Your job contains 1 sequence.
>005180
MGDLRDWSPEPNGAVFGERPSSSSSSVPSNQTAIGAEYWQRAEEATQGIIAQVQPTVVSE
ERRKAVIDYVQRLIRNYLGCEVFPFGSVPLKTYLPDGDIDLTAFGGLNVEEALANDVCSV
LEREDQNKAAEFVVKDAQLIRAEVKLVKCLVQNIVVDISFNQLGGLSTLCFLEQVDRLIG
KDHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHLFHSSLNGPLAVLYKF
LDYFSKFDWDSYCISLNGPVRISSLPEVVVETPENSGGDLLLSSEFLKECVEQFSVPSRG
FDTNSRSFPPKHLNIVDPLKENNNLGRSVSKGNFYRIRSAFTYGARKLGHILSQPEESLT
DELRKFFSNTLDRHGSGQRPDVQDPVPLSRYNGFGVSSTFSGTELCREDQTIYESEPNSS
GITENCRIDDEAETINEPHNSGNGTAVSETRLSGDAKDLATSKNLNLVISNETSKCSSLS
GEESKARHAPHLYFSSSTMGNGEIRNGNSEWKQQLNSGSAEKNVTSGILPTHYKETGLIL
LNGQDENQLDVNHGASSPVESNHHPSLMSTIPWSTEEFNFSYSGYHASPRTVGSPRAANS
LSDLSGDYESHQISLNHVWWWYEHALNSSYSPMSPQLLSQFQSKNSWDLMQRSLPFRRNI
IPQMSANGAVPRPLFYPMTPPMLPGASFGMEEMPKHRGTGTYFPNTVYLF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005180
(710 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081885 - symbol:AT3G51620 "AT3G51620" species... 1632 1.9e-203 2
TAIR|locus:2078426 - symbol:AT3G56320 species:3702 "Arabi... 1108 6.6e-121 2
TAIR|locus:2076795 - symbol:AT3G61690 species:3702 "Arabi... 1118 2.5e-113 1
TAIR|locus:2061868 - symbol:AT2G40520 "AT2G40520" species... 922 6.2e-98 3
TAIR|locus:2164047 - symbol:AT5G53770 "AT5G53770" species... 117 2.2e-07 2
POMBASE|SPCC663.12 - symbol:cid12 "poly(A) polymerase Cid... 130 1.7e-06 2
TAIR|locus:2063937 - symbol:HESO1 "HEN1 suppressor 1" spe... 143 2.5e-06 1
POMBASE|SPAC12G12.13c - symbol:cid14 "poly(A) polymerase ... 141 6.3e-06 1
UNIPROTKB|F1NCH7 - symbol:PAPD5 "Uncharacterized protein"... 90 0.00048 2
>TAIR|locus:2081885 [details] [associations]
symbol:AT3G51620 "AT3G51620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0016740 IPI:IPI00542850
RefSeq:NP_850678.2 UniGene:At.660 ProteinModelPortal:F4J4G2
PRIDE:F4J4G2 EnsemblPlants:AT3G51620.2 GeneID:824325
KEGG:ath:AT3G51620 OMA:VETPENG PhylomeDB:F4J4G2 Uniprot:F4J4G2
Length = 829
Score = 1632 (579.6 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 356/580 (61%), Positives = 412/580 (71%)
Query: 37 EYWQRAEEATQGIIAQVQPTVVSEERRKAVIDYVQRLIRNYLGCEVFPFGSVPLKTYLPD 96
E W R EEAT+ II QV PT+VSE+RR+ VI YVQ+LIR LGCEV FGSVPLKTYLPD
Sbjct: 32 ELWMRVEEATREIIEQVHPTLVSEDRRRDVILYVQKLIRMTLGCEVHSFGSVPLKTYLPD 91
Query: 97 GDIDLTAFGGLNVEEALANDVCSVLEREDQNKAAEFVVKDAQLIRAEVKLVKCLVQNIVV 156
GDIDLTAFGGL EE LA V +VLERE+ N +++FVVKD QLIRAEVKLVKCLVQNIVV
Sbjct: 92 GDIDLTAFGGLYHEEELAAKVFAVLEREEHNLSSQFVVKDVQLIRAEVKLVKCLVQNIVV 151
Query: 157 DISFNQLGGLSTLCFLEQVDRLIGKDHLFKRSIILIKAWCYYESRILGAHHGLISTYALE 216
DISFNQ+GG+ TLCFLE++D LIGKDHLFKRSIILIKAWCYYESRILGA HGLISTYALE
Sbjct: 152 DISFNQIGGICTLCFLEKIDHLIGKDHLFKRSIILIKAWCYYESRILGAFHGLISTYALE 211
Query: 217 TLVLYIFHLFHSSLNGPLAVLYKFLDYFSKFDWDSYCISLNGPVRISSLPEVVVETPENS 276
TLVLYIFHLFHSSLNGPLAVLYKFLDYFSKFDWDSYCISLNGPV +SSLP++VVETPEN
Sbjct: 212 TLVLYIFHLFHSSLNGPLAVLYKFLDYFSKFDWDSYCISLNGPVCLSSLPDIVVETPENG 271
