+ Y K G +D AR +FD + E+ V
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV--------------------------- 215
Query: 269 EGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKL 328
TW T+ GC++ G L+L ++ D L ACS + L+
Sbjct: 216 --------TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 329 GKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTH 388
GK+IH +R ++ N LI Y +C + A+ LF K+II+W ++LSGY
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 389 LDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLL 448
+E+ LF M + G++P+ +SIL CA + L G + H Y ++ + N+ +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 449 LWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGY---GIQGEGRVALKLFEEMN 505
NSL++MYA+ + +A+ VFD+ + D V + ++I GY G Q E AL +F +M
Sbjct: 388 T-NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 506 KNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLL 565
I+P +T V++L A S S + KQ + YG+ + + ++D+Y L
Sbjct: 447 FRLIRPSLLTFVSLLRA-SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 566 NKAKEIITKMPYTPTSAMWATLL-GACQIHRN-TGIGEWAAEKLLETRPENSGYYVLIAN 623
++ + +M +W ++ G Q N + + +L RP+ + AN
Sbjct: 506 KDSRLVFDEMKVKDL-VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF----AN 560
Query: 624 MYAATG 629
M A G
Sbjct: 561 MVTAAG 566
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 317/620 (51%), Gaps = 41/620 (6%)
Query: 84 CGKVKALAQGKQLHACAIALG-LEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLP 142
C + K G+Q+H + G L+ +P LV YA L A + S R
Sbjct: 70 CAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFG 128
Query: 143 WNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID 202
+N LIS +V +G +A+ Y++M++ I D +T+PS+LK M D +V
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFK 188
Query: 203 ACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERD-AVSWNTMISAYASKGLWKEAFQ 261
+ +V + LV+ Y KF V+ A+++FD++ +RD +V WN +++ Y+ Q
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS---------Q 239
Query: 262 LFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACS 321
+F F+ L + S+MR + + L A +
Sbjct: 240 IF--------------------------RFEDALLVFSKMREEGVGVSRHTITSVLSAFT 273
Query: 322 HVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNS 381
G + G+ IHG AV+ G V NALI MY + K L A +F+ E+ + TWNS
Sbjct: 274 VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNS 333
Query: 382 MLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRA 441
+L + + + + LF M SG+ P+ VT+ ++LP C R+A+L+ G+E H Y++
Sbjct: 334 VLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSG 393
Query: 442 MFNE---HLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVAL 498
+ N + + NSL++MY + G + +A+ VFD M +D ++ +I GYG+Q G +AL
Sbjct: 394 LLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELAL 453
Query: 499 KLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDL 558
+F M + +KPD +T V +L ACSHSG + EG+ +M ++Y I P +H+AC++D+
Sbjct: 454 DMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDM 513
Query: 559 YGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYY 618
GRA L +A E+ P +W ++L +C++H N + A ++L E PE+ G Y
Sbjct: 514 LGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGY 573
Query: 619 VLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIY 678
VL++N+Y G ++++ VR MR V+K PGC+W+ N F + ++ + + I+
Sbjct: 574 VLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Query: 679 PLLGGLTELMKDAGYVVKEE 698
L + M Y+ ++
Sbjct: 634 DWLSLVISHMHGHEYMTVDD 653
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 7/269 (2%)
Query: 310 SVATVIG-LGACSHVGALKLGKEIHGSAVR-GCYGEYENVRNALITMYSRCKDLRHAYIL 367
+VAT I L C+ G++IHG VR G + +L+ MY++C +R A ++
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 368 FKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANL 427
F +E+ + +N+++SG+ ++ +REM +G+ P+ T S+L + L
Sbjct: 119 FG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMEL 176
Query: 428 QHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFD-LMSRRDEVTYTSLIA 486
K+ H + F+ + + LV Y++ V +A+ VFD L R D V + +L+
Sbjct: 177 SDVKKVHGLAFKLG-FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 487 GYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIF 546
GY AL +F +M + + T+ +VLSA + SG + G + + G
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG-RSIHGLAVKTGSG 294
Query: 547 PQLEHFACMVDLYGRAGLLNKAKEIITKM 575
+ ++D+YG++ L +A I M
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 410 NYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSV 469
N T + L CA+ + G++ H +++R+ ++ SLV MYA+ G + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 470 FDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLV 529
F S RD Y +LI+G+ + G A++ + EM N I PD T ++L +
Sbjct: 119 FG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS--DAME 175
Query: 530 VEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLL- 588
+ K+ + G + +V Y + + A+++ ++P S +W L+
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 589 GACQIHR 595
G QI R
Sbjct: 236 GYSQIFR 242
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 115/269 (42%), Gaps = 26/269 (9%)
Query: 51 GNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGL----E 106
G+ F R+ + D+V + ++ CG++ +L QG+++H I GL
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIV--TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKS 399
Query: 107 KNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQM 166
N + L+ Y +A + ++ ++ WN++I+ Y AL ++ M
Sbjct: 400 SNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM 459
Query: 167 QSRRIRGDNFTYPSVLKACGEMMDVDFGR-------VVHSCIDACHEWSLFVHNALVSMY 219
++ D T+ +L+AC ++ GR V++ + ++ ++ M
Sbjct: 460 CRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA-----CVIDML 514
Query: 220 GKFGQVDVARRL-FDKMLERDAVSWNTMISA---YASKGLWKEAFQLFVEMQEEGVEVNV 275
G+ +++ A L K + + V W +++S+ + +K L A + E++ E V
Sbjct: 515 GRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYV 574
Query: 276 ITWNTIAGGCLRTGNFKGVLELLSRMRTQ 304
+ N + G ++ VL++ MR Q
Sbjct: 575 LMSNVY----VEAGKYEEVLDVRDAMRQQ 599
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 309/604 (51%), Gaps = 39/604 (6%)
Query: 91 AQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLY 150
+G Q+H + GL+K + L+ Y A L + + ++ + WN +IS Y
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 151 VRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWSLF 210
+G EAL ++ M+ +R ++ SV+K C + ++ F +H
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS---------- 320
Query: 211 VHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEG 270
V YG LFD+ + ++ AY+ +A +LF E+ G
Sbjct: 321 -----VVKYG---------FLFDQNIR------TALMVAYSKCTAMLDALRLFKEI---G 357
Query: 271 VEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGK 330
NV++W + G L+ + ++L S M+ + + + L A +
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----S 413
Query: 331 EIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLD 390
E+H V+ Y V AL+ Y + + A +F +K I+ W++ML+GY
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 391 CAEESAFLFREMFRSGVEPNYVTIASILPLCARV-ANLQHGKEFHCYILRRAMFNEHLLL 449
E + +F E+ + G++PN T +SIL +CA A++ GK+FH + ++ + + L +
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCV 532
Query: 450 WNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQI 509
++L+ MYA+ G + A+ VF +D V++ S+I+GY G+ AL +F+EM K ++
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 510 KPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAK 569
K D VT + V +AC+H+GLV EG+K F+ M I P EH +CMVDLY RAG L KA
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 570 EIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATG 629
++I MP S +W T+L AC++H+ T +G AAEK++ +PE+S YVL++NMYA +G
Sbjct: 653 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 712
Query: 630 CWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMK 689
W + AKVR M + V+K PG +W++ N FL D S+ +IY L L+ +K
Sbjct: 713 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Query: 690 DAGY 693
D GY
Sbjct: 773 DLGY 776
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 237/488 (48%), Gaps = 50/488 (10%)
Query: 93 GKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVR 152
G+QLH I G + + LV Y S + + + + R + W LIS Y R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 153 DGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFV 211
+ E L ++ +MQ+ + ++FT+ + L E G VH+ + + ++ V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 212 HNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGV 271
N+L+++Y K G V AR LFDK + V+WN+MIS YA+ GL EA +F M+
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR---- 287
Query: 272 EVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKE 331
L+ +R E+ S A+VI L C+++ L+ ++
Sbjct: 288 --------------------------LNYVRLSES---SFASVIKL--CANLKELRFTEQ 316
Query: 332 IHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFK-MTAEKSIITWNSMLSGYTHLD 390
+H S V+ + +N+R AL+ YS+C + A LFK + ++++W +M+SG+ D
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 391 CAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLW 450
EE+ LF EM R GV PN T + IL ++ E H ++ + + +
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVV-KTNYERSSTVG 431
