Query 005176
Match_columns 710
No_of_seqs 235 out of 1379
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 17:42:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fkm_A Protein (GYP1P), ORF YO 100.0 1.2E-42 4.2E-47 371.7 23.2 260 18-357 82-386 (396)
2 2qfz_A TBC1 domain family memb 100.0 4.5E-42 1.5E-46 358.4 23.5 236 19-357 101-340 (345)
3 2qq8_A TBC1 domain family memb 100.0 1.6E-41 5.6E-46 354.4 19.9 201 20-349 107-308 (334)
4 3qye_A TBC1 domain family memb 100.0 3.2E-40 1.1E-44 342.1 22.9 201 22-350 103-308 (331)
5 4hl4_A TBC1 domain family memb 100.0 4.2E-40 1.4E-44 337.2 19.9 204 20-353 80-289 (292)
6 3hzj_A Rabgap1L, RAB GTPase-ac 100.0 5.6E-40 1.9E-44 338.0 19.5 200 21-349 68-274 (310)
7 3qwl_A TBC1 domain family memb 99.9 1.5E-27 5.1E-32 247.7 17.2 143 175-358 149-291 (294)
8 2cwy_A Hypothetical protein TT 13.8 1.2E+02 0.004 26.4 3.1 48 301-349 41-91 (94)
9 3kat_A Nacht, LRR and PYD doma 9.2 2.3E+02 0.008 25.4 3.5 26 216-241 79-104 (107)
10 2js3_A Uncharacterized protein 8.6 90 0.0031 27.3 0.5 12 64-75 16-27 (96)
No 1
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A*
Probab=100.00 E-value=1.2e-42 Score=371.69 Aligned_cols=260 Identities=23% Similarity=0.359 Sum_probs=198.4
Q ss_pred CChHHHHHHHHhhchhCCCCccCCCChhHHHHHHHHHHHHHHhCCCCcccCChhHHHHHHHHHhhhhhhhhhhhcccccc
Q 005176 18 RSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHED 97 (710)
Q Consensus 18 rd~ElekqIdkDL~RTfpe~~~~Fq~~~~q~~LrRIL~ayal~~PevGY~QGMneIaApLLyVl~~D~~~l~ev~~~yed 97 (710)
.+.++.++|++||.||||++ .+|+.+..+++|+|||++||.+||++|||||||+|+||||+++..+.....+
T Consensus 82 ~~~~~~~qI~~Dv~RT~p~~-~~F~~~~~~~~L~rIL~aya~~np~iGY~QGmn~i~a~ll~v~~~~~~~~~~------- 153 (396)
T 1fkm_A 82 RDIPTWHQIEIDIPRTNPHI-PLYQFKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFFETFLTEYLPPSQ------- 153 (396)
T ss_dssp THHHHHHHHHHHGGGSSTTS-GGGGSHHHHHHHHHHHHHHHHHCTTTCSCTTHHHHHHHHHHHHHGGGSCGGG-------
T ss_pred ccHHHHHHHHHHhhhhCCCc-ccccCchHHHHHHHHHHHHHHHCCCCCcccCcHHHHHHHHHHHHHhhccccc-------
Confidence 45678899999999999999 9999999999999999999999999999999999999999998643100000
Q ss_pred ccccccCCCccccCccccccccccccccchhccccCCCCccccccCC-CChhhHHHHhhccccccccchhhcccccccHH
Q 005176 98 HFTDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRSVDE-LDPEIQTIVQLSDAYGAEGELGIVLSEKFMEH 176 (710)
Q Consensus 98 ~f~d~fDg~~~~e~d~~y~~~~~~~~~~~e~e~~~~g~~~~i~slde-ldpe~~~i~~~~d~yg~egelg~vLs~k~~Ea 176 (710)
.++.+. + +.+. ++.+. ...+|+
T Consensus 154 --~~~~~~-----------~-----------------------~~~~~l~~~~---------------------~~~~E~ 176 (396)
T 1fkm_A 154 --IDDVEI-----------K-----------------------DPSTYMVDEQ---------------------ITDLEA 176 (396)
T ss_dssp --GGGTTT-----------S-----------------------CGGGTCCHHH---------------------HHHHHH
T ss_pred --cccccc-----------c-----------------------chhhccchhh---------------------hhhhHH
Confidence 000000 0 0000 11110 124599
