Query 005183
Match_columns 710
No_of_seqs 452 out of 2471
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 19:25:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005183.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005183hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2413 Xaa-Pro aminopeptidase 100.0 1E-131 2E-136 1071.6 42.8 589 83-707 10-606 (606)
2 PRK09795 aminopeptidase; Provi 100.0 3.1E-60 6.7E-65 518.4 38.4 344 254-661 2-355 (361)
3 COG0006 PepP Xaa-Pro aminopept 100.0 6.7E-60 1.5E-64 520.0 36.2 363 246-662 4-381 (384)
4 TIGR02993 ectoine_eutD ectoine 100.0 6.5E-58 1.4E-62 504.3 36.0 360 245-662 4-388 (391)
5 PRK14575 putative peptidase; P 100.0 2.4E-55 5.2E-60 485.7 36.4 355 255-661 12-402 (406)
6 PRK14576 putative endopeptidas 100.0 6E-54 1.3E-58 474.4 36.2 354 256-661 13-401 (405)
7 PRK10879 proline aminopeptidas 100.0 1.5E-49 3.2E-54 442.6 35.4 361 249-666 3-430 (438)
8 PRK15173 peptidase; Provisiona 100.0 4.1E-49 8.9E-54 423.1 30.3 278 333-661 36-319 (323)
9 PRK13607 proline dipeptidase; 100.0 4.9E-44 1.1E-48 397.5 30.4 233 398-656 147-438 (443)
10 PRK12897 methionine aminopepti 100.0 6.5E-44 1.4E-48 370.1 26.2 221 411-656 3-247 (248)
11 PRK07281 methionine aminopepti 100.0 1.9E-43 4.1E-48 371.1 26.8 228 410-661 2-284 (286)
12 PRK12318 methionine aminopepti 100.0 6.7E-43 1.5E-47 369.0 27.6 230 405-659 35-291 (291)
13 TIGR00500 met_pdase_I methioni 100.0 5.3E-42 1.1E-46 355.7 26.8 221 411-656 2-246 (247)
14 PRK05716 methionine aminopepti 100.0 6.6E-42 1.4E-46 356.0 26.8 227 409-660 2-252 (252)
15 cd01085 APP X-Prolyl Aminopept 100.0 6.2E-42 1.3E-46 349.0 25.8 217 420-639 1-219 (224)
16 PRK12896 methionine aminopepti 100.0 7E-41 1.5E-45 348.9 26.4 224 408-656 6-254 (255)
17 cd01090 Creatinase Creatine am 100.0 6.2E-41 1.3E-45 343.0 25.6 214 418-656 1-228 (228)
18 KOG2414 Putative Xaa-Pro amino 100.0 9E-41 2E-45 346.4 26.6 376 231-665 42-481 (488)
19 cd01087 Prolidase Prolidase. E 100.0 7.9E-41 1.7E-45 346.1 24.6 212 418-656 1-243 (243)
20 KOG2737 Putative metallopeptid 100.0 5E-41 1.1E-45 344.5 21.9 244 404-668 177-478 (492)
21 PLN03158 methionine aminopepti 100.0 2.7E-40 5.9E-45 359.8 28.8 237 404-664 129-389 (396)
22 cd01092 APP-like Similar to Pr 100.0 2.9E-38 6.3E-43 318.7 25.2 204 418-637 1-206 (208)
23 cd01086 MetAP1 Methionine Amin 100.0 2.7E-38 5.8E-43 326.1 25.3 214 418-656 1-238 (238)
24 cd01091 CDC68-like Related to 100.0 3.7E-38 8.1E-43 324.8 23.8 217 418-656 1-243 (243)
25 PF00557 Peptidase_M24: Metall 100.0 8.6E-37 1.9E-41 308.0 21.5 203 419-636 1-207 (207)
26 cd01066 APP_MetAP A family inc 100.0 1E-34 2.3E-39 290.8 24.6 203 418-637 1-205 (207)
27 cd01089 PA2G4-like Related to 100.0 1.8E-34 3.8E-39 295.7 22.5 208 418-656 1-228 (228)
28 COG0024 Map Methionine aminope 100.0 2.3E-30 5.1E-35 263.2 25.8 222 412-658 5-253 (255)
29 TIGR00495 crvDNA_42K 42K curve 100.0 1.1E-28 2.4E-33 269.6 27.9 199 410-619 11-232 (389)
