Query 005177
Match_columns 710
No_of_seqs 656 out of 5172
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 17:44:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005177hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.2E-51 1.1E-55 425.2 14.7 245 450-706 17-288 (299)
2 4gt4_A Tyrosine-protein kinase 100.0 6.1E-51 2.1E-55 424.9 16.9 245 450-706 30-305 (308)
3 3rgz_A Protein brassinosteroid 100.0 1.9E-50 6.5E-55 476.5 23.1 372 19-406 5-435 (768)
4 4aoj_A High affinity nerve gro 100.0 5.1E-51 1.8E-55 429.5 16.0 246 450-707 45-319 (329)
5 3omv_A RAF proto-oncogene seri 100.0 1.3E-50 4.6E-55 420.6 16.9 247 450-706 40-299 (307)
6 3hmm_A TGF-beta receptor type- 100.0 3.1E-50 1.1E-54 420.4 16.7 254 450-706 7-296 (303)
7 4fih_A Serine/threonine-protei 100.0 1E-48 3.5E-53 411.5 14.6 242 450-701 78-324 (346)
8 3fpq_A Serine/threonine-protei 100.0 1.8E-48 6.3E-53 401.6 15.2 242 451-701 31-283 (290)
9 4eco_A Uncharacterized protein 100.0 6E-48 2.1E-52 445.2 20.7 363 24-406 28-529 (636)
10 4g3f_A NF-kappa-beta-inducing 100.0 3.4E-48 1.1E-52 406.4 13.9 241 450-704 62-313 (336)
11 4b9d_A Serine/threonine-protei 100.0 1.9E-48 6.4E-53 410.1 11.7 242 445-700 25-276 (350)
12 4ecn_A Leucine-rich repeat pro 100.0 9.1E-47 3.1E-51 443.3 24.3 362 23-403 266-767 (876)
13 4ase_A Vascular endothelial gr 100.0 4.2E-48 1.4E-52 410.6 11.3 245 450-705 68-345 (353)
14 4fie_A Serine/threonine-protei 100.0 1.4E-47 4.7E-52 412.8 14.9 242 450-701 155-401 (423)
15 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.8E-47 9.7E-52 394.6 11.8 240 445-699 33-283 (311)
16 3hyh_A Carbon catabolite-derep 100.0 1.2E-46 4.1E-51 384.6 16.2 242 444-701 13-263 (275)
17 3ubd_A Ribosomal protein S6 ki 100.0 6.7E-47 2.3E-51 391.8 8.9 241 445-700 25-281 (304)
18 4g31_A Eukaryotic translation 100.0 9.5E-46 3.3E-50 384.6 14.0 241 445-701 6-280 (299)
19 3rgz_A Protein brassinosteroid 100.0 7.3E-45 2.5E-49 428.9 21.6 329 76-406 295-721 (768)
20 1ogq_A PGIP-2, polygalacturona 100.0 3.6E-44 1.2E-48 377.5 16.8 297 22-356 2-307 (313)
21 4b99_A Mitogen-activated prote 100.0 2.8E-42 9.4E-47 372.3 18.1 248 450-701 58-345 (398)
22 4f9c_A Cell division cycle 7-r 100.0 3.4E-42 1.1E-46 367.6 15.6 196 442-644 19-251 (361)
23 3v5w_A G-protein coupled recep 100.0 7E-42 2.4E-46 384.3 14.3 245 444-700 189-449 (689)
24 3v47_A TOLL-like receptor 5B a 100.0 2E-40 6.7E-45 367.8 25.4 345 61-407 6-413 (455)
25 3uto_A Twitchin; kinase, muscl 100.0 6.8E-42 2.3E-46 387.1 13.3 249 442-701 155-411 (573)
26 2qkw_B Protein kinase; three-h 100.0 3.6E-40 1.2E-44 348.4 22.0 259 441-706 36-314 (321)
27 3uim_A Brassinosteroid insensi 100.0 1.8E-40 6.3E-45 351.3 19.0 261 442-706 28-310 (326)
28 3soc_A Activin receptor type-2 100.0 1.1E-40 3.6E-45 352.6 15.1 257 450-707 28-318 (322)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.7E-40 2.3E-44 336.8 15.5 249 450-710 12-267 (268)
30 3s95_A LIMK-1, LIM domain kina 100.0 2.2E-39 7.5E-44 340.5 19.7 247 450-706 14-281 (310)
31 3fxz_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 341.4 15.9 247 443-701 19-270 (297)
32 4hcu_A Tyrosine-protein kinase 100.0 4.8E-40 1.6E-44 338.2 13.6 248 450-709 14-268 (269)
33 4eco_A Uncharacterized protein 100.0 2.5E-39 8.5E-44 373.3 20.7 323 75-407 206-583 (636)
34 2psq_A Fibroblast growth facto 100.0 2.9E-39 1E-43 348.1 18.6 244 450-705 85-362 (370)
35 3p86_A Serine/threonine-protei 100.0 1.1E-39 3.9E-44 342.5 14.3 245 450-707 41-298 (309)
36 3q4u_A Activin receptor type-1 100.0 2.2E-39 7.6E-44 338.7 16.2 252 444-705 8-300 (301)
37 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-38 1.1E-42 362.9 27.0 329 75-406 32-514 (606)
38 1tki_A Titin; serine kinase, m 100.0 8.1E-40 2.8E-44 345.5 11.8 247 444-701 5-258 (321)
39 1qcf_A Haematopoetic cell kina 100.0 4.6E-39 1.6E-43 356.2 18.1 245 450-707 192-444 (454)
40 3kul_A Ephrin type-A receptor 100.0 2.9E-39 1E-43 342.0 15.6 245 450-706 53-312 (325)
41 3fe3_A MAP/microtubule affinit 100.0 2.5E-39 8.6E-44 342.5 15.1 242 445-701 16-265 (328)
42 2qol_A Ephrin receptor; recept 100.0 2.5E-39 8.7E-44 348.9 15.3 248 445-706 46-308 (373)
43 3zgw_A Maternal embryonic leuc 100.0 1.7E-39 5.8E-44 346.0 13.7 247 440-701 6-261 (347)
44 3cbl_A C-FES, proto-oncogene t 100.0 7.8E-40 2.7E-44 353.7 10.5 246 450-707 118-374 (377)
45 2c30_A Serine/threonine-protei 100.0 5.8E-39 2E-43 339.1 16.4 242 450-701 49-295 (321)
46 2yab_A Death-associated protei 100.0 3.7E-39 1.3E-43 345.4 14.9 249 441-700 9-272 (361)
47 3gen_A Tyrosine-protein kinase 100.0 5.8E-39 2E-43 332.6 15.4 245 450-706 28-279 (283)
48 1opk_A P150, C-ABL, proto-onco 100.0 6.3E-39 2.2E-43 358.7 15.9 246 450-707 224-478 (495)
49 2nru_A Interleukin-1 receptor- 100.0 5.4E-38 1.9E-42 329.3 21.8 258 440-707 21-306 (307)
50 2z81_A CD282 antigen, TOLL-lik 100.0 8.1E-38 2.8E-42 355.2 24.0 338 62-406 3-514 (549)
51 2y0a_A Death-associated protei 100.0 8.8E-39 3E-43 338.4 14.9 250 441-701 8-272 (326)
52 1k9a_A Carboxyl-terminal SRC k 100.0 1.9E-38 6.4E-43 350.8 18.2 242 450-706 197-444 (450)
53 3ugc_A Tyrosine-protein kinase 100.0 5.1E-39 1.7E-43 335.2 12.5 252 450-707 14-291 (295)
54 2x4f_A Myosin light chain kina 100.0 1.7E-38 5.7E-43 342.4 16.7 242 450-700 93-342 (373)
55 3dtc_A Mitogen-activated prote 100.0 6.9E-39 2.4E-43 329.7 12.3 247 450-705 11-271 (271)
56 4eqm_A Protein kinase; transfe 100.0 9.6E-39 3.3E-43 333.1 13.4 250 450-707 15-275 (294)
57 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-38 4.6E-43 342.6 14.9 245 450-706 75-344 (367)
58 3soa_A Calcium/calmodulin-depe 100.0 2.8E-38 9.6E-43 347.5 17.5 250 441-701 8-268 (444)
59 3niz_A Rhodanese family protei 100.0 3.2E-38 1.1E-42 331.9 17.2 255 441-701 18-301 (311)
60 1o6l_A RAC-beta serine/threoni 100.0 2.3E-38 7.9E-43 336.2 15.9 242 445-701 6-261 (337)
61 4ecn_A Leucine-rich repeat pro 100.0 1.4E-37 4.6E-42 365.5 24.0 321 75-407 448-823 (876)
62 3vhe_A Vascular endothelial gr 100.0 9.2E-39 3.1E-43 342.9 12.9 250 444-706 22-354 (359)
63 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-38 5.7E-43 351.4 15.4 245 450-707 188-440 (452)
64 3mdy_A Bone morphogenetic prot 100.0 4.1E-38 1.4E-42 334.6 17.6 262 441-707 34-331 (337)
65 3t9t_A Tyrosine-protein kinase 100.0 1.5E-38 5.3E-43 326.3 13.9 247 450-708 12-265 (267)
66 4euu_A Serine/threonine-protei 100.0 8.5E-38 2.9E-42 329.8 19.8 254 450-706 13-308 (319)
67 2bdw_A Hypothetical protein K1 100.0 2.1E-38 7.2E-43 340.3 15.1 249 442-701 27-285 (362)
68 3qd2_B Eukaryotic translation 100.0 2.6E-38 8.9E-43 335.2 15.5 243 443-701 5-326 (332)
69 3poz_A Epidermal growth factor 100.0 1.9E-38 6.5E-43 336.1 14.4 244 450-707 19-278 (327)
70 3lb7_A RAF proto-oncogene seri 100.0 3.3E-38 1.1E-42 331.1 16.0 251 445-707 37-300 (307)
71 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-38 5.1E-43 339.9 13.5 248 443-701 52-306 (349)
72 3c0i_A Peripheral plasma membr 100.0 2E-38 6.9E-43 339.2 14.5 244 445-700 25-286 (351)
73 1luf_A Muscle-specific tyrosin 100.0 3.4E-38 1.2E-42 336.2 15.9 250 444-707 47-335 (343)
74 2id5_A Lingo-1, leucine rich r 100.0 4.5E-37 1.6E-41 342.9 25.6 307 100-406 31-337 (477)
75 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-38 1.1E-42 334.8 15.4 238 450-701 13-259 (336)
76 3tt0_A Basic fibroblast growth 100.0 3.9E-38 1.3E-42 341.1 16.5 245 450-706 73-351 (382)
77 3uc3_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 338.9 15.4 245 450-701 24-275 (361)
78 3gxj_A TGF-beta receptor type- 100.0 1.9E-39 6.6E-44 339.4 5.7 255 445-708 4-298 (303)
79 3v47_A TOLL-like receptor 5B a 100.0 1.2E-37 4.1E-42 345.3 20.1 320 81-406 16-388 (455)
80 2ivs_A Proto-oncogene tyrosine 100.0 3.1E-38 1.1E-42 332.1 14.6 245 450-706 27-310 (314)
81 3g2f_A Bone morphogenetic prot 100.0 3.3E-38 1.1E-42 335.4 14.5 255 450-705 17-316 (336)
82 3tki_A Serine/threonine-protei 100.0 2.3E-38 8E-43 334.7 13.3 246 444-701 7-262 (323)
83 2eva_A TAK1 kinase - TAB1 chim 100.0 5.8E-38 2E-42 329.3 16.1 245 450-706 12-262 (307)
84 3kn6_A Ribosomal protein S6 ki 100.0 2.2E-38 7.5E-43 335.2 13.0 246 451-701 16-271 (325)
85 3t6q_A CD180 antigen; protein- 100.0 1.7E-36 5.9E-41 348.5 29.4 328 76-406 34-417 (606)
86 2pmi_A Negative RE, cyclin-dep 100.0 3.2E-37 1.1E-41 325.1 21.4 251 445-701 6-294 (317)
87 1kob_A Twitchin; kinase, intra 100.0 3.5E-38 1.2E-42 341.0 14.1 250 441-701 48-305 (387)
88 4dc2_A Protein kinase C IOTA t 100.0 4.8E-38 1.6E-42 340.0 15.0 248 444-700 52-318 (396)
89 4f0f_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 323.2 17.6 244 450-705 23-287 (287)
90 3kex_A Receptor tyrosine-prote 100.0 4.5E-38 1.5E-42 332.9 14.3 245 450-707 17-276 (325)
91 2izr_A Casein kinase I isoform 100.0 3.2E-38 1.1E-42 334.8 12.8 248 450-705 13-279 (330)
92 2zv2_A Calcium/calmodulin-depe 100.0 5E-38 1.7E-42 328.3 14.0 240 450-700 17-292 (298)
93 1fot_A TPK1 delta, CAMP-depend 100.0 8.2E-38 2.8E-42 329.4 15.4 238 450-701 10-259 (318)
94 3kfa_A Tyrosine-protein kinase 100.0 8.3E-38 2.8E-42 324.7 15.0 244 450-705 17-269 (288)
95 2z7x_B TOLL-like receptor 1, v 100.0 7.9E-37 2.7E-41 344.7 24.2 320 75-406 21-485 (520)
96 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-38 9.2E-43 337.8 11.5 242 444-700 23-280 (353)
97 1mp8_A Focal adhesion kinase 1 100.0 1E-37 3.5E-42 323.0 15.5 244 450-706 19-275 (281)
98 1qpc_A LCK kinase; alpha beta 100.0 7.9E-38 2.7E-42 323.4 14.5 243 450-705 17-267 (279)
99 4fr4_A YANK1, serine/threonine 100.0 9.8E-38 3.4E-42 336.4 15.8 245 444-700 15-271 (384)
100 3ttj_A Mitogen-activated prote 100.0 1.7E-37 5.7E-42 344.0 17.9 253 443-701 61-356 (464)
101 1rjb_A FL cytokine receptor; k 100.0 5.8E-38 2E-42 334.7 13.6 247 450-707 49-334 (344)
102 3qup_A Tyrosine-protein kinase 100.0 1.3E-37 4.3E-42 329.0 16.0 248 445-706 24-297 (323)
103 1ob3_A PFPK5, cell division co 100.0 2.1E-37 7.2E-42 321.9 17.3 247 450-701 6-281 (288)
104 3kmu_A ILK, integrin-linked ki 100.0 6.1E-38 2.1E-42 322.3 13.0 245 450-707 14-270 (271)
105 3p1a_A MYT1 kinase, membrane-a 100.0 7.9E-38 2.7E-42 328.9 13.9 240 444-701 57-305 (311)
106 1xjd_A Protein kinase C, theta 100.0 3.6E-38 1.2E-42 335.6 11.3 241 444-699 17-268 (345)
107 3hko_A Calcium/calmodulin-depe 100.0 1E-37 3.5E-42 332.8 14.8 252 439-701 21-331 (345)
108 3o0g_A Cell division protein k 100.0 2.6E-37 9.1E-42 321.8 17.4 248 450-701 6-283 (292)
109 3fdn_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 321.9 14.8 242 445-701 10-258 (279)
110 1t46_A HOMO sapiens V-KIT hard 100.0 6.5E-38 2.2E-42 329.5 12.8 246 450-706 27-306 (313)
111 3a8x_A Protein kinase C IOTA t 100.0 1.5E-37 5E-42 331.4 15.7 244 450-700 13-275 (345)
112 3c1x_A Hepatocyte growth facto 100.0 1.4E-37 4.8E-42 335.0 15.5 246 450-706 93-354 (373)
113 2a2a_A Death-associated protei 100.0 1.3E-37 4.5E-42 328.7 14.8 249 441-701 9-273 (321)
114 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-36 6.3E-41 341.7 25.1 309 79-402 4-434 (520)
115 3v8s_A RHO-associated protein 100.0 2.8E-38 9.5E-43 343.7 9.8 247 444-701 69-330 (410)
116 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-37 5.5E-42 331.6 15.4 241 445-701 42-294 (350)
117 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-37 3.6E-42 352.0 14.6 245 450-707 271-523 (535)
118 3vq2_A TLR4, TOLL-like recepto 100.0 2.5E-36 8.5E-41 347.2 26.3 325 75-403 56-535 (606)
119 2wqm_A Serine/threonine-protei 100.0 2E-37 6.7E-42 325.6 15.6 253 444-707 32-297 (310)
120 4fvq_A Tyrosine-protein kinase 100.0 7.8E-38 2.7E-42 325.0 12.2 243 450-707 12-275 (289)
121 4e5w_A Tyrosine-protein kinase 100.0 2E-37 7E-42 324.0 15.4 250 450-705 25-300 (302)
122 3j0a_A TOLL-like receptor 5; m 100.0 3E-36 1E-40 359.1 27.5 313 63-379 14-376 (844)
123 3dls_A PAS domain-containing s 100.0 1.4E-37 4.9E-42 330.3 14.3 240 441-701 21-275 (335)
124 2a19_B Interferon-induced, dou 100.0 9E-38 3.1E-42 323.5 12.4 244 443-708 10-275 (284)
125 2ozo_A Tyrosine-protein kinase 100.0 2.8E-37 9.7E-42 353.5 17.8 240 453-705 343-596 (613)
126 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.1E-36 1.4E-40 342.1 27.0 320 76-407 53-515 (562)
127 3cok_A Serine/threonine-protei 100.0 2.6E-37 8.8E-42 319.3 15.4 243 444-701 11-263 (278)
128 2pvf_A Fibroblast growth facto 100.0 2.4E-37 8.3E-42 328.6 15.6 244 450-705 39-316 (334)
129 2y94_A 5'-AMP-activated protei 100.0 3.3E-37 1.1E-41 341.3 17.3 239 450-701 20-267 (476)
130 1b6c_B TGF-B superfamily recep 100.0 3.1E-37 1.1E-41 328.6 16.5 259 440-707 38-336 (342)
131 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-37 4.6E-42 323.5 13.2 250 446-707 26-288 (289)
132 3is5_A Calcium-dependent prote 100.0 2.2E-37 7.5E-42 321.3 14.6 246 442-700 20-278 (285)
133 1nxk_A MAP kinase-activated pr 100.0 2.1E-37 7.1E-42 337.0 15.0 241 452-701 68-322 (400)
134 1csn_A Casein kinase-1; phosph 100.0 1.3E-37 4.5E-42 324.7 12.9 249 450-706 14-282 (298)
135 3kk8_A Calcium/calmodulin depe 100.0 2.6E-37 8.9E-42 320.2 15.0 247 444-701 6-262 (284)
136 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-37 4.7E-42 335.5 13.2 243 450-700 66-352 (371)
137 1byg_A CSK, protein (C-termina 100.0 2.8E-37 9.5E-42 319.1 14.9 245 445-706 22-272 (278)
138 3t6q_A CD180 antigen; protein- 100.0 7.2E-36 2.5E-40 343.3 28.2 246 159-405 264-516 (606)
139 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-37 7.5E-42 319.7 13.9 247 442-700 7-261 (277)
140 2id5_A Lingo-1, leucine rich r 100.0 4.8E-36 1.6E-40 334.6 25.7 314 65-380 13-335 (477)
141 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.7E-36 2.3E-40 340.4 27.4 312 78-403 34-487 (562)
142 3pls_A Macrophage-stimulating 100.0 2.6E-37 8.9E-42 322.5 14.4 245 450-705 25-285 (298)
143 3a62_A Ribosomal protein S6 ki 100.0 1.7E-37 5.7E-42 328.8 13.1 243 444-701 17-277 (327)
144 2z63_A TOLL-like receptor 4, v 100.0 4.8E-36 1.6E-40 342.1 25.9 328 76-406 29-535 (570)
145 3op5_A Serine/threonine-protei 100.0 2.1E-37 7.3E-42 333.1 13.7 250 445-705 36-327 (364)
146 3llt_A Serine/threonine kinase 100.0 2.9E-37 9.9E-42 331.5 14.7 192 444-642 35-261 (360)
147 4fl3_A Tyrosine-protein kinase 100.0 2.6E-37 8.8E-42 354.7 15.2 241 452-705 375-629 (635)
148 3ork_A Serine/threonine protei 100.0 3.6E-38 1.2E-42 331.5 7.4 248 442-700 10-273 (311)
149 4ejn_A RAC-alpha serine/threon 100.0 1.2E-37 4.1E-42 344.3 11.8 243 444-701 148-405 (446)
150 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-37 5E-42 330.9 11.9 249 442-701 20-278 (342)
151 3i6u_A CDS1, serine/threonine- 100.0 2.5E-37 8.5E-42 338.6 14.0 250 441-701 132-400 (419)
152 3g33_A Cell division protein k 100.0 3.5E-37 1.2E-41 323.4 14.6 249 444-701 9-297 (308)
153 2eue_A Carbon catabolite derep 100.0 3.3E-37 1.1E-41 318.0 14.1 241 444-700 13-262 (275)
154 1u59_A Tyrosine-protein kinase 100.0 6.4E-37 2.2E-41 318.0 16.3 241 452-705 16-270 (287)
155 1p4o_A Insulin-like growth fac 100.0 6.1E-37 2.1E-41 323.6 16.4 250 444-707 25-299 (322)
156 3lxl_A Tyrosine-protein kinase 100.0 1.7E-37 5.8E-42 328.7 12.1 253 450-707 27-303 (327)
157 4aw2_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 342.3 10.3 247 444-701 74-339 (437)
158 4eut_A Serine/threonine-protei 100.0 8.5E-37 2.9E-41 332.1 17.8 254 450-706 13-308 (396)
159 3f66_A Hepatocyte growth facto 100.0 6.4E-37 2.2E-41 319.7 15.9 246 450-706 29-290 (298)
160 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-35 5.4E-40 345.2 29.5 300 75-376 25-364 (680)
161 3lxp_A Non-receptor tyrosine-p 100.0 2.7E-37 9.4E-42 325.8 13.2 252 450-706 35-309 (318)
162 2ac3_A MAP kinase-interacting 100.0 8.5E-37 2.9E-41 321.6 16.8 246 452-701 19-296 (316)
163 3cc6_A Protein tyrosine kinase 100.0 6.6E-37 2.3E-41 316.8 15.7 244 450-706 16-272 (281)
164 1mqb_A Ephrin type-A receptor 100.0 6.5E-37 2.2E-41 325.1 16.0 245 450-706 48-308 (333)
165 1fvr_A Tyrosine-protein kinase 100.0 6E-37 2E-41 324.5 15.5 248 445-706 26-299 (327)
166 3bhy_A Death-associated protei 100.0 4.4E-37 1.5E-41 318.3 14.2 243 450-701 9-266 (283)
167 2i0e_A Protein kinase C-beta I 100.0 3E-37 1E-41 329.6 13.2 242 444-700 20-276 (353)
168 3byv_A Rhoptry kinase; malaria 100.0 1.3E-37 4.5E-42 336.3 10.3 231 450-700 77-359 (377)
169 3lzb_A Epidermal growth factor 100.0 4.4E-37 1.5E-41 325.6 14.0 245 450-707 19-278 (327)
170 2r5t_A Serine/threonine-protei 100.0 3E-37 1E-41 331.9 12.6 239 444-697 38-286 (373)
171 3oz6_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 334.4 13.2 254 442-701 7-329 (388)
172 2y7j_A Phosphorylase B kinase 100.0 6.2E-37 2.1E-41 329.4 14.9 249 442-701 92-360 (365)
173 1u5q_A Serine/threonine protei 100.0 2.5E-37 8.7E-42 330.0 11.7 240 445-701 55-306 (348)
174 1t4h_A Serine/threonine-protei 100.0 9.1E-37 3.1E-41 317.3 15.6 243 450-701 30-283 (290)
175 3brb_A Proto-oncogene tyrosine 100.0 1.4E-36 4.9E-41 319.5 17.3 245 450-706 38-307 (313)
176 2zmd_A Dual specificity protei 100.0 1.2E-36 4E-41 330.1 17.0 239 450-701 60-321 (390)
177 4agu_A Cyclin-dependent kinase 100.0 5.1E-37 1.7E-41 322.5 13.6 249 450-701 7-285 (311)
178 3dbq_A Dual specificity protei 100.0 1.3E-36 4.3E-41 324.3 16.8 239 450-701 13-274 (343)
179 2vd5_A DMPK protein; serine/th 100.0 2.2E-37 7.5E-42 336.9 11.0 246 444-701 61-328 (412)
180 2xir_A Vascular endothelial gr 100.0 4.9E-37 1.7E-41 323.3 13.0 249 445-706 28-309 (316)
181 3gni_B Strad alpha; kinase fol 100.0 1.5E-36 5E-41 329.6 17.1 249 450-701 29-334 (389)
182 1xbb_A Tyrosine-protein kinase 100.0 8.7E-37 3E-41 317.7 14.7 243 450-705 20-277 (291)
183 2xrw_A Mitogen-activated prote 100.0 2.2E-36 7.5E-41 326.0 18.3 253 443-701 24-319 (371)
184 3mwu_A Calmodulin-domain prote 100.0 1.4E-36 4.9E-41 339.5 17.3 249 441-701 19-277 (486)
185 2v62_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 328.1 12.6 251 445-706 38-327 (345)
186 2acx_A G protein-coupled recep 100.0 3.5E-37 1.2E-41 345.8 12.3 246 445-701 185-445 (576)
187 2vgo_A Serine/threonine-protei 100.0 1E-36 3.5E-41 315.9 14.9 241 445-700 15-262 (284)
188 3lij_A Calcium/calmodulin depe 100.0 1.3E-36 4.4E-41 340.4 16.6 247 442-700 35-291 (494)
189 2h34_A Serine/threonine-protei 100.0 7.3E-37 2.5E-41 321.2 13.6 253 443-707 33-296 (309)
190 2jam_A Calcium/calmodulin-depe 100.0 4.8E-37 1.7E-41 321.7 12.1 249 442-701 7-262 (304)
191 2w1i_A JAK2; chromosomal rearr 100.0 9.1E-37 3.1E-41 323.0 14.4 251 450-706 45-321 (326)
192 2i1m_A Macrophage colony-stimu 100.0 8E-37 2.7E-41 324.3 13.7 246 450-706 50-325 (333)
193 3eqc_A Dual specificity mitoge 100.0 6.9E-37 2.4E-41 328.6 13.2 191 450-642 37-232 (360)
194 2buj_A Serine/threonine-protei 100.0 1E-36 3.5E-41 321.1 14.3 249 450-708 33-307 (317)
195 2yex_A Serine/threonine-protei 100.0 2.5E-36 8.5E-41 311.4 16.6 246 444-701 7-262 (276)
196 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-36 3.9E-41 341.7 15.3 248 442-701 34-302 (504)
197 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.4E-36 1.2E-40 319.0 17.9 253 443-701 33-319 (329)
198 2yfx_A Tyrosine-protein kinase 100.0 1.5E-36 5.2E-41 321.4 15.2 249 444-706 30-303 (327)
199 4hgt_A Casein kinase I isoform 100.0 9.2E-37 3.1E-41 317.9 13.3 253 444-706 9-279 (296)
200 3rp9_A Mitogen-activated prote 100.0 1.5E-36 5E-41 336.9 15.2 187 444-636 53-280 (458)
201 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-36 4.5E-41 340.3 14.8 242 450-700 189-448 (543)
202 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.2E-36 7.6E-41 325.3 16.0 237 450-705 69-337 (365)
203 3nyv_A Calmodulin-domain prote 100.0 6.6E-37 2.3E-41 342.1 12.2 247 443-701 25-282 (484)
204 3nsz_A CK II alpha, casein kin 100.0 1.7E-36 5.9E-41 321.3 14.7 246 450-701 40-320 (330)
205 3lm5_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 322.0 13.7 241 452-701 35-288 (327)
206 3uzp_A CKI-delta, CKID, casein 100.0 9.7E-37 3.3E-41 317.8 12.5 253 444-706 9-279 (296)
207 2clq_A Mitogen-activated prote 100.0 3.6E-36 1.2E-40 313.3 16.7 242 450-701 26-279 (295)
208 2jii_A Serine/threonine-protei 100.0 2.2E-37 7.7E-42 331.3 7.7 252 444-706 42-335 (352)
209 1vzo_A Ribosomal protein S6 ki 100.0 4.3E-37 1.5E-41 329.4 9.8 248 444-702 54-323 (355)
210 2rku_A Serine/threonine-protei 100.0 1.8E-36 6E-41 315.8 14.1 243 444-701 15-266 (294)
211 3j0a_A TOLL-like receptor 5; m 100.0 4E-35 1.4E-39 349.3 27.7 318 81-404 10-377 (844)
212 1cm8_A Phosphorylated MAP kina 100.0 1.7E-36 6E-41 326.1 14.3 251 444-701 25-308 (367)
213 3mtl_A Cell division protein k 100.0 6.6E-37 2.3E-41 323.8 10.8 248 450-701 6-282 (324)
214 2w5a_A Serine/threonine-protei 100.0 6.3E-37 2.2E-41 316.5 10.4 248 450-706 10-273 (279)
215 2vwi_A Serine/threonine-protei 100.0 7.4E-37 2.5E-41 319.7 11.0 250 445-701 16-288 (303)
216 3kvw_A DYRK2, dual specificity 100.0 1.7E-36 5.9E-41 332.9 14.3 189 450-643 101-302 (429)
217 3a7i_A MST3 kinase, serine/thr 100.0 4E-36 1.4E-40 314.6 16.3 240 450-701 26-271 (303)
218 4aaa_A Cyclin-dependent kinase 100.0 1.1E-36 3.8E-41 323.1 12.2 251 444-700 25-306 (331)
219 1x8b_A WEE1HU, WEE1-like prote 100.0 3.1E-36 1E-40 312.4 15.2 239 444-701 11-280 (289)
220 4g8a_A TOLL-like receptor 4; l 100.0 7.1E-35 2.4E-39 336.4 28.3 327 76-404 53-582 (635)
221 1phk_A Phosphorylase kinase; g 100.0 2.6E-36 8.9E-41 315.0 14.6 248 442-700 15-283 (298)
222 2owb_A Serine/threonine-protei 100.0 1.9E-36 6.4E-41 321.9 13.6 243 444-701 41-292 (335)
223 2h6d_A 5'-AMP-activated protei 100.0 2.9E-36 1E-40 310.9 14.0 239 450-701 15-262 (276)
224 3com_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 315.6 15.4 244 444-700 29-278 (314)
225 4fcg_A Uncharacterized protein 100.0 4.1E-36 1.4E-40 318.0 14.9 282 22-354 23-314 (328)
226 2pml_X PFPK7, Ser/Thr protein 100.0 4.7E-36 1.6E-40 320.4 15.5 252 444-701 31-323 (348)
227 3ll6_A Cyclin G-associated kin 100.0 4.7E-36 1.6E-40 318.5 15.3 241 450-706 32-307 (337)
228 2ycf_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 320.1 12.0 248 442-700 8-274 (322)
229 2j7t_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 316.3 12.4 246 444-701 19-276 (302)
230 1u46_A ACK-1, activated CDC42 100.0 2E-36 6.9E-41 314.6 11.9 247 450-708 22-285 (291)
231 1ua2_A CAK, cell division prot 100.0 6E-36 2.1E-40 319.4 15.8 252 444-701 10-292 (346)
232 3oja_B Anopheles plasmodium-re 100.0 1.1E-34 3.7E-39 332.5 27.3 305 79-404 55-360 (597)
233 3n9x_A Phosphotransferase; mal 100.0 2.1E-36 7.3E-41 332.7 12.5 193 443-641 25-253 (432)
234 3fme_A Dual specificity mitoge 100.0 3.5E-36 1.2E-40 312.7 13.4 241 450-700 11-266 (290)
235 3pfq_A PKC-B, PKC-beta, protei 100.0 4.4E-36 1.5E-40 346.9 15.5 241 445-700 342-597 (674)
236 1wak_A Serine/threonine-protei 100.0 4.6E-36 1.6E-40 326.2 14.7 252 444-701 37-392 (397)
237 2z81_A CD282 antigen, TOLL-lik 100.0 1E-34 3.5E-39 329.7 26.3 174 69-251 3-178 (549)
238 1ziw_A TOLL-like receptor 3; i 100.0 4.2E-34 1.4E-38 333.2 32.1 334 76-409 223-604 (680)
239 2r3i_A Cell division protein k 100.0 2.8E-35 9.7E-40 307.3 19.9 247 450-701 7-284 (299)
240 1zy4_A Serine/threonine-protei 100.0 4.8E-36 1.7E-40 313.3 13.5 245 444-701 6-284 (303)
241 1ogq_A PGIP-2, polygalacturona 100.0 4.4E-36 1.5E-40 315.8 13.2 253 101-380 50-307 (313)
242 3mi9_A Cell division protein k 100.0 7.1E-36 2.4E-40 319.5 14.9 252 443-701 16-312 (351)
243 4exu_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 324.6 12.0 251 444-701 42-324 (371)
244 3uqc_A Probable conserved tran 100.0 5.7E-36 2E-40 310.6 13.1 229 445-707 32-265 (286)
245 3e3p_A Protein kinase, putativ 100.0 1.1E-35 3.7E-40 319.1 15.4 253 442-701 21-315 (360)
246 3eb0_A Putative uncharacterize 100.0 8.1E-36 2.8E-40 323.0 14.3 242 450-700 11-321 (383)
247 2fst_X Mitogen-activated prote 100.0 3.1E-36 1.1E-40 323.9 10.7 251 444-701 29-312 (367)
248 3rgf_A Cyclin-dependent kinase 100.0 3.3E-36 1.1E-40 328.6 10.9 188 451-643 26-239 (405)
249 2wei_A Calmodulin-domain prote 100.0 1.5E-35 5.2E-40 307.7 15.3 249 441-701 19-277 (287)
250 3coi_A Mitogen-activated prote 100.0 9.2E-36 3.2E-40 318.9 14.0 251 444-701 24-306 (353)
251 2j0j_A Focal adhesion kinase 1 100.0 1.3E-35 4.6E-40 341.8 16.1 244 450-706 394-650 (656)
252 3pg1_A Mitogen-activated prote 100.0 5.6E-36 1.9E-40 321.7 11.6 254 442-701 20-317 (362)
253 2x7f_A TRAF2 and NCK-interacti 100.0 5.4E-36 1.8E-40 316.9 11.1 244 444-700 24-286 (326)
254 2wtk_C Serine/threonine-protei 100.0 2.2E-35 7.4E-40 309.1 15.5 243 443-701 4-264 (305)
255 1j1b_A Glycogen synthase kinas 100.0 7E-36 2.4E-40 327.2 12.3 243 450-701 58-337 (420)
256 4e7w_A Glycogen synthase kinas 100.0 4.8E-36 1.7E-40 325.8 10.9 250 450-705 44-328 (394)
257 3fhr_A MAP kinase-activated pr 100.0 6.8E-36 2.3E-40 317.7 11.8 250 442-701 26-288 (336)
258 3o6n_A APL1; leucine-rich repe 100.0 4.3E-34 1.5E-38 310.3 25.7 287 100-404 68-354 (390)
259 3qyz_A Mitogen-activated prote 100.0 1.5E-35 5E-40 318.8 13.7 251 445-701 28-314 (364)
260 2i6l_A Mitogen-activated prote 100.0 2E-35 6.8E-40 311.3 14.3 248 450-701 15-306 (320)
261 3sv0_A Casein kinase I-like; t 100.0 1.1E-35 3.9E-40 329.6 12.8 252 444-705 7-276 (483)
262 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.2E-36 1.1E-40 317.5 7.8 245 450-708 37-303 (319)
263 1z57_A Dual specificity protei 100.0 1.8E-35 6.2E-40 314.1 13.5 256 444-706 14-336 (339)
264 2z63_A TOLL-like receptor 4, v 100.0 2.9E-34 9.8E-39 327.4 24.4 304 101-406 28-487 (570)
265 2vx3_A Dual specificity tyrosi 100.0 1.9E-35 6.4E-40 320.0 13.8 196 443-643 53-261 (382)
266 3an0_A Dual specificity mitoge 100.0 9.3E-36 3.2E-40 317.1 11.2 241 450-700 55-310 (340)
267 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-35 3.9E-40 318.0 11.4 252 444-701 11-306 (353)
268 3aln_A Dual specificity mitoge 100.0 2.1E-35 7.1E-40 312.7 12.8 243 450-700 26-285 (327)
269 2rio_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 323.1 14.8 240 450-700 19-295 (434)
270 3a99_A Proto-oncogene serine/t 100.0 1E-35 3.5E-40 314.1 9.4 237 444-701 43-294 (320)
271 1blx_A Cyclin-dependent kinase 100.0 5.1E-35 1.8E-39 309.3 14.7 252 444-701 11-297 (326)
272 3m2w_A MAP kinase-activated pr 100.0 4.3E-35 1.5E-39 306.2 13.6 231 440-701 13-257 (299)
273 3oja_B Anopheles plasmodium-re 100.0 1.3E-33 4.3E-38 323.6 26.5 290 100-404 50-339 (597)
274 1q8y_A SR protein kinase; tran 100.0 3.2E-35 1.1E-39 317.0 12.5 248 450-701 23-334 (373)
275 3cek_A Dual specificity protei 100.0 1.3E-34 4.3E-39 304.6 16.5 242 445-701 29-293 (313)
276 2iwi_A Serine/threonine-protei 100.0 1.5E-35 5E-40 311.6 8.5 239 442-701 29-284 (312)
277 2dyl_A Dual specificity mitoge 100.0 7.3E-35 2.5E-39 306.9 13.4 244 445-700 26-283 (318)
278 2eu9_A Dual specificity protei 100.0 1.1E-34 3.7E-39 310.3 13.8 251 444-701 19-334 (355)
279 3p23_A Serine/threonine-protei 100.0 7.3E-35 2.5E-39 319.8 12.4 238 450-700 28-283 (432)
280 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-32 4.2E-37 304.3 28.8 297 76-404 43-354 (457)
281 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-32 8.9E-37 289.5 27.7 268 100-375 53-330 (332)
282 3qa8_A MGC80376 protein; kinas 100.0 2.4E-34 8.1E-39 325.9 12.3 251 443-698 13-295 (676)
283 2pzi_A Probable serine/threoni 100.0 5.1E-34 1.8E-38 331.5 14.9 236 444-704 80-325 (681)
284 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-32 7.3E-37 290.2 25.9 288 102-400 34-331 (332)
285 1xku_A Decorin; proteoglycan, 100.0 4.8E-32 1.6E-36 287.2 27.9 269 101-400 52-330 (330)
286 4fmz_A Internalin; leucine ric 100.0 4.2E-32 1.5E-36 289.6 26.8 302 76-402 45-346 (347)
287 1o6v_A Internalin A; bacterial 100.0 5.5E-32 1.9E-36 300.7 28.1 301 77-406 70-370 (466)
288 1o6v_A Internalin A; bacterial 100.0 4.5E-32 1.5E-36 301.5 26.7 301 75-404 90-390 (466)
289 1xku_A Decorin; proteoglycan, 100.0 8.6E-32 2.9E-36 285.3 27.0 283 61-376 29-330 (330)
290 4g8a_A TOLL-like receptor 4; l 100.0 8.8E-32 3E-36 310.4 28.9 302 76-379 77-581 (635)
291 3bz5_A Internalin-J, INLJ; leu 100.0 1E-31 3.4E-36 297.0 26.9 284 92-404 35-333 (457)
292 3dzo_A Rhoptry kinase domain; 100.0 4.3E-33 1.5E-37 304.4 12.0 231 450-700 82-363 (413)
293 3o6n_A APL1; leucine-rich repe 100.0 1.1E-31 3.7E-36 291.4 22.3 284 77-380 71-354 (390)
294 4fmz_A Internalin; leucine ric 100.0 6.7E-31 2.3E-35 280.3 27.3 286 100-406 43-328 (347)
295 1jl5_A Outer protein YOPM; leu 100.0 2.6E-30 9E-35 285.4 27.8 288 76-403 92-410 (454)
296 2z80_A TOLL-like receptor 2, v 100.0 2.9E-31 1E-35 283.9 16.9 286 59-382 26-318 (353)
297 1jl5_A Outer protein YOPM; leu 100.0 5.3E-31 1.8E-35 291.0 19.3 291 76-403 12-351 (454)
298 3oja_A Leucine-rich immune mol 100.0 9.7E-34 3.3E-38 315.9 -6.2 229 126-392 35-265 (487)
299 2vuw_A Serine/threonine-protei 100.0 2.7E-32 9.4E-37 289.8 5.3 235 450-699 24-329 (336)
300 2z66_A Variable lymphocyte rec 100.0 8.9E-31 3E-35 274.4 15.7 285 61-387 5-296 (306)
301 4fcg_A Uncharacterized protein 100.0 4.5E-30 1.5E-34 271.6 18.6 236 123-378 79-314 (328)
302 2z80_A TOLL-like receptor 2, v 100.0 3E-30 1E-34 276.1 16.8 277 103-406 33-318 (353)
303 2z66_A Variable lymphocyte rec 100.0 1.5E-30 5.1E-35 272.7 13.9 276 104-406 10-291 (306)
304 3zyi_A Leucine-rich repeat-con 100.0 9.7E-29 3.3E-33 273.5 23.8 227 101-329 75-302 (452)
305 1wwl_A Monocyte differentiatio 100.0 1.1E-30 3.7E-35 274.5 7.3 247 122-378 40-309 (312)
306 3zyj_A Leucine-rich repeat-con 100.0 3.4E-28 1.2E-32 268.1 23.4 109 101-209 64-172 (440)
307 3zyi_A Leucine-rich repeat-con 100.0 2.9E-28 9.9E-33 269.6 22.8 236 116-378 68-303 (452)
308 1wwl_A Monocyte differentiatio 100.0 1.9E-30 6.6E-35 272.6 4.0 246 100-355 42-310 (312)
309 1ozn_A Reticulon 4 receptor; N 100.0 5.9E-29 2E-33 257.7 14.8 207 100-330 31-238 (285)
310 3g06_A SSPH2 (leucine-rich rep 100.0 4.4E-28 1.5E-32 276.0 22.1 280 59-384 18-303 (622)
311 1ozn_A Reticulon 4 receptor; N 100.0 1E-28 3.5E-33 255.9 14.7 206 76-307 33-239 (285)
312 3zyj_A Leucine-rich repeat-con 100.0 1E-27 3.5E-32 264.3 22.9 243 107-354 49-292 (440)
313 1z7x_W Ribonuclease inhibitor; 100.0 2.3E-31 7.9E-36 295.2 -9.5 326 76-403 4-384 (461)
314 3o53_A Protein LRIM1, AGAP0063 100.0 6.9E-30 2.4E-34 269.0 1.5 169 104-282 13-182 (317)
315 1z7x_W Ribonuclease inhibitor; 99.9 5.6E-31 1.9E-35 292.1 -8.5 327 76-404 29-413 (461)
316 3o53_A Protein LRIM1, AGAP0063 99.9 4.5E-29 1.5E-33 262.8 3.4 258 126-397 11-270 (317)
317 3oja_A Leucine-rich immune mol 99.9 2.5E-28 8.5E-33 272.1 8.0 236 100-349 33-270 (487)
318 3g06_A SSPH2 (leucine-rich rep 99.9 3.5E-26 1.2E-30 260.3 24.4 268 101-412 40-307 (622)
319 2o6q_A Variable lymphocyte rec 99.9 3.4E-26 1.1E-30 235.0 21.8 144 61-210 3-146 (270)
320 4azs_A Methyltransferase WBDD; 99.9 1.7E-28 5.8E-33 277.5 4.0 181 454-639 242-437 (569)
321 2z62_A TOLL-like receptor 4, v 99.9 2.1E-25 7E-30 229.9 18.5 205 101-330 28-237 (276)
322 2z62_A TOLL-like receptor 4, v 99.9 2.9E-25 1E-29 228.7 17.7 211 76-309 29-240 (276)
323 3rfs_A Internalin B, repeat mo 99.9 5.4E-25 1.9E-29 226.3 15.0 227 102-365 20-246 (272)
324 3rfs_A Internalin B, repeat mo 99.9 1.4E-24 4.6E-29 223.3 15.2 208 100-342 40-247 (272)
325 4glp_A Monocyte differentiatio 99.9 2.1E-24 7E-29 226.4 14.4 227 101-355 64-308 (310)
326 2o6q_A Variable lymphocyte rec 99.9 2.4E-23 8.2E-28 213.7 21.8 109 102-213 17-125 (270)
327 2ast_B S-phase kinase-associat 99.9 4.9E-26 1.7E-30 241.4 1.4 237 61-327 35-282 (336)
328 1p9a_G Platelet glycoprotein I 99.9 2.3E-23 7.9E-28 216.0 20.9 84 121-209 6-89 (290)
329 3goz_A Leucine-rich repeat-con 99.9 1.1E-25 3.9E-30 241.3 3.5 251 106-356 3-299 (362)
330 3m19_A Variable lymphocyte rec 99.9 1.6E-23 5.5E-28 212.6 17.6 143 61-211 3-145 (251)
331 2ca6_A RAN GTPase-activating p 99.9 5.7E-26 2E-30 245.9 -3.1 255 116-382 23-320 (386)
332 1p9a_G Platelet glycoprotein I 99.9 8.3E-23 2.8E-27 211.8 20.5 203 145-378 6-208 (290)
333 2ca6_A RAN GTPase-activating p 99.9 8.3E-26 2.9E-30 244.6 -3.6 257 140-407 23-321 (386)
334 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.6E-28 221.0 12.3 225 125-379 64-308 (310)
335 3en9_A Glycoprotease, O-sialog 99.9 2.5E-24 8.4E-29 242.1 8.0 179 450-640 340-538 (540)
336 3goz_A Leucine-rich repeat-con 99.9 4.3E-25 1.5E-29 236.8 1.6 259 129-407 2-302 (362)
337 2ast_B S-phase kinase-associat 99.9 4.1E-25 1.4E-29 234.3 0.7 254 103-387 49-315 (336)
338 2xwt_C Thyrotropin receptor; s 99.9 5.5E-23 1.9E-27 207.0 14.9 197 101-327 31-236 (239)
339 3ogk_B Coronatine-insensitive 99.9 3.6E-25 1.2E-29 253.3 -1.9 324 77-404 140-503 (592)
340 2o6s_A Variable lymphocyte rec 99.9 3.7E-22 1.3E-26 196.4 17.7 186 61-270 5-190 (208)
341 2xwt_C Thyrotropin receptor; s 99.9 1.7E-22 6E-27 203.3 14.2 201 125-352 31-237 (239)
342 3ogk_B Coronatine-insensitive 99.9 3.1E-24 1.1E-28 245.5 0.1 327 76-404 113-478 (592)
343 1h6u_A Internalin H; cell adhe 99.9 8.5E-22 2.9E-26 206.1 16.6 192 123-330 39-230 (308)
344 3m19_A Variable lymphocyte rec 99.9 2E-21 6.7E-26 197.1 18.5 107 102-211 15-121 (251)
345 3cvr_A Invasion plasmid antige 99.9 1.1E-22 3.6E-27 228.9 9.9 200 64-317 49-254 (571)
346 1h6u_A Internalin H; cell adhe 99.9 1.2E-21 4E-26 205.1 15.3 192 100-307 40-231 (308)
347 3cvr_A Invasion plasmid antige 99.9 3E-21 1E-25 217.1 15.4 188 102-341 60-254 (571)
348 4ay9_X Follicle-stimulating ho 99.9 5.5E-21 1.9E-25 203.8 16.4 202 63-282 9-215 (350)
349 4ay9_X Follicle-stimulating ho 99.8 7.3E-21 2.5E-25 202.8 16.6 241 104-375 12-256 (350)
350 2o6s_A Variable lymphocyte rec 99.8 7.8E-21 2.7E-25 186.8 14.7 181 104-318 10-190 (208)
351 1zar_A RIO2 kinase; serine kin 99.8 5.7E-22 2E-26 204.3 6.5 130 450-592 94-242 (282)
352 4b8c_D Glucose-repressible alc 99.8 8.9E-22 3E-26 229.2 6.1 266 24-332 130-406 (727)
353 3e6j_A Variable lymphocyte rec 99.8 1.6E-19 5.4E-24 180.3 17.2 161 59-237 15-175 (229)
354 2p1m_B Transport inhibitor res 99.8 1.4E-22 4.8E-27 231.9 -7.0 322 76-401 106-493 (594)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 4E-19 1.4E-23 176.2 16.3 153 81-238 17-170 (220)
356 1m9s_A Internalin B; cell inva 99.8 2.3E-19 7.7E-24 204.0 14.2 192 101-332 21-212 (605)
357 1m9s_A Internalin B; cell inva 99.8 2.7E-19 9.4E-24 203.3 14.4 185 81-307 27-211 (605)
358 2v9t_B SLIT homolog 2 protein 99.8 1.1E-18 3.7E-23 173.1 16.8 158 61-235 9-166 (220)
359 2p1m_B Transport inhibitor res 99.8 8.8E-22 3E-26 225.3 -6.6 305 100-406 104-473 (594)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 8.3E-19 2.8E-23 173.9 14.0 155 104-285 14-169 (220)
361 1h6t_A Internalin B; cell adhe 99.8 5.4E-19 1.8E-23 183.2 13.1 170 100-307 45-214 (291)
362 2v9t_B SLIT homolog 2 protein 99.8 1.2E-18 4.1E-23 172.8 14.3 152 104-282 14-165 (220)
363 2xot_A Amphoterin-induced prot 99.8 4.4E-19 1.5E-23 189.8 11.8 126 81-211 24-150 (361)
364 1dce_A Protein (RAB geranylger 99.8 2E-21 6.9E-26 219.5 -6.8 202 100-324 348-567 (567)
365 1h6t_A Internalin B; cell adhe 99.8 8.2E-19 2.8E-23 181.8 13.3 191 102-332 25-215 (291)
366 2xot_A Amphoterin-induced prot 99.8 1.2E-18 4.1E-23 186.4 14.1 177 104-283 21-203 (361)
367 1dce_A Protein (RAB geranylger 99.8 5.1E-21 1.7E-25 216.2 -5.1 217 146-396 346-567 (567)
368 3e6j_A Variable lymphocyte rec 99.8 3.5E-18 1.2E-22 170.5 16.0 154 104-285 22-175 (229)
369 4b8c_D Glucose-repressible alc 99.8 7.4E-20 2.5E-24 213.1 3.8 223 101-355 173-405 (727)
370 1zth_A RIO1 serine protein kin 99.7 1.2E-18 4.2E-23 177.1 8.1 133 450-592 51-219 (258)
371 4ezg_A Putative uncharacterize 99.7 2.7E-18 9.4E-23 167.1 10.2 132 122-258 41-172 (197)
372 4ezg_A Putative uncharacterize 99.7 4.5E-18 1.5E-22 165.6 9.5 152 100-258 43-194 (197)
373 1w8a_A SLIT protein; signaling 99.7 6.3E-17 2.2E-21 156.7 15.2 136 62-214 7-143 (192)
374 1w8a_A SLIT protein; signaling 99.7 3.1E-17 1.1E-21 158.9 12.0 132 104-238 11-143 (192)
375 1xeu_A Internalin C; cellular 99.7 9E-18 3.1E-22 171.2 8.2 170 100-308 18-187 (263)
376 1xeu_A Internalin C; cellular 99.7 1.5E-17 5.2E-22 169.6 8.0 171 123-332 17-187 (263)
377 2o6r_A Variable lymphocyte rec 99.7 9.8E-16 3.4E-20 146.2 15.2 137 61-214 5-141 (177)
378 2je0_A Acidic leucine-rich nuc 99.7 1.2E-16 4.1E-21 147.9 8.0 128 100-229 16-148 (149)
379 2ell_A Acidic leucine-rich nuc 99.7 2.3E-16 8E-21 149.1 9.9 132 100-233 23-159 (168)
380 3sb4_A Hypothetical leucine ri 99.7 4.8E-17 1.6E-21 171.7 5.6 282 100-394 24-326 (329)
381 2wfh_A SLIT homolog 2 protein 99.6 2.6E-15 9E-20 145.3 15.2 111 100-211 30-140 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 4.6E-16 1.6E-20 147.1 9.5 134 123-282 22-160 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 2.1E-15 7.2E-20 146.0 14.1 128 104-235 13-140 (193)
384 2o6r_A Variable lymphocyte rec 99.6 2.8E-15 9.5E-20 143.0 13.8 133 103-238 9-141 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 3.6E-16 1.2E-20 144.6 6.7 109 124-234 16-126 (149)
386 3sb4_A Hypothetical leucine ri 99.6 7.7E-16 2.6E-20 162.4 9.2 261 100-372 48-328 (329)
387 4gyi_A RIO2 kinase; protein ki 99.6 2.1E-16 7.3E-21 167.1 2.9 133 448-589 97-262 (397)
388 1ds9_A Outer arm dynein; leuci 99.5 4.1E-17 1.4E-21 158.9 -9.1 130 100-234 17-153 (198)
389 1ds9_A Outer arm dynein; leuci 99.5 7.6E-17 2.6E-21 157.0 -8.3 150 121-299 14-180 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.5 2E-14 6.9E-19 136.9 7.9 106 100-210 18-126 (176)
391 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4.2E-18 130.6 13.1 104 105-211 13-116 (170)
392 1a9n_A U2A', U2A'; complex (nu 99.5 2.3E-14 7.8E-19 136.5 7.9 133 120-258 14-153 (176)
393 2r9u_A Variable lymphocyte rec 99.5 2.2E-13 7.6E-18 129.3 12.8 104 105-211 16-119 (174)
394 4fdw_A Leucine rich hypothetic 99.5 1.6E-12 5.4E-17 140.3 19.8 263 101-400 113-381 (401)
395 4fdw_A Leucine rich hypothetic 99.4 2.9E-12 9.9E-17 138.3 19.3 242 101-377 135-382 (401)
396 3g39_A Variable lymphocyte rec 99.4 7.5E-13 2.6E-17 125.2 11.7 107 127-236 11-117 (170)
397 2r9u_A Variable lymphocyte rec 99.4 1.5E-12 5.2E-17 123.5 11.7 106 127-235 14-119 (174)
398 2ifg_A High affinity nerve gro 99.3 5.5E-12 1.9E-16 133.8 11.7 89 121-210 27-116 (347)
399 2ifg_A High affinity nerve gro 99.3 6.7E-12 2.3E-16 133.1 11.3 109 63-187 8-117 (347)
400 3un9_A NLR family member X1; l 99.2 1.8E-13 6E-18 146.4 -6.2 187 100-306 71-283 (372)
401 3un9_A NLR family member X1; l 99.1 1E-12 3.6E-17 140.4 -5.3 167 124-310 71-256 (372)
402 3tm0_A Aminoglycoside 3'-phosp 99.1 1.5E-10 5E-15 117.5 10.0 137 450-590 18-212 (263)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 2.5E-10 8.4E-15 115.4 11.0 129 455-591 29-214 (264)
404 4fs7_A Uncharacterized protein 99.1 3.4E-09 1.2E-13 114.3 20.2 284 100-398 70-375 (394)
405 4fs7_A Uncharacterized protein 99.0 1.4E-08 4.7E-13 109.5 20.9 280 100-394 93-393 (394)
406 3dxp_A Putative acyl-COA dehyd 99.0 1.3E-09 4.4E-14 116.0 11.5 141 450-591 42-248 (359)
407 3rw6_A Nuclear RNA export fact 98.9 7.8E-12 2.7E-16 125.9 -8.4 141 62-214 77-237 (267)
408 4gt6_A Cell surface protein; l 98.9 7.3E-08 2.5E-12 103.7 19.5 287 102-401 65-390 (394)
409 2ra8_A Uncharacterized protein 98.8 8.9E-10 3E-14 116.7 2.3 202 75-304 107-341 (362)
410 2ra8_A Uncharacterized protein 98.8 1.2E-09 4.1E-14 115.7 2.1 164 165-352 164-341 (362)
411 3sg8_A APH(2'')-ID; antibiotic 98.7 6.9E-09 2.4E-13 107.6 5.4 186 451-641 25-288 (304)
412 4gt6_A Cell surface protein; l 98.6 1.1E-06 3.9E-11 94.3 20.2 272 118-400 56-368 (394)
413 3rw6_A Nuclear RNA export fact 98.5 3.5E-08 1.2E-12 99.2 1.9 96 106-203 148-257 (267)
414 3r70_A Aminoglycoside phosphot 98.4 6.2E-07 2.1E-11 93.5 10.6 133 450-591 41-237 (320)
415 1io0_A Tropomodulin; LRR prote 98.4 3.4E-08 1.2E-12 94.3 -0.4 110 100-209 35-163 (185)
416 4h09_A Hypothetical leucine ri 98.3 3.2E-05 1.1E-09 82.4 21.0 283 101-397 46-341 (379)
417 3tdw_A Gentamicin resistance p 98.2 4.7E-06 1.6E-10 86.2 12.0 137 450-591 23-224 (306)
418 1io0_A Tropomodulin; LRR prote 98.2 1.4E-07 4.8E-12 90.0 0.2 116 118-233 29-163 (185)
419 4h09_A Hypothetical leucine ri 98.2 9E-05 3.1E-09 78.9 21.0 264 100-375 68-343 (379)
420 3d1u_A Putative fructosamine-3 98.2 6E-06 2.1E-10 84.5 10.9 134 450-589 19-214 (288)
421 4gkh_A Aminoglycoside 3'-phosp 98.1 1.5E-05 5.3E-10 80.5 12.1 133 454-590 32-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 2.7E-05 9.1E-10 82.5 9.4 136 451-591 46-243 (362)
423 3ats_A Putative uncharacterize 97.9 1.8E-05 6.2E-10 83.6 7.4 79 452-530 26-122 (357)
424 2q83_A YTAA protein; 2635576, 97.6 0.00017 5.9E-09 75.3 10.6 135 452-590 38-251 (346)
425 3jr1_A Putative fructosamine-3 97.5 0.00034 1.2E-08 72.1 11.0 134 450-587 40-232 (312)
426 2olc_A MTR kinase, methylthior 97.5 0.00016 5.4E-09 77.5 8.2 74 451-526 35-120 (397)
427 3e4g_A ATP synthase subunit S, 97.4 3E-05 1E-09 72.3 1.4 34 102-135 62-95 (176)
428 3e4g_A ATP synthase subunit S, 97.4 5.4E-05 1.9E-09 70.5 2.7 91 118-208 54-150 (176)
429 2pyw_A Uncharacterized protein 97.1 0.00096 3.3E-08 72.0 9.4 73 450-525 38-122 (420)
430 3f7w_A Putative fructosamine-3 97.1 0.00077 2.6E-08 68.6 8.0 75 450-528 19-97 (288)
431 3csv_A Aminoglycoside phosphot 96.5 0.011 3.8E-07 61.2 11.3 32 560-591 182-217 (333)
432 1zyl_A Hypothetical protein YI 96.5 0.0082 2.8E-07 62.0 9.8 136 453-591 33-223 (328)
433 3rfe_A Platelet glycoprotein I 96.5 0.0051 1.7E-07 54.3 6.9 35 127-161 33-67 (130)
434 2ppq_A HSK, HK, homoserine kin 96.4 0.0032 1.1E-07 65.0 6.1 137 452-590 28-216 (322)
435 1pgv_A TMD-1, tropomodulin TMD 96.3 0.0013 4.4E-08 62.4 2.4 83 101-183 41-136 (197)
436 3dxq_A Choline/ethanolamine ki 96.2 0.003 1E-07 64.6 4.7 71 451-528 23-95 (301)
437 3rfe_A Platelet glycoprotein I 96.2 0.0089 3E-07 52.7 6.7 55 129-185 12-67 (130)
438 3feg_A Choline/ethanolamine ki 96.1 0.015 5.2E-07 61.3 9.4 134 453-590 57-253 (379)
439 1nw1_A Choline kinase (49.2 KD 96.0 0.012 3.9E-07 63.6 8.2 72 452-528 79-159 (429)
440 2qg7_A Ethanolamine kinase PV0 95.9 0.012 4E-07 64.0 7.6 73 452-528 114-188 (458)
441 3c5i_A Choline kinase; choline 95.9 0.011 3.8E-07 62.2 7.4 73 452-528 39-121 (369)
442 1pgv_A TMD-1, tropomodulin TMD 95.9 0.0023 8E-08 60.6 1.6 87 121-207 37-136 (197)
443 3i1a_A Spectinomycin phosphotr 95.1 0.093 3.2E-06 54.4 10.6 31 561-591 206-236 (339)
444 3mes_A Choline kinase; malaria 91.2 0.28 9.7E-06 52.3 6.8 72 453-528 77-157 (424)
445 3f2s_A CK, chetk-alpha, cholin 90.5 0.36 1.2E-05 51.1 6.6 30 561-590 244-279 (401)
446 2yle_A Protein spire homolog 1 86.1 4.4 0.00015 38.5 10.2 99 527-639 34-135 (229)
447 4ann_A ESSB; membrane protein, 84.5 2.4 8.2E-05 40.2 7.6 91 492-590 37-127 (215)
448 4ano_A ESSB; membrane protein, 81.7 4.6 0.00016 38.4 8.4 85 499-591 48-133 (219)
449 3cxl_A N-chimerin; SH2, RHO-GA 70.6 0.61 2.1E-05 50.4 -1.3 58 452-512 148-215 (463)
450 3g15_A CK, chetk-alpha, cholin 66.1 3.2 0.00011 43.8 3.2 29 563-591 246-280 (401)
451 1cja_A Protein (actin-fragmin 39.5 1.8E+02 0.006 29.4 10.6 76 515-592 156-238 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.2e-51 Score=425.21 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=196.6
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|..||||+++.... ..+.|.+|+++|++++|||||+++|+|.+++..+|||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 557899999999999985 3578999999986433 467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 523 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 523 ~~~gsL~~~l~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
|++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence 999999999964 478999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc
Q 005177 588 FKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 588 la~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
+|+....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 9986543221 11224445778899988999999999999999999999 88888643211 1111121111
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....+.. ...++.+++.+||+.||++||||+||++.|+++.
T Consensus 248 ~~~~p~~---~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 248 VLQRPRT---CPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcc---chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111111 2345778999999999999999999999998764
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.1e-51 Score=424.92 Aligned_cols=245 Identities=17% Similarity=0.202 Sum_probs=196.3
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.+ .+++.||||+++... ...+.|.+|++++++++|||||+++|+|.+++..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 346799999999999985 357899999997542 236789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 522 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 522 y~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
||++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence 9999999999953 368999999999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++....... ....++..|.+||+.....++.++|||||||++|||+| |+.||.+.... + ....+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~-----~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-D-----VVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-H-----HHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-H-----HHHHH
Confidence 99999986543221 11223445778898888899999999999999999999 78888643211 1 11111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+....+.+. +....+.+++.+||+.||++||||.||+++|+.+.
T Consensus 261 ~~~~~~~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNRQVLPCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcCCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1111111122 22345778999999999999999999999998764
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-50 Score=476.54 Aligned_cols=372 Identities=31% Similarity=0.435 Sum_probs=231.3
Q ss_pred hccCCChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcCCCCCccc---CCc--
Q 005177 19 PAVSANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGA---LPG-- 93 (710)
Q Consensus 19 ~~~~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~-- 93 (710)
+++.+.++|++||++||+++.||. ++++|+. +++||+|.||+|+ +++|+.++|++.++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~--------~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l 73 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSS--------NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSL 73 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCT--------TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCC--------CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhH
Confidence 344556789999999999999998 9999973 5689999999998 58999999999999987 554
Q ss_pred ---------------------chhhhcCCCCcEEECCCCcCcccCCc--cccCCCCCcEEECcCCCCCCCCChhh-cCCC
Q 005177 94 ---------------------KPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRNNFSGHFPGGI-QSLR 149 (710)
Q Consensus 94 ---------------------~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~L~ 149 (710)
.+.. +++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .+++
T Consensus 74 ~~L~~L~~l~~~~~~~~~l~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~ 151 (768)
T 3rgz_A 74 LSLTGLESLFLSNSHINGSVSGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN 151 (768)
T ss_dssp TTCTTCCEEECTTSCEEECCCCCCC--CTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred hccCcccccCCcCCCcCCCchhhcc--CCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence 3444 78899999999999998888 89999999999999999988888766 7788
Q ss_pred CCCEEECCCCCCCcCCchh---ccC----------------------CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEe
Q 005177 150 NLLVLDAFSNSFSGSVPAE---ISQ----------------------LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (710)
Q Consensus 150 ~L~~L~L~~N~l~~~~p~~---~~~----------------------L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 204 (710)
+|++|||++|.+++..|.. +.+ +++|++|+|++|++++.+|. ++++++|++|++
T Consensus 152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 8888888888887766655 444 44455555555555554554 555666666666
Q ss_pred cCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCC-CCCcEEEccccccCC
Q 005177 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL-TKLESLFLFRNQLAG 283 (710)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l-~~L~~L~L~~n~l~~ 283 (710)
++|.+++.+|..++.+++|++|++++|.+.+.+|.. .+++|++|++++|+++|.+|..+... ++|++|++++|++++
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~ 308 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC
Confidence 666666555555555555555555555555544433 44444444444454444455444432 555555555555555
Q ss_pred CCCccccCCCCCCEEEccCCCCCCCCCcc-ccCCCCCCEEEcccccCcccCCcccCCCC-CCcEEeccCCCCCCCCCccc
Q 005177 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPENL 361 (710)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~l 361 (710)
.+|..+.++++|++|++++|++.|.+|.. +..+++|++|++++|++++.+|..+..++ +|++|++++|.++|.+|..+
T Consensus 309 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred ccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 55555555555555555555555444443 44555555555555555444444444433 44444444444444333333
Q ss_pred CC--CCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 362 GR--NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 362 ~~--~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
.. +++|+.|++++|.++|.+|..++.++.|+.|++++|+++|.+|
T Consensus 389 ~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 435 (768)
T 3rgz_A 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435 (768)
T ss_dssp TCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCC
T ss_pred hhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCccc
Confidence 33 3344444444444444444444444444444444444444433
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.1e-51 Score=429.49 Aligned_cols=246 Identities=17% Similarity=0.194 Sum_probs=193.6
Q ss_pred hhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..++||+|+||.||+|+.. +|+.||||+++.... ..+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 5578999999999999853 588999999986433 467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcc
Q 005177 523 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 585 (710)
Q Consensus 523 ~~~gsL~~~l~~-----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~D 585 (710)
|++|+|.++++. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence 999999999864 368999999999999999999998 999999999999999999999999
Q ss_pred cCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccc
Q 005177 586 FGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 586 fGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+++........ ...++..|++||+.....++.++|||||||++|||+| |+.||.+....+ ....+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH------HHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH------HHHHHHc
Confidence 9999865432211 1223445778899988999999999999999999999 888886433211 1111111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
......+.. ...++.+++.+||+.||++||||+||+++|+.+.+
T Consensus 276 g~~~~~p~~---~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GRELERPRA---CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TCCCCCCTT---CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCccc---ccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 111111121 23457789999999999999999999999988754
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-50 Score=420.56 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|++.. .||||+++.. ....+.|.+|++++++++|||||+++|+|.+ +..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 56789999999999998743 5999999753 2346789999999999999999999999864 5789999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----CC
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----~~ 599 (710)
+|.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+....... ..
T Consensus 117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 193 (307)
T 3omv_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence 99999964 579999999999999999999998 999999999999999999999999999987543211 11
Q ss_pred cccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 600 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
..++..|.+||++.. .+++.++|||||||++|||+||+.||.+...... ...........+. . .....+....
T Consensus 194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~~~~p~-~--~~~~~~~~~~ 269 (307)
T 3omv_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPD-L--SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTTCCCCC-S--TTSCTTSCHH
T ss_pred cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCC-c--ccccccchHH
Confidence 224555778888753 3589999999999999999999999975432111 1100111111111 0 1111122346
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.||++||||.||+++|+.++
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 778999999999999999999999998775
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.1e-50 Score=420.40 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=195.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|++ +|+.||||+++........+..|+..+.+++|||||+++|+|.+++ ..|||||||++
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 457899999999999997 7999999999865544444556777788999999999999998754 57999999999
Q ss_pred CChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 526 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 526 gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
|||.++++. .++|..+.+|+.|+|+||+|||+++ .++||||||||+|||+|.++.+||+|||+|+........
T Consensus 86 gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 165 (303)
T 3hmm_A 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce
Confidence 999999976 6799999999999999999999863 569999999999999999999999999999876432211
Q ss_pred -----CcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc----------cc---
Q 005177 599 -----FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------GL--- 654 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~----------~~--- 654 (710)
...++.+|++||++.+. +++.++|||||||++|||+||+.|+......+ .+.. ..
T Consensus 166 ~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~ 244 (303)
T 3hmm_A 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ-LPYYDLVPSDPSVEEMRKV 244 (303)
T ss_dssp SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC-CTTTTTSCSSCCHHHHHHH
T ss_pred eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccc-ccchhcccccchHHHHHHH
Confidence 11245667888887543 46788999999999999999988765322111 1110 00
Q ss_pred -ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 655 -LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 655 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+..++. .+......+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 245 ~~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 245 VCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HTTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 01111111 1101111234567789999999999999999999999998875
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-48 Score=411.52 Aligned_cols=242 Identities=15% Similarity=0.239 Sum_probs=199.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+++..|||||||++|+
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 677899999999999985 6899999999976432 35668899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+........ ...+++
T Consensus 158 L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 234 (346)
T 4fih_A 158 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 234 (346)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCc
Confidence 9999965 678999999999999999999999 9999999999999999999999999999876433221 223667
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+|++||++....++.++||||+||++|||+||+.||.+..... .+..+.+.. ......+......+.+++.+|
T Consensus 235 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCSCGGGSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCC-CCCCCccccCCHHHHHHHHHH
Confidence 7889999988899999999999999999999999997543211 111111111 111112223345677899999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
|+.||++|||++|++++
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999864
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-48 Score=401.56 Aligned_cols=242 Identities=19% Similarity=0.214 Sum_probs=189.7
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEee
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDY 522 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey 522 (710)
.++||+|+||.||+|.. .+|..||||++.... ...+.|.+|++++++++|||||+++++|.+ ++..||||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 45799999999999985 679999999997542 235678999999999999999999999865 3468999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|++|+|.++++. .+++.....|+.||++||+|||++ .++||||||||+|||++. ++.+||+|||+|+.........
T Consensus 111 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~ 189 (290)
T 3fpq_A 111 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 189 (290)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEE
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCC
Confidence 999999999975 678999999999999999999987 234999999999999984 7999999999998654322222
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++++|++||+... +++.++|||||||++|||+||+.||.+...... ....+.... .+ ........+++.+
T Consensus 190 ~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-----~~~~i~~~~-~~-~~~~~~~~~~~~~ 261 (290)
T 3fpq_A 190 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSGV-KP-ASFDKVAIPEVKE 261 (290)
T ss_dssp SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTTC-CC-GGGGGCCCHHHHH
T ss_pred cccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-----HHHHHHcCC-CC-CCCCccCCHHHHH
Confidence 235667888898764 699999999999999999999999975432211 011111111 00 0001112245778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 005177 680 VALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
++.+||+.||++|||++|++++
T Consensus 262 li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 262 IIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999763
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6e-48 Score=445.22 Aligned_cols=363 Identities=21% Similarity=0.317 Sum_probs=319.5
Q ss_pred ChhhHHHHHHHHhhCCCCCC--------CCCCCCCCCCCCCCCCCCCcee---eeeeeCCCCCcEEEEEcCCCCCcccCC
Q 005177 24 NDPYSEALLSLKSELVDDFN--------SLHDWFVPPGVNPAGKIYACSW---SGVKCNKNNTIVVGINLSMKGLSGALP 92 (710)
Q Consensus 24 ~~~~~~all~~k~~~~~~~~--------~l~~w~~~~~~~~~~~~~~C~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~ 92 (710)
...|++||.+++.++.++.. ...+|+. +++||.| .||+|+. .++|+.++|+++++.|.+|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~--------~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp 98 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF--------NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVP 98 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCC--------SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC--------CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCC
Confidence 44699999999999965532 2335653 5689999 9999987 4899999999999999999
Q ss_pred cchhhhcCCCCcEEECCCCc------------------------------------------------------------
Q 005177 93 GKPLRIFFNELVDLNLSHNS------------------------------------------------------------ 112 (710)
Q Consensus 93 ~~~~~~~l~~L~~L~Ls~N~------------------------------------------------------------ 112 (710)
+.++. +++|++|||++|.
T Consensus 99 ~~l~~--L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 99 DAIGQ--LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp GGGGG--CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred hHHhc--CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 99998 9999999999984
Q ss_pred ------------------CcccCCccccCCCCCcEEECcCCCCCCC-----------------CChhhc--CCCCCCEEE
Q 005177 113 ------------------FSGQFPVEIFNLTSLISLDISRNNFSGH-----------------FPGGIQ--SLRNLLVLD 155 (710)
Q Consensus 113 ------------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~L~~L~~L~ 155 (710)
++| +|.+++++++|++|+|++|.++|. +|..++ ++++|++|+
T Consensus 177 ~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 177 KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 445 889999999999999999999996 999999 999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCC-CCC-CCCcccCCC------CCCCeEEecCCcCCCCCcc--cccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSG-PIPSQFGSF------KSLEFLHLAGNLLNDQIPA--ELGMLKTVTH 225 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~ 225 (710)
|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..++++ ++|++|++++|.++ .+|. .++.+++|++
T Consensus 256 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~ 334 (636)
T 4eco_A 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGM 334 (636)
T ss_dssp EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCE
T ss_pred ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCE
Confidence 99999999999999999999999999998 998 899988876 99999999999999 8998 8999999999
Q ss_pred cccccccccccCCccccCCCccchhccccccCCccCchhccCCCC-CcEEEccccccCCCCCccccCCC--CCCEEEccC
Q 005177 226 MEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK-LESLFLFRNQLAGQVPWEFSRVT--TLKSLDLSD 302 (710)
Q Consensus 226 L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~Ls~ 302 (710)
|++++|.++|.+| .++++++|++|++++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++ +|+.|++++
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 9999999999999 8999999999999999999 88888999999 999999999998 7888777655 899999999
Q ss_pred CCCCCCCCcccc-------CCCCCCEEEcccccCcccCCcc-cCCCCCCcEEeccCCCCCCCCCcccCCC--------CC
Q 005177 303 NRLSGPIPESFA-------DLKNLRLLSLMYNEMSGTVPES-LVQLPSLEILFIWNNYFSGSLPENLGRN--------SK 366 (710)
Q Consensus 303 N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~l~~~--------~~ 366 (710)
|++++.+|..+. .+++|+.|+|++|++++ +|.. +..+++|++|+|++|.++ .+|...... ++
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK-FPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCS-CCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGG
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccCc-CCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCC
Confidence 999999998888 78899999999999984 5544 556899999999999998 666654332 28
Q ss_pred CcEEECCCCcCCccCccccc--CCCceeeEecccCCcccchh
Q 005177 367 LRWVDVSTNNFNGSIPPDIC--SGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 367 L~~L~ls~N~l~g~ip~~~~--~~~~L~~l~l~~N~l~g~i~ 406 (710)
|+.|++++|+++ .+|..+. .+++|+.|++++|++++ +|
T Consensus 490 L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip 529 (636)
T 4eco_A 490 LTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FP 529 (636)
T ss_dssp CCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred ccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cC
Confidence 999999999998 7888887 88899999999999988 55
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.4e-48 Score=406.39 Aligned_cols=241 Identities=17% Similarity=0.138 Sum_probs=193.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 566799999999999985 6799999999985432 34699999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCC-------C
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-------S 598 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~-------~ 598 (710)
.++++. .+++.+...|+.||+.||+|||+. +||||||||+|||++.++ .+||+|||+|+....... .