Query: 277 GGDLLLSSEFLKECVEQFSVPSRGFDTNSRSFPPKHLNIVDPLKENNNLGRSVSKGNFYR 336
G DLLL+SEFLKEC+E +SVPSRGF+TN R F KHLNIVDPLKE NNLGRSVSKGNFYR
Sbjct: 272 GEDLLLTSEFLKECLEMYSVPSRGFETNPRGFQSKHLNIVDPLKETNNLGRSVSKGNFYR 331
Query: 337 IRSAFTYGARKLGHILSQPEESLTDELRKFFSNTLDRHGSGQRPDVQDPVPLSRYNGFGV 396
IRSAFTYGARKLG + Q +E+++ ELRKFFSN L RHGSGQRPDV D +P RYN +
Sbjct: 332 IRSAFTYGARKLGQLFLQSDEAISSELRKFFSNMLLRHGSGQRPDVHDAIPFLRYNRY-- 389
Query: 397 SSTFSGTELCREDQTIYESEPNSS-GITENCRIDDEAET---INEPHNSG---NGT---- 445
++ + +E Q + ESE +SS G T N R D E ++ P +G +G+
Sbjct: 390 NAILPASNHFQEGQVVNESESSSSSGATGNGRHDQEDSLDAGVSIPSTTGPDLSGSPGET 449
Query: 446 --AVSETRLSGDAKDLATSKNLNLVISNETSKCSSLSGEESKAR-HAPHLYFSSSTMGNG 502
+VSE R SGDAKDLAT + L IS++ K LS +ES + + H F+ M NG
Sbjct: 450 VPSVSEERFSGDAKDLATLRIQKLEISDDAMKSPCLSDKESDSPLNGKHHSFNQ--MRNG 507
Query: 503 EIRNGNSEWKQQLNSGSAEKNVTSGILPTHYKETGLILLNGQDENQLDVNHGASSPVESN 562
E+ NGN KQQ NS I H E +EN+ H V
Sbjct: 508 EVLNGNGVGKQQENSWHTGSRRVKDI---HINE---------NENE----H-----VGYE 546
Query: 563 HHPSLMSTIPWSTEEFNFSYSGYHASPRTVGSPRAANSLS 602
P S +PW E+ + YSG+ S G+P + LS
Sbjct: 547 DLP-FASAVPWPQEDMHLHYSGHCVS----GTPNMLSDLS 581
Score = 359 (131.4 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 71/157 (45%), Positives = 96/157 (61%)
Query: 549 LDVNHGASSPVESNHHPSLMSTIPWSTEEFNFSYSGYHASPRTVGSPRAANSLSDLSGDY 608
+ +N + V P S +PW E+ + YSG+ S G+P N LSDLSGDY
Sbjct: 533 IHINENENEHVGYEDLP-FASAVPWPQEDMHLHYSGHCVS----GTP---NMLSDLSGDY 584
Query: 609 ESHQISLNHVWWWYEHALNSSYSPMSPQLLSQFQSKNSWDLMQRSLPFRRNIIPQMSANG 668
ES SL WW+++ N SP+SP L Q + NSW++M+ +LPFRRN ++ANG
Sbjct: 585 ESQLNSLRFGRWWFDYVQNGPMSPLSPPGLPQLPNNNSWEVMRHALPFRRNAPTPVNANG 644
Query: 669 AVPRPLFYPMTPPMLPGASFGMEEMPKHRGTGTYFPN 705
VPR +F+ + P M+PG FG+EE+PK RGTGTYFPN
Sbjct: 645 VVPRQVFFHVNPQMIPGPGFGIEELPKPRGTGTYFPN 681
>TAIR|locus:2078426 [details] [associations]
symbol:AT3G56320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
HOGENOM:HOG000084944 ProtClustDB:CLSN2680151 EMBL:BT008327
EMBL:AK228086 IPI:IPI00522650 RefSeq:NP_191191.2 UniGene:At.23883
UniGene:At.71191 ProteinModelPortal:Q7Y227 IntAct:Q7Y227
PaxDb:Q7Y227 PRIDE:Q7Y227 EnsemblPlants:AT3G56320.1 GeneID:824799
KEGG:ath:AT3G56320 TAIR:At3g56320 eggNOG:NOG311156
InParanoid:Q7Y227 OMA:ERESEFH PhylomeDB:Q7Y227
Genevestigator:Q7Y227 Uniprot:Q7Y227
Length = 603
Score = 1108 (395.1 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
Identities = 213/353 (60%), Positives = 265/353 (75%)
Query: 34 IGAEYWQRAEEATQGIIAQVQPTVVSEERRKAVIDYVQRLIRNYLGCEVFPFGSVPLKTY 93
I A+ W AEE I+ +QP +VS+ R +IDYV+ LI ++ G EVF FGSVPLKTY
Sbjct: 35 IDADSWMIAEERAHEILCTIQPALVSDRSRNEIIDYVRTLIMSHEGIEVFSFGSVPLKTY 94
Query: 94 LPDGDIDLTAFGGLNVEEALANDVCSVLEREDQNKAAEFVVKDAQLIRAEVKLVKCLVQN 153
LPDGDIDLT N+++ +CS L+ E++ +EF D Q I A+VK++KC ++N
Sbjct: 95 LPDGDIDLTVLTKQNMDDDFYGQLCSRLQNEERE--SEFHATDVQFIPAQVKVIKCNIRN 152
Query: 154 IVVDISFNQLGGLSTLCFLEQVDRLIGKDHLFKRSIILIKAWCYYESRILGAHHGLISTY 213