Query: 451 NSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIK 510
+L++ Y + GKV EA VF + +D V +++++AGY GE A+K+F E+ K IK
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 511 PDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFAC----MVDLYGRAGLLN 566
P+ T ++L+ C+ + + KQF + I +L+ C ++ +Y + G +
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHG----FAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 567 KAKEIITK 574
A+E+ +
Sbjct: 548 SAEEVFKR 555
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 227/511 (44%), Gaps = 81/511 (15%)
Query: 113 PKLVTFYASFSLYNNA-------CF-------------LVENSNIRYPLPWNLLISLYVR 152
P L F F +Y N CF L + S R + L+ + R
Sbjct: 11 PSLENFKPKFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSR 70
Query: 153 DGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH-SCIDACHEWSLFV 211
DG EA ++ + + D + SVLK + D FGR +H CI
Sbjct: 71 DGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI---------- 120
Query: 212 HNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGV 271
KFG +D D +++ Y +K+ ++F EM+E
Sbjct: 121 ---------KFGFLD------------DVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-- 157
Query: 272 EVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKE 331
NV+TW T+ G R VL L RM+ + T +S LG + G G +
Sbjct: 158 --NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 332 IHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDC 391
+H V+ + V N+LI +Y +C ++R A ILF T KS++TWNSM+SGY
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 392 AEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRA-MFNEHLLLW 450
E+ +F M + V + + AS++ LCA + L+ ++ HC +++ +F++++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR-- 333
Query: 451 NSLVEMYARSGKVPEAKSVF-DLMSRRDEVTYTSLIAGYGIQGEGR-VALKLFEEMNKNQ 508
+L+ Y++ + +A +F ++ + V++T++I+G+ +Q +G+ A+ LF EM +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF-LQNDGKEEAVDLFSEMKRKG 392
Query: 509 IKPDHVTMVAVLSACS-------HSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGR 561
++P+ T +L+A H+ +V + +ER +++ ++D Y +
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVV---KTNYERSSTVG---------TALLDAYVK 440
Query: 562 AGLLNKAKEIITKMPYTPTSAMWATLLGACQ 592
G + +A ++ + + A A L G Q
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 195/404 (48%), Gaps = 48/404 (11%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLV-EN 134
SFA +I C +K L +QLH + G + + L+ Y+ + +A L E
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFG 194
+ + W +IS ++++ EA+ ++ +M+ + +R + FTY +L A + V
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISP 412
Query: 195 RVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASK 253
VH+ + +E S V AL+ Y K G+V+ A ++F + ++D V+W+ M++ YA
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 254 GLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVAT 313
G + A ++F E+ + G++ N T+++I C T
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN------------------------ 508
Query: 314 VIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAE 373
++ GK+ HG A++ V +AL+TMY++ ++ A +FK E
Sbjct: 509 ----------ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 374 KSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEF 433
K +++WNSM+SGY A ++ +F+EM + V+ + VT + C ++ G+++
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 434 HCYILRR---AMFNEHLLLWNS-LVEMYARSGKVPEAKSVFDLM 473
++R A EH NS +V++Y+R+G++ +A V + M
Sbjct: 619 FDIMVRDCKIAPTKEH----NSCMVDLYSRAGQLEKAMKVIENM 658
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 76 SFAHIIFCCGKVKA-LAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVEN 134
+F+ I+ C A + QGKQ H AI L+ + + L+T YA +A + +
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFG 194
+ + WN +IS Y + G +AL V+K+M+ R+++ D T+ V AC V+ G
Sbjct: 556 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Query: 195 -RVVHSCIDACHEWSLFVHNA-LVSMYGKFGQVDVARRLFDKMLERDAVS-WNTMISA-- 249
+ + C HN+ +V +Y + GQ++ A ++ + M + W T+++A
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 675
Query: 250 -YASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
+ L + A + + M+ E V+ N A
Sbjct: 676 VHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYA 709
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 321/626 (51%), Gaps = 40/626 (6%)
Query: 72 VVLDSF--AHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNAC 129
+V DSF + ++ G + + QG+ LH A+ G+ V+ LV Y F +A
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 130 FLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMM 189
+ + ++R + +N +I Y++ E++ ++ + + + D T SVL+ACG +
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 190 DVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMIS 248
D+ + +++ + A V N L+ +Y K G + AR +F+ M +D VS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS------ 375
Query: 249 AYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYL 308
WN+I G +++G+ ++L M E
Sbjct: 376 -----------------------------WNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 309 DSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILF 368
D + ++ + + + LK GK +H + ++ +V NALI MY++C ++ + +F
Sbjct: 407 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 466
Query: 369 KMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQ 428
+TWN+++S + +M +S V P+ T LP+CA +A +
Sbjct: 467 SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 526
Query: 429 HGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGY 488
GKE HC +LR + L + N+L+EMY++ G + + VF+ MSRRD VT+T +I Y
Sbjct: 527 LGKEIHCCLLRFG-YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585
Query: 489 GIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQ 548
G+ GEG AL+ F +M K+ I PD V +A++ ACSHSGLV EG FE+M + Y I P
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645
Query: 549 LEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLL 608
+EH+AC+VDL R+ ++KA+E I MP P +++WA++L AC+ + E + +++
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705
Query: 609 ETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDD 668
E P++ GY +L +N YAA WDK++ +R ++D + K PG +W++ G F D
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGD 765
Query: 669 TSNVQAQEIYPLLGGLTELMKDAGYV 694
S Q++ IY L L LM GY+
Sbjct: 766 DSAPQSEAIYKSLEILYSLMAKEGYI 791
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 255/511 (49%), Gaps = 55/511 (10%)
Query: 90 LAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVEN-SNIRYPLPWNLLIS 148
L + +++HA I+LGL+ + KL+ Y+ F ++ + S + WN +I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79
Query: 149 LYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DACHEW 207
+ ++G + EAL Y +++ ++ D +T+PSV+KAC + D + G +V+ I D E
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 208 SLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQ 267
LFV NALV MY + G + AR++FD+M RD VSWN++IS Y+S G ++EA +++ E++
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 268 EEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALK 327
+ + T +++ L A ++ +K
Sbjct: 200 NSWIVPDSFTVSSV-----------------------------------LPAFGNLLVVK 224
Query: 328 LGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYT 387
G+ +HG A++ V N L+ MY + + A +F + +++N+M+ GY
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 388 HLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHL 447
L+ EES +F E +P+ +T++S+L C + +L K + Y+L +A F
Sbjct: 285 KLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML-KAGFVLES 342
Query: 448 LLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKN 507
+ N L+++YA+ G + A+ VF+ M +D V++ S+I+GY G+ A+KLF+ M
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 508 QIKPDHVTMVAVLSACSH-------SGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYG 560
+ + DH+T + ++S + GL G K GI L ++D+Y
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS--------GICIDLSVSNALIDMYA 454
Query: 561 RAGLLNKAKEIITKMPYTPTSAMWATLLGAC 591
+ G + + +I + M T + W T++ AC
Sbjct: 455 KCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 278/590 (47%), Gaps = 51/590 (8%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
++ F+ G +A E + ++R + S D +F +I C + G ++ + +
Sbjct: 78 IRAFSKNGLFPEALEFYGKLRESKVSPDKY--TFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
G E + + LV Y+ L A + + +R + WN LIS Y G+Y EAL +Y
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKF 222
++++ I D+FT SVL A G ++ V G+ +H + + + V+N LV+MY KF
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
+ ARR+FD+M RD+VS+NTMI Y L +EM EE V +
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGY-----------LKLEMVEESVRM--------- 295
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYG 342
LE L + + + SV L AC H+ L L K I+ ++ +
Sbjct: 296 -----------FLENLDQFKPDLLTVSSV-----LRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 343 EYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREM 402
VRN LI +Y++C D+ A +F K ++WNS++SGY E+ LF+ M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 403 FRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGK 462
+ +++T ++ + R+A+L+ GK H ++ + + L + N+L++MYA+ G+
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID-LSVSNALIDMYAKCGE 458
Query: 463 VPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSA 522