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence 999975 678999999999999999999998 999999999999999987 699999999987643211 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...++++|++||+..+..++.++|||||||++|||+||+.||.+..... ....+.... ......+......+.
T Consensus 215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP------LCLKIASEP-PPIREIPPSCAPLTA 287 (336)
T ss_dssp CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC------CHHHHHHSC-CGGGGSCTTSCHHHH
T ss_pred ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHcCC-CCchhcCccCCHHHH
Confidence 1235667889999988899999999999999999999999997543211 111111111 000001112234567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSG 704 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~ 704 (710)
+++.+||+.||++|||+.|+++.|..
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 88999999999999999999988754
No 11
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-48 Score=410.13 Aligned_cols=242 Identities=16% Similarity=0.192 Sum_probs=191.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..||||
T Consensus 25 ~Y~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 25 KYV--RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CEE--EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 454 788999999999999985 689999999998642 23567899999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 521 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||++|+|.+++.. ..++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 99999999999964 247788899999999999999998 99999999999999999999999999998764321
Q ss_pred C--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++++|.+||++.+..++.++||||+||++|||+||+.||.+..... .+.++........+. ...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~~~~~~~---~~s 250 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN------LVLKIISGSFPPVSL---HYS 250 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTCCCCCCT---TSC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCCCCCCCc---cCC
Confidence 1 11225667889999998899999999999999999999999997543211 111222211111111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 45778999999999999999999976
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.1e-47 Score=443.32 Aligned_cols=362 Identities=21% Similarity=0.291 Sum_probs=302.4
Q ss_pred CChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCC--cee------------eeeeeCCCCCcEEEEEcCCCCCc
Q 005177 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYA--CSW------------SGVKCNKNNTIVVGINLSMKGLS 88 (710)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~--C~w------------~gv~C~~~~~~v~~l~l~~~~l~ 88 (710)
+..+|++||++||+++.+| +|+...++ + ..+| |.| .||+|+. .++|+.++|+++++.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~-~--~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGT-I--NNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSS-C--SSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCc-c--cccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 3457999999999999877 89753110 1 1244 999 9999997 689999999999999
Q ss_pred ccCCcchhhhcCCCCcEEEC-CCCcCccc---------------------------------------------------
Q 005177 89 GALPGKPLRIFFNELVDLNL-SHNSFSGQ--------------------------------------------------- 116 (710)
Q Consensus 89 g~~~~~~~~~~l~~L~~L~L-s~N~l~~~--------------------------------------------------- 116 (710)
|.+|+.++. |++|++||| ++|.++|.
T Consensus 337 G~ip~~l~~--L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 337 GRVPDAIGQ--LTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp EEECGGGGG--CTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CcCchHHhc--cccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 999999999 999999999 88866554
Q ss_pred -------------------------CCccccCCCCCcEEECcCCCCCC-----------------CCChhhc--CCCCCC
Q 005177 117 -------------------------FPVEIFNLTSLISLDISRNNFSG-----------------HFPGGIQ--SLRNLL 152 (710)
Q Consensus 117 -------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~L~~L~ 152 (710)
+|..|+++++|++|+|++|.++| .+|..++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 88899999999999999999999 4899988 999999
Q ss_pred EEECCCCCCCcCCchhccCCCCCCEEEccCCC-CCC-CCCcccCCCC-------CCCeEEecCCcCCCCCcc--cccccc
Q 005177 153 VLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSG-PIPSQFGSFK-------SLEFLHLAGNLLNDQIPA--ELGMLK 221 (710)
Q Consensus 153 ~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~ 221 (710)
+|+|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|.++ .+|. .++.++
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 99999999999999999999999999999998 998 8887666554 9999999999999 8998 899999
Q ss_pred cccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCC-CcEEEccccccCCCCCccccCCCC--CCEE
Q 005177 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK-LESLFLFRNQLAGQVPWEFSRVTT--LKSL 298 (710)
Q Consensus 222 ~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L 298 (710)
+|+.|++++|.++ .+| .++++++|+.|++++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|
T Consensus 574 ~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 574 KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 9999999999998 888 8999999999999999999 88888999998 999999999998 77877766654 8899
Q ss_pred EccCCCCCCCCCccc---c--CCCCCCEEEcccccCcccCCcccC-CCCCCcEEeccCCCCCCCCCcccCCC--------
Q 005177 299 DLSDNRLSGPIPESF---A--DLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIWNNYFSGSLPENLGRN-------- 364 (710)
Q Consensus 299 ~Ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~l~~~-------- 364 (710)
++++|++.+.+|... . .+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.++ .+|..+...
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl 727 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNT 727 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccccc
Confidence 999998888766432 2 2347778888888877 4555443 6777888888888777 566554432
Q ss_pred CCCcEEECCCCcCCccCccccc--CCCceeeEecccCCccc
Q 005177 365 SKLRWVDVSTNNFNGSIPPDIC--SGGVLFKLILFSNNFTG 403 (710)
Q Consensus 365 ~~L~~L~ls~N~l~g~ip~~~~--~~~~L~~l~l~~N~l~g 403 (710)
++|+.|++++|+++ .+|..+. .+++|+.|++++|++++
T Consensus 728 ~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~ 767 (876)
T 4ecn_A 728 YLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS 767 (876)
T ss_dssp GGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred CCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc
Confidence 27777888887777 6777776 77777788888877777
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.2e-48 Score=410.61 Aligned_cols=245 Identities=20% Similarity=0.212 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCC-CCceeEEEEEEcC-CceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRH-KNLIRLLGFCYNR-HQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~-~~~~lv 519 (710)
..+.||+|+||.||+|.. ..++.||||+++... ...+.|.+|+++|.+++| ||||+++|+|.++ +..+||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 567899999999999974 235789999998643 235679999999999976 8999999999764 568999
Q ss_pred EeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 520 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
||||++|+|.++|+. .++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 999999999999963 257999999999999999999999 99999999999999999999
Q ss_pred EEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccc
Q 005177 582 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLG 656 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 656 (710)
||+|||+|+........ ...++..|++||+.....++.++|||||||++|||+| |+.||.+...... .. .
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~~----~ 299 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC----R 299 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HH----H
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-HH----H
Confidence 99999999865432211 1123445678898888899999999999999999998 8888864332111 10 1
Q ss_pred ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 657 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+.+......+.. ...++.+++.+||+.||++||||.|++++|+.+
T Consensus 300 ~i~~g~~~~~p~~---~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 300 RLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCCcc---CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 1111111111111 234577889999999999999999999999876
No 14
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.4e-47 Score=412.77 Aligned_cols=242 Identities=15% Similarity=0.241 Sum_probs=198.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+++|++++|||||+++++|.+++..|||||||++|+
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 778899999999999985 689999999998643 235668899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.++++. .+++.+...|+.||++||+|||+. +||||||||+||||+.++.+||+|||+|+........ ...+++
T Consensus 235 L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 311 (423)
T 4fie_A 235 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 311 (423)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECT
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCc
Confidence 9999965 678999999999999999999999 9999999999999999999999999999876433222 223677
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
+|++||++....++.++||||+||++|||++|+.||.+...... +..+.+.. ......+......+.+++.+|
T Consensus 312 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 384 (423)
T 4fie_A 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 384 (423)
T ss_dssp TTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSC-CCCCSCTTSSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHcCC-CCCCcccccCCHHHHHHHHHH
Confidence 78899999888999999999999999999999999975432111 11111111 000111122235677899999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
|+.||++|||+.|++++
T Consensus 385 L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 385 LVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999874
No 15
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.8e-47 Score=394.60 Aligned_cols=240 Identities=18% Similarity=0.163 Sum_probs=197.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|||
T Consensus 33 dy~--i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 33 DFK--FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccE--EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 355 778999999999999985 789999999998642 2356789999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||||++|+|.+++.. .+++.+...|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999975 678888999999999999999999 999999999999999999999999999987643211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....++++|++||+.....++.++||||+||++|||+||+.||.+.... .....+.... ...+. ..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~ 257 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLE-YDFPE---KF 257 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TC
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCc---cc
Confidence 1223667788999999889999999999999999999999999754321 1111222111 11111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl 699 (710)
..++.+++.+|++.||++|||++|+.
T Consensus 258 s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 34567899999999999999999863
No 16
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-46 Score=384.61 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=185.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 13 g~Y~--i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 13 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp -CCE--EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4465 778999999999999985 679999999997642 225678999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||| +|+|.+++.. .+++.+...++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99999 6899999865 678899999999999999999999 99999999999999999999999999998754322
Q ss_pred C-CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++++|++||...+..+ +.++||||+||++|||+||+.||.+.... .....+.... ...+.. ..
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~~~~i~~~~-~~~p~~---~s 236 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPKF---LS 236 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCTT---SC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCC-CCCCCC---CC
Confidence 2 12236677889999887765 57899999999999999999999753211 1111111111 111111 23
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 456789999999999999999999873
No 17
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.7e-47 Score=391.79 Aligned_cols=241 Identities=16% Similarity=0.126 Sum_probs=188.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+|. ..+.||+|+||.||+|+. .+++.||||.++... .....+.+|++++++++|||||++++++.+++..|
T Consensus 25 ~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 25 QFE--LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GEE--EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccE--EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 355 778999999999999974 357899999997642 22456888999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+|||||++|+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999975 578889999999999999999999 9999999999999999999999999999865322
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....++++|++||......++.++||||+||++|||+||+.||.+..... ....+.... ...+.. .
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~~-~~~p~~---~ 249 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE------TMTMILKAK-LGMPQF---L 249 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---S
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH------HHHHHHcCC-CCCCCc---C
Confidence 21 22235677889999998899999999999999999999999997543211 111121111 111111 2
Q ss_pred HHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
..++.+++.+||+.||++||| ++|+++
T Consensus 250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 345678999999999999998 467764
No 18
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.5e-46 Score=384.64 Aligned_cols=241 Identities=17% Similarity=0.210 Sum_probs=184.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-------
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------- 514 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------- 514 (710)
+|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 6 DFE--PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HEE--EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hCE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 355 678999999999999985 689999999997643 23567899999999999999999999987644
Q ss_pred -----ceeEEEeecCCCChhhhhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 515 -----QAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 515 -----~~~lv~Ey~~~gsL~~~l~~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
..|+|||||++|+|.+++... .++....+|+.|+++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 369999999999999999752 35667789999999999999999 99999999999999999999999
Q ss_pred ccCccccccccCCC--------------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc
Q 005177 585 EFGFKYLTQLADGS--------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 650 (710)
Q Consensus 585 DfGla~~~~~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~ 650 (710)
|||+|+........ ...++++|++||...+..++.++|||||||++|||++ ||......
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---- 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---- 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----
Confidence 99999875432110 1125667888999988899999999999999999997 55422110
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+ ...++.+.+..+...+++.+||+.||++|||+.|++++
T Consensus 234 -~~~~~~~~~---~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 -VRTLTDVRN---LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHHHHHHHT---TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHhc---CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001111111 11123334445566789999999999999999999873
No 19
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.3e-45 Score=428.90 Aligned_cols=329 Identities=34% Similarity=0.566 Sum_probs=195.2
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCcc-ccCCCCCcEEECcCCCCCCCCChhhcCCC-CCCE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVE-IFNLTSLISLDISRNNFSGHFPGGIQSLR-NLLV 153 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~ 153 (710)
.+..++++++.+.|.+|..+.. +++|++|+|++|.++|.+|.. +.++++|++|+|++|.+++.+|..+.+++ +|++
T Consensus 295 ~L~~L~Ls~n~l~~~~p~~~~~--l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~ 372 (768)
T 3rgz_A 295 TLTGLDLSGNHFYGAVPPFFGS--CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372 (768)
T ss_dssp TCSEEECCSSEEEECCCGGGGG--CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSE
T ss_pred cCCEEECcCCcCCCccchHHhc--CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcE
Confidence 4677788888888877777777 777888888888877777765 77777777777777777777777666554 5555
Q ss_pred EECCCCCCCc--------------------------CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCC
Q 005177 154 LDAFSNSFSG--------------------------SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (710)
Q Consensus 154 L~L~~N~l~~--------------------------~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (710)
|++++|.+++ .+|..++++++|++|+|++|++++.+|..++++++|+.|++++|
T Consensus 373 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 452 (768)
T 3rgz_A 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452 (768)
T ss_dssp EECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred EEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCC
Confidence 5555555554 44445555555555555555555555555555555555555555
Q ss_pred cCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCc
Q 005177 208 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW 287 (710)
Q Consensus 208 ~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 287 (710)
.+++.+|..++.+++|+.|++++|.++|.+|..++++++|++|++++|++++.+|..++.+++|+.|++++|+++|.+|.
T Consensus 453 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 532 (768)
T 3rgz_A 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCG
T ss_pred cccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCCCCCEEEccCCCCCCCCCccc------------------------------------------------------
Q 005177 288 EFSRVTTLKSLDLSDNRLSGPIPESF------------------------------------------------------ 313 (710)
Q Consensus 288 ~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------------------------------------------ 313 (710)
.+..+++|+.|++++|+++|.+|..+
T Consensus 533 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 612 (768)
T 3rgz_A 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP 612 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCC
T ss_pred HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccc
Confidence 55555555555555555554444322
Q ss_pred ----------------cCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcC
Q 005177 314 ----------------ADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNF 377 (710)
Q Consensus 314 ----------------~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l 377 (710)
..+++|+.|+|++|+++|.+|..++.+++|+.|+|++|.++|.+|..++++++|+.||+++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 1233455555555555555555555555555555555555555555555555555555555555
Q ss_pred CccCcccccCCCceeeEecccCCcccchh
Q 005177 378 NGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 378 ~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+|.+|..+..++.|++|++++|+++|.||
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 55555555555555555555555555554
No 20
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.6e-44 Score=377.48 Aligned_cols=297 Identities=28% Similarity=0.481 Sum_probs=222.6
Q ss_pred CCChhhHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCce--eeeeeeCCCC--CcEEEEEcCCCCCcc--cCCcch
Q 005177 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS--WSGVKCNKNN--TIVVGINLSMKGLSG--ALPGKP 95 (710)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~C~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~ 95 (710)
.|.++|++||++||+++.||. .+.+|.. +.+||. |.||+|+..+ ++|+.++++++++.| .+|+.+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~--------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l 72 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP--------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT--------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGG
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC--------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhH
Confidence 477899999999999998885 7899964 457888 9999998644 677777777777776 666666
Q ss_pred hhhcCCCCcEEECCC-CcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCC
Q 005177 96 LRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEH 174 (710)
Q Consensus 96 ~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~ 174 (710)
.. +++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+.++++
T Consensus 73 ~~--l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 73 AN--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GG--CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hC--CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 66 66677777763 6666666666666677777777766666666666666666666666666666666666666666
Q ss_pred CCEEEccCCCCCCCCCcccCCCC-CCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccc
Q 005177 175 LKVLNLAGSYFSGPIPSQFGSFK-SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (710)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls 253 (710)
|++|+|++|++++.+|..++.++ +|++|++++|.+++.+| ..++.++ |++|+++
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~------------------------~~~~~l~-L~~L~Ls 205 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP------------------------PTFANLN-LAFVDLS 205 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECC------------------------GGGGGCC-CSEEECC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCC------------------------hHHhCCc-ccEEECc
Confidence 66666666666666666666665 66666666665555444 4455554 7777777
Q ss_pred cccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccC
Q 005177 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333 (710)
Q Consensus 254 ~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 333 (710)
+|++++.+|..+..+++|+.|++++|.+++.+|. +..+++|++|++++|++++.+|..+..+++|+.|+|++|+++|.+
T Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 7777777777777888888888888888776665 677888999999999998888988999999999999999999888
Q ss_pred CcccCCCCCCcEEeccCCC-CCCC
Q 005177 334 PESLVQLPSLEILFIWNNY-FSGS 356 (710)
Q Consensus 334 p~~~~~l~~L~~L~L~~N~-l~g~ 356 (710)
|.. ..+++|+.|++++|+ +.|.
T Consensus 285 p~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSSEEEST
T ss_pred CCC-ccccccChHHhcCCCCccCC
Confidence 876 788999999999997 6653
No 21
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=372.26 Aligned_cols=248 Identities=20% Similarity=0.222 Sum_probs=189.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc------CCceeEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RHQAYLL 519 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~~~~lv 519 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+..|||
T Consensus 58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 778999999999999985 789999999997532 235668899999999999999999999864 3578999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~- 596 (710)
||||+ |+|.+++.. .+++.....|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 138 mE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~ 213 (398)
T 4b99_A 138 LDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213 (398)
T ss_dssp EECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----
T ss_pred EeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecccCcc
Confidence 99996 789999975 578899999999999999999999 99999999999999999999999999998653211
Q ss_pred -----CCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-cc--------c--------
Q 005177 597 -----GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-ID--------G-------- 653 (710)
Q Consensus 597 -----~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~~--------~-------- 653 (710)
.....++.+|.+||+..+. .++.++||||+||++|||+||+.||.+........ +. .
T Consensus 214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~ 293 (398)
T 4b99_A 214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293 (398)
T ss_dssp --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----
T ss_pred ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh
Confidence 1122356778889987654 56899999999999999999999997543211000 00 0
Q ss_pred cccccccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 LLGEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.........+...+..+. .....+.+++.+|++.||++|||++|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 294 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000000000011111 123567899999999999999999999874
No 22
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.4e-42 Score=367.64 Aligned_cols=196 Identities=14% Similarity=0.151 Sum_probs=165.5
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCce
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 516 (710)
+.+.|. ..+.||+|+||.||+|+. .+++.||||++.... ....+.+|+++|.++ +|||||++++++.+++..
T Consensus 19 l~~~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFK--IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCE--EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEE--EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 445566 788999999999999974 457899999997543 344577899999988 699999999999999999
Q ss_pred eEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCcccccccc
Q 005177 517 YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~ 595 (710)
|+|||||++|+|.++++ .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 96 ~lvmE~~~g~~L~~~~~-~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEEEECCCCCCHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEEEeCCCcccHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999999996 588999999999999999999999 99999999999999976 79999999999754221
Q ss_pred CC------------------------------CCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCC
Q 005177 596 DG------------------------------SFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGS 644 (710)
Q Consensus 596 ~~------------------------------~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~ 644 (710)
.. ....++++|++||+..+. .++.++||||+||++|||+||+.||..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 10 011256778899987654 58899999999999999999999997554
No 23
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7e-42 Score=384.34 Aligned_cols=245 Identities=11% Similarity=0.063 Sum_probs=192.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHH---HHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVS---EFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~---~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+. .++++++.++|||||++++++.+++.
T Consensus 189 ddf~--i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 189 NDFS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred HHeE--EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 3466 778999999999999985 6899999999975321 122233 34667788899999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.|||||||+||+|.++|.. .+++.....|+.||+.||+|||+. +||||||||+|||||.+|++||+|||+|+...
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999999975 578888999999999999999999 99999999999999999999999999998765
Q ss_pred ccCCCCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 594 LADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
........++++|.+||++. +..++.++||||+||++|||+||+.||.+...... ......+.... ...+. .
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~-~~~p~---~ 416 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMA-VELPD---S 416 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCC-CCCCT---T
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCC-CCCCc---c
Confidence 44333444677788899885 45789999999999999999999999974322111 01111111111 11111 1
Q ss_pred HHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
....+.+++.+|++.||++|++ ++||.+
T Consensus 417 ~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 2345778999999999999998 677764
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-40 Score=367.75 Aligned_cols=345 Identities=20% Similarity=0.198 Sum_probs=297.2
Q ss_pred CCceeee--eeeCCCC--------CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccC-CccccCCCCCcE
Q 005177 61 YACSWSG--VKCNKNN--------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLIS 129 (710)
Q Consensus 61 ~~C~w~g--v~C~~~~--------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 129 (710)
..|.|.+ +.|+... ..++.++++++.+.+..|..+.. +++|++|+|++|.+.+.+ |..|.++++|++
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~--l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSR--LQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSS--CTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhcc--CccccEEECcCCcccceECcccccccccCCE
Confidence 4577666 7887532 35788999999999887888877 899999999999998666 456889999999
Q ss_pred EECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchh--ccCCCCCCEEEccCCCCCCCCCcc-cCCCCCCCeEEecC
Q 005177 130 LDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAE--ISQLEHLKVLNLAGSYFSGPIPSQ-FGSFKSLEFLHLAG 206 (710)
Q Consensus 130 L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~--~~~L~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~ 206 (710)
|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|++++..|.. +.++++|++|++++
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTT
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCC
Confidence 999999999988999999999999999999999866665 899999999999999999887876 88999999999999
Q ss_pred CcCCCCCccccccc--ccccccccccccccccCCcc--------ccCCCccchhccccccCCccCchhccC---------
Q 005177 207 NLLNDQIPAELGML--KTVTHMEIGYNFYQGNIPWQ--------LGNMSEVQYLDIAGANLSGSIPKELSN--------- 267 (710)
Q Consensus 207 N~l~~~~p~~l~~l--~~L~~L~l~~n~~~g~~p~~--------l~~l~~L~~L~ls~n~l~g~~p~~l~~--------- 267 (710)
|.+++..|..+..+ .+|+.|+++.|.+.+..+.. +..+++|++|++++|++++.+|..+..
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 99999888888776 67777888877776544432 235577888888888777655543321
Q ss_pred ------------------------------CCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 268 ------------------------------LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 268 ------------------------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
.++|+.|++++|.+++.+|..+..+++|+.|++++|++++..|..|..++
T Consensus 244 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp EECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred EeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 26899999999999999999999999999999999999998899999999
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~ 397 (710)
+|+.|+|++|++++..|..+..+++|++|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|+++
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 99999999999998889999999999999999999998889999999999999999999997555567889999999999
Q ss_pred cCCcccchhH
Q 005177 398 SNNFTGIVMF 407 (710)
Q Consensus 398 ~N~l~g~i~~ 407 (710)
+|++++..|.
T Consensus 404 ~N~l~~~~~~ 413 (455)
T 3v47_A 404 TNPWDCSCPR 413 (455)
T ss_dssp SSCBCCCTTT
T ss_pred CCCcccCCCc
Confidence 9999998873
No 25
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.8e-42 Score=387.13 Aligned_cols=249 Identities=19% Similarity=0.236 Sum_probs=200.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.++|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|+++|++++|||||++++++.+++..|||
T Consensus 155 il~~Y~--i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 445566 778999999999999985 689999999998643 3466788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC--CceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~--~~~kl~DfGla~~~~~ 594 (710)
||||++|+|.+++.. .+++.+...++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999999854 467888999999999999999999 99999999999999854 8999999999987643
Q ss_pred cCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.... ...++++|++||++.+..++.++||||+||++|||++|+.||.+..... .+..+...........+...
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 383 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNMDDSAFSGI 383 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCCCSGGGTTS
T ss_pred CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCCCCCcccccCC
Confidence 2211 1225667889999998899999999999999999999999997543211 11111111101111112223
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+||+.||++|||+.|++++
T Consensus 384 s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 384 SEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 4567789999999999999999999874
No 26
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.6e-40 Score=348.41 Aligned_cols=259 Identities=26% Similarity=0.419 Sum_probs=208.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+..+.|. ..+.||+|+||.||+|...+|..||||++.... ...+.+.+|++++++++|||||+++++|.+++..++|
T Consensus 36 ~~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 36 EATNNFD--HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCCS--CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHHhccC--ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 3455677 788999999999999998889999999987643 3467789999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|||+++|+|.+++.. ..+|.++.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGT 190 (321)
T ss_dssp EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999999964 368999999999999999999998 99999999999999999999999999987643
Q ss_pred ccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-----cc----ccccccccc
Q 005177 594 LADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-----PI----DGLLGEMYN 660 (710)
Q Consensus 594 ~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-----~~----~~~~~~~~~ 660 (710)
..... ...+...|.+||......++.++|||||||++|||+||+.|+......... .. .....+..+
T Consensus 191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (321)
T 2qkw_B 191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270 (321)
T ss_dssp SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred cccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence 22111 112345578889888888999999999999999999999998744322111 00 011222233
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+. .. .....+....+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 271 ~~-~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 271 PN-LA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SS-CT-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hh-hc-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 22 11 1223456678889999999999999999999999998663
No 27
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-40 Score=351.31 Aligned_cols=261 Identities=30% Similarity=0.509 Sum_probs=208.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
..+.|. ..+.||+|+||.||+|...+|+.||||++..... ....+.+|++++++++|||||+++++|.+++..++|
T Consensus 28 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 105 (326)
T 3uim_A 28 ASDNFS--NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 105 (326)
T ss_dssp TTTSSC--STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred Hhhccc--cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence 345677 8899999999999999988899999999986432 244688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|||+++|+|.++++. .++|..+..|+.|+++||+|||+.+.++|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185 (326)
T ss_dssp EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence 999999999999975 27899999999999999999999888899999999999999999999999999998654
Q ss_pred ccCCC---CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC-----CCC--Ccccc----cccccccc
Q 005177 594 LADGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG-----SSL--QNKPI----DGLLGEMY 659 (710)
Q Consensus 594 ~~~~~---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~-----~~~--~~~~~----~~~~~~~~ 659 (710)
..... ...++..|.+||......++.++|||||||++|||+||+.|+... ... ..|.. ........
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (326)
T 3uim_A 186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV 265 (326)
T ss_dssp SSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSS
T ss_pred cccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhc
Confidence 32221 111345577889888888899999999999999999999998611 100 01110 01112222
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.. . ......+....+.+++.+||+.||++|||+.||+++|++..
T Consensus 266 ~~~-~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 266 DVD-L-QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp CTT-C-TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred Chh-h-ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 222 1 12234566788999999999999999999999999998654
No 28
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-40 Score=352.64 Aligned_cols=257 Identities=18% Similarity=0.254 Sum_probs=198.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----ceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|... |+.||||++.........+..|+.++++++|||||++++++.+.. ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 7789999999999999874 899999999876656666777999999999999999999998754 36999999999
Q ss_pred CChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-------CCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 526 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 526 gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|+|.++++. ..+|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.......
T Consensus 107 g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~ 186 (322)
T 3soc_A 107 GSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186 (322)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC
T ss_pred CCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC
Confidence 999999975 5789999999999999999999862 35899999999999999999999999999976543221
Q ss_pred C----CcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccc----------ccccc
Q 005177 598 S----FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG----------LLGEM 658 (710)
Q Consensus 598 ~----~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~----------~~~~~ 658 (710)
. ...++..|.+||.... ..++.++|||||||++|||+||+.|+.+.......+... .....
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (322)
T 3soc_A 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266 (322)
T ss_dssp CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH
T ss_pred ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh
Confidence 1 1123455778887765 356678899999999999999999987543321111110 00000
Q ss_pred ccccccC-CCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 659 YNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 659 ~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
....... ... ........+.+++.+||+.||++|||+.||++.|+.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111000 011 112344568899999999999999999999999998864
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.7e-40 Score=336.81 Aligned_cols=249 Identities=17% Similarity=0.246 Sum_probs=200.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||.++......+.+.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 67889999999999999888889999999876666778999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---Ccccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~~~~~ 603 (710)
+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 92 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 168 (268)
T 3sxs_A 92 NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168 (268)
T ss_dssp HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcC
Confidence 99965 478999999999999999999998 9999999999999999999999999998765322111 11122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||+|+++|||+| |+.|+........ ...+........+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~l~~li~ 239 (268)
T 3sxs_A 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKVSQGHRLYRPHL---ASDTIYQIMY 239 (268)
T ss_dssp GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------HHHHHcCCCCCCCCc---ChHHHHHHHH
Confidence 34678888888788999999999999999999 8888763321110 011111110111111 1235678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccCCCCC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLKPHGK 710 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~~~~~ 710 (710)
+|++.||++|||+.|+++.|+.+++.-|
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999987543
No 30
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=340.55 Aligned_cols=247 Identities=18% Similarity=0.271 Sum_probs=197.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc-chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|..||+|++... ....+.+.+|++++++++|||||++++++.+++..++||||+++|+
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 678899999999999986 67999999998653 3346788999999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC------
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS------ 598 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~------ 598 (710)
|.+++.. ..+|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 94 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 170 (310)
T 3s95_A 94 LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170 (310)
T ss_dssp HHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----------
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccc
Confidence 9999965 568999999999999999999998 9999999999999999999999999999765322111
Q ss_pred ----------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 599 ----------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 599 ----------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
...++..|.+||......++.++|||||||++|||++|..|+.......... ........+.. . +.
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~--~~ 246 (310)
T 3s95_A 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRY-C--PP 246 (310)
T ss_dssp ---------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-SBCHHHHHHHT-C--CT
T ss_pred ccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-hhhhhcccccc-C--CC
Confidence 1123455778898888889999999999999999999998876432211100 00011111111 0 00
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.....+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 247 ---~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 247 ---NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11134668889999999999999999999998875
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.1e-40 Score=341.35 Aligned_cols=247 Identities=15% Similarity=0.221 Sum_probs=197.6
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++..++..++||
T Consensus 19 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBC--CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhcee--eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 34566 778999999999999984 7899999999976432 3567889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 521 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 99999999999976 578899999999999999999999 9999999999999999999999999998765432221
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...++..|.+||......++.++|||||||++|||+||+.||.......... .+.... .............+
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~ 246 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNG-TPELQNPEKLSAIF 246 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHHC-SCCCSCGGGSCHHH
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCC-CCCCCCccccCHHH
Confidence 1224555788898888889999999999999999999999986433211100 000000 00001111223456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||+.|++++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999863
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.8e-40 Score=338.18 Aligned_cols=248 Identities=20% Similarity=0.280 Sum_probs=200.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 66889999999999999888999999999877666778999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCcccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 603 (710)
+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 94 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 170 (269)
T 4hcu_A 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170 (269)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccc
Confidence 99965 368999999999999999999998 99999999999999999999999999997653211 1111122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||+||++|||+| |+.|+....... ....+........+.. ....+.+++.
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~li~ 241 (269)
T 4hcu_A 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPRL---ASTHVYQIMN 241 (269)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcCccCCCCCc---CCHHHHHHHH
Confidence 34778898888889999999999999999999 788876432110 1111111110111111 1245678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccCCCC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLKPHG 709 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~~~~ 709 (710)
+|++.||++|||+.|++++|+++.+.|
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~g 268 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAESG 268 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHcc
Confidence 999999999999999999999887654
No 33
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.5e-39 Score=373.31 Aligned_cols=323 Identities=21% Similarity=0.253 Sum_probs=290.8
Q ss_pred CcEEEEEcCCCCCccc-----------------CCcchh--hhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 75 TIVVGINLSMKGLSGA-----------------LPGKPL--RIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~-----------------~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
.....++++.+.++|. +|..++ . +++|++|+|++|.+.|.+|..|+++++|++|+|++|
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~--l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN--LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG--CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcc--cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 3578899999999996 999988 7 999999999999999999999999999999999999
Q ss_pred C-CCC-CCChhhcCC------CCCCEEECCCCCCCcCCch--hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 136 N-FSG-HFPGGIQSL------RNLLVLDAFSNSFSGSVPA--EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 136 ~-l~~-~~p~~l~~L------~~L~~L~L~~N~l~~~~p~--~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
+ ++| .+|..++.+ ++|++|++++|+++ .+|. .++++++|++|+|++|+++|.+| .|+++++|++|+++
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 8 999 899999887 99999999999999 8998 99999999999999999999999 89999999999999
Q ss_pred CCcCCCCCccccccccc-ccccccccccccccCCccccCCC--ccchhccccccCCccCchhcc-------CCCCCcEEE
Q 005177 206 GNLLNDQIPAELGMLKT-VTHMEIGYNFYQGNIPWQLGNMS--EVQYLDIAGANLSGSIPKELS-------NLTKLESLF 275 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l~~-L~~L~l~~n~~~g~~p~~l~~l~--~L~~L~ls~n~l~g~~p~~l~-------~l~~L~~L~ 275 (710)
+|.++ .+|..+..+++ |++|++++|.++ .+|..++.++ +|++|++++|++++.+|..+. .+++|+.|+
T Consensus 362 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~ 439 (636)
T 4eco_A 362 YNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSIN 439 (636)
T ss_dssp SSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEE
T ss_pred CCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEE
Confidence 99998 89999999999 999999999998 8888887765 899999999999999998888 788999999
Q ss_pred ccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccc-cCC-------CCCCEEEcccccCcccCCcccC--CCCCCcE
Q 005177 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESF-ADL-------KNLRLLSLMYNEMSGTVPESLV--QLPSLEI 345 (710)
Q Consensus 276 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l-------~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~ 345 (710)
+++|.++...+..+..+++|+.|+|++|+++ .+|..+ ..+ ++|+.|+|++|+++ .+|..+. .+++|+.
T Consensus 440 Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~ 517 (636)
T 4eco_A 440 LSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVG 517 (636)
T ss_dssp CCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCE
T ss_pred CcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCE
Confidence 9999999544445567899999999999999 566543 332 28999999999999 6888887 8999999
Q ss_pred EeccCCCCCCCCCcccCCCCCCcEEEC------CCCcCCccCcccccCCCceeeEecccCCcccchhH
Q 005177 346 LFIWNNYFSGSLPENLGRNSKLRWVDV------STNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 346 L~L~~N~l~g~~p~~l~~~~~L~~L~l------s~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
|+|++|++++ +|..+..+++|+.|++ ++|++.+.+|..++.+++|+.|++++|++ +.+|.
T Consensus 518 L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~ 583 (636)
T 4eco_A 518 IDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNE 583 (636)
T ss_dssp EECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred EECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCH
Confidence 9999999997 8999999999999999 56888999999999999999999999999 66663
No 34
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.9e-39 Score=348.10 Aligned_cols=244 Identities=21% Similarity=0.266 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|.. .++..||||.++... ...+.+.+|+++++++ +|||||+++++|.+++..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 668899999999999974 346689999998643 2356789999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCCC
Confidence 9999999999999964 257889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++........ .......|.+||+.....++.++|||||||++|||+| |+.|+.+... .. ..
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-~~-----~~ 315 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EE-----LF 315 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GG-----HH
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-HH-----HH
Confidence 999999999865432111 1112344778898888889999999999999999999 8888764321 11 11
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+........+. .....+.+++.+||+.||++||++.|+++.|+.+
T Consensus 316 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 316 KLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHHHTTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111111011111 1234577889999999999999999999999876
No 35
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-39 Score=342.54 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=190.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. +|+.||||.+.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 678899999999999986 78899999997643 23567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 527 NLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 527 sL~~~l~~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
+|.+++... .++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.......
T Consensus 120 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 999999752 78889999999999999999998 6 99999999999999999999999999976433211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccc-cccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY-NENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 676 (710)
....++..|.+||......++.++|||||||++|||+||+.||........ ...+. .......+. .....
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~ 267 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV------VAAVGFKCKRLEIPR---NLNPQ 267 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH------HHHHHHSCCCCCCCT---TSCHH
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhcCCCCCCCc---cCCHH
Confidence 112244557888988888889999999999999999999999864321110 00000 000001111 12245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 6789999999999999999999999987643
No 36
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.2e-39 Score=338.67 Aligned_cols=252 Identities=18% Similarity=0.226 Sum_probs=188.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHh--ccCCCCceeEEEEEEcC----Ccee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYNR----HQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~~~~ 517 (710)
+.|. ..+.||+|+||.||+|.. +|+.||||++.... .+.+.+|.+++. +++||||+++++++... +..+
T Consensus 8 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 8 RDIT--LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGCE--EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred CcEE--EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 3455 778999999999999987 79999999997543 334445555554 48999999999997653 4589
Q ss_pred EEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 518 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
+||||+++|+|.++++. ..++..+.+++.|+++||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999975 5789999999999999999999 65 999999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhC----------CCCCCCCCCC
Q 005177 589 KYLTQLADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSL 646 (710)
Q Consensus 589 a~~~~~~~~~------~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg----------~~p~~~~~~~ 646 (710)
++........ ...++..|.+||..... .++.++|||||||++|||+|| +.|+......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8765322111 11244557788877655 455789999999999999999 6666532211
Q ss_pred Ccccccccccccc--cccccCCCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 647 QNKPIDGLLGEMY--NENEVGSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 647 ~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.. ... ...... +......+. ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 240 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DP-SFE-DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SC-CHH-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Cc-chh-hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11 000 000000 000001111 1123556788999999999999999999999999876
No 37
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-38 Score=362.91 Aligned_cols=329 Identities=22% Similarity=0.227 Sum_probs=222.4
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSN--FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCcCEEECCCCCcCEeChhhccC--CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 45889999999999887778877 8999999999999998888899999999999999999999889999999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccc-----------
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT----------- 222 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~----------- 222 (710)
+|++|.+++..|..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECT
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeecc
Confidence 999999998777889999999999999999986 67999999999999999999887765554433332
Q ss_pred ----------------cccccccccccc----------------------------------------------------
Q 005177 223 ----------------VTHMEIGYNFYQ---------------------------------------------------- 234 (710)
Q Consensus 223 ----------------L~~L~l~~n~~~---------------------------------------------------- 234 (710)
|+.|++++|.+.
T Consensus 190 ~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 222222222111
Q ss_pred --------------------------------------------------ccCCc--------------------cccCC
Q 005177 235 --------------------------------------------------GNIPW--------------------QLGNM 244 (710)
Q Consensus 235 --------------------------------------------------g~~p~--------------------~l~~l 244 (710)
+.+|. .++.+
T Consensus 270 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp CCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred ccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccC
Confidence 11110 12244
Q ss_pred CccchhccccccCCcc--CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCC-ccccCCCCCCE
Q 005177 245 SEVQYLDIAGANLSGS--IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRL 321 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g~--~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 321 (710)
++|++|++++|++++. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 5566666666666544 35556666666666666666554 33445555555555555555555444 44555555555
Q ss_pred EEcccccCcccCCcccCCCCCCcEEeccCCCCCC-CCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCC
Q 005177 322 LSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 322 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~ 400 (710)
|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 5555555555555555555555555555555554 245555555555555555555555555555555555555555555
Q ss_pred cccchh
Q 005177 401 FTGIVM 406 (710)
Q Consensus 401 l~g~i~ 406 (710)
+++.+|
T Consensus 509 l~~~~~ 514 (606)
T 3vq2_A 509 LLFLDS 514 (606)
T ss_dssp CSCEEG
T ss_pred CCCcCH
Confidence 555443
No 38
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-40 Score=345.52 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=198.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.|. ..+.||+|+||.||+|.. .+|..||+|.+.........+.+|++++++++|||||++++++.+.+..++||||
T Consensus 5 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceE--eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4455 678899999999999985 5789999999987666677789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCceEEcccCccccccccCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~ 597 (710)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999999975 468899999999999999999998 9999999999999997 78999999999976543211
Q ss_pred C-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 S-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
. ...+.++|.+||......++.++||||+||++|||+||+.||.+..... ....+...........+.+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCCCHHHHTTSCHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHcCCCCCChhhhccCCHH
Confidence 1 1124455778898887778899999999999999999999986433211 11111111101101111223456
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 7899999999999999999999874
No 39
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.6e-39 Score=356.24 Aligned_cols=245 Identities=17% Similarity=0.268 Sum_probs=198.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++|||||++++++. .+..++|||||++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 66889999999999999988999999999876666788999999999999999999999986 56789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~ 602 (710)
++++. ..++....+++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 347 (454)
T 1qcf_A 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347 (454)
T ss_dssp HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSS
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcc
Confidence 99974 578889999999999999999998 99999999999999999999999999998653211 111112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 418 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRALERGYRMPRPE---NCPEELYNIM 418 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHHTCCCCCCT---TSCHHHHHHH
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 233677888888889999999999999999999 888886432111 011111111011111 1234577899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+||+.||++||||+++++.|+.+..
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998854
No 40
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=341.96 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... .+..||||+++.. ....+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 6789999999999999862 4557999999864 234667899999999999999999999999999999999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC-
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 599 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~- 599 (710)
++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 99999999964 578999999999999999999998 99999999999999999999999999998654322111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
...+..|.+||......++.++|||||||++|||++ |+.|+....... ....+........+. ...
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~ 280 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVEEGYRLPAPM---GCP 280 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHHTTCCCCCCT---TCC
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHcCCCCCCCC---CcC
Confidence 112234778888888888999999999999999999 888886432111 011111111011111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 45778999999999999999999999998774
No 41
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.5e-39 Score=342.52 Aligned_cols=242 Identities=17% Similarity=0.209 Sum_probs=194.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 16 ~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 16 NYR--LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 355 778999999999999986 789999999997642 23566889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999999999854 678889999999999999999998 999999999999999999999999999976542211
Q ss_pred CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
....++.+|.+||...+..+ +.++||||+||++|||+||+.||.+..... ....+.... ...+.. ....
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~~ 240 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE------LRERVLRGK-YRIPFY---MSTD 240 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCHH
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHH
Confidence 11224556888898877665 478999999999999999999987432110 111111111 111111 1245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+++.+|++.||++|||++|++++
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 6788999999999999999999864
No 42
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.5e-39 Score=348.86 Aligned_cols=248 Identities=19% Similarity=0.276 Sum_probs=189.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.|. ..+.||+|+||.||+|... ++..||||+++.. ....+.+.+|++++++++|||||+++|+|.+.+..++
T Consensus 46 ~~~--~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 46 NIS--IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GCC--CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hce--eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 455 7789999999999999864 5778999999864 2345678999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999975 478999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCCC---c--ccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcc
Q 005177 596 DGSF---P--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 669 (710)
Q Consensus 596 ~~~~---~--~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (710)
.... . .....|.+||+.....++.++|||||||++|||++ |+.|+....... ....+........+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~------~~~~i~~~~~~~~~~- 273 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPM- 273 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH------HHHHHHTTEECCCCT-
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCc-
Confidence 1111 0 11234778898888889999999999999999998 888886432110 011111110011111
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+....+.+++.+||+.||++||+|.|+++.|+.+.
T Consensus 274 --~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 274 --DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp --TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 12345778999999999999999999999998763
No 43
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=345.95 Aligned_cols=247 Identities=16% Similarity=0.213 Sum_probs=192.1
Q ss_pred hhhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 440 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 440 ~~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
+++.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 6 ~~l~~~y~--i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~ 83 (347)
T 3zgw_A 6 DELLKYYE--LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKI 83 (347)
T ss_dssp TTTTTTEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhcCeE--EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 34455566 788999999999999984 789999999997643 2355788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
++||||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 999999999999999854 678999999999999999999998 999999999999999999999999999876432
Q ss_pred cCC---CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 595 ADG---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 595 ~~~---~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
... ....++.+|.+||...+..+ +.++||||+||++|||+||+.||.+..... ....+.... ...+..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~- 232 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA------LYKKIMRGK-YDVPKW- 232 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-CCCCTT-
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCC-CCCCCC-
Confidence 211 11224556788888876664 889999999999999999999987432111 111111111 111111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+.+++.+|++.||++|||++|+++.
T Consensus 233 --~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 233 --LSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 12456688999999999999999999864
No 44
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.8e-40 Score=353.67 Aligned_cols=246 Identities=18% Similarity=0.214 Sum_probs=195.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||+++|+|.+++..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 668899999999999997 479999999997542 23456889999999999999999999999999999999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC----CCC
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSF 599 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~----~~~ 599 (710)
+|.++++. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~ 274 (377)
T 3cbl_A 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274 (377)
T ss_dssp BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCC
Confidence 99999975 478999999999999999999998 99999999999999999999999999987543211 011
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
......+.+||......++.++|||||||++|||+| |+.|+........ ...+........+.. ....+.
T Consensus 275 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~l~ 345 (377)
T 3cbl_A 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT------REFVEKGGRLPCPEL---CPDAVF 345 (377)
T ss_dssp CEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH------HHHHHTTCCCCCCTT---CCHHHH
T ss_pred CCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHHcCCCCCCCCC---CCHHHH
Confidence 112233678888887888999999999999999999 8888764321110 000000100111111 123567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+++.+||+.||++|||++|+++.|+++++
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 88999999999999999999999998754
No 45
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.8e-39 Score=339.09 Aligned_cols=242 Identities=15% Similarity=0.223 Sum_probs=194.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++..++..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 456899999999999986 4799999999986433 35678899999999999999999999999999999999999999
Q ss_pred hhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cccccc
Q 005177 528 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPAKIA 604 (710)
Q Consensus 528 L~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~ 604 (710)
|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...++.
T Consensus 129 L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 205 (321)
T 2c30_A 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 205 (321)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCc
Confidence 9999876 678999999999999999999998 9999999999999999999999999998765432111 122445
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhc
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 684 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 684 (710)
.|.+||......++.++|||||||++|||+||+.|+........ ...+.+.. .............+.+++.+|
T Consensus 206 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA------MKRLRDSP-PPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSS-CCCCTTGGGSCHHHHHHHHHH
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCC-CCCcCccccCCHHHHHHHHHH
Confidence 57788988888889999999999999999999999874332110 01111111 000011111234567888999
Q ss_pred CCCCCCCCCCHHHHHHH
Q 005177 685 TRSTPSDRPSMEEALKL 701 (710)
Q Consensus 685 l~~~p~~RPs~~evl~~ 701 (710)
++.||++|||+.|+++.
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999874
No 46
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.7e-39 Score=345.41 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=197.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
++.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.+
T Consensus 9 ~~~~~y~--~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 9 KVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ChhhceE--EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence 4445566 778999999999999985 5799999999986432 24678999999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEccc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 586 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~Df 586 (710)
++..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999999965 568899999999999999999998 999999999999998876 7999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
|+++....... ....+++.|.+||+.....++.++||||+||++|||++|+.||.+..... ....+.......
T Consensus 164 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~ 237 (361)
T 2yab_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITAVSYDF 237 (361)
T ss_dssp SSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCC
T ss_pred CCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCCC
Confidence 99986543221 12225566888898888889999999999999999999999987432211 111111111000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+......+.+++.+|+..||++|||+.|+++
T Consensus 238 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 238 DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111122346778999999999999999999985
No 47
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.8e-39 Score=332.59 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=195.8
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 67899999999999999988999999999976666778999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCcccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 603 (710)
+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 108 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 184 (283)
T 3gen_A 108 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 184 (283)
T ss_dssp HHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSC
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccC
Confidence 99965 578999999999999999999998 99999999999999999999999999997653211 1111123
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||+||++|||+| |+.|+....... ....+........+... ...+.+++.
T Consensus 185 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~l~~li~ 255 (283)
T 3gen_A 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYRPHLA---SEKVYTIMY 255 (283)
T ss_dssp GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTCCCCCCTTC---CHHHHHHHH
T ss_pred cccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH------HHHHHhcccCCCCCCcC---CHHHHHHHH
Confidence 34778898888889999999999999999999 888876432111 01111111101111111 245678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+||+.||++|||++|+++.|+++.
T Consensus 256 ~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 256 SCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHh
Confidence 999999999999999999998763
No 48
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.3e-39 Score=358.69 Aligned_cols=246 Identities=20% Similarity=0.230 Sum_probs=197.9
Q ss_pred hhhhhcCCCCCccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|... ++..||||.++......+.|.+|++++++++|||||+++|+|.+++..++|||||++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 6688999999999999874 589999999987666678899999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---CCcc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPA 601 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~~~ 601 (710)
.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 304 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 380 (495)
T 1opk_A 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 380 (495)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCC
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCc
Confidence 999964 468899999999999999999998 999999999999999999999999999986532211 1111
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
....+.+||......++.++|||||||++|||+| |+.|+.+..... . ...+........+. .....+.++
T Consensus 381 ~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~----~~~~~~~~~~~~~~---~~~~~l~~l 451 (495)
T 1opk_A 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V----YELLEKDYRMERPE---GCPEKVYEL 451 (495)
T ss_dssp CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H----HHHHHTTCCCCCCT---TCCHHHHHH
T ss_pred CCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHHcCCCCCCCC---CCCHHHHHH
Confidence 2233677888888888999999999999999999 777776432111 0 01111110011111 122456788
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
+.+||+.||++||||.|+++.|+.+..
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998754
No 49
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.4e-38 Score=329.30 Aligned_cols=258 Identities=23% Similarity=0.379 Sum_probs=201.7
Q ss_pred hhhhhcCCchhh------hhhcCCCCCccEEEEcCCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEE
Q 005177 440 NDVLRSFNSTEC------EEAARPQSAAGCKAVLPTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLG 508 (710)
Q Consensus 440 ~~~~~~~~~~~~------~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g 508 (710)
..+++.|+ .. +.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++++++||||+++++
T Consensus 21 ~~~~~~f~--~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 97 (307)
T 2nru_A 21 KNVTNNFD--ERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97 (307)
T ss_dssp HHHTTTTC--CSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHHHcccc--cccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 34555566 44 7899999999999987 68899999997532 23567899999999999999999999
Q ss_pred EEEcCCceeEEEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 509 FCYNRHQAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 509 ~~~~~~~~~lv~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
++.+.+..++||||+++|+|.+++.. ..+|..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 98 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl 174 (307)
T 2nru_A 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 174 (307)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEE
Confidence 99999999999999999999999863 478999999999999999999998 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-c------
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D------ 652 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~------ 652 (710)
+|||+++........ ...+...+.+||...+ .++.++|||||||++|||+||+.|+........... .
T Consensus 175 ~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 253 (307)
T 2nru_A 175 SDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253 (307)
T ss_dssp CCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTT
T ss_pred eecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhh
Confidence 999998765432111 1123444677787654 478899999999999999999999875432211000 0
Q ss_pred -ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 653 -GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 653 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+....++. . ..........+.+++.+||+.||++|||+.|++++|++++.
T Consensus 254 ~~~~~~~~~~~-~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 254 EKTIEDYIDKK-M--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCCHHHHSCSS-C--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhcccc-c--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 0011112221 1 12234456678899999999999999999999999998864
No 50
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8.1e-38 Score=355.21 Aligned_cols=338 Identities=22% Similarity=0.274 Sum_probs=242.0
Q ss_pred CceeeeeeeCCCC-----------CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEE
Q 005177 62 ACSWSGVKCNKNN-----------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISL 130 (710)
Q Consensus 62 ~C~w~gv~C~~~~-----------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 130 (710)
.|.|.|+ |+... ..++.++++++.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRA--CANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSS--CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhc--CCcccEEECCCCCcCccChhhccccccCCEE
Confidence 5889888 86431 25889999999999887877877 8999999999999998888899999999999
Q ss_pred ECcCCCCCCCCChhhcCCCCCCEEECCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCc
Q 005177 131 DISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNL 208 (710)
Q Consensus 131 ~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~ 208 (710)
+|++|.+++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..|.++++|++|++++|.
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 999999998888889999999999999999987 467889999999999999998555555 578899999999999999
Q ss_pred CCCCCccccccc------------------------cccccccccccccccc----------------------------
Q 005177 209 LNDQIPAELGML------------------------KTVTHMEIGYNFYQGN---------------------------- 236 (710)
Q Consensus 209 l~~~~p~~l~~l------------------------~~L~~L~l~~n~~~g~---------------------------- 236 (710)
+++.+|..++.+ ++|++|++++|.+++.
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred ccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 988877776554 4455555555555441
Q ss_pred --------------------------------------------------------------------------------
Q 005177 237 -------------------------------------------------------------------------------- 236 (710)
Q Consensus 237 -------------------------------------------------------------------------------- 236 (710)
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence
Q ss_pred -----CCccc-cCCCccchhccccccCCccCch---hccCCCCCcEEEccccccCCCCC--ccccCCCCCCEEEccCCCC
Q 005177 237 -----IPWQL-GNMSEVQYLDIAGANLSGSIPK---ELSNLTKLESLFLFRNQLAGQVP--WEFSRVTTLKSLDLSDNRL 305 (710)
Q Consensus 237 -----~p~~l-~~l~~L~~L~ls~n~l~g~~p~---~l~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~N~l 305 (710)
+|..+ .++++|++|++++|++++.+|. .++.+++|+.|++++|++++..+ ..+..+++|++|++++|++
T Consensus 320 n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp SCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred CccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 11111 2355566666666666654432 24556666666666666654321 3356666777777777776
Q ss_pred CCCCCccccCCCCCCEEEcccccCcccCCccc------------------CCCCCCcEEeccCCCCCCCCCcccCCCCCC
Q 005177 306 SGPIPESFADLKNLRLLSLMYNEMSGTVPESL------------------VQLPSLEILFIWNNYFSGSLPENLGRNSKL 367 (710)
Q Consensus 306 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~------------------~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L 367 (710)
+ .+|..+..+++|++|++++|++++ +|..+ ..+++|++|+|++|+++ .+|. ...+++|
T Consensus 400 ~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L 475 (549)
T 2z81_A 400 H-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVL 475 (549)
T ss_dssp C-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTC
T ss_pred c-cCChhhcccccccEEECCCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccC
Confidence 6 466666666666666666666552 22211 24566666666666666 4554 3456677
Q ss_pred cEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 368 RWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 368 ~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+.|++++|++++.+|..+..++.|+.|++++|.+++..|
T Consensus 476 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 476 LVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 777777777776666666677777777777777777665
No 51
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=338.43 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=197.3
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
++.+.|. ..+.||+|+||.||+|.. .+|..||||.+..... ..+.+.+|++++++++|||||++++++.+
T Consensus 8 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 8 NVDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85 (326)
T ss_dssp CHHHHEE--EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CcccceE--eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3444566 778999999999999986 5799999999986422 25678999999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEccc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 586 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~Df 586 (710)
++..++||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999999975 468899999999999999999998 999999999999999887 7999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
|+++....... ....++..|.+||......++.++|||||||++|||+||+.|+.+..... ....+.......
T Consensus 163 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~ 236 (326)
T 2y0a_A 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYEF 236 (326)
T ss_dssp TTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHTCCCC
T ss_pred CCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHhcCCCc
Confidence 99987643221 12224555788898888889999999999999999999999986432111 001111101000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000111223457789999999999999999999874
No 52
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.9e-38 Score=350.84 Aligned_cols=242 Identities=19% Similarity=0.232 Sum_probs=193.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-ceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|.. .|+.||||.++... ..+.+.+|++++++++|||||+++++|.+.+ ..++|||||++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 668899999999999987 47899999998654 5667899999999999999999999988765 78999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ....
T Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~ 350 (450)
T 1k9a_A 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPV 350 (450)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------CCCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC-CCCc
Confidence 999975 258889999999999999999998 99999999999999999999999999998543222111 1223
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
.+.+||......++.++|||||||++|||+| |+.|+....... ....+........+. .....+.+++.+
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l~~li~~ 421 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAPD---GCPPAVYDVMKN 421 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT------HHHHHHTTCCCCCCT---TCCHHHHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---cCCHHHHHHHHH
Confidence 4678888888889999999999999999999 888886432211 111111111011111 122456788999
Q ss_pred cCCCCCCCCCCHHHHHHHHhccC
Q 005177 684 CTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
||+.||++|||+.|+++.|+.+.
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHH
Confidence 99999999999999999998875
No 53
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.1e-39 Score=335.20 Aligned_cols=252 Identities=17% Similarity=0.279 Sum_probs=192.7
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||+++++|... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 678899999999999973 5789999999986433 356789999999999999999999999664 46899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170 (295)
T ss_dssp CCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--------
T ss_pred eCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce
Confidence 9999999999965 478999999999999999999998 9999999999999999999999999999865432111
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCC---------CCcccc-cccccccccccc
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS---------LQNKPI-DGLLGEMYNENE 663 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~---------~~~~~~-~~~~~~~~~~~~ 663 (710)
...+..++.+||......++.++|||||||++|||+||..|+..... ...... ............
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (295)
T 3ugc_A 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250 (295)
T ss_dssp -----CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCc
Confidence 11133346788888888899999999999999999999888752110 000000 000001111110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...+. .....+.+++.+||+.||++|||+.|+++.|+.+++
T Consensus 251 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 251 LPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp CCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCc---CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11111 223457789999999999999999999999988753
No 54
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=342.38 Aligned_cols=242 Identities=19% Similarity=0.149 Sum_probs=189.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++|||||++++++.+++..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 457899999999999985 679999999998653 346778999999999999999999999999999999999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe--cCCCceEEcccCccccccccCCC-Ccc
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENMEPHLAEFGFKYLTQLADGS-FPA 601 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl--~~~~~~kl~DfGla~~~~~~~~~-~~~ 601 (710)
|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++........ ...
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 9998854 478999999999999999999998 99999999999999 56789999999999865432211 122
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
++..|.+||+.....++.++|||||||++|||+||+.||.+..... ....+....+......+......+.+++
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~li 323 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRWDLEDEEFQDISEEAKEFI 323 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCSCSGGGTTSCHHHHHHH
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccCCCChhhhccCCHHHHHHH
Confidence 4556788898888888999999999999999999999987443211 0111111110111111122235677899
Q ss_pred hhcCCCCCCCCCCHHHHHH
Q 005177 682 LLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~ 700 (710)
.+|++.||++|||+.|+++
T Consensus 324 ~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 324 SKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhhCCCHHHHhc
Confidence 9999999999999999987
No 55
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.9e-39 Score=329.74 Aligned_cols=247 Identities=21% Similarity=0.226 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .|..||||.++.... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 678999999999999997 489999999875422 24678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--------CCceEEcccCcccccccc
Q 005177 525 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------NMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 525 ~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--------~~~~kl~DfGla~~~~~~ 595 (710)
+|+|.+++.. ..++.....++.|+++||+|||+....+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 90 ~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~ 169 (271)
T 3dtc_A 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169 (271)
T ss_dssp TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence 9999999865 5789999999999999999999983334999999999999986 678999999999765433
Q ss_pred CCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 596 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 596 ~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
......+...+.+||......++.++||||||+++|||+||+.|+........ .......... ...+. ....
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~---~~~~~---~~~~ 241 (271)
T 3dtc_A 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AYGVAMNKLA---LPIPS---TCPE 241 (271)
T ss_dssp ------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHTSCCC---CCCCT---TCCH
T ss_pred cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHhhhcCCCC---CCCCc---ccCH
Confidence 22222344557788988888899999999999999999999999874321110 0000000000 00011 1124
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+.+++.+|++.||++|||+.|++++|+++
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 577889999999999999999999999865
No 56
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.6e-39 Score=333.08 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=195.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+... ....+.+.+|++.+.+++||||+++++++.+++..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 778999999999999985 67899999998653 2235678899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC---C
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---F 599 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---~ 599 (710)
+|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 95 g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 171 (294)
T 4eqm_A 95 GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171 (294)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCc
Confidence 9999999975 578999999999999999999998 9999999999999999999999999999765432111 1
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++..|.+||......++.++||||+||++|||+||+.||.+...... ... .............. .+....+.+
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~-~~~~~~~~~~~~~~---~~~~~~l~~ 246 (294)
T 4eqm_A 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-AIK-HIQDSVPNVTTDVR---KDIPQSLSN 246 (294)
T ss_dssp ---CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-HHH-HHSSCCCCHHHHSC---TTSCHHHHH
T ss_pred cccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHH-HhhccCCCcchhcc---cCCCHHHHH
Confidence 1244557888988888889999999999999999999999875432110 000 00000000000000 112245678
Q ss_pred HHhhcCCCCCCCCC-CHHHHHHHHhccCC
Q 005177 680 VALLCTRSTPSDRP-SMEEALKLLSGLKP 707 (710)
Q Consensus 680 l~~~Cl~~~p~~RP-s~~evl~~L~~~~~ 707 (710)
++.+|++.||++|| +++++.+.|+.+..
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 89999999999998 89999999987753
No 57
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=342.61 Aligned_cols=245 Identities=16% Similarity=0.169 Sum_probs=192.5
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .++..||||+++.. ......+.+|+.++++++|||||++++++.+++..++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 678899999999999984 35779999999753 2345578889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ceEEcccCcc
Q 005177 522 YLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFK 589 (710)
Q Consensus 522 y~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla 589 (710)
|+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999964 368899999999999999999999 999999999999999555 5999999999
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+....... ....++..|.+||......++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~------~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCC
Confidence 75432211 11123445778898888889999999999999999998 888876432110 11111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+. .....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 306 ~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 306 DPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1111 11245678999999999999999999999998764
No 58
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=347.55 Aligned_cols=250 Identities=17% Similarity=0.136 Sum_probs=196.5
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 8 ~~~~~Y~--i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQ--LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEE--EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred cccCCeE--EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 4455566 778999999999999984 789999999998643 2356688999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~kl~DfGla~~ 591 (710)
++||||+++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999998865 568889999999999999999999 999999999999998 457899999999976
Q ss_pred ccccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 669 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (710)
....... ...++.+|.+||......++.++||||+||++|||++|+.||.+..... ....+.........+.
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~ 236 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR------LYQQIKAGAYDFPSPE 236 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTCCCCCTTT
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhCCCCCCccc
Confidence 5432211 1224566888999888889999999999999999999999986433211 0111111110011111
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 237 WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 12233567789999999999999999999873
No 59
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.2e-38 Score=331.88 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=192.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.+.|. ..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..+
T Consensus 18 ~l~~~y~--~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 18 GLMEKYQ--KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp CSSCEEE--EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred chHhhhH--hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 3455666 7889999999999999988899999999975432 2467889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
+||||++ |+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 96 LVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 9999998 588888765 368889999999999999999998 999999999999999999999999999986542
Q ss_pred cCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------cccccccc
Q 005177 595 ADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLG 656 (710)
Q Consensus 595 ~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~ 656 (710)
.... ...+..+|.+||.... ..++.++||||+||++|||+||+.||.+...... |.......
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 2211 1123455778887755 5679999999999999999999999874332211 00000000
Q ss_pred ccccccc-cCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 EMYNENE-VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ~~~~~~~-~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+... ....... .....++.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000 0000001 1123467899999999999999999999874
No 60
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.3e-38 Score=336.16 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=194.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 6 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 6 DFD--YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 355 678999999999999985 579999999998642 2356688899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999865 568889999999999999999998 999999999999999999999999999975322211
Q ss_pred --CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 598 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 598 --~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
....++..|.+||......++.++||||+||++|||+||+.||.+..... ....+.... ...+.. ...
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~ 230 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-IRFPRT---LSP 230 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCH
Confidence 12224556788898888889999999999999999999999986432110 111111111 111111 224
Q ss_pred HHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
.+.+++.+|++.||++|| +++|++++
T Consensus 231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 567888999999999999 89998764
No 61
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.4e-37 Score=365.54 Aligned_cols=321 Identities=20% Similarity=0.256 Sum_probs=276.7
Q ss_pred CcEEEEEcCCCCCcc-----------------cCCcchh--hhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 75 TIVVGINLSMKGLSG-----------------ALPGKPL--RIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g-----------------~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
..+..++++++.++| .+|+.++ . +++|++|+|++|.+.+.+|..|+++++|++|+|++|
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~--L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSN--LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG--CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhcc--CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 357889999999999 4898887 7 999999999999999999999999999999999999
Q ss_pred C-CCC-CCChhhcCCC-------CCCEEECCCCCCCcCCch--hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEe
Q 005177 136 N-FSG-HFPGGIQSLR-------NLLVLDAFSNSFSGSVPA--EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (710)
Q Consensus 136 ~-l~~-~~p~~l~~L~-------~L~~L~L~~N~l~~~~p~--~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 204 (710)
+ ++| .+|..+++++ +|++|+|++|.++ .+|. .++++++|++|+|++|+++ .+| .|+++++|+.|+|
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 8 998 8998887766 9999999999999 8998 9999999999999999999 888 8999999999999
Q ss_pred cCCcCCCCCccccccccc-ccccccccccccccCCccccCCCc--cchhccccccCCccCchh---cc--CCCCCcEEEc
Q 005177 205 AGNLLNDQIPAELGMLKT-VTHMEIGYNFYQGNIPWQLGNMSE--VQYLDIAGANLSGSIPKE---LS--NLTKLESLFL 276 (710)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~-L~~L~l~~n~~~g~~p~~l~~l~~--L~~L~ls~n~l~g~~p~~---l~--~l~~L~~L~L 276 (710)
++|.++ .+|..+..+++ |+.|++++|.++ .+|..+..++. |+.|++++|++++.+|.. +. .+++|+.|+|
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred cCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 999998 89999999999 999999999998 78888877654 999999999998876642 22 3458889999
Q ss_pred cccccCCCCCccc-cCCCCCCEEEccCCCCCCCCCccccCC--------CCCCEEEcccccCcccCCcccC--CCCCCcE
Q 005177 277 FRNQLAGQVPWEF-SRVTTLKSLDLSDNRLSGPIPESFADL--------KNLRLLSLMYNEMSGTVPESLV--QLPSLEI 345 (710)
Q Consensus 277 ~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~ 345 (710)
++|.++ .+|..+ ..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.
T Consensus 681 s~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~ 757 (876)
T 4ecn_A 681 SYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSN 757 (876)
T ss_dssp CSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCE
T ss_pred cCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCE
Confidence 999988 455544 47888999999999888 566544332 38889999999888 6788876 8889999
Q ss_pred EeccCCCCCCCCCcccCCCCCCcEEECCC------CcCCccCcccccCCCceeeEecccCCcccchhH
Q 005177 346 LFIWNNYFSGSLPENLGRNSKLRWVDVST------NNFNGSIPPDICSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 346 L~L~~N~l~g~~p~~l~~~~~L~~L~ls~------N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
|+|++|.+++ +|..+..+++|+.|++++ |++.+.+|..+..+++|+.|++++|++ +.+|.
T Consensus 758 L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~ 823 (876)
T 4ecn_A 758 MDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDE 823 (876)
T ss_dssp EECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred EEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCH
Confidence 9999998887 788888888899998866 778888888888888899999998888 66663
No 62
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.2e-39 Score=342.91 Aligned_cols=250 Identities=20% Similarity=0.218 Sum_probs=195.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEE------cCCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~------~~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 514 (710)
+.|. ..+.||+|+||.||+|. ..+|+.||||+++... ...+.+.+|++++.++ +|||||+++++|.+.+
T Consensus 22 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 22 DRLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccee--eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3455 77899999999999996 3567899999998643 2356789999999999 7899999999998865
Q ss_pred -ceeEEEeecCCCChhhhhhcC----------------------------------------------------------
Q 005177 515 -QAYLLYDYLPNGNLSEKIRTK---------------------------------------------------------- 535 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~~---------------------------------------------------------- 535 (710)
..++||||+++|+|.++++..
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 489999999999999999652
Q ss_pred ----------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----Ccc
Q 005177 536 ----------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPA 601 (710)
Q Consensus 536 ----------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~ 601 (710)
+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 67888899999999999999999 9999999999999999999999999999865322111 112
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+...|.+||......++.++|||||||++|||+| |+.|+.+...... .. ..+........+. .....+.++
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~----~~~~~~~~~~~~~---~~~~~l~~l 328 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC----RRLKEGTRMRAPD---YTTPEMYQT 328 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HH----HHHHHTCCCCCCT---TCCHHHHHH
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HH----HHHHcCCCCCCCC---CCCHHHHHH
Confidence 3345778898888889999999999999999999 8888864332111 00 0000100011111 112457788
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+||+.||++||||.|++++|+.+.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999998763
No 63
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.7e-38 Score=351.42 Aligned_cols=245 Identities=17% Similarity=0.216 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|....+..||||.++......+.+.+|++++++++|||||++++++.+ +..++|||||++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 667899999999999998888899999998765566789999999999999999999999876 6789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---ccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~~ 602 (710)
++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ...
T Consensus 267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 343 (452)
T 1fmk_A 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343 (452)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcc
Confidence 99974 478999999999999999999998 99999999999999999999999999998654221111 112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 414 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP---ECPESLHDLM 414 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TSCHHHHHHH
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 233677888888889999999999999999999 888876432111 111111111011111 1234567889
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+||+.||++|||++++++.|+.+..
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHccCChhhCcCHHHHHHHHHHHhc
Confidence 99999999999999999999998753
No 64
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=334.65 Aligned_cols=262 Identities=19% Similarity=0.229 Sum_probs=190.5
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC----Cce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----HQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|... |+.||||++............|+.....++||||+++++++... +..
T Consensus 34 ~~~~~y~--~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 34 TIAKQIQ--MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp THHHHCE--EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred ccccceE--EEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3445677 8899999999999999874 89999999975443332233333333445899999999999887 678
Q ss_pred eEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 517 YLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
++||||+++|+|.++++. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999999975 5789999999999999999999863 4589999999999999999999999999987
Q ss_pred cccccCCC------CcccccccCchhhhhccCCccc------cceeeHHHHHHHHHhCCCC----------CCCCCCCCc
Q 005177 591 LTQLADGS------FPAKIAWTESGEFYNAMKEEMY------MDVYGFGEIILEILTNGRL----------TNAGSSLQN 648 (710)
Q Consensus 591 ~~~~~~~~------~~~~~~~~~~~e~~~~~~~~~~------~DVySfGvvl~Elltg~~p----------~~~~~~~~~ 648 (710)
........ ...++..|.+||.......+.+ +|||||||++|||+||+.| +........
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 270 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence 54322111 1124455778888766555444 8999999999999999544 332111000
Q ss_pred cccccccccccccccc--CCCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 649 KPIDGLLGEMYNENEV--GSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 649 ~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
... ........... ..+. ...+....+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 271 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 271 -SYE-DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp -CHH-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -chh-hhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 000 00000000000 0011 112456678899999999999999999999999998754
No 65
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-38 Score=326.27 Aligned_cols=247 Identities=20% Similarity=0.263 Sum_probs=199.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||.+.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 66889999999999999888999999999876656678999999999999999999999999999999999999999999
Q ss_pred hhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCcccc
Q 005177 530 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 603 (710)
Q Consensus 530 ~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 603 (710)
+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3t9t_A 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168 (267)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccccccc
Confidence 99975 368999999999999999999998 99999999999999999999999999987653211 1111122
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
..+.+||......++.++||||||+++|||+| |+.|+....... ....+........+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~~---~~~~l~~li~ 239 (267)
T 3t9t_A 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPRL---ASTHVYQIMN 239 (267)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhcCCcCCCCcc---CcHHHHHHHH
Confidence 34678888888888999999999999999999 787776432110 0111111100110111 1245678899
Q ss_pred hcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 683 LCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
+|++.||++|||+.|++++|+++.+.
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999988654
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=329.84 Aligned_cols=254 Identities=13% Similarity=0.106 Sum_probs=195.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++...+ ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 678899999999999986 569999999998643 23567789999999999999999999998765 7799999999
Q ss_pred CCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCcccccccc
Q 005177 525 NGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 525 ~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~~~~~~ 595 (710)
+|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 9999999975 278999999999999999999999 99999999999999 78888999999999875432
Q ss_pred CCC-CcccccccCchhhhh--------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc--cccccc--------c
Q 005177 596 DGS-FPAKIAWTESGEFYN--------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLL--------G 656 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~--------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~--~~~~~~--------~ 656 (710)
... ...+...|.+||... ...++.++|||||||++|||+||+.||......... ...... .
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 221 112344577788765 467888999999999999999999998632211100 000000 0
Q ss_pred -------ccc--cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 657 -------EMY--NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 657 -------~~~--~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+ .+...............+.+++.+|++.||++|||++|+++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 000 00000011122445566788999999999999999999999886543
No 67
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.1e-38 Score=340.26 Aligned_cols=249 Identities=17% Similarity=0.179 Sum_probs=196.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+.+.|. ..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++|||||++++++.+++..|
T Consensus 27 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344566 778999999999999985 679999999998642 23567889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~ 592 (710)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999998865 468899999999999999999999 99999999999999865 45999999999765
Q ss_pred cccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
..... ....++.+|.+||+.....++.++|||||||++|||+||+.||.+..... ....+.........+.+.
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 255 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKAGAYDYPSPEWD 255 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTGGG
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCccccc
Confidence 43221 11224556788898888889999999999999999999999986433111 011111111011111222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 256 TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 234567789999999999999999998764
No 68
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.6e-38 Score=335.17 Aligned_cols=243 Identities=16% Similarity=0.210 Sum_probs=190.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
.+.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFE--PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEE--EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCc--eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 34455 778999999999999996 489999999998533 34677899999999999999999999986643
Q ss_pred ----------------------------------------------------ceeEEEeecCCCChhhhhhc-----CCC
Q 005177 515 ----------------------------------------------------QAYLLYDYLPNGNLSEKIRT-----KRD 537 (710)
Q Consensus 515 ----------------------------------------------------~~~lv~Ey~~~gsL~~~l~~-----~~~ 537 (710)
..++||||+++|+|.+++.. ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 27999999999999999976 345
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--------------CCcccc
Q 005177 538 WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------------SFPAKI 603 (710)
Q Consensus 538 ~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--------------~~~~~~ 603 (710)
+..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 677899999999999999998 999999999999999999999999999886543211 111244
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..|.+||......++.++|||||||++|||++|..|+..... ........ ..+.........+.+++.+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--------IITDVRNL---KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH--------HHHHHHTT---CCCHHHHHHCHHHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH--------HHHHhhcc---CCCcccccCChhHHHHHHH
Confidence 557888988888899999999999999999998665421110 00111111 1122233445667889999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
|++.||++|||+.|++++
T Consensus 309 ~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHCSSGGGSCCHHHHHHS
T ss_pred HccCCCCcCCCHHHHhhc
Confidence 999999999999999874
No 69
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-38 Score=336.09 Aligned_cols=244 Identities=16% Similarity=0.233 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCc----EEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGI----TVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+ .||+|.+.... ...+.+.+|++++++++|||||+++++|.+++ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 778999999999999984 4554 46888886432 33577899999999999999999999998754 7899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 174 (327)
T 3poz_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence 999999999965 468999999999999999999998 99999999999999999999999999998654322111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccc-ccCCCcchHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSSSSLQDE 673 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 673 (710)
..+...|.+||......++.++|||||||++|||+| |+.|+....... ..+..... ....+. ..
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~---~~ 244 (327)
T 3poz_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQPP---IC 244 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTCCCCCCT---TB
T ss_pred cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-------HHHHHHcCCCCCCCc---cC
Confidence 112334778898888889999999999999999999 888886432111 01111110 011111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...+.+++.+||+.||++||+|.|++++|+.+.+
T Consensus 245 ~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 3457789999999999999999999999987643
No 70
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-38 Score=331.14 Aligned_cols=251 Identities=16% Similarity=0.224 Sum_probs=190.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. ..+.||+|+||.||+|.... .+|||.++.. ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 37 ~~~--~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 37 EVM--LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp SCC--EEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ceE--EEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 355 77889999999999998643 5899988753 234577899999999999999999999875 456899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|+++|+|.+++.. ..++.++..|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999963 568999999999999999999998 999999999999999999999999999875432111
Q ss_pred ---CCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 598 ---SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
....++..|.+||... ...++.++|||||||++|||+||+.||......... ..........+. . .....
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~~~~~~~~~~~-~--~~~~~ 264 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGRGYASPD-L--SKLYK 264 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHHTCCCCC-S--TTSCS
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH-HHHHhcCCCCcc-h--hhhhc
Confidence 1122445577888775 556788999999999999999999998743321110 000000111111 0 00011
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.....+.+++.+||+.+|++||++.|+++.|+.++.
T Consensus 265 ~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 122457788999999999999999999999987753
No 71
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=339.90 Aligned_cols=248 Identities=17% Similarity=0.129 Sum_probs=183.3
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.+.|. ..+.||+|+||.||+|.. .+++.||||+++... ..+.+.+|++++++++|||||+++++|.+++..++|||
T Consensus 52 ~~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFE--VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEE--EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 34455 678999999999999986 468899999998543 45668889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~ 596 (710)
|+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999999975 468899999999999999999998 9999999999999975 8899999999998654321
Q ss_pred C-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHH
Q 005177 597 G-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 675 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (710)
. ....++..|.+||+.....++.++|||||||++|||+||+.|+.+...... . ...+.........+...+...