I VDISFNQ GL LCFLEQVD+L G+DHLFKRSIIL+KAWCYYESRILGA+ GLISTY
Sbjct: 153 IAVDISFNQTAGLCALCFLEQVDQLFGRDHLFKRSIILVKAWCYYESRILGANTGLISTY 212
Query: 214 ALETLVLYIFHLFHSSLNGPLAVLYKFLDYFSKFDWDSYCISLNGPVRISSLPEVVVETP 273
AL LVLYI +LFHSSL+GPLAVLYKFLDY+ FDW++YCIS+NGPV ISSLPE+ +P
Sbjct: 213 ALAVLVLYIINLFHSSLSGPLAVLYKFLDYYGSFDWNNYCISVNGPVPISSLPELTAASP 272
Query: 274 ENSGGDLLLSSEFLKECVEQFSVPSRGFDTNSRSFPPKHLNIVDPLKENNNLGRSVSKGN 333
EN G +LLL +FL+ CVE +S P++ D+N FP KHLNIVDPLK +NNLG+SV++GN
Sbjct: 273 EN-GHELLLDEKFLRNCVELYSAPTKAVDSNGLEFPIKHLNIVDPLKYSNNLGKSVTQGN 331
Query: 334 FYRIRSAFTYGARKLGHILSQPEESLTDELRKFFSNTLDRHGSGQRPDVQDPV 386
RIR AFT GARKL +LS P +++ L KFF N+L+R+G GQR DV DPV
Sbjct: 332 VQRIRHAFTLGARKLRDVLSLPGDTMGWRLEKFFRNSLERNGKGQRQDVNDPV 384
Score = 102 (41.0 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
Identities = 42/147 (28%), Positives = 66/147 (44%)
Query: 570 TIPWSTEEF--NFSYSGYHASPRTVGSPRAA-----NSLSDLSGDYESHQISLNHVWWWY 622
T+ W E+F N + V P A + LS+LSGD++S L + ++
Sbjct: 356 TMGWRLEKFFRNSLERNGKGQRQDVNDPVTAFGTGRSELSELSGDFDSSFGRLVYGQMYH 415
Query: 623 EHALNSS----YSPMSPQLLSQFQSKNSWDLMQRSLPFRRNIIPQMSANGAVPRPLFYPM 678
H+L + Y P+S L + WD+++ + +R+N S N + F P+
Sbjct: 416 GHSLPGTFQHGYIPVSSHL-------SGWDIVRHLVTYRKNEFHLRSLNVSTSMQPF-PL 467
Query: 679 TPPMLPGASFGMEEMPKHRGTGTYFPN 705
LP G + M K RGTGTY P+
Sbjct: 468 HS--LPN---GCQNMRKTRGTGTYIPD 489
Score = 37 (18.1 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 469 ISNE-TSKCSSLSGEES 484
I N+ S C +LSGE S
Sbjct: 519 IDNDGASSCCNLSGEVS 535
>TAIR|locus:2076795 [details] [associations]
symbol:AT3G61690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002686 GO:GO:0016779
IPI:IPI00523694 RefSeq:NP_191728.2 UniGene:At.21960
ProteinModelPortal:F4JFF2 PRIDE:F4JFF2 EnsemblPlants:AT3G61690.1
GeneID:825342 KEGG:ath:AT3G61690 OMA:ESSWDGS Uniprot:F4JFF2
Length = 1303
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 287/727 (39%), Positives = 400/727 (55%)
Query: 1 MGDLRDWSPEPNGAVFGERXXXXXXXXXXNQTA-IGAEYWQRAEEATQGIIAQVQPTVVS 59
MG+ W+ P G + T + AE W +AE+ T +IA +QP S
Sbjct: 1 MGEHESWAASPPSPS-GLHPNGLLPGKAASVTRPLDAERWAKAEDRTAKLIACIQPNPPS 59
Query: 60 EERRKAVIDYVQRLIRN-YLGCEVFPFGSVPLKTYLPDGDIDLTAFGG-LNVEEALANDV 117
E+RR AV YV+RLI + ++F FGSVPLKTYLPDGDIDLTAF N++++ AN V
Sbjct: 60 EDRRNAVASYVRRLIMECFPQVQIFMFGSVPLKTYLPDGDIDLTAFSANQNLKDSWANLV 119
Query: 118 CSVLEREDQNKAAEFVVKDAQLIRAEVKLVKCLVQNIVVDISFNQLGGLSTLCFLEQVDR 177
+LE+E++N+ AEF VK+ Q I+AEVK++KCLV+NIVVDISFNQ+GGL TLCFLE+VD
Sbjct: 120 RDMLEKEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQIGGLCTLCFLEEVDH 179
Query: 178 LIGKDHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHLFHSSLNGPLAVL 237
I ++HLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIF+LF++S +GPL VL
Sbjct: 180 YINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFYLFNNSFSGPLEVL 239
Query: 238 YKFLDYFSKFDWDSYCISLNGPVRISSLPEVVVETPENSGGDLLLSSEFLKECVEQFSVP 297