30 PRK08671 methionine aminopepti 100.0 6.3E-29 1.4E-33 263.2 23.4 195 417-627 1-196 (291)
31 PTZ00053 methionine aminopepti 100.0 6.9E-29 1.5E-33 272.5 23.6 195 411-619 151-360 (470)
32 TIGR00501 met_pdase_II methion 100.0 1.9E-28 4.2E-33 259.7 22.8 199 415-629 2-201 (295)
33 KOG2738 Putative methionine am 100.0 1.6E-28 3.5E-33 245.8 20.2 223 411-657 115-360 (369)
34 cd01088 MetAP2 Methionine Amin 100.0 1E-27 2.3E-32 253.9 22.2 195 418-628 1-196 (291)
35 KOG1189 Global transcriptional 99.9 1.6E-24 3.5E-29 238.7 26.4 263 395-680 120-401 (960)
36 COG5406 Nucleosome binding fac 99.8 4.2E-18 9E-23 184.7 20.3 231 397-637 155-410 (1001)
37 PRK09795 aminopeptidase; Provi 99.7 1.7E-14 3.7E-19 158.0 28.0 109 83-208 2-112 (361)
38 PF01321 Creatinase_N: Creatin 99.6 6.1E-15 1.3E-19 137.2 8.2 124 84-228 1-130 (132)
39 PF01321 Creatinase_N: Creatin 99.4 2.8E-13 6.1E-18 126.0 8.5 128 255-412 1-132 (132)
40 KOG2775 Metallopeptidase [Gene 99.2 5.4E-10 1.2E-14 113.3 15.5 181 427-616 90-284 (397)
41 KOG2776 Metallopeptidase [Gene 99.2 2.9E-09 6.4E-14 110.9 21.0 155 410-573 13-182 (398)
42 TIGR02993 ectoine_eutD ectoine 99.1 7.7E-09 1.7E-13 114.7 23.2 132 79-228 9-156 (391)
43 PRK14575 putative peptidase; P 98.9 7.1E-07 1.5E-11 99.5 26.4 129 82-228 10-176 (406)
44 COG0006 PepP Xaa-Pro aminopept 98.8 8.2E-07 1.8E-11 98.4 23.9 131 80-228 9-152 (384)
45 PRK14576 putative endopeptidas 98.6 3.1E-06 6.8E-11 94.3 21.0 127 84-228 12-175 (405)
46 KOG2413 Xaa-Pro aminopeptidase 97.7 8E-05 1.7E-09 83.4 8.4 107 255-370 11-132 (606)
47 PLN03158 methionine aminopepti 96.9 0.0054 1.2E-07 67.9 10.2 115 514-636 126-247 (396)
48 cd01086 MetAP1 Methionine Amin 96.5 0.019 4E-07 59.2 11.1 99 530-636 2-105 (238)
49 cd01088 MetAP2 Methionine Amin 96.3 0.027 5.8E-07 60.1 11.1 97 530-634 2-98 (291)
50 COG0024 Map Methionine aminope 95.9 0.041 8.8E-07 57.1 9.4 99 531-635 13-115 (255)
51 PRK05716 methionine aminopepti 95.8 0.066 1.4E-06 55.6 11.0 97 531-634 13-113 (252)
52 PRK12896 methionine aminopepti 95.3 0.1 2.2E-06 54.3 10.1 107 520-635 5-119 (255)
53 PF05195 AMP_N: Aminopeptidase 95.1 0.13 2.8E-06 48.3 9.2 98 248-355 2-127 (134)
54 KOG2738 Putative methionine am 93.8 0.26 5.6E-06 51.3 8.3 98 531-637 124-227 (369)
55 TIGR00495 crvDNA_42K 42K curve 92.6 1.1 2.3E-05 50.0 11.7 103 531-636 21-130 (389)
56 TIGR00501 met_pdase_II methion 92.6 1.1 2.3E-05 48.0 11.3 95 531-635 7-103 (295)
57 PRK08671 methionine aminopepti 91.5 2.1 4.6E-05 45.6 12.2 96 530-635 3-100 (291)
58 cd01087 Prolidase Prolidase. E 90.4 2.5 5.4E-05 43.6 11.1 94 531-634 3-97 (243)
59 cd01092 APP-like Similar to Pr 90.2 2.3 5.1E-05 42.3 10.5 97 531-636 3-100 (208)
60 PRK12897 methionine aminopepti 90.1 3 6.5E-05 43.3 11.4 96 532-634 13-112 (248)
61 PF00557 Peptidase_M24: Metall 89.9 2.3 4.9E-05 42.5 10.1 94 531-634 2-98 (207)
62 TIGR00500 met_pdase_I methioni 88.4 4.3 9.2E-05 42.0 11.1 95 532-635 12-112 (247)