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~----~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-M----FRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-H----HHHHHTTCCCCCTTTTTTSCH
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-H----HHHHHhCCCccCCchhhhCCH
Confidence 1 112244557888988888899999999999999999999999875432110 0 111111110000111122334
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 676 LVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 676 ~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.+++.+|++.||++|||+.|+++.
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 67789999999999999999999874
No 72
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2e-38 Score=339.20 Aligned_cols=244 Identities=15% Similarity=0.168 Sum_probs=193.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+++..|
T Consensus 25 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 25 VYE--LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ceE--EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 455 778999999999999985 6799999999975321 3567899999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCc
Q 005177 518 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGF 588 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGl 588 (710)
+|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988754 368889999999999999999998 9999999999999987654 99999999
Q ss_pred cccccccCC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 589 KYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 589 a~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
++....... ....++.+|.+||......++.++||||+||++|||+||+.|+.+... .....+........
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~~~~~ 252 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGKYKMN 252 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTCCCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCCCCCC
Confidence 976543221 112245567888998888889999999999999999999999874321 01111111110000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+..+......+.+++.+|++.||++|||+.|+++
T Consensus 253 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111122356778999999999999999999986
No 73
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-38 Score=336.22 Aligned_cols=250 Identities=21% Similarity=0.249 Sum_probs=198.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++||||++++++|.+++.
T Consensus 47 ~~~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 47 NNIE--YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp GGCE--EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHCe--eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3455 6788999999999999863 45899999998643 235678999999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCC
Q 005177 516 AYLLYDYLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLK 569 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk 569 (710)
.++||||+++|+|.+++.. .+++.++..++.|+++||+|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 9999999999999999864 367888999999999999999998 99999999
Q ss_pred CCCeEecCCCceEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCC
Q 005177 570 ASNIVFDENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGS 644 (710)
Q Consensus 570 ~~NiLl~~~~~~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~ 644 (710)
|+||+++.++.+||+|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.|+.+..
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999876432211 11113344778888888889999999999999999999 888886432
Q ss_pred CCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 645 SLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
... ....+.+......+. .....+.+++.+||+.||++||++.|+++.|+++.+
T Consensus 282 ~~~------~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 HEE------VIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HHH------HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hHH------HHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 110 111111111011111 122457789999999999999999999999998865
No 74
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=342.89 Aligned_cols=307 Identities=20% Similarity=0.137 Sum_probs=286.1
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
.+.++.|||++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35799999999999988889999999999999999999999999999999999999999999976667789999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++..|..|.++++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+.++++|+.|++++|++++
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999999999999999999999999999999889999999999999999999998777779999999999999999999
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+..+..+++|+.|++++|.+.+.+|..+....+|+.|++++|++++..+..+..+++|+.|+|++|.+++..+..+..
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 88888999999999999999988888877777779999999999999765578999999999999999999888888999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++|+.|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++...
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 9999999999999999999999999999999999999998666677888999999999999987654
No 75
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-38 Score=334.80 Aligned_cols=238 Identities=16% Similarity=0.124 Sum_probs=190.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 678899999999999985 7899999999975422 2457889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....... ....
T Consensus 92 ~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 6899998854 678999999999999999999998 999999999999999999999999999986543221 1222
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
++..|.+||...+..+ +.++||||+||++|||+||+.||.+...... ...+.... ...+.. ....+.++
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------~~~i~~~~-~~~p~~---~s~~~~~l 238 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------FKKVNSCV-YVMPDF---LSPGAQSL 238 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------BCCCCSSC-CCCCTT---SCHHHHHH
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------HHHHHcCC-CCCccc---CCHHHHHH
Confidence 4556778888776554 6889999999999999999999975432111 11111111 111111 12456789
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||++|+++.
T Consensus 239 i~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhHCcCHHHHHhC
Confidence 999999999999999999763
No 76
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=341.07 Aligned_cols=245 Identities=21% Similarity=0.242 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|.. ..+..||||+++... ...+.+.+|+++++++ +|||||+++++|.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 668899999999999984 234689999998643 2356788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .+++.++.+|+.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 229 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNV 229 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCCCc
Confidence 9999999999999964 268999999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++....... ........+.+||......++.++|||||||++|||+| |+.|+...... . ..
T Consensus 230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-~-----~~ 303 (382)
T 3tt0_A 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-E-----LF 303 (382)
T ss_dssp EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-H-----HH
T ss_pred EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-H-----HH
Confidence 99999999986543211 11112344778898888889999999999999999999 88887643211 0 01
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+........+. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 304 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 304 KLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111110011111 12245778899999999999999999999998763
No 77
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.1e-38 Score=338.93 Aligned_cols=245 Identities=16% Similarity=0.132 Sum_probs=186.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||++.. .+|+.||||++.......+.+.+|+..+++++|||||++++++.+++..++||||+++|+|
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 778999999999999986 5899999999987665567788999999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--eEEcccCccccccccCC-CCcccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLADG-SFPAKI 603 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~~~~~~~-~~~~~~ 603 (710)
.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....... ....++
T Consensus 104 ~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt 180 (361)
T 3uc3_A 104 YERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 180 (361)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCC
Confidence 999864 578999999999999999999998 9999999999999997765 99999999874322111 122245
Q ss_pred cccCchhhhhccCCccc-cceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 604 AWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~-~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
.+|.+||......+..+ +||||+||++|||+||+.||.+....... ......+.... .. .+........+.+++.
T Consensus 181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~-~~-~~~~~~~s~~~~~li~ 256 (361)
T 3uc3_A 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVK-YS-IPDDIRISPECCHLIS 256 (361)
T ss_dssp CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTC-CC-CCTTSCCCHHHHHHHH
T ss_pred CCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCC-CC-CCCcCCCCHHHHHHHH
Confidence 56788898877666555 89999999999999999998754322111 11111111111 00 0000011245678999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 005177 683 LCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RPs~~evl~~ 701 (710)
+||+.||++|||+.|++++
T Consensus 257 ~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 257 RIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHSCSCTTTSCCHHHHHTS
T ss_pred HHccCChhHCcCHHHHHhC
Confidence 9999999999999999874
No 78
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-39 Score=339.38 Aligned_cols=255 Identities=18% Similarity=0.198 Sum_probs=178.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhc--cCCCCceeEEEEEEcCC----ceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH----QAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~l 518 (710)
.|. ..+.||+|+||.||+|.. +|+.||||.+... ....+.+|.+++.. ++||||+++++++...+ ..++
T Consensus 4 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 4 TIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GCC--CCEEEEECSSSEEEEC-C-TTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred eee--ehhhccCCCCeEEEEEEE-cCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 455 678999999999999987 5899999999754 33456667777776 79999999999998876 7899
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
||||+++|+|.+++.. ..++..+.+++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999999975 5678889999999999999999 65 9999999999999999999999999999
Q ss_pred ccccccCCC------CcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhC----------CCCCCCCCCCC
Q 005177 590 YLTQLADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSLQ 647 (710)
Q Consensus 590 ~~~~~~~~~------~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg----------~~p~~~~~~~~ 647 (710)
+........ ...++..|.+||..... .++.++|||||||++|||+|| +.|+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 765432211 11234457788877654 344689999999999999999 44443221110
Q ss_pred cccccccccccccccccC-CCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 648 NKPIDGLLGEMYNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
. ................ .+. ...+....+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 236 P-SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp C-CCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred c-cHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 0 0000111111111000 011 1124456788999999999999999999999999999754
No 79
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.2e-37 Score=345.34 Aligned_cols=320 Identities=20% Similarity=0.205 Sum_probs=282.1
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCC-ChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~~N 159 (710)
+.+..++. .+|. + .++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|
T Consensus 16 ~c~~~~l~-~lp~-l----~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 16 ICINRGLH-QVPE-L----PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp ECCSSCCS-SCCC-C----CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred CcCCCCcc-cCCC-C----CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 44555554 3343 2 368999999999999888999999999999999999998666 567999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcc--cCCCCCCCeEEecCCcCCCCCccc-cccccccccccccccccccc
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIPAE-LGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~l~~n~~~g~ 236 (710)
.+++..|..|+++++|++|+|++|++++.+|.. |.++++|++|++++|.+++..|.. +..+++|++|++++|.+.+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 999989999999999999999999999866555 999999999999999999988877 89999999999999999999
Q ss_pred CCccccCC--CccchhccccccCCccCchh--------ccCCCCCcEEEccccccCCCCCccccC---------------
Q 005177 237 IPWQLGNM--SEVQYLDIAGANLSGSIPKE--------LSNLTKLESLFLFRNQLAGQVPWEFSR--------------- 291 (710)
Q Consensus 237 ~p~~l~~l--~~L~~L~ls~n~l~g~~p~~--------l~~l~~L~~L~L~~n~l~~~~p~~~~~--------------- 291 (710)
.|..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|.+++..|..+..
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred ChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 88888776 78999999999998765543 336689999999999987655443321
Q ss_pred ------------------------CCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEe
Q 005177 292 ------------------------VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347 (710)
Q Consensus 292 ------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 347 (710)
.++|+.|++++|++.+.+|..++.+++|+.|++++|++++..|..+..+++|++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 250 YNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp TTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 25899999999999999999999999999999999999998899999999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 348 L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++|.+++..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++..+
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCH
Confidence 99999998888999999999999999999999889999999999999999999997543
No 80
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.1e-38 Score=332.06 Aligned_cols=245 Identities=20% Similarity=0.237 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|..||||.++... ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 678899999999999974 356899999998643 335678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcC--------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 005177 522 YLPNGNLSEKIRTK--------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575 (710)
Q Consensus 522 y~~~gsL~~~l~~~--------------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl 575 (710)
|+++|+|.+++... .++.++.+++.|+++||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEEE
Confidence 99999999999642 57888999999999999999998 99999999999999
Q ss_pred cCCCceEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccc
Q 005177 576 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 650 (710)
Q Consensus 576 ~~~~~~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 650 (710)
+.++.+||+|||+++....... ........+.+||......++.++|||||||++|||+| |+.|+.+.....
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 9999999999999876532211 11112334678888877788999999999999999999 888886432211
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....+........+. .....+.+++.+||+.||++||++.|+++.|+++.
T Consensus 261 ---~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 261 ---LFNLLKTGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp ---HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHhhcCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001111110011111 12345778999999999999999999999998764
No 81
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=335.42 Aligned_cols=255 Identities=20% Similarity=0.245 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc-----CCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|+. +|+.||||++...........+|+..+..++||||+++++++.. ....++||||++
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~ 95 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence 778999999999999976 78999999998654333333445555667899999999987643 235689999999
Q ss_pred CCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCC------CCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 525 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 525 ~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
+|+|.+++.. ..+|..+.+++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~ 175 (336)
T 3g2f_A 96 NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175 (336)
T ss_dssp TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSC
T ss_pred CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccc
Confidence 9999999975 5589999999999999999999873 34899999999999999999999999999976532110
Q ss_pred ----------CCcccccccCchhhhhc-------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccc-------
Q 005177 598 ----------SFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG------- 653 (710)
Q Consensus 598 ----------~~~~~~~~~~~~e~~~~-------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~------- 653 (710)
....++..|.+||...+ ..++.++|||||||++|||+||+.|+..+..........
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3g2f_A 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNH 255 (336)
T ss_dssp C---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSS
T ss_pred cCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCC
Confidence 01123445778887765 456678999999999999999988877544322211100
Q ss_pred ----ccc-----ccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 654 ----LLG-----EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 654 ----~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
... ....+...............+.+++.+||+.||++|||+.|+++.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 256 PTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred chHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 000 0000000000111123455788999999999999999999999999876
No 82
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.3e-38 Score=334.69 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=192.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 7 ~~y~--i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 7 EDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TCEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhce--eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3455 778999999999999985 5899999999975432 2456889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999999976 478999999999999999999998 999999999999999999999999999976532111
Q ss_pred ---CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....++..|.+||......+ +.++|||||||++|||+||+.||.......... ....... .. .......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----~~~~~~~-~~-~~~~~~~ 234 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-----SDWKEKK-TY-LNPWKKI 234 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-----HHHHTTC-TT-STTGGGS
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhccc-cc-CCccccC
Confidence 11224455778888776654 778999999999999999999987433221100 0000000 00 1111222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 3456789999999999999999999864
No 83
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=329.32 Aligned_cols=245 Identities=22% Similarity=0.289 Sum_probs=186.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|.. .++.||||++... ...+.+.+|++++++++|||||+++|++. +..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 668899999999999987 4789999999743 34567889999999999999999999886 4589999999999999
Q ss_pred hhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-eEEcccCccccccccCCCCcccc
Q 005177 530 EKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHLAEFGFKYLTQLADGSFPAKI 603 (710)
Q Consensus 530 ~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-~kl~DfGla~~~~~~~~~~~~~~ 603 (710)
+++.. ..++.....++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++......... .+.
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~-~gt 166 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-KGS 166 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------CC
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccC-CCC
Confidence 99975 2478889999999999999999943338999999999999998886 7999999987654322111 234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||......++.++|||||||++|||+||+.|+.......... .......... .........+.+++.+
T Consensus 167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI----MWAVHNGTRP---PLIKNLPKPIESLMTR 239 (307)
T ss_dssp TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH----HHHHHTTCCC---CCBTTCCHHHHHHHHH
T ss_pred CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH----HHHHhcCCCC---CcccccCHHHHHHHHH
Confidence 45778898888889999999999999999999999987432211000 0000000000 0011122456788999
Q ss_pred cCCCCCCCCCCHHHHHHHHhccC
Q 005177 684 CTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
||+.||++|||++|++++|+.+.
T Consensus 240 ~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HhcCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999998764
No 84
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.2e-38 Score=335.19 Aligned_cols=246 Identities=16% Similarity=0.183 Sum_probs=178.8
Q ss_pred hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 451 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
.+.||+|+||.||+|.. .+|+.||||.+... ....+.+|++++.+++ |||||++++++.+++..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 46799999999999986 57999999999753 3456778999999997 99999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ceEEcccCccccccccCCC--Ccc
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
.+++.. .+++.++..|+.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++........ ...
T Consensus 94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999975 468999999999999999999998 999999999999998765 8999999999865432211 122
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-cccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
++..|.+||......++.++||||+||++|||+||+.||......... ........+...........+......+.++
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 345577889888888999999999999999999999998743321110 0111111222221111112223344677899
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||++|++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHCCCChhHCCCHHHHhcC
Confidence 999999999999999998753
No 85
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.7e-36 Score=348.54 Aligned_cols=328 Identities=17% Similarity=0.080 Sum_probs=274.9
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+++..|..+.. +++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~--l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSR--LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTT--CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred cCcEEEccCCccCcCChhHhcc--CccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 5788999999999887778877 89999999999999988899999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccc--ccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT--HMEIGYNFY 233 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~l~~n~~ 233 (710)
|++|.+++..|..++++++|++|+|++|.+++..+..+..+++|++|++++|.+++..|..++.+++|+ .|++++|.+
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999987788899999999999999999974444455599999999999999988888899999998 788999988
Q ss_pred cccCCccccCC---------------------------------------------------CccchhccccccCCccCc
Q 005177 234 QGNIPWQLGNM---------------------------------------------------SEVQYLDIAGANLSGSIP 262 (710)
Q Consensus 234 ~g~~p~~l~~l---------------------------------------------------~~L~~L~ls~n~l~g~~p 262 (710)
.+..|..+... .+|+.|++++|++++..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 87666544321 157777888888887777
Q ss_pred hhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcc-cCCCC
Q 005177 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES-LVQLP 341 (710)
Q Consensus 263 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~ 341 (710)
..+..+++|++|++++|+++ .+|..+..+++|++|++++|++.+..|..+..+++|+.|++++|.+.+.+|.. +..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 77888888888888888887 67777888888888888888888777778888888888888888887766554 77888
Q ss_pred CCcEEeccCCCCCCCC--CcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 342 SLEILFIWNNYFSGSL--PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 342 ~L~~L~L~~N~l~g~~--p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+|++|++++|.+++.. |..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 417 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTT
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCccc
Confidence 8888888888887655 6677888888888888888887777788888888888888888876543
No 86
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.2e-37 Score=325.14 Aligned_cols=251 Identities=18% Similarity=0.254 Sum_probs=180.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 6 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 6 QFK--QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cee--EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 355 778999999999999986 5799999999976432 34678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 522 YLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 522 y~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
|++ |+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 699998854 367888999999999999999998 99999999999999999999999999998654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccc
Q 005177 594 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 655 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 655 (710)
..... ...++..|.+||.... ..++.++|||||||++|||+||+.||.+..... .|......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 22111 1223455778887765 467899999999999999999999987432110 00000000
Q ss_pred cccccccccCCCcchH---------HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENEVGSSSSLQ---------DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
................ .....+.+++.+|++.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000000000011 112467899999999999999999999864
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=340.95 Aligned_cols=250 Identities=18% Similarity=0.192 Sum_probs=197.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|++++++++|||||++++++.+++..++
T Consensus 48 ~~~~~y~--i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 48 SVYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccccceE--EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 3445566 778999999999999985 578999999998643 345678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCceEEcccCcccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~ 593 (710)
||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999999965 468999999999999999999998 9999999999999984 4789999999998654
Q ss_pred ccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 594 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 594 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
..... ...++..|.+||+.....++.++|||||||++|||+||+.|+.+...... ...+...........+..
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~~~ 276 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET------LQNVKRCDWEFDEDAFSS 276 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHHCCCCCCSSTTTT
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCCCCcccccc
Confidence 32111 11245557888988888899999999999999999999999875332110 011110000000111112
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+.+++.+|++.||++|||+.|+++.
T Consensus 277 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 23467789999999999999999999874
No 88
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.8e-38 Score=340.03 Aligned_cols=248 Identities=15% Similarity=0.140 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|..++.++ +|||||++++++.+++..+
T Consensus 52 ~~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 52 QDFD--LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hHcE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3455 778999999999999985 5788999999986422 245577888888876 8999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999875 578999999999999999999999 9999999999999999999999999999853221
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc--cc-ccccccccccccccCCCcch
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--KP-IDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 670 (710)
. .....++..|.+||+.....++.++||||+||++|||++|+.||........ .. .......+.... ...+..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~- 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPRS- 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCTT-
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCCc-
Confidence 1 1122355668889998888899999999999999999999999963321110 00 000111111111 111111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCH------HHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSM------EEALK 700 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~------~evl~ 700 (710)
....+.+++.+|++.||++||++ .|+++
T Consensus 285 --~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 285 --LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp --SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred --CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 23456789999999999999985 56654
No 89
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.3e-37 Score=323.15 Aligned_cols=244 Identities=21% Similarity=0.294 Sum_probs=188.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh--------HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~--------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++++++||||+++++++.+.. ++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEE
Confidence 678899999999999986 68999999999753221 267889999999999999999999986554 7999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCc-----eEEcccCccc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENME-----PHLAEFGFKY 590 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~-----~kl~DfGla~ 590 (710)
||+++|+|.+.+.. ..++..+..++.|+++||+|||+. + |+||||||+||+++.++. +||+|||+++
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp ECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred EecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999998854 568999999999999999999998 6 999999999999988776 9999999987
Q ss_pred cccccCCCCcccccccCchhhh--hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 591 LTQLADGSFPAKIAWTESGEFY--NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~e~~--~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
......... .+...|.+||.. ....++.++||||+||++|||+||+.|+....................+. . +
T Consensus 178 ~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~--~- 252 (287)
T 4f0f_A 178 QSVHSVSGL-LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-I--P- 252 (287)
T ss_dssp CCSSCEECC-CCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC-C--C-
T ss_pred ccccccccc-CCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC-C--C-
Confidence 543221111 234457788876 34456889999999999999999999987433211000000000000000 0 1
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 253 --~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 253 --EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11234577899999999999999999999999875
No 90
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.5e-38 Score=332.92 Aligned_cols=245 Identities=20% Similarity=0.266 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcE----EEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~----vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|.. ||+|.+.... ...+.+.+|+.++++++|||||+++++|. ++..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 778999999999999985 45554 7888876432 22456778999999999999999999986 5678999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 172 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence 999999999965 568889999999999999999999 99999999999999999999999999998764322211
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+...|.+||......++.++|||||||++|||+| |+.|+.+...... . ..+........+.. ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~----~~~~~~~~~~~~~~---~~ 243 (325)
T 3kex_A 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--P----DLLEKGERLAQPQI---CT 243 (325)
T ss_dssp C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--H----HHHHTTCBCCCCTT---BC
T ss_pred cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--H----HHHHcCCCCCCCCc---Cc
Confidence 113334778898888889999999999999999999 9988864322110 0 00000000110111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 245678889999999999999999999988754
No 91
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.2e-38 Score=334.76 Aligned_cols=248 Identities=10% Similarity=0.016 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+++++++ +||||+++++++..++..++||||+ +|+
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 778999999999999984 789999999987543 234578899999999 9999999999999999999999999 899
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-----eEEcccCccccccccCC--
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-----~kl~DfGla~~~~~~~~-- 597 (710)
|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.......
T Consensus 91 L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~ 167 (330)
T 2izr_A 91 LEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK 167 (330)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCc
Confidence 9999873 578999999999999999999998 9999999999999998887 99999999986533221
Q ss_pred -------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 598 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 598 -------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
....++..|.+||......++.++|||||||++|||+||+.||.+...... ......+............
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~~~~~~ 244 (330)
T 2izr_A 168 HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRATPIEVL 244 (330)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHSCHHHH
T ss_pred cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccCCHHHH
Confidence 112244557788988888899999999999999999999999875322110 0011111111100000000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+..+.+.+++..|++.||.+||++.++.+.|+++
T Consensus 245 ~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 245 CENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp TTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 01122678899999999999999999999998765
No 92
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=328.28 Aligned_cols=240 Identities=15% Similarity=0.151 Sum_probs=183.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------------------------hHHHHHHHHHHHhccCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIGTVRHK 501 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------------------------~~~~~~~e~~~l~~l~H~ 501 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 778999999999999985 6789999999975421 135688999999999999
Q ss_pred CceeEEEEEEc--CCceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC
Q 005177 502 NLIRLLGFCYN--RHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN 578 (710)
Q Consensus 502 niv~l~g~~~~--~~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~ 578 (710)
|||++++++.+ ++..++||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 173 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGED 173 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCC
Confidence 99999999987 5678999999999999988754 578999999999999999999999 99999999999999999
Q ss_pred CceEEcccCccccccccCC--CCcccccccCchhhhhccC---CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccc
Q 005177 579 MEPHLAEFGFKYLTQLADG--SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 653 (710)
Q Consensus 579 ~~~kl~DfGla~~~~~~~~--~~~~~~~~~~~~e~~~~~~---~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~ 653 (710)
+.+||+|||+++....... ....++..|.+||...... .+.++|||||||++|||++|+.|+.+.....
T Consensus 174 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------ 247 (298)
T 2zv2_A 174 GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC------ 247 (298)
T ss_dssp SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------
T ss_pred CCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH------
Confidence 9999999999976543221 1122344577788776543 3678999999999999999999986432110
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 654 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+.... .. .+........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~-~~-~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQA-LE-FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCC-CC-CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhccc-CC-CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 000110000 00 0000111245678899999999999999999875
No 93
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-38 Score=329.41 Aligned_cols=238 Identities=17% Similarity=0.165 Sum_probs=193.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++.. .+|+.||||.++... ...+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 678999999999999986 579999999998642 235667889999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAK 602 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 602 (710)
+|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ..+
T Consensus 90 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~-~~g 165 (318)
T 1fot_A 90 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT-LCG 165 (318)
T ss_dssp SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC-CCS
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCcccc-ccC
Confidence 9999999975 568888999999999999999998 9999999999999999999999999999875433222 224
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHh
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 682 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 682 (710)
+..|.+||......++.++||||+||++|||++|+.||.+..... ....+.... ...+.. ....+.+++.
T Consensus 166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~~~li~ 235 (318)
T 1fot_A 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK------TYEKILNAE-LRFPPF---FNEDVKDLLS 235 (318)
T ss_dssp CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHHHHH
T ss_pred CccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCCC---CCHHHHHHHH
Confidence 455778898888889999999999999999999999987433211 111111111 111111 1245678889
Q ss_pred hcCCCCCCCCC-----CHHHHHHH
Q 005177 683 LCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 683 ~Cl~~~p~~RP-----s~~evl~~ 701 (710)
+|++.||++|| +++|++++
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 88888753
No 94
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.3e-38 Score=324.69 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=197.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||+|.. .++..||||.+.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 678899999999999986 4588999999987766778899999999999999999999999999999999999999999
Q ss_pred hhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC---cc
Q 005177 529 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PA 601 (710)
Q Consensus 529 ~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---~~ 601 (710)
.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 173 (288)
T 3kfa_A 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173 (288)
T ss_dssp HHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEE
T ss_pred HHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCc
Confidence 999964 368899999999999999999998 99999999999999999999999999998654322111 11
Q ss_pred cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
....+.+||......++.++||||+||++|||++ |+.|+....... .. ........ ...+. .....+.++
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~-~~~~~~~~---~~~~~---~~~~~l~~l 244 (288)
T 3kfa_A 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VY-ELLEKDYR---MERPE---GCPEKVYEL 244 (288)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH-HHHHTTCC---CCCCT---TCCHHHHHH
T ss_pred cccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH-HHHhccCC---CCCCC---CCCHHHHHH
Confidence 2334778898888889999999999999999999 777776432111 00 00001000 11111 122457788
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 681 ALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+.+|++.||++|||+.|+++.|+.+
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999998765
No 95
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=344.74 Aligned_cols=320 Identities=23% Similarity=0.239 Sum_probs=211.4
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..++.++++++.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILS--LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTT--CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEE
T ss_pred ccccEEECCCCcccccChhhccc--cccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEE
Confidence 35778888888888766666666 888888888888888877888888888888888888888 46655 78888888
Q ss_pred ECCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC--CeEEecCCcC--CCCCcccccccc--------
Q 005177 155 DAFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL--EFLHLAGNLL--NDQIPAELGMLK-------- 221 (710)
Q Consensus 155 ~L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~-------- 221 (710)
+|++|.+++ .+|..++++++|++|+|++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 888888887 578888888888888888888765 235555555 6666666666 445554444322
Q ss_pred ---------------------------------------------------------------------------ccccc
Q 005177 222 ---------------------------------------------------------------------------TVTHM 226 (710)
Q Consensus 222 ---------------------------------------------------------------------------~L~~L 226 (710)
+|++|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 45555
Q ss_pred ccccccccccCCccc-----------------------------------------------------cCCCccchhccc
Q 005177 227 EIGYNFYQGNIPWQL-----------------------------------------------------GNMSEVQYLDIA 253 (710)
Q Consensus 227 ~l~~n~~~g~~p~~l-----------------------------------------------------~~l~~L~~L~ls 253 (710)
++++|.+.|.+|..+ ..+++|++|+++
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeE
Confidence 555555555555544 344555566666
Q ss_pred cccCCccCchhccCCCCCcEEEccccccCC--CCCccccCCCCCCEEEccCCCCCCCCCcc-ccCCCCCCEEEcccccCc
Q 005177 254 GANLSGSIPKELSNLTKLESLFLFRNQLAG--QVPWEFSRVTTLKSLDLSDNRLSGPIPES-FADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 254 ~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~ 330 (710)
+|++++.+|..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+|.. +..+++|+.|++++|+++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 666665555555666666666666666654 33445555666666666666666544432 555566666666666665
Q ss_pred ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc-ccCCCceeeEecccCCcccchh
Q 005177 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD-ICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 331 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~-~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+.+|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|.. +..+++|+.|++++|.+++..+
T Consensus 413 ~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 413 DTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 55554443 56666666666666 56666666666666666666666 45554 5566666666666666666544
No 96
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=337.85 Aligned_cols=242 Identities=17% Similarity=0.149 Sum_probs=191.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|.+++.++ +|||||++++++.+++..|
T Consensus 23 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 23 DNFE--FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp CCEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hheE--EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3455 778999999999999985 679999999998642 2345677889999887 6999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999999965 678999999999999999999999 9999999999999999999999999999853221
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....++..|.+||+.....++.++||||+||++|||+||+.||.+.... .....+.... ...+.. .
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~~---~ 247 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDE-VVYPTW---L 247 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCTT---S
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCCC---C
Confidence 11 1222455678889888888999999999999999999999998743321 1111221111 111111 2
Q ss_pred HHHHHHHHhhcCCCCCCCCCCH------HHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSM------EEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~------~evl~ 700 (710)
...+.+++.+|++.||++||++ +|+++
T Consensus 248 ~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2456788999999999999998 77764
No 97
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1e-37 Score=323.05 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=183.9
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... .+..||||.++... ...+.+.+|+..+++++||||+++++++. ++..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 6788999999999999863 35679999987532 23567889999999999999999999984 56789999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (281)
T 1mp8_A 98 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174 (281)
T ss_dssp TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------------
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccccccc
Confidence 99999999974 468999999999999999999998 9999999999999999999999999999765432111
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
.......|.+||......++.++|||||||++|||++ |+.|+.+..... ....+........+. .....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~ 245 (281)
T 1mp8_A 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMPP---NCPPT 245 (281)
T ss_dssp ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCCCCT---TCCHH
T ss_pred ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH------HHHHHHcCCCCCCCC---CCCHH
Confidence 1112334778888888889999999999999999997 777876432211 111111111011111 12245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 678899999999999999999999998763
No 98
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.9e-38 Score=323.36 Aligned_cols=243 Identities=19% Similarity=0.270 Sum_probs=194.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|...++..||||.++......+.+.+|++++++++||||+++++++. .+..++||||+++|+|.
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 67889999999999999888889999999876656778999999999999999999999986 45689999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---CCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---SFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~~~~ 602 (710)
+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....... .....
T Consensus 96 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 172 (279)
T 1qpc_A 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172 (279)
T ss_dssp HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCC
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCC
Confidence 99975 578999999999999999999998 999999999999999999999999999876542211 11112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~l~~li 243 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGYRMVRPD---NCPEELYQLM 243 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHHHHHH
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH------HHHHHhcccCCCCcc---cccHHHHHHH
Confidence 234678888887788999999999999999999 787876432111 001111100000011 1124567889
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+|++.||++|||+.++++.|+++
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccChhhCCCHHHHHHHHHHH
Confidence 999999999999999999999876
No 99
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=336.43 Aligned_cols=245 Identities=16% Similarity=0.184 Sum_probs=192.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++++++|||||+++++|.+.+..|+
T Consensus 15 ~~y~--i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 15 DHFE--ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGEE--EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3455 778999999999999985 678999999997542 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999976 568889999999999999999999 99999999999999999999999999998654322
Q ss_pred C-CCcccccccCchhhhhc---cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 597 G-SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~---~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
. ....++..|.+||+... ..++.++|||||||++|||+||+.||........ ......+.... ...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~-~~~p~~--- 242 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTV-VTYPSA--- 242 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCC-CCCCTT---
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhcc-cCCCCc---
Confidence 1 12224555778887753 3578899999999999999999999874332111 00111111111 111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCC-HHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPS-MEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs-~~evl~ 700 (710)
....+.+++.+|++.||++||+ ++++.+
T Consensus 243 ~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2345778999999999999998 677654
No 100
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.7e-37 Score=343.99 Aligned_cols=253 Identities=19% Similarity=0.217 Sum_probs=191.7
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 514 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 61 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 34455 778999999999999984 67999999999863 234567889999999999999999999997653
Q ss_pred --ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 --QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 --~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+|||||++ ++.+.+...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred CCeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 56999999985 68888877889999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-------------c---cc
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------------G---LL 655 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-------------~---~~ 655 (710)
...... ...++.+|.+||+..+..++.++||||+||++|||++|+.||.+......+... . ..
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 432211 122566788999988888999999999999999999999998754321110000 0 00
Q ss_pred cccccccc---------------cCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENE---------------VGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~---------------~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.......+ ... ..........+.+++.+|++.||++|||++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000 00111224678899999999999999999999874
No 101
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-38 Score=334.70 Aligned_cols=247 Identities=18% Similarity=0.199 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .++..||||.+.... ...+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 678999999999999985 356789999997532 2356788999999999 8999999999999999999999
Q ss_pred eecCCCChhhhhhcC-------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 005177 521 DYLPNGNLSEKIRTK-------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 575 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~-------------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl 575 (710)
||+++|+|.+++... +++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence 999999999999652 57888999999999999999998 99999999999999
Q ss_pred cCCCceEEcccCccccccccCCCC----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccc
Q 005177 576 DENMEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 650 (710)
Q Consensus 576 ~~~~~~kl~DfGla~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~ 650 (710)
+.++.+||+|||+++......... ..+...|.+||......++.++|||||||++|||+| |+.|+.+......
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 283 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-- 283 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH--
Confidence 999999999999997654322111 112334778888888889999999999999999998 8888864332110
Q ss_pred ccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 651 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
........... ..+. .....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 284 ~~~~~~~~~~~---~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 284 FYKLIQNGFKM---DQPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHHHHTTCCC---CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCC---CCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 00000010000 0011 112457789999999999999999999999988754
No 102
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.3e-37 Score=329.02 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=184.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCC-C---cEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce-
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPT-G---ITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA- 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~-g---~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~- 516 (710)
.|. ..+.||+|+||.||+|.... + ..||||.++.. ....+.+.+|++++++++|||||++++++...+..
T Consensus 24 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 24 QFT--LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp -CE--EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred HeE--EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 355 77899999999999998643 3 28999999763 23467789999999999999999999999887655
Q ss_pred -----eEEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 517 -----YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 517 -----~lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
++||||+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999854 378899999999999999999999 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++........ .......+.+||......++.++|||||||++|||+| |+.|+.+..... ....+
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHH
Confidence 999999765322111 1112234677888888889999999999999999999 777776433211 11111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........+. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 253 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 253 IGGNRLKQPP---ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCC---ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111011111 12245778999999999999999999999998764
No 103
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.1e-37 Score=321.87 Aligned_cols=247 Identities=19% Similarity=0.251 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh---HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 66889999999999999888999999999754322 46788999999999999999999999999999999999985
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (288)
T 1ob3_A 85 DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (288)
T ss_dssp EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence 99988864 468889999999999999999998 9999999999999999999999999998765422111 112
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccccccccccccC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 665 (710)
++..|.+||.... ..++.++||||+||++|||+||+.||.+..... .|........ .++....
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (288)
T 1ob3_A 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNFTV 240 (288)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT-CCTTCCC
T ss_pred ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc-ccccccc
Confidence 3445778887754 458899999999999999999999987432110 0110000000 0000000
Q ss_pred -CC----cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 -SS----SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 -~~----~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+ .........+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 0001123456789999999999999999999863
No 104
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.1e-38 Score=322.33 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=191.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|++++++++|||||++++++.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 678899999999999997 48899999998642 3356789999999999999999999999887 78899999999
Q ss_pred CCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc
Q 005177 525 NGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600 (710)
Q Consensus 525 ~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 600 (710)
+|+|.+++... .++..+..++.|+++||+|||+. .++|+||||||+||+++.++.++|+|||++...... ..
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~---~~ 168 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---GR 168 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT---TC
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc---Cc
Confidence 99999999762 68999999999999999999997 123999999999999999999999999887543321 11
Q ss_pred ccccccCchhhhhccCC---ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 601 AKIAWTESGEFYNAMKE---EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~~---~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
.++..|.+||....... +.++|||||||++|||+||+.|+.+...... ..........+. . +. .....+
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~-~--~~---~~~~~~ 240 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--GMKVALEGLRPT-I--PP---GISPHV 240 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--HHHHHHSCCCCC-C--CT---TCCHHH
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--HHHHHhcCCCCC-C--CC---CCCHHH
Confidence 23345778887765443 3479999999999999999999864322110 000000100111 0 11 122457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+++.+||+.||++|||++|+++.|+.+++
T Consensus 241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 788899999999999999999999998865
No 105
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=328.90 Aligned_cols=240 Identities=18% Similarity=0.147 Sum_probs=183.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+..|+..+.++ +|||||+++++|.+++..++
T Consensus 57 ~~y~--~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQ--RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4466 778999999999999986 489999999986532 2233344455555544 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+ +|+|.+++.. .++|..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 6799988865 579999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
... ...++..|.+||+..+ .++.++|||||||++|||++|+.|+....... .+.... .. ........
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---------~~~~~~-~~-~~~~~~~~ 278 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ---------QLRQGY-LP-PEFTAGLS 278 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---------HHTTTC-CC-HHHHTTSC
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---------HHhccC-CC-cccccCCC
Confidence 211 1224455778887765 78899999999999999999987765332111 110000 00 00111123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||+.|++++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 567789999999999999999999863
No 106
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.6e-38 Score=335.60 Aligned_cols=241 Identities=18% Similarity=0.177 Sum_probs=191.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+..|.+++.++ +|||||++++++.+++..|
T Consensus 17 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 17 EDFI--LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp TTEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred HHeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3455 778999999999999986 579999999998642 2345677888888876 8999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999975 678999999999999999999999 9999999999999999999999999999754221
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. .....++..|.+||......++.++||||+||++|||+||+.||.+..... ....+.... ...+.. .
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~ 241 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN-PFYPRW---L 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---S
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-CCCCcc---c
Confidence 1 112224556788898888889999999999999999999999986432111 111111111 111111 2
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSME-EAL 699 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~-evl 699 (710)
...+.+++.+|++.||++||++. |+.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 24567889999999999999997 654
No 107
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-37 Score=332.82 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=193.9
Q ss_pred hhhhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc------hhHHHHHHHHHHHhccCCCCceeEEEEEE
Q 005177 439 ANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCY 511 (710)
Q Consensus 439 ~~~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 511 (710)
..++.+.|. ..+.||+|+||.||+|.. .++..||||.+.... ...+.+.+|++++++++|||||++++++.
T Consensus 21 ~~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 21 LLELQKKYH--LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp HHHHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhhee--ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 355666777 788999999999999985 678899999997532 23567899999999999999999999999
Q ss_pred cCCceeEEEeecCCCChhhhhhc------------------------------------------CCCHHHHHHHHHHHH
Q 005177 512 NRHQAYLLYDYLPNGNLSEKIRT------------------------------------------KRDWAAKYKIVLGVA 549 (710)
Q Consensus 512 ~~~~~~lv~Ey~~~gsL~~~l~~------------------------------------------~~~~~~~~~i~~~ia 549 (710)
+++..++||||+++|+|.+++.. ..++.....++.|++
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999852 113455678999999
Q ss_pred HHHHHHhcCCCCCceecCCCCCCeEecCCC--ceEEcccCccccccccCC------CCcccccccCchhhhhc--cCCcc
Q 005177 550 RGLCFLHHDCYPAIPHGDLKASNIVFDENM--EPHLAEFGFKYLTQLADG------SFPAKIAWTESGEFYNA--MKEEM 619 (710)
Q Consensus 550 ~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~--~~kl~DfGla~~~~~~~~------~~~~~~~~~~~~e~~~~--~~~~~ 619 (710)
+||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|.+||.... ..++.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999999 999999999999998766 899999999986532111 11124455778887754 56788
Q ss_pred ccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 005177 620 YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 699 (710)
Q Consensus 620 ~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl 699 (710)
++|||||||++|||+||+.|+.+..... ...++.........+........+.+++.+|++.||++|||+.|++
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDAD------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999999999999986433211 1111111110111111122235677899999999999999999998
Q ss_pred HH
Q 005177 700 KL 701 (710)
Q Consensus 700 ~~ 701 (710)
+.
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 74
No 108
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.6e-37 Score=321.76 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=188.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 678899999999999986 5799999999985432 346788999999999999999999999999999999999985
Q ss_pred CChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Cc
Q 005177 526 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FP 600 (710)
Q Consensus 526 gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~ 600 (710)
++.+.+.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 86 -~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 86 -DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp -EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred -CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 66555532 678999999999999999999999 9999999999999999999999999999865432211 12
Q ss_pred ccccccCchhhhhccC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCc----------------cccccccccccc---
Q 005177 601 AKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN----------------KPIDGLLGEMYN--- 660 (710)
Q Consensus 601 ~~~~~~~~~e~~~~~~-~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~----------------~~~~~~~~~~~~--- 660 (710)
.++.+|.+||...+.. ++.++||||+||++|||+||+.|+..+..... |...........
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccc
Confidence 2345577888876554 79999999999999999999999764432111 000000000000
Q ss_pred -ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 -ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 -~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+...............+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000111223467789999999999999999999864
No 109
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-37 Score=321.92 Aligned_cols=242 Identities=17% Similarity=0.222 Sum_probs=191.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+|. ..+.||+|+||.||+|.. .++..||||.+..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 10 DFE--IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cEE--EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 355 678899999999999985 6688999999975422 256688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999865 578899999999999999999998 999999999999999999999999999865443222
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++||||+|+++|||++|+.|+....... ....+.... ...+.. ....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~ 234 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------TYKRISRVE-FTFPDF---VTEGA 234 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-CCCCTT---SCHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH------HHHHHHhCC-CCCCCc---CCHHH
Confidence 22234455778898888888999999999999999999999986432111 011111111 111111 12356
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+|++.||++|||++|++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 235 RDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHhccChhhCCCHHHHhhC
Confidence 688999999999999999999874
No 110
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.5e-38 Score=329.45 Aligned_cols=246 Identities=18% Similarity=0.215 Sum_probs=195.3
Q ss_pred hhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+++++++ +||||+++++++.+++..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 678899999999999973 467899999998643 2357789999999999 8999999999999999999999
Q ss_pred eecCCCChhhhhhcC--------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 521 DYLPNGNLSEKIRTK--------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~--------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCC
Confidence 999999999999652 68899999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++........ ...+...+.+||......++.++|||||||++|||+| |+.|+........ . ....
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~-~~~~ 261 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F-YKMI 261 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H-HHHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H-HHHh
Confidence 999999998765432211 1112334778888888889999999999999999999 8888764322110 0 0000
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
....... .+. .....+.+++.+|++.||++|||+.|++++|+++-
T Consensus 262 ~~~~~~~---~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 262 KEGFRML---SPE---HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHTCCCC---CCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCCCC---Ccc---cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1110100 011 12245778899999999999999999999998753
No 111
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-37 Score=331.35 Aligned_cols=244 Identities=15% Similarity=0.123 Sum_probs=190.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|.. .+|+.||||.++... ...+.+.+|++++.++ +|||||++++++.+++..|+||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 678999999999999986 578999999998642 2355678899999887 8999999999999999999999999
Q ss_pred CCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--CCC
Q 005177 524 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--GSF 599 (710)
Q Consensus 524 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--~~~ 599 (710)
++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 93 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~ 169 (345)
T 3a8x_A 93 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 169 (345)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCC
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccc
Confidence 99999999965 578899999999999999999998 99999999999999999999999999997532211 112
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc---cccccccccccccccCCCcchHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK---PIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
..++..|.+||......++.++||||+||++|||+||+.||......... ........+.... ...+. .....
T Consensus 170 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~---~~s~~ 245 (345)
T 3a8x_A 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR---SLSVK 245 (345)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred cCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-CCCCC---CCCHH
Confidence 22455678889888888999999999999999999999998642211100 0000111111111 11111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCH------HHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSM------EEALK 700 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~------~evl~ 700 (710)
+.+++.+|++.||++||++ .|+++
T Consensus 246 ~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 246 AASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp HHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred HHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 6788999999999999995 56654
No 112
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=334.96 Aligned_cols=246 Identities=20% Similarity=0.225 Sum_probs=183.1
Q ss_pred hhhhhcCCCCCccEEEEc--CC--CcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL--PT--GITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~--g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+ +..||||.++.. ....+.+.+|++++++++|||||+++++|.+ ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 457899999999999985 23 247899998753 2346778999999999999999999999865 4578999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 173 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 999999999975 467889999999999999999998 9999999999999999999999999999765322110
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.......|.+||......++.++|||||||++|||+||+.|+..+....... ..+........+.. .
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-----~~~~~~~~~~~p~~---~ 321 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPEY---C 321 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-----HHHHTTCCCCCCTT---C
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-----HHHHcCCCCCCCCC---C
Confidence 1112234778888888889999999999999999999655444332221111 01111110111111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 322 ~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 235678899999999999999999999998763
No 113
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.3e-37 Score=328.74 Aligned_cols=249 Identities=18% Similarity=0.178 Sum_probs=196.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+
T Consensus 9 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 9 KVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86 (321)
T ss_dssp CHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhccEE--EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 3445566 778999999999999985 5799999999986422 25678999999999999999999999999
Q ss_pred CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEccc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEF 586 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~Df 586 (710)
++..++||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999999975 457889999999999999999998 999999999999999887 7999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
|+++....... ....+...|.+||......++.++|||||||++|||+||+.|+.+..... ....+.... ..
T Consensus 164 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~-~~ 236 (321)
T 2a2a_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSVS-YD 236 (321)
T ss_dssp TTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTC-CC
T ss_pred ccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcc-cc
Confidence 99976543221 11224455788898888888999999999999999999999986432111 011111111 00
Q ss_pred CCcc-hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSS-LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~-~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+.. .......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0100 11123457789999999999999999999874
No 114
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=341.75 Aligned_cols=309 Identities=23% Similarity=0.255 Sum_probs=242.2
Q ss_pred EEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCC
Q 005177 79 GINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158 (710)
Q Consensus 79 ~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~ 158 (710)
.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++
T Consensus 4 ~l~ls~n~l~-~ip~~~~----~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS----QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp EEECTTSCCS-SCCCSCC----TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred eEecCCCCcc-ccccccc----ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 4788999998 5776653 6899999999999988888999999999999999999999899999999999999999
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccc--cccccccccc--
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY-- 233 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~~-- 233 (710)
|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9999 57776 89999999999999997 588999999999999999999986 456777777 9999999998
Q ss_pred cccCCccccCCC--------------------------------------------------------------------
Q 005177 234 QGNIPWQLGNMS-------------------------------------------------------------------- 245 (710)
Q Consensus 234 ~g~~p~~l~~l~-------------------------------------------------------------------- 245 (710)
.+..|..+..+.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccccc
Confidence 666666655532
Q ss_pred ---------------ccchhccccccCCccCchhc-----cCCCCCcEEEccccccCCCCCc-c----------------
Q 005177 246 ---------------EVQYLDIAGANLSGSIPKEL-----SNLTKLESLFLFRNQLAGQVPW-E---------------- 288 (710)
Q Consensus 246 ---------------~L~~L~ls~n~l~g~~p~~l-----~~l~~L~~L~L~~n~l~~~~p~-~---------------- 288 (710)
+|++|++++|+++|.+|..+ ..+++|+.++++.|.+ .+|. .
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 56666666666777777666 4555444444444444 2220 0
Q ss_pred ---------ccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc--cCCcccCCCCCCcEEeccCCCCCCCC
Q 005177 289 ---------FSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG--TVPESLVQLPSLEILFIWNNYFSGSL 357 (710)
Q Consensus 289 ---------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~ 357 (710)
+..+++|++|++++|++++.+|..++.+++|+.|++++|++++ .+|..+..+++|++|++++|.+++.+
T Consensus 311 ~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 311 GTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp SSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred CCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 1466777888888888877777777788888888888888775 55667777788888888888887756
Q ss_pred Ccc-cCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcc
Q 005177 358 PEN-LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFT 402 (710)
Q Consensus 358 p~~-l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~ 402 (710)
|.. +..+++|+.|++++|.+++.+|..+. +.|+.|++++|+++
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 654 66677777777777777777776553 56777777777777
No 115
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.8e-38 Score=343.71 Aligned_cols=247 Identities=15% Similarity=0.087 Sum_probs=193.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++++.++|||||+++++|.+++..|+
T Consensus 69 ~~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 69 EDYE--VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccE--EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 3455 778999999999999986 5789999999976321 24457889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-
Q 005177 519 LYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~- 596 (710)
|||||++|+|.++++. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 147 V~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp EECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred EEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 9999999999999975 568888999999999999999998 99999999999999999999999999997654321
Q ss_pred --CCCcccccccCchhhhhccC----CccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 597 --GSFPAKIAWTESGEFYNAMK----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 597 --~~~~~~~~~~~~~e~~~~~~----~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.....++..|.+||+..... ++.++|||||||++|||+||+.||.+..... ....+.........+..
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~ 297 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSLTFPDD 297 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCCTT
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh------HHHHHHhccccccCCCc
Confidence 11223455677888876554 7789999999999999999999987443211 11111111000000100
Q ss_pred HHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
......+.+++.+|+..+|++ ||+++||.++
T Consensus 298 ~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 298 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 112345678888999999998 9999999875
No 116
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.6e-37 Score=331.60 Aligned_cols=241 Identities=13% Similarity=0.109 Sum_probs=195.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 42 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 42 QFD--RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HCE--EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 455 778999999999999986 579999999997642 2356788899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999975 578899999999999999999998 999999999999999999999999999986643322
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
. ..++..|.+||......++.++|||||||++|||++|+.||....... ....+.... ...+.. ....+
T Consensus 197 ~-~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~~~~~ 265 (350)
T 1rdq_E 197 T-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSGK-VRFPSH---FSSDL 265 (350)
T ss_dssp C-CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---CCHHH
T ss_pred c-ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH------HHHHHHcCC-CCCCCC---CCHHH
Confidence 2 234555788898888889999999999999999999999987432111 111111111 111111 22456
Q ss_pred HHHHhhcCCCCCCCCCC-----HHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPS-----MEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs-----~~evl~~ 701 (710)
.+++.+|++.||++||+ ++|+.++
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 78899999999999998 8888753
No 117
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=351.98 Aligned_cols=245 Identities=17% Similarity=0.214 Sum_probs=196.5
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 529 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~ 529 (710)
..+.||+|+||.||+|....+..||||+++......+.|.+|++++++++|||||++++++.+ +..++|||||++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 667899999999999998888899999998766566789999999999999999999999876 6789999999999999
Q ss_pred hhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---CCCccc
Q 005177 530 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 602 (710)
Q Consensus 530 ~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~---~~~~~~ 602 (710)
++++. .+++.++..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 350 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 426 (535)
T 2h8h_A 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426 (535)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTS
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcC
Confidence 99974 478999999999999999999998 99999999999999999999999999998653211 111112
Q ss_pred ccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHH
Q 005177 603 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 681 (710)
Q Consensus 603 ~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 681 (710)
...+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.+++
T Consensus 427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l~~li 497 (535)
T 2h8h_A 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP---ECPESLHDLM 497 (535)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHHHHHH
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHHHHHH
Confidence 233667888888889999999999999999999 788876432111 111111111011111 1224567889
Q ss_pred hhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 682 LLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 682 ~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+||+.||++|||++++++.|+.+-.
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999998753
No 118
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.5e-36 Score=347.22 Aligned_cols=325 Identities=17% Similarity=0.108 Sum_probs=258.1
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..+..++++++.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..++++++|++|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~--l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 133 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHG--LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKL 133 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTT--CTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEE
T ss_pred ccCcEEeCCCCcccccCHHHhhc--hhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEE
Confidence 35778888888888777777777 8889999999999988888888899999999999999888777888889999999
Q ss_pred ECCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCC--------------------------------------
Q 005177 155 DAFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS-------------------------------------- 195 (710)
Q Consensus 155 ~L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~-------------------------------------- 195 (710)
++++|.+++ .+|..++++++|++|+|++|++++..|..|+.
T Consensus 134 ~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~ 213 (606)
T 3vq2_A 134 NVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRG 213 (606)
T ss_dssp ECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEES
T ss_pred eCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccC
Confidence 999998876 67888888888988888888877655543322
Q ss_pred --------------------------------------------------------------------------------
Q 005177 196 -------------------------------------------------------------------------------- 195 (710)
Q Consensus 196 -------------------------------------------------------------------------------- 195 (710)
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~ 293 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLA 293 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEec
Confidence
Q ss_pred ------------CCCCCeEEecCCcCCCCCcc--------------------ccccccccccccccccccccc--CCccc
Q 005177 196 ------------FKSLEFLHLAGNLLNDQIPA--------------------ELGMLKTVTHMEIGYNFYQGN--IPWQL 241 (710)
Q Consensus 196 ------------l~~L~~L~L~~N~l~~~~p~--------------------~l~~l~~L~~L~l~~n~~~g~--~p~~l 241 (710)
+++|+.|++++|.+ +.+|. .++.+++|++|++++|.+++. +|..+
T Consensus 294 ~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 372 (606)
T 3vq2_A 294 GVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSD 372 (606)
T ss_dssp SCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHH
T ss_pred CccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhh
Confidence 12333333333333 22331 233566778888888888765 47788
Q ss_pred cCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCC-ccccCCCCCCEEEccCCCCCCCCCccccCCCCCC
Q 005177 242 GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320 (710)
Q Consensus 242 ~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 320 (710)
..+++|++|++++|.+++ +|..+..+++|+.|++++|.+.+..| ..+..+++|+.|++++|++.+..|..+..+++|+
T Consensus 373 ~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN 451 (606)
T ss_dssp HCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred ccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC
Confidence 888889999998888875 55778888888888888888888777 5778888888888888888888888888888888
Q ss_pred EEEcccccCcc-cCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccC
Q 005177 321 LLSLMYNEMSG-TVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSN 399 (710)
Q Consensus 321 ~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N 399 (710)
.|++++|++++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 88888888887 46788888888888888888888888888888888888888888888888888888888888888888
Q ss_pred Cccc
Q 005177 400 NFTG 403 (710)
Q Consensus 400 ~l~g 403 (710)
+++.
T Consensus 532 ~l~~ 535 (606)
T 3vq2_A 532 RIET 535 (606)
T ss_dssp CCCC
T ss_pred cCcc
Confidence 8874
No 119
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2e-37 Score=325.60 Aligned_cols=253 Identities=14% Similarity=0.171 Sum_probs=189.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
..|. ..+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 32 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 32 ANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGEE--EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cceE--EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3455 778999999999999985 68999999999752 2345678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999853 468889999999999999999998 9999999999999999999999999998765
Q ss_pred cccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 593 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 593 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
...... ...+...+.+||......++.++|||||||++|||+||+.|+.+......... ........+. .. ..
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~-~~-~~-- 261 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEQCDYPP-LP-SD-- 261 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH-HHHHTTCSCC-CC-TT--
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH-HHhhcccCCC-Cc-cc--
Confidence 432111 11234457788988888889999999999999999999999864321110000 0000100000 00 01
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.....+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 262 -~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 262 -HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 122456788999999999999999999999998864
No 120
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.8e-38 Score=325.04 Aligned_cols=243 Identities=18% Similarity=0.217 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEcC-CC-------cEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLP-TG-------ITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~-~g-------~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|... +| ..||+|.+.... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 6688999999999999853 33 579999997643 34677899999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--------eEEcccCcc
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFK 589 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--------~kl~DfGla 589 (710)
||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~ 168 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence 99999999999975 378999999999999999999999 9999999999999998887 999999998
Q ss_pred ccccccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
+...... ...+...|.+||.... ..++.++|||||||++|||+||+.|+.......... .......... .
T Consensus 169 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-----~~~~~~~~~~--~ 239 (289)
T 4fvq_A 169 ITVLPKD--ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-----QFYEDRHQLP--A 239 (289)
T ss_dssp TTTSCHH--HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----HHHHTTCCCC--C
T ss_pred ccccCcc--ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-----HHhhccCCCC--C
Confidence 6543211 1112334677887766 678999999999999999999877665433211100 0000000011 1
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.. ...+.+++.+||+.||++|||++|+++.|+++-.
T Consensus 240 ~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 240 PK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CS---SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CC---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 01 1246678889999999999999999999998853
No 121
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2e-37 Score=324.05 Aligned_cols=250 Identities=18% Similarity=0.277 Sum_probs=192.1
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.||+|+||.||+|. ..+|+.||||+++... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 67889999999999998 3578999999997543 2357789999999999999999999999876 6689999
Q ss_pred eecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 521 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 181 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccCCCc
Confidence 99999999999954 578999999999999999999998 999999999999999999999999999976543211
Q ss_pred -----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC---------Ccccccccccccccccc
Q 005177 598 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL---------QNKPIDGLLGEMYNENE 663 (710)
Q Consensus 598 -----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~---------~~~~~~~~~~~~~~~~~ 663 (710)
....+...+.+||......++.++||||+||++|||+||+.|+...... ...........+.....
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T 4e5w_A 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR 261 (302)
T ss_dssp EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC
T ss_pred ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC
Confidence 1112333467888888888889999999999999999999875421100 00000000011111110
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+. .....+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 262 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 262 LPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCC---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11111 1234677899999999999999999999999875
No 122
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=359.05 Aligned_cols=313 Identities=21% Similarity=0.245 Sum_probs=263.7
Q ss_pred ceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccC-CccccCCCCCcEEECcCCCCCCCC
Q 005177 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFSGHF 141 (710)
Q Consensus 63 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (710)
|.|+.|-+ ....++.++++.+.+++..+..+.. +++|++|||++|.+.+.+ |..|.++++|++|+|++|.+++..
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~--l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~ 89 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPF--LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLH 89 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSS--CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEEC
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcc--cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccC
Confidence 46777776 2467889999999999888888888 999999999999777776 778999999999999999999999
Q ss_pred ChhhcCCCCCCEEECCCCCCCcCCchh--ccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCcCCCCCccccc
Q 005177 142 PGGIQSLRNLLVLDAFSNSFSGSVPAE--ISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAELG 218 (710)
Q Consensus 142 p~~l~~L~~L~~L~L~~N~l~~~~p~~--~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 218 (710)
|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+.
T Consensus 90 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred HhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc
Confidence 999999999999999999999877766 9999999999999999987655 5799999999999999999999999988
Q ss_pred cc--ccccccccccccccccCCccccCCCc------cchhccccccCCccCchhccC-----------------------
Q 005177 219 ML--KTVTHMEIGYNFYQGNIPWQLGNMSE------VQYLDIAGANLSGSIPKELSN----------------------- 267 (710)
Q Consensus 219 ~l--~~L~~L~l~~n~~~g~~p~~l~~l~~------L~~L~ls~n~l~g~~p~~l~~----------------------- 267 (710)
.+ ++|+.|+++.|.+.+..|..++.+.+ |+.|++++|.+++.+|..+..
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 87 88999999999998888877776665 888888888777665544322
Q ss_pred ---------------CCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 268 ---------------LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 268 ---------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 25688888888888877777788888888888888888877777888888888888888888877
Q ss_pred CCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 333 VPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
.|..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+++
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 77788888888888888888877767777778888888888887764
No 123
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=330.29 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=193.7
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
+..+.|. ..+.||+|+||.||+|. ..+|+.||||.++.... ..+.+.+|++++++++|||||++++++
T Consensus 21 ~~~~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 21 EYSQKYS--TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp HHHHHEE--EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccceE--EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3455676 78899999999999998 47899999999986431 234577899999999999999999999
Q ss_pred EcCCceeEEEeecCCC-Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 511 YNRHQAYLLYDYLPNG-NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~g-sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
.+++..++||||+.+| +|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999999877 99999976 578999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCCCC-cccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 588 FKYLTQLADGSF-PAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 588 la~~~~~~~~~~-~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
+++......... ..++..|.+||......+ +.++|||||||++|||++|+.|+...... .......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~---- 243 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHP---- 243 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCCCC----
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------HhhccCC----
Confidence 998654322111 124455778888776665 78899999999999999999998642111 0111111
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.. ....+.+++.+|++.||++|||+.|+++.
T Consensus 244 -~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -Ccc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12356788899999999999999999875
No 124
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9e-38 Score=323.48 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=194.8
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc---------
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--------- 512 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--------- 512 (710)
...|. ..+.||+|+||.||+|.. .+|+.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFK--EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEE--EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccc--eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 34566 778999999999999986 489999999998543 356789999999999999999999864
Q ss_pred -------CCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 513 -------RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 513 -------~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
.+..++||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 3458999999999999999953 478999999999999999999998 99999999999999999999
Q ss_pred EEcccCccccccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 582 HLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+|||+++........ ...+...+.+||......++.++|||||||++|||+||+.|+...... .....+
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--------~~~~~~ 233 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF--------FTDLRD 233 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH--------HHHHHT
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH--------HHHhhc
Confidence 99999998765432211 122445577889888888899999999999999999998876422110 011111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
.. . +... ...+.+++.+|++.||++|||+.|+++.|+.++..
T Consensus 234 ~~-~--~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 234 GI-I--SDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp TC-C--CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred cc-c--cccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11 1 1111 13456888999999999999999999999988754
No 125
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=353.52 Aligned_cols=240 Identities=15% Similarity=0.182 Sum_probs=189.9
Q ss_pred hhcCCCCCccEEEEc---CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 453 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.||+|+||.||+|.. .++..||||+++... ...+.+.+|++++++++|||||+++|+|.+ +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 699999999999975 356789999998642 346789999999999999999999999976 56899999999999
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc---c
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP---A 601 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~---~ 601 (710)
|.+++.. .+++..+..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......... .
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999964 478999999999999999999998 999999999999999999999999999987542221111 1
Q ss_pred --cccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 602 --KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 602 --~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
....|.+||+.....++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l~ 569 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECPP---ECPPELY 569 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHHHTTCCCCCCT---TCCHHHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---cCCHHHH
Confidence 1234678898888889999999999999999998 998886433211 011111111011111 1234577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
+++.+||+.||++||+|.++++.|+.+
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 899999999999999999999999765
No 126
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.1e-36 Score=342.09 Aligned_cols=320 Identities=23% Similarity=0.226 Sum_probs=218.3
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISF--LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTT--CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CcCEEECCCCCccccChhhhcc--CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 4556666666666554445555 666666666666666666666666666666666666666 34444 566666666
Q ss_pred CCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC--CeEEecCCcC--CCCCcccccccc---------
Q 005177 156 AFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL--EFLHLAGNLL--NDQIPAELGMLK--------- 221 (710)
Q Consensus 156 L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~--------- 221 (710)
|++|.+++ .+|..|+++++|++|+|++|++++. .+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 66666665 3456666666666666666666542 23334444 6666666666 555555554432
Q ss_pred ------------------------------------------------------------------------cccccccc
Q 005177 222 ------------------------------------------------------------------------TVTHMEIG 229 (710)
Q Consensus 222 ------------------------------------------------------------------------~L~~L~l~ 229 (710)
+|++|+++
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~ 284 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIY 284 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEe
Confidence 55666666
Q ss_pred cccccccCCccc-----------------------------------------------------cCCCccchhcccccc
Q 005177 230 YNFYQGNIPWQL-----------------------------------------------------GNMSEVQYLDIAGAN 256 (710)
Q Consensus 230 ~n~~~g~~p~~l-----------------------------------------------------~~l~~L~~L~ls~n~ 256 (710)
+|.+.|.+|..+ +.+++|++|++++|+
T Consensus 285 ~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~ 364 (562)
T 3a79_B 285 NLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNV 364 (562)
T ss_dssp EEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSC
T ss_pred ccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCc
Confidence 666666666544 556777777777777
Q ss_pred CCccCchhccCCCCCcEEEccccccCCC--CCccccCCCCCCEEEccCCCCCCCCCc-cccCCCCCCEEEcccccCcccC
Q 005177 257 LSGSIPKELSNLTKLESLFLFRNQLAGQ--VPWEFSRVTTLKSLDLSDNRLSGPIPE-SFADLKNLRLLSLMYNEMSGTV 333 (710)
Q Consensus 257 l~g~~p~~l~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~ 333 (710)
+++.+|..+..+++|+.|++++|++++. +|..+..+++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+
T Consensus 365 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 444 (562)
T 3a79_B 365 FTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444 (562)
T ss_dssp CCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG
T ss_pred cccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch
Confidence 7777777777777888888888777752 245567777788888888887774544 4677778888888888877766
Q ss_pred CcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc-ccCCCceeeEecccCCcccchhH
Q 005177 334 PESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD-ICSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 334 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~-~~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|+. +..++.|+.+++++|.+++..+.
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 65554 67888888888887 67777778888888888888888 56766 77778888888888888877653
No 127
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=319.33 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=178.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 11 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 11 EDFK--VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccce--eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 4455 778999999999999985 6899999999975432 24678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999975 468999999999999999999998 9999999999999999999999999998765422
Q ss_pred CCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ...+...+.+||......++.++|||||||++|||+||+.|+........ ........ ...+.. .
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~~---~ 235 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------LNKVVLAD-YEMPSF---L 235 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSC-CCCCTT---S
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------HHHHhhcc-cCCccc---c
Confidence 111 11234457788888777888999999999999999999999874332111 01111111 011111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||++|+++.
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 2456789999999999999999999863
No 128
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.4e-37 Score=328.58 Aligned_cols=244 Identities=21% Similarity=0.270 Sum_probs=191.7
Q ss_pred hhhhhcCCCCCccEEEEc--------CCCcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--------~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
..+.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++++++ +||||++++++|.+++..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 678899999999999985 357789999998643 2356788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCCC
Confidence 99999999999999642 67889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccc
Q 005177 581 PHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLL 655 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 655 (710)
+||+|||+++....... ........|.+||......++.++|||||||++|||+| |+.|+.+.... . ..
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-----~~ 269 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-E-----LF 269 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-H-----HH
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-H-----HH
Confidence 99999999876542211 11112334678888877788999999999999999999 88887643211 0 00
Q ss_pred cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 656 GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+........+. .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus 270 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 270 KLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111110001011 1224567889999999999999999999999876
No 129
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.3e-37 Score=341.26 Aligned_cols=239 Identities=15% Similarity=0.201 Sum_probs=192.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+.+..++||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 678899999999999986 5899999999986432 24578899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 100 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 176 (476)
T 2y94_A 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 176 (476)
T ss_dssp SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence 9999999975 568899999999999999999998 999999999999999999999999999987543211 1222
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
++..|.+||...+..+ +.++||||+||++|||++|+.||.+..... ....+.+.. ...+.. ....+.++
T Consensus 177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~s~~~~~L 246 (476)
T 2y94_A 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT------LFKKICDGI-FYTPQY---LNPSVISL 246 (476)
T ss_dssp SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH------HHHHHHTTC-CCCCTT---CCHHHHHH
T ss_pred CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH------HHHHHhcCC-cCCCcc---CCHHHHHH
Confidence 4556788888776654 688999999999999999999987433211 111111111 111111 12456789
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||++|++++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHhC
Confidence 999999999999999999863
No 130
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.1e-37 Score=328.62 Aligned_cols=259 Identities=18% Similarity=0.201 Sum_probs=194.8
Q ss_pred hhhhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhc--cCCCCceeEEEEEEcCC---
Q 005177 440 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH--- 514 (710)
Q Consensus 440 ~~~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~--- 514 (710)
..+.+.|. ..+.||+|+||.||+|.. +|+.||||.+... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEE--EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 33455677 788999999999999987 6999999999743 34556677787776 78999999999998876
Q ss_pred -ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
..++||||+++|+|.+++.. ..++.++..++.|+++||+||| +. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEE
Confidence 78999999999999999976 5789999999999999999999 55 99999999999999999999999
Q ss_pred ccCccccccccCC------CCcccccccCchhhhhcc------CCccccceeeHHHHHHHHHhC----------CCCCCC
Q 005177 585 EFGFKYLTQLADG------SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNA 642 (710)
Q Consensus 585 DfGla~~~~~~~~------~~~~~~~~~~~~e~~~~~------~~~~~~DVySfGvvl~Elltg----------~~p~~~ 642 (710)
|||+++....... ....+...|.+||..... .++.++|||||||++|||+|| +.|+..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 9999876543221 111234457788876654 234689999999999999999 555543
Q ss_pred CCCCCcccccccccccccccccC-CCc--chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 643 GSSLQNKPIDGLLGEMYNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
...... ........+....... .+. ...+....+.+++.+||+.||++|||+.||+++|+.+.+
T Consensus 270 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 270 LVPSDP-SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TSCSSC-CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCcc-cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 211100 0000001111111000 011 112445678899999999999999999999999998854
No 131
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-37 Score=323.54 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=185.8
Q ss_pred CCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 446 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 446 ~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
|. ..+.||+|+||.||+|.... .||||.++... ...+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 26 y~--~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 26 IT--VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp CE--EEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred ee--eeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 55 77899999999999998643 59999997542 2356789999999999999999999976 45678999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999999954 568899999999999999999998 9999999999999999999999999998754321111
Q ss_pred ---CcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 ---FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+...|.+||... ...++.++|||||||++|||+||+.|+......... ..........+. . ......
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~-~--~~~~~~ 253 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-IEMVGRGSLSPD-L--SKVRSN 253 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH-HHHHHHTSCCCC-T--TSSCTT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH-HHHhcccccCcc-h--hhcccc
Confidence 112344577888765 556788999999999999999999998753321110 000000000111 0 000111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
....+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 254 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 23467789999999999999999999999998865
No 132
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-37 Score=321.29 Aligned_cols=246 Identities=17% Similarity=0.216 Sum_probs=188.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.+.|. ..+.||+|+||.||++.. .+|..||||++.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 20 i~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 20 IDDLFI--FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhee--ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 344566 778999999999999985 678999999998643 235778999999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcc
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFK 589 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla 589 (710)
||||+++|+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999999998853 578999999999999999999998 99999999999999 45678999999999
Q ss_pred ccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
+....... ....+...+.+||... ..++.++|||||||++|||+||+.|+.+...... .... ....+. . ..
T Consensus 175 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~-~~~~---~~~~~~-~--~~ 246 (285)
T 3is5_A 175 ELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-QQKA---TYKEPN-Y--AV 246 (285)
T ss_dssp CC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH---HHCCCC-C--CC
T ss_pred eecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH-Hhhh---ccCCcc-c--cc
Confidence 76543221 1122445577888765 4678899999999999999999999864321100 0000 000000 0 00
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
........+.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011245678999999999999999999986
No 133
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.1e-37 Score=337.03 Aligned_cols=241 Identities=15% Similarity=0.167 Sum_probs=183.5
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHh-ccCCCCceeEEEEEEc----CCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIG-TVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~----~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||++.. .+|+.||||+++.. ..+.+|++++. ..+|||||++++++.. ++..|+|||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 6799999999999985 67999999999743 34667777764 4589999999999875 5678999999999
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccCC-
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~- 597 (710)
|+|.+++.. .+++..+..|+.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~ 220 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence 999999975 368999999999999999999998 9999999999999997 78999999999986543221
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....++.+|.+||+.....++.++|||||||++|||+||+.||........... ....+.........+.+......+
T Consensus 221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~ 298 (400)
T 1nxk_A 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFPNPEWSEVSEEV 298 (400)
T ss_dssp ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCCCcccccCCHHH
Confidence 122245568888998888899999999999999999999999975432211000 000111110000011112233567
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||+.|++++
T Consensus 299 ~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 299 KMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHCCCChhHCcCHHHHhcC
Confidence 789999999999999999999875
No 134
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-37 Score=324.73 Aligned_cols=249 Identities=10% Similarity=0.001 Sum_probs=194.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++.++ +|+|++++++++.+++..++||||+ +|+
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 778899999999999984 789999999987543 345678899999998 7999999999999999999999999 899
Q ss_pred hhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-----eEEcccCccccccccCC--
Q 005177 528 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 528 L~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~-----~kl~DfGla~~~~~~~~-- 597 (710)
|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 92 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (298)
T 1csn_A 92 LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168 (298)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCC
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccc
Confidence 9999974 478999999999999999999998 9999999999999988776 99999999986543211
Q ss_pred -------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC-Ccc
Q 005177 598 -------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSS 669 (710)
Q Consensus 598 -------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 669 (710)
....++..|.+||......++.++|||||||++|||+||+.|+.......... ....+........ ...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 245 (298)
T 1csn_A 169 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ---KYERIGEKKQSTPLREL 245 (298)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH---HHHHHHHHHHHSCHHHH
T ss_pred cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH---HHHHHHhhccCccHHHH
Confidence 11123445778898888889999999999999999999999987533211100 0011100000000 000
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 670 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 670 ~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.......+.+++.+||+.||++||+++++++.|+++.
T Consensus 246 ~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 246 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 0012346778999999999999999999999998763
No 135
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.6e-37 Score=320.23 Aligned_cols=247 Identities=17% Similarity=0.175 Sum_probs=193.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.|. ..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 6 DNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhh--hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3455 778899999999999985 679999999997643 2356688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGla~~~~~ 594 (710)
|||+++|+|.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988865 578999999999999999999998 9999999999999987655 99999999876543
Q ss_pred cCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ....+...+.+||......++.++||||+||++|||++|+.|+........ ...+.........+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 234 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL------YAQIKAGAYDYPSPEWDTV 234 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHTCCCCCTTTTTTS
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH------HHHHHhccccCCchhhccc
Confidence 221 112244557788988888889999999999999999999999864332110 0011000000001111122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 3457789999999999999999999874
No 136
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-37 Score=335.46 Aligned_cols=243 Identities=12% Similarity=-0.012 Sum_probs=172.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHH---HHHhccCCCCceeEE-------EEEEcC-
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNR- 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~- 513 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+ +.|++ +|||||+++ +++..+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 778999999999999985 689999999998743 2355677774 45555 799988755 455433
Q ss_pred ----------------CceeEEEeecCCCChhhhhhc---CCCHHHH------HHHHHHHHHHHHHHhcCCCCCceecCC
Q 005177 514 ----------------HQAYLLYDYLPNGNLSEKIRT---KRDWAAK------YKIVLGVARGLCFLHHDCYPAIPHGDL 568 (710)
Q Consensus 514 ----------------~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~------~~i~~~ia~gL~yLH~~~~~~iiHrDl 568 (710)
...++|||||+ |+|.+++.. ...+..+ ..++.|+++||+|||+. +|+||||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDi 220 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHF 220 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcC
Confidence 23799999999 899999975 3455556 78889999999999998 9999999
Q ss_pred CCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCC
Q 005177 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL 646 (710)
Q Consensus 569 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~ 646 (710)
||+|||++.++.+||+|||+++...........+ ..|.+||.... ..++.++|||||||++|||+||+.||......
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t-~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVP-VTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSC-GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCccCccCC-cCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 9999999999999999999998664322112223 55788898876 67899999999999999999999999854322
Q ss_pred Ccccccc-cccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 647 QNKPIDG-LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 647 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....... ......... .. .+........+.+++.+||+.||++|||+.|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDS-LA-FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCS-CC-CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccc-cc-hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 000000101 00 0111122346778999999999999999999875
No 137
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.8e-37 Score=319.14 Aligned_cols=245 Identities=19% Similarity=0.227 Sum_probs=188.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC-CceeEEEeec
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYL 523 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey~ 523 (710)
.|. ..+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 22 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 22 ELK--LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GEE--EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hce--EEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 355 778899999999999987 58899999998543 456788999999999999999999998654 4789999999
Q ss_pred CCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 524 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 524 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999975 268889999999999999999998 99999999999999999999999999987654322211
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
.....+.+||......++.++||||||+++|||+| |+.|+...... . ....+........+. .....+.