Q ss_pred HHHHHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHhhC
Q 005176 177 DAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFG 256 (710)
Q Consensus 177 DAF~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltLFa 256 (710)
||||||.+||... .++|.. +++++...+..+..||+.+||+||+||.++||+|.+|+++||+|||+
T Consensus 177 daF~~f~~lm~~~------~~~f~~--------~~~~i~~~~~~l~~LL~~~dP~L~~hL~~~~i~~~~f~~rW~l~LF~ 242 (396)
T 1fkm_A 177 DTFWCLTKLLEQI------TDNYIH--------GQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLM 242 (396)
T ss_dssp HHHHHHHHHHGGG------GGGSST--------TCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCTHHHHHHHHHTTTG
T ss_pred HHHHHHHHHHHHH------HHHHhh--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 9999999999974 478865 57899999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHhccCCCCC-----C---------CCCC--C----------------C--C-----C-CCcccccC
Q 005176 257 REFSLGDLLIIWDEIFASDSSKV-----N---------KDTE--D----------------D--A-----G-SGFGILSS 296 (710)
Q Consensus 257 REFpLe~vLrIWD~ifa~g~~~~-----~---------~~~e--~----------------~--~-----~-~~F~I~~s 296 (710)
|+||+++++||||.||++|.... . ...+ . . . . ..++++.+
T Consensus 243 ~~~p~~~vlrlWD~~l~eg~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (396)
T 1fkm_A 243 REFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQS 322 (396)
T ss_dssp GGSCHHHHHHHHHHHHHHHC------------------------------------------------------------
T ss_pred hhCCHHHHHHHHHHHHHCCCccccchhhhhcccccCCccccccccccccccccccccccccccccccccccccchhcccc
Confidence 99999999999999999881000 0 0000 0 0 0 0 01112222
Q ss_pred chhHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHhhcC
Q 005176 297 PRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVN----INLKKIIGKTKSLQALALDAN 357 (710)
Q Consensus 297 ~r~~fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~nfP~~----iDv~~LI~kA~~Lq~~~~~~~ 357 (710)
+...|+++||+|||..+|+.||+.++ +++|++|+++|.. .|++.||.+|..++..+..+.
T Consensus 323 ~~~~~~~~v~~AlL~~~r~~Ll~~df-~~~l~~L~~~p~~~~~~~di~~ll~~A~~l~~~~~~~~ 386 (396)
T 1fkm_A 323 SLNEFHVFVCAAFLIKWSDQLMEMDF-QETITFLQNPPTKDWTETDIEMLLSEAFIWQSLYKDAT 386 (396)
T ss_dssp CHHHHHHHHHHHHHHHTHHHHTTCCH-HHHHHHHTSCSCTTCCHHHHHHHHHHHHHHHHHHC---
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHhcCCCCCcccccHHHHHHHHHHHHHHHhccH
Confidence 33478999999999999999999874 8999999999974 699999999999999886543
No 2
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=100.00 E-value=4.5e-42 Score=358.37 Aligned_cols=236 Identities=22% Similarity=0.407 Sum_probs=195.4
Q ss_pred ChHHHHHHHHhhchhCCCCccCCCChhHHHHHHHHHHHHHHhCCCCcccCChhHHHHHHHHHhhhhhhhhhhhccccccc
Q 005176 19 SAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDH 98 (710)
Q Consensus 19 d~ElekqIdkDL~RTfpe~~~~Fq~~~~q~~LrRIL~ayal~~PevGY~QGMneIaApLLyVl~~D~~~l~ev~~~yed~ 98 (710)
+.+..++|++||.||+|+ ++|+.+..+++|+|||.+||.+||++|||||||+|+||||+++..+..