63 PTZ00053 methionine aminopepti 88.4 4.5 9.8E-05 45.8 11.9 92 533-634 162-261 (470)
64 cd01090 Creatinase Creatine am 88.3 4.3 9.3E-05 41.6 10.9 96 531-635 3-105 (228)
65 cd01089 PA2G4-like Related to 88.2 5.2 0.00011 40.9 11.5 100 531-636 3-112 (228)
66 PRK07281 methionine aminopepti 87.6 4.2 9E-05 43.3 10.5 82 532-618 13-101 (286)
67 cd01066 APP_MetAP A family inc 86.8 4.8 0.0001 39.5 10.0 96 531-635 3-98 (207)
68 PRK12318 methionine aminopepti 86.6 5.7 0.00012 42.4 11.0 95 532-634 52-153 (291)
69 PF14826 FACT-Spt16_Nlob: FACT 84.8 2.1 4.6E-05 41.6 6.0 137 81-218 6-159 (163)
70 cd01085 APP X-Prolyl Aminopept 78.4 14 0.00029 37.9 9.6 96 531-634 5-106 (224)
71 PRK10879 proline aminopeptidas 77.2 20 0.00044 40.5 11.5 92 532-634 182-276 (438)
72 cd01091 CDC68-like Related to 70.1 35 0.00076 35.3 10.3 99 421-527 121-234 (243)
73 PRK15173 peptidase; Provisiona 69.7 39 0.00085 36.6 11.0 93 533-635 105-198 (323)
74 PF05195 AMP_N: Aminopeptidase 69.7 4.4 9.6E-05 37.9 3.2 65 81-149 6-77 (134)
75 KOG2775 Metallopeptidase [Gene 66.2 30 0.00066 36.6 8.5 84 532-622 88-177 (397)
76 KOG2776 Metallopeptidase [Gene 62.3 37 0.00079 36.9 8.5 98 532-637 24-133 (398)
77 TIGR03241 arg_catab_astB succi 60.2 41 0.00089 37.0 8.5 146 238-455 257-415 (443)
78 PF14826 FACT-Spt16_Nlob: FACT 50.1 53 0.0011 31.9 6.9 58 249-314 3-78 (163)
79 PF00486 Trans_reg_C: Transcri 37.0 42 0.00092 27.3 3.5 58 196-269 6-63 (77)
80 KOG2414 Putative Xaa-Pro amino 33.4 90 0.0019 34.7 6.0 68 78-149 64-140 (488)
81 TIGR00035 asp_race aspartate r 30.0 4.8E+02 0.011 26.4 10.7 138 78-275 57-195 (229)
82 PRK13607 proline dipeptidase; 27.8 3.2E+02 0.007 31.0 9.7 94 532-633 170-263 (443)
83 smart00862 Trans_reg_C Transcr 25.8 96 0.0021 25.1 3.8 58 196-268 6-63 (78)
84 PF07385 DUF1498: Protein of u 25.3 65 0.0014 32.8 3.1 51 601-658 153-206 (225)
85 PRK00865 glutamate racemase; P 23.0 1.9E+02 0.0041 30.2 6.2 70 187-276 6-76 (261)
86 cd00383 trans_reg_C Effector d 22.7 1.1E+02 0.0024 25.8 3.8 58 196-269 24-81 (95)
87 COG2861 Uncharacterized protei 21.9 3E+02 0.0064 28.6 7.0 124 68-218 92-240 (250)
No 1
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-132 Score=1071.62 Aligned_cols=589 Identities=55% Similarity=0.913 Sum_probs=556.5
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHHHHhhcCCcE
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSSSW 162 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e~~~~~ 162 (710)
.++.++|+.|+. .+++|||||+.|+|||||++++|+|++|||||+||+|++|||..+|+|||||||+.||++|++++|
T Consensus 10 ~~~~~~~~~~~~--~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsag~Avit~~~a~lwtD~RY~~QA~~qld~~W 87 (606)
T KOG2413|consen 10 FELMRLRELMKS--PPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSAGTAVITEEEAALWTDGRYFQQAEQQLDSNW 87 (606)
T ss_pred HHHHHHHHHhcC--CCceEEEccCCchhhhhhhcchhhhhhhhcccCCCcceEEEecCcceEEEccHHHHHHHhhhcccc
Confidence 478899999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCcccc
Q 005183 163 ILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRV 242 (710)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~ 242 (710)
++|+.+.. ++++.+||.++++.+++|||||.++|++.|+++.+.|..++++++++ ..||||.+|+ +||++|.+|++.
T Consensus 88 ~l~k~~~~-~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i-~~nLVD~iW~-~rP~~~~~~v~~ 164 (606)
T KOG2413|consen 88 TLMKMGED-VPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSLTSKGLELVPI-PGNLVDEIWG-DRPERPGNPVIV 164 (606)
T ss_pred eeeeccCC-CccHHHHHHHhCCCccccccCcceechhHHHhHHHHHhhCCCeEeec-cccchhhhhc-cCCccCCCceEE
Confidence 99999876 89999999999999999999999999999999999999999999999 7999999997 999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHh
Q 005183 243 HALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 322 (710)
Q Consensus 243 ~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~ 322 (710)
++.+|+|.++..|+..||+.|++.+++|+|+|++++|+||.|+||+|+||||||++|++|+.++..||+|+.|++.+...
T Consensus 165 l~~~~~G~~~~~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~ 244 (606)
T KOG2413|consen 165 LDLEFAGLSVDDKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKK 244 (606)
T ss_pred eeccccCcchhHHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCeEEeecccHHHHHHHHHhc--CCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCccc
Q 005183 323 HLKNAGVELRPYNSILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGV 400 (710)
Q Consensus 323 ~l~~~~V~i~~y~~i~~~l~~l~~~--~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 400 (710)
++...+|+++||+++...++.++.. ..++++.+ ..++.+...+.+ ...+
T Consensus 245 ~~~~~~v~i~pY~~i~~~i~~~~~~~~~~~i~ia~-~~~~~i~~~i~~----------------------------~~~~ 295 (606)
T KOG2413|consen 245 HLREDGVEIRPYDQIWSDIKNWASAFADKKIWISP-ETNYGIGELIGE----------------------------DHSM 295 (606)
T ss_pred HHhhCceeeeeHHHHHHHHHHHhcccCceeEeecc-cceeeecccccc----------------------------cccc
Confidence 9998999999999999999998753 44666655 455554433322 2235
Q ss_pred ccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEee-
Q 005183 401 FRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGS- 479 (710)
Q Consensus 401 d~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~s- 479 (710)
...++|..+|++||+.|+++||.|+.++++|++++++|+++++.++..+||.+++.+++++|.++.++.+.||+||+++
T Consensus 296 ~~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~ 375 (606)
T KOG2413|consen 296 IDPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSV 375 (606)
T ss_pred cccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccC
Confidence 5678999999999999999999999999999999999999998544449999999999999999999999999999977
Q ss_pred CCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHH
Q 005183 480 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (710)
Q Consensus 480 G~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~ 559 (710)
|+|+|++||.|.+++++++.+..+++||+|+||..+|||+|||+++|+||+++++.|+.|+++|+++.+++||+|+.+..