T Consensus 175 -~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~-----~~~~~~~~~~~~~~~---~~~~~l~ 244 (278)
T 1byg_A 175 -KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-D-----VVPRVEKGYKMDAPD---GCPPAVY 244 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-G-----HHHHHTTTCCCCCCT---TCCHHHH
T ss_pred -CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-H-----HHHHHhcCCCCCCcc---cCCHHHH
Confidence 22334778888888889999999999999999999 88887643211 1 011111110011011 1224567
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 679 DVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+++.+||+.||++|||+.|+++.|+.++
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 245 EVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 8889999999999999999999998875
No 138
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.2e-36 Score=343.33 Aligned_cols=246 Identities=22% Similarity=0.231 Sum_probs=137.3
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|.+++..+..|.++++|++|++++|+++ .+|..+.++++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|
T Consensus 264 n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 342 (606)
T 3t6q_A 264 HYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELG 342 (606)
T ss_dssp CCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCC
T ss_pred CccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccc
Confidence 3333333334556667777777777766 566666777777777777777666666666666666666666666665554
Q ss_pred cc-ccCCCccchhccccccCCccC--chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCcc-cc
Q 005177 239 WQ-LGNMSEVQYLDIAGANLSGSI--PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPES-FA 314 (710)
Q Consensus 239 ~~-l~~l~~L~~L~ls~n~l~g~~--p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~ 314 (710)
.. ++++++|++|++++|++++.. |..+..+++|++|++++|.+.+..|..+..+++|+.|++++|++.+..|.. +.
T Consensus 343 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 422 (606)
T 3t6q_A 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422 (606)
T ss_dssp SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTT
T ss_pred hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhh
Confidence 43 555666666666666555443 444555555555555555555555555555555555555555555443322 45
Q ss_pred CCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC---CCCcccCCCCCCcEEECCCCcCCccCcccccCCCce
Q 005177 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG---SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391 (710)
Q Consensus 315 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g---~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L 391 (710)
.+++|+.|++++|.+++..|..+..+++|++|++++|.+++ ..+..+..+++|+.|++++|.+++..|..+..++.|
T Consensus 423 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 502 (606)
T 3t6q_A 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM 502 (606)
T ss_dssp TCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCC
Confidence 55555555555555555555555555555555555555543 122334445555555555555555445555555555
Q ss_pred eeEecccCCcccch
Q 005177 392 FKLILFSNNFTGIV 405 (710)
Q Consensus 392 ~~l~l~~N~l~g~i 405 (710)
+.|++++|++++..
T Consensus 503 ~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 503 NHVDLSHNRLTSSS 516 (606)
T ss_dssp CEEECCSSCCCGGG
T ss_pred CEEECCCCccCcCC
Confidence 55555555555443
No 139
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.2e-37 Score=319.69 Aligned_cols=247 Identities=16% Similarity=0.145 Sum_probs=193.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 7 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYT--LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEE--eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 344566 778999999999999985 567899999998642 3467789999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~ 594 (710)
|||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999999998865 568999999999999999999998 99999999999999 7889999999999876543
Q ss_pred cCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 595 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 595 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ....+...+.+||.... .++.++|||||||++|||+||+.|+....... ....+...............
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 3f3z_A 162 GKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE------VMLKIREGTFTFPEKDWLNV 234 (277)
T ss_dssp TSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCHHHHTTS
T ss_pred ccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCchhhhcC
Confidence 221 11224455778887654 48889999999999999999999986432111 01111111100000011122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 235 SPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 356778999999999999999999975
No 140
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-36 Score=334.61 Aligned_cols=314 Identities=18% Similarity=0.145 Sum_probs=290.0
Q ss_pred eeeeeeCCCC---------CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 65 WSGVKCNKNN---------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 65 w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
|..|.|.... ..+..++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFAS--FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccC--CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 5678887521 25678999999999887777877 999999999999999988999999999999999999
Q ss_pred CCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcc
Q 005177 136 NFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA 215 (710)
Q Consensus 136 ~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 215 (710)
++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|+.|++++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99987777889999999999999999999999999999999999999999998899999999999999999999987778
Q ss_pred cccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCC
Q 005177 216 ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295 (710)
Q Consensus 216 ~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 295 (710)
.+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+|.......+|+.|++++|++++..+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999999888899999999999999999988888887777899999999999996555678999999
Q ss_pred CEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 296 KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 296 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999888889999999999999999999999999999999999999999999877778899999999999999
Q ss_pred cCCcc
Q 005177 376 NFNGS 380 (710)
Q Consensus 376 ~l~g~ 380 (710)
.+...
T Consensus 331 ~l~c~ 335 (477)
T 2id5_A 331 PLACD 335 (477)
T ss_dssp CEECS
T ss_pred CccCc
Confidence 99864
No 141
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.7e-36 Score=340.35 Aligned_cols=312 Identities=22% Similarity=0.257 Sum_probs=244.3
Q ss_pred EEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC
Q 005177 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 78 ~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 157 (710)
..++++++++++ +|..+ .+.|++|+|++|.+++..|..|.++++|++|+|++|++++..|+.|.++++|++|||+
T Consensus 34 ~~l~ls~~~L~~-ip~~~----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDL----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CEEECTTSCCCS-CCTTS----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred cEEEcCCCCCcc-CCCCC----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 567899999986 77655 3689999999999998888899999999999999999999999999999999999999
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccc--cccccccccc-
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY- 233 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~~- 233 (710)
+|.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++. .+..+++| +.|+++.|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 57776 89999999999999987 4578999999999999999999864 44455555 9999999988
Q ss_pred -cccCCccccCCC-------------------------------------------------------------------
Q 005177 234 -QGNIPWQLGNMS------------------------------------------------------------------- 245 (710)
Q Consensus 234 -~g~~p~~l~~l~------------------------------------------------------------------- 245 (710)
++..|..+..+.
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCc
Confidence 776666655433
Q ss_pred --------------ccchhccccccCCccCchhc----------------------------------------------
Q 005177 246 --------------EVQYLDIAGANLSGSIPKEL---------------------------------------------- 265 (710)
Q Consensus 246 --------------~L~~L~ls~n~l~g~~p~~l---------------------------------------------- 265 (710)
+|++|++++|+++|.+|..+
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~ 342 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTP 342 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSC
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCC
Confidence 67777788888887777655
Q ss_pred -------cCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC--CCCccccCCCCCCEEEcccccCcccCCc-
Q 005177 266 -------SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG--PIPESFADLKNLRLLSLMYNEMSGTVPE- 335 (710)
Q Consensus 266 -------~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~- 335 (710)
..+++|++|++++|.+++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+|.
T Consensus 343 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 422 (562)
T 3a79_B 343 FIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR 422 (562)
T ss_dssp CCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC
T ss_pred cccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh
Confidence 456677777777777777667677777777777777777765 2345567777777777777777764444
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCccc
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g 403 (710)
.+..+++|++|++++|.+++.+|..+. ++|+.|++++|+++ .+|+.+..++.|+.|++++|+++.
T Consensus 423 ~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 423 TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 366667777777777777766665543 56777777777776 577777677777777777777774
No 142
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=322.48 Aligned_cols=245 Identities=17% Similarity=0.200 Sum_probs=191.1
Q ss_pred hhhhhcCCCCCccEEEEc-C---CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce-eEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-P---TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~---~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lv~Ey 522 (710)
..+.||+|+||.||+|.. . ++..||||.+.... ...+.+.+|++++++++|||||++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 457899999999999984 2 23479999997533 2356788999999999999999999999876655 999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 596 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 596 (710)
+.+|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 105 MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred ccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 999999999975 467889999999999999999999 99999999999999999999999999987542211
Q ss_pred ---CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 ---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 ---~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.........+.+||......++.++|||||||++|||+||+.|+.......... ..+........+.. .
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~ 253 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT-----HFLAQGRRLPQPEY---C 253 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH-----HHHHTTCCCCCCTT---C
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH-----HHhhcCCCCCCCcc---c
Confidence 111123345778888888888999999999999999999887766443221110 01111110111111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
...+.+++.+|++.||++|||++|+++.|+++
T Consensus 254 ~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 254 PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 24577889999999999999999999999876
No 143
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.7e-37 Score=328.79 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=185.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 514 (710)
+.|. ..+.||+|+||.||++.. .+|+.||||.++... .....+.+|++++++++|||||++++++.+++
T Consensus 17 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 17 ECFE--LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGEE--EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred HHeE--EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 3455 778999999999999985 578999999998642 23456788999999999999999999999999
Q ss_pred ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999999965 568888999999999999999998 9999999999999999999999999998754
Q ss_pred cccCC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 593 QLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 593 ~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
..... ....++..|.+||......++.++|||||||++|||++|+.||.+..... ....+.... ...+..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~-~~~p~~- 243 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK------TIDKILKCK-LNLPPY- 243 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTC-CCCCTT-
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC-CCCCCC-
Confidence 32211 11224455788898888888999999999999999999999987433211 111111111 111111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
....+.+++.+|++.||++|| ++.|++++
T Consensus 244 --~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 244 --LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 124567889999999999999 77788763
No 144
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-36 Score=342.11 Aligned_cols=328 Identities=20% Similarity=0.218 Sum_probs=210.0
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..++++++.+++..+..+.. +++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTT--CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccEEEccCCccCccChhHhhC--CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 4677888888887766666666 78888888888888776677788888888888888888877777788888888888
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccc------------
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT------------ 222 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~------------ 222 (710)
+++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 88888776555567788888888888887776 46777777888888877777765544433333222
Q ss_pred --------------------------------------------------------------------------------
Q 005177 223 -------------------------------------------------------------------------------- 222 (710)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (710)
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence
Q ss_pred -----------------ccccccccccccccCCccc------------------------------------------cC
Q 005177 223 -----------------VTHMEIGYNFYQGNIPWQL------------------------------------------GN 243 (710)
Q Consensus 223 -----------------L~~L~l~~n~~~g~~p~~l------------------------------------------~~ 243 (710)
|+.|++++|.+. .+|..+ ..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 222222222222 111110 23
Q ss_pred CCccchhccccccCCccC--chh-----------------------ccCCCCCcEEEccccccCCCCC-ccccCCCCCCE
Q 005177 244 MSEVQYLDIAGANLSGSI--PKE-----------------------LSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKS 297 (710)
Q Consensus 244 l~~L~~L~ls~n~l~g~~--p~~-----------------------l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~ 297 (710)
+++|++|++++|++++.. |.. +..+++|+.|++++|.+.+..| ..+.++++|++
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 455556666666555332 334 4444555555555555554443 34555666666
Q ss_pred EEccCCCCCCCCCccccCCCCCCEEEcccccCc-ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCc
Q 005177 298 LDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376 (710)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~ 376 (710)
|++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 666666666666666666666666666666665 4566666666666666666666666656666666666666666666
Q ss_pred CCccCcccccCCCceeeEecccCCcccchh
Q 005177 377 FNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 377 l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++..|..+..+++|+.+++++|.+++..|
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 666555556666666666666666666554
No 145
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.1e-37 Score=333.08 Aligned_cols=250 Identities=12% Similarity=0.070 Sum_probs=189.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCC------CcEEEEEEeeccchh------------HHHHHHHHHHHhccCCCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPT------GITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRL 506 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~------g~~vAvK~l~~~~~~------------~~~~~~e~~~l~~l~H~niv~l 506 (710)
.|. ..+.||+|+||.||+|.... ++.||||.+...... ...+.+|+..+.+++|||||++
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 36 AWK--VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp EEE--EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred eEE--EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 465 78899999999999998643 578999998764321 1223445667788899999999
Q ss_pred EEEEEcC----CceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--C
Q 005177 507 LGFCYNR----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--E 577 (710)
Q Consensus 507 ~g~~~~~----~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~ 577 (710)
++++... ...++||||+ +|+|.+++.. .+++..+..|+.|+++||+|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9999775 4589999999 9999999964 478999999999999999999999 999999999999999 8
Q ss_pred CCceEEcccCccccccccCCC---------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc
Q 005177 578 NMEPHLAEFGFKYLTQLADGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 648 (710)
Q Consensus 578 ~~~~kl~DfGla~~~~~~~~~---------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~ 648 (710)
++.+||+|||+++........ ...++..|.+||...+..++.++|||||||++|||+||+.||.+......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 899999999999765322111 11144457788988888899999999999999999999999974322211
Q ss_pred cccc------ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 649 KPID------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 649 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.... .......++. .. .. .....+.+++..||+.+|++||++.++++.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKC-FP-AA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHH-SC-TT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHh-cc-cc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1100 0011111111 00 00 1124567888999999999999999999998765
No 146
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-37 Score=331.50 Aligned_cols=192 Identities=16% Similarity=0.186 Sum_probs=167.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-----CCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~g~~~~~~~~~ 517 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+..|++++++++ |||||++++++...+..+
T Consensus 35 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 35 NAFL--VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred CEEE--EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 4455 788999999999999986 67899999999866556677788999998886 999999999999999999
Q ss_pred EEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC----------------
Q 005177 518 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---------------- 577 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---------------- 577 (710)
+||||+ +|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 8999999975 368899999999999999999998 9999999999999985
Q ss_pred ---------CCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 578 ---------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 578 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
++.+||+|||+++......... .++..|.+||......++.++|||||||++|||+||+.||..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGSI-INTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCCSC-CSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCCEEEEeccCceecCCCCcCc-cCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 7899999999998654332222 234457888988888899999999999999999999999864
No 147
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.6e-37 Score=354.74 Aligned_cols=241 Identities=16% Similarity=0.197 Sum_probs=190.0
Q ss_pred hhhcCCCCCccEEEEc---CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 452 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++|||||+++++|.+ +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 4578999999986432 35789999999999999999999999965 568999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC----
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 599 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~---- 599 (710)
|+|.+++.. ..++..+..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999975 578999999999999999999998 99999999999999999999999999998654322111
Q ss_pred -cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 600 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 600 -~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
......|.+||+.....++.++|||||||++|||+| |+.|+.+..... ....+........+. .....+
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~---~~~~~l 601 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCPA---GCPREM 601 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCCHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCCHHH
Confidence 112233678898888889999999999999999999 999886433211 001111111011111 123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+++.+||+.||++||++.++++.|+++
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 7899999999999999999999999865
No 148
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.6e-38 Score=331.54 Aligned_cols=248 Identities=16% Similarity=0.146 Sum_probs=187.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCc-
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ- 515 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~- 515 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++.+++|||||++++++...+.
T Consensus 10 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 10 LSDRYE--LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp ETTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ecCcEE--EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 344565 778999999999999985 7899999999986422 24568899999999999999999999887554
Q ss_pred ---eeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 516 ---AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 516 ---~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.++||||+++|+|.++++. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred CcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 3999999999999999965 578999999999999999999998 99999999999999999999999999997
Q ss_pred cccccCCC-----CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 591 LTQLADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 591 ~~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
........ ...+...|.+||......++.++|||||||++|||+||+.||.+...... ..+........
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~------~~~~~~~~~~~ 238 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV------AYQHVREDPIP 238 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHHCCCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHhcCCCCC
Confidence 65432111 11134557788988888899999999999999999999999864332110 00111111000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
...........+.+++.+||+.||++||++.+++.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 00000112345778999999999999997666554
No 149
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-37 Score=344.27 Aligned_cols=243 Identities=13% Similarity=0.074 Sum_probs=186.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++... .....+.+|++++++++|||||+++++|.+.+..++
T Consensus 148 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 148 NEFE--YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred HHcE--EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3455 778999999999999985 679999999998532 234567789999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||||++|+|.+++.. .+++.....++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999999865 56899999999999999999998 7 9999999999999999999999999999753222
Q ss_pred CC--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.. ....++..|.+||+.....++.++|||||||++|||+||+.||....... ....+.... ...+.. .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~~~p~~---~ 372 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-IRFPRT---L 372 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---S
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHHHHhCC-CCCCcc---C
Confidence 11 12224556888899888889999999999999999999999986433211 111111111 111111 1
Q ss_pred HHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
...+.+++.+||+.||++|| +++|++++
T Consensus 373 ~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 24567899999999999999 99999863
No 150
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-37 Score=330.91 Aligned_cols=249 Identities=17% Similarity=0.216 Sum_probs=190.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||++.. .+|+.||||.++.... ...+|++++.++ +|||||++++++.+++..|+|
T Consensus 20 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYE--VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 345566 778999999999999986 5799999999986432 345678888877 799999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC----CceEEcccCcccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYLTQ 593 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~~~~ 593 (710)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++.++ +.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 999999999999865 468889999999999999999999 99999999999998543 359999999998654
Q ss_pred ccCCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 594 LADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
..... ...++..|.+||......++.++||||+||++|||++|+.||....... .......+...........+.
T Consensus 172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~~~~ 248 (342)
T 2qr7_A 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARIGSGKFSLSGGYWN 248 (342)
T ss_dssp CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHHHHCCCCCCSTTTT
T ss_pred CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHHccCCcccCccccc
Confidence 32221 1224556788898877778889999999999999999999987432111 001111111111011111112
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 249 ~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 233567789999999999999999998763
No 151
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.5e-37 Score=338.63 Aligned_cols=250 Identities=15% Similarity=0.122 Sum_probs=187.2
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++|||||++++++
T Consensus 132 ~~~~~y~--~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 209 (419)
T 3i6u_A 132 ALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 209 (419)
T ss_dssp HHHTTEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred hhhccEE--EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3445566 778999999999999985 6789999999986321 123478899999999999999999998
Q ss_pred EcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAE 585 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~D 585 (710)
.. +..++||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred ec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 64 557999999999999999865 568999999999999999999998 99999999999999754 4599999
Q ss_pred cCccccccccCCC-CcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 586 FGFKYLTQLADGS-FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 586 fGla~~~~~~~~~-~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
||+++........ ...++..|.+||+.. ...++.++|||||||++|||+||+.||........ . ...+...
T Consensus 286 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~----~~~i~~~ 360 (419)
T 3i6u_A 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-L----KDQITSG 360 (419)
T ss_dssp SSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-H----HHHHHTT
T ss_pred cccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-H----HHHHhcC
Confidence 9999876432211 122445577888764 35678899999999999999999999874332111 0 0111111
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+..+......+.+++.+|++.||++|||+.|++++
T Consensus 361 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1000011111234567899999999999999999999874
No 152
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=323.38 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=188.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhcc---CCCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTV---RHKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~ 513 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|+++++++ +|||||+++++|...
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 9 SRYE--PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp -CCE--EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4455 788999999999999995 6799999999974321 134566777776665 499999999999875
Q ss_pred C-----ceeEEEeecCCCChhhhhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 514 H-----QAYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 514 ~-----~~~lv~Ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
+ ..++||||+. |+|.+++... +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4799999997 6999999762 68999999999999999999999 99999999999999999999999
Q ss_pred ccCccccccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------c
Q 005177 585 EFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------N 648 (710)
Q Consensus 585 DfGla~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~ 648 (710)
|||+++......... ..++..|.+||......++.++|||||||++|||+||+.||.+..... .
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999998654322221 124556788898888889999999999999999999999986432211 0
Q ss_pred cccccccc-ccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 649 KPIDGLLG-EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 649 ~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
|....... ....+. ..... .+....+.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPR---GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCC---CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCC---CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 10000000 000000 00000 1123467789999999999999999999864
No 153
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-37 Score=318.02 Aligned_cols=241 Identities=17% Similarity=0.175 Sum_probs=173.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
..|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 13 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 13 GNYQ--IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp CCBC--CCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cceE--EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 4466 778999999999999985 679999999997532 225678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+ +|++.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 91 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred Eehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 99999 6788888765 578999999999999999999999 99999999999999999999999999987654322
Q ss_pred C-CCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....+...+.+||......+ +.++||||+||++|||+||+.|+....... ....+.... ...+.. ..
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~ 236 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV------LFKNISNGV-YTLPKF---LS 236 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-CCCCTT---SC
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CCCCcc---CC
Confidence 1 11224445778887766554 688999999999999999999986432111 011111111 111111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 45678999999999999999999976
No 154
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-37 Score=318.02 Aligned_cols=241 Identities=15% Similarity=0.172 Sum_probs=190.8
Q ss_pred hhhcCCCCCccEEEEc---CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 452 EEAARPQSAAGCKAVL---PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..||+|+||.||+|.. .++..||||.++.. ....+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 3899999999999985 36889999999864 23467789999999999999999999999 456789999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-----C
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-----S 598 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-----~ 598 (710)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 171 (287)
T 1u59_A 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171 (287)
T ss_dssp EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence 99999954 478999999999999999999998 999999999999999999999999999876532211 1
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
...+...+.+||......++.++|||||||++|||+| |+.|+....... ....+........+. .....+
T Consensus 172 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~~~~~~~---~~~~~l 242 (287)
T 1u59_A 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECPP---ECPPEL 242 (287)
T ss_dssp SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCCCT---TCCHHH
T ss_pred cccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCCcCCCCC---CcCHHH
Confidence 1112344778888887788999999999999999999 998886433211 000111110011111 123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.+++.+||+.||++||++.|+++.|+.+
T Consensus 243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 243 YALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 7889999999999999999999999876
No 155
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.1e-37 Score=323.56 Aligned_cols=250 Identities=17% Similarity=0.219 Sum_probs=195.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC------CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|... +++.||||.+.... .....+.+|++++++++||||+++++++.+++.
T Consensus 25 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 25 EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp GGEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhee--eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 3455 7789999999999999753 47899999997543 235568899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEE
Q 005177 516 AYLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 583 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl 583 (710)
.++||||+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEE
Confidence 9999999999999999864 347889999999999999999999 9999999999999999999999
Q ss_pred cccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++........ ...+...+.+||......++.++|||||||++|||+| |+.|+...... . ....+
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~-----~~~~~ 253 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-Q-----VLRFV 253 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-H-----HHHHH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-H-----HHHHH
Confidence 999998765322111 1112344778888888889999999999999999999 67776532211 0 01111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
........+. .....+.+++.+|++.||++|||+.|+++.|+++..
T Consensus 254 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 MEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111011111 122456788999999999999999999999988743
No 156
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-37 Score=328.74 Aligned_cols=253 Identities=20% Similarity=0.245 Sum_probs=195.0
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E 521 (710)
..+.||+|+||.||+|. ..+|..||||++.... ...+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 77899999999999998 3578999999998653 345678999999999999999999999874 456899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 183 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183 (327)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSE
T ss_pred ecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCCcc
Confidence 9999999999965 478999999999999999999998 999999999999999999999999999986542211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC--------cccccccccccccccccC
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ--------NKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 665 (710)
....+...|.+||......++.++|||||||++|||+||+.|+....... .........+.......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (327)
T 3lxl_A 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR- 262 (327)
T ss_dssp EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC-
T ss_pred ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccC-
Confidence 11113344678888888888999999999999999999999876321100 00000000011111100
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
.+........+.+++.+|++.||++|||+.|++++|+.+..
T Consensus 263 -~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 263 -LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred -CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111223457789999999999999999999999988754
No 157
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=9.1e-38 Score=342.28 Aligned_cols=247 Identities=17% Similarity=0.101 Sum_probs=192.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+.++.+++|||||+++++|.+++..|+
T Consensus 74 ~~y~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 74 EDFE--ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred hheE--EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 4466 778999999999999986 5689999999985322 23448899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||||++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 152 V~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 9999999999999965 568999999999999999999998 9999999999999999999999999999765332
Q ss_pred CC---CCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-ccCC
Q 005177 596 DG---SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGS 666 (710)
Q Consensus 596 ~~---~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 666 (710)
.. ....++.+|.+||+.. ...++.++|||||||++|||+||+.||.+...... ...+.... ....
T Consensus 229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKERFQF 302 (437)
T ss_dssp SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTHHHHCCC
T ss_pred CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH------HHhhhhccccccC
Confidence 21 1123455678888876 45688899999999999999999999975432110 11111100 0000
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~--RPs~~evl~~ 701 (710)
+.........+.+++.+|+..+|++ ||+++|++++
T Consensus 303 p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1111112345678888999888888 9999999864
No 158
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.5e-37 Score=332.12 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=194.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch--hHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+.+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 678899999999999986 5699999999986432 3567789999999999999999999998765 6799999999
Q ss_pred CCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCcccccccc
Q 005177 525 NGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 525 ~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~~~~~~ 595 (710)
+|+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 9999999975 278999999999999999999998 99999999999999 77888999999999865432
Q ss_pred CCC-CcccccccCchhhhhc--------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc--ccccccc--------
Q 005177 596 DGS-FPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLG-------- 656 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~--------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~--~~~~~~~-------- 656 (710)
... ...+...|.+||.... ..++.++|||||||++|||+||+.||......... .......
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 211 1223445777887654 45778899999999999999999998632211100 0000000
Q ss_pred cc---------ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 657 EM---------YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 657 ~~---------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ..................+.+++.+|++.||++||+++|+++.++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 00 000000011112445566779999999999999999999999887653
No 159
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.4e-37 Score=319.73 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=190.0
Q ss_pred hhhhhcCCCCCccEEEEcCC----CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEc-CCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPT----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|...+ +..||||.+.... ...+.+.+|++++++++||||++++++|.+ ++..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 66889999999999998532 3468999987532 245678899999999999999999999754 5678999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 185 (298)
T 3f66_A 109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185 (298)
T ss_dssp CTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccchhc
Confidence 999999999965 467889999999999999999998 999999999999999999999999999976532211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
....+...+.+||......++.++||||+||++|||+||+.|+..+........ ..........+...
T Consensus 186 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--- 257 (298)
T 3f66_A 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRRLLQPEYC--- 257 (298)
T ss_dssp C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH-----HHHTTCCCCCCTTC---
T ss_pred cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhcCCCCCCCccC---
Confidence 111123346788888888899999999999999999997666553332221111 11111101111111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+|++.||++|||++|+++.|+++.
T Consensus 258 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 235678899999999999999999999998764
No 160
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-35 Score=345.24 Aligned_cols=300 Identities=21% Similarity=0.200 Sum_probs=229.9
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
..++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTR--YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGG--GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhC--CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 36888999999998866666777 8999999999999999889999999999999999999997666689999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccc--cccccccccccccc
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGYNF 232 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~n~ 232 (710)
+|++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..|..+. .+++|+.|++++|.
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999987788899999999999999999998899999999999999999999887777654 45889999999998
Q ss_pred ccccCCccccCC---------------------------CccchhccccccCCccCchhccCCCC--CcEEEccccccCC
Q 005177 233 YQGNIPWQLGNM---------------------------SEVQYLDIAGANLSGSIPKELSNLTK--LESLFLFRNQLAG 283 (710)
Q Consensus 233 ~~g~~p~~l~~l---------------------------~~L~~L~ls~n~l~g~~p~~l~~l~~--L~~L~L~~n~l~~ 283 (710)
+++..|..+..+ ++|+.|++++|++++..|..+..++. |+.|++++|.+++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 887777655543 34556666666666666666666543 7777777777777
Q ss_pred CCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc-----cCCc----ccCCCCCCcEEeccCCCCC
Q 005177 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-----TVPE----SLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-----~~p~----~~~~l~~L~~L~L~~N~l~ 354 (710)
..|..|..+++|++|++++|++.+..|..|..+++|+.|++++|...+ .+|. .+..+++|++|++++|.++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 666667777777777777777776666666666666666666554432 2222 4555666666666666666
Q ss_pred CCCCcccCCCCCCcEEECCCCc
Q 005177 355 GSLPENLGRNSKLRWVDVSTNN 376 (710)
Q Consensus 355 g~~p~~l~~~~~L~~L~ls~N~ 376 (710)
+..|..+..+++|+.|++++|.
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSF 364 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCB
T ss_pred CCChhHhccccCCcEEECCCCc
Confidence 6555555555555555555444
No 161
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.7e-37 Score=325.84 Aligned_cols=252 Identities=19% Similarity=0.240 Sum_probs=194.8
Q ss_pred hhhhhcCCCCCccEEEEc-----CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC--CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 520 (710)
..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 678899999999998863 378999999998643 3356789999999999999999999999874 5789999
Q ss_pred eecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 521 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
||+++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 99999999999976 578999999999999999999999 999999999999999999999999999986543211
Q ss_pred ---CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCC----Cccccc----ccccccccccccCC
Q 005177 598 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL----QNKPID----GLLGEMYNENEVGS 666 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~----~~~~~~----~~~~~~~~~~~~~~ 666 (710)
....+..++.+||......++.++|||||||++|||+||+.|+...... ..+... ....+.......
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 269 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-- 269 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC--
Confidence 1112334467888888888889999999999999999999987632110 000000 000111111100
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.+........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 0011122346778999999999999999999999998764
No 162
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.5e-37 Score=321.59 Aligned_cols=246 Identities=18% Similarity=0.159 Sum_probs=185.7
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhc-cCCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++.+ .+||||+++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 6799999999999985 6899999999976432 35678899999988 4799999999999999999999999999999
Q ss_pred hhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcccCccccccccCC------
Q 005177 529 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQLADG------ 597 (710)
Q Consensus 529 ~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~DfGla~~~~~~~~------ 597 (710)
.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 99 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 175 (316)
T 2ac3_A 99 LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175 (316)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccc
Confidence 999965 578899999999999999999999 9999999999999998766 99999999875432110
Q ss_pred ---CCcccccccCchhhhhc-----cCCccccceeeHHHHHHHHHhCCCCCCCCCCC-Ccccccc--------ccccccc
Q 005177 598 ---SFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL-QNKPIDG--------LLGEMYN 660 (710)
Q Consensus 598 ---~~~~~~~~~~~~e~~~~-----~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~-~~~~~~~--------~~~~~~~ 660 (710)
....++..|.+||.... ..++.++|||||||++|||+||+.||...... ..|.... ....+..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 255 (316)
T 2ac3_A 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255 (316)
T ss_dssp ------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH
T ss_pred cccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc
Confidence 01113445777887654 45788999999999999999999998754321 1111110 0111111
Q ss_pred ccccCCCc-chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 ENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~~~~~~~~-~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ...+. ........+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 256 GK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11 11010 011123567899999999999999999999874
No 163
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.6e-37 Score=316.83 Aligned_cols=244 Identities=17% Similarity=0.170 Sum_probs=189.9
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... ++..||||.+... ....+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 6788999999999999852 2457999999864 2346778999999999999999999999865 4578999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 171 (281)
T 3cc6_A 95 PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171 (281)
T ss_dssp TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--------
T ss_pred CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccccccc
Confidence 99999999964 478999999999999999999998 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
........+.+||......++.++|||||||++|||+| |+.|+........ ...+........+.. ....
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~ 242 (281)
T 3cc6_A 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGDRLPKPDL---CPPV 242 (281)
T ss_dssp -CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH------HHHHHHTCCCCCCTT---CCHH
T ss_pred ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH------HHHHhcCCCCCCCCC---CCHH
Confidence 11112334778888888889999999999999999999 9998864322110 001111100111111 1245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 678899999999999999999999998763
No 164
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-37 Score=325.14 Aligned_cols=245 Identities=19% Similarity=0.260 Sum_probs=189.1
Q ss_pred hhhhhcCCCCCccEEEEcCC-----CcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~-----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.... +..||||.++... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 56889999999999998532 3469999998642 2356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 999999999965 478999999999999999999998 99999999999999999999999999988654321111
Q ss_pred -----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 600 -----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 600 -----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
......+.+||......++.++|||||||++|||+| |+.|+....... ....+.+......+. ..
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~~~~~~~~~~~---~~ 275 (333)
T 1mqb_A 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAINDGFRLPTPM---DC 275 (333)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCT---TC
T ss_pred cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHCCCcCCCcc---cC
Confidence 111234678888888889999999999999999999 888886432110 111111111011111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 345678899999999999999999999998763
No 165
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6e-37 Score=324.53 Aligned_cols=248 Identities=22% Similarity=0.288 Sum_probs=192.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcE--EEEEEeecc--chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWG--ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~--vAvK~l~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
.|. ..+.||+|+||.||+|.. .+|.. ||||+++.. ....+.+.+|++++.++ +||||+++++++.+++..++
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 26 DIK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GCE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred Hcc--ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 355 678999999999999986 45664 499999753 22456788999999999 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 005177 519 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 580 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~ 580 (710)
||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 9999999999999964 367889999999999999999998 9999999999999999999
Q ss_pred eEEcccCccccccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 581 PHLAEFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+||+|||+++......... ......+.+||......++.++|||||||++|||+| |+.|+.+..... ....+
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~~~ 254 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKL 254 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHG
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HHHHh
Confidence 9999999987543221111 112334678888887788999999999999999998 988886432111 01111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........+. .....+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 255 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 255 PQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp GGTCCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1110011111 11245778999999999999999999999998763
No 166
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.4e-37 Score=318.34 Aligned_cols=243 Identities=18% Similarity=0.166 Sum_probs=191.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 678899999999999986 4799999999986421 25678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----ceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----~~kl~DfGla~~~~~~ 595 (710)
|+++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~ 165 (283)
T 3bhy_A 89 LVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165 (283)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceeccCC
Confidence 9999999999965 578999999999999999999998 999999999999999877 8999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
... ...+...+.+||......++.++||||||+++|||+||+.|+....... ....+................
T Consensus 166 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T 3bhy_A 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVNYDFDEEYFSNTS 239 (283)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTCCCCCHHHHTTCC
T ss_pred CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcccCCcchhcccCC
Confidence 111 1123445778898888888999999999999999999999986432111 001111000000000011123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||+.|+++.
T Consensus 240 ~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 240 ELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 457789999999999999999999873
No 167
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3e-37 Score=329.60 Aligned_cols=242 Identities=16% Similarity=0.129 Sum_probs=192.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||.++... ...+.+..|.+++..+ +||||+++++++.+.+..|
T Consensus 20 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 20 TDFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred HHcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3455 778999999999999986 468899999998642 2345678889999887 7999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999975 678999999999999999999998 9999999999999999999999999999753221
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. .....++..|.+||......++.++||||+||++|||++|+.||.+.... .....+.... ...+. ..
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~ 244 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SM 244 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TS
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CC
Confidence 1 11222455678889888888999999999999999999999998743211 1111121111 11111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPS-----MEEALK 700 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs-----~~evl~ 700 (710)
...+.+++.+|++.||++||+ ++|+.+
T Consensus 245 s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 245 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 345778999999999999995 467664
No 168
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.3e-37 Score=336.31 Aligned_cols=231 Identities=17% Similarity=0.146 Sum_probs=179.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc----chhHHHHHHHH---HHHhccCCCCceeEE-------EEEEcCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNRH 514 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~~ 514 (710)
..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+ +.+++++|||||+++ +++.+++
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 678999999999999996 67999999999743 23457788999 556677899999998 6766553
Q ss_pred c-----------------eeEEEeecCCCChhhhhhc--CC-------CHHHHHHHHHHHHHHHHHHhcCCCCCceecCC
Q 005177 515 Q-----------------AYLLYDYLPNGNLSEKIRT--KR-------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568 (710)
Q Consensus 515 ~-----------------~~lv~Ey~~~gsL~~~l~~--~~-------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 568 (710)
. .|+||||+ +|+|.+++.. .. +|..+..|+.|+++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 2 79999999 6899999975 22 2577889999999999999999 9999999
Q ss_pred CCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhhhcc-----------CCccccceeeHHHHHHHHHhCC
Q 005177 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-----------KEEMYMDVYGFGEIILEILTNG 637 (710)
Q Consensus 569 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~-----------~~~~~~DVySfGvvl~Elltg~ 637 (710)
||+|||++.++.+||+|||+++.......... + ..|.+||+.... .++.++|||||||++|||+||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~-g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSV-S-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCC-C-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCC-C-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999986443222222 3 557888888776 7899999999999999999999
Q ss_pred CCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 638 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 638 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.|+.+...... ...+.... ... ...+.+++.+||+.||++|||+.|+++
T Consensus 311 ~Pf~~~~~~~~------~~~~~~~~-----~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 311 LPITKDAALGG------SEWIFRSC-----KNI---PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp CCC------CC------SGGGGSSC-----CCC---CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCcccccccc------hhhhhhhc-----cCC---CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99874332211 11111110 111 245678899999999999999999986
No 169
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=325.57 Aligned_cols=245 Identities=16% Similarity=0.217 Sum_probs=186.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcE----EEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~----vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+. ||+|.+... ....+.+.+|++++++++|||||+++++|.+++ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 778999999999999984 45554 577777543 234677899999999999999999999998754 7899999
Q ss_pred cCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 523 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 523 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~ 174 (327)
T 3lzb_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence 999999999965 468899999999999999999998 99999999999999999999999999998654322111
Q ss_pred ----cccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 600 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 600 ----~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
..+...|.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+.. ..
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~ 245 (327)
T 3lzb_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------ISSILEKGERLPQPPI---CT 245 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCCCCTT---BC
T ss_pred cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCCcc---CC
Confidence 112334778888888889999999999999999999 888886432211 0000101100111111 22
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
..+.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 356788999999999999999999999988753
No 170
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3e-37 Score=331.89 Aligned_cols=239 Identities=15% Similarity=0.111 Sum_probs=182.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHH-HhccCCCCceeEEEEEEcCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
++|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|..+ ++.++|||||++++++.+.+..|
T Consensus 38 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 38 SDFH--FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGEE--EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hheE--EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3455 778999999999999986 5688999999986432 23445566665 57789999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999975 567888899999999999999998 9999999999999999999999999999864322
Q ss_pred C--CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
. .....++..|.+||+.....++.++|||||||++|||++|+.||.+.... .....+.... ...+...
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~~~~~--- 262 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILNKP-LQLKPNI--- 262 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHHHHHSC-CCCCSSS---
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcc-cCCCCCC---
Confidence 1 11222455688889988888999999999999999999999998643211 1111121111 1111111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEE 697 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~e 697 (710)
...+.+++.+|++.||++||++.+
T Consensus 263 ~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 263 TNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CHHHHHHHHHHcccCHHhCCCCCC
Confidence 245678889999999999999854
No 171
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-37 Score=334.40 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=183.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccC-CCCceeEEEEEEcCC--
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH-- 514 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~-- 514 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++.+++ |||||++++++..++
T Consensus 7 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 7 VLRKYE--LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHTTEE--EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred ccCceE--EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 455566 788999999999999985 68999999999643 234566778999999997 999999999998654
Q ss_pred ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
..|+|||||+ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 6899999998 699998875 578889999999999999999998 99999999999999999999999999997642
Q ss_pred ccC-----------------------CCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc
Q 005177 594 LAD-----------------------GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 649 (710)
Q Consensus 594 ~~~-----------------------~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~ 649 (710)
... .....++.+|.+||+..+ ..++.++||||+||++|||+||+.||.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 110 001124566888888765 57899999999999999999999998754321110
Q ss_pred ccc-ccc--------cccccc---------------cccCCCcchH-------------HHHHHHHHHHhhcCCCCCCCC
Q 005177 650 PID-GLL--------GEMYNE---------------NEVGSSSSLQ-------------DEIKLVLDVALLCTRSTPSDR 692 (710)
Q Consensus 650 ~~~-~~~--------~~~~~~---------------~~~~~~~~~~-------------~~~~~~~~l~~~Cl~~~p~~R 692 (710)
... ... ..+..+ .......... .....+.+++.+||+.||++|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 000 000 000000 0000000000 112467899999999999999
Q ss_pred CCHHHHHHH
Q 005177 693 PSMEEALKL 701 (710)
Q Consensus 693 Ps~~evl~~ 701 (710)
||++|++++
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999876
No 172
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.2e-37 Score=329.42 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=193.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------hHHHHHHHHHHHhcc-CCCCceeEEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTV-RHKNLIRLLGFC 510 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l-~H~niv~l~g~~ 510 (710)
..+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|+.++.++ +||||+++++++
T Consensus 92 ~~~~y~--~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 92 FYQKYD--PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhcc--cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344566 678999999999999997 5799999999975421 145678899999999 799999999999
Q ss_pred EcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 588 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl 588 (710)
...+..++||||+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCc
Confidence 999999999999999999999975 578999999999999999999998 999999999999999999999999999
Q ss_pred cccccccCC-CCcccccccCchhhhhc------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc
Q 005177 589 KYLTQLADG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 661 (710)
Q Consensus 589 a~~~~~~~~-~~~~~~~~~~~~e~~~~------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 661 (710)
++....... ....++..|.+||+..+ ..++.++|||||||++|||+||+.||....... ....+...
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------~~~~i~~~ 320 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------MLRMIMEG 320 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHT
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhC
Confidence 876543221 11224445778887653 257889999999999999999999986432111 01111111
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+......+.+++.+|++.||++|||+.|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1000011111223457789999999999999999999863
No 173
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.5e-37 Score=330.02 Aligned_cols=240 Identities=21% Similarity=0.263 Sum_probs=189.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++|
T Consensus 55 ~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 55 LFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hee--eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 355 678899999999999984 789999999997532 2246788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 520 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
|||++ |++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 99998 688888743 578999999999999999999999 99999999999999999999999999997654322
Q ss_pred CCCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccc-cccCCCcchHH
Q 005177 597 GSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE-NEVGSSSSLQD 672 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 672 (710)
. ..++..|.+||... ...++.++|||||||++|||+||+.|+........ ...+... .+.......
T Consensus 209 -~-~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~-- 278 (348)
T 1u5q_A 209 -S-FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPALQSGHW-- 278 (348)
T ss_dssp -C-CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCCCTTS--
T ss_pred -c-ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHhcCCCCCCCCCC--
Confidence 1 22345577888764 45688899999999999999999999864332110 0011100 000011111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+||+.||++|||++|+++.
T Consensus 279 -~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 279 -SEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred -CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2346688899999999999999999864
No 174
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=9.1e-37 Score=317.32 Aligned_cols=243 Identities=19% Similarity=0.197 Sum_probs=187.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~E 521 (710)
....||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||+++++++.. +...++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 556899999999999985 678899999998642 345678899999999999999999999875 346899999
Q ss_pred ecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. ..++..+..++.|+++||+|||+.. ++|+||||||+||+++ .++.+||+|||++.........
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred ecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence 9999999999975 6789999999999999999999981 1399999999999998 7899999999998754432211
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...+.+||... ..++.++||||+||++|||+||+.|+.......... ..+.... .. ..........+.
T Consensus 189 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-----~~~~~~~-~~-~~~~~~~~~~l~ 260 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY-----RRVTSGV-KP-ASFDKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH-----HHHTTTC-CC-GGGGGCCCHHHH
T ss_pred cccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH-----HHHhccC-Cc-cccCCCCCHHHH
Confidence 122344577788765 458899999999999999999999987533221100 0110000 00 000011124577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+||+.||++|||+.|++++
T Consensus 261 ~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhhC
Confidence 89999999999999999999863
No 175
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.4e-36 Score=319.46 Aligned_cols=245 Identities=19% Similarity=0.250 Sum_probs=183.1
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----cee
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAY 517 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 517 (710)
..+.||+|+||.||+|... ++..||||.++... ...+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 6778999999999999752 45689999997542 23567889999999999999999999998755 359
Q ss_pred EEEeecCCCChhhhhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 518 LLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
+||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999832 468999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccccccccc
Q 005177 590 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 590 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
+....... ....+...+.+||......++.++|||||||++|||+| |+.|+....... ....+......
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCCC
Confidence 76532211 11112334677888888888999999999999999999 667765432211 01111111101
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+ ......+.+++.+||+.||++|||+.|++++|+++.
T Consensus 269 ~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 269 KQP---EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp CCB---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC---ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 112245778999999999999999999999998763
No 176
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-36 Score=330.09 Aligned_cols=239 Identities=16% Similarity=0.141 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccC--CCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++...+|+.||||++.... ...+.+.+|++++.+++ |||||++++++..++..++||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 778999999999999998889999999997542 23567899999999997 5999999999999999999999 56
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC----C
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----S 598 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~----~ 598 (710)
+|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++....... .
T Consensus 139 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence 7899999975 567888999999999999999998 999999999999996 58999999999986543221 1
Q ss_pred CcccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc-CC
Q 005177 599 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 666 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 666 (710)
...++.+|.+||+... ..++.++|||||||++|||++|+.||....... ..+..+.++... ..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIEF 289 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HHHHHHHCTTSCCCC
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HHHHHHhCccccCCC
Confidence 1224556788887754 368889999999999999999999986432211 011122222111 01
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+... ...+.+++.+||+.||++|||+.|+++.
T Consensus 290 ~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 290 PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 2356788999999999999999999864
No 177
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-37 Score=322.53 Aligned_cols=249 Identities=20% Similarity=0.238 Sum_probs=189.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 678899999999999986 5699999999875432 256688999999999999999999999999999999999999
Q ss_pred CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--Ccc
Q 005177 526 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 601 (710)
Q Consensus 526 gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~--~~~ 601 (710)
++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 163 (311)
T 4agu_A 87 TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163 (311)
T ss_dssp EHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred chHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCc
Confidence 999998864 578999999999999999999998 9999999999999999999999999999765422211 112
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-ccccc-------------ccccccccCC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG-------------EMYNENEVGS 666 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~ 666 (710)
+..++.+||...+ ..++.++||||+||++|||+||+.|+.+......... ..... ..........
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 4agu_A 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243 (311)
T ss_dssp --GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC
T ss_pred CCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCC
Confidence 4455778887765 5678999999999999999999999874432110000 00000 0000000000
Q ss_pred C---cc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 S---SS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~---~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+ .. .......+.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00 01223457889999999999999999999864
No 178
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=324.32 Aligned_cols=239 Identities=16% Similarity=0.146 Sum_probs=185.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCC--CCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||++...+++.||||++.... ...+.+.+|++++.+++| ||||++++++.+++..++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 778999999999999999899999999997542 235678899999999987 999999999999999999999 56
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC----
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 598 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~---- 598 (710)
+|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 92 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence 7899999975 568899999999999999999998 999999999999997 578999999999865432211
Q ss_pred CcccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc-CC
Q 005177 599 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 666 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 666 (710)
...++.+|.+||+... ..++.++|||||||++|||+||+.||........ ......++... ..
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~ 242 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHAIIDPNHEIEF 242 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHCTTSCCCC
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-----HHHHHhcCCcccCC
Confidence 1224556778888754 5678899999999999999999999864322100 11111111101 11
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+... ...+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 243 PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccC---CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 1356788999999999999999999864
No 179
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=336.86 Aligned_cols=246 Identities=14% Similarity=0.077 Sum_probs=191.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
++|. ..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++.+++|||||++++++.+++..|+
T Consensus 61 ~~f~--~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 61 DDFE--ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp GGEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred hhEE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4466 778999999999999986 679999999997532 224457889999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 519 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 9999999999999965 578899999999999999999998 9999999999999999999999999999765432
Q ss_pred CC---CCcccccccCchhhhh-------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc-cc
Q 005177 596 DG---SFPAKIAWTESGEFYN-------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EV 664 (710)
Q Consensus 596 ~~---~~~~~~~~~~~~e~~~-------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 664 (710)
.. ....++..|.+||+.. ...++.++|||||||++|||+||+.||.+..... ....+.... ..
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~ 289 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHYKEHL 289 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHC
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCc
Confidence 21 1123455677888776 3467889999999999999999999987543211 011111100 00
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCC---CCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDR---PSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~R---Ps~~evl~~ 701 (710)
..+.........+.+++.+|+. +|++| |+++|+.++
T Consensus 290 ~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0011011123467789999999 99998 689998764
No 180
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.9e-37 Score=323.26 Aligned_cols=249 Identities=21% Similarity=0.222 Sum_probs=194.1
Q ss_pred cCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeeccch--hHHHHHHHHHHHhcc-CCCCceeEEEEEEcCC-
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH- 514 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~- 514 (710)
.|. ..+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++.++ +||||+++++++...+
T Consensus 28 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 28 RLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hee--eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 355 778999999999999973 4678999999986432 356788999999999 6999999999998754
Q ss_pred ceeEEEeecCCCChhhhhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec
Q 005177 515 QAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 576 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~ 576 (710)
..++||||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence 589999999999999999752 57888999999999999999998 999999999999999
Q ss_pred CCCceEEcccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccc
Q 005177 577 ENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPI 651 (710)
Q Consensus 577 ~~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~ 651 (710)
.++.+||+|||+++........ ...+...+.+||......++.++|||||||++|||+| |+.|+.+...... ..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-HH
Confidence 9999999999999765322211 1112334778898888889999999999999999999 8888764322111 00
Q ss_pred cccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 652 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
..+........+.. ....+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 262 ----~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 262 ----RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ----HHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HHhccCccCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00101000110111 1245778889999999999999999999998763
No 181
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.5e-36 Score=329.63 Aligned_cols=249 Identities=17% Similarity=0.157 Sum_probs=189.9
Q ss_pred hhhhhcCC--CCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g--~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+| +||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..++|||||
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 77899999 9999999986 579999999998643 23567888999999999999999999999999999999999
Q ss_pred CCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC---
Q 005177 524 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 596 (710)
Q Consensus 524 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 596 (710)
++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||.+.......
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~ 185 (389)
T 3gni_B 109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185 (389)
T ss_dssp TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEEC
T ss_pred CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccccccc
Confidence 99999999864 468899999999999999999998 99999999999999999999999999875432110
Q ss_pred ------CCCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc--cccccccccccc---
Q 005177 597 ------GSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNENE--- 663 (710)
Q Consensus 597 ------~~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~--~~~~~~~~~~~~--- 663 (710)
.....++..|.+||.... ..++.++|||||||++|||+||+.||.+......... ........+...
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
T 3gni_B 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265 (389)
T ss_dssp SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------
T ss_pred cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccc
Confidence 011123344677887765 5788999999999999999999999875332211000 000000000000
Q ss_pred -------------------------------cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 664 -------------------------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 664 -------------------------------~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+........+.+++.+||+.||++|||+.|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000111223467889999999999999999999865
No 182
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=8.7e-37 Score=317.69 Aligned_cols=243 Identities=16% Similarity=0.187 Sum_probs=189.3
Q ss_pred hhh-hhcCCCCCccEEEEc---CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECE-EAARPQSAAGCKAVL---PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~-~ig~g~~g~vy~~~~---~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+ .||+|+||.||+|.. .+++.||||.++... ...+.+.+|++++++++||||+++++++ +.+..++||||
T Consensus 20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 444 899999999999953 457899999997642 2356789999999999999999999999 56778999999
Q ss_pred cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 523 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 523 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 999999999975 478899999999999999999999 9999999999999999999999999998765422111
Q ss_pred ---CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.......+.+||......++.++|||||||++|||+| |+.|+.+..... ....+........+. ...
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~ 246 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCPA---GCP 246 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---TCC
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCCCCCCCC---CCC
Confidence 0112233677888877788899999999999999999 988886432211 000110110011111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
..+.+++.+||+.||++||++.|+++.|+++
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4577899999999999999999999999875
No 183
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-36 Score=326.00 Aligned_cols=253 Identities=20% Similarity=0.229 Sum_probs=189.2
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH---- 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 514 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhhee--EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 34455 778999999999999985 67999999999753 223567889999999999999999999998754
Q ss_pred --ceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 --QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 --~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..++||||++ |+|.+.+....++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 102 FQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp CCEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ccceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 6899999998 589999988889999999999999999999998 9999999999999999999999999999865
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-ccc--------c------
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL--------G------ 656 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~~--------~------ 656 (710)
...... ...++..|.+||......++.++||||+||++|||+||+.||.+......+... ... .
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 432111 112445578889888888999999999999999999999998754321110000 000 0
Q ss_pred ----------------ccccccccCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 ----------------EMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ----------------~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.......+. ..........+.+++.+|++.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000 00112235678899999999999999999999874
No 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.4e-36 Score=339.46 Aligned_cols=249 Identities=16% Similarity=0.174 Sum_probs=195.9
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++|||||++++++.+.+..
T Consensus 19 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 96 (486)
T 3mwu_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (486)
T ss_dssp HHHHHEE--EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ChhcceE--EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEE
Confidence 3445566 788999999999999986 589999999997532 2356788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~---~~~~~kl~DfGla~~ 591 (710)
++||||+++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999999998854 678899999999999999999998 999999999999995 456799999999986
Q ss_pred ccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 592 TQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 592 ~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
...... ....++++|.+||+... .++.++||||+||++|||++|+.||.+..... ....+.........+.+
T Consensus 174 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~ 246 (486)
T 3mwu_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (486)
T ss_dssp BCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCSCSGGG
T ss_pred CCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCCccc
Confidence 543221 12224566788888765 58899999999999999999999986433211 11111111101111222
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+++.+|++.||++|||+.|++++
T Consensus 247 ~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2334567789999999999999999999874
No 185
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=328.06 Aligned_cols=251 Identities=12% Similarity=0.035 Sum_probs=187.8
Q ss_pred cCCchhhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccch------------hHHHHHHHHHHHhccCCCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLG 508 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~g 508 (710)
.|. ..+.||+|+||.||+|... ++..||||++..... ..+.+.+|+..+..++||||+++++
T Consensus 38 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 38 QWV--LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp EEE--EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred eEE--EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 355 7789999999999999864 678999999986421 1234667888899999999999999
Q ss_pred EEEc----CCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC--c
Q 005177 509 FCYN----RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM--E 580 (710)
Q Consensus 509 ~~~~----~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~--~ 580 (710)
++.. .+..++||||+ +|+|.+++.. .+++.++..|+.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 9988 67899999999 9999999975 578999999999999999999998 999999999999999887 9
Q ss_pred eEEcccCccccccccCC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc
Q 005177 581 PHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 651 (710)
Q Consensus 581 ~kl~DfGla~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~ 651 (710)
+||+|||+++....... ....+...|.+||...+..++.++|||||||++|||+||+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 99999999976532211 111234457788988888899999999999999999999999864221111000
Q ss_pred cccccccccccccCCCcchH------HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 652 DGLLGEMYNENEVGSSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.......... +.... .....+.+++.+||+.||++||+++|+++.|+.+.
T Consensus 272 -~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 272 -TAKTNLLDEL----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp -HHHHHHHHTT----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred -HHHHhhcccc----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 0000000000 00000 12246778999999999999999999999998765
No 186
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.5e-37 Score=345.76 Aligned_cols=246 Identities=14% Similarity=0.102 Sum_probs=194.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++|||||++++++.+++..|+|
T Consensus 185 ~f~--~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 185 TFR--QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 355 678899999999999986 689999999997642 2345678899999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 520 YDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
|||+++|+|.+++.. ..++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999865 278999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 596 DG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 596 ~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ....++..|.+||+.....++.++|||||||++|||+||+.||........ .......+.... ...+. ...
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~~~~-~~~p~---~~s 413 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKEVP-EEYSE---RFS 413 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHHHCC-CCCCT---TSC
T ss_pred ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhhccc-ccCCc---cCC
Confidence 21 112245567888988888889999999999999999999999975432110 000111111111 11111 123
Q ss_pred HHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRP-----SMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RP-----s~~evl~~ 701 (710)
..+.+++.+|++.||++|| +++|++++
T Consensus 414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 4677899999999999999 78888753
No 187
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-36 Score=315.90 Aligned_cols=241 Identities=15% Similarity=0.191 Sum_probs=193.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .++..||||.+..... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 15 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 15 DFD--IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hce--eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 355 678899999999999986 5788999999975422 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999999865 578899999999999999999998 999999999999999999999999999865543222
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++||||||+++|||++|+.|+....... ....+.... ...+.. ....+
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~---~~~~~ 239 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNVD-LKFPPF---LSDGS 239 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCTT---SCHHH
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhccc-cCCCCc---CCHHH
Confidence 22224455778898888888999999999999999999999986432111 011111111 111111 12456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+++.+|++.||++|||+.|+++
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhhcCHhhCCCHHHHhh
Confidence 78899999999999999999986
No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-36 Score=340.44 Aligned_cols=247 Identities=17% Similarity=0.207 Sum_probs=190.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
+.+.|. ..+.||+|+||.||+|.. .+|..||||.+.... .....+.+|++++++++|||||+++++|.+++..+
T Consensus 35 ~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 112 (494)
T 3lij_A 35 LSEMYQ--RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112 (494)
T ss_dssp HHHHEE--EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hhcCeE--EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344566 778999999999999986 578999999998642 23567889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~~ 592 (710)
+|||||++|+|.+.+.. ..++.....|+.|+++||+|||+. +|+||||||+|||++.. +.+||+|||+++..
T Consensus 113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999999998864 578899999999999999999998 99999999999999764 55999999999865
Q ss_pred cccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
..... ....++.+|.+||+.. ..++.++||||+||++|||++|+.||.+..... ....+.........+.+.
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 262 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVEKGKYTFDSPEWK 262 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCSGGGT
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCchhcc
Confidence 43221 1222455678888765 468899999999999999999999987433211 111111111011112222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.....+.+++.+|++.||++|||+.|+++
T Consensus 263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 263 NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 23456778999999999999999999885
No 189
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.3e-37 Score=321.21 Aligned_cols=253 Identities=13% Similarity=0.068 Sum_probs=190.8
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++..++..+
T Consensus 33 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 33 FGPYR--LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp -CCEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eccEE--EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34455 778999999999999985 5789999999975422 2467889999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
+||||+++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999975 578999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC---CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 596 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 596 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
... ...+...+.+||......++.++|||||||++|||+||+.|+....... ...........+... . ..
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~--~---~~ 260 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV--MGAHINQAIPRPSTV--R---PG 260 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH--HHHHHHSCCCCGGGT--S---TT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH--HHHHhccCCCCcccc--C---CC
Confidence 111 1123445778888877788999999999999999999999987432110 000000000000000 0 11
Q ss_pred HHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHhccCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 707 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RP-s~~evl~~L~~~~~ 707 (710)
....+.+++.+||+.||++|| +++++++.|+.+-+
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 123566888999999999999 99999999987643
No 190
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.8e-37 Score=321.71 Aligned_cols=249 Identities=18% Similarity=0.186 Sum_probs=193.2
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.+.|. ..+.||+|+||.||++.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFI--FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccce--eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 334565 778999999999999986 5799999999986432 356688999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCccccccc
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~ 594 (710)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999999864 568899999999999999999998 99999999999999 7889999999999876442
Q ss_pred cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 595 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.......+...+.+||......++.++||||+||++|||+||+.|+....... ....+.........+......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~ 235 (304)
T 2jam_A 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK------LFEKIKEGYYEFESPFWDDIS 235 (304)
T ss_dssp BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHCCCCCCTTTTTTSC
T ss_pred CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCccccccCC
Confidence 21111123455778898888888999999999999999999999986432110 011111110000011111223
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 236 ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 467789999999999999999999863
No 191
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.1e-37 Score=323.00 Aligned_cols=251 Identities=18% Similarity=0.274 Sum_probs=193.1
Q ss_pred hhhhhcCCCCCccEEEE-----cCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCC--ceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~E 521 (710)
..+.||+|+||.||++. ..+|+.||||++.... ...+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 67889999999999998 3578999999997643 34567899999999999999999999987654 7899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 597 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~- 597 (710)
|+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~ 201 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201 (326)
T ss_dssp CCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence 9999999999975 368999999999999999999998 999999999999999999999999999986543211
Q ss_pred ----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCC---------CCCccccccccccccccc-c
Q 005177 598 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS---------SLQNKPIDGLLGEMYNEN-E 663 (710)
Q Consensus 598 ----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~---------~~~~~~~~~~~~~~~~~~-~ 663 (710)
....+...+.+||......++.++|||||||++|||+||+.|+.... ..........+.+..... .
T Consensus 202 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 11112334677888877788899999999999999999998875210 000000000000111110 0
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+. .....+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 282 ~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 282 LPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp CCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 12345778999999999999999999999998875
No 192
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8e-37 Score=324.34 Aligned_cols=246 Identities=16% Similarity=0.193 Sum_probs=192.7
Q ss_pred hhhhhcCCCCCccEEEEc-CC-----CcEEEEEEeeccc--hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVL-PT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~-----g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+ +..||||.+.... ...+.+.+|+++++++ +|||||+++++|.+++..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 678899999999999985 22 3489999998643 2456788999999999 8999999999999999999999
Q ss_pred eecCCCChhhhhhc----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEc
Q 005177 521 DYLPNGNLSEKIRT----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 584 (710)
Q Consensus 521 Ey~~~gsL~~~l~~----------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~ 584 (710)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEEC
Confidence 99999999999864 257888999999999999999998 99999999999999999999999
Q ss_pred ccCccccccccCCC----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccc
Q 005177 585 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 659 (710)
Q Consensus 585 DfGla~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 659 (710)
|||+++........ ...+...|.+||......++.++|||||||++|||+| |..|+.+...... .........
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~~~~~~ 284 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--FYKLVKDGY 284 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--HHHHHHHTC
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--HHHHHhcCC
Confidence 99999865332211 1112334778888888889999999999999999999 7777764322110 000000100
Q ss_pred cccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 660 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ..+.. ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 285 ~~---~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 285 QM---AQPAF---APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp CC---CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC---CCCCC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 00 00111 1245678999999999999999999999998763
No 193
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.9e-37 Score=328.58 Aligned_cols=191 Identities=16% Similarity=0.199 Sum_probs=165.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|..||+|.+... ....+.+.+|++++++++|||||++++++.+++..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 778999999999999986 57999999999864 233567899999999999999999999999999999999999999
Q ss_pred Chhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCccccc
Q 005177 527 NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 604 (710)
Q Consensus 527 sL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 604 (710)
+|.+++.. ..++.....++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++...........+..
T Consensus 117 ~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~ 194 (360)
T 3eqc_A 117 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194 (360)
T ss_dssp BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCC
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCC
Confidence 99999975 5788999999999999999999832 7999999999999999999999999998754332222223445
Q ss_pred ccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCC
Q 005177 605 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 642 (710)
Q Consensus 605 ~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~ 642 (710)
.|.+||......++.++|||||||++|||+||+.||..
T Consensus 195 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp TTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred CeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 57888988888899999999999999999999999874
No 194
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=321.07 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=190.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 778999999999999985 789999999987543 346778899999999999999999999973 34789999999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
++|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999999864 468999999999999999999999 999999999999999999999999998765421110
Q ss_pred C-----------CcccccccCchhhhhcc---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccc
Q 005177 598 S-----------FPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 663 (710)
Q Consensus 598 ~-----------~~~~~~~~~~~e~~~~~---~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 663 (710)
. ...+...|.+||..... .++.++|||||||++|||++|+.|+............ .... ...
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~---~~~ 265 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-AVQN---QLS 265 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH-HHHC---C--
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH-Hhhc---cCC
Confidence 0 00123446777876543 3678999999999999999999998521100000000 0000 000
Q ss_pred cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 664 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 664 ~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
..... .....+.+++.+||+.||++|||+.|+++.|+.+++.
T Consensus 266 ~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 266 IPQSP---RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp CCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCccc---cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 11011 1224577899999999999999999999999998753
No 195
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.5e-36 Score=311.40 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=192.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 7 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 7 EDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceE--EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 4455 678899999999999986 579999999997543 23577889999999999999999999999999999999
Q ss_pred eecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC--
Q 005177 521 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~-- 596 (710)
||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999999975 578899999999999999999998 99999999999999999999999999987643211
Q ss_pred --CCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 597 --GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 597 --~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
.....+...+.+||......+ +.++|||||||++|||+||+.|+........ .. ....... .. .......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~----~~~~~~~-~~-~~~~~~~ 234 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EY----SDWKEKK-TY-LNPWKKI 234 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HH----HHHHTTC-TT-STTGGGS
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HH----HHhhhcc-cc-cCchhhc
Confidence 111123344677887766554 7789999999999999999999874332111 00 0010000 00 0111122
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 3456789999999999999999999864
No 196
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-36 Score=341.70 Aligned_cols=248 Identities=17% Similarity=0.201 Sum_probs=192.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--------------hhHHHHHHHHHHHhccCCCCceeE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNLIRL 506 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--------------~~~~~~~~e~~~l~~l~H~niv~l 506 (710)
+.+.|. ..+.||+|+||.||+|.. .+|..||||.+.... ...+.+.+|++++++++|||||++
T Consensus 34 i~~~Y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 34 IGESYF--KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp GGGTEE--EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceE--EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 445566 788999999999999986 578899999997632 124678899999999999999999
Q ss_pred EEEEEcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---ce
Q 005177 507 LGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EP 581 (710)
Q Consensus 507 ~g~~~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~---~~ 581 (710)
+++|.+++..++|||||++|+|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .+
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999998864 678999999999999999999998 999999999999999775 69
Q ss_pred EEcccCccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 582 HLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 582 kl~DfGla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
||+|||+++....... ....++++|.+||... ..++.++||||+||++|||++|+.||.+..... ....+..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~ 261 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------IIKKVEK 261 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 9999999986543221 1222455678888766 468899999999999999999999987433211 1111111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.......+.+......+.+++.+|++.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11000011112233567889999999999999999999863
No 197
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.4e-36 Score=319.04 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=186.0
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++
T Consensus 33 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 33 IDRYR--RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp GGGEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhEE--EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 44566 788999999999999984 6899999999975432 24567789999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-----CCCceEEcccCcccc
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-----ENMEPHLAEFGFKYL 591 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-----~~~~~kl~DfGla~~ 591 (710)
||||++ |+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 599999875 578889999999999999999998 999999999999994 455699999999976
Q ss_pred ccccCCC--CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccc
Q 005177 592 TQLADGS--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDG 653 (710)
Q Consensus 592 ~~~~~~~--~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~ 653 (710)
....... ...+...|.+||..... .++.++|||||||++|||+||+.|+........ |....
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5422111 11234557788887654 479999999999999999999999874332110 00000
Q ss_pred cccccccccccCCCcchHH-----HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 LLGEMYNENEVGSSSSLQD-----EIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.........+......... ....+.+++.+|++.||++|||+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000000000000111111 12467799999999999999999999873
No 198
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-36 Score=321.41 Aligned_cols=249 Identities=15% Similarity=0.177 Sum_probs=190.3
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc------CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~------~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .+|..||||.+... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 30 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 30 KNIT--LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGCE--EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hheE--EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 3455 778999999999999984 45779999999753 2345678899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhhhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEE
Q 005177 516 AYLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHL 583 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl 583 (710)
.++||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999975 267889999999999999999998 9999999999999994 446999
Q ss_pred cccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccccccccc
Q 005177 584 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 584 ~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
+|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.|+...... . ....+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-----~~~~~ 258 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-E-----VLEFV 258 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-H-----HHHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-H-----HHHHH
Confidence 99999875432211 11112344778888888889999999999999999999 77777543211 0 01111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........+. .....+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 259 ~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 259 TSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1111011111 11245678899999999999999999999998764
No 199
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.2e-37 Score=317.89 Aligned_cols=253 Identities=10% Similarity=0.041 Sum_probs=191.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEE-EcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++.+++|++++..++++ .+++..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp --CE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CceE--EeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 4455 778999999999999985 789999999876533 234578899999999999888877766 55677899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~~ 595 (710)
|+ +|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 8999999863 578999999999999999999999 99999999999999 78899999999999865432
Q ss_pred CC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 596 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 596 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
.. ....+...+.+||......++.++|||||||++|||+||+.||........... ...+........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh---hhhhhcccccch
Confidence 21 111234457788988888899999999999999999999999975332211100 011100000000
Q ss_pred Cc-chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 SS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~~-~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
.. ........+.+++.+|++.||++|||++|+++.|+++.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 00 00111246778999999999999999999999998763
No 200
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-36 Score=336.90 Aligned_cols=187 Identities=17% Similarity=0.257 Sum_probs=148.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----C
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 514 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++... +
T Consensus 53 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYE--IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEE--ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeE--EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3455 778999999999999985 57999999999753 23456788999999999999999999999543 5
Q ss_pred ceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+. |+|.+++.. .+++.....++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 6899999985 799999876 468899999999999999999998 9999999999999999999999999999865
Q ss_pred cccCC-----------------------------CCcccccccCchhhh-hccCCccccceeeHHHHHHHHHhC
Q 005177 593 QLADG-----------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTN 636 (710)
Q Consensus 593 ~~~~~-----------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg 636 (710)
..... ....++.+|.+||+. ....++.++|||||||++|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110 001135668888965 456789999999999999999994
No 201
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-36 Score=340.34 Aligned_cols=242 Identities=13% Similarity=0.105 Sum_probs=192.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..|+||||++
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~ 268 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN 268 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence 667899999999999986 5799999999976432 24568889999999999999999999999999999999999
Q ss_pred CCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 525 NGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 525 ~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|+|.+++.. ..++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 9999999864 367888999999999999999998 9999999999999999999999999999865432221
Q ss_pred --CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 --FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 --~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
...++..|.+||+..+..++.++|||||||++|||+||+.||........ .......+.... ...+. .....
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~~~-~~~p~---~~s~~ 419 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLEQA-VTYPD---KFSPA 419 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHHCC-CCCCT---TSCHH
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhhcc-cCCCc---ccCHH
Confidence 11345668889998888899999999999999999999999975432111 011111111111 11111 12345
Q ss_pred HHHHHhhcCCCCCCCCCCH-----HHHHH
Q 005177 677 VLDVALLCTRSTPSDRPSM-----EEALK 700 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~-----~evl~ 700 (710)
+.+++.+|++.||++||++ +|+.+
T Consensus 420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 6788899999999999975 56653
No 202
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=325.25 Aligned_cols=237 Identities=10% Similarity=0.049 Sum_probs=185.4
Q ss_pred hhhhhcCCCCCccEEEE------cCCCcEEEEEEeeccchhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|. ..+++.||||+++... ...+..|++++.+++ |+||+++++++..++..++||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 67889999999999994 4678999999997543 445667777777766 999999999999999999999
Q ss_pred eecCCCChhhhhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-----------CCceE
Q 005177 521 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----------NMEPH 582 (710)
Q Consensus 521 Ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-----------~~~~k 582 (710)
|||++|+|.+++.. .++|..+..|+.|+++||+|||+. +|+||||||+|||++. ++.+|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999962 578999999999999999999998 9999999999999998 89999
Q ss_pred EcccCccccccccCC----CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccc
Q 005177 583 LAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 658 (710)
Q Consensus 583 l~DfGla~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 658 (710)
|+|||+++....... ....++.+|.+||+..+..++.++|||||||++|||+||+.|+...... .+.. ...
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~----~~~ 298 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-ECKP----EGL 298 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-EEEE----CSC
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-ceee----chh
Confidence 999999975432111 1122455688889988888999999999999999999999998633211 1110 111
Q ss_pred ccccccCCCcchHHHHHHHHHHHhhcCCCCCCCC-CCHHHHHHHHhcc
Q 005177 659 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR-PSMEEALKLLSGL 705 (710)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~R-Ps~~evl~~L~~~ 705 (710)
... .. .. ....+++..|++.+|.+| |+++++.+.|+++
T Consensus 299 ~~~-----~~-~~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 299 FRR-----LP-HL---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp CTT-----CS-SH---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-----cC-cH---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 111 11 12 234466778999999999 5788877777654
No 203
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.6e-37 Score=342.13 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=195.4
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCcee
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 517 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 517 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..+
T Consensus 25 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 25 SDRYK--GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp HHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cCceE--EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34465 778999999999999986 589999999997532 23677899999999999999999999999999999
Q ss_pred EEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCccccc
Q 005177 518 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLT 592 (710)
Q Consensus 518 lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~ 592 (710)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999999865 568889999999999999999999 99999999999999 46789999999999765
Q ss_pred cccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 593 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 593 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
...... ...++++|.+||...+ .++.++||||+||++|||++|+.||.+..... ....+.........+.+.
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 252 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGKYTFELPQWK 252 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGGG
T ss_pred ccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCCcccc
Confidence 432111 1124556788888765 68899999999999999999999987433211 111111111011112222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 253 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 253 KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 334567789999999999999999999863
No 204
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.7e-36 Score=321.26 Aligned_cols=246 Identities=14% Similarity=0.145 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEc--CCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--RHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||.++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||||+++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 778999999999999984 78999999999743 3567889999999998 9999999999988 5678999999999
Q ss_pred CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-ceEEcccCccccccccCC-CCcccc
Q 005177 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-SFPAKI 603 (710)
Q Consensus 526 gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~-~~~~~~ 603 (710)
++|.+++. ..++.....++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++....... ....+.
T Consensus 118 ~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 193 (330)
T 3nsz_A 118 TDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 193 (330)
T ss_dssp CCHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSC
T ss_pred hhHHHHHH-hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccccc
Confidence 99999986 488889999999999999999998 999999999999999776 899999999986543222 122244
Q ss_pred cccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc--c-----cccccccc--------------
Q 005177 604 AWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--G-----LLGEMYNE-------------- 661 (710)
Q Consensus 604 ~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~--~-----~~~~~~~~-------------- 661 (710)
.++.+||.... ..++.++||||+||++|||+||+.|+..+......... . ...+..+.
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 273 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHC
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhh
Confidence 45777887665 66889999999999999999999998644321110000 0 00000000
Q ss_pred -----cc--cCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 -----NE--VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 -----~~--~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+ .............+.+++.+|++.||++|||++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 274 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00000011123567899999999999999999999874
No 205
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-36 Score=321.96 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=188.5
Q ss_pred hhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 452 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
+.||+|+||.||+|.. .+|+.||||.++.... ....+.+|++++.+++ ||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 7899999999999985 5799999999986432 3567889999999885 699999999999999999999999999
Q ss_pred Chhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCccccccccCCC-
Q 005177 527 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 527 sL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~~- 598 (710)
+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++........
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 191 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence 99999854 468999999999999999999998 9999999999999998 789999999999865432211
Q ss_pred CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHH
Q 005177 599 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 678 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (710)
...+...|.+||......++.++|||||||++|||+||+.|+........ . ..+..................+.
T Consensus 192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~----~~i~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--Y----LNISQVNVDYSEETFSSVSQLAT 265 (327)
T ss_dssp --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--H----HHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--H----HHHHhcccccCchhhcccCHHHH
Confidence 12244557888988888899999999999999999999999864332110 0 00000000000111112234577
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 005177 679 DVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 679 ~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+++.+|++.||++|||++|+++.
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhCC
Confidence 89999999999999999999864
No 206
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.7e-37 Score=317.83 Aligned_cols=253 Identities=10% Similarity=0.039 Sum_probs=193.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEE-EcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++++++|++++..++++ .+++..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cEEE--EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 3455 778999999999999985 789999999987543 345688999999999999888777766 45667899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~~ 595 (710)
|+ +|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 8999999863 578999999999999999999999 99999999999999 47899999999999865432
Q ss_pred CC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 596 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 596 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
.. ....+...|.+||......++.++|||||||++|||+||+.|+........... ...+........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh---hhhhcccccCCc
Confidence 21 111244457788988888899999999999999999999999875332111000 011100000000
Q ss_pred C-cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 667 S-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 667 ~-~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
. .........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 0 000111245778999999999999999999999998763
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=313.33 Aligned_cols=242 Identities=16% Similarity=0.162 Sum_probs=185.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
...+||+|+||.||+|.. .++..||||.+.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++|+
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 445899999999999985 678999999998643 235678899999999999999999999999999999999999999
Q ss_pred hhhhhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCceEEcccCccccccccCC--CC
Q 005177 528 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADG--SF 599 (710)
Q Consensus 528 L~~~l~~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~--~~ 599 (710)
|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999752 35788889999999999999998 9999999999999997 89999999999876542211 11
Q ss_pred cccccccCchhhhhcc--CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~--~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
..+...+.+||..... .++.++|||||||++|||+||+.|+............. ...... ...+. .....+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~-~~~~~---~~~~~~ 255 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVH-PEIPE---SMSAEA 255 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHHCCC-CCCCT---TSCHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---cccccc-ccccc---cCCHHH
Confidence 1234446777876553 37889999999999999999999986432211000000 000000 00011 122456
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 788999999999999999999863
No 208
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=331.35 Aligned_cols=252 Identities=14% Similarity=0.081 Sum_probs=191.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC---------CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCcee---------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP---------TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR--------- 505 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~--------- 505 (710)
+.|. ..+.||+|+||.||+|... +++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~--~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWK--LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEE--EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEE--EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3455 7789999999999999864 4889999999854 46788999999999999998
Q ss_pred ------EEEEEEc-CCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 005177 506 ------LLGFCYN-RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIV 574 (710)
Q Consensus 506 ------l~g~~~~-~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiL 574 (710)
+++++.. ++..++||||+ +|+|.+++.. .+++..+..|+.|+++||+|||+. +|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6788876 67889999999 9999999975 478999999999999999999999 9999999999999
Q ss_pred ecCCC--ceEEcccCccccccccCC---------CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 575 FDENM--EPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 575 l~~~~--~~kl~DfGla~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
++.++ .+||+|||+++....... ....+...|.+||......++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 899999999976543211 1112344577889888888999999999999999999999998754
Q ss_pred CCCCccccccccccccccc-cc-CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 644 SSLQNKPIDGLLGEMYNEN-EV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
......... ......... .. ............+.+++.+||+.||++|||++|+++.|+++.