Y+FL++FSKFDW ++C+SL GPV +SSLP+V E P G+L +S F + C ++V
Sbjct: 240 YRFLEFFSKFDWQNFCLSLWGPVPVSSLPDVTAEPPRRDVGELRVSEAFYRACSRVYAVN 299
Query: 298 SRGFDTNSRSFPPKHLNIVDPLKENNNLGRSVSKGNFYRIRSAFTYGARKLGHILSQPEE 357
+ + F KH N++DPL+ENNNLGRSVSKGNF+RIRSAFT GA+KL +L P+E
Sbjct: 300 IAPQEIQGQPFVSKHFNVIDPLRENNNLGRSVSKGNFFRIRSAFTLGAKKLTRLLECPKE 359
Query: 358 SLTDELRKFFSNTLDRHGSGQRPDVQ-DPVPLSRYNGFGVSSTFSGTELCREDQTIYESE 416
+L E+ +FF NT +RHGSG+RPD + + LSR G + E ++
Sbjct: 360 NLIHEVNQFFMNTWERHGSGRRPDAPGNDLWLSR---LGDPEPYHQAENVSNS---LNNK 413
Query: 417 PNSSGITENCRIDDEAETINEPHNSGN-GTAVS-----ETRLS-GDAKDLATSKNLNLVI 469
N + I R+ + P N GT ++ +T+ S G++ A N N
Sbjct: 414 RNQNAI----RLGGVHGARSMPSQQNNCGTEITSRVTYQTQKSRGNSYQPAQEVNSNQSA 469
Query: 470 SNETSKCSSLSGEESKAR--HAPHLYFSSSTMGNGEIRNGNSEWKQQLNSGSAEKNVTSG 527
N+ K E+ H H++ + T + E+ + E Q A + +G
Sbjct: 470 LND--KLQQTVKPETLVNNFHGRHIF--ARTRSSPELTETHGEALLQSRRSRAAPD--AG 523
Query: 528 ILPTHYKETGLILLNGQDENQLD--VNHGASSPVESNHHPSLMSTIPWSTEEFNFSYSGY 585
T+ I + L V + A S H PS S P ST + + + + Y
Sbjct: 524 KRQTNSTRVDSIRKKSLESETLSSGVRYSADSS-SVRHTPSPQS--PDSTADMSSAVNSY 580
Query: 586 HASPRTVGSPRAANSLSDLSGDYESHQI--SLNHVWWW-----YEHALNSSYS----PMS 634
+ VGS S ++G+ E + S+ V + N S P++
Sbjct: 581 YDE---VGSVSVNEDFS-VAGEQEEQDLVNSMTSVTGQGFNGHFPFPFNFSTGHLPFPIT 636
Query: 635 PQLLSQ--FQSKNSWDLMQRSLPFRRNIIPQMSANGAVPRPLFYPMTPPMLPGASFGMEE 692
P +L+ + +N ++ +LPF I S N P+ P + + E
Sbjct: 637 PSILASMGYGQRNMPGIVPSNLPF---IEAPWSTNLQFPQNFVSSPFTHYFPSGAHPISE 693
Query: 693 MPKHRGT 699
P G+
Sbjct: 694 KPSKTGS 700
>TAIR|locus:2061868 [details] [associations]
symbol:AT2G40520 "AT2G40520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS]
InterPro:IPR002934 Pfam:PF01909 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016779 EMBL:AY924760
IPI:IPI00525074 RefSeq:NP_001078031.1 RefSeq:NP_001118485.1
RefSeq:NP_001118486.1 RefSeq:NP_850331.1 UniGene:At.37036
UniGene:At.68912 ProteinModelPortal:Q5BPR8 PRIDE:Q5BPR8
EnsemblPlants:AT2G40520.1 EnsemblPlants:AT2G40520.2
EnsemblPlants:AT2G40520.3 EnsemblPlants:AT2G40520.4 GeneID:818647
KEGG:ath:AT2G40520 TAIR:At2g40520 HOGENOM:HOG000084944
InParanoid:Q5BPR8 OMA:EKFFREC PhylomeDB:Q5BPR8
ProtClustDB:CLSN2680151 Genevestigator:Q5BPR8 Uniprot:Q5BPR8
Length = 502
Score = 922 (329.6 bits), Expect = 6.2e-98, Sum P(3) = 6.2e-98
Identities = 180/355 (50%), Positives = 247/355 (69%)
Query: 32 TAIGAEYWQRAEEATQGIIAQVQPTVVSEERRKAVIDYVQRLIRNYLGCEVFPFGSVPLK 91
T I AE W AE Q I+ +QP ++E R +I +Q L+ LG EV+ FGS+PLK
Sbjct: 26 TPIEAEVWLIAEARAQEILCAIQPNYLAERSRNKIISNLQTLLWERLGIEVYLFGSMPLK 85
Query: 92 TYLPDGDIDLTAFGGLNVEEALANDVCSVLEREDQNKAAEFVVKDAQLIRAEVKLVKCLV 151
TYLPDGDIDLT EE A VC VLE E N ++ V Q ++A+VK++KC +
Sbjct: 86 TYLPDGDIDLTVLTHHASEEDCARAVCCVLEAEMGN--SDLQVTGVQYVQAKVKVIKCSI 143
Query: 152 QNIVVDISFNQLGGLSTLCFLEQVDRLIGKDHLFKRSIILIKAWCYYESRILGAHHGLIS 211
+++ DISFNQL GL LCFLEQVD+ G+DHLFK+SIIL+KAWC+YESRILGA+ GLIS