T Consensus 376 G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 376 GPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcCccccccccCCccccCCCcccccCC-CCccccCCCEEEECceeeecCcceEEEEEeEEEeecC
Q 005183 560 LDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYG-NMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVG 638 (710)
Q Consensus 560 v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~~i~~~~~-~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~ 638 (710)
+|.++|..+|+.|++|.|+||||||+||+|||+|..|++++. +...|++||++++|||||.+|.|||||||+++|.+.+
T Consensus 456 lD~laR~~LW~~gLDy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~vvd~~ 535 (606)
T KOG2413|consen 456 LDALARSALWKAGLDYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAG 535 (606)
T ss_pred hHHHHHHHHHhhccccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEEEEecc
Confidence 999999999999999999999999999999999999988743 6778999999999999999999999999999999998
Q ss_pred CCCCCCCcccccceecccCCccccccccccCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHHHHHHccccc
Q 005183 639 TPNRFGGVSYLGFEKLTFVPIQTKLVDLSLLSAAEIDWLNNYHSQVWEKVSPLLDG----FARQWLWNNTRPV 707 (710)
Q Consensus 639 ~~~~~~~~~~lg~E~LT~~P~~~~lI~~~ll~~~e~~~ln~yh~~v~~~~~p~l~~----~~~~wl~~~t~~~ 707 (710)
++++| ..||+||.||.+|+++++||++||+++|++|||.||++||++++|+|.+ ++++||+++|+||
T Consensus 536 ~~~~~--~~~L~fe~lT~vP~q~klid~~LLs~eE~~~LN~Yh~~v~~~i~~~L~~~~~~~~~~WL~~~t~Pi 606 (606)
T KOG2413|consen 536 TKHNF--RGFLTFEPLTLVPYQTKLIDKSLLSEEEINWLNEYHAKVRSKIGPELQKEGRMEEYKWLINATQPI 606 (606)
T ss_pred ccccc--cceeeeccceecceecccCChhhCCHHHHHHHHHHHHHHHHhccHHHhhccchhHHHHHHhhccCC
Confidence 88888 6799999999999999999999999999999999999999999999984 7899999999997
No 2
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=3.1e-60 Score=518.41 Aligned_cols=344 Identities=26% Similarity=0.340 Sum_probs=295.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEEee
Q 005183 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRP 333 (710)
Q Consensus 254 ~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l~~~~V~i~~ 333 (710)
+|+++||+.|+++++|+++|++++|++|||||+|+. ++++|+.++..||+|. ++..++...+....+.+..