T Consensus 272 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 272 LPNTEDIMK-QKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TTCHHHHHH-HHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CcCHHHHHH-HHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 311111100 000000000 00 000000011245778899999999999999999999998763
No 209
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-37 Score=329.42 Aligned_cols=248 Identities=15% Similarity=0.105 Sum_probs=190.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc----CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 513 (710)
+.|. ..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++.++ .||||+++++++.++
T Consensus 54 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 54 ENFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp GGEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cceE--EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 3455 778999999999999986 478999999997532 2345677889999999 599999999999999
Q ss_pred CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+..++||||+++|+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999975 578889999999999999999998 999999999999999999999999999976
Q ss_pred ccccCC---CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 592 TQLADG---SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 592 ~~~~~~---~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
...... ....++..|.+||+... ..++.++|||||||++|||+||+.|+........ .......+.... ...
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~-~~~ 285 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE-PPY 285 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC-CCC
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC-CCC
Confidence 432111 11123455778888764 3478899999999999999999999874332111 001111111111 111
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHHH
Q 005177 667 SSSLQDEIKLVLDVALLCTRSTPSDRP-----SMEEALKLL 702 (710)
Q Consensus 667 ~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----s~~evl~~L 702 (710)
+. +....+.+++.+||+.||++|| +++|+++..
T Consensus 286 ~~---~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 286 PQ---EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred Cc---ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11 1224567899999999999999 999998753
No 210
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.8e-36 Score=315.82 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=193.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 15 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 15 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cceE--EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3455 778999999999999986 568899999997542 245678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++++|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999998865 578999999999999999999998 99999999999999999999999999987654221
Q ss_pred CC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ...+...+.+||......++.++||||||+++|||+||+.|+........ ...+.... ...+.. ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~~---~~ 239 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLRIKKNE-YSIPKH---IN 239 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTTC-CCCCTT---SC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhhcc-CCCccc---cC
Confidence 11 12234457788888887889999999999999999999999864321110 01111111 111111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+|++.||++|||++|+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 356688899999999999999999864
No 211
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=349.29 Aligned_cols=318 Identities=21% Similarity=0.222 Sum_probs=285.7
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCC-ChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~L~~L~~L~L~~N 159 (710)
+.++++++. +|. + .+.|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 10 dcs~~~L~~-vP~-l----p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 10 FYRFCNLTQ-VPQ-V----LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EESCCCSSC-CCS-S----CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EccCCCCCC-CCC-C----CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 334455553 343 2 568999999999999999999999999999999999777666 788999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcc--cCCCCCCCeEEecCCcCCCCCc-cccccccccccccccccccccc
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
.+++..|..|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..++++++|++|++++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877765 9999999999999999988765 5799999999999999999999
Q ss_pred CCccccCC--CccchhccccccCCccCchhccCCCC------CcEEEccccccCCCCCccccC-----------------
Q 005177 237 IPWQLGNM--SEVQYLDIAGANLSGSIPKELSNLTK------LESLFLFRNQLAGQVPWEFSR----------------- 291 (710)
Q Consensus 237 ~p~~l~~l--~~L~~L~ls~n~l~g~~p~~l~~l~~------L~~L~L~~n~l~~~~p~~~~~----------------- 291 (710)
.|..+..+ ++|+.|++++|.+.+..|..+..+++ |+.|++++|.+++..|..+..
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99988887 89999999999999998887777665 999999999988776654432
Q ss_pred ---------------------CCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccC
Q 005177 292 ---------------------VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWN 350 (710)
Q Consensus 292 ---------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 350 (710)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..+..+++|++|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 26799999999999998999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccc
Q 005177 351 NYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 351 N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
|.+++..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++.
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i 377 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI 377 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc
Confidence 999988899999999999999999999887777888999999999999998863
No 212
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-36 Score=326.07 Aligned_cols=251 Identities=21% Similarity=0.276 Sum_probs=185.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcCC-----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 514 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 514 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEE--EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4455 778999999999999985 67999999999653 223567889999999999999999999998753
Q ss_pred -ceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
..|+||||+ +++|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 7899999875 578889999999999999999998 9999999999999999999999999999875
Q ss_pred cccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccc-----
Q 005177 593 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGE----- 657 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~----- 657 (710)
...... ..++.+|.+||.... ..++.++||||+||++|||++|+.||.+......... ......
T Consensus 179 ~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 179 DSEMTG-YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CSSCCS-SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ccccCc-CcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 433222 224556788887765 6789999999999999999999999875432110000 000000
Q ss_pred ---ccc---cc-ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ---MYN---EN-EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ---~~~---~~-~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
... .. ..............+.+++.+|++.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 00 000000011223567889999999999999999999874
No 213
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=323.80 Aligned_cols=248 Identities=17% Similarity=0.233 Sum_probs=183.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchh--HHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||+++..... ...+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 678899999999999986 57999999999754322 2245578999999999999999999999999999999998 5
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC--cc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF--PA 601 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--~~ 601 (710)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... ..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 161 (324)
T 3mtl_A 85 DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161 (324)
T ss_dssp EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccccc
Confidence 99988865 468889999999999999999998 99999999999999999999999999987654222111 12
Q ss_pred cccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccccccc------cccC
Q 005177 602 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGEMYNE------NEVG 665 (710)
Q Consensus 602 ~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~~~~~------~~~~ 665 (710)
+..+|.+||...+ ..++.++||||+||++|||+||+.||.+......... .......... ....
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (324)
T 3mtl_A 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241 (324)
T ss_dssp -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence 3455778887665 5678999999999999999999999874321110000 0000000000 0000
Q ss_pred -CCcc----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 -SSSS----LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 -~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.... .......+.+++.+|++.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 01123457799999999999999999999873
No 214
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.3e-37 Score=316.50 Aligned_cols=248 Identities=17% Similarity=0.184 Sum_probs=189.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||++.. .+|+.||+|.+.... ...+.+.+|++++++++||||+++++++.+ ++..++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 678899999999999986 579999999998642 345678899999999999999999998864 56889999999
Q ss_pred CCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 524 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 524 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+.. ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 99999999964 2789999999999999999999981 012999999999999999999999999998765422
Q ss_pred CCC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHH
Q 005177 596 DGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 673 (710)
Q Consensus 596 ~~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (710)
... ...+...+.+||......++.++|||||||++|||+||+.|+....... ....+........+. ..
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~---~~ 240 (279)
T 2w5a_A 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFRRIPY---RY 240 (279)
T ss_dssp CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCCT---TS
T ss_pred cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH------HHHHHhhcccccCCc---cc
Confidence 110 0113344778888888788999999999999999999999986432110 011111111001111 12
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 674 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 674 ~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
...+.+++.+||+.||++|||+.|+++.+....
T Consensus 241 ~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 241 SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 245678899999999999999999998875544
No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.4e-37 Score=319.75 Aligned_cols=250 Identities=19% Similarity=0.251 Sum_probs=174.7
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++.+++++||||+++++++..++..++|||
T Consensus 16 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 16 DYE--LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCE--EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhh--hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 355 778999999999999985 578999999987542 235678889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 522 YLPNGNLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 522 y~~~gsL~~~l~~----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
|+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 368999999999999999999998 999999999999999999999999999875
Q ss_pred ccccCC-------CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc--cccccccccc
Q 005177 592 TQLADG-------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNE 661 (710)
Q Consensus 592 ~~~~~~-------~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~--~~~~~~~~~~ 661 (710)
...... ....+...+.+||.... ..++.++|||||||++|||+||+.|+........... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 249 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET- 249 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc-
Confidence 432110 11113344677887654 5678899999999999999999999874332111000 000000000
Q ss_pred cccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 662 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
. .............+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 G-VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 00000001112456788999999999999999999863
No 216
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-36 Score=332.88 Aligned_cols=189 Identities=20% Similarity=0.184 Sum_probs=163.3
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc------CCCCceeEEEEEEcCCceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV------RHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++..+ .|+||+++++++...+..++||||
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 788999999999999975 5689999999987655566778888888776 577999999999999999999999
Q ss_pred cCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--eEEcccCccccccccC
Q 005177 523 LPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLAD 596 (710)
Q Consensus 523 ~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~~~~~~ 596 (710)
+. |+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 181 ~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~ 256 (429)
T 3kvw_A 181 LS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV 256 (429)
T ss_dssp CC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCC
T ss_pred cC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecCCcc
Confidence 96 699998865 378999999999999999999998 9999999999999999887 9999999997654322
Q ss_pred CCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 597 GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
.. ..++.+|.+||+.....++.++|||||||++|||+||+.||.+.
T Consensus 257 ~~-~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 257 YT-YIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CS-SCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc-cCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 22 22445578889988888999999999999999999999988643
No 217
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4e-36 Score=314.56 Aligned_cols=240 Identities=19% Similarity=0.233 Sum_probs=192.8
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 678899999999999985 679999999997642 34677899999999999999999999999999999999999999
Q ss_pred Chhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CCcccc
Q 005177 527 NLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKI 603 (710)
Q Consensus 527 sL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~~~~~ 603 (710)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....+.
T Consensus 106 ~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 182 (303)
T 3a7i_A 106 SALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 182 (303)
T ss_dssp EHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSC
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCC
Confidence 99999975 578999999999999999999998 999999999999999999999999999876543221 112234
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhh
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 683 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 683 (710)
..+.+||......++.++|||||||++|||+||+.|+....... ....+........... ....+.+++.+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~l~~li~~ 253 (303)
T 3a7i_A 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEGN---YSKPLKEFVEA 253 (303)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCSS---CCHHHHHHHHH
T ss_pred cCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH------HHHHhhcCCCCCCccc---cCHHHHHHHHH
Confidence 45778898888888999999999999999999999986432111 0000000000000111 12356788999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 005177 684 CTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 684 Cl~~~p~~RPs~~evl~~ 701 (710)
||+.||++|||+.|+++.
T Consensus 254 ~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HCCSSGGGSCCHHHHTTC
T ss_pred HcCCChhhCcCHHHHhhC
Confidence 999999999999999864
No 218
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-36 Score=323.08 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=189.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 25 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYE--NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEE--EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhe--eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3455 778999999999999986 5699999999875422 356678999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|||+++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999999888753 678999999999999999999999 999999999999999999999999999876532211
Q ss_pred C--CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc------------------cccc
Q 005177 598 S--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------------GLLG 656 (710)
Q Consensus 598 ~--~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~------------------~~~~ 656 (710)
. ...+..++.+||..... .++.++||||+||++|||+||+.||............ ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 1 12244557788877654 6788999999999999999999998754321100000 0000
Q ss_pred ccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 657 EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 657 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+. ....... ......+.+++.+|++.||++|||+.|+++
T Consensus 260 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPE-IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCC-CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCcc-ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 0000000 122356789999999999999999999875
No 219
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.1e-36 Score=312.37 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=186.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++.. ......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 11 TEFH--ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred chhh--hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4455 778999999999999986 58999999999863 23456778889999888 89999999999999999999
Q ss_pred EEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---------------
Q 005177 519 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------------- 577 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~--------------- 577 (710)
||||+++|+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999964 368999999999999999999998 9999999999999984
Q ss_pred ----CCceEEcccCccccccccCCCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc
Q 005177 578 ----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 652 (710)
Q Consensus 578 ----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~ 652 (710)
...+||+|||.++...... ...+...+.+||..... .++.++|||||||++|||++|+.++.......
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----- 238 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH----- 238 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-----
T ss_pred ccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-----
Confidence 4479999999987654322 12233446677776654 56789999999999999999887654322110
Q ss_pred ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 653 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+........+.. ....+.+++.+||+.||++|||+.|++++
T Consensus 239 ----~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 239 ----EIRQGRLPRIPQV---LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----HHHTTCCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----HHHcCCCCCCCcc---cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111110000111 12456788999999999999999999864
No 220
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.1e-35 Score=336.36 Aligned_cols=327 Identities=21% Similarity=0.243 Sum_probs=232.8
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.+||+++.+++..+..+.. +++|++|||++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~--l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CCCEEEeeCCCCCCCCHHHHhC--CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 4788999999998766667777 89999999999999887777899999999999999999987778899999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCcccccccccccc----ccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH----MEIGY 230 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~----L~l~~ 230 (710)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|++++|++++..|..+..+.++.. ++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999998777789999999999999999875 46888899999999999999887766655443322211 11111
Q ss_pred ccc-----------------------------------------------------------------------------
Q 005177 231 NFY----------------------------------------------------------------------------- 233 (710)
Q Consensus 231 n~~----------------------------------------------------------------------------- 233 (710)
|.+
T Consensus 211 n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 211 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred CcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 100
Q ss_pred --------------------------------------------------cccC-------------------CccccCC
Q 005177 234 --------------------------------------------------QGNI-------------------PWQLGNM 244 (710)
Q Consensus 234 --------------------------------------------------~g~~-------------------p~~l~~l 244 (710)
.+.. +.....+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred hcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 0000 0001123
Q ss_pred CccchhccccccCCc--cCc------------------------------------------------hhccCCCCCcEE
Q 005177 245 SEVQYLDIAGANLSG--SIP------------------------------------------------KELSNLTKLESL 274 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g--~~p------------------------------------------------~~l~~l~~L~~L 274 (710)
++|+.|++++|.+.. ..+ ..+..+++++.+
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 344445554444321 000 112333444555
Q ss_pred EccccccCCCCCccccCCCCCCEEEccCCCC-CCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCC
Q 005177 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL-SGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (710)
Q Consensus 275 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l 353 (710)
+++.|.+.+..|..+..+++|+.|++++|.+ .+.+|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 5555555555555566666777777777764 334667777778888888888888877777788888888888888888
Q ss_pred CCCCCcccCCCCCCcEEECCCCcCCccCcccccCC-CceeeEecccCCcccc
Q 005177 354 SGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNNFTGI 404 (710)
Q Consensus 354 ~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~-~~L~~l~l~~N~l~g~ 404 (710)
++..|..+..+++|++||+++|++++..|..+..+ ++|+.|++++|.++..
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 87777777778888888888888887777777666 5788888888887754
No 221
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.6e-36 Score=314.99 Aligned_cols=248 Identities=21% Similarity=0.233 Sum_probs=192.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----------hhHHHHHHHHHHHhccC-CCCceeEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----------TRIKIVSEFITRIGTVR-HKNLIRLLGF 509 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----------~~~~~~~~e~~~l~~l~-H~niv~l~g~ 509 (710)
..+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++.+++ ||||++++++
T Consensus 15 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 15 FYENYE--PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp CTTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhccc--eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 344565 778999999999999986 578999999997532 12456788999999996 9999999999
Q ss_pred EEcCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 510 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 510 ~~~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
+.+++..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999999975 578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC-CCcccccccCchhhhh------ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccc
Q 005177 588 FKYLTQLADG-SFPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 660 (710)
Q Consensus 588 la~~~~~~~~-~~~~~~~~~~~~e~~~------~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 660 (710)
+++....... ....+...+.+||... ...++.++|||||||++|||++|+.|+....... ....+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~ 243 (298)
T 1phk_A 170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMS 243 (298)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhc
Confidence 9876543211 1112344467777764 3457889999999999999999999986432111 0011111
Q ss_pred ccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 661 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.......+........+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1101111111223356778999999999999999999986
No 222
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.9e-36 Score=321.90 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=194.0
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeE
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 518 (710)
+.|. ..+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 41 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 41 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3455 778999999999999986 568899999997542 345678899999999999999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++++|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999998864 578999999999999999999998 99999999999999999999999999987654221
Q ss_pred CC--CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 GS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~~--~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
.. ...+...|.+||......++.++|||||||++|||+||+.|+........ ...+.... ...+.. ..
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~---~~ 265 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLRIKKNE-YSIPKH---IN 265 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHHTC-CCCCTT---SC
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHhcCC-CCCCcc---CC
Confidence 11 12234457788988888889999999999999999999999864321110 00111111 011111 12
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.+++.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 346688899999999999999999863
No 223
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.9e-36 Score=310.94 Aligned_cols=239 Identities=14% Similarity=0.184 Sum_probs=185.9
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 524 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 524 (710)
..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++.+++++||||+++++++.+++..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 678899999999999986 4799999999975422 24578899999999999999999999999999999999999
Q ss_pred CCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-CCcc
Q 005177 525 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 601 (710)
Q Consensus 525 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~ 601 (710)
+++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 171 (276)
T 2h6d_A 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171 (276)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcceeccc
Confidence 9999999965 578899999999999999999998 999999999999999999999999999876543211 1112
Q ss_pred cccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHH
Q 005177 602 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 680 (710)
Q Consensus 602 ~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 680 (710)
+...+.+||....... +.++||||||+++|||++|+.|+....... ....+.... ...+.. ....+.++
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~---~~~~l~~l 241 (276)
T 2h6d_A 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIRGGV-FYIPEY---LNRSVATL 241 (276)
T ss_dssp -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-CCCCTT---SCHHHHHH
T ss_pred CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------HHHHhhcCc-ccCchh---cCHHHHHH
Confidence 3444677787766544 688999999999999999999986432110 011111111 011111 12356788
Q ss_pred HhhcCCCCCCCCCCHHHHHHH
Q 005177 681 ALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 681 ~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+.+|++.||++|||+.|++++
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999874
No 224
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=315.60 Aligned_cols=244 Identities=16% Similarity=0.216 Sum_probs=188.9
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 522 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 29 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 29 EVFD--VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp -CEE--EEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhh--hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 3355 778899999999999986 569999999998643 356688999999999999999999999999999999999
Q ss_pred cCCCChhhhhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--
Q 005177 523 LPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 597 (710)
Q Consensus 523 ~~~gsL~~~l~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-- 597 (710)
+++|+|.+++. ...++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence 99999999986 2578999999999999999999998 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHH
Q 005177 598 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 677 (710)
Q Consensus 598 ~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (710)
....+...+.+||......++.++|||||||++|||++|+.|+.......... .......+. . .........+
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~-~---~~~~~~~~~l 255 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF---MIPTNPPPT-F---RKPELWSDNF 255 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHSCCCC-C---SSGGGSCHHH
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhcCCCcc-c---CCcccCCHHH
Confidence 11223445778898888788999999999999999999999986432111000 000000000 0 0111123457
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHH
Q 005177 678 LDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 678 ~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.+++.+|++.||++|||+.|+++
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhhCcCHHHHHh
Confidence 78999999999999999999976
No 225
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.1e-36 Score=317.97 Aligned_cols=282 Identities=22% Similarity=0.267 Sum_probs=205.6
Q ss_pred CCChhhHHHHHHHHhhC-CCCCCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcC
Q 005177 22 SANDPYSEALLSLKSEL-VDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFF 100 (710)
Q Consensus 22 ~~~~~~~~all~~k~~~-~~~~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l 100 (710)
++..+|++||++||+++ .|+.+.+.+|.... ....++|.|.|+.|+.. +..+.....
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~----~~~~~~~~~~g~~~~~~------------------~~~l~~~~~ 80 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN----SNNPQIETRTGRALKAT------------------ADLLEDATQ 80 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT----TTCTTSCCSHHHHHHHH------------------HHHHHHHTS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc----cccccccccCCcchhhh------------------HHHHhcccc
Confidence 45567999999999999 67777788894110 01457899999999631 011111125
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 67889999999987 78888888999999999999998 78888899999999999999988 78888999999999999
Q ss_pred cCCCCCCCCCcccCC---------CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhc
Q 005177 181 AGSYFSGPIPSQFGS---------FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
++|++.+.+|..+.. +++|++|++++|.++ .+|..++++++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------~lp~~l~~l~~L~~L~ 212 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-------------------------SLPASIANLQNLKSLK 212 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-------------------------CCCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-------------------------cchHhhcCCCCCCEEE
Confidence 998888888887654 555555555555544 4444455555666666
Q ss_pred cccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc
Q 005177 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 331 (710)
+++|++++ +|..+..+++|++|++++|++.+.+|..+..+++|++|++++|++.+.+|..+..+++|+.|+|++|++.+
T Consensus 213 L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 213 IRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp EESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 66666663 44456666777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCcccCCCCCCcEEeccCCCCC
Q 005177 332 TVPESLVQLPSLEILFIWNNYFS 354 (710)
Q Consensus 332 ~~p~~~~~l~~L~~L~L~~N~l~ 354 (710)
.+|..+..+++|+.+++..|.+.
T Consensus 292 ~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 292 RLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCGGGGGSCTTCEEECCGGGSC
T ss_pred hccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777777666554
No 226
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.7e-36 Score=320.40 Aligned_cols=252 Identities=17% Similarity=0.143 Sum_probs=191.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchh------------------HHHHHHHHHHHhccCCCCcee
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR------------------IKIVSEFITRIGTVRHKNLIR 505 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~------------------~~~~~~e~~~l~~l~H~niv~ 505 (710)
+.|. ..+.||+|+||.||+|.. +|+.||||.+...... .+.+.+|++++++++||||++
T Consensus 31 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 31 NDYR--IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp TTEE--EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred CceE--EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 3455 778999999999999998 9999999999864221 178999999999999999999
Q ss_pred EEEEEEcCCceeEEEeecCCCChhhh------hhc----CCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeE
Q 005177 506 LLGFCYNRHQAYLLYDYLPNGNLSEK------IRT----KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIV 574 (710)
Q Consensus 506 l~g~~~~~~~~~lv~Ey~~~gsL~~~------l~~----~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiL 574 (710)
+++++.+.+..++||||+++|+|.++ +.. ..++..+..++.|++.||+|||+ . +|+||||||+||+
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 99999999999999999999999998 543 46899999999999999999998 7 9999999999999
Q ss_pred ecCCCceEEcccCccccccccCCCCcccccccCchhhhhcc-CCcc-ccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-
Q 005177 575 FDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEM-YMDVYGFGEIILEILTNGRLTNAGSSLQNKPI- 651 (710)
Q Consensus 575 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~-~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~- 651 (710)
++.++.+||+|||+++...........+...+.+||..... .++. ++|||||||++|||+||+.|+...........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 264 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred EcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 99999999999999876533222222234457778877665 5555 89999999999999999999875432111000
Q ss_pred --ccccc------ccccccccC-CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 652 --DGLLG------EMYNENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 652 --~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ....+.... ...........+.+++.+||+.||++|||+.|++++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 000000000 000001123467789999999999999999999863
No 227
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=318.48 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=177.7
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccC-CCCceeEEEEEEc--------CCceeE
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--------RHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--------~~~~~l 518 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++.+++ |||||++++++.. ....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 778999999999999985 689999999986543 34567889999999996 9999999999952 335799
Q ss_pred EEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 519 LYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
||||+. |+|.+++.. .+++..+..|+.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 999996 799998854 478999999999999999999998 6 99999999999999999999999999976
Q ss_pred ccccCCC--------------CcccccccCchhhh---hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccc
Q 005177 592 TQLADGS--------------FPAKIAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL 654 (710)
Q Consensus 592 ~~~~~~~--------------~~~~~~~~~~~e~~---~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 654 (710)
....... ...+...|.+||.. ....++.++|||||||++|||+||+.|+........
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------ 261 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI------ 261 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh------
Confidence 5422110 11134446778876 455678899999999999999999999874332110
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 655 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
........ . ... ....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 262 ~~~~~~~~-~--~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 262 VNGKYSIP-P--HDT---QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ----CCCC-T--TCC---SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCcccCC-c--ccc---cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00110000 0 000 1123567888999999999999999999998764
No 228
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.8e-36 Score=320.10 Aligned_cols=248 Identities=16% Similarity=0.133 Sum_probs=186.3
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCY 511 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 511 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++||||+++++++.
T Consensus 8 l~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 8 LRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhcee--EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 344566 778999999999999985 6789999999975321 1345788999999999999999999997
Q ss_pred cCCceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEccc
Q 005177 512 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEF 586 (710)
Q Consensus 512 ~~~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~Df 586 (710)
.++ .++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred CCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 655 8999999999999998865 568889999999999999999998 9999999999999987654 999999
Q ss_pred CccccccccCCC-CcccccccCchhhhh---ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc
Q 005177 587 GFKYLTQLADGS-FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 587 Gla~~~~~~~~~-~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
|+++........ ...+...|.+||... ...++.++|||||||++|||+||+.|+......... ...+....
T Consensus 162 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~ 236 (322)
T 2ycf_A 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----KDQITSGK 236 (322)
T ss_dssp TTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH-----HHHHHHTC
T ss_pred ccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH-----HHHHHhCc
Confidence 998765321100 011344577888753 456788999999999999999999998743321110 00111111
Q ss_pred ccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 663 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+....+....+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000111122356788999999999999999999985
No 229
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.1e-36 Score=316.29 Aligned_cols=246 Identities=17% Similarity=0.198 Sum_probs=187.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|..||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 19 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 19 EVWE--IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GTEE--EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccee--ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3455 778899999999999986 568999999997543 235678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc--C
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 596 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~--~ 596 (710)
|+++|+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999998853 578999999999999999999998 9999999999999999999999999987543211 1
Q ss_pred CCCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 597 GSFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
.....+...+.+||... ...++.++|||||||++|||+||+.|+....... ......... ........
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~ 246 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSD-PPTLLTPS 246 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCSSGG
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccC-CcccCCcc
Confidence 11112344467778763 4567889999999999999999999986432110 000111000 00000111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+.+++.+|++.||++|||+.|++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 123457788999999999999999999763
No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2e-36 Score=314.60 Aligned_cols=247 Identities=19% Similarity=0.239 Sum_probs=184.9
Q ss_pred hhhhhcCCCCCccEEEEc--CCCc--EEEEEEeecc----chhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEe
Q 005177 450 ECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~--~~g~--~vAvK~l~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 521 (710)
..+.||+|+||.||+|.. .+++ .||||.++.. ....+.+.+|++++++++||||+++++++.+++ .++|||
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 778899999999999984 3333 6999999753 234567889999999999999999999998755 899999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
|+++|+|.+++.. ..++..+.+++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 177 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177 (291)
T ss_dssp CCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred cccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence 9999999999964 478999999999999999999998 9999999999999999999999999998765432211
Q ss_pred -----CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHH
Q 005177 599 -----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 672 (710)
Q Consensus 599 -----~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (710)
...+...+.+||......++.++|||||||++|||+| |+.|+....... ....+...... .+....
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~--~~~~~~ 249 (291)
T 1u46_A 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKEGER--LPRPED 249 (291)
T ss_dssp EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTSCCC--CCCCTT
T ss_pred hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH------HHHHHHccCCC--CCCCcC
Confidence 1112334778888887788899999999999999999 888886432111 01111111000 000111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
....+.+++.+|++.||++|||+.|+++.|+++.+.
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 234577899999999999999999999999988753
No 231
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-36 Score=319.43 Aligned_cols=252 Identities=22% Similarity=0.241 Sum_probs=187.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..
T Consensus 10 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 10 KRYE--KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp ---C--EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred cccE--EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4466 778999999999999996 5699999999975322 134678899999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
++||||+++ +|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999985 89888865 367888999999999999999999 99999999999999999999999999998654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------cccccccc
Q 005177 594 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 655 (710)
Q Consensus 594 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 655 (710)
..... ...++.+|.+||...+ ..++.++|||||||++|||++|..|+.+..... .|......
T Consensus 164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccC
Confidence 32211 1224555778887754 457889999999999999999988876432111 01000000
Q ss_pred cccccccccCCCc---chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 GEMYNENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+..........+ ........+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000000000 001123567899999999999999999999875
No 232
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-34 Score=332.45 Aligned_cols=305 Identities=19% Similarity=0.180 Sum_probs=239.6
Q ss_pred EEEcCCCCCcccCCcc-hhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECC
Q 005177 79 GINLSMKGLSGALPGK-PLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (710)
Q Consensus 79 ~l~l~~~~l~g~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~ 157 (710)
.++++++.+.+ +|+. +.. +++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 55 ~l~l~~~~l~~-lp~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 55 IVTFKNSTMRK-LPAALLDS--FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp EEEESSCEESE-ECTHHHHH--CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred EEEeeCCCCCC-cCHHHHcc--CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 34445544433 4443 344 7788888888888887777778888888888888888887777777888888888888
Q ss_pred CCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC
Q 005177 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~ 237 (710)
+|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++. .++.+++|+.|++++|.+++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-- 206 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-- 206 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE--
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc--
Confidence 8888865555567888888888888888877777788888888888888887764 24566777888888877664
Q ss_pred CccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 238 p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
+...++|+.|++++|.++...+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.++
T Consensus 207 ---l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 278 (597)
T 3oja_B 207 ---LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 278 (597)
T ss_dssp ---EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred ---ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCcc
Confidence 34456788888888888743322 2 3689999999999987 36788899999999999999998899999999
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~ 397 (710)
+|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++. | +..++.|+.|+++
T Consensus 279 ~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~ 353 (597)
T 3oja_B 279 RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLS 353 (597)
T ss_dssp SCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECC
T ss_pred CCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEee
Confidence 99999999999986 5777788999999999999998 6788888889999999999999854 3 5667889999999
Q ss_pred cCCcccc
Q 005177 398 SNNFTGI 404 (710)
Q Consensus 398 ~N~l~g~ 404 (710)
+|.+++.
T Consensus 354 ~N~~~~~ 360 (597)
T 3oja_B 354 HNDWDCN 360 (597)
T ss_dssp SSCEEHH
T ss_pred CCCCCCh
Confidence 9999875
No 233
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.1e-36 Score=332.67 Aligned_cols=193 Identities=18% Similarity=0.206 Sum_probs=160.7
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----- 513 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 513 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 25 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYI--IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 34555 788999999999999985 67899999999753 23456788999999999999999999999876
Q ss_pred CceeEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+..|+||||+. |+|.+++.. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 57899999997 699999986 478999999999999999999999 999999999999999999999999999986
Q ss_pred ccccCC------------------------CCcccccccCchhhh-hccCCccccceeeHHHHHHHHHhCCCCCC
Q 005177 592 TQLADG------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 592 ~~~~~~------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
...... ....++.+|.+||.. ....++.++||||+||++|||+||..|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 542211 111245678888875 55668999999999999999998655543
No 234
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.5e-36 Score=312.67 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=175.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.++...++.++||||+++++++.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 778999999999999985 6899999999976422 23445556666888999999999999999999999999998
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC-
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 598 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 598 (710)
|+|.+++.. ..++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 588887753 5789999999999999999999842 8999999999999999999999999998765432211
Q ss_pred CcccccccCchhhh----hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ~~~~~~~~~~~e~~----~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
...+...+.+||.. ....++.++||||+||++|||+||+.|+........ ...+.......... .....
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 240 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-----QLKQVVEEPSPQLP--ADKFS 240 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-----HHHHHHHSCCCCCC--TTTSC
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-----HHHHHhccCCCCcc--cccCC
Confidence 11244457788875 455688899999999999999999999864322110 01111111101000 01123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 241 AEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 45778999999999999999999976
No 235
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.4e-36 Score=346.89 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=193.5
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc----hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 518 (710)
+|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 342 ~f~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 342 DFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp TEE--EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ceE--EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 355 778999999999999985 678899999998632 2345677888898887 69999999999999999999
Q ss_pred EEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 519 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 519 v~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||||+++|+|.+++.. .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 9999999999999975 678999999999999999999999 99999999999999999999999999998532221
Q ss_pred C--CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 597 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 597 ~--~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++..|.+||+.....++.++|||||||++|||+||+.||.+.... .....+.... ...+. ...
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s 566 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SMS 566 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHSSC-CCCCT---TSC
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCC
Confidence 1 1222556688899998889999999999999999999999999753321 1111222221 11111 123
Q ss_pred HHHHHHHhhcCCCCCCCCCCH-----HHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSM-----EEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~-----~evl~ 700 (710)
..+.+++.+|++.||++||++ +||.+
T Consensus 567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 457789999999999999997 67654
No 236
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.6e-36 Score=326.18 Aligned_cols=252 Identities=18% Similarity=0.185 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC--------CCCceeEEEEEE---
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR--------HKNLIRLLGFCY--- 511 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~--- 511 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++++++ ||||+++++++.
T Consensus 37 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYH--VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEE--EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3455 778999999999999984 67899999999876666778889999999886 888999999998
Q ss_pred -cCCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-------
Q 005177 512 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM------- 579 (710)
Q Consensus 512 -~~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~------- 579 (710)
+....++||||+ +|++.+.+.. .+++..+..|+.|+++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 556899999999 5666666643 4789999999999999999999864 899999999999999775
Q ss_pred ------------------------------------------ceEEcccCccccccccCCCCcccccccCchhhhhccCC
Q 005177 580 ------------------------------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKE 617 (710)
Q Consensus 580 ------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 617 (710)
.+||+|||+++........ ..++..|.+||......+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~-~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE-DIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCS-CCSCGGGCCHHHHHTSCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCcc-CCCCCcccCChhhcCCCC
Confidence 7999999999866433222 224555788898888889
Q ss_pred ccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-------ccc--------------ccccccc----cc---C----
Q 005177 618 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------GLL--------------GEMYNEN----EV---G---- 665 (710)
Q Consensus 618 ~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-------~~~--------------~~~~~~~----~~---~---- 665 (710)
+.++|||||||++|||+||+.||............ ... ....... .. .
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999998743321110000 000 0000000 00 0
Q ss_pred ------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 ------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+....+.+++.+||+.||++|||+.|++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 001123455678899999999999999999999863
No 237
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1e-34 Score=329.70 Aligned_cols=174 Identities=19% Similarity=0.215 Sum_probs=150.1
Q ss_pred eeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCC
Q 005177 69 KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSL 148 (710)
Q Consensus 69 ~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L 148 (710)
.|.. ..| .+.+.++++ .+|+.+ .+.|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++
T Consensus 3 ~C~~--~~~--c~~~~~~l~-~ip~~~----~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 73 (549)
T 2z81_A 3 SCDA--SGV--CDGRSRSFT-SIPSGL----TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSL 73 (549)
T ss_dssp EECT--TSE--EECTTSCCS-SCCSCC----CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred cCCC--Cce--EECCCCccc-cccccC----CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccc
Confidence 5775 234 577887776 466654 4689999999999998889999999999999999999999999999999
Q ss_pred CCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCc-cccccccccccc
Q 005177 149 RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHM 226 (710)
Q Consensus 149 ~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L 226 (710)
++|++|||++|.+++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..+..+++|++|
T Consensus 74 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 74 GSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp TTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred ccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 999999999999998888889999999999999999987 467889999999999999999666665 689999999999
Q ss_pred ccccccccccCCccccCCCccchhc
Q 005177 227 EIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 227 ~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
++++|.+++.+|..++++++|+.|+
T Consensus 154 ~L~~n~l~~~~~~~l~~l~~L~~L~ 178 (549)
T 2z81_A 154 EIKALSLRNYQSQSLKSIRDIHHLT 178 (549)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEE
T ss_pred eccCCcccccChhhhhccccCceEe
Confidence 9999999998887776544443333
No 238
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.2e-34 Score=333.17 Aligned_cols=334 Identities=21% Similarity=0.207 Sum_probs=251.7
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..++++++.+.+..|..+.....++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 223 ~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (680)
T 1ziw_A 223 SIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN 302 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEE
T ss_pred cccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEe
Confidence 45677778888877777666652224588888888888877777888888888888888888888787777777777777
Q ss_pred CCCCCCCc-----CCch----hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC--------------------
Q 005177 156 AFSNSFSG-----SVPA----EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG-------------------- 206 (710)
Q Consensus 156 L~~N~l~~-----~~p~----~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-------------------- 206 (710)
+++|...+ .+|. .|..+++|++|++++|.+++..|..|.++++|++|++++
T Consensus 303 L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~ 382 (680)
T 1ziw_A 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSP 382 (680)
T ss_dssp CTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSC
T ss_pred ccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCc
Confidence 77665443 2332 566777777777777777776666666666666666554
Q ss_pred --------CcCCCCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCCccCchhccCCCCCcEEEcc
Q 005177 207 --------NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLF 277 (710)
Q Consensus 207 --------N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~ 277 (710)
|.+++..|..+..+++|+.|++++|.+.+.+| ..+.++++|++|++++|++++..+..+..+++|+.|+++
T Consensus 383 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~ 462 (680)
T 1ziw_A 383 LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLR 462 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECT
T ss_pred CceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhc
Confidence 45555556667777777777777777777665 567777777888888877777777777777888888888
Q ss_pred ccccC--CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC--------cccCCCCCCcEEe
Q 005177 278 RNQLA--GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP--------ESLVQLPSLEILF 347 (710)
Q Consensus 278 ~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------~~~~~l~~L~~L~ 347 (710)
+|.+. +.+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..+ ..+..+++|++|+
T Consensus 463 ~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~ 542 (680)
T 1ziw_A 463 RVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542 (680)
T ss_dssp TSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEE
T ss_pred cccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEE
Confidence 87776 5677788888889999999999888777788888999999999998876422 2367888999999
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchhHHH
Q 005177 348 IWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIA 409 (710)
Q Consensus 348 L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~~~ 409 (710)
|++|.++...+..+..+++|+.|++++|++++..+..+..+..|+.|++++|++++..+-.+
T Consensus 543 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 604 (680)
T 1ziw_A 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF 604 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHH
T ss_pred CCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHh
Confidence 99999884444568888999999999999986444456778899999999999988776443
No 239
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.8e-35 Score=307.30 Aligned_cols=247 Identities=19% Similarity=0.241 Sum_probs=186.5
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 678899999999999986 5799999999975432 24678899999999999999999999999999999999998
Q ss_pred CChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC--CC
Q 005177 526 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 599 (710)
Q Consensus 526 gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~~ 599 (710)
|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (299)
T 2r3i_A 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162 (299)
T ss_dssp EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTS
T ss_pred CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCc
Confidence 699999864 467889999999999999999998 999999999999999999999999999876532211 11
Q ss_pred cccccccCchhhhhccC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCc---------------ccccccccccccccc
Q 005177 600 PAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENE 663 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~-~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~ 663 (710)
..+...+.+||...... ++.++|||||||++|||+||+.|+.+...... |.......+. .+..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 241 (299)
T 2r3i_A 163 EVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-KPSF 241 (299)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC-CTTS
T ss_pred ccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCccc-chhh
Confidence 22344577888776554 78899999999999999999999875432110 0000000000 0000
Q ss_pred cC-CCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 664 VG-SSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 664 ~~-~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ..... ......+.+++.+|++.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00001 0122457789999999999999999999873
No 240
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.8e-36 Score=313.27 Aligned_cols=245 Identities=18% Similarity=0.267 Sum_probs=184.6
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc----------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN---------- 512 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~---------- 512 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+.......+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 6 SDFE--EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccch--hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4455 778999999999999985 689999999998766667788999999999999999999999865
Q ss_pred ---CCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEccc
Q 005177 513 ---RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586 (710)
Q Consensus 513 ---~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df 586 (710)
.+..++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeC
Confidence 3568999999999999999974 356788899999999999999999 9999999999999999999999999
Q ss_pred CccccccccC----------------CCCcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc
Q 005177 587 GFKYLTQLAD----------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK 649 (710)
Q Consensus 587 Gla~~~~~~~----------------~~~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~ 649 (710)
|+++...... .....+...+.+||..... .++.++|||||||++|||++ |+........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~- 236 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN- 236 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH-
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH-
Confidence 9987643210 0011134457778877643 68899999999999999998 4332111000
Q ss_pred cccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 650 PIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
....+..................+.+++.+|++.||++|||+.|++++
T Consensus 237 ----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 ----ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ----HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 000110000000001111223456788999999999999999999874
No 241
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.4e-36 Score=315.75 Aligned_cols=253 Identities=29% Similarity=0.401 Sum_probs=219.2
Q ss_pred CCCcEEECCCCcCcc--cCCccccCCCCCcEEECcC-CCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCE
Q 005177 101 NELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 177 (710)
.+++.|+|++|.++| .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467888888888888 7888888888888888884 8888888888888888888888888888888888888888888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCC-ccchhcccccc
Q 005177 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGAN 256 (710)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~-~L~~L~ls~n~ 256 (710)
|+|++|.+++.+|..|.++++|++|++++|.+++.+| ..+++++ +|++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p------------------------~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP------------------------DSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC------------------------GGGGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCC------------------------HHHhhhhhcCcEEECcCCe
Confidence 8888888887777777777777777777777665544 4455555 78888899999
Q ss_pred CCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcc
Q 005177 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336 (710)
Q Consensus 257 l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 336 (710)
+++.+|..+..++ |+.|++++|.+++.+|..+..+++|+.|++++|++++.+|. +..+++|++|+|++|++++.+|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 9999999999987 99999999999999999999999999999999999987776 888999999999999999999999
Q ss_pred cCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCc-CCcc
Q 005177 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN-FNGS 380 (710)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~-l~g~ 380 (710)
+..+++|++|++++|+++|.+|.. ..+++|+.+++++|. +.|.
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 999999999999999999999986 888999999999998 6653
No 242
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.1e-36 Score=319.53 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=188.5
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEc------
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN------ 512 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~------ 512 (710)
...|. ..+.||+|+||.||+|.. .+|+.||||++..... ....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEE--EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred cccee--EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 34565 778999999999999986 6899999999865422 24567889999999999999999999987
Q ss_pred --CCceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 513 --RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 513 --~~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
.+..++||||+++ ++.+.+.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999984 77777754 578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC------CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-------------
Q 005177 588 FKYLTQLADG------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ------------- 647 (710)
Q Consensus 588 la~~~~~~~~------~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~------------- 647 (710)
+++....... ....++.+|.+||...+ ..++.++|||||||++|||+||+.|+.+.....
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9976532111 11123455778887765 457899999999999999999999987432110
Q ss_pred --cccccccccccccccc--cCCCcchHHH------HHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 648 --NKPIDGLLGEMYNENE--VGSSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 648 --~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.|...... +..+... ........+. ...+.+++.+|++.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNY-ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGC-GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccc-hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000 0000000 0001111111 2357799999999999999999999864
No 243
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-36 Score=324.56 Aligned_cols=251 Identities=17% Similarity=0.240 Sum_probs=189.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce---
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--- 516 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~--- 516 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+..
T Consensus 42 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEE--EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4455 778899999999999985 679999999997632 2356788999999999999999999999887654
Q ss_pred ---eEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 517 ---YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 517 ---~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
++||||++ |+|.+.+....++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999998 699999988899999999999999999999999 99999999999999999999999999998654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc---------ccccc------
Q 005177 594 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLGE------ 657 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~---------~~~~~------ 657 (710)
....... ++.+|.+||.... ..++.++|||||||++|||+||+.||.+.......... .....
T Consensus 196 ~~~~~~~-~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 196 AEMTGYV-VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp ----CTT-CCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred cCcCCcc-cCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 3322222 3455778887765 67899999999999999999999998743311100000 00000
Q ss_pred --cccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 --MYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 --~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.............. .....+.+++.+|++.||++|||+.|+++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000001111 123567899999999999999999999875
No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.7e-36 Score=310.60 Aligned_cols=229 Identities=12% Similarity=0.049 Sum_probs=181.4
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch----hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++.+.+++|||||++++++.+++..|+|
T Consensus 32 ~y~--i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 32 RYR--LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TEE--EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEE--EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 355 778999999999999986 5699999999986422 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCC
Q 005177 520 YDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 599 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 599 (710)
|||+++|+|.+++.......+..+|+.|+++||+|||+. +|+||||||+|||++.++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~---------- 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM---------- 176 (286)
T ss_dssp EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC----------
T ss_pred EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc----------
Confidence 999999999999987666677889999999999999999 9999999999999999999999966531
Q ss_pred cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHH
Q 005177 600 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 679 (710)
Q Consensus 600 ~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (710)
..++.++|||||||++|||+||+.||.+.......... .+..............+....+.+
T Consensus 177 ---------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 238 (286)
T 3uqc_A 177 ---------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDTAGQPIEPADIDRDIPFQISA 238 (286)
T ss_dssp ---------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCTTSCBCCHHHHCTTSCHHHHH
T ss_pred ---------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHhccCCCChhhcccCCCHHHHH
Confidence 12567899999999999999999999854432211000 000011000000000112245778
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHhccCC
Q 005177 680 VALLCTRSTPSDRPSMEEALKLLSGLKP 707 (710)
Q Consensus 680 l~~~Cl~~~p~~RPs~~evl~~L~~~~~ 707 (710)
++.+||+.||++| |+.|+++.|+.+..
T Consensus 239 li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 239 VAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred HHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 9999999999999 99999999987653
No 245
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-35 Score=319.08 Aligned_cols=253 Identities=16% Similarity=0.191 Sum_probs=177.7
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc-----
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ----- 515 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----- 515 (710)
..+.|. ..+.||+|+||.||+|.. .+|..||||++.........+.+|++.+++++|||||++++++...+.
T Consensus 21 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 21 EMDRFQ--VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHTTEE--EC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 345566 788999999999999986 679999999997665555667788888999999999999999976443
Q ss_pred --eeEEEeecCCCChhhhhh----c--CCCHHHHHHHHHHHHHHHHHHh--cCCCCCceecCCCCCCeEecC-CCceEEc
Q 005177 516 --AYLLYDYLPNGNLSEKIR----T--KRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDE-NMEPHLA 584 (710)
Q Consensus 516 --~~lv~Ey~~~gsL~~~l~----~--~~~~~~~~~i~~~ia~gL~yLH--~~~~~~iiHrDlk~~NiLl~~-~~~~kl~ 584 (710)
.++||||+++ ++.+.+. . ..++.....++.|++.||.||| +. +|+||||||+|||++. ++.+||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEEC
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEe
Confidence 7899999986 5554443 2 4678888999999999999999 66 9999999999999996 8999999
Q ss_pred ccCccccccccCCC-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc---------c
Q 005177 585 EFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------G 653 (710)
Q Consensus 585 DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~---------~ 653 (710)
|||+++........ ...++.+|.+||.... ..++.++|||||||++|||+||+.||.+.......... .
T Consensus 175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T 3e3p_A 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254 (360)
T ss_dssp CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence 99999866433222 1224455778887754 44799999999999999999999998754321100000 0
Q ss_pred ccccccccc------ccCCCcchH--------HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 654 LLGEMYNEN------EVGSSSSLQ--------DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 654 ~~~~~~~~~------~~~~~~~~~--------~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ++. .......+. .....+.+++.+|++.||++|||+.|++++
T Consensus 255 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 255 VLRKL-NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHH-CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHhc-ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000 000 000000011 124578899999999999999999999874
No 246
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-36 Score=323.03 Aligned_cols=242 Identities=16% Similarity=0.206 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcC---------------
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--------------- 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------------- 513 (710)
..+.||+|+||.||+|.. .+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 778999999999999985 7899999999975432 234799999999999999999998543
Q ss_pred -----------------------CceeEEEeecCCCChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 005177 514 -----------------------HQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIP 564 (710)
Q Consensus 514 -----------------------~~~~lv~Ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~ii 564 (710)
...++||||++ |+|.+.+.. .+++.....++.|+++||+|||+. +|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---gi~ 163 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GIC 163 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEE
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---cCc
Confidence 23889999998 588877753 578899999999999999999998 999
Q ss_pred ecCCCCCCeEec-CCCceEEcccCccccccccCCC-CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCC
Q 005177 565 HGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 565 HrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
||||||+||+++ .++.+||+|||+++........ ...+..+|.+||...+. .++.++||||+||++|||++|+.||.
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 999999999998 6889999999999865432222 12244557788876654 58999999999999999999999987
Q ss_pred CCCCCCccccc-c---------------cccccccccccCCCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 642 AGSSLQNKPID-G---------------LLGEMYNENEVGSSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 642 ~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
+.......... . ...+..-+. . ....+. .....+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT-L-KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC-C-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc-c-CcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 54321110000 0 000000000 0 001111 12245789999999999999999999985
No 247
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.1e-36 Score=323.85 Aligned_cols=251 Identities=20% Similarity=0.277 Sum_probs=175.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc---chhHHHHHHHHHHHhccCCCCceeEEEEEEcC------
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 513 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 29 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEE--EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceE--EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4455 778999999999999984 78999999999753 22456788999999999999999999999764
Q ss_pred CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~ 592 (710)
...++||||+ +++|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5679999999 6899998875 578999999999999999999998 9999999999999999999999999999865
Q ss_pred cccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccccc-----
Q 005177 593 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLLGE----- 657 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~~~----- 657 (710)
...... ..++.+|.+||.... ..++.++||||+||++|||+||+.||.+......... ......
T Consensus 183 ~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 183 ADEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred cccCCC-cCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 432211 224556788887765 6788999999999999999999999875432110000 000000
Q ss_pred ---cccccccCCCcchH----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ---MYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ---~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
............+. .....+.+++.+|++.||++|||+.|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000000001111 112457899999999999999999999874
No 248
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=328.65 Aligned_cols=188 Identities=21% Similarity=0.266 Sum_probs=148.1
Q ss_pred hhhhcCCCCCccEEEEcC---CCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc--CCceeEEEeecCC
Q 005177 451 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 525 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey~~~ 525 (710)
...||+|+||.||+|... ++..||||++.... ..+.+.+|++++++++|||||++++++.. +...++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 457999999999999853 68899999997543 23467889999999999999999999964 668999999997
Q ss_pred CChhhhhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCceEEcccCccc
Q 005177 526 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 590 (710)
Q Consensus 526 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl----~~~~~~kl~DfGla~ 590 (710)
|+|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 588887752 278889999999999999999999 99999999999999 677999999999998
Q ss_pred cccccCC-----CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 591 LTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 591 ~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
....... ....++.+|.+||+... ..++.++|||||||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 6542211 11124556788887765 45899999999999999999999999743
No 249
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.5e-35 Score=307.67 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=193.4
Q ss_pred hhhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCce
Q 005177 441 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 516 (710)
Q Consensus 441 ~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 516 (710)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 19 ~~~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcce--eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3445666 788999999999999986 479999999997542 2356788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CceEEcccCcccc
Q 005177 517 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 591 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~---~~~kl~DfGla~~ 591 (710)
++||||+++++|.+.+.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999998854 678999999999999999999998 99999999999999754 4799999999876
Q ss_pred ccccCCCC-cccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 592 TQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 592 ~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
........ ..+...+.+||.... .++.++||||||+++|||+||+.|+....... ....+.........+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCCCCchhh
Confidence 54322211 123445778887654 47889999999999999999999986432111 00111111100001111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
......+.+++.+|++.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1223467789999999999999999999873
No 250
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=318.92 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=189.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 515 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEE--EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3455 778899999999999985 679999999997532 235678899999999999999999999987654
Q ss_pred --eeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccc
Q 005177 516 --AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 593 (710)
Q Consensus 516 --~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~ 593 (710)
.++||||++ |+|.+++....++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred eeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999998 699999988889999999999999999999998 99999999999999999999999999987654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc---------cccc--------
Q 005177 594 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI---------DGLL-------- 655 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~---------~~~~-------- 655 (710)
..... ..+..+|.+||.... ..++.++|||||||++|||+||+.|+.+......... ....
T Consensus 178 ~~~~~-~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 178 AEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred CCccc-cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 32221 123455778887765 6788999999999999999999999875331100000 0000
Q ss_pred ----cccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 656 ----GEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 656 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....................+.+++.+|++.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000001111223567789999999999999999999864
No 251
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-35 Score=341.79 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=190.5
Q ss_pred hhhhhcCCCCCccEEEEcC----CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 523 (710)
..+.||+|+||.||+|... .+..||||+++... ...+.+.+|+.++++++|||||+++|++. ++..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5678999999999999852 35689999987532 23567899999999999999999999985 46789999999
Q ss_pred CCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC--
Q 005177 524 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 598 (710)
Q Consensus 524 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 598 (710)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 473 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 99999999974 468999999999999999999998 9999999999999999999999999999865432111
Q ss_pred -CcccccccCchhhhhccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHH
Q 005177 599 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 676 (710)
Q Consensus 599 -~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (710)
...+...|.+||......++.++|||||||++|||++ |+.|+.+..... ....+........+. .....
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~---~~~~~ 620 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMPP---NCPPT 620 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCCCCCCT---TCCHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCCCCCCc---cccHH
Confidence 1112334778898888889999999999999999998 777876432111 111111111011111 12245
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHhccC
Q 005177 677 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 706 (710)
Q Consensus 677 ~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~ 706 (710)
+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 678999999999999999999999998763
No 252
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.6e-36 Score=321.73 Aligned_cols=254 Identities=17% Similarity=0.212 Sum_probs=185.6
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch------------hHHHHHHHHHHHhccCCCCceeEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLGF 509 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~g~ 509 (710)
+.+.|. ..+.||+|+||.||+|...+|..||||++..... ..+.+.+|++++++++|||||+++++
T Consensus 20 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 20 MQSPYT--VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp TTCSCE--EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred hccceE--EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 345566 7889999999999999988899999999965321 13678999999999999999999999
Q ss_pred EEcC-----CceeEEEeecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCce
Q 005177 510 CYNR-----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 581 (710)
Q Consensus 510 ~~~~-----~~~~lv~Ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~ 581 (710)
+... ...++||||++ |+|.+.+.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 173 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDI 173 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCE
Confidence 8643 35799999998 688888865 468999999999999999999999 99999999999999999999
Q ss_pred EEcccCccccccccCCC-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cc----
Q 005177 582 HLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL---- 654 (710)
Q Consensus 582 kl~DfGla~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~---- 654 (710)
||+|||+++........ ...+..+|.+||.... ..++.++||||+||++|||+||+.|+.+.......... ..
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 253 (362)
T 3pg1_A 174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253 (362)
T ss_dssp EECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999999754322211 1224455778887765 66889999999999999999999998743311100000 00
Q ss_pred ------------cccccccccc-CCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 655 ------------LGEMYNENEV-GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 655 ------------~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+....... .....+ ......+.+++.+|++.||++|||+.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000000000 000001 1113457799999999999999999999874
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=316.90 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=186.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEc------CCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~ 515 (710)
..|. ..+.||+|+||.||+|.. .+|+.||||.+.......+.+.+|++++.++ +||||+++++++.. .+.
T Consensus 24 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 24 GIFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CcEE--EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 4455 778999999999999986 6899999999987666677889999999998 79999999999987 467
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 8999999999999999964 468888999999999999999998 999999999999999999999999999876
Q ss_pred ccccCC--CCcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 592 TQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 592 ~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
...... ....+...|.+||... ...++.++|||||||++|||+||+.|+.+...... .. .......+. .
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~-~~~~~~~~~-~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LF-LIPRNPAPR-L 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH-HHHHSCCCC-C
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HH-HhhcCcccc-C
Confidence 532211 1112344577788765 45678899999999999999999999864321110 00 000000000 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..... ...+.+++.+||+.||++||++.|+++
T Consensus 255 -~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 -KSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -SCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -Ccccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 01111 245678889999999999999999986
No 254
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=309.12 Aligned_cols=243 Identities=16% Similarity=0.176 Sum_probs=185.3
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-----hhHHHHHHHHHHHhccCCCCceeEEEEEEc--CC
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RH 514 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~ 514 (710)
.+.|. ..+.||+|+||.||++.. .+|..||||.++... ...+.+.+|++++++++||||+++++++.. .+
T Consensus 4 ~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 4 IGKYL--MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp -CCBC--CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred cccee--EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence 34456 778999999999999986 678999999997642 235678999999999999999999999854 45
Q ss_pred ceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 515 QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
..++||||+++| +.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 789999999976 6666643 568899999999999999999998 99999999999999999999999999987
Q ss_pred cccccCCC----CcccccccCchhhhhccC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 591 LTQLADGS----FPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 591 ~~~~~~~~----~~~~~~~~~~~e~~~~~~--~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
........ ...+...+.+||...... .+.++|||||||++|||+||+.|+....... ....+.... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~-~ 230 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK------LFENIGKGS-Y 230 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCC-C
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH------HHHHHhcCC-C
Confidence 65321111 112344567788776543 3678999999999999999999986432110 011111111 1
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..+.. ....+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 AIPGD---CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCSS---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCc---cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111 12356688899999999999999999974
No 255
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7e-36 Score=327.24 Aligned_cols=243 Identities=17% Similarity=0.186 Sum_probs=181.1
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCC------ceeEEEee
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QAYLLYDY 522 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~Ey 522 (710)
..+.||+|+||.||+|.. .+|+.||||++.... +...+|++++++++|||||+++++|...+ ..++||||
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 778999999999999986 579999999997543 23447999999999999999999986421 36799999
Q ss_pred cCCCChhhhhh------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CceEEcccCcccccccc
Q 005177 523 LPNGNLSEKIR------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 523 ~~~gsL~~~l~------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla~~~~~~ 595 (710)
+++ ++.+.+. ..+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.....
T Consensus 135 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~ 210 (420)
T 1j1b_A 135 VPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210 (420)
T ss_dssp CCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhcccC
Confidence 985 6666553 2578899999999999999999998 99999999999999965 56899999999865322
Q ss_pred CCC-CcccccccCchhhhhcc-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-c--------ccc-------cc
Q 005177 596 DGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D--------GLL-------GE 657 (710)
Q Consensus 596 ~~~-~~~~~~~~~~~e~~~~~-~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~--------~~~-------~~ 657 (710)
... ...++.+|.+||+..+. .++.++|||||||++|||++|+.||.+......... . ..+ .+
T Consensus 211 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~ 290 (420)
T 1j1b_A 211 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 290 (420)
T ss_dssp CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC
T ss_pred CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence 211 12245568888887554 689999999999999999999999875432110000 0 000 00
Q ss_pred cccccccCCCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 MYNENEVGSSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ~~~~~~~~~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...+. .. ...+. .....+.+++.+|++.||++|||+.|++++
T Consensus 291 ~~~p~-~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 291 FKFPQ-IK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCC-CC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCc-cC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000 00 01111 113567899999999999999999999864
No 256
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.8e-36 Score=325.77 Aligned_cols=250 Identities=17% Similarity=0.194 Sum_probs=183.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc------eeEEEeec
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ------AYLLYDYL 523 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------~~lv~Ey~ 523 (710)
..+.||+|+||.||+|....+..||+|++..... ...+|++++++++|||||++++++...+. .++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 7889999999999999987777799999875432 23468999999999999999999976443 78999999
Q ss_pred CCCChhhhh-----hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCccccccccCC
Q 005177 524 PNGNLSEKI-----RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 524 ~~gsL~~~l-----~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~ 597 (710)
+++.+.... ...+++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.......
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 875433332 23678889999999999999999998 999999999999999 799999999999986533222
Q ss_pred C-CcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-cc--------cc----ccccccc
Q 005177 598 S-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG--------LL----GEMYNEN 662 (710)
Q Consensus 598 ~-~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~--------~~----~~~~~~~ 662 (710)
. ...+..+|.+||...+ ..++.++||||+||++|||++|+.||.+......... .. .. .......
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~ 277 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSC
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhc
Confidence 1 2224556788887754 4589999999999999999999999875432110000 00 00 0000000
Q ss_pred c-cCCCcchH-----HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--Hhcc
Q 005177 663 E-VGSSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 705 (710)
Q Consensus 663 ~-~~~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~--L~~~ 705 (710)
. ......+. .....+.+++.+||+.||++|||+.|++++ ++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred cccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 0 00001111 123467899999999999999999999875 4444
No 257
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6.8e-36 Score=317.65 Aligned_cols=250 Identities=14% Similarity=0.168 Sum_probs=168.9
Q ss_pred hhhcCCchh-hhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCceeEEEEEEc----CCc
Q 005177 442 VLRSFNSTE-CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 515 (710)
Q Consensus 442 ~~~~~~~~~-~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 515 (710)
+.+.|. . .++||+|+||.||+|.. .+|+.||||++.......+ +....+..++||||+++++++.. ++.
T Consensus 26 ~~~~y~--i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQ--LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeE--ecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 334454 4 34699999999999986 5799999999976433222 23334566789999999999876 445
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcccCc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGF 588 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGl 588 (710)
.++||||+++|+|.+++.. .+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 8999999999999999975 368999999999999999999999 9999999999999986 45599999999
Q ss_pred cccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 589 KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 589 a~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
++...........+...|.+||......++.++|||||||++|||+||+.|+........... ....+.........+
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTT
T ss_pred ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhhhccccccCch
Confidence 976543322222345557788888777788899999999999999999999874332111000 000000000000011
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.+......+.+++.+|++.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111223467789999999999999999999873
No 258
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.3e-34 Score=310.30 Aligned_cols=287 Identities=20% Similarity=0.183 Sum_probs=207.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 66667777777666655555666666777777777766666666666667777777777666643333356666677777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|.+++..|..|.++++|++|++++|.+++. .++.+++|+.|++++|.+++ +...++|+.|++++|.++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV 219 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCE
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeee
Confidence 777766666666666666777777776666543 24455666666666665543 2334567777888877764
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
. |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..
T Consensus 220 ~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~ 293 (390)
T 3o6n_A 220 V-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQP 293 (390)
T ss_dssp E-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSC
T ss_pred c-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCC
Confidence 3 322 246888899999888764 467888899999999999988888888889999999999998885 5667778
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccc
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
+++|++|++++|+++ .+|..+..+++|+.|++++|.++.. | +...+.|+.|++++|.+++.
T Consensus 294 l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 294 IPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 889999999999888 5677778888899999999998753 3 56678889999999988864
No 259
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.5e-35 Score=318.77 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=190.0
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----Cce
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQA 516 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~~ 516 (710)
.|. ..+.||+|+||.||+|.. .+|..||||++.... ...+.+.+|++++.+++|||||++++++... ...
T Consensus 28 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 28 RYT--NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cEE--EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 455 788999999999999985 678999999997532 2356788999999999999999999999764 368
Q ss_pred eEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCcccccccc
Q 005177 517 YLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 517 ~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~ 595 (710)
++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99999998 599998875 578999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-----CCcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc-cc--------ccc---
Q 005177 596 DG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------LGE--- 657 (710)
Q Consensus 596 ~~-----~~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~-~~--------~~~--- 657 (710)
.. ....++.+|.+||... ...++.++||||+||++|||+||+.||.+.......... .. ...
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 11 1112455577888654 445899999999999999999999998754322110000 00 000
Q ss_pred -----cccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 -----MYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 -----~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.....+......+ ......+.+++.+|++.||++|||+.|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000001 1123467899999999999999999999874
No 260
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=311.28 Aligned_cols=248 Identities=19% Similarity=0.241 Sum_probs=180.0
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCCCceeEEEEEE--------------cC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY--------------NR 513 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~--------------~~ 513 (710)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++. +.
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 778999999999999986 469999999997643 34567889999999999999999999884 34
Q ss_pred CceeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCcccc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYL 591 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~ 591 (710)
+..++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARI 170 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred CceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence 67899999998 699999876 568888999999999999999998 999999999999998 567999999999986
Q ss_pred ccccCC-----CCcccccccCchhhhhc-cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-cc--------ccc
Q 005177 592 TQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG--------LLG 656 (710)
Q Consensus 592 ~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~-~~--------~~~ 656 (710)
...... ....+..++.+||.... ..++.++|||||||++|||+||+.|+........... .. ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
T 2i6l_A 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQ 250 (320)
T ss_dssp C--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHH
T ss_pred cCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhh
Confidence 532111 11113445777786654 6788999999999999999999999875432110000 00 000
Q ss_pred cc-------ccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 657 EM-------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 657 ~~-------~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
+. ............ ......+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 251 ELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 000000000000 1123567889999999999999999999863
No 261
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-35 Score=329.59 Aligned_cols=252 Identities=12% Similarity=0.056 Sum_probs=192.1
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCC-CceeEEEEEEcCCceeEEEe
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E 521 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ...+.+|++++..++|+ +|..+..++.+.+..++|||
T Consensus 7 ~~y~--i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFR--LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEE--CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEE--EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 3455 778999999999999985 7899999998875432 34577899999999874 55556666677888999999
Q ss_pred ecCCCChhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCceEEcccCcccccccc
Q 005177 522 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 595 (710)
Q Consensus 522 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfGla~~~~~~ 595 (710)
|+ +|+|.+++.. .+++.++..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 8999999963 678999999999999999999998 99999999999999 68899999999999865432
Q ss_pred CCC---------CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCC
Q 005177 596 DGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 666 (710)
Q Consensus 596 ~~~---------~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (710)
... ...+...|.+||......++.++|||||||++|||++|+.||.+........ ....+........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~---~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ---KYEKISEKKVATS 236 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH---HHHHHHHHHHHSC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH---HHHHHhhcccccc
Confidence 211 1224455778898888889999999999999999999999997533211100 0011110000000
Q ss_pred Cc-chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhcc
Q 005177 667 SS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 705 (710)
Q Consensus 667 ~~-~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~ 705 (710)
.. .......++.+++..||+.+|++||++.++++.|+.+
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00 0011124678899999999999999999999998876
No 262
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=317.54 Aligned_cols=245 Identities=18% Similarity=0.256 Sum_probs=184.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc---hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.||+|+||.||+|.... .||||.++... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 67899999999999998643 49999997532 22456778999999999999999999999999999999999999
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccC-------
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------- 596 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~------- 596 (710)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 115 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~ 190 (319)
T 2y4i_B 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190 (319)
T ss_dssp EHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CCS
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccccccc
Confidence 99999976 468899999999999999999998 999999999999998 6799999999987542111
Q ss_pred CCCcccccccCchhhhhc---------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCC
Q 005177 597 GSFPAKIAWTESGEFYNA---------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 667 (710)
Q Consensus 597 ~~~~~~~~~~~~~e~~~~---------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (710)
.....+...|.+||.... ..++.++|||||||++|||+||+.|+....... .... ......+. .. .
T Consensus 191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~-~~~~~~~~-~~-~ 265 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQ-MGTGMKPN-LS-Q 265 (319)
T ss_dssp CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHH-HHTTCCCC-CC-C
T ss_pred cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-hccCCCCC-CC-c
Confidence 011123444677787653 346888999999999999999999986432110 0000 00000111 00 0
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHhccCCC
Q 005177 668 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 708 (710)
Q Consensus 668 ~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~ 708 (710)
. .....+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 266 ~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 266 I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 0 0113466888999999999999999999999998753
No 263
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.8e-35 Score=314.11 Aligned_cols=256 Identities=16% Similarity=0.205 Sum_probs=195.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCC------ceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++......+.+.+|++++++++|+| ++++++++.+.+.
T Consensus 14 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYE--IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceE--EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 3455 778999999999999985 57899999999876555677889999999887765 9999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 577 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-------------- 577 (710)
.++||||+ +|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 8899999865 357889999999999999999998 9999999999999987
Q ss_pred -----CCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-c
Q 005177 578 -----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-I 651 (710)
Q Consensus 578 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~-~ 651 (710)
++.+||+|||+++........ ..++..|.+||......++.++|||||||++|||+||+.|+.......... .
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCCCS-SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCcccccc-ccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 668999999999865433222 224455788898888889999999999999999999999987432211000 0
Q ss_pred cccc-------------cccccc---cccC-----------------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 652 DGLL-------------GEMYNE---NEVG-----------------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 652 ~~~~-------------~~~~~~---~~~~-----------------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
.... ...... .+.. ...........+.+++.+|++.||++|||+.|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 0000 000000 0000 000011234668899999999999999999999
Q ss_pred HHH--HhccC
Q 005177 699 LKL--LSGLK 706 (710)
Q Consensus 699 l~~--L~~~~ 706 (710)
+++ ++.++
T Consensus 327 l~hp~f~~~~ 336 (339)
T 1z57_A 327 LKHPFFDLLK 336 (339)
T ss_dssp TTSGGGGGGG
T ss_pred hcCHHHHHHh
Confidence 864 44443
No 264
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=327.40 Aligned_cols=304 Identities=22% Similarity=0.200 Sum_probs=236.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.+++|||++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999988899999999999999999999888899999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCC-CCcccccccccccccccccccccccCCccccCC---------------
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM--------------- 244 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l--------------- 244 (710)
++|++++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..++.+
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997666679999999999999999987 579999999999999999998765544333322
Q ss_pred --------------------------------------------------------------------------------
Q 005177 245 -------------------------------------------------------------------------------- 244 (710)
Q Consensus 245 -------------------------------------------------------------------------------- 244 (710)
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence
Q ss_pred --------------CccchhccccccCCccCchhc------------------------------------------cCC
Q 005177 245 --------------SEVQYLDIAGANLSGSIPKEL------------------------------------------SNL 268 (710)
Q Consensus 245 --------------~~L~~L~ls~n~l~g~~p~~l------------------------------------------~~l 268 (710)
++|+.|++++|.+++ +|..+ ..+
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccC
Confidence 334444444444431 22211 345
Q ss_pred CCCcEEEccccccCCCC--CccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC-cccCCCCCCcE
Q 005177 269 TKLESLFLFRNQLAGQV--PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEI 345 (710)
Q Consensus 269 ~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 345 (710)
++|+.|++++|.+++.. |..+..+++|++|++++|.+.+..+ .+..+++|+.|++++|.+.+..| ..+..+++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 77888888888887643 5666777788888888887775433 37777777777777777776554 45667777777
Q ss_pred EeccCCCCCCCCCcccCCCCCCcEEECCCCcCC-ccCcccccCCCceeeEecccCCcccchh
Q 005177 346 LFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN-GSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 346 L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~-g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
|++++|.+++..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..|
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCCh
Confidence 777777777767777777777777777777776 5667777777777777777777776654
No 265
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.9e-35 Score=320.02 Aligned_cols=196 Identities=18% Similarity=0.181 Sum_probs=163.6
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CC-----CceeEEEEEEcCCc
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HK-----NLIRLLGFCYNRHQ 515 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~ 515 (710)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+..|+++++.++ |+ +|+++++++..++.
T Consensus 53 ~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 53 MDRYE--IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp TTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeEE--EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 44555 778999999999999985 57899999999866555667778888888775 44 49999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--CCCceEEcccCcc
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFK 589 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~--~~~~~kl~DfGla 589 (710)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 599999865 368999999999999999999952 23899999999999995 5788999999999
Q ss_pred ccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCC
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 643 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~ 643 (710)
+........ ..++.+|.+||+.....++.++|||||||++|||+||+.||.+.
T Consensus 209 ~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQRIYQ-YIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCCCCS-SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeccccccc-ccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876433222 22445578889988888999999999999999999999998743
No 266
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.3e-36 Score=317.14 Aligned_cols=241 Identities=16% Similarity=0.169 Sum_probs=182.6
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHH-HhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||+++... .....+..|+.. ++.++|||||++++++.+++..++||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 678899999999999985 789999999997642 223344444444 7889999999999999999999999999985
Q ss_pred CChhhhhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC-C
Q 005177 526 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-S 598 (710)
Q Consensus 526 gsL~~~l~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~ 598 (710)
+|.+++.. .+++..+..++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 135 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 -SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp -EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred -cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 99888753 5789999999999999999999732 899999999999999999999999999876532110 0
Q ss_pred CcccccccCchhhhh----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 599 FPAKIAWTESGEFYN----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 599 ~~~~~~~~~~~e~~~----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
...++..|.+||... ...++.++|||||||++|||+||+.|+........ ...+.......... .....
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~ 284 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-----QLKQVVEEPSPQLP--ADKFS 284 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-----HHHHHHHSCCCCCC--GGGSC
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-----HHHHHhcCCCCCCC--cccCC
Confidence 112334477888753 34688899999999999999999999874322110 01111111101101 11123
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 675 KLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
..+.+++.+||+.||++|||+.|+++
T Consensus 285 ~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 285 AEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhc
Confidence 45778999999999999999999986
No 267
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-35 Score=318.04 Aligned_cols=252 Identities=19% Similarity=0.212 Sum_probs=188.5
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcC-----Cc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++||||+++++++... ..
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 11 SDFQ--LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cceE--EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4455 778999999999999986 579999999997532 2356678999999999999999999998764 67
Q ss_pred eeEEEeecCCCChhhhhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 516 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
.++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 899999998 699998865 578999999999999999999998 999999999999999999999999999876532
Q ss_pred cCCC------------CcccccccCchhhhh-ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccc-----------
Q 005177 595 ADGS------------FPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP----------- 650 (710)
Q Consensus 595 ~~~~------------~~~~~~~~~~~e~~~-~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~----------- 650 (710)
.... ...++.+|.+||... ...++.++|||||||++|||++|+.|+.+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 1110 011344577788654 4678899999999999999999999987433110000
Q ss_pred ---cc----ccccccccccccCCCcch----HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 ---ID----GLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ---~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ....+............. ......+.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000000000000000000 1123467789999999999999999999874
No 268
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.1e-35 Score=312.66 Aligned_cols=243 Identities=19% Similarity=0.198 Sum_probs=169.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccc--hhHHHHHHHHH-HHhccCCCCceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.||+|+||.||+|.. .+|+.||||++.... .....+..|+. +++.++||||+++++++.+++..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 678899999999999986 579999999998642 22334444544 77888999999999999999999999999985
Q ss_pred CChhhhhh-------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCC
Q 005177 526 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 598 (710)
Q Consensus 526 gsL~~~l~-------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 598 (710)
+|.+++. ...++....+++.|+++||+|||+. ++|+||||||+||+++.++.+||+|||+++........
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 8877764 2568899999999999999999985 28999999999999999999999999998765432211
Q ss_pred -CcccccccCchhhh----hccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC-CCcchHH
Q 005177 599 -FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG-SSSSLQD 672 (710)
Q Consensus 599 -~~~~~~~~~~~e~~----~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 672 (710)
...+...+.+||.. ....++.++|||||||++|||+||+.|+.......... .++....... .......
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 257 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-----TQVVKGDPPQLSNSEERE 257 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSCCCCCCCCSSCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH-----HHHhcCCCCCCCCccccc
Confidence 11234446778876 45568889999999999999999999987433211111 1111111000 0000011
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 673 EIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 673 ~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
....+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 2345778999999999999999999875
No 269
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.5e-35 Score=323.07 Aligned_cols=240 Identities=18% Similarity=0.193 Sum_probs=179.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+++..++|||||. |+|
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 457899999999987666789999999997543 34577899999876 89999999999999999999999996 699
Q ss_pred hhhhhcCC---------CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-------------CceEEccc
Q 005177 529 SEKIRTKR---------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-------------MEPHLAEF 586 (710)
Q Consensus 529 ~~~l~~~~---------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~-------------~~~kl~Df 586 (710)
.+++.... .+..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997532 1223467999999999999998 99999999999999754 48999999
Q ss_pred CccccccccCCC------CcccccccCchhhhhc-------cCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCccccc
Q 005177 587 GFKYLTQLADGS------FPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID 652 (710)
Q Consensus 587 Gla~~~~~~~~~------~~~~~~~~~~~e~~~~-------~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~ 652 (710)
|+++........ ...++..|.+||+... ..++.++|||||||++|||+| |+.|+.+......