T Consensus 101 ~~~~~~~I~~Dv~RT~p~--~~F~~~~~~~~L~rIL~~ya~~~p~vgY~QGm~~i~a~ll~v~~~~~~------------ 166 (345)
T 2qfz_A 101 HQDTYRQIHIDIPRMSPE--ALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYI------------ 166 (345)
T ss_dssp CHHHHHHHHHHGGGCSCH--HHHTSHHHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHGGGC------------
T ss_pred hHHHHHHHHHhCcccCCc--cccCCchHHHHHHHHHHHHHHHCCCCCcccChHHHHHHHHHHHHhhhc------------
Confidence 456889999999999998 799999999999999999999999999999999999999999864311
Q ss_pred cccccCCCccccCccccccccccccccchhccccCCCCccccccCCCChhhHHHHhhccccccccchhhcccccccHHHH
Q 005176 99 FTDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDA 178 (710)
Q Consensus 99 f~d~fDg~~~~e~d~~y~~~~~~~~~~~e~e~~~~g~~~~i~sldeldpe~~~i~~~~d~yg~egelg~vLs~k~~EaDA 178 (710)
. +.|.. ++ +++.++.+.. ...|++|
T Consensus 167 -~---------~~~~~-~~-----------------------~~~~l~~~~~---------------------~~~E~da 191 (345)
T 2qfz_A 167 -E---------AEEVD-TV-----------------------DVSGVPAEVL---------------------CNIEADT 191 (345)
T ss_dssp -C---------------CC-----------------------CCTTSCHHHH---------------------HHHHHHH
T ss_pred -c---------ccccc-cc-----------------------chhhhhhhhh---------------------hhHHHHH
Confidence 0 00000 00 0112222211 2359999
Q ss_pred HHHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHhhCcC
Q 005176 179 YCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGRE 258 (710)
Q Consensus 179 F~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltLFaRE 258 (710)
||||.+||... .++|.. +++++...+..+..||+.+||+||.||.++||+|.+|+++||+|||+|+
T Consensus 192 F~~f~~lm~~~------~~~y~~--------~~~~i~~~~~~l~~ll~~~dP~L~~hL~~~~i~~~~f~~~W~~~lF~~~ 257 (345)
T 2qfz_A 192 YWCMSKLLDGI------QDNYTF--------AQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMRE 257 (345)
T ss_dssp HHHHHHHHHTS------GGGSST--------TCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHcc------cccccc--------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhHHHHHHHHHHccc
Confidence 99999999985 467764 4789999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCchhHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHhcCCCC--
Q 005176 259 FSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVN-- 336 (710)
Q Consensus 259 FpLe~vLrIWD~ifa~g~~~~~~~~e~~~~~~F~I~~s~r~~fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~nfP~~-- 336 (710)
||+++++||||.||++|... . .|++++|+|||+.+|+.||...++++++++|+++|..
T Consensus 258 ~p~~~~lrlWD~~l~~g~~~-------------~-------~~~~~v~~AiL~~~~~~ll~~~d~~~il~~L~~~p~~~~ 317 (345)
T 2qfz_A 258 VPLRCTIRLWDTYQSEPDGF-------------S-------HFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHW 317 (345)
T ss_dssp SCHHHHHHHHHHHTTSTTTT-------------T-------THHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTSCSCTTC
T ss_pred CCHHHHHHHHHHHHhCCCCh-------------h-------HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHcCCCcCC
Confidence 99999999999999998621 1 3788999999999999999877789999999999985
Q ss_pred --CCHHHHHHHHHHHHHHHhhcC
Q 005176 337 --INLKKIIGKTKSLQALALDAN 357 (710)
Q Consensus 337 --iDv~~LI~kA~~Lq~~~~~~~ 357 (710)
.|++.||++|..|+..+..++
T Consensus 318 ~~~di~~ll~~A~~l~~~~~~~~ 340 (345)
T 2qfz_A 318 DDEDISLLLAEAYRLKFAFADAP 340 (345)
T ss_dssp CHHHHHHHHHHHHHHHHHC----
T ss_pred chhHHHHHHHHHHHHHHHHHhhH
Confidence 489999999999999876544
No 3
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=354.38 Aligned_cols=201 Identities=20% Similarity=0.335 Sum_probs=184.0
Q ss_pred hHHHHHHHHhhchhCCCCccCCCCh-hHHHHHHHHHHHHHHhCCCCcccCChhHHHHHHHHHhhhhhhhhhhhccccccc
Q 005176 20 AELEKMVDQDLSRLYPEHGSYFQTP-GCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDH 98 (710)
Q Consensus 20 ~ElekqIdkDL~RTfpe~~~~Fq~~-~~q~~LrRIL~ayal~~PevGY~QGMneIaApLLyVl~~D~~~l~ev~~~yed~ 98 (710)
.+..++|++||.||||++ .+|+.. ..++.|+|||.+||.+||++|||||||+|+|+||+++.