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td~-ry~~qa~~~~~~~~v~~~~ 72 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVDS-RYYADVEARAQGYQLHLLD 72 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcCc-chHHHHHhhCCCceEEEec
Confidence 589999999999999999999999999999999865 6888999989999995 5666665555433333332
Q ss_pred cc-cHHHHHHHHHh--cCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCcccccc
Q 005183 334 YN-SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 410 (710)
Q Consensus 334 y~-~i~~~l~~l~~--~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR 410 (710)
.. .+.+.+.++.. +.++||+|...+++..++.|.+.+ +..+++. .+..+|
T Consensus 73 ~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l-------------------------~~~~~~~--~~~~lR 125 (361)
T PRK09795 73 ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSEL-------------------------NAKLVSA--TPDVLR 125 (361)
T ss_pred CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhc-------------------------Ccccccc--cHHHHh
Confidence 22 23455555543 246899999999999998887642 1223433 378999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccC
Q 005183 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKP 490 (710)
Q Consensus 411 avKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p 490 (710)
+|||++||+.||+|+++++.++..+.+.+ ++|+||.|+++.++.... ..|....+|++|+++|+|+++||+.|
T Consensus 126 ~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~~G~tE~e~~~~~~~~~~-~~G~~~~~f~~iv~sG~~~~~ph~~~ 198 (361)
T PRK09795 126 QIKTPEEVEKIRLACGIADRGAEHIRRFI------QAGMSEREIAAELEWFMR-QQGAEKASFDTIVASGWRGALPHGKA 198 (361)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HCCCCcCCCCeEEEEeccccccCCCC
Confidence 99999999999999999999998887776 999999999999987654 56888899999999999999999999
Q ss_pred CCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCC--CCH---HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005183 491 EPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE--PTA---REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (710)
Q Consensus 491 ~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~--pt~---e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar 565 (710)
++ ++|++||+|++|+|+.|+||++|+||||++|. +++ +++++|+.+++++.+++++++| |++++||+.+++
T Consensus 199 ~~---~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~~~~~v~~~~~ 274 (361)
T PRK09795 199 SD---KIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GVRCQQVDDAAR 274 (361)
T ss_pred CC---ceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHH
Confidence 76 89999999999999999999999999999963 233 3789999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCCCCCC
Q 005183 566 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 643 (710)
Q Consensus 566 ~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~~~~~ 643 (710)
+++++.|+ .|.|++||||| +++||.|. ++ ++++.+|++||||+||||+|.+|.+|+|+||+|+||++
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt~~------ 343 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIG--IEVHEDPR-FS--PRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQ------ 343 (361)
T ss_pred HHHHHcCCCccCCCCCCccCC--ccccCCCC-cC--CCCCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEECCC------
Confidence 99999999 47899999999 99999997 54 34789999999999999999999999999999999999
Q ss_pred CCcccccceecccCCccc
Q 005183 644 GGVSYLGFEKLTFVPIQT 661 (710)
Q Consensus 644 ~~~~~lg~E~LT~~P~~~ 661 (710)
|+|+||..|+++
T Consensus 344 ------G~e~Lt~~~~~l 355 (361)
T PRK09795 344 ------GAEVLYAMPKTV 355 (361)
T ss_pred ------CcEeCcCCCceE
Confidence 999999999654
No 3
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-60 Score=520.03 Aligned_cols=363 Identities=30% Similarity=0.401 Sum_probs=301.8
Q ss_pred cccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEe-CCceEEEEeCCCCCHHHHhhh
Q 005183 246 KYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMDHL 324 (710)
Q Consensus 246 ~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~-~~~~~Lfvd~~k~~~~~~~~l 324 (710)
.++..++..|+.+++..|.++++|++++++..|+.||||++.. .+.. . ..+++. .+.++||++..... .+....