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---- 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---- 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH----
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH----
Confidence 999875432211 1124455778887754 568889999999999999999 8888764322110
Q ss_pred ccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 653 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
............. ..........+.+++.+|++.||++|||+.|+++
T Consensus 249 ~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0111111111011 1112344567889999999999999999999985
No 270
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1e-35 Score=314.09 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=188.2
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhccC--CCCceeEEEEEEcC
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNR 513 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~ 513 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++ ||||+++++++.++
T Consensus 43 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 43 SQYQ--VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp TTEE--EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3455 778999999999999984 7899999999986432 2345677899999986 59999999999999
Q ss_pred CceeEEEeecCC-CChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcccCcc
Q 005177 514 HQAYLLYDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFK 589 (710)
Q Consensus 514 ~~~~lv~Ey~~~-gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla 589 (710)
+..++||||+.+ ++|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999986 899999865 578899999999999999999998 999999999999999 7899999999998
Q ss_pred ccccccCCCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCc
Q 005177 590 YLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 668 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (710)
+...........+...|.+||......+ +.++|||||||++|||+||+.|+...... .... .....
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------------~~~~-~~~~~ 264 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRGQ-VFFRQ 264 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHCC-CCCSS
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------------hccc-ccccc
Confidence 8764332222224445778887766554 67899999999999999999998632210 0000 00011
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 669 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 669 ~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ...+.+++.+||+.||++|||+.|+++.
T Consensus 265 ~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 265 RV---SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 2356788999999999999999999874
No 271
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.1e-35 Score=309.29 Aligned_cols=252 Identities=20% Similarity=0.273 Sum_probs=186.8
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc--CCCcEEEEEEeeccch---hHHHHHHHHHHHhcc---CCCCceeEEEEEE----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCY---- 511 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~--~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~---- 511 (710)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+++++++ +||||++++++|.
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 11 QQYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hcee--eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3455 778999999999999986 5789999999975322 133456677766655 8999999999997
Q ss_pred -cCCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEccc
Q 005177 512 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 586 (710)
Q Consensus 512 -~~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df 586 (710)
.....++||||++ |+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999998 699999865 368899999999999999999998 9999999999999999999999999
Q ss_pred CccccccccCC-CCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCC---------------ccc
Q 005177 587 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKP 650 (710)
Q Consensus 587 Gla~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~---------------~~~ 650 (710)
|+++....... ....+...+.+||......++.++|||||||++|||+||+.|+.+..... .|.
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 99876542211 11223445778898888888999999999999999999999987433211 010
Q ss_pred ccccc-cccccccccCC-CcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 651 IDGLL-GEMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 651 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ........... ..........+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 00000000000 00001123456789999999999999999999864
No 272
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.3e-35 Score=306.18 Aligned_cols=231 Identities=15% Similarity=0.178 Sum_probs=174.9
Q ss_pred hhhhhcCCchhh-hhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHH-hccCCCCceeEEEEEEc----
Q 005177 440 NDVLRSFNSTEC-EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYN---- 512 (710)
Q Consensus 440 ~~~~~~~~~~~~-~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~---- 512 (710)
.++...|. .. +.||+|+||.||+|.. .+|+.||||.++.. ..+.+|++++ +..+||||+++++++..
T Consensus 13 ~~~~~~y~--~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 13 NAIIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp SCGGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccccchh--hcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 34445554 44 6799999999999985 67999999999743 3566777777 56689999999999976
Q ss_pred CCceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCceEEcc
Q 005177 513 RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAE 585 (710)
Q Consensus 513 ~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~---~~~~kl~D 585 (710)
++..++||||+++|+|.+++.. .+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 6678999999999999999975 368999999999999999999998 9999999999999998 78899999
Q ss_pred cCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccC
Q 005177 586 FGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 665 (710)
Q Consensus 586 fGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (710)
||+++.... ..++.++||||+||++|||+||+.|+........... ....+.......
T Consensus 164 fg~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~--~~~~~~~~~~~~ 221 (299)
T 3m2w_A 164 FGFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEF 221 (299)
T ss_dssp CTTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--SCCSSCTTCCSS
T ss_pred ccccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--HHHHHhhccccC
Confidence 998764321 2346678999999999999999999874332111000 001111111000
Q ss_pred CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 666 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 666 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
...........+.+++.+|++.||++|||+.|++++
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 222 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001111223567789999999999999999999874
No 273
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-33 Score=323.65 Aligned_cols=290 Identities=17% Similarity=0.113 Sum_probs=262.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
++.++.|++++|.+....+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 78999999999999865555678899999999999999999888999999999999999999998888999999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|.+++..+..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+++. .++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 999999976666689999999999999999999999999999999999999999874 35678899999999999875
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
+...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +.++..+++|+.|+|++|.+++..|..+..
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 344578999999999997544332 3689999999999997 478999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccc
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ .+|..+..++.|+.|++++|++++.
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 9999999999999996 6777888999999999999999 6899999999999999999999875
No 274
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.2e-35 Score=316.95 Aligned_cols=248 Identities=15% Similarity=0.168 Sum_probs=188.4
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccchhHHHHHHHHHHHhccC-----------CCCceeEEEEEEcCC---
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYNRH--- 514 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~~~--- 514 (710)
..+.||+|+||.||+|.. .+|+.||||.+.......+.+.+|++++.+++ ||||+++++++...+
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 778999999999999985 78999999999876666777888999988876 899999999998654
Q ss_pred -ceeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec------CCCceEE
Q 005177 515 -QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD------ENMEPHL 583 (710)
Q Consensus 515 -~~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~------~~~~~kl 583 (710)
..++||||+ +|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+|||++ ..+.+||
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~~kl 179 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKI 179 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEEEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcceEEE
Confidence 789999999 8899999864 4788999999999999999999853 899999999999994 4458999
Q ss_pred cccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccc------
Q 005177 584 AEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGE------ 657 (710)
Q Consensus 584 ~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~------ 657 (710)
+|||+++......... .++..|.+||......++.++|||||||++|||+||+.||................+
T Consensus 180 ~Dfg~a~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 258 (373)
T 1q8y_A 180 ADLGNACWYDEHYTNS-IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258 (373)
T ss_dssp CCCTTCEETTBCCCSC-CSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred cccccccccCCCCCCC-CCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcC
Confidence 9999998765332222 244557888988888899999999999999999999999874321100000000000
Q ss_pred ---------------ccccc---------ccC--------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 658 ---------------MYNEN---------EVG--------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 658 ---------------~~~~~---------~~~--------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.++.. ... ...........+.+++.+||+.||++|||+.|++++
T Consensus 259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 00000 000 001123455678899999999999999999999874
No 275
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.3e-34 Score=304.64 Aligned_cols=242 Identities=16% Similarity=0.150 Sum_probs=185.3
Q ss_pred cCCchhhhhhcCCCCCccEEEEcCCCcEEEEEEeecc---chhHHHHHHHHHHHhccCC--CCceeEEEEEEcCCceeEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLL 519 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~---~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv 519 (710)
.|. ..+.||+|+||.||++...+|+.||||.+... ....+.+.+|++++.+++| |||+++++++.+++..++|
T Consensus 29 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 29 IYS--ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEE--EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred eEE--EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 355 77899999999999999888999999999753 2345678899999999984 9999999999999999999
Q ss_pred EeecCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC
Q 005177 520 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 597 (710)
Q Consensus 520 ~Ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 597 (710)
|| +.+|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++.......
T Consensus 107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 99 567899999975 568889999999999999999998 9999999999999975 8999999999876543221
Q ss_pred C----CcccccccCchhhhhc-----------cCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccc
Q 005177 598 S----FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 662 (710)
Q Consensus 598 ~----~~~~~~~~~~~e~~~~-----------~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 662 (710)
. ...+...|.+||.... ..++.++|||||||++|||+||+.|+........ ......++.
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~ 256 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHAIIDPN 256 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHCTT
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-----HHHHHHhcc
Confidence 1 1123445777887654 4678899999999999999999999864322110 011111111
Q ss_pred cc-CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 663 EV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 663 ~~-~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
.. ..+... ...+.+++.+||+.||++||++.|+++.
T Consensus 257 ~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 257 HEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp SCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 001111 2356788899999999999999999864
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=311.60 Aligned_cols=239 Identities=16% Similarity=0.150 Sum_probs=182.4
Q ss_pred hhhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch-------hHHHHHHHHHHHhcc----CCCCceeEEEE
Q 005177 442 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTV----RHKNLIRLLGF 509 (710)
Q Consensus 442 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~e~~~l~~l----~H~niv~l~g~ 509 (710)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++.++ +||||++++++
T Consensus 29 ~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 29 FEAEYR--LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ----CE--EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhceE--EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344566 788999999999999985 6789999999975422 233456788888888 89999999999
Q ss_pred EEcCCceeEEEee-cCCCChhhhhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCceEEcc
Q 005177 510 CYNRHQAYLLYDY-LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAE 585 (710)
Q Consensus 510 ~~~~~~~~lv~Ey-~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~-~~~~~kl~D 585 (710)
+.+.+..++|||| +++++|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 789999999965 578999999999999999999998 999999999999999 889999999
Q ss_pred cCccccccccCCCCcccccccCchhhhhccCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCccccccccccccccccc
Q 005177 586 FGFKYLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 664 (710)
Q Consensus 586 fGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (710)
||+++...........+...+.+||......+ +.++|||||||++|||+||+.|+...... .... .
T Consensus 184 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------~~~~-~ 250 (312)
T 2iwi_A 184 FGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------LEAE-L 250 (312)
T ss_dssp CSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHTC-C
T ss_pred cchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------hhhc-c
Confidence 99988764332222224445778887765554 45899999999999999999998632110 0010 0
Q ss_pred CCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 005177 665 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 701 (710)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~~ 701 (710)
..... ....+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 HFPAH---VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CCCTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCccc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 12356788999999999999999999874
No 277
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=306.91 Aligned_cols=244 Identities=15% Similarity=0.167 Sum_probs=170.2
Q ss_pred cCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 445 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 445 ~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.++..+++.++||||+++++++.+++..++||
T Consensus 26 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 26 DLE--NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GEE--EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccc--ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 355 678899999999999986 5799999999986432 2344555666788899999999999999999999999
Q ss_pred eecCCCChhhhhh---cCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeEecCCCceEEcccCccccccccC
Q 005177 521 DYLPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 596 (710)
Q Consensus 521 Ey~~~gsL~~~l~---~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 596 (710)
||+ ++.+..+.. ...++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 445554443 357889999999999999999998 5 89999999999999999999999999987653221
Q ss_pred CC-CcccccccCchhhhh-----ccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcch
Q 005177 597 GS-FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 670 (710)
Q Consensus 597 ~~-~~~~~~~~~~~e~~~-----~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (710)
.. ...+...+.+||... ...++.++|||||||++|||+||+.|+........ ....+....... .+..
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~-~~~~ 253 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-----VLTKVLQEEPPL-LPGH 253 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHHHHHSCCCC-CCSS
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-----HHHHHhccCCCC-CCcc
Confidence 11 112344467788763 45678899999999999999999999874322111 011111111000 0000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 671 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 671 ~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
......+.+++.+||+.||++||++.|+++
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 011245678889999999999999999876
No 278
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-34 Score=310.27 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=190.7
Q ss_pred hcCCchhhhhhcCCCCCccEEEEc-CCC-cEEEEEEeeccchhHHHHHHHHHHHhccCCCC------ceeEEEEEEcCCc
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVL-PTG-ITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~-~~g-~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 515 (710)
+.|. ..+.||+|+||.||+|.. .++ ..||||.++......+.+.+|++++++++|++ ++.+++++...+.
T Consensus 19 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYE--IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEE--EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 3455 778999999999999985 344 79999999876556777889999999998877 9999999999999
Q ss_pred eeEEEeecCCCChhhhhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----------------
Q 005177 516 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---------------- 575 (710)
Q Consensus 516 ~~lv~Ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl---------------- 575 (710)
.++||||+ +|++.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 5677777653 468999999999999999999998 99999999999999
Q ss_pred ---cCCCceEEcccCccccccccCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccc-
Q 005177 576 ---DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI- 651 (710)
Q Consensus 576 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~- 651 (710)
+.++.+||+|||+++........ ..++..|.+||......++.++|||||||++|||+||+.|+...........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCS-SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccCCCcEEEeecCccccccccccC-CcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 66789999999999865433222 2244557788988888899999999999999999999999874332110000
Q ss_pred cccc-------------ccc-ccccccC-------------------CCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 652 DGLL-------------GEM-YNENEVG-------------------SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 652 ~~~~-------------~~~-~~~~~~~-------------------~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
.... ... ....... ...........+.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 0000 000 0000000 000011234567899999999999999999999
Q ss_pred HHH
Q 005177 699 LKL 701 (710)
Q Consensus 699 l~~ 701 (710)
+++
T Consensus 332 l~h 334 (355)
T 2eu9_A 332 LLH 334 (355)
T ss_dssp TTS
T ss_pred hcC
Confidence 853
No 279
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=319.78 Aligned_cols=238 Identities=17% Similarity=0.184 Sum_probs=174.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEEeecCCCCh
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
..+.||+|+||.||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.+++..|+|||||+ |+|
T Consensus 28 ~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred cCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 778999999999665555689999999997532 23356789999998 79999999999999999999999997 699
Q ss_pred hhhhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-----CCceEEcccCccccccccCC---
Q 005177 529 SEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----NMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 529 ~~~l~~~---~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~-----~~~~kl~DfGla~~~~~~~~--- 597 (710)
.+++... ..+.....++.|+++||+|||+. +|+||||||+|||++. ...+||+|||+++.......
T Consensus 105 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~ 181 (432)
T 3p23_A 105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181 (432)
T ss_dssp HHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--------
T ss_pred HHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCccee
Confidence 9999752 34445678999999999999998 9999999999999943 34688999999986542211
Q ss_pred --CCcccccccCchhhhh---ccCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcccccccccccccccccCCCcchH
Q 005177 598 --SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 671 (710)
Q Consensus 598 --~~~~~~~~~~~~e~~~---~~~~~~~~DVySfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (710)
....++.+|.+||+.. ...++.++|||||||++|||+| |+.|+........ ....... ...... . ..
T Consensus 182 ~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~~~~~~~-~~~~~~-~--~~ 254 (432)
T 3p23_A 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NILLGAC-SLDCLH-P--EK 254 (432)
T ss_dssp ----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---HHHTTCC-CCTTSC-T--TC
T ss_pred eccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---HHHhccC-CccccC-c--cc
Confidence 1112455577888776 4567789999999999999999 7777643221110 0000000 000011 1 11
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 672 DEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 672 ~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
.....+.+++.+|++.||++|||+.||++
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 23345678999999999999999999984
No 280
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-32 Score=304.34 Aligned_cols=297 Identities=16% Similarity=0.148 Sum_probs=255.8
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+++. | .+.. +++|++|+|++|.+++. | ++.+++|++|+|++|.+++. | ++++++|++|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~--l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEK--LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGG--CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCEEEccCCCcccC-h-hhcc--cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 477899999999874 4 5666 89999999999999874 4 88999999999999999975 4 89999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|.+++ +| ++++++|++|++++|++++. | ++++++|++|++++|...+.+ .++.+++|+.|++++|.+++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 99999997 45 89999999999999999974 3 889999999999999776666 47889999999999999987
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccC
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 315 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 315 (710)
+| ++.+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.+
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~ 255 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSK 255 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCC
Confidence 55 88899999999999999975 38889999999999999998 56 788999999999999999876666655
Q ss_pred CC-------CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcc--------cCCCCCCcEEECCCCcCCcc
Q 005177 316 LK-------NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN--------LGRNSKLRWVDVSTNNFNGS 380 (710)
Q Consensus 316 l~-------~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~--------l~~~~~L~~L~ls~N~l~g~ 380 (710)
++ +|+.|++++|.+.+.+| +..+++|+.|++++|.+.|.+|.. ++.+++|+.|++++|+++|
T Consensus 256 L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~- 332 (457)
T 3bz5_A 256 LTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE- 332 (457)
T ss_dssp CCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC-
T ss_pred CCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc-
Confidence 54 56777777777777776 567899999999999988777642 5566889999999999998
Q ss_pred CcccccCCCceeeEecccCCcccc
Q 005177 381 IPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 381 ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
+| ++.++.|+.|++++|++++.
T Consensus 333 l~--l~~l~~L~~L~l~~N~l~~l 354 (457)
T 3bz5_A 333 LD--VSHNTKLKSLSCVNAHIQDF 354 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCCBC
T ss_pred cc--cccCCcCcEEECCCCCCCCc
Confidence 43 88899999999999999983
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-32 Score=289.53 Aligned_cols=268 Identities=20% Similarity=0.241 Sum_probs=181.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
.+.|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 357888888888888777778888888888888888888888888888888888888888887 5666555 7888888
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCC--CCCcccccccccccccccccccccccCCccccCCCccchhccccccC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN--DQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l 257 (710)
+++|++++..+..|.++++|+.|++++|.++ +..|..+..+ +|+.|++++|.+++ +|..+. ++|++|++++|++
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 8888888766667888888888888888885 3556666666 67777777776664 444433 5666666666666
Q ss_pred CccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCccc
Q 005177 258 SGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL 337 (710)
Q Consensus 258 ~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 337 (710)
++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..+..+
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 6655566666666666666666666655555666666666666666665 455556666666666666666665444444
Q ss_pred CC------CCCCcEEeccCCCCC--CCCCcccCCCCCCcEEECCCC
Q 005177 338 VQ------LPSLEILFIWNNYFS--GSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 338 ~~------l~~L~~L~L~~N~l~--g~~p~~l~~~~~L~~L~ls~N 375 (710)
.. .++|+.|++++|.+. +..|..+..+++|+.+++++|
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 32 234555555555544 334444444555555555444
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.4e-34 Score=325.88 Aligned_cols=251 Identities=14% Similarity=0.084 Sum_probs=187.1
Q ss_pred hhcCCchhhhhhcCCCCCccEEEEc-CCCcEEEEEEeecc--chhHHHHHHHHHHHhccCCCCceeEEEEEEc------C
Q 005177 443 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYN------R 513 (710)
Q Consensus 443 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~ 513 (710)
...|. ..+.||+|+||.||+|.. .+|..||||+++.. ....+.+.+|++++++++|||||++++++.. +
T Consensus 13 ~grY~--i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWE--MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----C--CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 34566 788999999999999986 67999999998753 2346678899999999999999999999765 6
Q ss_pred CceeEEEeecCCCChhhhhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---eEEcc
Q 005177 514 HQAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAE 585 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~---~kl~D 585 (710)
+..++||||+++|+|.+++.. .+++..+..|+.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 678999999999999999975 467888999999999999999998 9999999999999997664 99999
Q ss_pred cCccccccccCCC-CcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCccccc------------
Q 005177 586 FGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------ 652 (710)
Q Consensus 586 fGla~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~------------ 652 (710)
||+++........ ...+...|.+||...+..++.++|||||||++|||+||+.||........|...
T Consensus 168 FG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 168 LGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred cccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 9999875432211 112444577888888888999999999999999999999998753221111100
Q ss_pred c-cccccccccccCCC-cchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 653 G-LLGEMYNENEVGSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 653 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
. ......-......+ .........+.+++.+|++.||++|||+.|+
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0 00000000000101 1112244567889999999999999999773
No 283
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.1e-34 Score=331.51 Aligned_cols=236 Identities=15% Similarity=0.168 Sum_probs=184.4
Q ss_pred hcCCchhhhhhcCCCCCccEEEEcC--CCcEEEEEEeeccc--hhHHHHHHHHHHHhccCCCCceeEEEEEEcCCc----
Q 005177 444 RSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 515 (710)
Q Consensus 444 ~~~~~~~~~~ig~g~~g~vy~~~~~--~g~~vAvK~l~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 515 (710)
..|. ..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 80 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYE--VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceE--EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3455 7789999999999999864 68999999986532 335678899999999999999999999988665
Q ss_pred -eeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccc
Q 005177 516 -AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 594 (710)
Q Consensus 516 -~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~ 594 (710)
.|+||||+++|+|.+++...++|.++..|+.|+++||+|||+. +|+||||||+|||++.+ .+||+|||+++....
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 7999999999999999988899999999999999999999998 99999999999999986 899999999986543
Q ss_pred cCCCCcccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHH
Q 005177 595 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (710)
. ....++..|.+||+.... ++.++|||||||++|||++|..|+.+... ... ..........
T Consensus 234 ~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~------~~~~~~~~~~ 294 (681)
T 2pzi_A 234 F--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------DGL------PEDDPVLKTY 294 (681)
T ss_dssp C--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSC------CTTCHHHHHC
T ss_pred C--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------ccc------cccccccccC
Confidence 2 222244557788877654 48899999999999999999877653110 000 0011112233
Q ss_pred HHHHHHHhhcCCCCCCCCCC-HHHHHHHHhc
Q 005177 675 KLVLDVALLCTRSTPSDRPS-MEEALKLLSG 704 (710)
Q Consensus 675 ~~~~~l~~~Cl~~~p~~RPs-~~evl~~L~~ 704 (710)
..+.+++.+|++.||++||+ ++++...|..
T Consensus 295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 56778999999999999995 5555555543
No 284
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-32 Score=290.18 Aligned_cols=288 Identities=23% Similarity=0.275 Sum_probs=254.3
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4778888888886 6777664 789999999999998888899999999999999999999889999999999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc--ccCCccccCCCccchhccccccCCc
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ--GNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~--g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+|+++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99998 5777665 89999999999999777777999999999999999996 4677788888 99999999999986
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
+|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 565554 79999999999999988889999999999999999999988889999999999999999999 78999999
Q ss_pred CCCCcEEeccCCCCCCCCCcccCC------CCCCcEEECCCCcCC--ccCcccccCCCceeeEecccCC
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGR------NSKLRWVDVSTNNFN--GSIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~------~~~L~~L~ls~N~l~--g~ip~~~~~~~~L~~l~l~~N~ 400 (710)
+++|++|++++|++++..+..+.. ..+|+.+++++|.+. +..|..+..++.|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 999999999999999776666654 367899999999987 5667778889999999998875
No 285
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.8e-32 Score=287.24 Aligned_cols=269 Identities=22% Similarity=0.250 Sum_probs=179.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46788888888888766667888888888888888888777888888888888888888877 4565554 67888888
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCC--CCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND--QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
++|.+++..+..|.++++|++|++++|.+.. ..|..+.. +++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~------------------------l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG------------------------MKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGG------------------------CTTCCEEECCSSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccC------------------------CCCcCEEECCCCccc
Confidence 8888877666677778888888888777743 34444444 445555555555554
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccC
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLV 338 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 338 (710)
. +|..+. ++|++|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+.
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 2 333322 56666666666666666666666666666666666666655556666666777777776666 5666666
Q ss_pred CCCCCcEEeccCCCCCCCCCcccCC------CCCCcEEECCCCcCCc--cCcccccCCCceeeEecccCC
Q 005177 339 QLPSLEILFIWNNYFSGSLPENLGR------NSKLRWVDVSTNNFNG--SIPPDICSGGVLFKLILFSNN 400 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g~~p~~l~~------~~~L~~L~ls~N~l~g--~ip~~~~~~~~L~~l~l~~N~ 400 (710)
.+++|++|++++|++++..+..+.. ...++.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 6677777777777766554444432 2567777777777652 334556666777777777764
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.2e-32 Score=289.62 Aligned_cols=302 Identities=21% Similarity=0.317 Sum_probs=256.7
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+.. ++ .+.. +++|++|+|++|.+++. |. +.++++|++|+|++|.+++ +| .+.++++|++|+
T Consensus 45 ~L~~L~l~~~~i~~-~~-~~~~--~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 45 SITKLVVAGEKVAS-IQ-GIEY--LTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TCSEEECCSSCCCC-CT-TGGG--CTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccEEEEeCCcccc-ch-hhhh--cCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 46778888877754 33 3555 89999999999999854 44 8999999999999999986 34 699999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|.+++. |. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 44 8999999999999997765554 48999999999999999876544 8899999999999999875
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccC
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 315 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 315 (710)
..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++. ..+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 433 7889999999999999986554 8889999999999999986544 88899999999999999864 56889
Q ss_pred CCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEe
Q 005177 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395 (710)
Q Consensus 316 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~ 395 (710)
+++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..| +..++.|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 99999999999999864 468889999999999999998888889999999999999999997666 78889999999
Q ss_pred cccCCcc
Q 005177 396 LFSNNFT 402 (710)
Q Consensus 396 l~~N~l~ 402 (710)
+++|.++
T Consensus 340 l~~N~i~ 346 (347)
T 4fmz_A 340 FANQVIK 346 (347)
T ss_dssp SSCC---
T ss_pred hhhhccc
Confidence 9999875
No 287
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.5e-32 Score=300.74 Aligned_cols=301 Identities=26% Similarity=0.349 Sum_probs=183.0
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
+..++++++.+.+..+ +.. +++|++|+|++|.+.+..| +.++++|++|+|++|.+++..+ +.++++|++|++
T Consensus 70 L~~L~Ls~n~l~~~~~--~~~--l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 70 LTQINFSNNQLTDITP--LKN--LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp CCEEECCSSCCCCCGG--GTT--CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred CCEEECCCCccCCchh--hhc--cccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 4445555555443322 333 4555555555555543332 5555555555555555554322 555555555555
Q ss_pred CCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccccc
Q 005177 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
++|.+++ +| .+.++++|++|+++ |.+.+. + .+.++++|+.|++++|.+++. ..+..+++|++|++++|.+.+.
T Consensus 142 ~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 142 SSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 5555543 22 24444444444443 223221 1 266667777777777776543 2366677777777777776655
Q ss_pred CCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCC
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
.| ++.+++|+.|++++|++++. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|++++..+ +..+
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 44 55667777777777776643 346667777777777777765544 6667777777777777775443 6677
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEec
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLIL 396 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l 396 (710)
++|+.|++++|++++..| +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. +.+..+++|+.|++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeC
Confidence 777777777777775433 6667777777777777776554 56677777777777777754 35667777777777
Q ss_pred ccCCcccchh
Q 005177 397 FSNNFTGIVM 406 (710)
Q Consensus 397 ~~N~l~g~i~ 406 (710)
++|++++..|
T Consensus 361 ~~n~l~~~~~ 370 (466)
T 1o6v_A 361 GHNQISDLTP 370 (466)
T ss_dssp CSSCCCBCGG
T ss_pred CCCccCccch
Confidence 7777777665
No 288
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.5e-32 Score=301.46 Aligned_cols=301 Identities=28% Similarity=0.416 Sum_probs=264.0
Q ss_pred CcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEE
Q 005177 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 154 (710)
.....++++.+.+.+..+ +.. +++|++|+|++|.+++..+ +.++++|++|++++|.+++ +| .++.+++|++|
T Consensus 90 ~~L~~L~l~~n~l~~~~~--~~~--l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L 161 (466)
T 1o6v_A 90 TKLVDILMNNNQIADITP--LAN--LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQL 161 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTT--CTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEE
T ss_pred ccCCEEECCCCccccChh--hcC--CCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEe
Confidence 357888999998886544 666 8999999999999986533 8999999999999999986 34 58999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|.+.
T Consensus 162 ~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 162 SFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp EEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 996 5666433 399999999999999999853 358899999999999999988766 788999999999999987
Q ss_pred ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCcccc
Q 005177 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFA 314 (710)
Q Consensus 235 g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 314 (710)
+. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..| +.
T Consensus 235 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 306 (466)
T 1o6v_A 235 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--IS 306 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GG
T ss_pred cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hc
Confidence 63 357889999999999999997655 8899999999999999997554 7889999999999999998655 88
Q ss_pred CCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeE
Q 005177 315 DLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394 (710)
Q Consensus 315 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l 394 (710)
.+++|+.|++++|++++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..++.|+.|
T Consensus 307 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 380 (466)
T 1o6v_A 307 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 380 (466)
T ss_dssp GCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEE
T ss_pred CCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEE
Confidence 99999999999999998766 78999999999999999975 478999999999999999998877 8889999999
Q ss_pred ecccCCcccc
Q 005177 395 ILFSNNFTGI 404 (710)
Q Consensus 395 ~l~~N~l~g~ 404 (710)
++++|.+++.
T Consensus 381 ~l~~n~~~~~ 390 (466)
T 1o6v_A 381 GLNDQAWTNA 390 (466)
T ss_dssp ECCCEEEECC
T ss_pred eccCCcccCC
Confidence 9999999983
No 289
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=8.6e-32 Score=285.29 Aligned_cols=283 Identities=19% Similarity=0.261 Sum_probs=208.4
Q ss_pred CCceeeeeeeCCC---------CCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEE
Q 005177 61 YACSWSGVKCNKN---------NTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLD 131 (710)
Q Consensus 61 ~~C~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 131 (710)
..|.|..+.|... ...++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKN--LKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTT--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhcc--CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 4578999999742 124678999999998876667777 89999999999999988899999999999999
Q ss_pred CcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCC--CCCCcccCCCCCCCeEEecCCcC
Q 005177 132 ISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS--GPIPSQFGSFKSLEFLHLAGNLL 209 (710)
Q Consensus 132 Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l 209 (710)
|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.++ +..+..+.++++|++|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 5666554 89999999999999888888999999999999999996 37788899999999999999998
Q ss_pred CCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccc
Q 005177 210 NDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEF 289 (710)
Q Consensus 210 ~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 289 (710)
+. +|..+. + +|++|++++|++++..|..+..+++|+.|++++|.+++..+..+
T Consensus 184 ~~-l~~~~~--~------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 236 (330)
T 1xku_A 184 TT-IPQGLP--P------------------------SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236 (330)
T ss_dssp CS-CCSSCC--T------------------------TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTG
T ss_pred cc-CCcccc--c------------------------cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhc
Confidence 74 444332 3 45555555555555555556666666666666666665555556
Q ss_pred cCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC------CCCCcEEeccCCCCCC--CCCccc
Q 005177 290 SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ------LPSLEILFIWNNYFSG--SLPENL 361 (710)
Q Consensus 290 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~------l~~L~~L~L~~N~l~g--~~p~~l 361 (710)
..+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..+.. .+.|+.|++++|.+.. ..|..+
T Consensus 237 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f 315 (330)
T 1xku_A 237 ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315 (330)
T ss_dssp GGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGG
T ss_pred cCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccc
Confidence 66666666666666665 45666666666666666666666544444432 3567777777777652 445666
Q ss_pred CCCCCCcEEECCCCc
Q 005177 362 GRNSKLRWVDVSTNN 376 (710)
Q Consensus 362 ~~~~~L~~L~ls~N~ 376 (710)
..+.+++.+++++|+
T Consensus 316 ~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 316 RCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTCCCGGGEEC----
T ss_pred ccccceeEEEecccC
Confidence 667777777777764
No 290
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.8e-32 Score=310.44 Aligned_cols=302 Identities=20% Similarity=0.186 Sum_probs=244.1
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
..+.++|+.+.+++..+..+.. +++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~--L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQS--LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTT--CTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCEEECCCCcCCCcChhHhcC--CCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 4678899999998766666777 89999999999999977777899999999999999999988888899999999999
Q ss_pred CCCCCCCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCC--------------------------------------
Q 005177 156 AFSNSFSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF-------------------------------------- 196 (710)
Q Consensus 156 L~~N~l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l-------------------------------------- 196 (710)
|++|.+++ .+|..++++++|++|+|++|++++..|..|..+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999986 578999999999999999998876544332211
Q ss_pred --------------------------------------------------------------------------------
Q 005177 197 -------------------------------------------------------------------------------- 196 (710)
Q Consensus 197 -------------------------------------------------------------------------------- 196 (710)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred -------------CCCCeEEecCCcCCCCCcc-------------------cccccccccccccccccccc---------
Q 005177 197 -------------KSLEFLHLAGNLLNDQIPA-------------------ELGMLKTVTHMEIGYNFYQG--------- 235 (710)
Q Consensus 197 -------------~~L~~L~L~~N~l~~~~p~-------------------~l~~l~~L~~L~l~~n~~~g--------- 235 (710)
.+|+.|++.+|.+.+..+. ....+++|+.++++.|.+..
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 1222333333322211111 11234455566665554421
Q ss_pred ----------------------------------------cC-CccccCCCccchhccccccCCccCchhccCCCCCcEE
Q 005177 236 ----------------------------------------NI-PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274 (710)
Q Consensus 236 ----------------------------------------~~-p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L 274 (710)
.. +..+..+++++.++++.|.+.+..|..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 11 1234566778888888999998889899999999999
Q ss_pred EccccccC-CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCC
Q 005177 275 FLFRNQLA-GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (710)
Q Consensus 275 ~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l 353 (710)
++++|++. +..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|++
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 99999854 45788899999999999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCCcccCCC-CCCcEEECCCCcCCc
Q 005177 354 SGSLPENLGRN-SKLRWVDVSTNNFNG 379 (710)
Q Consensus 354 ~g~~p~~l~~~-~~L~~L~ls~N~l~g 379 (710)
++..|..+..+ ++|+.|++++|.++.
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999888 689999999999874
No 291
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1e-31 Score=297.02 Aligned_cols=284 Identities=19% Similarity=0.183 Sum_probs=246.7
Q ss_pred CcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccC
Q 005177 92 PGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 171 (710)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~ 171 (710)
+..+.. +++|++|+|++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|++++|.+++. | +++
T Consensus 35 ~~~~~~--l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 35 TISEEQ--LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp EEEHHH--HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccChhH--cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 334555 89999999999999974 6 799999999999999999984 4 89999999999999999974 4 899
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhc
Q 005177 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
+++|++|++++|++++ +| ++.+++|++|++++|.+++. | ++.+++|+.|+++.|...+.+ .++.+++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 9999999999999997 45 89999999999999999984 3 889999999999999877777 478999999999
Q ss_pred cccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcc
Q 005177 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 331 (710)
+++|++++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 99999997 45 88899999999999999975 37889999999999999998 66 8899999999999999998
Q ss_pred cCCcccCCCC-------CCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCccc--------ccCCCceeeEec
Q 005177 332 TVPESLVQLP-------SLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD--------ICSGGVLFKLIL 396 (710)
Q Consensus 332 ~~p~~~~~l~-------~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~--------~~~~~~L~~l~l 396 (710)
..+..+..+. +|+.|++++|.+.|.+| ++.+++|+.|++++|.+.|.+|.. +...+.|+.|++
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L 325 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYL 325 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEEC
Confidence 6555554444 56677777777777776 567899999999999999888853 445678899999
Q ss_pred ccCCcccc
Q 005177 397 FSNNFTGI 404 (710)
Q Consensus 397 ~~N~l~g~ 404 (710)
++|+++|.
T Consensus 326 ~~N~l~~l 333 (457)
T 3bz5_A 326 NNTELTEL 333 (457)
T ss_dssp TTCCCSCC
T ss_pred CCCccccc
Confidence 99999984
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=4.3e-33 Score=304.36 Aligned_cols=231 Identities=19% Similarity=0.125 Sum_probs=169.9
Q ss_pred hhhhhcCCCCCccEEEE-cCCCcEEEEEEeeccc----hhHHHHHHHHHHHhccCC-CCce----------e--------
Q 005177 450 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRH-KNLI----------R-------- 505 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~e~~~l~~l~H-~niv----------~-------- 505 (710)
..+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|+.+++.++| +|.. .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 56789999999999999 5789999999998422 225678999999999987 3211 1
Q ss_pred ---EEEEEEc-----CCceeEEEeecCCCChhhhhh---------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC
Q 005177 506 ---LLGFCYN-----RHQAYLLYDYLPNGNLSEKIR---------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 568 (710)
Q Consensus 506 ---l~g~~~~-----~~~~~lv~Ey~~~gsL~~~l~---------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 568 (710)
+..++.. ....+++|+++ +|+|.+++. ..++|..+..|+.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12457777765 589999884 2356788899999999999999998 9999999
Q ss_pred CCCCeEecCCCceEEcccCccccccccCCCCcccccccCchhhh----------hccCCccccceeeHHHHHHHHHhCCC
Q 005177 569 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFY----------NAMKEEMYMDVYGFGEIILEILTNGR 638 (710)
Q Consensus 569 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~----------~~~~~~~~~DVySfGvvl~Elltg~~ 638 (710)
||+|||++.++.+||+|||+++.......... + ..|.+||+. ....++.++|||||||++|||+||+.
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~-g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPI-G-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCC-C-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCC-C-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999999999999999999886654322222 3 557888887 44457889999999999999999999
Q ss_pred CCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 005177 639 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 700 (710)
Q Consensus 639 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~evl~ 700 (710)
||....... ....+.... .. . ...+.+++.+||+.||++||++.|+++
T Consensus 316 Pf~~~~~~~------~~~~~~~~~-~~----~---~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALG------GSEWIFRSC-KN----I---PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGS------CSGGGGSSC-CC----C---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhh------hHHHHHhhc-cc----C---CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 987443211 111111111 11 1 145778889999999999999877754
No 293
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=1.1e-31 Score=291.39 Aligned_cols=284 Identities=20% Similarity=0.183 Sum_probs=247.3
Q ss_pred EEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEEC
Q 005177 77 VVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDA 156 (710)
Q Consensus 77 v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 156 (710)
+..++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|+++++|++|++
T Consensus 71 L~~L~L~~n~i~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 71 VELLNLNDLQIEEIDTYAFAY--AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CSEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcEEECCCCcccccChhhccC--CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 345677777776655556666 899999999999999888888999999999999999999655556799999999999
Q ss_pred CCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccccc
Q 005177 157 FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 157 ~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
++|.+++..|..+.++++|++|++++|.+++. .+..+++|+.|++++|.+++ +....+|+.|++++|.+...
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~ 220 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV 220 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec
Confidence 99999988888999999999999999999864 36778999999999998864 34456899999999998754
Q ss_pred CCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCC
Q 005177 237 IPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 237 ~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
|. ...++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++ +|..+..+
T Consensus 221 -~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l 294 (390)
T 3o6n_A 221 -RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPI 294 (390)
T ss_dssp -EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCC
T ss_pred -cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCC
Confidence 33 2357899999999999864 578999999999999999999889999999999999999999986 67777889
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCcc
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ 380 (710)
++|+.|++++|+++ .+|..+..+++|++|++++|.++.. | +..+++|+.|++++|.+++.
T Consensus 295 ~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 295 PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp TTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 99999999999998 5777888999999999999999854 4 67889999999999999864
No 294
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=6.7e-31 Score=280.31 Aligned_cols=286 Identities=21% Similarity=0.286 Sum_probs=253.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +.++++|++|++++|.++. +| .+.++++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 7899999999999974 55 48899999999999999986544 9999999999999999985 44 699999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
+++|.+++. |. +..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 44 89999999999999977665554 8999999999999999876544 8899999999999999985
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. +.+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 443 8889999999999999987554 7889999999999999987544 89999999999999999863 56889
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchh
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
+++|++|++++|.+++. +.+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..|
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 99999999999999864 458889999999999999999999999999999999999999999776
No 295
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=2.6e-30 Score=285.38 Aligned_cols=288 Identities=23% Similarity=0.301 Sum_probs=154.5
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.+..++++.+.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .++++++|++|+
T Consensus 92 ~L~~L~l~~n~l~~-lp~~-----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 92 HLESLVASCNSLTE-LPEL-----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TCSEEECCSSCCSS-CCCC-----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCEEEccCCcCCc-cccc-----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 35556666666665 4432 3456666666666653 2211 1466666666666664 55 366666666666
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
+++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|.+++ +|... ++|+.|++++|.++
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 66666664 44432 366666666666664 44 46666666666666666654 33322 35666666666665
Q ss_pred cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC--CCCcc-
Q 005177 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG--PIPES- 312 (710)
Q Consensus 236 ~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~- 312 (710)
.+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|+.|++++|++++ .+|..
T Consensus 229 ~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L 299 (454)
T 1jl5_A 229 ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNL 299 (454)
T ss_dssp SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTC
T ss_pred cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcC
Confidence 4553 5666666666666666654 3321 2556666666666654 3322 2455555555555554 22211
Q ss_pred ------------ccCC-CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 313 ------------FADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 313 ------------~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
+..+ ++|+.|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|+.|++++|++++
T Consensus 300 ~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 300 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred CEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCc
Confidence 1112 356666666666664 4443 466677777777666 3554 35667777777777776
Q ss_pred --cCcccccCC-------------CceeeEecccCCccc
Q 005177 380 --SIPPDICSG-------------GVLFKLILFSNNFTG 403 (710)
Q Consensus 380 --~ip~~~~~~-------------~~L~~l~l~~N~l~g 403 (710)
.+|.++..+ ++|+.|++++|+++|
T Consensus 372 l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 372 FPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp CCCCCTTCCEEECCC------------------------
T ss_pred CCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 666666555 566667777776665
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=283.93 Aligned_cols=286 Identities=20% Similarity=0.200 Sum_probs=201.3
Q ss_pred CCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCC
Q 005177 59 KIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS 138 (710)
Q Consensus 59 ~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 138 (710)
...+|.|.|+ |+. ++++++ .+|..+ .+.|++|+|++|.+++..+..|.++++|++|+|++|+++
T Consensus 26 ~~~~C~~~~~-c~~----------~~~~l~-~iP~~~----~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 26 ASLSCDRNGI-CKG----------SSGSLN-SIPSGL----TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp -CCEECTTSE-EEC----------CSTTCS-SCCTTC----CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred cCCCCCCCeE-eeC----------CCCCcc-cccccc----cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC
Confidence 3457899887 754 233343 345443 458999999999999766668999999999999999999
Q ss_pred CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCc-CCCCCccc
Q 005177 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNL-LNDQIPAE 216 (710)
Q Consensus 139 ~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~-l~~~~p~~ 216 (710)
+..|..|+++++|++|+|++|.+++..+..+.++++|++|+|++|++++..+ ..|.++++|++|++++|. +.+..|..
T Consensus 90 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 9888899999999999999999997656669999999999999999985433 478999999999999984 66555667
Q ss_pred ccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCC
Q 005177 217 LGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296 (710)
Q Consensus 217 l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 296 (710)
++.+++|++|++++|.+.+..|..++++++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+..
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~----- 244 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST----- 244 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-----
Confidence 777777777777777777766777777777777777777765333233344666666666666666543332211
Q ss_pred EEEccCCCCCCCCCccccCCCCCCEEEcccccCcc----cCCcccCCCCCCcEEeccCCCCCCCCCcc-cCCCCCCcEEE
Q 005177 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG----TVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVD 371 (710)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-l~~~~~L~~L~ 371 (710)
......++.+++++|.+++ .+|..+..+++|++|++++|+++ .+|.. +..+++|+.|+
T Consensus 245 ----------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~ 307 (353)
T 2z80_A 245 ----------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIW 307 (353)
T ss_dssp ------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ----------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEE
Confidence 1123345555555555544 34556666666666777666666 44444 36666777777
Q ss_pred CCCCcCCccCc
Q 005177 372 VSTNNFNGSIP 382 (710)
Q Consensus 372 ls~N~l~g~ip 382 (710)
+++|.+++..|
T Consensus 308 L~~N~~~~~~~ 318 (353)
T 2z80_A 308 LHTNPWDCSCP 318 (353)
T ss_dssp CCSSCBCCCHH
T ss_pred eeCCCccCcCC
Confidence 77776666544
No 297
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=5.3e-31 Score=290.98 Aligned_cols=291 Identities=21% Similarity=0.262 Sum_probs=146.1
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCC------------------------------
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLT------------------------------ 125 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------------------------------ 125 (710)
++..++++++.+ |.+|++++. +++|++|+|++|.+.|.+|.++++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~--L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAEN--VKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred cchhhhcccCch-hhCChhHhc--ccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 455666777777 677766666 66666666666666666666555544
Q ss_pred ---CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 126 ---SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 126 ---~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
+|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .|+++++|++|
T Consensus 89 ~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 44555555555544 3322 2445555555555443 2211 1467777777777775 66 47777777777
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|++++ +|..+ .+|++|++++|.+++ +| .++++++|++|++++|++++ +|.. .++|++|++++|.++
T Consensus 159 ~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 159 DVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE 228 (454)
T ss_dssp ECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS
T ss_pred ECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC
Confidence 777777764 55433 466777777777765 45 46667777777777776664 3322 135666666666665
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC--CCCcc
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG--SLPEN 360 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~ 360 (710)
.+| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|++++|.+++ .+|..
T Consensus 229 -~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~ 298 (454)
T 1jl5_A 229 -ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPN 298 (454)
T ss_dssp -SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTT
T ss_pred -ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCc
Confidence 444 25556666666666666554 3322 2344445554444443 2321 1334444444444433 22211
Q ss_pred c-------------CCC-CCCcEEECCCCcCCccCcccccCCCceeeEecccCCccc
Q 005177 361 L-------------GRN-SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (710)
Q Consensus 361 l-------------~~~-~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g 403 (710)
+ ... ++|+.|++++|++++ +|.. .+.|+.|++++|++++
T Consensus 299 L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 299 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 1 111 356666666666664 4543 3556666666666653
No 298
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=9.7e-34 Score=315.87 Aligned_cols=229 Identities=18% Similarity=0.181 Sum_probs=108.7
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44444444444444444444444444444444444443333 4444444444444444443211 1444455555
Q ss_pred CCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCC
Q 005177 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
+|.+++..+.. +++|+.|++++|.+++..|..++.+++|+.|+|++|.+++.+
T Consensus 108 ~N~l~~~~~~~---------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 108 NNNISRVSCSR---------------------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp SSCCCCEEECC---------------------------CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred CCcCCCCCccc---------------------------cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 44444322211 122333333333333333333444444444444444444444
Q ss_pred Ccccc-CCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCC
Q 005177 286 PWEFS-RVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (710)
Q Consensus 286 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~ 364 (710)
|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++. |..+..+++|+.|+|++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 43332 34455555555555543311 22355566666666665543 3335556666666666666663 55556666
Q ss_pred CCCcEEECCCCcCC-ccCcccccCCCcee
Q 005177 365 SKLRWVDVSTNNFN-GSIPPDICSGGVLF 392 (710)
Q Consensus 365 ~~L~~L~ls~N~l~-g~ip~~~~~~~~L~ 392 (710)
++|+.|++++|.+. +.+|..+..++.+.
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~ 265 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCc
Confidence 66666677666666 55555554444443
No 299
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2.7e-32 Score=289.84 Aligned_cols=235 Identities=11% Similarity=0.120 Sum_probs=174.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccC---------CCCceeEEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVR---------HKNLIRLLGFCY 511 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~---------H~niv~l~g~~~ 511 (710)
..+.||+|+||.||+|+. +|+.||||++..... ..+.+.+|++++++++ |||||++.+++.
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 678999999999999987 789999999986421 1367888999888875 888888877653
Q ss_pred ------------------------------cCCceeEEEeecCCCChhhhh-hcCCCHHHHHHHHHHHHHHHHHHh-cCC
Q 005177 512 ------------------------------NRHQAYLLYDYLPNGNLSEKI-RTKRDWAAKYKIVLGVARGLCFLH-HDC 559 (710)
Q Consensus 512 ------------------------------~~~~~~lv~Ey~~~gsL~~~l-~~~~~~~~~~~i~~~ia~gL~yLH-~~~ 559 (710)
+++..|+||||+++|++.+.+ ....++.....|+.|++.||+||| +.
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~- 181 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL- 181 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 267899999999999765555 446789999999999999999999 78
Q ss_pred CCCceecCCCCCCeEecCCC--------------------ceEEcccCccccccccCCCCcccccccCchhhhhccCCcc
Q 005177 560 YPAIPHGDLKASNIVFDENM--------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEM 619 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 619 (710)
+|+||||||+|||++.++ .+||+|||+|+..... ...++..|.+||...+.. +.
T Consensus 182 --~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~g~~-~~ 255 (336)
T 2vuw_A 182 --RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFTGDG-DY 255 (336)
T ss_dssp --CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGCCCS-SH
T ss_pred --CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhcCCC-cc
Confidence 999999999999999887 8999999999876422 223445577888877655 88
Q ss_pred ccceeeHHHH-HHHHHhCCCCCCCCCCCCcccccccccccccccccCCCcchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 005177 620 YMDVYGFGEI-ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 698 (710)
Q Consensus 620 ~~DVySfGvv-l~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~p~~RPs~~ev 698 (710)
++||||+|++ .+++.+|..|+.+...... ............. .............+.+++.+|++.| |++|+
T Consensus 256 ~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~ 328 (336)
T 2vuw_A 256 QFDIYRLMKKENNNRWGEYHPYSNVLWLHY-LTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDL 328 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSCCTHHHHHHHHH-HHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHH
T ss_pred ceehhhhhCCCCcccccccCCCcchhhhhH-HHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHhccC-----CHHHH
Confidence 9999998776 7778888888742100000 0000010111111 1112234456678899999999976 99998
Q ss_pred H
Q 005177 699 L 699 (710)
Q Consensus 699 l 699 (710)
+
T Consensus 329 l 329 (336)
T 2vuw_A 329 L 329 (336)
T ss_dssp H
T ss_pred H
Confidence 7
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=8.9e-31 Score=274.36 Aligned_cols=285 Identities=22% Similarity=0.250 Sum_probs=184.5
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCC-
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG- 139 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~- 139 (710)
..|.|.++.|+... +. .+|..+ .+.|++|+|++|.++...+..|.++++|++|+|++|.++.
T Consensus 5 C~C~~~~l~c~~~~------------l~-~ip~~~----~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 67 (306)
T 2z66_A 5 CSCSGTEIRCNSKG------------LT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK 67 (306)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCC----CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE
T ss_pred CeeCCCEEEcCCCC------------cc-cCCCCC----CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc
Confidence 34899999997621 11 233332 3579999999999985444457899999999999999873
Q ss_pred -CCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCeEEecCCcCCCCCcccc
Q 005177 140 -HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAEL 217 (710)
Q Consensus 140 -~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l 217 (710)
..|..+..+++|++|+|++|.++ .+|..+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..|..+
T Consensus 68 ~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 146 (306)
T 2z66_A 68 GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146 (306)
T ss_dssp EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT
T ss_pred cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc
Confidence 34677888999999999999988 477789999999999999999986554 578888999999999988877666666
Q ss_pred cccccccccccccccccc-cCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCC
Q 005177 218 GMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK 296 (710)
Q Consensus 218 ~~l~~L~~L~l~~n~~~g-~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 296 (710)
..+++|+.|++++|.+.+ .+|.. +..+++|++|++++|.+++..|..+..+++|+
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~------------------------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDI------------------------FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSC------------------------CTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCcCCCEEECCCCccccccchhH------------------------HhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 666666666666555544 33444 44445555555555555544444555555555
Q ss_pred EEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCC-CCcEEeccCCCCCCCCCc--ccCCCCCCcEEECC
Q 005177 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP-SLEILFIWNNYFSGSLPE--NLGRNSKLRWVDVS 373 (710)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~--~l~~~~~L~~L~ls 373 (710)
.|++++|++++..+..+..+++|+.|++++|++++..|..+..++ +|++|++++|.+++.-+. ....+...+.+.+.
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~ 282 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVE 282 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSC
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcc
Confidence 555555555544444555555555555555555555555555553 566666666665543210 01111222333444
Q ss_pred CCcCCccCcccccC
Q 005177 374 TNNFNGSIPPDICS 387 (710)
Q Consensus 374 ~N~l~g~ip~~~~~ 387 (710)
.+.+....|+.+.+
T Consensus 283 ~~~~~C~~p~~~~g 296 (306)
T 2z66_A 283 VERMECATPSDKQG 296 (306)
T ss_dssp GGGCBEEESGGGTT
T ss_pred ccccccCCchhhCC
Confidence 55666666665543
No 301
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=4.5e-30 Score=271.56 Aligned_cols=236 Identities=19% Similarity=0.232 Sum_probs=216.9
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
..+++++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4588999999999998 78888999999999999999999 89999999999999999999999 789999999999999
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|.+.+.+|..++.. .++..+.++++|++|++++|+++ .+|..++.+++|++|++++|.++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 999999988888876542 12334677899999999999999 88999999999999999999999
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccC
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~ 362 (710)
+ +|..+..+++|+.|++++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 6 666799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEECCCCcCC
Q 005177 363 RNSKLRWVDVSTNNFN 378 (710)
Q Consensus 363 ~~~~L~~L~ls~N~l~ 378 (710)
.+++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 9999999999987765
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=276.10 Aligned_cols=277 Identities=21% Similarity=0.169 Sum_probs=202.2
Q ss_pred CcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
....|+++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 345888999987 6777665 5899999999999987777899999999999999999988888899999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCc-ccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
|++++..+..|+++++|++|++++|.+++..+ ..+..+++|++|++++|. .+++..
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----------------------~~~~~~ 166 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----------------------TFTKIQ 166 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----------------------SCCEEC
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----------------------cccccC
Confidence 99986555558899999999999998874322 245555555555555552 233333
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCccc---C
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL---V 338 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~---~ 338 (710)
+..+..+++|+.|++++|.+++..|..+..+++|++|++++|++....+..+..+++|+.|++++|++++..+..+ .
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~ 246 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGE 246 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccc
Confidence 3445555555555555555555555555555556666666665543222233445666666666666665443332 2
Q ss_pred CCCCCcEEeccCCCCCC----CCCcccCCCCCCcEEECCCCcCCccCcccc-cCCCceeeEecccCCcccchh
Q 005177 339 QLPSLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDI-CSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g----~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~-~~~~~L~~l~l~~N~l~g~i~ 406 (710)
..+.++.+++++|.+++ .+|..+..+++|+.|++++|+++ .+|..+ ..+++|++|++++|.+++..|
T Consensus 247 ~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 45678899999998886 47888899999999999999999 688775 789999999999999999877
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.5e-30 Score=272.68 Aligned_cols=276 Identities=20% Similarity=0.206 Sum_probs=222.6
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCc--CCchhccCCCCCCEEEcc
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~--~~p~~~~~L~~L~~L~L~ 181 (710)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46788888886 5676553 689999999999986555567899999999999999883 347778889999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.++ .+|..+..+++|++|++++|.+++..+ +..+.++++|++|++++|.+++..
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~-----------------------~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE-----------------------FSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTT-----------------------TTTTTTCTTCCEEECTTSCCEECS
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCccccccc-----------------------chhhhhccCCCEEECCCCcCCccc
Confidence 99887 467778888888888888887764322 023556677888888888888778
Q ss_pred chhccCCCCCcEEEccccccCC-CCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 340 (710)
|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 8888889999999999999987 578889999999999999999999889999999999999999999998777789999
Q ss_pred CCCcEEeccCCCCCCCCCcccCCCC-CCcEEECCCCcCCccCccc--ccCCCceeeEecccCCcccchh
Q 005177 341 PSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNFNGSIPPD--ICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 341 ~~L~~L~L~~N~l~g~~p~~l~~~~-~L~~L~ls~N~l~g~ip~~--~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
++|++|++++|.+++..|..+..++ +|+.|++++|.+++.-+.. .........+....+.+....|
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 9999999999999999999999884 9999999999998753310 1111223334445555555444
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=9.7e-29 Score=273.46 Aligned_cols=227 Identities=22% Similarity=0.246 Sum_probs=157.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999888899999999999999999999988899999999999999999999877778999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcc-cccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA-ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
++|.++...+..|.++++|+.|++++|...+.+|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 99999977777899999999999998554444443 45556666666666655543 22 24444455555555555554
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEM 329 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 329 (710)
..|..|.++++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 4444444455555555555554444444444444444444444444444444444444444444444443
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-30 Score=274.50 Aligned_cols=247 Identities=19% Similarity=0.166 Sum_probs=116.6
Q ss_pred cCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCC-CcCCchhcc-------CCCCCCEEEccCCCCCCCCCccc
Q 005177 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF-SGSVPAEIS-------QLEHLKVLNLAGSYFSGPIPSQF 193 (710)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l-~~~~p~~~~-------~L~~L~~L~L~~n~l~~~~p~~~ 193 (710)
+..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3444555555555555 455544433 55556666655 334555444 56666666666666666566554
Q ss_pred --CCCCCCCeEEecCCcCCCCCccccccc-----ccccccccccccccccCCccccCCCccchhccccccCCcc--Cchh
Q 005177 194 --GSFKSLEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--IPKE 264 (710)
Q Consensus 194 --~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~--~p~~ 264 (710)
..+++|++|+|++|.+++. |..++.+ ++|++|++++|.+.+..|..++++++|++|++++|++.+. +|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5666666666666666554 5444443 3444444444444333333444444444444444444332 1222
Q ss_pred c--cCCCCCcEEEccccccCC--CCC-ccccCCCCCCEEEccCCCCCCCCC-ccccCCCCCCEEEcccccCcccCCcccC
Q 005177 265 L--SNLTKLESLFLFRNQLAG--QVP-WEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEMSGTVPESLV 338 (710)
Q Consensus 265 l--~~l~~L~~L~L~~n~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 338 (710)
+ ..+++|++|++++|.+++ .++ ..+..+++|+.|++++|++++.+| ..+..+++|+.|+|++|+++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 2 444445555555544442 111 122334444455555554444432 22333444444444444444 3444333
Q ss_pred CCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCC
Q 005177 339 QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 339 ~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
++|++|++++|++++. |. +..+++|+.|++++|.++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 4444444444444433 33 444444444444444443
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.4e-28 Score=268.13 Aligned_cols=109 Identities=25% Similarity=0.184 Sum_probs=86.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 46888888888888777778888888888888888888777778888888888888888888666667888888888888
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcC
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLL 209 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 209 (710)
++|.++...+..|.++++|+.|++++|..
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~ 172 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKR 172 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTT
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCC
Confidence 88888766666777778888887777543
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.9e-28 Score=269.65 Aligned_cols=236 Identities=20% Similarity=0.201 Sum_probs=185.9
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCC
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~ 195 (710)
.+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.+
T Consensus 68 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 145 (452)
T 3zyi_A 68 EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 145 (452)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSS
T ss_pred ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcc
Confidence 4555443 68999999999999998999999999999999999999888899999999999999999999877778999
Q ss_pred CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEE
Q 005177 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275 (710)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~ 275 (710)
+++|++|+|++|.++...+..+..+++|+.|+++.|. .+....+..+..+++|++|+
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~-----------------------~l~~i~~~~~~~l~~L~~L~ 202 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELK-----------------------KLEYISEGAFEGLFNLKYLN 202 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT-----------------------TCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCC-----------------------CccccChhhccCCCCCCEEE
Confidence 9999999999998875544455555555555544432 22222223466677777777
Q ss_pred ccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 276 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+++|++++. | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|++++
T Consensus 203 L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 203 LGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp CTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 777777653 3 36677788888888888887778888888888888888888888778888888888888888888887
Q ss_pred CCCcccCCCCCCcEEECCCCcCC
Q 005177 356 SLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 356 ~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
..+..+..+++|+.|++++|.+.
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEE
T ss_pred cChHHhccccCCCEEEccCCCcC
Confidence 66677778888888888888765
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.9e-30 Score=272.58 Aligned_cols=246 Identities=19% Similarity=0.228 Sum_probs=185.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCC-CCCCChhhc-------CCCCCCEEECCCCCCCcCCchhc--
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF-SGHFPGGIQ-------SLRNLLVLDAFSNSFSGSVPAEI-- 169 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~l~-------~L~~L~~L~L~~N~l~~~~p~~~-- 169 (710)
.++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34566677777777 566655543 77777777776 445666555 67777777777777777777665
Q ss_pred cCCCCCCEEEccCCCCCCCCCcccCCC-----CCCCeEEecCCcCCCCCccccccccccccccccccccccc--CCccc-
Q 005177 170 SQLEHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN--IPWQL- 241 (710)
Q Consensus 170 ~~L~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~--~p~~l- 241 (710)
..+++|++|+|++|++++. |..++.+ ++|++|++++|++++..|..++.+++|++|++++|.+.+. +|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 6777777777777777765 6666655 6777777777777766667777777777777777776655 23334
Q ss_pred -cCCCccchhccccccCCc--cCc-hhccCCCCCcEEEccccccCCCCC-ccccCCCCCCEEEccCCCCCCCCCccccCC
Q 005177 242 -GNMSEVQYLDIAGANLSG--SIP-KELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADL 316 (710)
Q Consensus 242 -~~l~~L~~L~ls~n~l~g--~~p-~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 316 (710)
+++++|++|++++|++++ .++ ..+..+++|+.|++++|++++..| ..+..+++|++|++++|+++ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 788889999999999883 233 335678999999999999998775 45667899999999999998 7888776
Q ss_pred CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 317 KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 317 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
++|+.|+|++|++++. |. +..+++|++|++++|++++
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8999999999999976 66 8899999999999999985
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=5.9e-29 Score=257.75 Aligned_cols=207 Identities=23% Similarity=0.245 Sum_probs=131.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L~~L~~L 178 (710)
.+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|. ++...|..+.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4567888888888876666677778888888888888877777777778888888888876 665557777777777777
Q ss_pred EccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
+|++|.+++..|..|.++++|++|++++|.+++..+..++ ++++|++|++++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR------------------------DLGNLTHLFLHGNRIS 166 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc------------------------cCCCccEEECCCCccc
Confidence 7777777776677777777777777777776643333333 3344444444444444
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
+..+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 167 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 333334444555555555555555544555555555555555555555444444555555555555555544
No 310
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=4.4e-28 Score=275.97 Aligned_cols=280 Identities=24% Similarity=0.305 Sum_probs=147.2
Q ss_pred CCCCceeeeeee------CCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEEC
Q 005177 59 KIYACSWSGVKC------NKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDI 132 (710)
Q Consensus 59 ~~~~C~w~gv~C------~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 132 (710)
..+||.|.|..| .+....+..+++++++++ .+|..+ .++|++|+|++|.++ .+|. .+++|++|+|
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l----~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L 88 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL----PAHITTLVIPDNNLT-SLPA---LPPELRTLEV 88 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCC----CTTCSEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhh----CCCCcEEEecCCCCC-CCCC---cCCCCCEEEc
Confidence 456899976532 111123556666666665 555544 246677777777665 3444 4566777777
Q ss_pred cCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC
Q 005177 133 SRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ 212 (710)
Q Consensus 133 s~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (710)
++|++++ +|. .+++|++|+|++|.+++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|.+++
T Consensus 89 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 89 SGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS- 155 (622)
T ss_dssp CSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-
T ss_pred CCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-
Confidence 7776663 443 55666777777766664 333 45666667777666664 4442 3666666666666653
Q ss_pred CcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCC
Q 005177 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRV 292 (710)
Q Consensus 213 ~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 292 (710)
+|. .+.+|+.|++++|.+++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|. .+
T Consensus 156 l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~ 220 (622)
T 3g06_A 156 LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LP 220 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CC
T ss_pred cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CC
Confidence 332 22445555555555543 33 234455555555555543 2221 2445555555555542 222 12
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEEC
Q 005177 293 TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372 (710)
Q Consensus 293 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~l 372 (710)
++|+.|++++|++++ +| ..+++|+.|+|++|+++ .+|. .+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 445555555555543 33 23344555555555554 2333 3344555555555554 44444555555555555
Q ss_pred CCCcCCccCccc
Q 005177 373 STNNFNGSIPPD 384 (710)
Q Consensus 373 s~N~l~g~ip~~ 384 (710)
++|.+++.+|..
T Consensus 292 ~~N~l~~~~~~~ 303 (622)
T 3g06_A 292 EGNPLSERTLQA 303 (622)
T ss_dssp CSCCCCHHHHHH
T ss_pred cCCCCCCcCHHH
Confidence 555555444443
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1e-28 Score=255.93 Aligned_cols=206 Identities=21% Similarity=0.208 Sum_probs=161.6
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC-CCCCCChhhcCCCCCCEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSLRNLLVL 154 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L 154 (710)
.++.++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|. +....|..+..+++|++|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~--~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRA--CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CceEEEeeCCcCCccCHHHccc--CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 5788999999998876666777 8999999999999998889999999999999999997 887778899999999999
Q ss_pred ECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 155 ~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
++++|.+++..|..+.++++|++|+|++|.+++..+..|+.+++|++|++++|.+++..+..+..+++|+.|++++|.+
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l- 189 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV- 189 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC-
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc-
Confidence 9999999998899999999999999999999987777899999999999999998865544455555555555555544
Q ss_pred ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 235 g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 190 -----------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 190 -----------------------AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp -----------------------CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred -----------------------cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 44444445555555555555555554444445555555555555555544
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=264.34 Aligned_cols=243 Identities=21% Similarity=0.253 Sum_probs=215.0
Q ss_pred ECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCC
Q 005177 107 NLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS 186 (710)
Q Consensus 107 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~ 186 (710)
+.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 49 ~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 125 (440)
T 3zyj_A 49 ICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 125 (440)
T ss_dssp ECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS
T ss_pred EeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC
Confidence 33344443 5566554 68999999999999988899999999999999999999888899999999999999999999
Q ss_pred CCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCCccCchhc
Q 005177 187 GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIPKEL 265 (710)
Q Consensus 187 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l 265 (710)
+..+..|.++++|++|+|++|.++...+..+..+++|+.|+++.|...+.++ ..+.++++|++|++++|+++ .+| .+
T Consensus 126 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~ 203 (440)
T 3zyj_A 126 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NL 203 (440)
T ss_dssp SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CC
T ss_pred eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-cc
Confidence 7777789999999999999999998777789999999999999965555555 46889999999999999998 455 48
Q ss_pred cCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcE
Q 005177 266 SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEI 345 (710)
Q Consensus 266 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 345 (710)
..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 283 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCE
Confidence 88999999999999999988999999999999999999999988999999999999999999999877788899999999
Q ss_pred EeccCCCCC
Q 005177 346 LFIWNNYFS 354 (710)
Q Consensus 346 L~L~~N~l~ 354 (710)
|+|++|.+.
T Consensus 284 L~L~~Np~~ 292 (440)
T 3zyj_A 284 IHLHHNPWN 292 (440)
T ss_dssp EECCSSCEE
T ss_pred EEcCCCCcc
Confidence 999999875
No 313
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=2.3e-31 Score=295.20 Aligned_cols=326 Identities=17% Similarity=0.177 Sum_probs=186.0
Q ss_pred cEEEEEcCCCCCcccCCcc-hhhhcCCCCcEEECCCCcCcc----cCCccccCCCCCcEEECcCCCCCCCCChhh-cCCC
Q 005177 76 IVVGINLSMKGLSGALPGK-PLRIFFNELVDLNLSHNSFSG----QFPVEIFNLTSLISLDISRNNFSGHFPGGI-QSLR 149 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~-~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~L~ 149 (710)
+++.++++++.++...... +.. +++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~--~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPL--LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHH--HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred cceehhhhhcccCchhHHHHHhh--cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 3556666666665432222 222 5667777777777653 345556666777777777776655433333 2344
Q ss_pred ----CCCEEECCCCCCCc----CCchhccCCCCCCEEEccCCCCCCCCCccc-----CCCCCCCeEEecCCcCCCC----
Q 005177 150 ----NLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGPIPSQF-----GSFKSLEFLHLAGNLLNDQ---- 212 (710)
Q Consensus 150 ----~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~---- 212 (710)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+..+ ...++|++|++++|.+++.
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 57777777777663 446666777777777777776654322222 2245677777777766653
Q ss_pred CcccccccccccccccccccccccCCcccc-----CCCccchhccccccCCcc----CchhccCCCCCcEEEccccccCC
Q 005177 213 IPAELGMLKTVTHMEIGYNFYQGNIPWQLG-----NMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAG 283 (710)
Q Consensus 213 ~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~-----~l~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~ 283 (710)
++..+..+++|++|++++|.+....+..+. ..++|++|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 244455566677777777666543333222 244666677777666643 45555566666777776666654
Q ss_pred CC-----CccccCCCCCCEEEccCCCCCCC----CCccccCCCCCCEEEcccccCcccCCcccC-----CCCCCcEEecc
Q 005177 284 QV-----PWEFSRVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGTVPESLV-----QLPSLEILFIW 349 (710)
Q Consensus 284 ~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~L~ 349 (710)
.. +..+..+++|++|++++|+++.. ++..+..+++|+.|++++|.+++..+..+. ..++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 21 11222456666666666666543 455555666666666666666543332222 12466666666
Q ss_pred CCCCCCC----CCcccCCCCCCcEEECCCCcCCccCcccccC-----CCceeeEecccCCccc
Q 005177 350 NNYFSGS----LPENLGRNSKLRWVDVSTNNFNGSIPPDICS-----GGVLFKLILFSNNFTG 403 (710)
Q Consensus 350 ~N~l~g~----~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~-----~~~L~~l~l~~N~l~g 403 (710)
+|.+++. +|..+..+++|+.|++++|.+++..+..++. .+.|++|++++|.+++
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6666543 3444555566666666666665544443332 4466666666666654
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.9e-30 Score=269.02 Aligned_cols=169 Identities=21% Similarity=0.169 Sum_probs=76.6
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344444554443333333344555555555555555555555555555555555555554333 555555555555555
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
++++. | ..++|++|++++|.+++..+.. +++|+.|++++|.+++..|..++.+++|++|++++|++++..+.
T Consensus 91 ~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred ccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 55432 1 2255555555555554332221 22333333333333333333333334444444444444433333
Q ss_pred hc-cCCCCCcEEEccccccC
Q 005177 264 EL-SNLTKLESLFLFRNQLA 282 (710)
Q Consensus 264 ~l-~~l~~L~~L~L~~n~l~ 282 (710)
.+ ..+++|++|++++|.++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCC
T ss_pred HHhhccCcCCEEECCCCcCc
Confidence 32 13344444444444443
No 315
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=5.6e-31 Score=292.09 Aligned_cols=327 Identities=17% Similarity=0.145 Sum_probs=261.6
Q ss_pred cEEEEEcCCCCCcc----cCCcchhhhcCCCCcEEECCCCcCcccCCcccc-CCC----CCcEEECcCCCCCC----CCC
Q 005177 76 IVVGINLSMKGLSG----ALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLT----SLISLDISRNNFSG----HFP 142 (710)
Q Consensus 76 ~v~~l~l~~~~l~g----~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~----~L~~L~Ls~N~l~~----~~p 142 (710)
.+..++++++++.+ .++..+.. +++|++|+|++|.+.+..+..+. .++ +|++|+|++|+++. .+|
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~--~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 106 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRV--NPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 106 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHT--CTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHh--CCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHH
Confidence 46778888888874 34444555 78999999999999865554444 355 79999999999984 568
Q ss_pred hhhcCCCCCCEEECCCCCCCcCCchhcc-----CCCCCCEEEccCCCCCCC----CCcccCCCCCCCeEEecCCcCCCCC
Q 005177 143 GGIQSLRNLLVLDAFSNSFSGSVPAEIS-----QLEHLKVLNLAGSYFSGP----IPSQFGSFKSLEFLHLAGNLLNDQI 213 (710)
Q Consensus 143 ~~l~~L~~L~~L~L~~N~l~~~~p~~~~-----~L~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (710)
..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|.+++. ++..+..+++|+.|++++|.+++..
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 186 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAG 186 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHH
Confidence 8899999999999999999865444433 367899999999999864 3566777899999999999987654
Q ss_pred cccccc-----ccccccccccccccccc----CCccccCCCccchhccccccCCccC-----chhccCCCCCcEEEcccc
Q 005177 214 PAELGM-----LKTVTHMEIGYNFYQGN----IPWQLGNMSEVQYLDIAGANLSGSI-----PKELSNLTKLESLFLFRN 279 (710)
Q Consensus 214 p~~l~~-----l~~L~~L~l~~n~~~g~----~p~~l~~l~~L~~L~ls~n~l~g~~-----p~~l~~l~~L~~L~L~~n 279 (710)
+..+.. .++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|++|++++|
T Consensus 187 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n 266 (461)
T 1z7x_W 187 VRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266 (461)
T ss_dssp HHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCC
Confidence 544432 56999999999998864 5777888999999999999987542 223346899999999999
Q ss_pred ccCCC----CCccccCCCCCCEEEccCCCCCCCCCccccC-----CCCCCEEEcccccCccc----CCcccCCCCCCcEE
Q 005177 280 QLAGQ----VPWEFSRVTTLKSLDLSDNRLSGPIPESFAD-----LKNLRLLSLMYNEMSGT----VPESLVQLPSLEIL 346 (710)
Q Consensus 280 ~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L 346 (710)
.+++. ++..+..+++|++|++++|.+.+..+..+.. .++|+.|++++|.+++. ++..+..+++|++|
T Consensus 267 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 346 (461)
T 1z7x_W 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLEL 346 (461)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEE
T ss_pred CCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEE
Confidence 99864 5667778999999999999987654444433 36999999999999875 56777788999999
Q ss_pred eccCCCCCCCCCcccCC-----CCCCcEEECCCCcCCc----cCcccccCCCceeeEecccCCcccc
Q 005177 347 FIWNNYFSGSLPENLGR-----NSKLRWVDVSTNNFNG----SIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 347 ~L~~N~l~g~~p~~l~~-----~~~L~~L~ls~N~l~g----~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
++++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++|++|++++|++++.
T Consensus 347 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 347 QISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred EccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 99999988654444432 6799999999999996 7898888899999999999999875
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.5e-29 Score=262.79 Aligned_cols=258 Identities=16% Similarity=0.140 Sum_probs=176.9
Q ss_pred CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEec
Q 005177 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (710)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (710)
+++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667888888876666667778899999999999998888899999999999999999987654 8999999999999
Q ss_pred CCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCC
Q 005177 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
+|.+++. ...++|++|++++|.+++..+. .+++|+.|++++|++++..+..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9988742 2336777777777776654433 2455666677777666655556666666666666666666655
Q ss_pred Cccc-cCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCC
Q 005177 286 PWEF-SRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN 364 (710)
Q Consensus 286 p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~ 364 (710)
+..+ ..+++|++|++++|++++. | ....+++|+.|+|++|++++ +|..+..+++|++|++++|.++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 5444 3566666666666666643 2 22235666666666666664 3344666666666666666666 355556666
Q ss_pred CCCcEEECCCCcCC-ccCcccccCCCceeeEecc
Q 005177 365 SKLRWVDVSTNNFN-GSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 365 ~~L~~L~ls~N~l~-g~ip~~~~~~~~L~~l~l~ 397 (710)
++|+.|++++|.++ +.+|..+..++.|+.+++.
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 66666666666666 5555555555555555544
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-28 Score=272.14 Aligned_cols=236 Identities=20% Similarity=0.161 Sum_probs=168.2
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| ++.+++|++|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 4489999999999999888899999999999999999998776 999999999999999998633 238999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCcccc-CCCccchhccccccCC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLS 258 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~-~l~~L~~L~ls~n~l~ 258 (710)
|++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|+.|++++|.+++.+|..+. .+++|+.|++++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976654 468899999999999988887777777777777777777666665554 5666666666666665
Q ss_pred ccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc-ccCCccc
Q 005177 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESL 337 (710)
Q Consensus 259 g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~ 337 (710)
+..+ ...+++|+.|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.++
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 4421 2235555566665555554332 35555555555555555553 4445555555555555555554 4444555
Q ss_pred CCCCCCcEEecc
Q 005177 338 VQLPSLEILFIW 349 (710)
Q Consensus 338 ~~l~~L~~L~L~ 349 (710)
..++.|+.++++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 555555554443
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=3.5e-26 Score=260.31 Aligned_cols=268 Identities=22% Similarity=0.262 Sum_probs=228.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
..++.|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|++++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 46999999999998 7888776 89999999999998 4665 68999999999999984 666 7899999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
++|++++ +|. .+++|+.|++++|.+++ +|.. +++|++|++++|.+++ +|. .+++|+.|++++|++++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-
Confidence 9999986 555 67899999999999985 6654 4899999999999885 454 34678999999999985
Q ss_pred CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCC
Q 005177 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 340 (710)
+| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. +|.. +++|+.|+|++|++++ +| ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 55 457899999999999986 4433 4789999999999984 5543 4789999999999996 66 556
Q ss_pred CCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecccCCcccchhHHHHHH
Q 005177 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGIVMFIAAAL 412 (710)
Q Consensus 341 ~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~~N~l~g~i~~~~~~~ 412 (710)
++|+.|++++|.++ .+|. .+++|+.|++++|+++ .+|..+..+++|+.|++++|.+++.+|-.+.-+
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 89999999999999 5676 5688999999999999 889999999999999999999999887655433
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3.4e-26 Score=235.03 Aligned_cols=144 Identities=25% Similarity=0.275 Sum_probs=76.7
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
+.|.|.|+.|... ..+..++++++++.. +|..+ .+.|++|+|++|.+++..+..|.++++|++|+|++|.++..