Sbjct: 144 RDVAFDISFNQLAGLGALCFLEQVDKAFGRDHLFKKSIILVKAWCFYESRILGANSGLIS 203
Query: 212 TYALETLVLYIFHLFHSSLNGPLAVLYKFLDYFSKFDWDSYCISLNGPVRISSLPEVVVE 271
TYAL LVL I ++ +SSL+GPLAVLYKF++Y+ FDW +YC+++ GPV ISSLP++
Sbjct: 204 TYALAILVLNIVNMSYSSLSGPLAVLYKFINYYGSFDWKNYCVTVTGPVPISSLPDIT-- 261
Query: 272 TPENSGGDLLLSSEFLKECVEQFSVPSRGFDTNSRSFPPKHLNIVDPLKENNNLGRSVSK 331
E ++ L +F +EC+E +S + + + + FP K+ NI+DPLK +NNLGRSV+K
Sbjct: 262 --ETGNHEVFLDEKFFRECMELYSGETGVVEASRKYFPVKYYNILDPLKHSNNLGRSVTK 319
Query: 332 GNFYRIRSAFTYGARKLGHILSQPEESLTDELRKFFSNTLDRHGSGQRPDVQDPV 386
GN R+R+ F G +KL +L+ P E++ +L KFF+ +L+R+G GQR DV++PV
Sbjct: 320 GNMVRLRNCFMLGVQKLRDVLTLPGENVGWKLEKFFNVSLERNGKGQRQDVEEPV 374
Score = 44 (20.5 bits), Expect = 6.2e-98, Sum P(3) = 6.2e-98
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 598 ANSLSDLSGDYESHQISLNHVWWWYEHALNSSYSP 632
A S L GD++ ++ +L + W++ +L++ P
Sbjct: 381 AADYSQLKGDFDRYRNNLIYGKWFHGESLHNWLPP 415
Score = 40 (19.1 bits), Expect = 6.2e-98, Sum P(3) = 6.2e-98
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 684 PGASFGMEEMPKHR---GTGTYFP 704
P + +++ P +R GTGTY P
Sbjct: 444 PTSMPNIKQSPNNRRSNGTGTYIP 467
>TAIR|locus:2164047 [details] [associations]
symbol:AT5G53770 "AT5G53770" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009688 "abscisic acid
biosynthetic process" evidence=RCA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:CP002688 eggNOG:COG5260 InterPro:IPR002058
KO:K03514 GO:GO:0016779 EMBL:BT002764 IPI:IPI00522291
RefSeq:NP_568798.1 UniGene:At.6981 ProteinModelPortal:Q84WU1
SMR:Q84WU1 PaxDb:Q84WU1 PRIDE:Q84WU1 EnsemblPlants:AT5G53770.1
GeneID:835458 KEGG:ath:AT5G53770 TAIR:At5g53770 InParanoid:Q84WU1
OMA:FFDFYGR PhylomeDB:Q84WU1 ProtClustDB:CLSN2690011
ArrayExpress:Q84WU1 Genevestigator:Q84WU1 Uniprot:Q84WU1
Length = 530
Score = 117 (46.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 50/202 (24%), Positives = 89/202 (44%)
Query: 55 PTVVSEERRKAVIDYVQRLIRNYL--GCEVFPFGSVPLKTYLPDGDIDLTAFGGLNVEEA 112
PT + R A ++ V +I+ Y+ C+V FGS YLP DID+ +E
Sbjct: 134 PTQAEKAERDAAVESVSSVIK-YIWPSCKVEVFGSYKTGLYLPTSDIDVVI-----LESG 187
Query: 113 LANDVCSVLEREDQNKAAEFVVKDAQLI-RAEVKLVKCLVQ--NIVVDISFNQLGGLSTL 169
L N L + + + K+ +I +A V ++K + + NI D+SF+ G
Sbjct: 188 LTNPQLG-LRALSRALSQRGIAKNLLVIAKARVPIIKFVEKKSNIAFDLSFDMENGPKAA 246
Query: 170 CFLEQVDRLIGKDHLFKRSIILIKAWCYYESRILG-AHHGLISTYALETLVLYIFHLFHS 228
F++ + K + +++K + + R L + G I +YAL +++
Sbjct: 247 EFIQDA---VSKLPPLRPLCLILKV--FLQQRELNEVYSGGIGSYALLAMLIAFLKYLKD 301
Query: 229 SLNGP---LAVLY-KFLDYFSK 246
+ P L VL KF D++ +
Sbjct: 302 GRSAPEHNLGVLLVKFFDFYGR 323
Score = 84 (34.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 43/143 (30%), Positives = 64/143 (44%)
Query: 294 FSVPSRGFDTNSRSFPPKHLNIVDPLKENNNLGRSVSKGNFYRIRSAFTYGARKLGH--- 350
FS ++GF +R P ++I DP N++G+S N+++IRSAF L +
Sbjct: 341 FSKYNKGFLNRAR---PSLISIEDPQTPENDIGKS--SFNYFQIRSAFAMALSTLTNTKA 395