V ++ +F M D VT+ ++I+ G+ L++ +M K+++ PD T + L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 523 CSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSA 582
C+ G K+ +G +L+ ++++Y + G L + + +M
Sbjct: 519 CASLAAKRLG-KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV-V 576
Query: 583 MWATLLGACQIHRNTGIGEWAAEKLLETRPENSGY----YVLIANMYAAT 628
W ++ A ++ G GE A E + E SG V IA +YA +
Sbjct: 577 TWTGMIYAYGMY---GEGEKALETFADM--EKSGIVPDSVVFIAIIYACS 621
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 196/429 (45%), Gaps = 46/429 (10%)
Query: 166 MQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQ 224
MQ+R + P + +A +++ R +H+ I + S F L+ Y F +
Sbjct: 1 MQTR------VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFRE 54
Query: 225 VDVARRLFDKMLE-RDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAG 283
+ +F ++ ++ WN++I A++ GL+ EA + + +++E V + T+ ++
Sbjct: 55 PASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 284 GCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGE 343
C G F + L E LD +G + VG
Sbjct: 115 AC--AGLFDAEMGDL----VYEQILD-----MGFESDLFVG------------------- 144
Query: 344 YENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMF 403
NAL+ MYSR L A +F + +++WNS++SGY+ EE+ ++ E+
Sbjct: 145 -----NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 404 RSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKV 463
S + P+ T++S+LP + ++ G+ H + L+ + + ++ N LV MY + +
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN-NGLVAMYLKFRRP 258
Query: 464 PEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSAC 523
+A+ VFD M RD V+Y ++I GY ++++F E N +Q KPD +T+ +VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRAC 317
Query: 524 SHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAM 583
H + + + M G + ++D+Y + G + A+++ M T +
Sbjct: 318 GHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 584 WATLLGACQ 592
+ + G Q
Sbjct: 377 NSIISGYIQ 385
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 98/243 (40%), Gaps = 16/243 (6%)
Query: 51 GNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPV 110
G+ + + T++R + D+ +F + C + A GK++H C + G E
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMA--TFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 111 LVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRR 170
+ L+ Y+ N+ + E + R + W +I Y G +AL + M+
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 171 IRGDNFTYPSVLKACGEMMDVDFGRV------VHSCIDACHEWSLFVHNALVSMYGKFGQ 224
I D+ + +++ AC VD G H ID E + +V + + +
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH----YACVVDLLSRSQK 661
Query: 225 VDVARRLFDKM-LERDAVSWNTMISAYASKGLWKEAFQL---FVEMQEEGVEVNVITWNT 280
+ A M ++ DA W +++ A + G + A ++ +E+ + +++ N
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 281 IAG 283
A
Sbjct: 722 YAA 724
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 289/554 (52%), Gaps = 39/554 (7%)
Query: 144 NLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDV-DFGRVVHSCID 202
N LI ++G +A+ V Q S TY ++ CG + D RV +D
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 203 ACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQL 262
+ F+ L+ MY G VD AR++FDK +R WN + A G +E L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 263 FVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSH 322
+ +M GVE + T+ + C+ + C+
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVAS------------------------------ECT- 194
Query: 323 VGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSM 382
V L GKEIH R Y + + L+ MY+R + +A +F +++++W++M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 383 LSGYTHLDCAEESAFLFREMFRSGVE--PNYVTIASILPLCARVANLQHGKEFHCYILRR 440
++ Y A E+ FREM R + PN VT+ S+L CA +A L+ GK H YILRR
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 441 AMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKL 500
+ + L + ++LV MY R GK+ + VFD M RD V++ SLI+ YG+ G G+ A+++
Sbjct: 315 GL-DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 501 FEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYG 560
FEEM N P VT V+VL ACSH GLV EG++ FE M +GI PQ+EH+ACMVDL G
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 561 RAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVL 620
RA L++A +++ M P +W +LLG+C+IH N + E A+ +L P+N+G YVL
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 621 IANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPL 680
+A++YA WD++ +V+ + G++K+PG W++ F+ D N ++I+
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 681 LGGLTELMKDAGYV 694
L L E MK+ GY+
Sbjct: 554 LVKLAEDMKEKGYI 567
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 220/511 (43%), Gaps = 66/511 (12%)
Query: 21 FIPKKWKQP------INNEHI-----MRINLLETLKDFAGRGNLSKAFEAFTRIRITAAS 69
F+P+ +P +NN I +I+ + ++ G L +A IR+ +
Sbjct: 19 FLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQA------IRVLSQE 72
Query: 70 HDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNAC 129
++ +I CCG +L+ ++H + G +++P L KL+ Y+ + A
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 130 FLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKAC---- 185
+ + + R WN L G E L +Y +M + D FTY VLKAC
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 186 ---GEMMDVDFGRVVHSCID-ACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAV 241
+M G+ +H+ + + +++ LV MY +FG VD A +F M R+ V
Sbjct: 193 CTVNHLMK---GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVV 249
Query: 242 SWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRM 301
SW+ MI+ YA G EA + F EM E
Sbjct: 250 SWSAMIACYAKNGKAFEALRTFREMMRE-------------------------------- 277
Query: 302 RTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDL 361
T+++ +SV V L AC+ + AL+ GK IHG +R V +AL+TMY RC L
Sbjct: 278 -TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 362 RHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLC 421
+F ++ +++WNS++S Y +++ +F EM +G P VT S+L C
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 422 ARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPE-AKSVFDLMSRRDEVT 480
+ ++ GK + R + + +V++ R+ ++ E AK V D+ +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 481 YTSLIAGYGIQGE----GRVALKLFEEMNKN 507
+ SL+ I G R + +LF KN
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKN 487
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 329/657 (50%), Gaps = 42/657 (6%)
Query: 39 NLLETLKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFA--HIIFCCGKVKALAQGKQL 96
NL+ G + EA R+ + D+V D FA II C + GKQL
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAI-RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 97 HACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFY 156
HA I L + + L+ Y F+ ++A + ++ + W+ +I+ + + GF
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 157 AEALCVYKQMQSRRIRGDN-FTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNA 214
EAL K+M S + N + + S LKAC ++ D+G +H CI + + +
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 215 LVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVN 274
L MY + G ++ ARR+FD++ D S
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTAS-------------------------------- 338
Query: 275 VITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHG 334
WN I G G + + S+MR+ D+++ L A + AL G +IH
Sbjct: 339 ---WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 335 SAVRGCYGEYENVRNALITMYSRCKDLRHAYILFK-MTAEKSIITWNSMLSGYTHLDCAE 393
++ + V N+L+TMY+ C DL + LF+ ++WN++L+ +
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 394 ESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSL 453
E LF+ M S EP+++T+ ++L C +++L+ G + HCY L+ + E + N L
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFI-KNGL 514
Query: 454 VEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDH 513
++MYA+ G + +A+ +FD M RD V++++LI GY G G AL LF+EM I+P+H
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 514 VTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIIT 573
VT V VL+ACSH GLV EG K + M + +GI P EH +C+VDL RAG LN+A+ I
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 574 KMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDK 633
+M P +W TLL AC+ N + + AAE +L+ P NS +VL+ +M+A++G W+
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 634 LAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKD 690
A +R+ M+ V+KIPG +W++ + F +D + + +IY +L + M D
Sbjct: 695 AALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD 751
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 257/553 (46%), Gaps = 47/553 (8%)
Query: 55 KAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPK 114
+A EAF + +S + L ++ +I C ++LAQG+++H + + + +L
Sbjct: 49 EALEAFDFAQ-KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 115 LVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGD 174
+++ Y +A + + R + + +I+ Y ++G AEA+ +Y +M + D
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 175 NFTYPSVLKACGEMMDVDFGRVVHSCIDACHEWS-LFVHNALVSMYGKFGQVDVARRLFD 233
F + S++KAC DV G+ +H+ + S L NAL++MY +F Q+ A R+F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 234 KMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKG 293
+ +D +SW+++I+ ++ G EA EM G V N G
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG----VFHPNEYIFG--------- 274