T Consensus 3 ~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 3 ALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNI----PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCC----CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred ccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCC----CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 6899999999762 223345555555542 33332 23455555555555544444555555555555555555544
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCC
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (710)
.+..|.++++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|++++|.++
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 146 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC
Confidence 4444455555555555555555444444455555555555555555444444455555555555554443
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.7e-28 Score=277.47 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=124.1
Q ss_pred hcCCCCCccEEEE-cCCCcEEEEEEeeccc-----------hhHHHHHHHHHHHhcc-CCCCceeEEEEEEcCCceeEEE
Q 005177 454 AARPQSAAGCKAV-LPTGITVSVKKIEWGA-----------TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 454 ig~g~~g~vy~~~-~~~g~~vAvK~l~~~~-----------~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 520 (710)
...|.+|.++++. ...|+.+|||.+.... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3445555444433 3568899999997531 1246799999999999 6999999999999999999999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCc
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 600 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 600 (710)
||++||+|.++|........ .+|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||+|+..........
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~-~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDR-EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCH-HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred ecCCCCcHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 99999999999987443333 36899999999999999 999999999999999999999999999987653322221
Q ss_pred --ccccccCchhhhhccCCccccceeeHHHHHHHHHhCCCC
Q 005177 601 --AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639 (710)
Q Consensus 601 --~~~~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p 639 (710)
.++++|++||...+ .+..++|+||.|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 14555777887754 456679999999998888766444
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.1e-25 Score=229.89 Aligned_cols=205 Identities=25% Similarity=0.269 Sum_probs=130.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36888899988888776668888888888888888888777778888888888888888888777778888888888888
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCC-CcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
++|.+++..+..++++++|++|++++|.+++. +|..++.+++ |++|++++|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~------------------------L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN------------------------LEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTT------------------------CCEEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCC------------------------CCEEECCCCCCCc
Confidence 88888876666788888888888888877642 3444444444 4444444444443
Q ss_pred cCchhccCCCCCc----EEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 260 SIPKELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 260 ~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
..+..+..+++|+ .|++++|.+++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|.+.
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 3333333333333 4455555544333322222 24444555544444433333444444444444444444
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.9e-25 Score=228.75 Aligned_cols=211 Identities=23% Similarity=0.251 Sum_probs=171.9
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEE
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 155 (710)
.++.++++++.+.+..+..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTT--CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CccEEECCCCcccccCHhHhcc--ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 4788999999998776667777 89999999999999987777899999999999999999998889999999999999
Q ss_pred CCCCCCCcCCchhccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccccc
Q 005177 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
+++|.+++..+..+.++++|++|+|++|.+++ .+|..|.++++|+.|++++|.+++..+..+..+.+|+.+.+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l------ 180 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL------ 180 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE------
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce------
Confidence 99999998777789999999999999999987 46999999999999999999998877776666655552211
Q ss_pred ccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCC
Q 005177 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI 309 (710)
Q Consensus 235 g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 309 (710)
.|++++|.+++..+..+. ..+|+.|++++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 181 --------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 181 --------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp --------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred --------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 456666666644443333 346777777777777665556677777777888777776543
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=5.4e-25 Score=226.26 Aligned_cols=227 Identities=26% Similarity=0.310 Sum_probs=133.0
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
++..+++..+.+.... .+..+++|+.|++++|.++. ++ .+..+++|++|++++|.+++ + +.+.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 3445556666554332 34566677777777777653 22 46667777777777777765 2 356677777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.+++..|..|.++++|++|++++|.+++..|..++.+ ++|++|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l------------------------~~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKL------------------------TNLTYLNLAHNQLQSLP 149 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC------------------------TTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccC------------------------CCCCEEECCCCccCccC
Confidence 777776666666777777777777776665444333333 34444444444444444
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 341 (710)
+..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+. ++
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~ 222 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CP 222 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TT
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------Cc
Confidence 44445555555555555555554444455555666666666666655555556666666666666655432 34
Q ss_pred CCcEEeccCCCCCCCCCcccCCCC
Q 005177 342 SLEILFIWNNYFSGSLPENLGRNS 365 (710)
Q Consensus 342 ~L~~L~L~~N~l~g~~p~~l~~~~ 365 (710)
+|+.|+++.|.++|.+|.+++.+.
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHHHHHHHhCCCcccCcccccC
Confidence 566666666666666666655543
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.4e-24 Score=223.27 Aligned_cols=208 Identities=23% Similarity=0.278 Sum_probs=170.8
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
++.|+.|++++|.+.. ++ .+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 7899999999999873 33 588999999999999999873 4789999999999999999988888899999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++..|..|+++++|++|++++|.+++..|..++ ++++|+.|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD------------------------KLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc------------------------cCccCCEEECCCCCcCc
Confidence 999999988888899999999999999998865444343 45556666666666666
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 6666667777888888888888877776777888888888888877654 446888888888888888888877
Q ss_pred CCC
Q 005177 340 LPS 342 (710)
Q Consensus 340 l~~ 342 (710)
++.
T Consensus 245 ~~~ 247 (272)
T 3rfs_A 245 VAP 247 (272)
T ss_dssp BCG
T ss_pred cCC
Confidence 654
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=2.1e-24 Score=226.37 Aligned_cols=227 Identities=22% Similarity=0.203 Sum_probs=160.2
Q ss_pred CCCcEEECCCCcCcccCCc---cccCCCCCcEEECcCCCCCCCCChhh--cCCCCCCEEECCCCCCCcCCc----hhccC
Q 005177 101 NELVDLNLSHNSFSGQFPV---EIFNLTSLISLDISRNNFSGHFPGGI--QSLRNLLVLDAFSNSFSGSVP----AEISQ 171 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~l--~~L~~L~~L~L~~N~l~~~~p----~~~~~ 171 (710)
..++.|++.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3567777777776532111 12345668888888888888777777 778888888888888876554 34456
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC--CcccccccccccccccccccccccCCccccCCCccch
Q 005177 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ--IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQY 249 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~ 249 (710)
+++|++|+|++|.+++..|..|+++++|++|+|++|++.+. ++. +..++.+++|++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------------~~~~~~l~~L~~ 201 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMA----------------------ALCPHKFPAIQN 201 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHT----------------------TSCTTSSCCCCS
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhH----------------------HHhhhcCCCCCE
Confidence 77888888888888777777777788888888887776532 111 112345666777
Q ss_pred hccccccCCccCch----hccCCCCCcEEEccccccCCCCCccccCC---CCCCEEEccCCCCCCCCCccccCCCCCCEE
Q 005177 250 LDIAGANLSGSIPK----ELSNLTKLESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSDNRLSGPIPESFADLKNLRLL 322 (710)
Q Consensus 250 L~ls~n~l~g~~p~----~l~~l~~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 322 (710)
|++++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|
T Consensus 202 L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L 277 (310)
T 4glp_A 202 LALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVL 277 (310)
T ss_dssp CBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCE
T ss_pred EECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEE
Confidence 7777777752 222 24667888888888888887777666665 58888888888888 5676664 788899
Q ss_pred EcccccCcccCCcccCCCCCCcEEeccCCCCCC
Q 005177 323 SLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 323 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+|++|++++. |. +..+++|+.|++++|+++.
T Consensus 278 ~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 278 DLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp ECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred ECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 9999988863 43 6778889999999998874
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.4e-23 Score=213.71 Aligned_cols=109 Identities=18% Similarity=0.195 Sum_probs=76.1
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
..+.+++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677888888876 4665543 567788888887776666677777777777777777775545556777777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQI 213 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (710)
+|.+++..+..|.++++|++|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 125 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLP 125 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeC
Confidence 77777655556666777777777766665433
No 327
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=4.9e-26 Score=241.41 Aligned_cols=237 Identities=17% Similarity=0.220 Sum_probs=133.3
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
.|.+|.++.|+. ..+..++++.+.+.. ..+.....+.++.|++++|.+.+..|. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~--~~~~~l~l~~~~~~~---~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE--SLWQTLDLTGKNLHP---DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS--TTSSEEECTTCBCCH---HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc--hhheeeccccccCCH---HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 456899998874 335566776665552 223331125677777777777655443 45667777777777776654
Q ss_pred -CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC-CCCCC-CCcccCCCCCCCeEEecCC-cCCCC-Ccc
Q 005177 141 -FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS-YFSGP-IPSQFGSFKSLEFLHLAGN-LLNDQ-IPA 215 (710)
Q Consensus 141 -~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~ 215 (710)
+|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 6666666777777777777766666666666777777777766 45532 4444555666666666666 55432 222
Q ss_pred cccccccccccccccccccccCCccccCCC-ccchhccccc--cCC-ccCchhccCCCCCcEEEccccc-cCCCCCcccc
Q 005177 216 ELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGA--NLS-GSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFS 290 (710)
Q Consensus 216 ~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~-~L~~L~ls~n--~l~-g~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~~~ 290 (710)
. +..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+.
T Consensus 189 ~------------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 189 A------------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp H------------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred H------------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 2 33334 4444444444 233 3344444555555555555555 4444444555
Q ss_pred CCCCCCEEEccCCC-CCCCCCccccCCCCCCEEEcccc
Q 005177 291 RVTTLKSLDLSDNR-LSGPIPESFADLKNLRLLSLMYN 327 (710)
Q Consensus 291 ~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N 327 (710)
.+++|++|++++|. +.......++.+++|+.|++++|
T Consensus 245 ~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 55555555555553 11111113445555555555555
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.3e-23 Score=215.99 Aligned_cols=84 Identities=19% Similarity=0.249 Sum_probs=39.3
Q ss_pred ccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCC
Q 005177 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 200 (710)
+.++++|+++++++|+++ .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|.+++..+ .+.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 344455555555555554 2333322 345555555555554444455555555555555555543211 13444444
Q ss_pred eEEecCCcC
Q 005177 201 FLHLAGNLL 209 (710)
Q Consensus 201 ~L~L~~N~l 209 (710)
+|++++|.+
T Consensus 81 ~L~Ls~N~l 89 (290)
T 1p9a_G 81 TLDLSHNQL 89 (290)
T ss_dssp EEECCSSCC
T ss_pred EEECCCCcC
Confidence 444444444
No 329
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.1e-25 Score=241.34 Aligned_cols=251 Identities=21% Similarity=0.210 Sum_probs=139.6
Q ss_pred EECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC----hhhcCCC-CCCEEECCCCCCCcCCchhccCC-----CCC
Q 005177 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLR-NLLVLDAFSNSFSGSVPAEISQL-----EHL 175 (710)
Q Consensus 106 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~L-----~~L 175 (710)
++|++|.++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555555555555544444456666666665555444 4455555 56666666665555545444443 556
Q ss_pred CEEEccCCCCCCCCCcccC----CC-CCCCeEEecCCcCCCCCcccccc-----ccccccccccccccccc----CCccc
Q 005177 176 KVLNLAGSYFSGPIPSQFG----SF-KSLEFLHLAGNLLNDQIPAELGM-----LKTVTHMEIGYNFYQGN----IPWQL 241 (710)
Q Consensus 176 ~~L~L~~n~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~l~~n~~~g~----~p~~l 241 (710)
++|+|++|.+++..+..+. .+ ++|++|+|++|.+++..+..+.. .++|++|++++|.++.. ++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 6666666655544443222 22 55666666666555444433222 13555555555555432 22223
Q ss_pred cCCC-ccchhccccccCCccCchhcc----CC-CCCcEEEccccccCCC----CCccccC-CCCCCEEEccCCCCCCCCC
Q 005177 242 GNMS-EVQYLDIAGANLSGSIPKELS----NL-TKLESLFLFRNQLAGQ----VPWEFSR-VTTLKSLDLSDNRLSGPIP 310 (710)
Q Consensus 242 ~~l~-~L~~L~ls~n~l~g~~p~~l~----~l-~~L~~L~L~~n~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p 310 (710)
..++ +|++|++++|++++..+..+. .+ ++|++|+|++|.+++. ++..+.. .++|+.|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 3443 677777777777665554333 33 4777777777777653 2333433 3477777777777776443
Q ss_pred ----ccccCCCCCCEEEcccccCccc-------CCcccCCCCCCcEEeccCCCCCCC
Q 005177 311 ----ESFADLKNLRLLSLMYNEMSGT-------VPESLVQLPSLEILFIWNNYFSGS 356 (710)
Q Consensus 311 ----~~~~~l~~L~~L~Ls~N~l~g~-------~p~~~~~l~~L~~L~L~~N~l~g~ 356 (710)
..+..+++|+.|+|++|.+.+. ++..+..+++|+.|++++|.+.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3345567777777777774322 233556667777777777776644
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.6e-23 Score=212.58 Aligned_cols=143 Identities=20% Similarity=0.254 Sum_probs=84.5
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
+||.|.|++|.... ..++++++++. .+|..+ .+.++.|+|++|.+++..|..|.++++|++|+|++|.+++.
T Consensus 3 ~Cp~~~gC~C~~~~---~~l~~~~~~l~-~~p~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 74 (251)
T 3m19_A 3 TCETVTGCTCNEGK---KEVDCQGKSLD-SVPSGI----PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74 (251)
T ss_dssp -CHHHHSSEEEGGG---TEEECTTCCCS-SCCSCC----CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC
T ss_pred cCCCCCceEcCCCC---eEEecCCCCcc-ccCCCC----CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc
Confidence 47899999996411 23455555554 233332 23566666666666665555566666666666666666665
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
.|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++
T Consensus 75 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 55556666666666666666665555555666666666666666665444445555555555555555543
No 331
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=5.7e-26 Score=245.90 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=164.7
Q ss_pred cCCccccCCCCCcEEECcCCCCCCCCCh----hhcCCCCCCEEECCCC---CCCcCCchhc-------cCCCCCCEEEcc
Q 005177 116 QFPVEIFNLTSLISLDISRNNFSGHFPG----GIQSLRNLLVLDAFSN---SFSGSVPAEI-------SQLEHLKVLNLA 181 (710)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~L~~L~~L~L~~N---~l~~~~p~~~-------~~L~~L~~L~L~ 181 (710)
.++..+..+++|++|+|++|.+++..+. .+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3445555666666666666666554332 2445666666666664 3444455444 566777777777
Q ss_pred CCCCCC----CCCcccCCCCCCCeEEecCCcCCCCCcccccc-cccccccccccccccccCCccccCCCccchhcccccc
Q 005177 182 GSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM-LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN 256 (710)
Q Consensus 182 ~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~ 256 (710)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+.. +..+ ..|.+.+ ..++|++|++++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l-----~~~~~~~-------~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL-----AVNKKAK-------NAPPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH-----HHHHHHH-------TCCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH-----hhhhhcc-------cCCCCcEEECCCCC
Confidence 777665 35556666667777777776664332222221 1000 0111111 11566677777777
Q ss_pred CC-ccCc---hhccCCCCCcEEEccccccC--C---CCCccccCCCCCCEEEccCCCCC----CCCCccccCCCCCCEEE
Q 005177 257 LS-GSIP---KELSNLTKLESLFLFRNQLA--G---QVPWEFSRVTTLKSLDLSDNRLS----GPIPESFADLKNLRLLS 323 (710)
Q Consensus 257 l~-g~~p---~~l~~l~~L~~L~L~~n~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~ 323 (710)
++ +.+| ..+..+++|++|++++|.++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 65 3344 35666778888888888776 2 23436677888888888888885 56777888888888888
Q ss_pred cccccCccc----CCccc--CCCCCCcEEeccCCCCCC----CCCccc-CCCCCCcEEECCCCcCCccCc
Q 005177 324 LMYNEMSGT----VPESL--VQLPSLEILFIWNNYFSG----SLPENL-GRNSKLRWVDVSTNNFNGSIP 382 (710)
Q Consensus 324 Ls~N~l~g~----~p~~~--~~l~~L~~L~L~~N~l~g----~~p~~l-~~~~~L~~L~ls~N~l~g~ip 382 (710)
|++|.+++. +|..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|.+++..|
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 888888765 56666 348889999999999887 477777 567899999999999987664
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=8.3e-23 Score=211.80 Aligned_cols=203 Identities=19% Similarity=0.231 Sum_probs=120.2
Q ss_pred hcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccccc
Q 005177 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT 224 (710)
Q Consensus 145 l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 224 (710)
++++++|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++. |.
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~--------- 72 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV--------- 72 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC---------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC---------
Confidence 556677777777777776 4555443 5677777777777766666677777777777777666531 11
Q ss_pred ccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCC
Q 005177 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304 (710)
Q Consensus 225 ~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (710)
.+.+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 73 ----------------~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 73 ----------------DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp ----------------CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred ----------------CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 133445555555555555 445555556666666666666665555555566666666666666
Q ss_pred CCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCC
Q 005177 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (710)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~ 378 (710)
+++..+..|..+++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+....+|+.+++++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 66555555555666666666666665443344455566666666666655 45555555555555555555543
No 333
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=8.3e-26 Score=244.61 Aligned_cols=257 Identities=17% Similarity=0.171 Sum_probs=191.8
Q ss_pred CCChhhcCCCCCCEEECCCCCCCcCCc----hhccCCCCCCEEEccCC---CCCCCCCccc-------CCCCCCCeEEec
Q 005177 140 HFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLEHLKVLNLAGS---YFSGPIPSQF-------GSFKSLEFLHLA 205 (710)
Q Consensus 140 ~~p~~l~~L~~L~~L~L~~N~l~~~~p----~~~~~L~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~L~ 205 (710)
.++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 567778889999999999999887644 44678999999999985 4555666555 677888888888
Q ss_pred CCcCCC----CCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEcccccc
Q 005177 206 GNLLND----QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQL 281 (710)
Q Consensus 206 ~N~l~~----~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l 281 (710)
+|.+++ .+|..+..+++|++|++++|.+++..+..+... |.. +..+++.+ ..++|++|++++|++
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~--l~~~~~~~-------~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQE--LAVNKKAK-------NAPPLRSIICGRNRL 171 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHH--HHHHHHHH-------TCCCCCEEECCSSCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHH--Hhhhhhcc-------cCCCCcEEECCCCCC
Confidence 888776 355555555555555555554432222111110 000 00111111 118999999999999
Q ss_pred C-CCCC---ccccCCCCCCEEEccCCCCC--C---CCCccccCCCCCCEEEcccccCc----ccCCcccCCCCCCcEEec
Q 005177 282 A-GQVP---WEFSRVTTLKSLDLSDNRLS--G---PIPESFADLKNLRLLSLMYNEMS----GTVPESLVQLPSLEILFI 348 (710)
Q Consensus 282 ~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~L 348 (710)
+ +.+| ..+..+++|++|++++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 7 4455 45678899999999999997 3 34558899999999999999996 678889999999999999
Q ss_pred cCCCCCCC----CCccc--CCCCCCcEEECCCCcCCc----cCcccc-cCCCceeeEecccCCcccchhH
Q 005177 349 WNNYFSGS----LPENL--GRNSKLRWVDVSTNNFNG----SIPPDI-CSGGVLFKLILFSNNFTGIVMF 407 (710)
Q Consensus 349 ~~N~l~g~----~p~~l--~~~~~L~~L~ls~N~l~g----~ip~~~-~~~~~L~~l~l~~N~l~g~i~~ 407 (710)
++|.+++. +|..+ +.+++|+.|++++|.+++ .+|..+ .++++|++|++++|.+++..+.
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~ 321 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDV 321 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHH
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhH
Confidence 99999865 56666 448999999999999998 588888 5579999999999999998763
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=220.96 Aligned_cols=225 Identities=17% Similarity=0.138 Sum_probs=160.0
Q ss_pred CCCcEEECcCCCCCCCCCh---hhcCCCCCCEEECCCCCCCcCCchhc--cCCCCCCEEEccCCCCCCCCC----cccCC
Q 005177 125 TSLISLDISRNNFSGHFPG---GIQSLRNLLVLDAFSNSFSGSVPAEI--SQLEHLKVLNLAGSYFSGPIP----SQFGS 195 (710)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~---~l~~L~~L~~L~L~~N~l~~~~p~~~--~~L~~L~~L~L~~n~l~~~~p----~~~~~ 195 (710)
..++.|.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3467777777665421100 11234557777777777766666666 666667777777776665444 23345
Q ss_pred CCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc--C--chhccCCCCC
Q 005177 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--I--PKELSNLTKL 271 (710)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~--~--p~~l~~l~~L 271 (710)
+++|++|+|++|.+.+.. |..++++++|++|++++|++.+. + +..+..+++|
T Consensus 144 ~~~L~~L~Ls~n~l~~~~------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFS------------------------CEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAI 199 (310)
T ss_dssp CSCCCEEEEECCSSCCCC------------------------TTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCC
T ss_pred ccCCCEEEeeCCCcchhh------------------------HHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCC
Confidence 566666666666655444 44455566667777777766542 2 2234678999
Q ss_pred cEEEccccccCCCCCc----cccCCCCCCEEEccCCCCCCCCCccccCC---CCCCEEEcccccCcccCCcccCCCCCCc
Q 005177 272 ESLFLFRNQLAGQVPW----EFSRVTTLKSLDLSDNRLSGPIPESFADL---KNLRLLSLMYNEMSGTVPESLVQLPSLE 344 (710)
Q Consensus 272 ~~L~L~~n~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 344 (710)
++|++++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+++ .+|..+. ++|+
T Consensus 200 ~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~ 275 (310)
T 4glp_A 200 QNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLR 275 (310)
T ss_dssp CSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCS
T ss_pred CEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCC
Confidence 999999999973 332 35788999999999999999888888877 69999999999999 6787775 8999
Q ss_pred EEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCc
Q 005177 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (710)
Q Consensus 345 ~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g 379 (710)
+|+|++|++++. |. +..+++|+.|++++|.++.
T Consensus 276 ~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 276 VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999999999964 43 5778999999999999974
No 335
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2.5e-24 Score=242.09 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=140.2
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------hHHHHHHHHHHHhccCCCCceeEEEEEEcCCceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 520 (710)
..+.||+|+||.||+|.. .+..+|+|+...... ..+.+.+|++++++++|||||++..++..++..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 457899999999999954 677899998654211 1455899999999999999997777777888889999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCC---
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 597 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--- 597 (710)
||+++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 419 SYINGKLAKDVIED------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp ECCCSEEHHHHSTT------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred ECCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 99999999999986 668999999999999998 9999999999999998 999999999987643211
Q ss_pred ------CCcccccccCchhhhhc--cCCccccceeeHHHHHHHHHhCCCCC
Q 005177 598 ------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLT 640 (710)
Q Consensus 598 ------~~~~~~~~~~~~e~~~~--~~~~~~~DVySfGvvl~Elltg~~p~ 640 (710)
....++++|.+||+... ..|+..+|+||..+-.+|.+.++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 01124566778888765 45777889999999888888776554
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.3e-25 Score=236.80 Aligned_cols=259 Identities=15% Similarity=0.114 Sum_probs=155.5
Q ss_pred EEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCc----hhccCCC-CCCEEEccCCCCCCCCCcccCCC-----CC
Q 005177 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLE-HLKVLNLAGSYFSGPIPSQFGSF-----KS 198 (710)
Q Consensus 129 ~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p----~~~~~L~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 198 (710)
+++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 56889999999988888888889999999999987766 7788888 89999999999988777777664 88
Q ss_pred CCeEEecCCcCCCCCccccccc-----ccccccccccccccccCCccccCCCccchhccccccCCccCchhccC-CCCCc
Q 005177 199 LEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN-LTKLE 272 (710)
Q Consensus 199 L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~-l~~L~ 272 (710)
|++|+|++|.+++..+..+... ++|+.|++++|.+++..+..+.. .+.. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------------------~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ--------------------AFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH--------------------HHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH--------------------HHHhCCCcee
Confidence 9999999998887666544332 45555555555544333322211 1112 13555
Q ss_pred EEEccccccCCCCCc----cccCCC-CCCEEEccCCCCCCCCCcccc----CC-CCCCEEEcccccCccc----CCcccC
Q 005177 273 SLFLFRNQLAGQVPW----EFSRVT-TLKSLDLSDNRLSGPIPESFA----DL-KNLRLLSLMYNEMSGT----VPESLV 338 (710)
Q Consensus 273 ~L~L~~n~l~~~~p~----~~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~g~----~p~~~~ 338 (710)
+|+|++|.+++..+. .+..++ +|++|+|++|++++..+..+. .+ ++|+.|+|++|.+++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 555555555432221 122232 555555555555544443222 22 3555556655555542 233333
Q ss_pred C-CCCCcEEeccCCCCCCCCC----cccCCCCCCcEEECCCCcCCcc-------CcccccCCCceeeEecccCCcccchh
Q 005177 339 Q-LPSLEILFIWNNYFSGSLP----ENLGRNSKLRWVDVSTNNFNGS-------IPPDICSGGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 339 ~-l~~L~~L~L~~N~l~g~~p----~~l~~~~~L~~L~ls~N~l~g~-------ip~~~~~~~~L~~l~l~~N~l~g~i~ 406 (710)
. .++|++|+|++|.+++..+ ..+..+++|+.|++++|.+.+. ++..+..++.|+.|++++|.+....+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 2356666666666654332 2234455666666666653322 23345556667777777777766644
Q ss_pred H
Q 005177 407 F 407 (710)
Q Consensus 407 ~ 407 (710)
.
T Consensus 302 ~ 302 (362)
T 3goz_A 302 I 302 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=4.1e-25 Score=234.32 Aligned_cols=254 Identities=20% Similarity=0.239 Sum_probs=176.8
Q ss_pred CcEEECCCCcCcccCCccccCC--CCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcC-CchhccCCCCCCEEE
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVLN 179 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~-~p~~~~~L~~L~~L~ 179 (710)
++.+|+++|.+. |..+..+ +++++|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 567777777665 4445555 6777777777777766554 45677777777777776654 666677777777777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCC-cCCCCCcccccccccccccccccccccccCCccccCCCccchhccccc-cC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGN-LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA-NL 257 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n-~l 257 (710)
|++|.+++..|..++.+++|++|++++| .+++. .++..+.++++|++|++++| ++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~-----------------------~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF-----------------------ALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH-----------------------HHHHHHHHCTTCCEEECCCCTTC
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH-----------------------HHHHHHhcCCCCCEEcCCCCCCc
Confidence 7777766666666666777777777666 34321 13334556677777888887 77
Q ss_pred Ccc-CchhccCCC-CCcEEEcccc--ccC-CCCCccccCCCCCCEEEccCCC-CCCCCCccccCCCCCCEEEccccc-Cc
Q 005177 258 SGS-IPKELSNLT-KLESLFLFRN--QLA-GQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADLKNLRLLSLMYNE-MS 330 (710)
Q Consensus 258 ~g~-~p~~l~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~ 330 (710)
++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred ChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 654 566778888 9999999998 455 4556677788999999999998 777777888889999999999885 32
Q ss_pred ccCCcccCCCCCCcEEeccCCCCCCCCCcccCCC-CCCcEEECCCCcCCccCcccccC
Q 005177 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRN-SKLRWVDVSTNNFNGSIPPDICS 387 (710)
Q Consensus 331 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~-~~L~~L~ls~N~l~g~ip~~~~~ 387 (710)
......+..+++|++|++++| ++.. .+..+ ..+..|++++|++++..|+.++.
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 222235778899999999988 3322 22222 23555668888898888877654
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.5e-23 Score=206.96 Aligned_cols=197 Identities=17% Similarity=0.199 Sum_probs=139.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC-CCCCCChhhcCCCCCCEEECCC-CCCCcCCchhccCCCCCCEE
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L~L~~-N~l~~~~p~~~~~L~~L~~L 178 (710)
+.|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999997777788999999999999997 8877777899999999999998 99997777889999999999
Q ss_pred EccCCCCCCCCCcccCCCCCCC---eEEecCC-cCCCCCccccccccccc-ccccccccccccCCccccCCCccchhccc
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLE---FLHLAGN-LLNDQIPAELGMLKTVT-HMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~~~g~~p~~l~~l~~L~~L~ls 253 (710)
++++|.+++ +|. |..+++|+ +|++++| .+++..+..+..+++|+ .|++++|.++ .+|...
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~------------ 175 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA------------ 175 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTT------------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhh------------
Confidence 999999986 676 88888888 8999888 77655444455555555 5555555444 233222
Q ss_pred cccCCccCchhccCCCCCcEEEccccc-cCCCCCccccCC-CCCCEEEccCCCCCCCCCccccCCCCCCEEEcccc
Q 005177 254 GANLSGSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327 (710)
Q Consensus 254 ~n~l~g~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 327 (710)
+.. ++|+.|++++|. +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 176 -----------~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 176 -----------FNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp -----------TTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred -----------cCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 222 455555555553 554444455555 566666666666653 3322 4455666666544
No 339
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.89 E-value=3.6e-25 Score=253.34 Aligned_cols=324 Identities=13% Similarity=0.073 Sum_probs=207.4
Q ss_pred EEEEEcCCCC-Ccc-cCCcchhhhcCCCCcEEECCCCcCccc----CCccccCCCCCcEEECcCCCCCC----CCChhhc
Q 005177 77 VVGINLSMKG-LSG-ALPGKPLRIFFNELVDLNLSHNSFSGQ----FPVEIFNLTSLISLDISRNNFSG----HFPGGIQ 146 (710)
Q Consensus 77 v~~l~l~~~~-l~g-~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~l~ 146 (710)
+..++++.+. +.. .++..... +++|++|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+.
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~--~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTH--CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHH--CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHHHHhh--CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 6677776654 211 11111223 78999999999998765 44455688999999999999973 4455567
Q ss_pred CCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCC---CCCCcccCCCCCCCeEEecCCcCCCCCcccccccccc
Q 005177 147 SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFS---GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV 223 (710)
Q Consensus 147 ~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 223 (710)
++++|++|++++|.+.+ +|..+.++++|++|+++..... +..+..+..+++|+.|+++++. .+.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCC
Confidence 89999999999999886 7888999999999999864332 3344566777888888887753 45677777778888
Q ss_pred cccccccccccccCC-ccccCCCccchhccccccCCccCchhccCCCCCcEEEccc-----------cccCCC-CCcccc
Q 005177 224 THMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR-----------NQLAGQ-VPWEFS 290 (710)
Q Consensus 224 ~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~-----------n~l~~~-~p~~~~ 290 (710)
++|++++|.+++... ..+.++++|+.|+++++-..+.++..+..+++|++|++++ |.+++. ++..+.
T Consensus 296 ~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~ 375 (592)
T 3ogk_B 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375 (592)
T ss_dssp CEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHH
T ss_pred cEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHh
Confidence 888888877654433 3356777777777773322233444445567777777772 444432 112234
Q ss_pred CCCCCCEEEccCCCCCCCCCccccC-CCCCCEEEcc----cccCccc-----CCcccCCCCCCcEEeccCCC--CCCCCC
Q 005177 291 RVTTLKSLDLSDNRLSGPIPESFAD-LKNLRLLSLM----YNEMSGT-----VPESLVQLPSLEILFIWNNY--FSGSLP 358 (710)
Q Consensus 291 ~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----~p~~~~~l~~L~~L~L~~N~--l~g~~p 358 (710)
.+++|++|+++.|++++..+..++. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~ 455 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGL 455 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHH
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHH
Confidence 4667777777667766655555554 6677777774 5555542 23334556667777765432 443333
Q ss_pred cccC-CCCCCcEEECCCCcCCc-cCcccccCCCceeeEecccCCcccc
Q 005177 359 ENLG-RNSKLRWVDVSTNNFNG-SIPPDICSGGVLFKLILFSNNFTGI 404 (710)
Q Consensus 359 ~~l~-~~~~L~~L~ls~N~l~g-~ip~~~~~~~~L~~l~l~~N~l~g~ 404 (710)
..+. .+++|+.|++++|.+++ .++..+..+++|++|++++|.+++.
T Consensus 456 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 456 SYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 3332 25666677777666665 2344445556666777776666543
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=3.7e-22 Score=196.36 Aligned_cols=186 Identities=20% Similarity=0.208 Sum_probs=155.7
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
..|.|.+|.|+... +. .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++.
T Consensus 5 C~C~~~~v~c~~~~------------l~-~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (208)
T 2o6s_A 5 CSCSGTTVECYSQG------------RT-SVPTGI----PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL 67 (208)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CEECCCEEEecCCC------------cc-CCCCCC----CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc
Confidence 45899999998622 11 233332 45799999999999976666788999999999999999987
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 220 (710)
.+..|.++++|++|+|++|.+++..+..+.++++|++|+|++|++++..+..|.++++|++|++++|.+++..+..+..+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 77778999999999999999997777778999999999999999998777778999999999999999997777678889
Q ss_pred ccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCC
Q 005177 221 KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270 (710)
Q Consensus 221 ~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~ 270 (710)
++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 148 ~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 999999999987764 3457888888888888888887776554
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.7e-22 Score=203.28 Aligned_cols=201 Identities=16% Similarity=0.221 Sum_probs=164.8
Q ss_pred CCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCCCCCCEEEccC-CCCCCCCCcccCCCCCCCeE
Q 005177 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L 202 (710)
++|++|+|++|++++..+..|.++++|++|++++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 489999999999998888889999999999999997 8876667899999999999998 99997777889999999999
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccc-cCCccCchhccCCCCCc-EEEccccc
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA-NLSGSIPKELSNLTKLE-SLFLFRNQ 280 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n-~l~g~~p~~l~~l~~L~-~L~L~~n~ 280 (710)
++++|.+++ +|. +..+++|+ .|++|++++| ++++..+..|..+++|+ .|++++|.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred eCCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 999998875 453 33332222 2337888888 77766667788899999 99999999
Q ss_pred cCCCCCccccCCCCCCEEEccCCC-CCCCCCccccCC-CCCCEEEcccccCcccCCcccCCCCCCcEEeccCCC
Q 005177 281 LAGQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (710)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 352 (710)
++...+..+.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++.
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 98433334444 899999999995 987777889999 999999999999985 5544 68899999998764
No 342
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.88 E-value=3.1e-24 Score=245.54 Aligned_cols=327 Identities=13% Similarity=0.058 Sum_probs=245.0
Q ss_pred cEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCc-Ccc-cCCccccCCCCCcEEECcCCCCCCC----CChhhcCCC
Q 005177 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNS-FSG-QFPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLR 149 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~ 149 (710)
.+..++++++.+++..+..+....-.+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.+++
T Consensus 113 ~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~ 192 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNT 192 (592)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCC
T ss_pred CCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCC
Confidence 3677788877776655544444211349999999987 221 1233334789999999999998776 444567889
Q ss_pred CCCEEECCCCCCC----cCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCC---CCCccccccccc
Q 005177 150 NLLVLDAFSNSFS----GSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN---DQIPAELGMLKT 222 (710)
Q Consensus 150 ~L~~L~L~~N~l~----~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~ 222 (710)
+|++|++++|.++ +.++..+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++
T Consensus 193 ~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 9999999999997 3456667789999999999999886 7788899999999999864332 345567788889
Q ss_pred ccccccccccccccCCccccCCCccchhccccccCCccCc-hhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEcc
Q 005177 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301 (710)
Q Consensus 223 L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 301 (710)
|+.|+++++ ..+.+|..+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+++
T Consensus 272 L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 272 LCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp CCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred ccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 999988875 345677788889999999999999775444 346789999999999443333344445678899999999
Q ss_pred C-----------CCCCCC-CCccccCCCCCCEEEcccccCcccCCcccCC-CCCCcEEecc----CCCCCCC-----CCc
Q 005177 302 D-----------NRLSGP-IPESFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIW----NNYFSGS-----LPE 359 (710)
Q Consensus 302 ~-----------N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~L~----~N~l~g~-----~p~ 359 (710)
+ |.+++. ++.....+++|+.|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 3 566543 2333456899999999999998877777765 8999999996 7778764 333
Q ss_pred ccCCCCCCcEEECCCC--cCCccCcccccC-CCceeeEecccCCcccc
Q 005177 360 NLGRNSKLRWVDVSTN--NFNGSIPPDICS-GGVLFKLILFSNNFTGI 404 (710)
Q Consensus 360 ~l~~~~~L~~L~ls~N--~l~g~ip~~~~~-~~~L~~l~l~~N~l~g~ 404 (710)
.+..+++|+.|+++.| .+++..+..+.. +++|+.|++++|++++.
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 478 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE 478 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH
Confidence 4667899999999754 377766666554 78899999999998863
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=8.5e-22 Score=206.14 Aligned_cols=192 Identities=24% Similarity=0.412 Sum_probs=83.9
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
++++|++|++++|.++. +| .+..+++|++|+|++|.+++. |. +.++++|++|+|++|.+++ +| .+..+++|+.|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE
Confidence 44455555555555443 23 344555555555555555432 22 5555555555555555543 22 34555555555
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|.+++. |. +..+++|++|++++|.+++..+ ++.+++|++|++++|++++..+ +..+++|+.|++++|.++
T Consensus 113 ~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 5555554431 11 2233333333333222221111 3334444444444444443211 444444555555554444
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
+..+ +..+++|++|++++|++++..| +..+++|+.|++++|.++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 3222 3444444444444444443321 444444444444444443
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=2e-21 Score=197.14 Aligned_cols=107 Identities=20% Similarity=0.226 Sum_probs=75.1
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
..++++++++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3567777777776 5665544 567777777777777777677777777777777777777666667777777777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+|++++..+..|..+++|++|+|++|.+++
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 121 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCC
Confidence 777776666666666777777666666653
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.1e-22 Score=228.89 Aligned_cols=200 Identities=24% Similarity=0.297 Sum_probs=133.5
Q ss_pred eeeee-eeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC
Q 005177 64 SWSGV-KCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP 142 (710)
Q Consensus 64 ~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (710)
.|.|+ .|.. +.++.++++++++++ +|+.+ +++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|
T Consensus 49 ~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l----~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip 116 (571)
T 3cvr_A 49 AVSLLKECLI--NQFSELQLNRLNLSS-LPDNL----PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LP 116 (571)
T ss_dssp HHHHHHHHHH--TTCSEEECCSSCCSC-CCSCC----CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CC
T ss_pred hhhhcccccc--CCccEEEeCCCCCCc-cCHhH----cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cc
Confidence 79999 6864 356677777777765 56544 356777777777776 556 346677777777777776 55
Q ss_pred hhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccccc
Q 005177 143 GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKT 222 (710)
Q Consensus 143 ~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 222 (710)
. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. +.
T Consensus 117 ~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~---- 179 (571)
T 3cvr_A 117 E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP---- 179 (571)
T ss_dssp C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----
T ss_pred h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----
Confidence 5 544 67777777777765 555 56677777777777765 554 45667777777766654 444 32
Q ss_pred ccccccccccccccCCccccCCCccchhccccccCCccCchhccC-----CCCCcEEEccccccCCCCCccccCCCCCCE
Q 005177 223 VTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN-----LTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297 (710)
Q Consensus 223 L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~-----l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 297 (710)
++|+.|++++|+++ .+|. +.. .+.|+.|+|++|+++ .+|..+..+++|+.
T Consensus 180 ----------------------~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 180 ----------------------ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp ----------------------TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred ----------------------CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 45555555555555 3444 332 122388888888887 47777777889999
Q ss_pred EEccCCCCCCCCCccccCCC
Q 005177 298 LDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~ 317 (710)
|+|++|.+++.+|..+..++
T Consensus 235 L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 235 IILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EECCSSSCCHHHHHHHHHHH
T ss_pred EEeeCCcCCCcCHHHHHHhh
Confidence 99999999888888777654
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.2e-21 Score=205.10 Aligned_cols=192 Identities=21% Similarity=0.374 Sum_probs=165.9
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 6789999999999874 55 68899999999999999986544 8999999999999999986 34 689999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++ +|. +..+++|+.|++++|.+++..+ ++.+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 99999986 443 8999999999999999986544 8889999999999999886433 8899999999999999986
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
..+ +..+++|+.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 544 8889999999999999987653 7889999999999999975
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3e-21 Score=217.06 Aligned_cols=188 Identities=25% Similarity=0.362 Sum_probs=140.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 67777777777765 666553 67777777777777 455 446777777777777775 565 544 67777777
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|++++ +|. .+++|+.|+|++|.+++ + |. .+++|++|++++|++++ +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l------------------------p~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-L------------------------PE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-C------------------------CC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-C------------------------CC---cCCCcCEEECCCCCCCC-c
Confidence 777765 555 46667777777766653 3 32 34678888899999886 6
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCC-------CEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCC
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL-------KSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 334 (710)
|. +. ++|+.|+|++|+++ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 66 65 89999999999999 6666 554 77 99999999999 588888889999999999999999999
Q ss_pred cccCCCC
Q 005177 335 ESLVQLP 341 (710)
Q Consensus 335 ~~~~~l~ 341 (710)
..+..++
T Consensus 248 ~~l~~l~ 254 (571)
T 3cvr_A 248 ESLSQQT 254 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8887654
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=5.5e-21 Score=203.82 Aligned_cols=202 Identities=13% Similarity=0.082 Sum_probs=129.0
Q ss_pred ceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC
Q 005177 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP 142 (710)
Q Consensus 63 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (710)
|+|..|.|+. ++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l----~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC----CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred eeCCEEEecC------------CCCC-ccCcCc----CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 7777777864 2222 344443 3578999999999985555578999999999999999877666
Q ss_pred h-hhcCCCCCCE-EECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC-CcCCCCCcccccc
Q 005177 143 G-GIQSLRNLLV-LDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG-NLLNDQIPAELGM 219 (710)
Q Consensus 143 ~-~l~~L~~L~~-L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~ 219 (710)
. .|.++++|+. ++++.|+++...|..|.++++|++|++++|++++..+..+....++..|++.+ |.+....+..+..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 4 5788888765 66778999987788899999999999999999877777777777888888865 4444333333333
Q ss_pred cc-cccccccccccccccCCccccCCCccchhccccccCCccCc-hhccCCCCCcEEEccccccC
Q 005177 220 LK-TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 220 l~-~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~L~L~~n~l~ 282 (710)
+. .++.|++++|.++ .+|......++|+.|++++++..+.+| ..|..+++|+.|++++|+++
T Consensus 152 ~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 32 3444555555444 233333333444444444322222222 22344444444444444444
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=7.3e-21 Score=202.84 Aligned_cols=241 Identities=16% Similarity=0.156 Sum_probs=159.1
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCc-hhccCCCCCCE-EEcc
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP-AEISQLEHLKV-LNLA 181 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p-~~~~~L~~L~~-L~L~ 181 (710)
++++.++|+++ .+|..+ .+++++|+|++|+|+...++.|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45677888887 678766 3689999999999987666778999999999999999877665 46788888775 6677
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
.|+++...|..|.++++|++|++++|.+....+..+....++..+++..+ +++....
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~-----------------------~~i~~l~ 145 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-----------------------INIHTIE 145 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC-----------------------TTCCEEC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc-----------------------ccccccc
Confidence 78998877888999999999999999887655544444444444444322 2333222
Q ss_pred chhccCC-CCCcEEEccccccCCCCCccccCCCCCCEEEccC-CCCCCCCCccccCCCCCCEEEcccccCcccCCcccCC
Q 005177 262 PKELSNL-TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (710)
Q Consensus 262 p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 339 (710)
+..|..+ ..++.|++++|+++. +|.......+|+.|++++ |.++...+..|..+++|+.|+|++|+++. +|.. .
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~-lp~~--~ 221 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-LPSY--G 221 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC-CCSS--S
T ss_pred ccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc-cChh--h
Confidence 3334433 346667777777764 333333445677777764 44443333456777777777777777774 3332 2
Q ss_pred CCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 340 l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
+.+|+.|.+.++.--..+| .+.++++|+.++++++
T Consensus 222 ~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 222 LENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred hccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 3455555544443334566 3667777888777654
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=7.8e-21 Score=186.84 Aligned_cols=181 Identities=18% Similarity=0.189 Sum_probs=127.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46777888876 456544 468999999999999877777889999999999999998766667888999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
++++..+..|.++++|++|++++|.+++..+..+..+++|++| ++++|++++..+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------------------------~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL------------------------RLYQNQLKSVPDG 142 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE------------------------ECCSSCCSCCCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE------------------------ECCCCccceeCHH
Confidence 9987767778889999999999988876555445555555554 4555555444444
Q ss_pred hccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 005177 264 ELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 318 (710)
.+..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|.+++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 45555555556655555443 2334555666666666666665555443
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=5.7e-22 Score=204.34 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=108.6
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-------------------hHHHHHHHHHHHhccCCCCceeEEEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGFC 510 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 510 (710)
..+.||+|+||.||+|...+|+.||||.++.+.. ....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 4588999999999999988899999999975321 3456889999999998 4 6666655
Q ss_pred EcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 511 YNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 511 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~----~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV----ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred ec-cceEEEEEecCCCcHHH-cch----hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 43 56799999999999998 532 23457999999999999998 999999999999999 9999999999987
Q ss_pred cc
Q 005177 591 LT 592 (710)
Q Consensus 591 ~~ 592 (710)
..
T Consensus 241 ~~ 242 (282)
T 1zar_A 241 EV 242 (282)
T ss_dssp ET
T ss_pred EC
Confidence 54
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=8.9e-22 Score=229.25 Aligned_cols=266 Identities=19% Similarity=0.191 Sum_probs=129.2
Q ss_pred ChhhHHHHHHHHhhCCCC-CCCCCCCCCCCCCCCCCCCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCC
Q 005177 24 NDPYSEALLSLKSELVDD-FNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNE 102 (710)
Q Consensus 24 ~~~~~~all~~k~~~~~~-~~~l~~w~~~~~~~~~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~ 102 (710)
...++++|+++..+...+ ...-..|..+ .+..+.|.++.++. .+++.+++..+++... +.. .
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~-------~ 192 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-------STPSGTATNSAVST--PLTPKIELFANGKDEA-NQA-------L 192 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-------CCccccCCCceecC--CccceEEeeCCCCCcc-hhh-------H
Confidence 345789999999887322 1233455432 34567899988875 6788889888877653 222 2
Q ss_pred CcEEECCCCcCcc---------cCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCC
Q 005177 103 LVDLNLSHNSFSG---------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (710)
Q Consensus 103 L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~ 173 (710)
|+.++|++|.+.+ ..|..+..+++|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3444455544433 34667888899999999999987 67777888999999999999998 7888899999
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCc-cchhcc
Q 005177 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE-VQYLDI 252 (710)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~-L~~L~l 252 (710)
+|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..++.+++|+.|+|++|.+++.+|..+..+.. +..+++
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 9999999999998 77888999999999999999886 67888888888888888888888877776654432 234677
Q ss_pred ccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 253 s~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
++|.++|.+|.. |..|+++.|.. .-.. .+.+.+..+..+.++..+....+++|.+.+.
T Consensus 349 ~~N~l~~~~p~~------l~~l~l~~n~~---~~~~-------------~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 349 RDNRPEIPLPHE------RRFIEINTDGE---PQRE-------------YDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HHCCCCCCCCCC---------------------------------------------------------------CCCGG
T ss_pred ccCcccCcCccc------cceeEeecccc---cccc-------------cCCccccccchhhcccccceeeeeccccccc
Confidence 777777777653 44455554410 0000 1123333344455566666677777766543
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.6e-19 Score=180.31 Aligned_cols=161 Identities=23% Similarity=0.241 Sum_probs=135.9
Q ss_pred CCCCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCC
Q 005177 59 KIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFS 138 (710)
Q Consensus 59 ~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 138 (710)
....|+|.+|.|+... + +.+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 15 ~~~~Cs~~~v~c~~~~------------l-~~ip~~~----~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 77 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKR------------H-ASVPAGI----PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG 77 (229)
T ss_dssp TTCEEETTEEECTTSC------------C-SSCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCEEeCCEeEccCCC------------c-CccCCCC----CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC
Confidence 4578999999998522 1 2344433 368999999999999988989999999999999999998
Q ss_pred CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccc
Q 005177 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218 (710)
Q Consensus 139 ~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 218 (710)
+..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..+.
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 156 (229)
T 3e6j_A 78 ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156 (229)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT
T ss_pred CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHh
Confidence 777777899999999999999999877777899999999999999998 7888999999999999999999876666777
Q ss_pred ccccccccccccccccccC
Q 005177 219 MLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 219 ~l~~L~~L~l~~n~~~g~~ 237 (710)
.+++|+.|++++|.+....
T Consensus 157 ~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TCTTCCEEECTTSCBCTTB
T ss_pred CCCCCCEEEeeCCCccCCc
Confidence 8888888888888776543
No 354
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.81 E-value=1.4e-22 Score=231.86 Aligned_cols=322 Identities=16% Similarity=0.106 Sum_probs=162.4
Q ss_pred cEEEEEcCCCCCcccCCcchh-hhcCCCCcEEECCCC-cCccc-CCccccCCCCCcEEECcCCCCCCCCChhhc----CC
Q 005177 76 IVVGINLSMKGLSGALPGKPL-RIFFNELVDLNLSHN-SFSGQ-FPVEIFNLTSLISLDISRNNFSGHFPGGIQ----SL 148 (710)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~-~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----~L 148 (710)
.+..++++++.+++..+..+. . +++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~--~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKS--FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHH--CTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHh--CCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 466777777776665444443 3 677888888877 44432 333344778888888888877665544443 55
Q ss_pred CCCCEEECCCCC--CCc-CCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCc-----------------
Q 005177 149 RNLLVLDAFSNS--FSG-SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----------------- 208 (710)
Q Consensus 149 ~~L~~L~L~~N~--l~~-~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~----------------- 208 (710)
++|++|++++|. ++. .++..+.++++|++|+|++|...+.+|..+.++++|+.|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 678888887776 221 122223456777888877763222244445555555555543321
Q ss_pred ---------CC----CCCcccccccccccccccccccccccCC-ccccCCCccchhccccccCCc-cCchhccCCCCCcE
Q 005177 209 ---------LN----DQIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLES 273 (710)
Q Consensus 209 ---------l~----~~~p~~l~~l~~L~~L~l~~n~~~g~~p-~~l~~l~~L~~L~ls~n~l~g-~~p~~l~~l~~L~~ 273 (710)
+. +.+|..+..+++|++|++++|.+++... ..+.++++|+.|++++| ++. .++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 11 1223333356677777777776553322 22446667777777666 321 12222233566666
Q ss_pred EEccc---------cccCCCCCccc-cCCCCCCEEEccCCCCCCCCCcccc-CCCCCCEEEcc--c----ccCcc-----
Q 005177 274 LFLFR---------NQLAGQVPWEF-SRVTTLKSLDLSDNRLSGPIPESFA-DLKNLRLLSLM--Y----NEMSG----- 331 (710)
Q Consensus 274 L~L~~---------n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g----- 331 (710)
|++++ +.+++.....+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 66632 22322111111 1245555555555555544333333 35555555555 2 33331
Q ss_pred cCCcccCCCCCCcEEeccCCCCCCCCCcccCC-CCCCcEEECCCCcCCccCcccc-cCCCceeeEecccCCc
Q 005177 332 TVPESLVQLPSLEILFIWNNYFSGSLPENLGR-NSKLRWVDVSTNNFNGSIPPDI-CSGGVLFKLILFSNNF 401 (710)
Q Consensus 332 ~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~-~~~L~~L~ls~N~l~g~ip~~~-~~~~~L~~l~l~~N~l 401 (710)
.++..+..+++|+.|++++ .+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|++|++++|.+
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 1111233445555555544 333322222322 4445555555555544333332 3344555555555555
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=4e-19 Score=176.24 Aligned_cols=153 Identities=19% Similarity=0.206 Sum_probs=132.0
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCc-cccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N 159 (710)
+++++.+. .+|..+ ...+++|+|++|.+++..|. .|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 17 ~~s~n~l~-~iP~~~----~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 17 DCSNQKLN-KIPEHI----PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp ECCSSCCS-SCCSCC----CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCCCCcc-cCccCC----CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 33344444 355554 34678999999999987654 5789999999999999999988889999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|++++|.+.+..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9998888889999999999999999999889999999999999999999998889899989999999988888876543
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.3e-19 Score=203.96 Aligned_cols=192 Identities=28% Similarity=0.355 Sum_probs=138.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
..+..++|+.+.+....+ +..+++|+.|+|++|.+.. +| .+..+++|+.|+|++|.+++..| +..+++|++|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 346667788888775544 5678899999999999875 34 58899999999999999987554 889999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
++|.+++ +| .+..+++|+.|+|++|.+++. +.+. .+++|+.|+|++|++++.
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~------------------------~l~~L~~L~Ls~N~l~~l 146 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLV------------------------HLPQLESLYLGNNKITDI 146 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGG------------------------GCTTCSEEECCSSCCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--cccc------------------------CCCccCEEECCCCccCCc
Confidence 9999985 34 688889999999999888752 2233 445555555555555543
Q ss_pred CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 147 --~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 147 --TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 346666677777777777766544 66677777777777777653 3466777777777777777653
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.7e-19 Score=203.28 Aligned_cols=185 Identities=23% Similarity=0.335 Sum_probs=133.0
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~ 160 (710)
++....+.+.++ ... ++.|+.|+|++|.+.. +| .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.
T Consensus 27 ~l~~~~i~~~~~--~~~--L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 27 NLKKKSVTDAVT--QNE--LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HTTCSCTTSEEC--HHH--HTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred hccCCCcccccc--hhc--CCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 444444544333 333 7899999999999974 44 68999999999999999998655 9999999999999999
Q ss_pred CCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCcc
Q 005177 161 FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQ 240 (710)
Q Consensus 161 l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~ 240 (710)
+++ +| .+..+++|++|+|++|.+++ + +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L------------ 160 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL------------ 160 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC------------
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC------------
Confidence 986 34 79999999999999999986 3 4689999999999999998764 34445555555554
Q ss_pred ccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 241 LGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 241 l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
++|.+++..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+
T Consensus 161 ------------s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 161 ------------EDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ------------CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred ------------cCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 4444444333 44555555555555555442 234555555555555555544
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.1e-18 Score=173.08 Aligned_cols=158 Identities=23% Similarity=0.311 Sum_probs=134.4
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
..|.|..+.|.. +++. .+|..+ .+.|+.|+|++|.+++..|..|..+++|++|+|++|++++.
T Consensus 9 C~C~~~~v~c~~------------~~l~-~iP~~l----~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~ 71 (220)
T 2v9t_B 9 CTCSNNIVDCRG------------KGLT-EIPTNL----PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL 71 (220)
T ss_dssp SEEETTEEECTT------------SCCS-SCCSSC----CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE
T ss_pred CEECCCEEEcCC------------CCcC-cCCCcc----CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc
Confidence 347787777764 2222 244433 35799999999999987777899999999999999999999
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccccc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGML 220 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 220 (710)
.|..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..+..+
T Consensus 72 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 151 (220)
T 2v9t_B 72 APDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 151 (220)
T ss_dssp CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCC
Confidence 89999999999999999999997666668999999999999999999889999999999999999999998777778888
Q ss_pred ccccccccccccccc
Q 005177 221 KTVTHMEIGYNFYQG 235 (710)
Q Consensus 221 ~~L~~L~l~~n~~~g 235 (710)
++|+.|++++|.+..
T Consensus 152 ~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 152 RAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred CCCCEEEeCCCCcCC
Confidence 888888888887653
No 359
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.79 E-value=8.8e-22 Score=225.25 Aligned_cols=305 Identities=15% Similarity=0.126 Sum_probs=218.1
Q ss_pred CCCCcEEECCCCcCcccCCcccc-CCCCCcEEECcCC-CCCCC-CChhhcCCCCCCEEECCCCCCCcCCchhcc----CC
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRN-NFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEIS----QL 172 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~----~L 172 (710)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 78899999999998877777776 6899999999998 45432 444556899999999999998765544443 67
Q ss_pred CCCCEEEccCCC--CCC-CCCcccCCCCCCCeEEecCCcCCCCCccccccccccccccccccc-----------------
Q 005177 173 EHLKVLNLAGSY--FSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF----------------- 232 (710)
Q Consensus 173 ~~L~~L~L~~n~--l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~----------------- 232 (710)
++|++|++++|. ++. .++..+.++++|+.|++++|...+.+|..+..+++|+.|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 799999999887 211 111123456899999999884333477777778888888754431
Q ss_pred ---------c----cccCCccccCCCccchhccccccCCccCc-hhccCCCCCcEEEccccccCC-CCCccccCCCCCCE
Q 005177 233 ---------Y----QGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKS 297 (710)
Q Consensus 233 ---------~----~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~ 297 (710)
+ .+.+|..+..+++|+.|++++|.+++... ..+..+++|+.|++++| ++. .++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 1 11233334467899999999999775433 33568999999999988 432 22333346899999
Q ss_pred EEccC---------CCCCCCCCcccc-CCCCCCEEEcccccCcccCCcccC-CCCCCcEEecc--C----CCCCCCC---
Q 005177 298 LDLSD---------NRLSGPIPESFA-DLKNLRLLSLMYNEMSGTVPESLV-QLPSLEILFIW--N----NYFSGSL--- 357 (710)
Q Consensus 298 L~Ls~---------N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~--~----N~l~g~~--- 357 (710)
|+++. +.+++.....+. .+++|+.|.++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 99943 455443223333 489999999999999876666665 58999999999 4 5555321
Q ss_pred --CcccCCCCCCcEEECCCCcCCccCcccccC-CCceeeEecccCCcccchh
Q 005177 358 --PENLGRNSKLRWVDVSTNNFNGSIPPDICS-GGVLFKLILFSNNFTGIVM 406 (710)
Q Consensus 358 --p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~-~~~L~~l~l~~N~l~g~i~ 406 (710)
+..+..+++|+.|++++ .+++..+..++. +++|+.|++++|.+++..+
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 11256778999999977 777776666665 7899999999999977543
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=8.3e-19 Score=173.92 Aligned_cols=155 Identities=17% Similarity=0.206 Sum_probs=117.2
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCC-hhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP-GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47999999987 5776654 456899999999998755 4578899999999999999987777899999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCc
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p 262 (710)
|++++..|..|.++++|++|+|++|.+++..|..+..+++ |++|++++|++++..|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~------------------------L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSS------------------------VRLLSLYDNQITTVAP 146 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTT------------------------CSEEECTTSCCCCBCT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCcc------------------------CCEEECCCCcCCEECH
Confidence 9998877778888999999999998888766665555554 4555555555555555
Q ss_pred hhccCCCCCcEEEccccccCCCC
Q 005177 263 KELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 263 ~~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
..+..+++|+.|++++|.+++..
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECSG
T ss_pred HHhcCCCCCCEEEecCcCCcCCC
Confidence 55555666666666666655433
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=5.4e-19 Score=183.18 Aligned_cols=170 Identities=22% Similarity=0.336 Sum_probs=101.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|+.|++++|.+.. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 5567777777776653 23 36666777777777777765433 6667777777777777664 22 366677777777
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++. +.+..+++|+.|++++|.+++. ..+ +.+++|+.|++++|++++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l------------------------~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVL------------------------SRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGG------------------------GGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhh------------------------ccCCCCCEEEccCCcccc
Confidence 777766642 3466666666666666666543 334 444555555555555554
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (710)
..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred chh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 333 5555566666666665554 22 25555666666666665553
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.2e-18 Score=172.81 Aligned_cols=152 Identities=19% Similarity=0.265 Sum_probs=118.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.+++++|.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46788899887 5776654 78999999999999888888999999999999999999888999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
+++...+..|.++++|++|+|++|.+++..|..+..+++ |++|++++|++++..+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~------------------------L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN------------------------LNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT------------------------CCEEECCSSCCSCCCTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCC------------------------CCEEECCCCcCCEECHH
Confidence 999766666888999999999999888766665555554 45555555555544444
Q ss_pred hccCCCCCcEEEccccccC
Q 005177 264 ELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~ 282 (710)
.+..+++|+.|+|++|.+.
T Consensus 147 ~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTTCTTCCEEECCSSCEE
T ss_pred HHhCCCCCCEEEeCCCCcC
Confidence 5555666666666666654
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.4e-19 Score=189.83 Aligned_cols=126 Identities=26% Similarity=0.175 Sum_probs=103.7
Q ss_pred EcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCcccc-CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCC
Q 005177 81 NLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSN 159 (710)
Q Consensus 81 ~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N 159 (710)
+++++++.. +|..+ ...++.|+|++|+|++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 24 ~c~~~~l~~-iP~~~----~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 24 SCSKQQLPN-VPQSL----PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp ECCSSCCSS-CCSSC----CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCCCCcCc-cCccC----CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 444445543 45444 34688999999999877777776 8999999999999999888888999999999999999
Q ss_pred CCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 160 SFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 160 ~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|.+++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 9987777788899999999999999988888888889999999999888875
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2e-21 Score=219.48 Aligned_cols=202 Identities=19% Similarity=0.164 Sum_probs=117.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC-------------CCCCCChhhcCCCCCCEEE-CCCCCCCcCC
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-------------FSGHFPGGIQSLRNLLVLD-AFSNSFSGSV 165 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~l~~L~~L~~L~-L~~N~l~~~~ 165 (710)
.+.|+.|+|++|.++ .+|.+++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 566777777777775 667777777777777776654 4556666666666666666 4444322
Q ss_pred chhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCC
Q 005177 166 PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS 245 (710)
Q Consensus 166 p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~ 245 (710)
+|+.+.+++|.++.. |. ..|+.|+|++|.+++ +|. ++.+++|+.|++++|.++ .+|..+++++
T Consensus 424 --------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 --------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp --------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred --------hhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 111111222222211 10 124445555555443 343 445555555555555554 4555566666
Q ss_pred ccchhccccccCCccCchhccCCCCCcEEEccccccCCCC-CccccCCCCCCEEEccCCCCCCCCCcc---ccCCCCCCE
Q 005177 246 EVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV-PWEFSRVTTLKSLDLSDNRLSGPIPES---FADLKNLRL 321 (710)
Q Consensus 246 ~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~ 321 (710)
+|+.|+|++|++++ +| .++.+++|+.|+|++|++++.. |..+..+++|+.|+|++|.+++.+|.. +..+++|+.
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~ 564 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 564 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSE
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCc
Confidence 66666666666665 45 5667777777777777777665 667777777777777777776654421 234677777
Q ss_pred EEc
Q 005177 322 LSL 324 (710)
Q Consensus 322 L~L 324 (710)
|++
T Consensus 565 L~l 567 (567)
T 1dce_A 565 ILT 567 (567)
T ss_dssp EEC
T ss_pred cCC
Confidence 754
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=8.2e-19 Score=181.82 Aligned_cols=191 Identities=28% Similarity=0.358 Sum_probs=152.9
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEcc
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~ 181 (710)
++..+++..+.+.+..+ +..+++|++|++++|.+... | .+..+++|++|+|++|.+++..| +.++++|++|+|+
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 34455677777765433 45788899999999988754 4 48889999999999999986544 8889999999999
Q ss_pred CCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccC
Q 005177 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (710)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~ 261 (710)
+|.+++ +| .+..+++|++|++++|.+++. + .+..+++|+.|++++|++++.
T Consensus 99 ~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~------------------------~l~~l~~L~~L~l~~n~l~~~- 149 (291)
T 1h6t_A 99 ENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--N------------------------GLVHLPQLESLYLGNNKITDI- 149 (291)
T ss_dssp SSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--G------------------------GGGGCTTCCEEECCSSCCCCC-
T ss_pred CCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--h------------------------hhcCCCCCCEEEccCCcCCcc-
Confidence 998875 33 488888888888888887642 1 244567788888888888754
Q ss_pred chhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 262 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
..+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++..
T Consensus 150 -~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 150 -TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred -hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 568899999999999999997655 8899999999999999986 44 489999999999999999853
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.2e-18 Score=186.43 Aligned_cols=177 Identities=19% Similarity=0.167 Sum_probs=149.2
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhc-CCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+.+++++|.++ .+|..+. ..+++|+|++|++++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46889999987 5776554 4589999999999988887787 899999999999999987788899999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccc---cCCCccchhccccccCCc
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQL---GNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l---~~l~~L~~L~ls~n~l~g 259 (710)
|++++..+..|.++++|++|+|++|.+++..|..+..+++|+.|++++|.+++..+..+ ..+++|+.|+|++|++++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998777789999999999999999998888899999999999999999886433334 578999999999999997
Q ss_pred cCchhccCCCC--CcEEEccccccCC
Q 005177 260 SIPKELSNLTK--LESLFLFRNQLAG 283 (710)
Q Consensus 260 ~~p~~l~~l~~--L~~L~L~~n~l~~ 283 (710)
..+..+..++. ++.|+|++|.+.-
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 66677777776 4889999998864
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=5.1e-21 Score=216.23 Aligned_cols=217 Identities=16% Similarity=0.160 Sum_probs=154.6
Q ss_pred cCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccc
Q 005177 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTH 225 (710)
Q Consensus 146 ~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 225 (710)
..+++|+.|+|++|.++ .+|.++++|++|+.|++++|.....+|.. +..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 34566666666666665 56666666666666666554321111100 0112245566777777777777
Q ss_pred cc-cccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCC
Q 005177 226 ME-IGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304 (710)
Q Consensus 226 L~-l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (710)
|+ ++.|.+ ..|+.+.+++|.++...+ ..|+.|+|++|.+++ +|. +..+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 77 555543 356667777777664322 248889999999986 565 8889999999999999
Q ss_pred CCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCC-CcccCCCCCCcEEECCCCcCCccCcc
Q 005177 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL-PENLGRNSKLRWVDVSTNNFNGSIPP 383 (710)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~l~~~~~L~~L~ls~N~l~g~ip~ 383 (710)
++ .+|..++.+++|+.|+|++|++++ +| .++.+++|++|+|++|.+++.. |..++.+++|+.|++++|.+++..|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 98 788899999999999999999986 67 7889999999999999999876 88899999999999999999876542
Q ss_pred c---ccCCCceeeEec
Q 005177 384 D---ICSGGVLFKLIL 396 (710)
Q Consensus 384 ~---~~~~~~L~~l~l 396 (710)
. +..+++|+.|++
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 123567777653
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.5e-18 Score=170.51 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=118.5
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.++.+++.+. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.++...+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45788888885 6776554 88999999999999988999999999999999999998666677899999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCch
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~ 263 (710)
++++..+..|..+++|++|+|++|.++ .+|..+..++ +|++|++++|++++..+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~------------------------~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLT------------------------HLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCT------------------------TCSEEECCSSCCCCCCTT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCC------------------------CCCEEECCCCcCCccCHH
Confidence 999877777889999999999999887 5565555544 455555555555544444
Q ss_pred hccCCCCCcEEEccccccCCCC
Q 005177 264 ELSNLTKLESLFLFRNQLAGQV 285 (710)
Q Consensus 264 ~l~~l~~L~~L~L~~n~l~~~~ 285 (710)
.+..+++|+.|++++|.+....
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTTB
T ss_pred HHhCCCCCCEEEeeCCCccCCc
Confidence 4556666666666666665443
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=7.4e-20 Score=213.05 Aligned_cols=223 Identities=17% Similarity=0.249 Sum_probs=103.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCC---------CCChhhcCCCCCCEEECCCCCCCcCCchhccC
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG---------HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 171 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~ 171 (710)
+.++.|+|++|.+.. +|..+ |+.++|+.|.+.+ ..|..+..+++|+.|+|++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 457889999998875 34433 3334444444332 44667788888888888888887 67777778
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhc
Q 005177 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (710)
Q Consensus 172 L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ 251 (710)
+++|++|+|++|.++ .+|..|++|++|++|+|++|.++ .+|..++.|++|++|+|++|.++ .+|..++++++|++|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ 322 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLG 322 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEE
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEe
Confidence 888888888888888 77888888888888888888887 67777777777777777777765 6666677777777777
Q ss_pred cccccCCccCchhccCCCC-CcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCc
Q 005177 252 IAGANLSGSIPKELSNLTK-LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (710)
Q Consensus 252 ls~n~l~g~~p~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (710)
|++|.+++.+|..+..+.. +..|+|++|.+++.+|. .|+.|+++.|... -..+ +.+.
T Consensus 323 L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~---~~~~-------------~~l~ 380 (727)
T 4b8c_D 323 VEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEP---QREY-------------DSLQ 380 (727)
T ss_dssp CTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------------------------------
T ss_pred CCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeeccccc---cccc-------------CCcc
Confidence 7777777766666543321 12355666666665553 2344555544110 0111 1333
Q ss_pred ccCCcccCCCCCCcEEeccCCCCCC
Q 005177 331 GTVPESLVQLPSLEILFIWNNYFSG 355 (710)
Q Consensus 331 g~~p~~~~~l~~L~~L~L~~N~l~g 355 (710)
+..+..+..+..+....+++|-+.+
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ---------------------CCCG
T ss_pred ccccchhhcccccceeeeecccccc
Confidence 3444455666777778888887763
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=1.2e-18 Score=177.14 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=104.2
Q ss_pred hhhhhcCCCCCccEEEEc-CCCcE--EEEEEeeccchh-------------------------HHHHHHHHHHHhccCCC
Q 005177 450 ECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGATR-------------------------IKIVSEFITRIGTVRHK 501 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~-~~g~~--vAvK~l~~~~~~-------------------------~~~~~~e~~~l~~l~H~ 501 (710)
..+.||+|+||.||+|.. .+|+. ||||.++..... ...+.+|++.+.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999997 78999 999987543111 13578899999999988
Q ss_pred Cc--eeEEEEEEcCCceeEEEeecCC-C----ChhhhhhcCCCHHHHHHHHHHHHHHHHHHh-cCCCCCceecCCCCCCe
Q 005177 502 NL--IRLLGFCYNRHQAYLLYDYLPN-G----NLSEKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASNI 573 (710)
Q Consensus 502 ni--v~l~g~~~~~~~~~lv~Ey~~~-g----sL~~~l~~~~~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlk~~Ni 573 (710)
++ ...+++ +..++||||+.+ | +|.++... .++.....++.|++.||.||| +. +|+||||||+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~NI 202 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEYNI 202 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTSE
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHE
Confidence 64 334432 367899999942 4 56555432 224456789999999999999 87 999999999999
Q ss_pred EecCCCceEEcccCccccc
Q 005177 574 VFDENMEPHLAEFGFKYLT 592 (710)
Q Consensus 574 Ll~~~~~~kl~DfGla~~~ 592 (710)
|++. .++|+|||+|...
T Consensus 203 Ll~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 203 MYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp EESS--SEEECCCTTCEET
T ss_pred EEcC--cEEEEECcccccC
Confidence 9998 9999999998654
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.7e-18 Score=167.10 Aligned_cols=132 Identities=20% Similarity=0.282 Sum_probs=71.6
Q ss_pred cCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCe
Q 005177 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201 (710)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 201 (710)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45556666666666665 344 4666666666666666543 2335666666666666666666555666666666666
Q ss_pred EEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 202 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
|++++|.+++..|..++.+++|++|++++|.+.+.+| .+..+++|++|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCc
Confidence 6666666655445444444444444444443222222 2333344444444444433
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=4.5e-18 Score=165.56 Aligned_cols=152 Identities=16% Similarity=0.203 Sum_probs=122.6
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 678899999999987 566 6888999999999999765 344788899999999999999887888899999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~ 258 (710)
|++|.+++..|..++.+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 99999988788888999999999999998444566 68888999999999998875 33 5666667777777776654
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=6.3e-17 Score=156.71 Aligned_cols=136 Identities=25% Similarity=0.325 Sum_probs=114.9
Q ss_pred CceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCc-cccCCCCCcEEECcCCCCCCC
Q 005177 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 62 ~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
.|.|..+.|.. +++ +.+|..+ ...|++|+|++|.+++..+. .|.++++|++|+|++|++++.
T Consensus 7 ~C~~~~l~~s~------------~~l-~~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 69 (192)
T 1w8a_A 7 HCEGTTVDCTG------------RGL-KEIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI 69 (192)
T ss_dssp EEETTEEECTT------------SCC-SSCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCB
T ss_pred EECCCEEEcCC------------CCc-CcCccCC----CCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCc
Confidence 46776666654 344 3455544 34799999999999876664 488999999999999999999
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (710)
.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.+..+
T Consensus 70 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 89999999999999999999998888889999999999999999999999999999999999999999887654
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.1e-17 Score=158.93 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=120.1
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCCh-hhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
+++++++|.++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999995 78876654 899999999999987765 489999999999999999999899999999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999888889999999999999999999999999999999999999998887654
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=9e-18 Score=171.24 Aligned_cols=170 Identities=24% Similarity=0.302 Sum_probs=111.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
+.++..++|++|.+++. + .+..+++|++|++++|+++. +| .+..+++|++|+|++|.+++..| +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 44567778888888743 3 57788888888888888874 45 67888888888888888886444 88888888888
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g 259 (710)
|++|++++ +|.. .. ++|+.|++++|.+++. | .+..+++ |+.|++++|++++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~------------------------L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKN------------------------LEILSIRNNKLKS 142 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTT------------------------CCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCccc------------------------ccEEECCCCcCCC
Confidence 88888875 4432 23 7888888888887652 2 3444444 4444444444443
Q ss_pred cCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCC
Q 005177 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308 (710)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (710)
. + .+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred C-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 2 344555555555555555543 3445555566666665555543
No 376
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.5e-17 Score=169.57 Aligned_cols=171 Identities=18% Similarity=0.278 Sum_probs=117.5
Q ss_pred CCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
++.+++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4666777888888887543 5778888888888888887 355 67788888888888888875433 7788888888
Q ss_pred EecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccC
Q 005177 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
++++|++++ +|. +.. ++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~-------------------------~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-------------------------IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp ECCSSCCSC-CTT-------------------------CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCc-------------------------ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCC
Confidence 888887764 221 111 4566667777766642 2 4666777777777777776
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCccc
Q 005177 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGT 332 (710)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 332 (710)
+. + .+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 53 2 466667777777777777654 4566666666666666666543
No 377
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=9.8e-16 Score=146.16 Aligned_cols=137 Identities=23% Similarity=0.302 Sum_probs=112.9
Q ss_pred CCceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCC
Q 005177 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (710)
Q Consensus 61 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (710)
..|+|.++.|+.. ++. .+|..+ .+.|++|+|++|.+++..+..|.++++|++|+|++|++++.