T Consensus 107 ~~~~~~I~~Dv~RT~p~~-~~F~~~~~~~~~L~rIL~aya~~~p~vgY~QGm~~iaa~lLl~~~---------------- 169 (334)
T 2qq8_A 107 EASLELIKLDISRTFPNL-CIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLD---------------- 169 (334)
T ss_dssp CCHHHHHHHHHHTSSGGG-CSSSTTSTTHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHSC----------------
T ss_pred hhHHHHHHHHHhhcCCCc-hhhcCCCchHHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHhcCC----------------
Confidence 567799999999999999 899876 47999999999999999999999999999999987641
Q ss_pred cccccCCCccccCccccccccccccccchhccccCCCCccccccCCCChhhHHHHhhccccccccchhhcccccccHHHH
Q 005176 99 FTDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDA 178 (710)
Q Consensus 99 f~d~fDg~~~~e~d~~y~~~~~~~~~~~e~e~~~~g~~~~i~sldeldpe~~~i~~~~d~yg~egelg~vLs~k~~EaDA 178 (710)
|++|
T Consensus 170 ----------------------------------------------------------------------------E~~a 173 (334)
T 2qq8_A 170 ----------------------------------------------------------------------------TADA 173 (334)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 7899
Q ss_pred HHHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHhhCcC
Q 005176 179 YCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGRE 258 (710)
Q Consensus 179 F~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltLFaRE 258 (710)
||||.+||.... +.+||.. +++++...+..+..||+.++|+||.||.++||+|.+|+++||+|||+++
T Consensus 174 F~~~~~l~~~~~----~~~~~~~--------~~~~~~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~W~ltlF~~~ 241 (334)
T 2qq8_A 174 FIAFSNLLNKPC----QMAFFRV--------DHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKS 241 (334)
T ss_dssp HHHHHHHHTSHH----HHHHHSS--------CCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHHTTTTTT
T ss_pred HHHHHHHHHhhh----HHhccCC--------ChHHHHHHHHHHHHHHHHHCHHHHHHHHHcCCCccchHHHHHHHHhccc
Confidence 999999998742 3568864 4678888899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCchhHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHhcCCCCCC
Q 005176 259 FSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNIN 338 (710)
Q Consensus 259 FpLe~vLrIWD~ifa~g~~~~~~~~e~~~~~~F~I~~s~r~~fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~nfP~~iD 338 (710)
||++.++||||.||++|. .+++++|+|||...|+.||+.+ .++++++|+++|..+|
T Consensus 242 lp~~~~lriWD~~l~eg~-----------------------~~l~~valaiL~~~~~~Ll~~d-~~~il~~L~~lp~~~d 297 (334)
T 2qq8_A 242 LPLDLACRIWDVFCRDGE-----------------------EFLFRTALGILKLFEDILTKMD-FIHMAQFLTRLPEDLP 297 (334)
T ss_dssp SCHHHHHHHHHHHHHHCH-----------------------HHHHHHHHHHHHHTHHHHHTCC-HHHHHHHHHSCCTTCC
T ss_pred CCHHHHHHHHHHHHHcCC-----------------------HHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHhCCCcCC
Confidence 999999999999999985 5899999999999999999987 5899999999999999
Q ss_pred HHHHHHHHHHH
Q 005176 339 LKKIIGKTKSL 349 (710)
Q Consensus 339 v~~LI~kA~~L 349 (710)
++.|+.+|..|
T Consensus 298 ~~~l~~~a~~l 308 (334)
T 2qq8_A 298 AEELFASIATI 308 (334)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHc
Confidence 99999998876
No 4
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=100.00 E-value=3.2e-40 Score=342.15 Aligned_cols=201 Identities=24% Similarity=0.384 Sum_probs=183.0
Q ss_pred HHHHHHHhhchhCCCCccCCCCh--hHHHHHHHHHHHHHHhCCCCcccCChhHHHHHHHHHhhhhhhhhhhhcccccccc
Q 005176 22 LEKMVDQDLSRLYPEHGSYFQTP--GCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHF 99 (710)
Q Consensus 22 lekqIdkDL~RTfpe~~~~Fq~~--~~q~~LrRIL~ayal~~PevGY~QGMneIaApLLyVl~~D~~~l~ev~~~yed~f 99 (710)
..++|++||.||+|++ .+|+.+ ..+..|+|||.+||.+||++|||||||+|+|+||+++.