T Consensus 4 ~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~~--~~~~-~-~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 78 (384)
T COG0006 4 RFADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAF--GFER-L-QALLVPAEGEPVLFVRGRDEE-AAKETS 78 (384)
T ss_pred ccchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCCC--cccc-e-EEEEEcCCCceEEEEcchhHH-HHHhhc
Confidence 4566788999999999999999999999999999999999851 1111 1 234444 45589999855422 222222
Q ss_pred hc--CCeEEeec--------ccHHHHHHHHHhcCCEEEEeCCC--CcHHHHHHHHHHHHHHhhhccccccccccccCCCC
Q 005183 325 KN--AGVELRPY--------NSILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 392 (710)
Q Consensus 325 ~~--~~V~i~~y--------~~i~~~l~~l~~~~~~i~ld~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (710)
.. .++..... +.+...+........++|++... ++...+..++..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~---------------------- 136 (384)
T COG0006 79 WIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAAL---------------------- 136 (384)
T ss_pred ccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhC----------------------
Confidence 11 12222111 12233333333336789999875 6777777776643
Q ss_pred CCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q 005183 393 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 472 (710)
Q Consensus 393 ~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~s 472 (710)
+..+++++++++..+|+|||+.||+.||+|+.+++.|+.++++++ ++|+||.|++++++..+. ..|..+++
T Consensus 137 --~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~------~~g~tE~ev~a~l~~~~~-~~G~~~~s 207 (384)
T COG0006 137 --PRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAI------RPGMTEAEIAAELEYALR-KGGAEGPS 207 (384)
T ss_pred --CCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCCCccC
Confidence 234789999999999999999999999999999999999999988 899999999999998765 46677789
Q ss_pred CceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 005183 473 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFP 552 (710)
Q Consensus 473 f~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P 552 (710)
|++|+++|+|+++|||.|++ +.+++||+|+||+|++|.|||+|+||||++|+|+++|+++|+.|++|+.++++++||
T Consensus 208 f~~iv~~G~n~a~pH~~~~~---~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rp 284 (384)
T COG0006 208 FDTIVASGENAALPHYTPSD---RKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRP 284 (384)
T ss_pred cCcEEeccccccCcCCCCCc---ccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999987 888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEE
Q 005183 553 QSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIEN 630 (710)
Q Consensus 553 ~G~~~~~v~~~ar~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd 630 (710)
|+++.+||.++|+++++.|+ +|.|++|||||+++++||.|..+. +++..+|+||||||+|||+|.+|.+||||||
T Consensus 285 -G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~--~~~~~~L~~GMv~t~Epg~y~~g~~GirIEd 361 (384)
T COG0006 285 -GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS--PGSDTTLEPGMVFSIEPGIYIPGGGGVRIED 361 (384)
T ss_pred -CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccC--CCCCccccCCcEEEeccccccCCCceEEEEE
Confidence 99999999999999999666 799999999999999999995233 4588999999999999999999999999999
Q ss_pred eEEEeecCCCCCCCCcccccceecccCCcccc
Q 005183 631 LLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 662 (710)
Q Consensus 631 ~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~ 662 (710)
+|+||++ |+|+||..|++..
T Consensus 362 ~vlVte~------------G~e~LT~~~~~~~ 381 (384)
T COG0006 362 TVLVTED------------GFEVLTRVPKELL 381 (384)
T ss_pred EEEEcCC------------CceecccCCccee
Confidence 9999998 9999997775543
No 4
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=6.5e-58 Score=504.33 Aligned_cols=360 Identities=17% Similarity=0.198 Sum_probs=295.1
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEe-CCceEEEEeCCCCCHHHHh-
Q 005183 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMD- 322 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~-~~~~~Lfvd~~k~~~~~~~- 322 (710)
..|+..|+++|++++|+.|+++|+|++|++++.||+|||||++.. ..+ ..+++|+ +++++|+++..... .+..