T Consensus 5 C~C~~~~l~~~~~------------~l~-~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (177)
T 2o6r_A 5 CSCSGTEIRCNSK------------GLT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSL 67 (177)
T ss_dssp CEEETTEEECCSS------------CCS-SCCTTC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CEeCCCEEEecCC------------CCc-cCCCCC----CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEe
Confidence 3488999999752 121 233322 46799999999999876666788999999999999999987
Q ss_pred CChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCc
Q 005177 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (710)
Q Consensus 141 ~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (710)
.+..|..+++|++|++++|.+++..+..+.++++|++|+|++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 77778999999999999999998777778999999999999999997666667889999999999998886544
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.2e-16 Score=147.86 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=104.7
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 457899999999998 78888888999999999999999876 678889999999999999998788888889999999
Q ss_pred EccCCCCCCC-CCcccCCCCCCCeEEecCCcCCCCCc---ccccccccccccccc
Q 005177 179 NLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIG 229 (710)
Q Consensus 179 ~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~ 229 (710)
++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9999998863 34778888889999998888876544 355666666666553
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.3e-16 Score=149.12 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=100.7
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
.+.|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888899988887 67888888888888888888888865 678888888888888888887788888888888888
Q ss_pred EccCCCCCCCC-CcccCCCCCCCeEEecCCcCCCCCc---ccccccccccccccccccc
Q 005177 179 NLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 179 ~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~~n~~ 233 (710)
+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|+++.|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 88888887532 2678888888888888888775433 2455555555555554443
No 380
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=4.8e-17 Score=171.67 Aligned_cols=282 Identities=15% Similarity=0.085 Sum_probs=132.8
Q ss_pred CCCCcEEECCCCcCcccCCccccC-CCCCcEEECcCCCCC--CCCChhhcCCCCCCEEECCCCCCCcCCchhccC-----
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFN-LTSLISLDISRNNFS--GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ----- 171 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~----- 171 (710)
+++++.|.++++- .+.--..+.. +++|++|||++|++. ...+. .++.++.+++..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhccccccc
Confidence 5568888887542 1111122333 778888888888877 22222 2222444444444322 234444
Q ss_pred ---CCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccc----cccCCccccCC
Q 005177 172 ---LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY----QGNIPWQLGNM 244 (710)
Q Consensus 172 ---L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~----~g~~p~~l~~l 244 (710)
+++|+.|+|.+ .++..-+..|.++++|+.|++++|.+....+..|....++..+..+.+.. ..--...+.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 77777777777 66655556677777777777777777655555666655555554443211 00001122233
Q ss_pred Cccc-hhccccccCCccCchhc----cCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCC
Q 005177 245 SEVQ-YLDIAGANLSGSIPKEL----SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319 (710)
Q Consensus 245 ~~L~-~L~ls~n~l~g~~p~~l----~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 319 (710)
.+|+ .+++... +.++..+ ....++..+.+.++-...........+++|+.|+|++|+++...+..|.++++|
T Consensus 176 ~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L 252 (329)
T 3sb4_A 176 EPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL 252 (329)
T ss_dssp CCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC
T ss_pred cccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC
Confidence 3333 2222111 1111111 112333444433321110000001124455555555555544334445555555
Q ss_pred CEEEcccccCcccCCcccCCCCCCc-EEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeE
Q 005177 320 RLLSLMYNEMSGTVPESLVQLPSLE-ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394 (710)
Q Consensus 320 ~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l 394 (710)
+.++|.+| ++..-+..|..+++|+ .+++.+ .++..-+..+.+|++|+.++++.|+++.--+..|.++.+|+.+
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 55555554 4433334455555555 555554 3443333455555555555555555553333344445555544
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=2.6e-15 Score=145.33 Aligned_cols=111 Identities=25% Similarity=0.323 Sum_probs=98.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
.+.|++|+|++|.++ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 30 ~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 30 PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108 (193)
T ss_dssp CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEE
Confidence 357899999999997 7788899999999999999999988888899999999999999999988888899999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
|++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 109 LHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999987666678889999999999988754
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.6e-16 Score=147.08 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=96.5
Q ss_pred CCCCCcEEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCe
Q 005177 123 NLTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEF 201 (710)
Q Consensus 123 ~l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 201 (710)
..++|++|+|++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478889999999887 77888888888888888888888865 67888888888888888888777777777888888
Q ss_pred EEecCCcCCCCC-cccccccccccccccccccccccCCccccCCCccchhccccccCCccCc---hhccCCCCCcEEEcc
Q 005177 202 LHLAGNLLNDQI-PAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP---KELSNLTKLESLFLF 277 (710)
Q Consensus 202 L~L~~N~l~~~~-p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p---~~l~~l~~L~~L~L~ 277 (710)
|++++|.+++.. +..+.. +++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 100 L~Ls~N~l~~~~~~~~l~~------------------------l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 155 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKK------------------------LECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGY 155 (168)
T ss_dssp EECBSSSCCSSGGGGGGSS------------------------CSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTE
T ss_pred EeccCCccCcchhHHHHhc------------------------CCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCC
Confidence 888888876531 134444 4555555555555554433 345566666666666
Q ss_pred ccccC
Q 005177 278 RNQLA 282 (710)
Q Consensus 278 ~n~l~ 282 (710)
+|.+.
T Consensus 156 ~n~~~ 160 (168)
T 2ell_A 156 DREDQ 160 (168)
T ss_dssp ETTSC
T ss_pred CCChh
Confidence 66554
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=2.1e-15 Score=146.02 Aligned_cols=128 Identities=23% Similarity=0.304 Sum_probs=110.9
Q ss_pred cEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCC
Q 005177 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (710)
Q Consensus 104 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n 183 (710)
+.+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34666677765 5676553 68999999999998 67889999999999999999999888889999999999999999
Q ss_pred CCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc
Q 005177 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
++++..|..|.++++|++|+|++|.++...+..+..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999888899999999999999999997666678888888888888887654
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=2.8e-15 Score=142.99 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=111.9
Q ss_pred CcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccC
Q 005177 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (710)
Q Consensus 103 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 182 (710)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|+.+++|++|++++|.+++..+..+.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467899999987 566544 37899999999999987777889999999999999999977777789999999999999
Q ss_pred CCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99998777788999999999999999986555556778888888888887766543
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.6e-16 Score=144.61 Aligned_cols=109 Identities=19% Similarity=0.270 Sum_probs=79.7
Q ss_pred CCCCcEEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeE
Q 005177 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (710)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 77888788888888888888888765 667888888888888888887777777778888888
Q ss_pred EecCCcCCCC-Cccccccccccccccccccccc
Q 005177 203 HLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 203 ~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~~~ 234 (710)
++++|.+++. .|..++.+++|++|++++|.++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 8888877652 2344444444444444444444
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=7.7e-16 Score=162.40 Aligned_cols=261 Identities=13% Similarity=0.085 Sum_probs=175.3
Q ss_pred CCCCcEEECCCCcCc--ccCCccccCCCCCcEEECcCCCCCCCCChhhcC--------CCCCCEEECCCCCCCcCCchhc
Q 005177 100 FNELVDLNLSHNSFS--GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS--------LRNLLVLDAFSNSFSGSVPAEI 169 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~--------L~~L~~L~L~~N~l~~~~p~~~ 169 (710)
+++|+.|||++|++. ...+. .++.++.+.+..|.+ .+..|.+ +++|+.|+|.+ .++..-+..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999987 22222 223355666666532 2345666 99999999998 7876667789
Q ss_pred cCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCc----CCCCCccccccccccc-ccccccccccccCCccc---
Q 005177 170 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----LNDQIPAELGMLKTVT-HMEIGYNFYQGNIPWQL--- 241 (710)
Q Consensus 170 ~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~l~~l~~L~-~L~l~~n~~~g~~p~~l--- 241 (710)
.++++|+.|++++|.++...+..|.++.++..+.+..+. ....-+..+..+..|+ .+.+... +.++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCC---CcHHHHHhhc
Confidence 999999999999999887777888888777777665532 1112222333444444 2222111 1111111
Q ss_pred -cCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCC
Q 005177 242 -GNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320 (710)
Q Consensus 242 -~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 320 (710)
-...+++.+.+.++-...........+++|+.|++++|+++...+..|.++++|+.|++++| +...-+..|.++++|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 12233444444433111111111123788999999998888777778889999999999887 7666667889999999
Q ss_pred -EEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEEC
Q 005177 321 -LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372 (710)
Q Consensus 321 -~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~l 372 (710)
.+++.+ +++..-+..|..+++|+.+++++|.++..-+..+.++++|+.++.
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999987 677666788899999999999999988666678888999988764
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=2.1e-16 Score=167.05 Aligned_cols=133 Identities=9% Similarity=0.032 Sum_probs=96.2
Q ss_pred chhhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch---------------hHHH--------HHHHHHHHhccCCCCce
Q 005177 448 STECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------------RIKI--------VSEFITRIGTVRHKNLI 504 (710)
Q Consensus 448 ~~~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~---------------~~~~--------~~~e~~~l~~l~H~niv 504 (710)
+.....||+|++|.||+|..++|+.||||.++.+.. .... ..+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 347789999999999999999999999998764210 0111 23455566666444332
Q ss_pred eEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-----
Q 005177 505 RLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----- 579 (710)
Q Consensus 505 ~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~----- 579 (710)
-..-+.. ...+|||||+++++|.++... +....++.|++.||.|||+. +||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d~ 247 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV----PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAEDP 247 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSCT
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc----HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcccc
Confidence 1111111 234799999999888766432 23456789999999999998 999999999999999876
Q ss_pred -----ceEEcccCcc
Q 005177 580 -----EPHLAEFGFK 589 (710)
Q Consensus 580 -----~~kl~DfGla 589 (710)
.+.|+||+-+
T Consensus 248 ~~~~~~~~iID~~Q~ 262 (397)
T 4gyi_A 248 SSITLTPIIIXFPQM 262 (397)
T ss_dssp TSEEEEEEECCCTTC
T ss_pred cccccceEEEEeCCc
Confidence 3889999843
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=4.1e-17 Score=158.85 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=76.8
Q ss_pred CCCCcEEECCCCcCcccCCc------cccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCC
Q 005177 100 FNELVDLNLSHNSFSGQFPV------EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~ 173 (710)
...++.++++.+.+.|.+|. .+.++++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 45566666666666666665 66666677777777776665 45 5666666666666666666 4566666666
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCc-cccccccccccccccccccc
Q 005177 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQ 234 (710)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~ 234 (710)
+|++|+|++|++++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 66666666666664 33 45566666666666666553211 23344444444444444433
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=7.6e-17 Score=156.95 Aligned_cols=150 Identities=21% Similarity=0.309 Sum_probs=95.8
Q ss_pred ccCCCCCcEEECcCCCCCCCCCh------hhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccC
Q 005177 121 IFNLTSLISLDISRNNFSGHFPG------GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~------~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~ 194 (710)
+.....++.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888888877776 67777777777777777775 56 6777777777777777776 4666666
Q ss_pred CCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCc-hhccCCCCCcE
Q 005177 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLES 273 (710)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p-~~l~~l~~L~~ 273 (710)
.+++|++|++++|.+++ +| .+..+++ |++|++++|++++..+ ..+..+++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~------------------------L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVN------------------------LRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHH------------------------SSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCC------------------------CCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 66777777777777664 33 3444444 4455555555443211 24555666666
Q ss_pred EEccccccCCCCCcc----------ccCCCCCCEEE
Q 005177 274 LFLFRNQLAGQVPWE----------FSRVTTLKSLD 299 (710)
Q Consensus 274 L~L~~n~l~~~~p~~----------~~~l~~L~~L~ 299 (710)
|++++|.+++.+|.. +..+++|+.||
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 666666665544332 55666666665
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2e-14 Score=136.89 Aligned_cols=106 Identities=20% Similarity=0.163 Sum_probs=54.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCC-CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
...|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..++.+++|++|+|++|.+++..|..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3455556666655552 332 33333 555555555555543 345555555555555555554333333555555555
Q ss_pred EccCCCCCCCCCc--ccCCCCCCCeEEecCCcCC
Q 005177 179 NLAGSYFSGPIPS--QFGSFKSLEFLHLAGNLLN 210 (710)
Q Consensus 179 ~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~ 210 (710)
+|++|.++ .+|. .+..+++|+.|++++|.++
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 55555553 3343 4555555555555555543
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.2e-13 Score=130.62 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=67.1
Q ss_pred EEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCC
Q 005177 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (710)
Q Consensus 105 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~ 184 (710)
.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4455555554 3454442 566666666666666666666667777777777777665555556677777777777777
Q ss_pred CCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 185 FSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+++..+..|.++++|++|+|++|.+..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 776555567777777777777776654
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.3e-14 Score=136.53 Aligned_cols=133 Identities=19% Similarity=0.127 Sum_probs=99.3
Q ss_pred cccCCCCCcEEECcCCCCCCCCChhhcCCC-CCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCC
Q 005177 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLR-NLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKS 198 (710)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~ 198 (710)
.+.++++|++|++++|+++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|.+++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46677888888888888874 454 44444 888888888888864 56788888888888888888654444578888
Q ss_pred CCeEEecCCcCCCCCcc--cccccccccccccccccccccCCcc----ccCCCccchhccccccCC
Q 005177 199 LEFLHLAGNLLNDQIPA--ELGMLKTVTHMEIGYNFYQGNIPWQ----LGNMSEVQYLDIAGANLS 258 (710)
Q Consensus 199 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~l~~n~~~g~~p~~----l~~l~~L~~L~ls~n~l~ 258 (710)
|++|++++|.++ .+|. .+..+++|+.|++++|.+. .+|.. +..+++|++||++.|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888884 4565 6778888888888888876 44553 777888888888887654
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=2.2e-13 Score=129.32 Aligned_cols=104 Identities=23% Similarity=0.222 Sum_probs=72.1
Q ss_pred EEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCC
Q 005177 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (710)
Q Consensus 105 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~ 184 (710)
.+++++|.+. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666663 5555543 667777777777777667777777777777777777776555556777777777777777
Q ss_pred CCCCCCcccCCCCCCCeEEecCCcCCC
Q 005177 185 FSGPIPSQFGSFKSLEFLHLAGNLLND 211 (710)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (710)
+++..+..|..+++|++|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 776555557777777777777777653
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.46 E-value=1.6e-12 Score=140.34 Aligned_cols=263 Identities=10% Similarity=0.001 Sum_probs=140.1
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
..++.+.+.++ ++..-+..|.++ +|+.++|..| ++..-...|.+. +|+.+++.. .++..-+..|.++++|+.++|
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 45555555442 332333445553 5777776655 554445555553 567776664 455444556666777777777
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
+.|+++......|. ..+|+.+.+.++ +...-...|..+++|+.+ ++..+ ++..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l------------------------~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTI------------------------EIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCE------------------------ECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEE------------------------ecCCC-ccCc
Confidence 66666644344444 466666666533 333333334444444444 44432 2222
Q ss_pred CchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCC-----CCCCccccCCCCCCEEEcccccCcccCCc
Q 005177 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-----GPIPESFADLKNLRLLSLMYNEMSGTVPE 335 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 335 (710)
-...|.+ .+|+.+.+ .+.++...+..|.++++|+.+++.+|.+. ...+..|.+|++|+.++|. +.++..-..
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 2233433 45666666 33344344455666666666666655543 2234556666677777666 335544445
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCC-CceeeEecccCC
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSG-GVLFKLILFSNN 400 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~-~~L~~l~l~~N~ 400 (710)
.|..+++|+.+.|..| ++..-+..+.++ +|+.+++++|.+....+..+..+ ..+..+.+-.|.
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 6666677777776443 443334556666 67777777766653333333333 345566665543
No 395
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.43 E-value=2.9e-12 Score=138.29 Aligned_cols=242 Identities=7% Similarity=0.060 Sum_probs=175.6
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
.+|+.++|..| ++..-..+|.+ .+|+.++|.. .+...-+..|.++++|+.+++..|+++..-...|. ..+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 47999999877 66444556777 4799999986 67767778899999999999999999855455555 699999999
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~ 260 (710)
..+ ++..-...|.++++|+.+++..| ++..-...|. + .+|+.+++ .++++..
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~------------------------~-~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFR------------------------E-SGITTVKL-PNGVTNI 262 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTT------------------------T-CCCSEEEE-ETTCCEE
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccc------------------------c-CCccEEEe-CCCccEE
Confidence 854 76666778999999999999875 3221112222 2 34555555 3344444
Q ss_pred CchhccCCCCCcEEEccccccC-----CCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccccCcccCCc
Q 005177 261 IPKELSNLTKLESLFLFRNQLA-----GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335 (710)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~n~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 335 (710)
-...|.++++|+.+++.+|.+. ...+..|.++++|+.+++. +.+...-...|.+|++|+.+.|..| ++..-+.
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4556777888888888777654 2345678888888988888 4466555677888899999998654 6655567
Q ss_pred ccCCCCCCcEEeccCCCCCCCCCcccCCCC-CCcEEECCCCcC
Q 005177 336 SLVQLPSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNF 377 (710)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~-~L~~L~ls~N~l 377 (710)
.|..+ +|+.+++++|.+....+..+..++ ++..+.+..|.+
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 78888 899999998887755556666663 677888776654
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=7.5e-13 Score=125.17 Aligned_cols=107 Identities=22% Similarity=0.286 Sum_probs=93.5
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (710)
.+.+++++|.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999985 676653 8999999999999998899999999999999999999987777889999999999999
Q ss_pred CcCCCCCccccccccccccccccccccccc
Q 005177 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (710)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~ 236 (710)
|++++..|..+..+++|++|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999977666788888888888888877654
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=1.5e-12 Score=123.53 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=91.2
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (710)
-+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 6777664 8999999999999998899999999999999999999987666789999999999999
Q ss_pred CcCCCCCcccccccccccccccccccccc
Q 005177 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (710)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~~~g 235 (710)
|++++..+..+..+++|++|++++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99986655568888888888888887664
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=5.5e-12 Score=133.76 Aligned_cols=89 Identities=19% Similarity=0.155 Sum_probs=43.2
Q ss_pred ccCCCCCcEEECcC-CCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCC
Q 005177 121 IFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L 199 (710)
+..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444555555555555555544444455555555555555555543333333333 5
Q ss_pred CeEEecCCcCC
Q 005177 200 EFLHLAGNLLN 210 (710)
Q Consensus 200 ~~L~L~~N~l~ 210 (710)
+.|+|.+|.+.
T Consensus 106 ~~l~l~~N~~~ 116 (347)
T 2ifg_A 106 QELVLSGNPLH 116 (347)
T ss_dssp CEEECCSSCCC
T ss_pred eEEEeeCCCcc
Confidence 55555555544
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=6.7e-12 Score=133.05 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=92.4
Q ss_pred ceeeeeeeCCCCCcEEEEEcCCCCCcccCCcchhhhcCCCCcEEECCC-CcCcccCCccccCCCCCcEEECcCCCCCCCC
Q 005177 63 CSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHF 141 (710)
Q Consensus 63 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (710)
|.|..|.|... +++.+ +|. +.. +++|+.|+|++ |.|++..|..|.++++|++|+|++|+|++..
T Consensus 8 C~~~~v~~~~~-----------n~l~~-ip~-l~~--~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALDS-LHH-LPG--AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECCSS-----------CCCTT-TTT-SCS--CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcCCC-----------CCCCc-cCC-CCC--CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeC
Confidence 88887877641 13443 666 666 88999999996 9999888888999999999999999999999
Q ss_pred ChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCCCC
Q 005177 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187 (710)
Q Consensus 142 p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l~~ 187 (710)
|..|.+|++|++|||++|+|++..|..+..++ |++|+|++|.+..
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999999999999999976666666666 9999999999875
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=1.8e-13 Score=146.39 Aligned_cols=187 Identities=14% Similarity=0.122 Sum_probs=115.2
Q ss_pred CCCCcEEECCCCcCcccCCccccC-----CCCCcEEECcCCCCCCCCChhh-cCCCCCCEEECCCCCCCcCCchhc----
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFN-----LTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI---- 169 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~l-~~L~~L~~L~L~~N~l~~~~p~~~---- 169 (710)
++.|+.|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 568999999999987544444332 3689999999998875433333 346788999999998875433333
Q ss_pred -cCCCCCCEEEccCCCCCC----CCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCC
Q 005177 170 -SQLEHLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244 (710)
Q Consensus 170 -~~L~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l 244 (710)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++..-.. .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 346788888888888864 2344456677888888888876532100 112233444
Q ss_pred CccchhccccccCCcc----CchhccCCCCCcEEEccccccCCCCCccccCC---C--CCCEEE--ccCCCCC
Q 005177 245 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAGQVPWEFSRV---T--TLKSLD--LSDNRLS 306 (710)
Q Consensus 245 ~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l---~--~L~~L~--Ls~N~l~ 306 (710)
++|+.|+|++|.++.. ++..+...++|++|+|++|.++......+..+ . .|+.+. +..|.++
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 5677777777776532 33444556778888888888765333333222 1 155665 5555544
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.13 E-value=1e-12 Score=140.38 Aligned_cols=167 Identities=16% Similarity=0.088 Sum_probs=113.6
Q ss_pred CCCCcEEECcCCCCCCCCChhhcC-----CCCCCEEECCCCCCCcCCchhc-cCCCCCCEEEccCCCCCCCCCccc----
Q 005177 124 LTSLISLDISRNNFSGHFPGGIQS-----LRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQF---- 193 (710)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~p~~l~~-----L~~L~~L~L~~N~l~~~~p~~~-~~L~~L~~L~L~~n~l~~~~p~~~---- 193 (710)
++.|++|+|++|.++......+.. .++|+.|||++|.++......+ ..+++|+.|+|++|.++..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467899999999987654444433 2689999999998875333222 345678888888888864332333
Q ss_pred -CCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc----CchhccCC
Q 005177 194 -GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNL 268 (710)
Q Consensus 194 -~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~----~p~~l~~l 268 (710)
...++|+.|+|++|.++..-.. .++..+...++|++|+|++|.++.. ++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 2456788888888776531100 1222344566777888888877642 35567778
Q ss_pred CCCcEEEccccccCCC----CCccccCCCCCCEEEccCCCCCCCCC
Q 005177 269 TKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGPIP 310 (710)
Q Consensus 269 ~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p 310 (710)
++|+.|+|++|.++.. ++..+...++|++|+|++|.++..-.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHH
Confidence 8999999999999753 23345567899999999999876433
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.11 E-value=1.5e-10 Score=117.49 Aligned_cols=137 Identities=17% Similarity=0.042 Sum_probs=106.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGN 527 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gs 527 (710)
.....+.|+.+.||++... |..+++|...... .....+.+|++.++.++ |..+.++++++.+.+..|+||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 4456677778889999854 6789999987532 22345788889888875 6778889999988889999999999999
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------------
Q 005177 528 LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------------ 559 (710)
Q Consensus 528 L~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------------ 559 (710)
+.+.... ......++.+++++++.||+..
T Consensus 97 l~~~~~~---~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (263)
T 3tm0_A 97 CSEEYED---EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDF 173 (263)
T ss_dssp HHHHCCT---TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHH
T ss_pred hhhccCC---cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHH
Confidence 8876421 1234578889999999999810
Q ss_pred --------CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 560 --------YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 560 --------~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+.++|+|+++.||+++++..+.|.||+.+.
T Consensus 174 l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 174 LKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799998653
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=2.5e-10 Score=115.44 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=98.1
Q ss_pred cCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc--eeEEEEEEcCCceeEEEeecCCCChhhhh
Q 005177 455 ARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGFCYNRHQAYLLYDYLPNGNLSEKI 532 (710)
Q Consensus 455 g~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~lv~Ey~~~gsL~~~l 532 (710)
+.|..+.||++...+|..++||..... ....+.+|++.++.+++.++ .+++++...++..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 345568999998888888999997654 23457788888888865554 45888888888899999999998884 2
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------------------
Q 005177 533 RTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------------------- 559 (710)
Q Consensus 533 ~~~~~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------------------- 559 (710)
. ..+ +..++.++++.+..||+..
T Consensus 105 ~-~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 105 S-HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp S-CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred C-cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 2 122 3367788888888888742
Q ss_pred --CCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 560 --YPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 560 --~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
.+.++|+|++|.||+++++..+.|.|||.+..
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999997643
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.09 E-value=3.4e-09 Score=114.27 Aligned_cols=284 Identities=13% Similarity=0.017 Sum_probs=141.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCch------------
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA------------ 167 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~------------ 167 (710)
.++|+.+.|..+ ++..-..+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+ +...-..
T Consensus 70 c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 70 CRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp CTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 467888888644 55444556778888888888654 55444556777777777666543 2212222
Q ss_pred ----------hccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccC
Q 005177 168 ----------EISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNI 237 (710)
Q Consensus 168 ----------~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~ 237 (710)
.|.++++|+.+.+.++. ...-...|.++.+|+.+.+..| +...-...+.....|+.+.+..+... +
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i 222 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--L 222 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--E
T ss_pred CccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--e
Confidence 34444455555444332 1122334444445554444433 22222223333444444433322111 0
Q ss_pred CccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 238 PWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 238 p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
.......++|+.+.+..+ ++..-...+..+..|+.+.+..+... .....|..+..++.+....+.+ ....|..+.
T Consensus 223 ~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~ 297 (394)
T 4fs7_A 223 GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCS 297 (394)
T ss_dssp CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCT
T ss_pred ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccc
Confidence 011111223333333211 11111223445556666665544321 2233455555566555544332 123466667
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeEecc
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILF 397 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l~l~ 397 (710)
+|+.+.+..+ ++..-...|..+.+|+.+++.++ ++..-...+.+|.+|+.+++..| ++.--...|.++.+|+.+.+.
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 7777777544 44333455667777777777543 44333456667777777777655 442223355566777777665
Q ss_pred c
Q 005177 398 S 398 (710)
Q Consensus 398 ~ 398 (710)
.
T Consensus 375 ~ 375 (394)
T 4fs7_A 375 K 375 (394)
T ss_dssp G
T ss_pred C
Confidence 4
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.01 E-value=1.4e-08 Score=109.46 Aligned_cols=280 Identities=13% Similarity=0.007 Sum_probs=191.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCC---------------------CCCCCChhhcCCCCCCEEECCC
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---------------------FSGHFPGGIQSLRNLLVLDAFS 158 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---------------------l~~~~p~~l~~L~~L~~L~L~~ 158 (710)
+++|+.++|..+ ++..-...|.++++|+.+.+..+- ........|.++++|+.+.+..
T Consensus 93 c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~ 171 (394)
T 4fs7_A 93 CSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPD 171 (394)
T ss_dssp CTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred CCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCccccccchhhhcccCCCcEEecCC
Confidence 678999999865 443334567778888777665431 1112234578899999999976
Q ss_pred CCCCcCCchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCC
Q 005177 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (710)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p 238 (710)
+. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+.. .+........+|+.+.+..+. ..--.
T Consensus 172 ~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~--~i~~~~~~~~~l~~i~ip~~~-~~i~~ 246 (394)
T 4fs7_A 172 SM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY--YLGDFALSKTGVKNIIIPDSF-TELGK 246 (394)
T ss_dssp TC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC--EECTTTTTTCCCCEEEECTTC-CEECS
T ss_pred cc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce--EeehhhcccCCCceEEECCCc-eeccc
Confidence 54 3344667889999999999876 5545566788999999988876543 222333344566666554321 11112
Q ss_pred ccccCCCccchhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 005177 239 WQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN 318 (710)
Q Consensus 239 ~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 318 (710)
..+..+..|+.+.+..+... .....+..+..++.+....+.+. ...|..+.+|+.+.+..+ +...-...|.++++
T Consensus 247 ~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~ 321 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTS 321 (394)
T ss_dssp STTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCC
Confidence 34566778888887766433 44556778888998887766432 345778899999999765 55444567999999
Q ss_pred CCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCcccccCCCceeeE
Q 005177 319 LRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKL 394 (710)
Q Consensus 319 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip~~~~~~~~L~~l 394 (710)
|+.+++..+ ++..-...|.++.+|+.+.+..| ++..-...+.+|.+|+.+++..+- + .+...+.++++|+.+
T Consensus 322 L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~~-~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 322 LVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKRL-E-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGGG-G-GGGGGBCTTCEEEEE
T ss_pred CCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCCC-E-EhhheecCCCCCcEE
Confidence 999999754 65445678889999999999876 654445678899999999997552 2 345567777777654
No 406
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.3e-09 Score=116.02 Aligned_cols=141 Identities=15% Similarity=0.214 Sum_probs=106.7
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEee--ccc--hhHHHHHHHHHHHhccC--CCCceeEEEEEEcC---CceeEEE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIE--WGA--TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNR---HQAYLLY 520 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~--~~~--~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ 520 (710)
..+.++.|.++.+|+....+ ..+++|+.. .+. .....+.+|.++++.++ +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34567889999999998765 568888876 432 12446778888888887 45678899998776 4589999
Q ss_pred eecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 005177 521 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------- 559 (710)
Q Consensus 521 Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------- 559 (710)
||+++..+.+.....++..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 999998886544445678888899999999999999731
Q ss_pred --------------CCCceecCCCCCCeEecCCCc--eEEcccCcccc
Q 005177 560 --------------YPAIPHGDLKASNIVFDENME--PHLAEFGFKYL 591 (710)
Q Consensus 560 --------------~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~ 591 (710)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998754
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.92 E-value=7.8e-12 Score=125.93 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=82.5
Q ss_pred CceeeeeeeCCCCCcEEEEEcCC---CCCcccCCcch-hhh-------cCCCCcEEECCCCcCcccCCccccCCCCCcE-
Q 005177 62 ACSWSGVKCNKNNTIVVGINLSM---KGLSGALPGKP-LRI-------FFNELVDLNLSHNSFSGQFPVEIFNLTSLIS- 129 (710)
Q Consensus 62 ~C~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~-~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~- 129 (710)
.|.|.|+.|+..+.+|+.+...+ ..+.|.++++. ..+ .-..-+.|||+. +...+.|+.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~~ 146 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVAQ 146 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHHT
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhhc
Confidence 58999999997555554443333 23445555431 110 011233455443 333344444
Q ss_pred -EECcCCCCC---CCCChhhcCCCCCCEEECCCCCCCc--CCchhccCCCCCCEEEccCCCCCCCCCcccCCCC--CCCe
Q 005177 130 -LDISRNNFS---GHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK--SLEF 201 (710)
Q Consensus 130 -L~Ls~N~l~---~~~p~~l~~L~~L~~L~L~~N~l~~--~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~ 201 (710)
++++.|... +.++....++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.
T Consensus 147 ~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 147 NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp TCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred CccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 566666422 2222222467788888888888877 4566777788888888888888754 3344444 7788
Q ss_pred EEecCCcCCCCCc
Q 005177 202 LHLAGNLLNDQIP 214 (710)
Q Consensus 202 L~L~~N~l~~~~p 214 (710)
|+|++|.+.+.+|
T Consensus 225 L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 225 LWLDGNSLCDTFR 237 (267)
T ss_dssp EECTTSTTGGGCS
T ss_pred EEccCCcCccccC
Confidence 8888887776555
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.86 E-value=7.3e-08 Score=103.74 Aligned_cols=287 Identities=12% Similarity=0.103 Sum_probs=149.5
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCCC---CCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEE
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 178 (710)
.|+.+.+..+ ++..-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777654 554445677888888888887664 55444556777778877776544 343445567777888888
Q ss_pred EccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccc---
Q 005177 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGA--- 255 (710)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n--- 255 (710)
.+..+ +...-...|.++.+|+.+.+..+ +. .+......-..|+.+.+..+... .-...+.++.++.......+
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTGTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC
T ss_pred cccce-eeeecccceecccccccccccce-ee-EeccccccccceeEEEECCcccc-cccchhhhccccceecccccccc
Confidence 87643 33334456677777777777654 22 12211111233444433221100 00011122222222111111
Q ss_pred ---------------------------------cCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccC
Q 005177 256 ---------------------------------NLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD 302 (710)
Q Consensus 256 ---------------------------------~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 302 (710)
.++..-...|.++++|+.+.+..+.. ..-...|.++++|+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp BSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-
T ss_pred cccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-
Confidence 11111123455666677776654332 2233456667777777775
Q ss_pred CCCCCCCCccccCCCCCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc
Q 005177 303 NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP 382 (710)
Q Consensus 303 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip 382 (710)
+.+...-...|.++.+|+.+++..+ ++..-...|.++.+|+.+.+..+ ++..-...+.+|++|+.+++.+|....
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--- 371 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--- 371 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---
Confidence 3344333456777777777777643 44333456777777777777543 443334566777777777777665331
Q ss_pred ccccCCCceeeEecccCCc
Q 005177 383 PDICSGGVLFKLILFSNNF 401 (710)
Q Consensus 383 ~~~~~~~~L~~l~l~~N~l 401 (710)
..+.....|+.+.+..|.+
T Consensus 372 ~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 372 NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp HTCBCCCCC----------
T ss_pred hhhhccCCCCEEEeCCCCE
Confidence 2344555666666655543
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=8.9e-10 Score=116.74 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=110.8
Q ss_pred CcEEEEEcCCCCCcc-cC-------CcchhhhcCCCCcEEECCCCcCc---------ccCCccccCCCCCcEEECcCCCC
Q 005177 75 TIVVGINLSMKGLSG-AL-------PGKPLRIFFNELVDLNLSHNSFS---------GQFPVEIFNLTSLISLDISRNNF 137 (710)
Q Consensus 75 ~~v~~l~l~~~~l~g-~~-------~~~~~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l 137 (710)
.+|+.+.+...++.| .. ..+... +++|+.|.+..+... +.++..+..+++|+.|+|++|.-
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~--l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEK--FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHH--HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhh--cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 356677776655553 11 222334 788999988765431 12334455678888888887731
Q ss_pred CCCCChhhcCCCCCCEEECCCCCCCcCCchhcc--CCCCCCEEEccC--CCCCCC-----CCccc--CCCCCCCeEEecC
Q 005177 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS--QLEHLKVLNLAG--SYFSGP-----IPSQF--GSFKSLEFLHLAG 206 (710)
Q Consensus 138 ~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~--~L~~L~~L~L~~--n~l~~~-----~p~~~--~~l~~L~~L~L~~ 206 (710)
. .+|. + .+++|+.|+|..+.++......+. .+++|++|+|+. |...+. +...+ ..+++|++|+|.+
T Consensus 185 l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2333 3 377888888887776543333343 678888888753 221111 01112 2356677777766
Q ss_pred CcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCcc----CchhccCCCCCcEEEccccccC
Q 005177 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLA 282 (710)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~----~p~~l~~l~~L~~L~L~~n~l~ 282 (710)
|.+.+..+..+.. ...+++|++|+|+.|.+++. ++..+..+++|+.|+++.|.++
T Consensus 262 ~~i~~~~~~~la~---------------------a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 262 AEEQNVVVEMFLE---------------------SDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTHHHHHHHHHH---------------------CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCchHHHHHHHh---------------------CccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6654322211110 01345677777777766643 2333345677888888887765
Q ss_pred CCCCccccC-CCCCCEEEccCCC
Q 005177 283 GQVPWEFSR-VTTLKSLDLSDNR 304 (710)
Q Consensus 283 ~~~p~~~~~-l~~L~~L~Ls~N~ 304 (710)
...-..+.. + ...++++.++
T Consensus 321 d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHHc--CCEEEecCCc
Confidence 432222222 1 3567777766
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=1.2e-09 Score=115.74 Aligned_cols=164 Identities=15% Similarity=0.194 Sum_probs=84.3
Q ss_pred CchhccCCCCCCEEEccCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCccccc--cccccccccccc--ccccccCCcc
Q 005177 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGY--NFYQGNIPWQ 240 (710)
Q Consensus 165 ~p~~~~~L~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~--n~~~g~~p~~ 240 (710)
++..+..+++|+.|+|++|.-. .+|. +. +++|+.|++..|.++......+. .+++|++|+|+. |...|.. .
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~ 238 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--D 238 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--C
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--h
Confidence 4445556666777777665211 2232 32 56677777766655432222222 455555555532 1111100 0
Q ss_pred ccCCCccchhccccccCCccCchhc--cCCCCCcEEEccccccCCCCCccc---cCCCCCCEEEccCCCCCCC----CCc
Q 005177 241 LGNMSEVQYLDIAGANLSGSIPKEL--SNLTKLESLFLFRNQLAGQVPWEF---SRVTTLKSLDLSDNRLSGP----IPE 311 (710)
Q Consensus 241 l~~l~~L~~L~ls~n~l~g~~p~~l--~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~ 311 (710)
+ ..+ ...+ ..+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.+.+. ++.
T Consensus 239 ~---~~l--------------~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~ 301 (362)
T 2ra8_A 239 M---NVF--------------RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLD 301 (362)
T ss_dssp G---GGT--------------GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHT
T ss_pred H---HHH--------------HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHh
Confidence 0 000 0111 235677777777776654322222 2456788888888877653 333
Q ss_pred cccCCCCCCEEEcccccCcccCCcccCC-CCCCcEEeccCCC
Q 005177 312 SFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIWNNY 352 (710)
Q Consensus 312 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~L~~N~ 352 (710)
.+..+++|+.|+|++|.++...-..+.. + ...+++++|.
T Consensus 302 ~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 302 HVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp THHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 4455678888888888776443222222 2 3457777765
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.72 E-value=6.9e-09 Score=107.59 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=118.9
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCC--ceeEEEEEEcCC---ceeEEEeecC
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKN--LIRLLGFCYNRH---QAYLLYDYLP 524 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~Ey~~ 524 (710)
.+.++.|....+|+.. ..+++|.-... .....+.+|.+.++.+. +.. +.+.+++....+ ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4457788888888753 45888886533 33566888999988774 333 334444443333 3589999999
Q ss_pred CCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 005177 525 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD---------------------------------------------- 558 (710)
Q Consensus 525 ~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~---------------------------------------------- 558 (710)
|.++.+.....++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (304)
T 3sg8_A 100 GVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRD 179 (304)
T ss_dssp CEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred CeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence 9888765545567777788888888888888851
Q ss_pred ---------CCCCceecCCCCCCeEecC--CCceEEcccCccccccccCC--CCcccccccCch---hhhh-cc------
Q 005177 559 ---------CYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG--SFPAKIAWTESG---EFYN-AM------ 615 (710)
Q Consensus 559 ---------~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~--~~~~~~~~~~~~---e~~~-~~------ 615 (710)
..+.++|+|+++.||++++ ...+.|.||+.+..-..... ...........+ .+.. +.
T Consensus 180 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~ 259 (304)
T 3sg8_A 180 ILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPT 259 (304)
T ss_dssp HHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHH
T ss_pred HHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHH
Confidence 1245899999999999998 45678999998764321000 000000000000 0000 00
Q ss_pred ---CCccccceeeHHHHHHHHHhCCCCCC
Q 005177 616 ---KEEMYMDVYGFGEIILEILTNGRLTN 641 (710)
Q Consensus 616 ---~~~~~~DVySfGvvl~Elltg~~p~~ 641 (710)
+.....+.|++|+++|++.+|..++.
T Consensus 260 ~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 260 VLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11223589999999999999976653
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.64 E-value=1.1e-06 Score=94.34 Aligned_cols=272 Identities=11% Similarity=0.081 Sum_probs=178.0
Q ss_pred CccccCCC-CCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC---CCcCCchhccCCCCCCEEEccCCCCCCCCCccc
Q 005177 118 PVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS---FSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQF 193 (710)
Q Consensus 118 p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~---l~~~~p~~~~~L~~L~~L~L~~n~l~~~~p~~~ 193 (710)
..+|.++. .|+.+.+..+ ++..-..+|.++++|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++..-...|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34566774 5999999754 776677889999999999998774 55444667889999998887654 444455678
Q ss_pred CCCCCCCeEEecCCcCCCCCcccccccccccccccccccccccCCccccCCCccchhccccccCCccCchhccCCCCCcE
Q 005177 194 GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLES 273 (710)
Q Consensus 194 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L~~L~ls~n~l~g~~p~~l~~l~~L~~ 273 (710)
.++.+|+.+.+..+ +...-...+....+|+.+.+..+- . .+........+|+.+.+..+-. ..-...+..+.++..
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~-~-~I~~~aF~~~~l~~i~ip~~~~-~i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSV-T-AIEERAFTGTALTQIHIPAKVT-RIGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCCCSEEEECTTCC-EECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceeccccccccccccee-e-EeccccccccceeEEEECCccc-ccccchhhhccccce
Confidence 89999999999754 333334556677788877765441 1 1211111224566666544321 122334555555555
Q ss_pred EEcccccc------------------------------------CCCCCccccCCCCCCEEEccCCCCCCCCCccccCCC
Q 005177 274 LFLFRNQL------------------------------------AGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLK 317 (710)
Q Consensus 274 L~L~~n~l------------------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 317 (710)
.....+.. +..-...|.++..|+.+.+..+..+ .-...|.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~ 288 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCP 288 (394)
T ss_dssp EEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCT
T ss_pred ecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccc
Confidence 54332211 1111234667788888888765432 3445788889
Q ss_pred CCCEEEcccccCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc-ccccCCCceeeEec
Q 005177 318 NLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP-PDICSGGVLFKLIL 396 (710)
Q Consensus 318 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip-~~~~~~~~L~~l~l 396 (710)
+|+.+.+. +.++..-...|..+.+|+.+++..+ ++..-...+.+|.+|+.+.+..+ ++ .|+ ..|.++.+|+.+++
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~ 364 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEY 364 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEE
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEE
Confidence 99999986 4555444567888999999999765 55334567888999999999654 54 343 46777889999988
Q ss_pred ccCC
Q 005177 397 FSNN 400 (710)
Q Consensus 397 ~~N~ 400 (710)
.+|.
T Consensus 365 ~~~~ 368 (394)
T 4gt6_A 365 SGSR 368 (394)
T ss_dssp SSCH
T ss_pred CCce
Confidence 7764
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=3.5e-08 Score=99.25 Aligned_cols=96 Identities=22% Similarity=0.293 Sum_probs=66.8
Q ss_pred EECCCCcCc---ccCCccccCCCCCcEEECcCCCCCC--CCChhhcCCCCCCEEECCCCCCCcCCchhccCCC--CCCEE
Q 005177 106 LNLSHNSFS---GQFPVEIFNLTSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVL 178 (710)
Q Consensus 106 L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~--~L~~L 178 (710)
++++.|... +.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 566666432 2222223467888888888888887 5567777888888888888888864 3344444 88889
Q ss_pred EccCCCCCCCCCc-------ccCCCCCCCeEE
Q 005177 179 NLAGSYFSGPIPS-------QFGSFKSLEFLH 203 (710)
Q Consensus 179 ~L~~n~l~~~~p~-------~~~~l~~L~~L~ 203 (710)
+|++|.+++.+|. .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9998888876663 255677777765
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43 E-value=6.2e-07 Score=93.50 Aligned_cols=133 Identities=14% Similarity=0.090 Sum_probs=98.0
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCC---C-CceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH---K-NLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.++.|....||+. |..+++|..... .....+.+|.+.+..+++ + .+.+++++ +..++||||++|
T Consensus 41 ~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 41 ELRYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEEeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 5667888999999988 667888877532 224457888888887766 1 23344444 567899999999
Q ss_pred CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCC---------------------------------------------
Q 005177 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCY--------------------------------------------- 560 (710)
Q Consensus 526 gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~--------------------------------------------- 560 (710)
.++.+.....++..++..++.++++.++.||+...
T Consensus 112 ~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
T 3r70_A 112 ERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIET 191 (320)
T ss_dssp BCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred ccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHH
Confidence 88875444455666677778888888888874322
Q ss_pred ---------------CCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 561 ---------------PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 561 ---------------~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+.++|+|++|.||+++.+..+.|.||+.+..
T Consensus 192 ~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 192 IYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999866679999998754
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=3.4e-08 Score=94.34 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=70.7
Q ss_pred CCCCcEEECCCC-cCccc----CCccccCCCCCcEEECcCCCCCCC----CChhhcCCCCCCEEECCCCCCCcC----Cc
Q 005177 100 FNELVDLNLSHN-SFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (710)
Q Consensus 100 l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p 166 (710)
.+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 567888888888 77532 334455677888888888887642 233345557788888888877642 34
Q ss_pred hhccCCCCCCEEEc--cCCCCCCC----CCcccCCCCCCCeEEecCCcC
Q 005177 167 AEISQLEHLKVLNL--AGSYFSGP----IPSQFGSFKSLEFLHLAGNLL 209 (710)
Q Consensus 167 ~~~~~L~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l 209 (710)
..+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 55666677777777 66776532 222334456677777776655
No 416
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.32 E-value=3.2e-05 Score=82.39 Aligned_cols=283 Identities=9% Similarity=0.028 Sum_probs=132.4
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEc
Q 005177 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (710)
Q Consensus 101 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L 180 (710)
.+|+.+.+..+ ++..-..+|.++++|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 45666666542 44333446777778888877643 554445556665 5666665433 33222233333 36777776
Q ss_pred cCCCCCCCCCcccCCCCCCCeEEecCCcCCCCCcccccccccccccccccccccc------------cCCccccCCCccc
Q 005177 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG------------NIPWQLGNMSEVQ 248 (710)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~~~g------------~~p~~l~~l~~L~ 248 (710)
..+- +..-...|.+. +|+.+.+..+ ++..-...+....+++...+..+.... .....+.....+.
T Consensus 121 p~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 5442 21222233332 3444443322 121222223333344333332211100 0001111122222
Q ss_pred hhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEccccc
Q 005177 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (710)
Q Consensus 249 ~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (710)
.+.+... ........+....+|+.+.+..+ +.......|.++..|+.+.+..+ +...-...|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 2222111 11122233444556666665433 22223344556666666666554 33333445666666777666433
Q ss_pred CcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCCcCCccCc-ccccCCCceeeEecc
Q 005177 329 MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIP-PDICSGGVLFKLILF 397 (710)
Q Consensus 329 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N~l~g~ip-~~~~~~~~L~~l~l~ 397 (710)
+...-...|..+++|+.+.+.++.++..-+..+.++.+|+.+++..+ ++ .|+ ..|.++.+|+.+.+.
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 33333345666677777777666665333455666677777776543 33 233 345555666666553
No 417
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25 E-value=4.7e-06 Score=86.17 Aligned_cols=137 Identities=13% Similarity=0.061 Sum_probs=92.1
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCC---CceeEEEEEE-cCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK---NLIRLLGFCY-NRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~Ey~~~ 525 (710)
..+.++.|....+|+. |..++||.-. .......+.+|.+.|..+++. .+.+.++++. ..+..++||||++|
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 3445677777788887 5668888853 223356788999999988753 2456677764 44567899999999
Q ss_pred CChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 005177 526 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD----------------------------------------------- 558 (710)
Q Consensus 526 gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~----------------------------------------------- 558 (710)
..+.+.....++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred eECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 887764322334444444444555544444432
Q ss_pred ----------CCCCceecCCCCCCeEecC---CCc-eEEcccCcccc
Q 005177 559 ----------CYPAIPHGDLKASNIVFDE---NME-PHLAEFGFKYL 591 (710)
Q Consensus 559 ----------~~~~iiHrDlk~~NiLl~~---~~~-~kl~DfGla~~ 591 (710)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999997 455 48999997654
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=1.4e-07 Score=90.00 Aligned_cols=116 Identities=14% Similarity=0.135 Sum_probs=80.4
Q ss_pred CccccCCCCCcEEECcCC-CCCCC----CChhhcCCCCCCEEECCCCCCCcC----CchhccCCCCCCEEEccCCCCCCC
Q 005177 118 PVEIFNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGP 188 (710)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p~~~~~L~~L~~L~L~~n~l~~~ 188 (710)
...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345667899999999999 88642 344566778999999999998742 345566678899999999998743
Q ss_pred ----CCcccCCCCCCCeEEe--cCCcCCCCC----cccccccccccccccccccc
Q 005177 189 ----IPSQFGSFKSLEFLHL--AGNLLNDQI----PAELGMLKTVTHMEIGYNFY 233 (710)
Q Consensus 189 ----~p~~~~~l~~L~~L~L--~~N~l~~~~----p~~l~~l~~L~~L~l~~n~~ 233 (710)
+...+...++|++|+| ++|.+...- ...+...++|++|++++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3456677788999999 778876432 22223334455555554443
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.19 E-value=9e-05 Score=78.87 Aligned_cols=264 Identities=10% Similarity=0.021 Sum_probs=161.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEE
Q 005177 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (710)
Q Consensus 100 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 179 (710)
..+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.+ .+|+.+++..+- +..-...|.+. +|+.+.
T Consensus 68 C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~ 141 (379)
T 4h09_A 68 CYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS-SVKRIV 141 (379)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-CCCEEE
T ss_pred CCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-ccccccccccc-eeeeee
Confidence 678999999755 553444566666 6888877644 44333445554 489999987653 32223344444 566666
Q ss_pred ccCCCCCCCCCcccCCCCCCCeEEecCCcCCCC------------CcccccccccccccccccccccccCCccccCCCcc
Q 005177 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ------------IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV 247 (710)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~p~~l~~l~~L~~L~l~~n~~~g~~p~~l~~l~~L 247 (710)
+-.+ ++..-...|.++.+++...+..+..... ....+.....+..+.+..+ ........+....+|
T Consensus 142 ~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l 219 (379)
T 4h09_A 142 IPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPST-VKTVTAYGFSYGKNL 219 (379)
T ss_dssp ECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTT-CCEECTTTTTTCSSC
T ss_pred ccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccc-eeEEeeccccccccc
Confidence 5543 4434455677888888887765543211 1111222222222222111 111112234455566
Q ss_pred chhccccccCCccCchhccCCCCCcEEEccccccCCCCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCCEEEcccc
Q 005177 248 QYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327 (710)
Q Consensus 248 ~~L~ls~n~l~g~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 327 (710)
+.+.+..+ +.......+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.++
T Consensus 220 ~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~ 296 (379)
T 4h09_A 220 KKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNS 296 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCT
T ss_pred ceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccccc
Confidence 66665443 33333455777888888888665 44444566778888999888654 44344567888899999999888
Q ss_pred cCcccCCcccCCCCCCcEEeccCCCCCCCCCcccCCCCCCcEEECCCC
Q 005177 328 EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTN 375 (710)
Q Consensus 328 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~~~~L~~L~ls~N 375 (710)
.++..-...|.++.+|+.+.|..+ ++..-...+.+|++|+.+.+..+
T Consensus 297 ~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 297 AIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 887655678888899999998754 54333457788888888877544
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.18 E-value=6e-06 Score=84.46 Aligned_cols=134 Identities=16% Similarity=0.175 Sum_probs=91.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccc-hhHHHHHHHHHHHhccCCC---CceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.++.|.++.||++...+|..++||+..... .....+..|++.|+.++|. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 456788899999999998899999999975432 2246789999999999875 577788764 46899999999
Q ss_pred CChhh-----------hhhcC-----------------------CCHHHHH---HH-----------------HHHHHHH
Q 005177 526 GNLSE-----------KIRTK-----------------------RDWAAKY---KI-----------------VLGVARG 551 (710)
Q Consensus 526 gsL~~-----------~l~~~-----------------------~~~~~~~---~i-----------------~~~ia~g 551 (710)
+++.. .||.. .+|..-. ++ ...+.+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87532 12210 1354211 11 1111122
Q ss_pred HHHHh----cCCCCCceecCCCCCCeEecCCCceEEcccCcc
Q 005177 552 LCFLH----HDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 589 (710)
Q Consensus 552 L~yLH----~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla 589 (710)
++.+. ....|.++|+|+.+.||+++. +.+.|.|| .+
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~ 214 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AA 214 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CC
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-Cc
Confidence 23332 233578999999999999998 45889999 54
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.11 E-value=1.5e-05 Score=80.51 Aligned_cols=133 Identities=19% Similarity=0.116 Sum_probs=90.4
Q ss_pred hcCCCCC-ccEEEEcC-CCcEEEEEEeeccchhHHHHHHHHHHHhccC-CCCceeEEEEEEcCCceeEEEeecCCCChhh
Q 005177 454 AARPQSA-AGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 454 ig~g~~g-~vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~ 530 (710)
+..|..+ .||+.... ++..+.||+-..+ ....+.+|.+.|+.+. +--+-++++++.+.+..++||||+++.++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 4446555 58988764 5667889987643 3456778888887664 2235578899988899999999999877765
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------------
Q 005177 531 KIRTKRDWAAKYKIVLGVARGLCFLHHDC--------------------------------------------------- 559 (710)
Q Consensus 531 ~l~~~~~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------------- 559 (710)
..... ...+..++.++++.|+-||...
T Consensus 110 ~~~~~--~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 187 (272)
T 4gkh_A 110 VLEEY--PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLL 187 (272)
T ss_dssp HHHHC--GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTC
T ss_pred cccCC--HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcc
Confidence 44321 1122334444555555555321
Q ss_pred ----CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 560 ----YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 560 ----~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+.++|+|+.+.||+++.++.+-|.||+.+.
T Consensus 188 ~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 188 PFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1247899999999999987777799998764
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.89 E-value=2.7e-05 Score=82.48 Aligned_cols=136 Identities=7% Similarity=0.043 Sum_probs=86.1
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCC--ceeEEEEEEcC-CceeEEEeecCCCC
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGFCYNR-HQAYLLYDYLPNGN 527 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~Ey~~~gs 527 (710)
...++.|....+|+... +|..+++|.-... ..+..|...+..+.... +.++++++... +..++||||+++..
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 45567788889998875 5788999987543 24777888887776433 45677777764 56899999999765
Q ss_pred hhhh------------------hhcC-------------------CCHHHHH---------------------HHHHHHH
Q 005177 528 LSEK------------------IRTK-------------------RDWAAKY---------------------KIVLGVA 549 (710)
Q Consensus 528 L~~~------------------l~~~-------------------~~~~~~~---------------------~i~~~ia 549 (710)
+.+. ||.. ..|...+ .....+.
T Consensus 121 l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 200 (362)
T 3ovc_A 121 LQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALD 200 (362)
T ss_dssp TTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHH
Confidence 5321 1110 0121110 1111111
Q ss_pred HHHHHHhcC-CCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 550 RGLCFLHHD-CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 550 ~gL~yLH~~-~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+-.+++... ..|.++|+|+++.||+++++..+.|.||+.+..
T Consensus 201 ~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 201 ELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 122223211 125789999999999998777788999998754
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.86 E-value=1.8e-05 Score=83.57 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=53.6
Q ss_pred hhh-cCCCCCccEEEEcC-------CCcEEEEEEeeccc---h-hHHHHHHHHHHHhccCC---CCceeEEEEEEcC---
Q 005177 452 EEA-ARPQSAAGCKAVLP-------TGITVSVKKIEWGA---T-RIKIVSEFITRIGTVRH---KNLIRLLGFCYNR--- 513 (710)
Q Consensus 452 ~~i-g~g~~g~vy~~~~~-------~g~~vAvK~l~~~~---~-~~~~~~~e~~~l~~l~H---~niv~l~g~~~~~--- 513 (710)
+.+ +.|....+|+.... +|..+++|.-.... . ....+.+|.+.++.++. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 445 67778889988754 26778888865432 1 12456778888777653 2466788887665
Q ss_pred CceeEEEeecCCCChhh
Q 005177 514 HQAYLLYDYLPNGNLSE 530 (710)
Q Consensus 514 ~~~~lv~Ey~~~gsL~~ 530 (710)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876653
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.63 E-value=0.00017 Score=75.27 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=77.7
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhcc-----CCCCceeEE-E--EEEcCCceeEEEeec
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-----RHKNLIRLL-G--FCYNRHQAYLLYDYL 523 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~Ey~ 523 (710)
..++.|....+|+....+|. +++|+..... .....|.+++..+ ..|.++... | +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 34555668899998876554 8899987532 2223344444333 234444311 1 122356789999999
Q ss_pred CCCChh--------------hhhhc-------C---------CCHHHHH-------------------------------
Q 005177 524 PNGNLS--------------EKIRT-------K---------RDWAAKY------------------------------- 542 (710)
Q Consensus 524 ~~gsL~--------------~~l~~-------~---------~~~~~~~------------------------------- 542 (710)
+|..+. ..+|. . ..|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11221 0 1343211
Q ss_pred HHHHHHHHHHHHHhc----------CCCCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 543 KIVLGVARGLCFLHH----------DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 543 ~i~~~ia~gL~yLH~----------~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+...+.+++++|+. ...+.++|+|+++.||+++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123446667763 123589999999999999878889999999653
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.54 E-value=0.00034 Score=72.07 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=90.9
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccC---CCCceeEEEEEEcCCceeEEEeecCCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPNG 526 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~Ey~~~g 526 (710)
..+.++.|....+|+... ++..++||.-... ....+..|.+.|+.+. ...+.+.++++...+..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 456678888999999886 4667888887643 3556788888877764 356778889888888899999999987
Q ss_pred Chhh-----------hhhc--C----------------------CCHHHHH---HHHH--H--------------HHHH-
Q 005177 527 NLSE-----------KIRT--K----------------------RDWAAKY---KIVL--G--------------VARG- 551 (710)
Q Consensus 527 sL~~-----------~l~~--~----------------------~~~~~~~---~i~~--~--------------ia~g- 551 (710)
.+.. .||. . .+|..-. ++.. + +.+.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1221 0 1464321 1111 1 1111
Q ss_pred HHHHh-cCCCCCceecCCCCCCeEecCCCceEEcccC
Q 005177 552 LCFLH-HDCYPAIPHGDLKASNIVFDENMEPHLAEFG 587 (710)
Q Consensus 552 L~yLH-~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG 587 (710)
...|. ....|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23343 22357899999999999999887 8899974
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.50 E-value=0.00016 Score=77.53 Aligned_cols=74 Identities=12% Similarity=0.003 Sum_probs=48.2
Q ss_pred hhhhcCCCCCccEEEEcC-CCcEEEEEEeeccc--------hhHHHHHHHHHHHhccCC--CCce-eEEEEEEcCCceeE
Q 005177 451 CEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--------TRIKIVSEFITRIGTVRH--KNLI-RLLGFCYNRHQAYL 518 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 518 (710)
.+.+|.|..+.||++... ++..++||...... .....+..|.+.+..+.. |..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999764 56789999764321 123445677887776642 4444 45543 3456789
Q ss_pred EEeecCCC
Q 005177 519 LYDYLPNG 526 (710)
Q Consensus 519 v~Ey~~~g 526 (710)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999863
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.44 E-value=3e-05 Score=72.27 Aligned_cols=34 Identities=3% Similarity=0.023 Sum_probs=16.6
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCcEEECcCC
Q 005177 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRN 135 (710)
Q Consensus 102 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 135 (710)
.|+.|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3555555555554332223444555555555554
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.41 E-value=5.4e-05 Score=70.52 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=66.0
Q ss_pred CccccCCCCCcEEECcCCCCCCCCChhhcCCCCCCEEECCCCC-CCcCCchhccCC----CCCCEEEccCCC-CCCCCCc
Q 005177 118 PVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQL----EHLKVLNLAGSY-FSGPIPS 191 (710)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~L----~~L~~L~L~~n~-l~~~~p~ 191 (710)
|.....-.+|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ++..-=.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433334579999999999876655667889999999999985 664333445554 379999999974 6643223
Q ss_pred ccCCCCCCCeEEecCCc
Q 005177 192 QFGSFKSLEFLHLAGNL 208 (710)
Q Consensus 192 ~~~~l~~L~~L~L~~N~ 208 (710)
.+..+++|+.|+++++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 46778999999999875
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.15 E-value=0.00096 Score=72.00 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=44.4
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEee-------cc-ch--hHHHHHHHHHHH-hccCCCCceeEEEEEEcCCceeE
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIE-------WG-AT--RIKIVSEFITRI-GTVRHKNLIRLLGFCYNRHQAYL 518 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~-------~~-~~--~~~~~~~e~~~l-~~l~H~niv~l~g~~~~~~~~~l 518 (710)
..+.+|.|....||++.. ++..++||... .. .. ....+..|+..+ ....+..+.+++++. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 355678898999999975 56789999321 11 10 222333343322 222334566676665 567799
Q ss_pred EEeec-CC
Q 005177 519 LYDYL-PN 525 (710)
Q Consensus 519 v~Ey~-~~ 525 (710)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.13 E-value=0.00077 Score=68.65 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=53.3
Q ss_pred hhhhhcCCCCCccEEEEcCCCcEEEEEEeeccch-hHHHHHHHHHHHhccCCC---CceeEEEEEEcCCceeEEEeecCC
Q 005177 450 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 525 (710)
Q Consensus 450 ~~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~Ey~~~ 525 (710)
..+.+|.|..+.||+..+.+|+.|.||+-..... ....|..|.+.|+.+.-- -+.+.+++ +.-++||||++.
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecc
Confidence 4566788999999999999999999998764322 234678888887766421 23444443 234799999987
Q ss_pred CCh
Q 005177 526 GNL 528 (710)
Q Consensus 526 gsL 528 (710)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.54 E-value=0.011 Score=61.22 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=27.0
Q ss_pred CCCceecCCCCCCeEecCC----CceEEcccCcccc
Q 005177 560 YPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYL 591 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~~ 591 (710)
.+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999874 6789999997654
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.48 E-value=0.0082 Score=62.05 Aligned_cols=136 Identities=10% Similarity=0.010 Sum_probs=77.4
Q ss_pred hhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCC--ceeEEEE-----EEcCCceeEEEeecCC
Q 005177 453 EAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGF-----CYNRHQAYLLYDYLPN 525 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lv~Ey~~~ 525 (710)
.++ |....||+....+|+.+++|....+......+..|.+.+..++... +.+.+.. ....+..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 344 6777899988778888999998743223445666777666554222 3334332 1224556889999987
Q ss_pred CChhh-----------h---hhc-----------CCCHHHH----HHHH---------------HHHHHHHHHHhc----
Q 005177 526 GNLSE-----------K---IRT-----------KRDWAAK----YKIV---------------LGVARGLCFLHH---- 557 (710)
Q Consensus 526 gsL~~-----------~---l~~-----------~~~~~~~----~~i~---------------~~ia~gL~yLH~---- 557 (710)
..+.. . +|. ..++..- ..+. ..+.+.++.+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 0 111 0122110 0010 011112222221
Q ss_pred CCCCCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 558 DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 558 ~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
...+.++|+|+++.||+++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234689999999999999 4 899999986543
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.47 E-value=0.0051 Score=54.31 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=15.8
Q ss_pred CcEEECcCCCCCCCCChhhcCCCCCCEEECCCCCC
Q 005177 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF 161 (710)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L~~N~l 161 (710)
|++|+|++|+|+...++.|..+++|++|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333344444444444444443
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.40 E-value=0.0032 Score=64.97 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=75.8
Q ss_pred hhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc--eeEEEE------EEcCCceeEEEeec
Q 005177 452 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGF------CYNRHQAYLLYDYL 523 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~------~~~~~~~~lv~Ey~ 523 (710)
+.++.|....+|+....+| .+++|..... .....+..|++.+..++...+ .+++.. ....+..+++|||+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3455677778899887666 5778988752 123345556666655432222 222211 12235678999999
Q ss_pred CCCChhh--------------hhhc-------C----C---CHHHHHH------------HHHHHHHHHHHHhcC----C
Q 005177 524 PNGNLSE--------------KIRT-------K----R---DWAAKYK------------IVLGVARGLCFLHHD----C 559 (710)
Q Consensus 524 ~~gsL~~--------------~l~~-------~----~---~~~~~~~------------i~~~ia~gL~yLH~~----~ 559 (710)
+|..+.. .+|. . . .|..... +...+.+.++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865421 1121 0 0 1433111 011234445555421 2
Q ss_pred CCCceecCCCCCCeEecCCCceEEcccCccc
Q 005177 560 YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 560 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~ 590 (710)
.+.++|+|+.+.||+++++..+.|.||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3478999999999999987666899998653
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.35 E-value=0.0013 Score=62.37 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=48.8
Q ss_pred CCCcEEECCCC-cCcc----cCCccccCCCCCcEEECcCCCCCCC----CChhhcCCCCCCEEECCCCCCCcC----Cch
Q 005177 101 NELVDLNLSHN-SFSG----QFPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPA 167 (710)
Q Consensus 101 ~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~L~~N~l~~~----~p~ 167 (710)
+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|++... +-..+..-+.|+.|+|++|.|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46788888875 6642 1233445566788888888877532 222333446677777777777632 223
Q ss_pred hccCCCCCCEEEccCC
Q 005177 168 EISQLEHLKVLNLAGS 183 (710)
Q Consensus 168 ~~~~L~~L~~L~L~~n 183 (710)
.+..-+.|++|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3344455777777654
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.24 E-value=0.003 Score=64.58 Aligned_cols=71 Identities=7% Similarity=-0.004 Sum_probs=40.9
Q ss_pred hhhhcCCCCCccEEEEcCCCcEEEEEEeeccchhHHHHHHHHHHHhccCCCCce-eEEEEEEcCCceeEEEeec-CCCCh
Q 005177 451 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYL-PNGNL 528 (710)
Q Consensus 451 ~~~ig~g~~g~vy~~~~~~g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~Ey~-~~gsL 528 (710)
.+.++.|....+|+. ..+++|.-..+.........|.+.+..+....+. +++++ +.+.-++|+||+ ++.++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 456777888889988 4578887764322211234566666555432333 45544 344457999999 55444
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.17 E-value=0.0089 Score=52.72 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=26.1
Q ss_pred EEECcCCCCC-CCCChhhcCCCCCCEEECCCCCCCcCCchhccCCCCCCEEEccCCCC
Q 005177 129 SLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (710)
Q Consensus 129 ~L~Ls~N~l~-~~~p~~l~~L~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~n~l 185 (710)
.++.++++++ ..+|..+. ++|++|+|++|+|+..-+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4455555543 23332211 2455555555555544444445555555555555544
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.11 E-value=0.015 Score=61.33 Aligned_cols=134 Identities=13% Similarity=0.139 Sum_probs=75.9
Q ss_pred hhcCCCCCccEEEEcCC--------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+..|....+|+...++ +..+.+|+-...........+|.++++.+.-..+ .++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 34456677889988653 4688888863322234455678887776643233 456666543 2999999
Q ss_pred CCCChhhh-----------------hhc-------CCC--HHHHHHHHHHHH-------------------HHHHH----
Q 005177 524 PNGNLSEK-----------------IRT-------KRD--WAAKYKIVLGVA-------------------RGLCF---- 554 (710)
Q Consensus 524 ~~gsL~~~-----------------l~~-------~~~--~~~~~~i~~~ia-------------------~gL~y---- 554 (710)
+|..+..- ||. ... |.+..++..++. +.++.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 97554310 111 112 333333333221 12222
Q ss_pred HhcC-CCCCceecCCCCCCeEecCC----CceEEcccCccc
Q 005177 555 LHHD-CYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKY 590 (710)
Q Consensus 555 LH~~-~~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~ 590 (710)
|... ....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2221 22368999999999999876 689999998764
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.03 E-value=0.012 Score=63.57 Aligned_cols=72 Identities=14% Similarity=0.035 Sum_probs=45.9
Q ss_pred hhhcCCCCCccEEEEcCC--------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEee
Q 005177 452 EEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDY 522 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey 522 (710)
+.++.|....+|+...++ +..+.+|+-.... ....+..|.+++..+...++ .++++.+.+ .+||||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 345667778899998653 5688888874311 11344468887777654444 466766532 389999
Q ss_pred cCCCCh
Q 005177 523 LPNGNL 528 (710)
Q Consensus 523 ~~~gsL 528 (710)
+++..+
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.92 E-value=0.012 Score=63.97 Aligned_cols=73 Identities=8% Similarity=-0.076 Sum_probs=44.7
Q ss_pred hhhcCCCCCccEEEEcCC-CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEeecCCCCh
Q 005177 452 EEAARPQSAAGCKAVLPT-GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYLPNGNL 528 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey~~~gsL 528 (710)
+.++.|....+|+...++ +..+++|+...+....-....|.+++..+...++ .++++++. + .+||||+++..+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 456667778899998765 5778888764322111112467777777765555 46777662 2 359999997444
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.92 E-value=0.011 Score=62.25 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=41.7
Q ss_pred hhhcCCCCCccEEEEcCC---------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCce-eEEEEEEcCCceeEEEe
Q 005177 452 EEAARPQSAAGCKAVLPT---------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 521 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E 521 (710)
..++.|..-.+|+....+ +..+++|.-..+.........|.+.+..+...+++ ++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 345567777889887654 26788887654322221235677777666533433 566544 2 368999
Q ss_pred ecCCCCh
Q 005177 522 YLPNGNL 528 (710)
Q Consensus 522 y~~~gsL 528 (710)
|+++..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9997543
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.88 E-value=0.0023 Score=60.60 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=62.2
Q ss_pred ccCCCCCcEEECcCC-CCCCC----CChhhcCCCCCCEEECCCCCCCc----CCchhccCCCCCCEEEccCCCCCCC---
Q 005177 121 IFNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP--- 188 (710)
Q Consensus 121 ~~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~L~~n~l~~~--- 188 (710)
+.+-+.|+.|+|++| ++... +-..+..-+.|+.|+|++|.+.. .+...+..-+.|++|+|+.|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445678999999986 66531 23445667889999999999873 3344455668899999999998632
Q ss_pred -CCcccCCCCCCCeEEecCC
Q 005177 189 -IPSQFGSFKSLEFLHLAGN 207 (710)
Q Consensus 189 -~p~~~~~l~~L~~L~L~~N 207 (710)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2234555567999999865
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.06 E-value=0.093 Score=54.45 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=27.1
Q ss_pred CCceecCCCCCCeEecCCCceEEcccCcccc
Q 005177 561 PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 591 (710)
Q Consensus 561 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~ 591 (710)
+.++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999986543
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=91.22 E-value=0.28 Score=52.33 Aligned_cols=72 Identities=3% Similarity=-0.083 Sum_probs=42.6
Q ss_pred hhcCCCCCccEEEEcCC--------CcEEEEEEeeccchhHHHHHHHHHHHhccCCCCc-eeEEEEEEcCCceeEEEeec
Q 005177 453 EAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDYL 523 (710)
Q Consensus 453 ~ig~g~~g~vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~Ey~ 523 (710)
.+..|....+|+...++ +..+++|+-..+....-...+|.++++.+.-.++ .++++.+ . -++||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEEe
Confidence 34456677788887653 5778888865432222223456666666543233 3455533 2 37899999
Q ss_pred CCCCh
Q 005177 524 PNGNL 528 (710)
Q Consensus 524 ~~gsL 528 (710)
+|..+
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.45 E-value=0.36 Score=51.09 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=25.9
Q ss_pred CCceecCCCCCCeEecCC------CceEEcccCccc
Q 005177 561 PAIPHGDLKASNIVFDEN------MEPHLAEFGFKY 590 (710)
Q Consensus 561 ~~iiHrDlk~~NiLl~~~------~~~kl~DfGla~ 590 (710)
..++|+|+.+.||+++.+ +.+.++||-.+.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 368899999999999876 789999998654
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=86.08 E-value=4.4 Score=38.54 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=59.1
Q ss_pred Chhhhhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCceEEcccCccccccccCCCCcccc
Q 005177 527 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKI 603 (710)
Q Consensus 527 sL~~~l~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 603 (710)
||.++|.. +++..+.+.++.|.+++|.-+-.+..+ ..+=+-|..|++..+|.+...+ +.+. .. ..
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~------~~ 101 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AG------EP 101 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---cc------cc
Confidence 67888754 788999999999999998665211011 1222335889999999988764 2110 00 01
Q ss_pred cccCchhhhhccCCccccceeeHHHHHHHHHhCCCC
Q 005177 604 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 639 (710)
Q Consensus 604 ~~~~~~e~~~~~~~~~~~DVySfGvvl~Elltg~~p 639 (710)
. ..+|+... ...+.+.=|||+|+++|.-+-=+.|
T Consensus 102 ~-~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 102 P-PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred C-CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1 12333321 2345667899999999988764433
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.48 E-value=2.4 Score=40.23 Aligned_cols=91 Identities=13% Similarity=0.071 Sum_probs=67.6
Q ss_pred HHHHhccCCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCC
Q 005177 492 ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKAS 571 (710)
Q Consensus 492 ~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~ 571 (710)
+.+|. ..||+.++. .+-.+++.+.+.|+.-+.+-=+..++ ..+...|++++..++..-++++.+ +|-=+.|+
T Consensus 37 l~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 37 MYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp GGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred HHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 44443 358998876 56666777777666544332222233 578899999999999998888766 88889999
Q ss_pred CeEecCCCceEEcccCccc
Q 005177 572 NIVFDENMEPHLAEFGFKY 590 (710)
Q Consensus 572 NiLl~~~~~~kl~DfGla~ 590 (710)
|+++|.++.|++.=.|+..
T Consensus 109 NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp GEEECTTSCEEESCCEETT
T ss_pred eEEEcCCCCEEEEEccCcc
Confidence 9999999999999888743
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.68 E-value=4.6 Score=38.40 Aligned_cols=85 Identities=11% Similarity=0.081 Sum_probs=64.5
Q ss_pred CCCCceeEEEEEEcCCceeEEEeecCCCChhhhhhcCCCHHHHHHHHHHHHHHHH-HHhcCCCCCceecCCCCCCeEecC
Q 005177 499 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC-FLHHDCYPAIPHGDLKASNIVFDE 577 (710)
Q Consensus 499 ~H~niv~l~g~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gL~-yLH~~~~~~iiHrDlk~~NiLl~~ 577 (710)
.||.. -...-.+++.+.+.|+--+++-=+..++ ..+...|++++..++.-.. +++.+ +|-=+.|+||++|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~ 119 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNR 119 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECT
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeC
Confidence 58887 3344466778777777654543333443 5788899999999998887 77765 78889999999999
Q ss_pred CCceEEcccCcccc
Q 005177 578 NMEPHLAEFGFKYL 591 (710)
Q Consensus 578 ~~~~kl~DfGla~~ 591 (710)
++.|++.=.|+-..
T Consensus 120 ~~~p~i~hRGi~~~ 133 (219)
T 4ano_A 120 ALEPFFLHVGVKES 133 (219)
T ss_dssp TCCEEESCCEETTT
T ss_pred CCcEEEEEcCCccc
Confidence 99999999997443
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.56 E-value=0.61 Score=50.44 Aligned_cols=58 Identities=9% Similarity=-0.018 Sum_probs=17.3
Q ss_pred hhhcCCCCCccEEEEcCC-CcEEEE------EEeeccch---hHHHHHHHHHHHhccCCCCceeEEEEEEc
Q 005177 452 EEAARPQSAAGCKAVLPT-GITVSV------KKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN 512 (710)
Q Consensus 452 ~~ig~g~~g~vy~~~~~~-g~~vAv------K~l~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 512 (710)
+.+| ||.||+|.+.. ..+||| |..+.+.. ....+.+|..++.+.+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4455 99999998743 468999 77765332 23457777888888899999999988754
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=66.13 E-value=3.2 Score=43.80 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=23.9
Q ss_pred ceecCCCCCCeEe------cCCCceEEcccCcccc
Q 005177 563 IPHGDLKASNIVF------DENMEPHLAEFGFKYL 591 (710)
Q Consensus 563 iiHrDlk~~NiLl------~~~~~~kl~DfGla~~ 591 (710)
++|.|+.+.||++ +++..+.+.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4456799999987643
No 451
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=39.47 E-value=1.8e+02 Score=29.40 Aligned_cols=76 Identities=13% Similarity=0.036 Sum_probs=43.1
Q ss_pred ceeEEEeecCCCChhhhhhcCCCHHHHH--HHHH--HHHHHHHHHhcCCC-CC-ceecCCCCCCeEecCCCc-eEEcccC
Q 005177 515 QAYLLYDYLPNGNLSEKIRTKRDWAAKY--KIVL--GVARGLCFLHHDCY-PA-IPHGDLKASNIVFDENME-PHLAEFG 587 (710)
Q Consensus 515 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~~--~i~~--~ia~gL~yLH~~~~-~~-iiHrDlk~~NiLl~~~~~-~kl~DfG 587 (710)
..+++|||.+|..|.+.-+. .|.... +... +-.-++++...... -+ +-+.--.++|||++++.. +.++|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~--~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTT--SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSS--SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhh--hhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 45699999996555443221 132221 2222 22345555554432 22 222336789999987655 8899999
Q ss_pred ccccc
Q 005177 588 FKYLT 592 (710)
Q Consensus 588 la~~~ 592 (710)
++...
T Consensus 234 ~af~~ 238 (342)
T 1cja_A 234 IIPLD 238 (342)
T ss_dssp CCCCC
T ss_pred ccccC
Confidence 87553
Done!