T Consensus 103 ~~~~I~~Dv~Rt~~~~-~~f~~~~~~~~~~L~~IL~ay~~~~p~igY~QGm~~i~a~ll~~~~----------------- 164 (331)
T 3qye_A 103 QQHAILIDLGRTFPTH-PYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMS----------------- 164 (331)
T ss_dssp THHHHHHHHTTSSTTS-TTTCSTTCHHHHHHHHHHHHHHHHCTTTSSCTTHHHHHHHHHTTSC-----------------
T ss_pred chhHHHHhhcccCCCc-hhhcCCCcccHHHHHHHHHHHHHHCCCccccccHHHHHHHHHHHhh-----------------
Confidence 4689999999999999 899876 68999999999999999999999999999999987641
Q ss_pred ccccCCCccccCccccccccccccccchhccccCCCCccccccCCCChhhHHHHhhccccccccchhhcccccccHHHHH
Q 005176 100 TDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDAY 179 (710)
Q Consensus 100 ~d~fDg~~~~e~d~~y~~~~~~~~~~~e~e~~~~g~~~~i~sldeldpe~~~i~~~~d~yg~egelg~vLs~k~~EaDAF 179 (710)
|++||
T Consensus 165 ---------------------------------------------------------------------------E~~aF 169 (331)
T 3qye_A 165 ---------------------------------------------------------------------------EEEAF 169 (331)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 78899
Q ss_pred HHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHhhCcCC
Q 005176 180 CMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREF 259 (710)
Q Consensus 180 ~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltLFaREF 259 (710)
|||..||... .+.++|.+ +++++...+..+..||+.+||+||.||.++|++|.+|+++||+|+|+++|
T Consensus 170 ~~l~~l~~~~----~~~~~~~~--------~~~~~~~~~~~l~~ll~~~~p~L~~hL~~~~i~~~~~~~~W~l~lF~~~l 237 (331)
T 3qye_A 170 KMLKFLMFDM----GLRKQYRP--------DMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQF 237 (331)
T ss_dssp HHHHHHHTTT----CGGGGGST--------TCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCGGGTSHHHHHSTTTTTS
T ss_pred HHHHHHHHhc----CchhcCCC--------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhhhhC
Confidence 9999999874 36788876 57899999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCchhHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHhcCCCCC--
Q 005176 260 SLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNI-- 337 (710)
Q Consensus 260 pLe~vLrIWD~ifa~g~~~~~~~~e~~~~~~F~I~~s~r~~fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~nfP~~i-- 337 (710)
|++.++||||.||++|. .+++++|+|||...|+.||+.+++++++++|+++++.+
T Consensus 238 p~~~~lrlwD~~l~~g~-----------------------~~l~~valaiL~~~~~~ll~~~~~~~il~~l~~~~p~~~~ 294 (331)
T 3qye_A 238 PLGFVARVFDMIFLQGT-----------------------EVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGL 294 (331)
T ss_dssp CHHHHHHHHHHHHHHCT-----------------------THHHHHHHHHHHHTHHHHHTCCSHHHHHHHHHHTTTCCCH
T ss_pred CHHHHHHHHHHHHHCCc-----------------------HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCCCH
Confidence 99999999999999986 47899999999999999999877899999999855544
Q ss_pred -CHHHHHHHHHHHH
Q 005176 338 -NLKKIIGKTKSLQ 350 (710)
Q Consensus 338 -Dv~~LI~kA~~Lq 350 (710)
|++.||++|..++
T Consensus 295 ~di~~li~~A~~l~ 308 (331)
T 3qye_A 295 VQMEKTINQVFEMD 308 (331)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCC
Confidence 8899999997663
No 5
>4hl4_A TBC1 domain family member 20; rabgap, RAB1B, hydrolase activator, catalytic domain, F GTPase-activating proteins, RAB GTP-binding protein, GTP HY; 2.20A {Homo sapiens} PDB: 4hlq_A*
Probab=100.00 E-value=4.2e-40 Score=337.24 Aligned_cols=204 Identities=21% Similarity=0.327 Sum_probs=180.2
Q ss_pred hHHHHHHHHhhchhCCCCccCCCCh----hHHHHHHHHHHHHHHhCCCCcccCChhHHHHHHHHHhhhhhhhhhhhcccc
Q 005176 20 AELEKMVDQDLSRLYPEHGSYFQTP----GCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEH 95 (710)
Q Consensus 20 ~ElekqIdkDL~RTfpe~~~~Fq~~----~~q~~LrRIL~ayal~~PevGY~QGMneIaApLLyVl~~D~~~l~ev~~~y 95 (710)
.+..+||++||.||+|.+ ..|..+ ..++.|+|||.+|+.+||++|||||||+|+|+||+++.