Query: 294 VLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALIT 353
+ L + ++++ S + L + E+ G+A+ GC +L
Sbjct: 275 ------------SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC---------SLCD 313
Query: 354 MYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVT 413
MY+RC L A +F +WN +++G + A+E+ +F +M SG P+ ++
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 414 IASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVF-DL 472
+ S+L + L G + H YI++ F L + NSL+ MY + ++F D
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWG-FLADLTVCNSLLTMYTFCSDLYCCFNLFEDF 432
Query: 473 MSRRDEVTYTSLIAGYGIQGEGRVA-LKLFEEMNKNQIKPDHVTMVAVLSACSH-SGLVV 530
+ D V++ +++ +Q E V L+LF+ M ++ +PDH+TM +L C S L +
Sbjct: 433 RNNADSVSWNTILTAC-LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKL 491
Query: 531 EGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGA 590
Q + + G+ P+ ++D+Y + G L +A+ I M + W+TL+
Sbjct: 492 GSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS-WSTLIVG 548
Query: 591 CQIHRNTGIGEWA 603
+ +G GE A
Sbjct: 549 ---YAQSGFGEEA 558
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 205/467 (43%), Gaps = 48/467 (10%)
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSR-----RIRGDNFTYPSVLKACGEMM 189
S I+ N I+ + FY EAL + Q R+R TY S++ AC
Sbjct: 26 STIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLR----TYISLICACSSSR 81
Query: 190 DVDFGRVVHSCI-DACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMIS 248
+ GR +H I ++ ++ ++N ++SMYGK G + AR +FD M ER+ VS+ ++I+
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 249 AYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYL 308
Y+ G EA +L+++M +E + + + +I
Sbjct: 142 GYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSI--------------------------- 174
Query: 309 DSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILF 368
+ AC+ + LGK++H ++ + +NALI MY R + A +F
Sbjct: 175 --------IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 369 KMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGV-EPNYVTIASILPLCARVANL 427
K +I+W+S+++G++ L E+ +EM GV PN S L C+ +
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 428 QHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAG 487
+G + H ++ + + + SL +MYAR G + A+ VFD + R D ++ +IAG
Sbjct: 287 DYGSQIHGLCIKSELAG-NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 488 YGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFP 547
G A+ +F +M + PD +++ ++L A + + +G Q +G
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM-QIHSYIIKWGFLA 404
Query: 548 QLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIH 594
L ++ +Y L + S W T+L AC H
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/595 (31%), Positives = 316/595 (53%), Gaps = 57/595 (9%)
Query: 111 LVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRR 170
L +VT S+S + L E + + Y RD A+ +QS
Sbjct: 10 LFRPVVTLRCSYSSTDQTLLLSEFTRL-----------CYQRD--LPRAMKAMDSLQSHG 56
Query: 171 IRGDNFTYPSVLKACGEMMDVDFGRVV--HSCIDACHEWSLFVHNALVSMYGKFGQVDVA 228
+ D+ TY ++K C V G ++ H + H +F+ N L++MY KF ++ A
Sbjct: 57 LWADSATYSELIKCCISNRAVHEGNLICRHLYFNG-HRPMMFLVNVLINMYVKFNLLNDA 115
Query: 229 RRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRT 288
+LFD+M +R+ +SW TMISAY+ + ++A +L V M + V NV T++++ LR+
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSV----LRS 171
Query: 289 GNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVR 348
N + +L H G +K G E S V VR
Sbjct: 172 CNGMSDVRML-----------------------HCGIIKEGLE---SDVF--------VR 197
Query: 349 NALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVE 408
+ALI ++++ + A +F I WNS++ G+ ++ + LF+ M R+G
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 409 PNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKS 468
T+ S+L C +A L+ G + H +I++ +++ L+L N+LV+MY + G + +A
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALR 314
Query: 469 VFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGL 528
VF+ M RD +T++++I+G G + ALKLFE M + KP+++T+V VL ACSH+GL
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 529 VVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLL 588
+ +G F M +YGI P EH+ CM+DL G+AG L+ A +++ +M P + W TLL
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 589 GACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRK 648
GAC++ RN + E+AA+K++ PE++G Y L++N+YA + WD + ++RT MRD G++K
Sbjct: 435 GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 649 IPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEFCSEE 703
PGC+W++ F++ D S+ Q E+ L L + GYV + F ++
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQD 549
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 208/456 (45%), Gaps = 48/456 (10%)
Query: 40 LLETLKDFAGRGNLSKAFEAFTRIRITAASHDVVLDS--FAHIIFCCGKVKALAQGKQLH 97
LL + +L +A +A ++ SH + DS ++ +I CC +A+ +G +
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQ----SHGLWADSATYSELIKCCISNRAVHEGNLIC 84
Query: 98 ACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYA 157
G LV L+ Y F+L N+A L + R + W +IS Y + +
Sbjct: 85 RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144
Query: 158 EALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH-SCIDACHEWSLFVHNALV 216
+AL + M +R + +TY SVL++C M DV R++H I E +FV +AL+
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALI 201
Query: 217 SMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVI 276
++ K G+ + A +FD+M+ DA+ WN++I +A A +LF M+ G
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 277 TWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSA 336
T ++ L AC+ + L+LG + H
Sbjct: 262 TLTSV-----------------------------------LRACTGLALLELGMQAHVHI 286
Query: 337 VRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESA 396
V+ Y + + NAL+ MY +C L A +F E+ +ITW++M+SG ++E+
Sbjct: 287 VK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 397 FLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEM 456
LF M SG +PNY+TI +L C+ L+ G + + + + + ++++
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 457 YARSGKVPEAKSVFDLMS-RRDEVTYTSLIAGYGIQ 491
++GK+ +A + + M D VT+ +L+ +Q
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/623 (31%), Positives = 315/623 (50%), Gaps = 17/623 (2%)
Query: 86 KVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYA-SFSLYNNACFLV----ENSNIRYP 140
K K L KQ+ A I GL +P +L+ F A S S Y + + EN NI
Sbjct: 62 KCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNI--- 118
Query: 141 LPWNLLISLYVRDGFYAEALCVYKQMQSR---RIRGDNFTYPSVLKACGEMMDVDFGRVV 197
WN+ I + E+ +YKQM R D+FTYP + K C ++ G ++
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 198 HSCIDACH-EWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLW 256
+ E VHNA + M+ G ++ AR++FD+ RD VSWN +I+ Y G
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 257 KEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIG 316
++A ++ M+ EGV+ + +T + C G+ E ++ +
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 317 LGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSI 376
+ S G + + I + + + +I+ Y+RC L + LF EK +
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSW----TTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 377 ITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCY 436
+ WN+M+ G +++ LF+EM S +P+ +T+ L C+++ L G H Y
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 437 ILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRV 496
I + ++ + ++ L SLV+MYA+ G + EA SVF + R+ +TYT++I G + G+
Sbjct: 415 IEKYSL-SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 497 ALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMV 556
A+ F EM I PD +T + +LSAC H G++ G+ F +M S + + PQL+H++ MV
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 557 DLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSG 616
DL GRAGLL +A ++ MP +A+W LL C++H N +GE AA+KLLE P +SG
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 593
Query: 617 YYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQE 676
YVL+ MY W+ + R M + GV KIPGC+ ++ + F+V D S ++++
Sbjct: 594 IYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEK 653
Query: 677 IYPLLGGLTELMKDAGYVVKEEF 699
IY L L M+ + V+ E+
Sbjct: 654 IYDRLHCLGRHMRSSLSVLFSEY 676
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/604 (31%), Positives = 320/604 (52%), Gaps = 40/604 (6%)
Query: 106 EKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQ 165
+K+ +L L+ Y L A L + R + W +I+ Y + A A + +
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 166 MQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-DACHEWSLFVHNALVSMYGKFGQ 224
M + + FT SVLK+C M + +G +VH + E SL+V NA+++MY
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMY----- 156
Query: 225 VDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGG 284
A TM + A +F +++ + N +TW T+ G
Sbjct: 157 ---------------ATCSVTM----------EAACLIFRDIKVK----NDVTWTTLITG 187
Query: 285 CLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEY 344
G+ G L++ +M + + I + A + + ++ GK+IH S ++ +
Sbjct: 188 FTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSN 247
Query: 345 ENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFR 404
V N+++ +Y RC L A F +K +ITWN+++S D + E+ +F+