Query: 351 ILSQ-PEESLTDELRKFFSNTLDRHGSGQRPDVQ---------DPVPLSRYNGFGVSSTF 400
ILS P S+ + + +R G GQ DV +P+PL NG F
Sbjct: 396 ILSLGPNRSILGTIIRPDRVLSERKG-GQNGDVTFNSLLPGAGEPLPLES-NGKTNGGLF 453
Query: 401 SGTELCREDQTIYESEPNSSGIT 423
EL E++ S P + IT
Sbjct: 454 CNWELEEEEEE--GSFPRGNDIT 474
>POMBASE|SPCC663.12 [details] [associations]
symbol:cid12 "poly(A) polymerase Cid12" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IGI;IMP] [GO:0031134
"sister chromatid biorientation" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
[GO:0043631 "RNA polyadenylation" evidence=ISM] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051315 "attachment of spindle
microtubules to kinetochore involved in mitotic sister chromatid
segregation" evidence=IMP] PomBase:SPCC663.12 Pfam:PF03828
GO:GO:0005829 GO:GO:0005524 GO:GO:0000077 GO:GO:0007094
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003723
GO:GO:0030702 GO:GO:0031048 GO:GO:0031134 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 PIR:T41543 RefSeq:NP_588273.1
ProteinModelPortal:O74518 STRING:O74518 EnsemblFungi:SPCC663.12.1
GeneID:2539423 KEGG:spo:SPCC663.12 KO:K11700 OrthoDB:EOG4B8NQ6
NextBio:20800587 GO:GO:0031380 GO:GO:0043631 Uniprot:O74518
Length = 336
Score = 130 (50.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 60/224 (26%), Positives = 111/224 (49%)
Query: 53 VQPTVVSEERRKAVIDYVQRLIRNY-LGCEVFPFGSVPLKTYLPDGDIDLTAFGGLNVEE 111
V P + + RK +++ +Q IR L E+ +GS+ + T L D+D++ V E
Sbjct: 31 VSPKIEELKYRKLLLEKLQTHIREVVLDAELQVYGSMYIGTTLSISDVDVS-LKSPRVGE 89
Query: 112 ALANDVCSVLEREDQNKAAEFVVKDAQLIRAEVKLVKCLVQNIVVDISFNQLGGLSTLCF 171
V VL R+ + A+F A++ R + LV V I VD++F G C
Sbjct: 90 LEKRRVTMVL-RKYLDADADFH-SSARVPR--INLVD--VSGIGVDLTF----GNDKACR 139
Query: 172 LEQVDRLIGKDH-LFKRSIILIKAWCYYESRILGAHHGLISTYALETLVL-YIFHLFHSS 229
++ + ++H +F R ++L+K W + E + HHG I++ AL +++ ++ FH
Sbjct: 140 TAELQKAYNEEHPIFGRLLMLLKHWLF-ERDLENVHHGGIASCALSYMLIGWLEMRFHKK 198
Query: 230 -LNG---PL-AVLYKFLDYFSKFDWDSYCISLNGPVRISSLPEV 268
++ P+ A+L KF YF +W +Y + + P+ +P++
Sbjct: 199 GIDSEVQPIRALLQKFF-YFWGVEW-TYELFVLRPLTGQIVPKL 240
Score = 55 (24.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 310 PKHLNIVDPLKENNNLGRSVSKGNFYRIRSAFTYGARKL 348
P L+I DP+ NN++G+ + + I++AF A +L
Sbjct: 250 PNLLSIEDPIDRNNDIGKQSFQISM--IKAAFVASANEL 286
>TAIR|locus:2063937 [details] [associations]
symbol:HESO1 "HEN1 suppressor 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IDA] [GO:0071076 "RNA 3'
uridylation" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GO:GO:0071076 GO:GO:0016779 UniGene:At.21484
UniGene:At.37137 EMBL:BT015881 EMBL:BT020198 IPI:IPI00527276
RefSeq:NP_181504.2 ProteinModelPortal:Q5XET5 SMR:Q5XET5
IntAct:Q5XET5 PRIDE:Q5XET5 EnsemblPlants:AT2G39740.1 GeneID:818559
KEGG:ath:AT2G39740 TAIR:At2g39740 InParanoid:Q5XET5 OMA:VEDPFEQ
PhylomeDB:Q5XET5 ProtClustDB:CLSN2681710 Genevestigator:Q5XET5