T Consensus 80 ~~~~~qI~~Dv~RT~~~~-~~~~~~~~~~~~~~~L~~iL~ay~~~~p~vgY~QGm~~iaa~lLl~~~------------- 145 (292)
T 4hl4_A 80 SKDYQQVLLDVRRSLRRF-PPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVG------------- 145 (292)
T ss_dssp CTTHHHHHHHHHTTGGGS-CTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCTTHHHHHHHHHHHHC-------------
T ss_pred chhHHHHHHhhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCeeccHHHHHHHHHHHcC-------------
Confidence 456799999999999998 777543 46789999999999999999999999999999998751
Q ss_pred ccccccccCCCccccCccccccccccccccchhccccCCCCccccccCCCChhhHHHHhhccccccccchhhcccccccH
Q 005176 96 EDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFME 175 (710)
Q Consensus 96 ed~f~d~fDg~~~~e~d~~y~~~~~~~~~~~e~e~~~~g~~~~i~sldeldpe~~~i~~~~d~yg~egelg~vLs~k~~E 175 (710)
|
T Consensus 146 -------------------------------------------------------------------------------e 146 (292)
T 4hl4_A 146 -------------------------------------------------------------------------------E 146 (292)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred -------------------------------------------------------------------------------H
Confidence 7
Q ss_pred HHHHHHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHhh
Q 005176 176 HDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLF 255 (710)
Q Consensus 176 aDAF~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltLF 255 (710)
++|||||..||... +.+||.+ +++++...+..+..+|+.+||+||+||.+.|+. .+|+++||+|+|
T Consensus 147 ~~aF~~l~~l~~~~-----l~~~~~~--------~~~~~~~~~~~l~~ll~~~~P~L~~hL~~~~i~-~~~~~~W~ltlF 212 (292)
T 4hl4_A 147 RLATSLVEKLSTHH-----LRDFMDP--------TMDNTKHILNYLMPIIDQVNPELHDFMQSAEVG-TIFALSWLITWF 212 (292)
T ss_dssp HHHHHHHHHHHHTT-----TTGGGCS--------SSCTTTGGGGGHHHHHHHHCHHHHHHHC-CCCC-SGGGHHHHHTTT
T ss_pred HHHHHHHHHHHHHH-----HHHhccc--------chHHHHHHHHHHHHHHHHHCHHHHHHHHHcCCC-cchHHHHHHHHH
Confidence 89999999999953 5688875 456677778899999999999999999999995 699999999999
Q ss_pred CcCCC-hHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCchhHHHHHHHHHHHHHhHHHHhcCC-CHHHHHHHHhcC
Q 005176 256 GREFS-LGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATE-NATTCLQRLLNF 333 (710)
Q Consensus 256 aREFp-Le~vLrIWD~ifa~g~~~~~~~~e~~~~~~F~I~~s~r~~fI~~vavAILl~lRs~LL~~e-~~~e~Lq~L~nf 333 (710)
+++++ ++.++||||.+|++|. .+++++|+|||+..|+.||+.+ +.+.++++|+++
T Consensus 213 ~~~l~~~~~~~rlWD~~l~~g~-----------------------~~~~~v~~ail~~~~~~Ll~~~~d~~~l~~~l~~l 269 (292)
T 4hl4_A 213 GHVLSDFRHVVRLYDFFLACHP-----------------------LMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQI 269 (292)
T ss_dssp TTTSCCHHHHHHHHHHHHHSCT-----------------------THHHHHHHHHHHHTHHHHHTSCCSTTHHHHHHHSC
T ss_pred hhhcCcHHHHHHHHHHHHHcCC-----------------------cHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 99996 9999999999999986 3788999999999999999973 457888899999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 005176 334 PVNINLKKIIGKTKSLQALA 353 (710)
Q Consensus 334 P~~iDv~~LI~kA~~Lq~~~ 353 (710)
|..+|++.||++|..|+..+
T Consensus 270 p~~~d~~~li~~A~~l~~~~ 289 (292)
T 4hl4_A 270 PQDLPYETLISRAGDLFVQF 289 (292)
T ss_dssp CSSCCHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHHC
Confidence 99999999999999998753
No 6
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=337.99 Aligned_cols=200 Identities=22% Similarity=0.419 Sum_probs=181.8
Q ss_pred HHHHHHHHhhchhCCCCccCCCCh--hHHHHHHHHHHHHHHhCCCCcccCChhHHHHHHHHHhhhhhhhhhhhccccccc
Q 005176 21 ELEKMVDQDLSRLYPEHGSYFQTP--GCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDH 98 (710)
Q Consensus 21 ElekqIdkDL~RTfpe~~~~Fq~~--~~q~~LrRIL~ayal~~PevGY~QGMneIaApLLyVl~~D~~~l~ev~~~yed~ 98 (710)
...++|++||.||+|++ .+|+.+ .+++.|+|||.+||.+||++|||||||+|+|+||+++.