Sbjct: 248 LPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFES 306
Query: 405 SGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP 464
G PN T S++ CA +A L G++ H I RR FN+++ L N+L++MYA+ G +P
Sbjct: 307 QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG-FNKNVELANALIDMYAKCGNIP 365
Query: 465 EAKSVF-DLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSAC 523
+++ VF +++ RR+ V++TS++ GYG G G A++LF++M + I+PD + +AVLSAC
Sbjct: 366 DSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Query: 524 SHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAM 583
H+GLV +G K F M S YGI P + + C+VDL GRAG + +A E++ +MP+ P +
Sbjct: 426 RHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDEST 485
Query: 584 WATLLGACQIHRNTG-IGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMR 642
W +LGAC+ H++ G I AA K++E +P+ G YV+++ +YAA G W A+VR MR
Sbjct: 486 WGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMR 545
Query: 643 DLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVK-EEFCS 701
+G +K G +W+ N F V D A +Y +LG L E ++AGYV + + +
Sbjct: 546 MMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVN 605
Query: 702 EEEI 705
++E+
Sbjct: 606 DQEV 609
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 192/416 (46%), Gaps = 40/416 (9%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSL-YNNACFLVEN 134
+ + ++ C +K LA G +H + LG+E + + ++ YA+ S+ AC + +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFG 194
++ + W LI+ + G L +YKQM + ++A + V G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 195 RVVH-SCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASK 253
+ +H S I + +L V N+++ +Y + G + A+ F +M ++D ++WNT+IS +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ER 291
Query: 254 GLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVAT 313
EA +F + +G N T+ ++
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSL-------------------------------- 319
Query: 314 VIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILF-KMTA 372
+ AC+++ AL G+++HG R + + + NALI MY++C ++ + +F ++
Sbjct: 320 ---VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 373 EKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKE 432
+++++W SM+ GY E+ LF +M SG+ P+ + ++L C ++ G +
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 433 FHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMS-RRDEVTYTSLIAG 487
+ + N ++N +V++ R+GK+ EA + + M + DE T+ +++
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGA 492
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/578 (30%), Positives = 300/578 (51%), Gaps = 41/578 (7%)
Query: 77 FAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSN 136
F+ + C +++ L GK++H C + + V++ L+ YA +A + +
Sbjct: 145 FSKALKACTELQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 137 IRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRV 196
+R + W +I+ YV++ E L ++ +M+ + G+ +TY +++ AC ++ + G+
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 197 VHSC-IDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGL 255
H C + + E S + +L+ MY K G + ARR+F++ D V W MI Y
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT---- 319
Query: 256 WKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVI 315
G+ L L +M+ E + V
Sbjct: 320 -------------------------------HNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 316 GLGACSHVGALKLGKEIHGSAVRGCYGEYE-NVRNALITMYSRCKDLRHAYILFKMTAEK 374
L C + L+LG+ +HG +++ G ++ NV NAL+ MY++C R A +F+M +EK
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIK--VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 375 SIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFH 434
I+ WNS++SG++ E+ FLF M V PN VT+AS+ CA + +L G H
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 435 CYILRRAMF-NEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGE 493
Y ++ + + + +L++ YA+ G A+ +FD + ++ +T++++I GYG QG+
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 494 GRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA 553
+L+LFEEM K Q KP+ T ++LSAC H+G+V EG+K F M Y P +H+
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 554 CMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPE 613
CMVD+ RAG L +A +II KMP P + L C +H +GE +K+L+ P+
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD 646
Query: 614 NSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPG 651
++ YYVL++N+YA+ G W++ +VR M+ G+ KI G
Sbjct: 647 DASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 210/453 (46%), Gaps = 48/453 (10%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLV-EN 134
++ +I C K+ AL QGK H C + G+E + LV L+ Y +NA + E+
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 135 SNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFG 194
S++ + W +I Y +G EAL ++++M+ I+ + T SVL CG + +++ G
Sbjct: 304 SHVDLVM-WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 195 RVVHSCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKG 254
R VH W V NALV MY K Q A+ +F+ E+D V+WN++IS ++ G
Sbjct: 363 RSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 255 LWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATV 314
EA LF M E V N +T V L S
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVT----------------VASLFS--------------- 451
Query: 315 IGLGACSHVGALKLGKEIHGSAVRGCYGEYENVR--NALITMYSRCKDLRHAYILFKMTA 372
AC+ +G+L +G +H +V+ + +V AL+ Y++C D + A ++F
Sbjct: 452 ----ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE 507
Query: 373 EKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKE 432
EK+ ITW++M+ GY S LF EM + +PN T SIL C + GK+
Sbjct: 508 EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK 567
Query: 433 FHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEV-TYTSLIAGYGIQ 491
+ + + F + +V+M AR+G++ +A + + M + +V + + + G G+
Sbjct: 568 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 627
Query: 492 GE---GRVALKLFEEMNKNQIKPDHVTMVAVLS 521
G + +K +++ PD + ++S
Sbjct: 628 SRFDLGEIVIKKMLDLH-----PDDASYYVLVS 655
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 308/601 (51%), Gaps = 43/601 (7%)
Query: 63 IRITAASHDVVLDSFAH--IIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYA 120
IR+ + V D + + + G++K++ G +H + ++ + L+ Y
Sbjct: 104 IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYM 163
Query: 121 SFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPS 180
+F A + + R + WN +IS Y R+G+ +AL ++ M + + D+ T S
Sbjct: 164 NFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223
Query: 181 VLKACGEMMDVDFGRVVHSCIDACHEWS-LFVHNALVSMYGKFGQVDVARRLFDKMLERD 239
+L CG + D++ GR VH ++ + V NALV+MY K G++D AR +FD+M RD
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 240 AVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLS 299
VITW + G G+ + LEL
Sbjct: 284 -----------------------------------VITWTCMINGYTEDGDVENALELCR 308
Query: 300 RMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCK 359
M+ + ++V + C + GK +HG AVR + +LI+MY++CK
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 360 DLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILP 419
+ + +F ++ W+++++G + ++ LF+ M R VEPN T+ S+LP
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 420 LCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRR--- 476
A +A+L+ HCY L + F L LV +Y++ G + A +F+ + +
Sbjct: 429 AYAALADLRQAMNIHCY-LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 477 -DEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQ 535
D V + +LI+GYG+ G+G AL++F EM ++ + P+ +T + L+ACSHSGLV EG
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 536 FERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHR 595
F M Y + H+ C+VDL GRAG L++A +IT +P+ PTS +W LL AC H
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE 607
Query: 596 NTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWV 655
N +GE AA KL E PEN+G YVL+AN+YAA G W + KVR+ M ++G+RK PG + +
Sbjct: 608 NVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Query: 656 D 656
+
Sbjct: 668 E 668
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 249/531 (46%), Gaps = 53/531 (9%)
Query: 88 KALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLI 147
+++++ K LH C + G + ++ L YA A L E L +N++I
Sbjct: 29 QSISKTKALH-CHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVI 87
Query: 148 SLYVRDGFYAEALCVYKQMQSRRIR--GDNFTYPSVLKACGEMMDVDFGRVVHSCIDACH 205
+YVR+G Y +A+ V+ +M S ++ D +TYP V KA GE+ + G VVH I
Sbjct: 88 RMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI--LR 145
Query: 206 EW---SLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQL 262
W +V NAL++MY FG+V++AR +FD M RD +SWNTMIS Y G +A +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 263 FVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSH 322
F M E V+ LD V L C H
Sbjct: 206 FDWMVNESVD-----------------------------------LDHATIVSMLPVCGH 230
Query: 323 VGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSM 382
+ L++G+ +H G+ V+NAL+ MY +C + A +F + +ITW M
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 383 LSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAM 442
++GYT E + L R M GV PN VTIAS++ +C + GK H + +R+ +
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 443 FNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGE-GRVALKLF 501