Uniprot:Q5XET5
Length = 511
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 76/291 (26%), Positives = 134/291 (46%)
Query: 79 GCEVFPFGSVPLKTYLPDGDIDLTA--FGGLNVEEALANDVCSVLEREDQN-KAAEFVVK 135
G V PFGS + GD+D++ F G ++ ++L + +A+ K
Sbjct: 47 GATVQPFGSFVSNLFTRWGDLDISVDLFSGSSILFTGKKQKQTLLGHLLRALRASGLWYK 106
Query: 136 DAQLIRAEVKLVKCLV--QNIVVDISFNQLGGLSTLCFLEQVDRLIGKDHLFKRSIILIK 193
+I A V ++K + Q I DIS + L GL FL + + G+ F+ ++L+K
Sbjct: 107 LQFVIHARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGR---FRDLVLLVK 163
Query: 194 AWCYYESRILGAHHGLISTYALETLVLYIFHLFHSSLNGPLAVLY--KFLDYFS---KFD 248
W + I + G ++Y+L LV++ F ++ PL V+Y +D + K
Sbjct: 164 EWAKAHN-INDSKTGTFNSYSLSLLVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTA 222
Query: 249 WDSYC-ISLNGPVRISSLPEVVVETPENSGGDLLLS--SEF--LKECVEQFSV-PSRG-F 301
+S ++ R S E +S +LL+S ++F + ++F V P G +
Sbjct: 223 EESIAQVTAANIARFKS--ERAKSVNRSSLSELLVSFFAKFSDINVKAQEFGVCPFTGRW 280
Query: 302 DT--NSRSFPPK--HLNIVDPLKENNNLGRSVSKGNFYRIRSAFTYGARKL 348
+T ++ ++ PK L + DP ++ N RSVS+ N RI F +R+L
Sbjct: 281 ETISSNTTWLPKTYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRL 331
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 52/200 (26%), Positives = 95/200 (47%)
Query: 47 QGIIAQVQPTVVSEERRKAVIDYVQRLIRNY---LGCEVFPFGSVPLKTYLPDGDIDLTA 103
Q I+ ++PT + R VID ++ ++++ G V PFGS + GD+D++
Sbjct: 12 QEILQVIKPTRADRDTRITVIDQLRDVLQSVECLRGATVQPFGSFVSNLFTRWGDLDISV 71
Query: 104 --FGGLNVEEALANDVCSVLEREDQN-KAAEFVVKDAQLIRAEVKLVKCLV--QNIVVDI 158
F G ++ ++L + +A+ K +I A V ++K + Q I DI
Sbjct: 72 DLFSGSSILFTGKKQKQTLLGHLLRALRASGLWYKLQFVIHARVPILKVVSGHQRISCDI 131
Query: 159 SFNQLGGLSTLCFLEQVDRLIGKDHLFKRSIILIKAWCYYESRILGAHHGLISTYALETL 218
S + L GL FL + + G+ F+ ++L+K W + I + G ++Y+L L
Sbjct: 132 SIDNLDGLLKSRFLFWISEIDGR---FRDLVLLVKEWAKAHN-INDSKTGTFNSYSLSLL 187
Query: 219 VLYIFHLFHSSLNGPLAVLY 238
V++ F ++ PL V+Y
Sbjct: 188 VIFHFQTCVPAILPPLRVIY 207
>POMBASE|SPAC12G12.13c [details] [associations]
symbol:cid14 "poly(A) polymerase Cid14" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0007000 "nucleolus organization" evidence=IMP] [GO:0016075
"rRNA catabolic process" evidence=IGI] [GO:0016077 "snoRNA
catabolic process" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031125 "rRNA 3'-end processing"
evidence=IGI] [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630
"ncRNA polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0065007 "biological regulation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC12G12.13c Pfam:PF03828
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006397
GO:GO:0003723 GO:GO:0031499 GO:GO:0043630 GO:GO:0016075
GO:GO:0016077 GO:GO:0016078 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 PIR:S62544 RefSeq:NP_001018181.1
ProteinModelPortal:Q9UTN3 STRING:Q9UTN3
EnsemblFungi:SPAC12G12.13c.1 GeneID:3361384 KEGG:spo:SPAC12G12.13c
KO:K03514 OMA:LISHEEE OrthoDB:EOG43BQXK NextBio:20811434