T Consensus 68 ~~~~~I~~Dv~Rt~p~~-~~f~~~~~~~~~~L~~IL~ay~~~~p~igY~QGm~~iaa~lL~~~~---------------- 130 (310)
T 3hzj_A 68 AQESVITRDIHRTFPAH-DYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHMP---------------- 130 (310)
T ss_dssp TTHHHHHHHHTTSSTTS-TTTSSTTSHHHHHHHHHHHHHHHHCTTTCSCTTHHHHHHHHHHHSC----------------
T ss_pred CcHHHHHHHHHhhCCCc-hhhcCCCchhHHHHHHHHHHHHHHCCCCCccCCHHHHHHHHHHhCC----------------
Confidence 34689999999999999 899876 58999999999999999999999999999999998851
Q ss_pred cccccCCCccccCccccccccccccccchhccccCCCCccccccCCCChhhHHHHhhccccccccchhhcccccccHHHH
Q 005176 99 FTDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDA 178 (710)
Q Consensus 99 f~d~fDg~~~~e~d~~y~~~~~~~~~~~e~e~~~~g~~~~i~sldeldpe~~~i~~~~d~yg~egelg~vLs~k~~EaDA 178 (710)
|++|
T Consensus 131 ----------------------------------------------------------------------------e~~a 134 (310)
T 3hzj_A 131 ----------------------------------------------------------------------------EEQA 134 (310)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 7889
Q ss_pred HHHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHhhCcC
Q 005176 179 YCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGRE 258 (710)
Q Consensus 179 F~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltLFaRE 258 (710)
||||.+||... .++++|.+ +++++...+..+..||+.+||+||.||.++|++|.+|+++||+|||+++
T Consensus 135 F~~l~~l~~~~----~~~~~~~~--------~~~~~~~~~~~l~~ll~~~~p~L~~hL~~~~i~~~~~~~~W~ltlF~~~ 202 (310)
T 3hzj_A 135 FCVLVKIMYDY----GLRDLYRN--------NFEDLHCKFYQLERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAK 202 (310)
T ss_dssp HHHHHHHHHTS----CGGGGTHH--------HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGTSHHHHHHTTTTT
T ss_pred HHHHHHHHhcc----cccccccc--------cHHHHHHHHHHHHHHHHHhChHHHHHHHHcCCChHHHHHHHHHHHHhcc
Confidence 99999999873 37788875 5789999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCchhHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHh-cCCC--
Q 005176 259 FSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLL-NFPV-- 335 (710)
Q Consensus 259 FpLe~vLrIWD~ifa~g~~~~~~~~e~~~~~~F~I~~s~r~~fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~-nfP~-- 335 (710)
||++.++||||.||++|. .+++++|+|||...|+.||+.+ .++++++|+ ++|.
T Consensus 203 lp~~~~~riwD~~l~~g~-----------------------~~l~~v~lail~~~~~~Ll~~d-~~~~l~~l~~~lp~~~ 258 (310)
T 3hzj_A 203 FPLCMVFHIIDLLLCEGL-----------------------NIIFHVALALLKTSKEDLLQAD-FEGALKFFRVQLPKRY 258 (310)
T ss_dssp SCHHHHHHHHHHHHHHCT-----------------------THHHHHHHHHHHHTHHHHHTCC-HHHHHHHHHTHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCc-----------------------HHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHhCcccc
Confidence 999999999999999986 4789999999999999999985 689999997 5564
Q ss_pred --CCCHHHHHHHHHHH
Q 005176 336 --NINLKKIIGKTKSL 349 (710)
Q Consensus 336 --~iDv~~LI~kA~~L 349 (710)
..|++.||++|..+
T Consensus 259 ~~~~d~~~ll~~A~~l 274 (310)
T 3hzj_A 259 RAEENARRLMEQACNI 274 (310)
T ss_dssp CSHHHHHHHHHHHHHS
T ss_pred cccccHHHHHHHHHhc
Confidence 36899999999877
No 7
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=247.69 Aligned_cols=143 Identities=18% Similarity=0.275 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHhcccCCCcccccccCCCCCCccCCcHHHHHHHHHHHHHHHHhchhhhhhhHhhCCCcchhhhHHHHHh
Q 005176 175 EHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 254 (710)
Q Consensus 175 EaDAF~~F~~LM~~~~g~~~~~dfF~~s~~~gs~tgLp~i~~~~~~L~~LL~~~DP~L~~HL~elgIep~lFalrWfltL 254 (710)
|+||||||.+||+.. .++|.+ ++|++... +++||+.+||+||.||.++|+.|.+|+.|||+|+