+++ +++ SL+ MYA+ +V VF S+ ++++IAG +Q E AL LF
Sbjct: 351 YSD-IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG-CVQNELVSDALGLF 408
Query: 502 EEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGR 561
+ M + ++P+ T+ ++L A + + + +T G L+ +V +Y +
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSK 467
Query: 562 AGLLNKAKEI---ITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLE 609
G L A +I I + + +W L+ +H G G A + +E
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH---GDGHNALQVFME 515
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 34/356 (9%)
Query: 178 YPSVLKACGEMMDVDFGRVVHSCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLE 237
Y S+L + + +H + S + + L Y G + AR+LF++M +
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 238 RDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLEL 297
+S+N +I Y +GL+ +A +F+ M EGV+ C+ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK------------CVPDG-------- 117
Query: 298 LSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSR 357
TY VA G + ++KLG +HG +R +G + V+NAL+ MY
Sbjct: 118 -------YTY-PFVAKAAG-----ELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMN 164
Query: 358 CKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASI 417
+ A +F + + +I+WN+M+SGY ++ +F M V+ ++ TI S+
Sbjct: 165 FGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSM 224
Query: 418 LPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRD 477
LP+C + +L+ G+ H ++ + + + N+LV MY + G++ EA+ VFD M RRD
Sbjct: 225 LPVCGHLKDLEMGRNVH-KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 478 EVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQ 533
+T+T +I GY G+ AL+L M ++P+ VT+ +++S C + V +G+
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/584 (33%), Positives = 310/584 (53%), Gaps = 54/584 (9%)
Query: 130 FLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMM 189
+L + S+ P N +I+ VR G AL V+ M+++ N + K MM
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 190 DVDFGRVVHSCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISA 249
+ H D E F +N ++S Y + + A+ FD+M +DA SWNTMI+
Sbjct: 111 EA------HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164
Query: 250 YASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLD 309
YA +G ++A +LF M E+ N ++WN + G + G+ + + ++
Sbjct: 165 YARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLE-----------KASHFF 209
Query: 310 SVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFK 369
VA V G+ A + A+IT Y + K + A +FK
Sbjct: 210 KVAPVRGVVAWT----------------------------AMITGYMKAKKVELAEAMFK 241
Query: 370 -MTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQ 428
MT K+++TWN+M+SGY E+ LFR M G+ PN ++S L C+ ++ LQ
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 429 HGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGY 488
G++ H + + + N+ L SL+ MY + G++ +A +F++M ++D V + ++I+GY
Sbjct: 302 LGRQIHQIVSKSTLCNDVTAL-TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 489 GIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQ 548
G AL LF EM N+I+PD +T VAVL AC+H+GLV G FE M Y + PQ
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 549 LEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLL 608
+H+ CMVDL GRAG L +A ++I MP+ P +A++ TLLGAC++H+N + E+AAEKLL
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 609 ETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDD 668
+ +N+ YV +AN+YA+ W+ +A+VR M++ V K+PG +W++ N F D
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD 540
Query: 669 TSNVQAQEIYPLLGGLTELMKDAGYVVKEEFC---SEEEIVEEI 709
+ + I+ L L + MK AGY + EF EEE E++
Sbjct: 541 RIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKL 584
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 84 CGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPW 143
C ++ AL G+Q+H L + + L++ Y +A L E + + W
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 144 NLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI-- 201
N +IS Y + G +ALC++++M +IR D T+ +VL AC V+ G +
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 202 DACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLER-DAVSWNTMISA 249
D E + +V + G+ G+++ A +L M R A + T++ A
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGA 462
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 313 bits (802), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 315/609 (51%), Gaps = 21/609 (3%)
Query: 97 HACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFY 156
H+ A L +L L +F+AS +++ F N +++ R +
Sbjct: 3 HSNARKLTTLHGFILKRNLSSFHASLKRFSDKKFFNPNHE-----DGGVVVERLCRANRF 57
Query: 157 AEA---LCVYK------QMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCIDAC-HE 206
EA LC K Q+ R + TY ++++ C + ++ G+ VH I
Sbjct: 58 GEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFV 117
Query: 207 WSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEM 266
+ + N L+ MY K G + AR++FD+M RD SWN M++ YA GL +EA +LF EM
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 267 QEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATV-IGLGACSHVGA 325
E+ + +W + G ++ + L L S M+ ++ TV I + A + V
Sbjct: 178 TEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 326 LKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSG 385
++ GKEIHG VR E + ++L+ MY +C + A +F EK +++W SM+
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 386 YTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNE 445
Y E LF E+ S PN T A +L CA + + GK+ H Y + R F+
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY-MTRVGFDP 352
Query: 446 HLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMN 505
+ +SLV+MY + G + AK V D + D V++TSLI G G+ ALK F+ +
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 506 KNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLL 565
K+ KPDHVT V VLSAC+H+GLV +G + F +T + + +H+ C+VDL R+G
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 566 NKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMY 625
+ K +I++MP P+ +WA++LG C + N + E AA++L + PEN YV +AN+Y
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 626 AATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLT 685
AA G W++ K+R M+++GV K PG +W + F+ DTS+ +I L L
Sbjct: 533 AAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELR 592
Query: 686 ELMKDAGYV 694
+ MK+ GYV
Sbjct: 593 KKMKEEGYV 601
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/571 (23%), Positives = 241/571 (42%), Gaps = 89/571 (15%)
Query: 16 SQLEKFIPKKWKQPINN------EHIMRINLL-ETLKDFAGRGNLSKAFEAFTRIRITAA 68
+ L++F KK+ P + E + R N E + G+ L +A + R + A
Sbjct: 26 ASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPA 85
Query: 69 SHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKL------------- 115
S ++ ++I C + +AL +GK++H G V+ +L
Sbjct: 86 S------TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDA 139
Query: 116 ------------------VTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYA 157
V YA L A L + + W +++ YV+
Sbjct: 140 RKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPE 199
Query: 158 EALCVYKQMQS-RRIRGDNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNAL 215
EAL +Y MQ R + FT + A + + G+ +H + A + + ++L
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 216 VSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNV 275
+ MYGK G +D AR +FDK++E+D VSW +MI Y W+E F LF E+
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL--------- 310
Query: 276 ITWNTIAGGCLRTG--NFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIH 333
G C R F GV L AC+ + +LGK++H
Sbjct: 311 ------VGSCERPNEYTFAGV----------------------LNACADLTTEELGKQVH 342
Query: 334 GSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAE 393
G R + Y ++L+ MY++C ++ A + + +++W S++ G +
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
Query: 394 ESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSL 453
E+ F + +SG +P++VT ++L C ++ G EF I + + + L
Sbjct: 403 EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCL 462
Query: 454 VEMYARSGKVPEAKSVFDLMSRR-DEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPD 512
V++ ARSG+ + KSV M + + + S++ G G +A + +E+ K I+P+
Sbjct: 463 VDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPE 520
Query: 513 H-VTMVAVLSACSHSGLVVEGQKQFERMTSI 542
+ VT V + + + +G E K +RM I
Sbjct: 521 NPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 311 bits (798), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 295/560 (52%), Gaps = 50/560 (8%)
Query: 142 PWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCI 201
PWN+ + ++E++ +Y+ M D F++P +LK+C + G+ +H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH--- 76
Query: 202 DACH------EWSLFVHNALVSMYGKFGQVDVARRLFDKMLERD--AVSWNTMISAYASK 253
CH E FV AL+SMY K G V AR++F++ + +V +N +IS Y +
Sbjct: 77 --CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTAN 134
Query: 254 GLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVAT 313
+A +F M+E GV V+ +T G++ L
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVT-------------MLGLVPL---------------- 165
Query: 314 VIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAE 373
C+ L LG+ +HG V+G V N+ ITMY +C + LF
Sbjct: 166 ------CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV 219