GO:GO:0065007 GO:GO:0007000 GO:GO:0031125 Uniprot:Q9UTN3
Length = 684
Score = 141 (54.7 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 50 IAQVQPTVVSEERRKAVIDYV-QRLIRNYLGCEVFPFGSVPLKTYLPDGDIDLTAFGGLN 108
I + PT RK ++ + Q +++ + ++ FGS K YLP D+DL +
Sbjct: 249 IDYITPTPEEHAVRKTLVSRINQAVLQKWPDVSLYVFGSFETKLYLPTSDLDLVIISPEH 308
Query: 109 VEEALANDVCSVLEREDQNKAAEFVVKDAQLIR-AEVKLVKCL--VQNIVVDISFNQLGG 165
D+ + + K A + Q+I A V ++K + + + VDISFNQ GG
Sbjct: 309 HYRGTKKDMFVLAHHLKKLKLAS----EVQVITTANVPIIKFVDPLTKVHVDISFNQPGG 364
Query: 166 LSTLCFLEQVDRLIGKDHLFKRSIILIKAWCYYESRILG-AHHGLISTYALETLVLYIFH 224
L T C + V+ + K + +I+IK + R L G +S+YA+ LV+
Sbjct: 365 LKT-CLV--VNGFMKKYPALRPLVIIIKH--FLNMRALNEVFLGGLSSYAIVCLVVSFLQ 419
Query: 225 LFHSSLN-GPL-------AVLYKFLDYFSK-FDWDSYCISL-NG 258
L H L+ G + +L +FL+ + K F +D+ I++ NG
Sbjct: 420 L-HPRLSTGSMREEDNFGVLLLEFLELYGKQFYYDAVGIAVHNG 462
>UNIPROTKB|F1NCH7 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
EMBL:AADN02038455 EMBL:AADN02038456 EMBL:AADN02038457
IPI:IPI00597559 Ensembl:ENSGALT00000006125 Uniprot:F1NCH7
Length = 501
Score = 90 (36.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 38/111 (34%), Positives = 52/111 (46%)
Query: 60 EER-RKAVIDYVQRLIRN-YLGCEVFPFGSVPLKTYLPDGDIDLTAFGGLNVEEALANDV 117
EER R V++ ++ +I+ + +V FGS YLP DIDL FG E L
Sbjct: 18 EERMRMEVVNRIENVIKELWPNADVQIFGSFKTGLYLPTSDIDLVVFGKW---ETLPLWT 74
Query: 118 CSVLEREDQNKAAEFVVKDAQLIRAEVKLVKCL--VQNIVVDISFNQLGGL 166
R+ N A E VK L +A V ++K + VDISFN G+
Sbjct: 75 LEEALRK-HNVADENSVK--VLDKATVPIIKLTDSFTEVKVDISFNVQNGV 122
Score = 79 (32.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 56/247 (22%), Positives = 100/247 (40%)
Query: 308 FPPKHLNIVDPLKENNNLGRSVSKGNFYRIRSAFTYGARKLGHILSQ-----PEESLTDE 362
+ P L I DPL+ N++GRS S G +++ AF Y L H +S P
Sbjct: 234 YRPSMLYIEDPLQPGNDVGRS-SYGAM-QVKQAFDYAYVVLSHAVSPIAKYYPNNETESI 291
Query: 363 LRKFFSNTLD----RHGSGQRPDVQDPVPLSRYNGFGVSSTFSGTELCREDQTIYESEPN 418
L + T + R ++ +Q S NG GV+ +L + + + E E
Sbjct: 292 LGRIIRVTQEVATYRDWISKQWGMQSRTE-SSCNGNGVTLIVDNQQLDKCNNNLAE-ENE 349
Query: 419 SSGITENCRIDD----EAETINEPHNSGNGTAVSETRLSGDAKDLATSKNLNLVISNETS 474
+ G N + + + + P +S + T S + + D TSK L+ T+
Sbjct: 350 ALGKPRNKTSETLSKHSSNSSSGPLSSSSSTLSSSSDVDSDGTPCKTSKQLSCR-QPTTN 408
Query: 475 KCSS--LSGEESKARHAPHLYFSSSTMGN-GEIRNGNSEWKQQLNSG-SAEKNVTSGILP 530
+ S +S E S++ + +T N + ++G++ + N G N + G
Sbjct: 409 RVGSQEVSLESSQSSGKTQNSQTGNTSSNTNKSQHGSARLFRSSNKGFQGPANSSHGTSV 468
Query: 531 THYKETG 537
T+ + G
Sbjct: 469 TNKQHQG 475
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 710 700 0.00082 121 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 628 (67 KB)
Total size of DFA: 391 KB (2191 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.89u 0.11s 67.00t Elapsed: 00:00:04
Total cpu time: 66.89u 0.11s 67.00t Elapsed: 00:00:04
Start: Mon May 20 21:55:24 2013 End: Mon May 20 21:55:28 2013