T Consensus 149 E~dAFW~f~~Lm~~l------~~~f~~--------~~~gl~~~---l~~LL~~~dP~L~~HL~~~~i~~~~~~~rWfl~l 211 (294)
T 3qwl_A 149 SVDCYWITRRFVNQL------NTKYRD--------SLPQLPKA---FEQYLNLEDGRLLTHLRMCSAAPKLPYDLWFKRC 211 (294)
T ss_dssp HHHHHHHHHHHHHHH------HTTTTT--------TGGGHHHH---HHHHHHHHCHHHHHHHHHTTCGGGSCHHHHHTST
T ss_pred HHHHHHHHHHHHHHH------HHhhCC--------ChhHHHHH---HHHHHHHHHHHHHHHHHHCCCCchhHHHHHHHHH
Confidence 899999999999984 478875 47787754 5899999999999999999999888777999999
Q ss_pred hCcCCChHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCchhHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHhcCC
Q 005176 255 FGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 334 (710)
Q Consensus 255 FaREFpLe~vLrIWD~ifa~g~~~~~~~~e~~~~~~F~I~~s~r~~fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~nfP 334 (710)
|+++||+++++||||.+|+.+. .|+++||+|||..+|+.||+.++.++++++|+++|
T Consensus 212 F~~~~p~~~vlRlWD~~~~~~~-----------------------~~l~~valAiL~~~r~~Ll~~~~~~~il~~Lq~lp 268 (294)
T 3qwl_A 212 FAGCLPESSLQRVWDKVVSGSC-----------------------KILVFVAVEILLTFKIKVMALNSAEKITKFLENIP 268 (294)
T ss_dssp TTTTSCHHHHHHHHHHHHTTCS-----------------------THHHHHHHHHHHHTHHHHHHCCSHHHHHHHHTTCC
T ss_pred hccCCCHHHHHHHHHHHHhCCc-----------------------hHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHcCC
Confidence 9999999999999999999664 47899999999999999999998889999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCC
Q 005176 335 VNINLKKIIGKTKSLQALALDANL 358 (710)
Q Consensus 335 ~~iDv~~LI~kA~~Lq~~~~~~~~ 358 (710)
+ .|++.||++|..|+..+..++.
T Consensus 269 ~-~di~~ll~~A~~l~~~~~~~~~ 291 (294)
T 3qwl_A 269 Q-DSSDAIVSKAIDLWHKHCGTPV 291 (294)
T ss_dssp S-TTHHHHHHHHHHHHHHHHCCCC
T ss_pred c-ccHHHHHHHHHHHHHHcCCCCc
Confidence 5 7899999999999999876543
No 8
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=13.79 E-value=1.2e+02 Score=26.44 Aligned_cols=48 Identities=10% Similarity=0.161 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhHHHHhcCCCHHHHHHHHhcCCCC---CCHHHHHHHHHHH
Q 005176 301 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVN---INLKKIIGKTKSL 349 (710)
Q Consensus 301 fI~~vavAILl~lRs~LL~~e~~~e~Lq~L~nfP~~---iDv~~LI~kA~~L 349 (710)
-++-+|+|+....|... +...+...+.+|..+|+. +|+..|+..+..+
T Consensus 41 GLIq~Ava~~h~~~gn~-a~~ll~~a~~~L~~~~~~~~gidv~~L~~~~~~~ 91 (94)
T 2cwy_A 41 GVILLAAALHQRRLGRP-GLRNLRKAEARLEGLPCPLMGLDWRSLLQEARRR 91 (94)
T ss_dssp HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHTTCCSSBTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcH-HHHHHHHHHHHHHhCCCccCCcCHHHHHHHHHHH
Confidence 35668889888777776 544456778889999864 9999999877654
No 9
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens}
Probab=9.23 E-value=2.3e+02 Score=25.39 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhchhhhhhhHhhCC
Q 005176 216 EASSAMYHLLSVADSSLHSHLVELGV 241 (710)
Q Consensus 216 ~~~~~L~~LL~~~DP~L~~HL~elgI 241 (710)
.++..|...|+..+|-|+..|.+.|.
T Consensus 79 ~A~~~F~~~L~e~dp~L~~~L~~~~~ 104 (107)
T 3kat_A 79 KCKDGLYQALKETHPHLIMELWEKGS 104 (107)
T ss_dssp THHHHHHHHHHHHCHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCHHHHHHHHhhcc
Confidence 35678999999999999999977653
No 10
>2js3_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural G PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris}
Probab=8.56 E-value=90 Score=27.28 Aligned_cols=12 Identities=42% Similarity=0.362 Sum_probs=9.9
Q ss_pred CcccCChhHHHH
Q 005176 64 FGYRQGMHELLA 75 (710)
Q Consensus 64 vGY~QGMneIaA 75 (710)
--|+|||.++++
T Consensus 16 nlyfqgM~~~a~ 27 (96)
T 2js3_A 16 NLYFQGMTDTAA 27 (96)
T ss_dssp CBTTBSTTTHHH
T ss_pred ceeeccccccCH
Confidence 459999998876
Done!