Query: 374 KSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEF 433
K +ITWN+++SGY+ A + L+ +M SGV P+ T+ S+L CA + + G E
Sbjct: 220 KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279
Query: 434 HCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGE 493
++ F ++ + N+ + MYAR G + +A++VFD+M + V++T++I YG+ G
Sbjct: 280 G-KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 494 GRVALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFA 553
G + L LF++M K I+PD V VLSACSHSGL +G + F M Y + P EH++
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398
Query: 554 CMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPE 613
C+VDL GRAG L++A E I MP P A+W LLGAC+IH+N + E A K++E P
Sbjct: 399 CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPN 458
Query: 614 NSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQ 673
N GYYVL++N+Y+ + + + ++R MR+ RK PG ++V+ FL D S+ Q
Sbjct: 459 NIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQ 518
Query: 674 AQEIYPLLGGL-TELMKDAG 692
+E++ +L L T +M+ AG
Sbjct: 519 TEEVHRMLDELETSVMELAG 538
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 195/438 (44%), Gaps = 50/438 (11%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
L++ A + S++ + + + +S D SF I+ C + G+QLH
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAF--SFPFILKSCASLSLPVSGQQLHCHVTKG 82
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENS--NIRYPLPWNLLISLYVRDGFYAEALC 161
G E P ++ L++ Y L +A + E + + + + +N LIS Y + +A
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAY 142
Query: 162 VYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVH-SCIDACHEWSLFVHNALVSMYG 220
++++M+ + D+ T ++ C + GR +H C+ + + V N+ ++MY
Sbjct: 143 MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 221 KFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNT 280
K G V+ RRLFD+M + ++WN +IS Y+ GL + +L+ +M+ GV + T +
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 281 IAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGC 340
+ L +C+H+GA K+G E+
Sbjct: 263 V-----------------------------------LSSCAHLGAKKIGHEVGKLVESNG 287
Query: 341 YGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFR 400
+ V NA I+MY+RC +L A +F + KS+++W +M+ Y E LF
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFD 347
Query: 401 EMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLL-----LWNSLVE 455
+M + G+ P+ +L C+ G E L RAM E+ L ++ LV+
Sbjct: 348 DMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE-----LFRAMKREYKLEPGPEHYSCLVD 402
Query: 456 MYARSGKVPEAKSVFDLM 473
+ R+G++ EA + M
Sbjct: 403 LLGRAGRLDEAMEFIESM 420
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 303/583 (51%), Gaps = 50/583 (8%)
Query: 86 KVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPL---- 141
+ K L +Q+HA I G E VL L Y + +N +S R P
Sbjct: 16 QAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAY----IQSNRLDFATSSFNRIPCWKRN 71
Query: 142 --PWNLLISLYVRDGF--YAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVV 197
WN ++S Y + Y++ L +Y +M+ D+F +KAC + ++ G ++
Sbjct: 72 RHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILI 131
Query: 198 HS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLW 256
H + + +V +LV MY + G ++ A+++FD++ R
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR------------------ 173
Query: 257 KEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIG 316
N + W + G L+ V L MR LD++ +
Sbjct: 174 -----------------NSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICL 216
Query: 317 LGACSHVGALKLGKEIHGSAVRGCY-GEYENVRNALITMYSRCKDLRHAYILFKMTAEKS 375
+ AC +V A K+GK +HG ++R + + + ++ ++I MY +C+ L +A LF+ + +++
Sbjct: 217 VKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRN 276
Query: 376 IITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHC 435
++ W +++SG+ + A E+ LFR+M R + PN T+A+IL C+ + +L+HGK H
Sbjct: 277 VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHG 336
Query: 436 YILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGR 495
Y++R + + + S ++MYAR G + A++VFD+M R+ ++++S+I +GI G
Sbjct: 337 YMIRNGI-EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395
Query: 496 VALKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACM 555
AL F +M + P+ VT V++LSACSHSG V EG KQFE MT YG+ P+ EH+ACM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455
Query: 556 VDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENS 615
VDL GRAG + +AK I MP P ++ W LL AC+IH+ + AEKLL PE S
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKS 515
Query: 616 GYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAG 658
YVL++N+YA G W+ + VR M G RK G + + G
Sbjct: 516 SVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 215/457 (47%), Gaps = 50/457 (10%)
Query: 74 LDSFAHI--IFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFL 131
+DSF + I C + L G +H A+ GL+K+ + P LV YA +A +
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 132 VENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDV 191
+ +R + W +L+ Y++ E ++ M+ + D T ++KACG +
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAG 226
Query: 192 DFGRVVH--SCIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISA 249
G+ VH S + + S ++ +++ MY K +D AR+LF+ ++R+ V W T+IS
Sbjct: 227 KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISG 286
Query: 250 YASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLD 309
+A EAF LF +M E + N T I
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAI---------------------------- 318
Query: 310 SVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVR-NALITMYSRCKDLRHAYILF 368
L +CS +G+L+ GK +HG +R E + V + I MY+RC +++ A +F
Sbjct: 319 -------LVSCSSLGSLRHGKSVHGYMIRNGI-EMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 369 KMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQ 428
M E+++I+W+SM++ + EE+ F +M V PN VT S+L C+ N++
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 429 HG-KEFHCYILRRAMF--NEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVT-YTSL 484
G K+F + EH + +V++ R+G++ EAKS D M + + + +L
Sbjct: 431 EGWKQFESMTRDYGVVPEEEH---YACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 485 IAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLS 521
++ I E +A ++ E++ ++P+ ++ +LS
Sbjct: 488 LSACRIHKEVDLAGEIAEKL--LSMEPEKSSVYVLLS 522
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 55 KAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIALG-LEKNPVLVP 113
+ F F +R T + D + + ++ CG V A GK +H +I ++++ L
Sbjct: 193 EVFRLFCLMRDTGLALDAL--TLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 114 KLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRG 173
++ Y L +NA L E S R + W LIS + + EA +++QM I
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 174 DNFTYPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLF 232
+ T ++L +C + + G+ VH I E + + MY + G + +AR +F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 233 DKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFK 292
D M ER+ +SW++MI+A+ GL++EA F +M+ + V N +T+ ++ C +GN K
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 198/658 (30%), Positives = 323/658 (49%), Gaps = 41/658 (6%)
Query: 44 LKDFAGRGNLSKAFEAFTRIRITAASHDVVLDSFAHIIFCCGKVKALAQGKQLHACAIAL 103
L ++ G S + F + + D V +F ++ KV +LA G+Q+H A+ L
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQV--TFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 104 GLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLISLYVRDGFYAEALCVY 163
GL+ + L+ Y + A + +N + R + WN +I+ ++G EA+C++
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 164 KQMQSRRIRGDNFTYPSVLKACGEMMD-VDFGRVVHSCIDACHEWSLFVHNALVSMYGKF 222
Q+ ++ D +T SVLKA + + + + VH VH K
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH------------VHAI------KI 446
Query: 223 GQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIA 282
V D+ +I AY+ KEA LF E +++ WN +
Sbjct: 447 NNVS------------DSFVSTALIDAYSRNRCMKEAEILF-----ERHNFDLVAWNAMM 489
Query: 283 GGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYG 342
G ++ + L+L + M Q D C + A+ GK++H A++ Y
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 343 EYENVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAF-LFRE 401
V + ++ MY +C D+ A F + W +M+SG + EE AF +F +
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE-NGEEERAFHVFSQ 608
Query: 402 MFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSG 461
M GV P+ TIA++ + + L+ G++ H L+ N+ + SLV+MYA+ G
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV-GTSLVDMYAKCG 667
Query: 462 KVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLS 521
+ +A +F + + + +++ G GEG+ L+LF++M IKPD VT + VLS
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 522 ACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTS 581
ACSHSGLV E K M YGI P++EH++C+ D GRAGL+ +A+ +I M ++
Sbjct: 728 ACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787
Query: 582 AMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCM 641
+M+ TLL AC++ +T G+ A KLLE P +S YVL++NMYAA WD++ RT M
Sbjct: 788 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 642 RDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYVVKEEF 699
+ V+K PG +W++ N F+VDD SN Q + IY + + +K GYV + +F
Sbjct: 848 KGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDF 905
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 234/547 (42%), Gaps = 53/547 (9%)
Query: 90 LAQGKQLHACAIALGLEKNP--VLVPKLVTFYASFSLYNNACFLVENSNIRYPLPWNLLI 147
L GK HA L E+NP L+ L++ Y+ A + + R + WN ++
Sbjct: 55 LMLGKCTHA--RILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 148 SLYVRDG-----FYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID 202
+ Y + +A +++ ++ + T +LK C V H
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY-- 170
Query: 203 ACH---EWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKEA 259
AC + FV ALV++Y KFG+V + LF++M RD V WN M+ AY G +EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 260 FQLFVEMQEEGVEVNVITWNTIA----------------------------------GGC 285
L G+ N IT +A
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 286 LRTGNFKGVLELLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYE 345
L +G + +L+ + M + D V ++ L V +L LG+++H A++
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 346 NVRNALITMYSRCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRS 405
V N+LI MY + + A +F +E+ +I+WNS+++G E+ LF ++ R
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 406 GVEPNYVTIASILPLCARVAN-LQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVP 464
G++P+ T+ S+L + + L K+ H + ++ ++ + +L++ Y+R+ +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRCMK 469
Query: 465 EAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACS 524
EA+ +F+ D V + +++AGY +G LKLF M+K + D T+ V C
Sbjct: 470 EAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 525 HSGLVVEGQKQFERMTSIYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMW 584
+ +G KQ G L + ++D+Y + G ++ A+ +P P W
Sbjct: 529 FLFAINQG-KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP-VPDDVAW 586
Query: 585 ATLLGAC 591
T++ C
Sbjct: 587 TTMISGC 593
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 318/618 (51%), Gaps = 56/618 (9%)
Query: 86 KVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFL---VENSNIRYPLP 142
K L Q KQLHA I L ++ + PKL++ + N A + V+ N+
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL--- 84
Query: 143 WNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHSCID 202
N LI + ++ +A V+ +MQ + DNFTYP +LKAC + +++H+ I+
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 203 ACHEWS-LFVHNALVSMYGKFGQVDV--ARRLFDKMLERDAVSWNTMISAYASKGLWKEA 259
S ++V NAL+ Y + G + V A +LF+KM ERD VSWN+M+ G ++A
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 260 FQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLGA 319
+LF EM + ++I+WNT+ G R EL +M + T S
Sbjct: 205 RRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST-------- 252
Query: 320 CSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILF-KMT-AEKSII 377
++ YS+ D+ A ++F KM K+++
Sbjct: 253 -------------------------------MVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 378 TWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYI 437
TW +++GY +E+ L +M SG++ + + SIL C L G H I
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS-I 340
Query: 438 LRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRDEVTYTSLIAGYGIQGEGRVA 497
L+R+ + + N+L++MYA+ G + +A VF+ + ++D V++ +++ G G+ G G+ A
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEA 400
Query: 498 LKLFEEMNKNQIKPDHVTMVAVLSACSHSGLVVEGQKQFERMTSIYGIFPQLEHFACMVD 557
++LF M + I+PD VT +AVL +C+H+GL+ EG F M +Y + PQ+EH+ C+VD
Sbjct: 401 IELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVD 460
Query: 558 LYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGY 617
L GR G L +A +++ MP P +W LLGAC++H I + + L++ P + G
Sbjct: 461 LLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGN 520
Query: 618 YVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAWVDAGNVFSPFLVDDTSNVQAQEI 677
Y L++N+YAA W+ +A +R+ M+ +GV K G + V+ + F V D S+ ++ +I
Sbjct: 521 YSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQI 580
Query: 678 YPLLGGLTELMKDAGYVV 695
Y +LG L E D G +V
Sbjct: 581 YQMLGSLIE-PPDPGELV 597
Score = 40.4 bits (93), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 10/176 (5%)
Query: 418 LPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRRD 477
LP CA NL K+ H I+RR + +E L + L+ + + A VF+ + +
Sbjct: 26 LPKCA---NLNQVKQLHAQIIRRNL-HEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPN 81
Query: 478 EVTYTSLIAGYGIQGEGRVALKLFEEMNKNQIKPDHVTMVAVLSACS-HSGLVVEGQKQF 536
SLI + + A +F EM + + D+ T +L ACS S L V K
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV--VKMM 139
Query: 537 ERMTSIYGIFPQLEHFACMVDLYGRAGLL--NKAKEIITKMPYTPTSAMWATLLGA 590
G+ + ++D Y R G L A ++ KM T + W ++LG
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGG 194
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 308 bits (790), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 285/520 (54%), Gaps = 39/520 (7%)
Query: 178 YPSVLKACGEMMDVDFGRVVHS-CIDACHEWSLFVHNALVSMYGKFGQVDVARRLFDKML 236
Y ++L AC + + G+ VH+ I + + ++ L+ YGK ++ AR++ D+M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 237 ERDAVSWNTMISAYASKGLWKEAFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLE 296
E++ VSW MIS Y+ G EA +F EM + N T+ T+ C+R
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRAS------- 167
Query: 297 LLSRMRTQETYLDSVATVIGLGACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYS 356
GLG LGK+IHG V+ Y + V ++L+ MY+
Sbjct: 168 -------------------GLG---------LGKQIHGLIVKWNYDSHIFVGSSLLDMYA 199
Query: 357 RCKDLRHAYILFKMTAEKSIITWNSMLSGYTHLDCAEESAFLFREMFRSGVEPNYVTIAS 416
+ ++ A +F+ E+ +++ ++++GY L EE+ +F + G+ PNYVT AS
Sbjct: 200 KAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYAS 259
Query: 417 ILPLCARVANLQHGKEFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSRR 476
+L + +A L HGK+ HC++LRR + + +L NSL++MY++ G + A+ +FD M R
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRREL-PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
Query: 477 DEVTYTSLIAGYGIQGEGRVALKLFEEM-NKNQIKPDHVTMVAVLSACSHSGLVVEGQKQ 535
+++ +++ GY G GR L+LF M ++ ++KPD VT++AVLS CSH + G
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 536 FERMTS-IYGIFPQLEHFACMVDLYGRAGLLNKAKEIITKMPYTPTSAMWATLLGACQIH 594
F+ M + YG P EH+ C+VD+ GRAG +++A E I +MP PT+ + +LLGAC++H
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Query: 595 RNTGIGEWAAEKLLETRPENSGYYVLIANMYAATGCWDKLAKVRTCMRDLGVRKIPGCAW 654
+ IGE +L+E PEN+G YV+++N+YA+ G W + VR M V K PG +W
Sbjct: 439 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 498
Query: 655 VDAGNVFSPFLVDDTSNVQAQEIYPLLGGLTELMKDAGYV 694
+ F +D ++ + +E+ + ++ MK AGYV
Sbjct: 499 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 538
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 188/404 (46%), Gaps = 51/404 (12%)
Query: 80 IIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENSNIRY 139
++ C +AL G+++HA I L +L+ FY +A +++ +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 140 PLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGRVVHS 199
+ W +IS Y + G +EAL V+ +M + + FT+ +VL +C + G+ +H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 200 CIDA-CHEWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISAYASKGLWKE 258
I ++ +FV ++L+ MY K GQ+ AR +F+ + ERD VS +I+ YA GL +E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 259 AFQLFVEMQEEGVEVNVITWNTIAGGCLRTGNFKGVLELLSRMRTQETYLDSVATVIGLG 318
A ++F + EG+ N +T+ ++ L
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASL-----------------------------------LT 262
Query: 319 ACSHVGALKLGKEIHGSAVRGCYGEYENVRNALITMYSRCKDLRHAYILFKMTAEKSIIT 378
A S + L GK+ H +R Y ++N+LI MYS+C +L +A LF E++ I+
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 379 WNSMLSGYTHLDCAEESAFLFREMF-RSGVEPNYVTIASILPLCARVA------NLQHGK 431
WN+ML GY+ E LFR M V+P+ VT+ ++L C+ N+ G
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Query: 432 EFHCYILRRAMFNEHLLLWNSLVEMYARSGKVPEAKSVFDLMSR 475
Y + EH + +V+M R+G++ EA F+ + R
Sbjct: 383 VAGEYGTKPG--TEH---YGCIVDMLGRAGRIDEA---FEFIKR 418
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 76 SFAHIIFCCGKVKALAQGKQLHACAIALGLEKNPVLVPKLVTFYASFSLYNNACFLVENS 135
+FA ++ C + L GKQ+H + + + + L+ YA A + E
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECL 214
Query: 136 NIRYPLPWNLLISLYVRDGFYAEALCVYKQMQSRRIRGDNFTYPSVLKACGEMMDVDFGR 195
R + +I+ Y + G EAL ++ ++ S + + TY S+L A + +D G+
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 196 VVHSCIDACH------EWSLFVHNALVSMYGKFGQVDVARRLFDKMLERDAVSWNTMISA 249
H CH + + N+L+ MY K G + ARRLFD M ER A+SWN M+
Sbjct: 275 QAH-----CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 329
Query: 250 YASKGLWKEAFQLFVEMQEEG-VEVNVITWNTIAGGC 285
Y+ GL +E +LF M++E V+ + +T + GC
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 258,278,267
Number of Sequences: 539616
Number of extensions: 10646016
Number of successful extensions: 31426
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 21808
Number of HSP's gapped (non-prelim): 2598
length of query: 710
length of database: 191,569,459
effective HSP length: 125
effective length of query: 585
effective length of database: 124,117,459
effective search space: 72608713515
effective search space used: 72608713515
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)