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~-~~~---~~~l~v~~~~~~~l~~~~~~~~-~~~~~ 78 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWS-FYV---HQCVLLPPEGEPIWYGRGQDAN-GAKRT 78 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCc-eEE---EEEEEEcCCCceEEEehhhhhh-hHhhe
Confidence 458889999999999999999999999999999999999998643 112 2456666 55677777633221 1211
Q ss_pred -hhhcCCeEEeec-------------ccHHHHHHHHHhcCCEEEEeCCC--CcHHHHHHHHHHHHHHhhhcccccccccc
Q 005183 323 -HLKNAGVELRPY-------------NSILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKM 386 (710)
Q Consensus 323 -~l~~~~V~i~~y-------------~~i~~~l~~l~~~~~~i~ld~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 386 (710)
++... .+..| +.+.+.+++++...++||+|.+. +++..++.|++.+
T Consensus 79 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l---------------- 140 (391)
T TIGR02993 79 AFMDHD--NIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHL---------------- 140 (391)
T ss_pred eecccc--ceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhC----------------
Confidence 11111 12222 12333444333234589999875 7899999888753
Q ss_pred ccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh--
Q 005183 387 HTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK-- 464 (710)
Q Consensus 387 ~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~-- 464 (710)
|+.+++|+++++..+|+|||++||+.||+|+++++.++.++.+.+ ++|+||.|+++.+......
T Consensus 141 --------~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~~~~ 206 (391)
T TIGR02993 141 --------PNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERI------EPGMRKCDLVADIYDAGIRGV 206 (391)
T ss_pred --------CCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHhhhhcc
Confidence 567889999999999999999999999999999999999888776 9999999999988653222
Q ss_pred -hCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHH
Q 005183 465 -QSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGH 543 (710)
Q Consensus 465 -~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~ 543 (710)
..|...++|.+|+++|+|+++||+.|++ ++|++||++++|+|+.|+||++|+||||++|+|+++++++|+.+++++
T Consensus 207 ~~~g~~~~~~~~iv~sG~~~a~pH~~~~~---~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~ 283 (391)
T TIGR02993 207 DGFGGDYPAIVPLLPSGADASAPHLTWDD---SPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGM 283 (391)
T ss_pred cCcCCCcCCcccccccCccccCCCCCCCC---CcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 1234456788899999999999999876 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccccCCC----cccccCCCCccccCCCEEEECceee
Q 005183 544 IALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQ----SISFRYGNMTPLVEGMIVSNEPGYY 619 (710)
Q Consensus 544 ~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~----~i~~~~~~~~~L~~GMV~siEPgiy 619 (710)
.+++++++| |+++++|+.++++++++.|+...|++||||| +++|+.+. .++ ++++.+|++||||++|||+|
T Consensus 284 ~~~i~~ikp-G~~~~dv~~~~~~~~~~~G~~~~h~~GhgiG--l~~~~~~~e~~~~l~--~~~~~~L~~GMv~tvEpgiy 358 (391)
T TIGR02993 284 EAGLEAAKP-GNTCEDIANAFFAVLKKYGIHKDSRTGYPIG--LSYPPDWGERTMSLR--PGDNTVLKPGMTFHFMTGLW 358 (391)
T ss_pred HHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccCCCceeeec--cCcCCCCCCcccccc--CCCCceecCCCEEEEcceeE
Confidence 999999999 9999999999999999999987899999999 88874321 233 45789999999999999999
Q ss_pred ecCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCcccc
Q 005183 620 EDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 662 (710)
Q Consensus 620 ~~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~ 662 (710)
.++ +|+||||+|+||++ |+|.||.+|+++-
T Consensus 359 ~~~-~Gvried~v~VT~~------------G~e~Lt~~p~~l~ 388 (391)
T TIGR02993 359 MED-WGLEITESILITET------------GVECLSSVPRKLF 388 (391)
T ss_pred eCC-CCeEEeeEEEECCC------------cceecccCCcccE
Confidence 997 59999999999999 9999999996653
No 5
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=2.4e-55 Score=485.68 Aligned_cols=355 Identities=17% Similarity=0.176 Sum_probs=290.1
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCC-CCCceeEEEEEEeCC-c-eE-EEEeCCCCCHHHH-hhh--hcC
Q 005183 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD-R-AK-LFVDDSKVTPDVM-DHL--KNA 327 (710)
Q Consensus 255 Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di-~~~Pv~~a~liV~~~-~-~~-Lfvd~~k~~~~~~-~~l--~~~ 327 (710)
-++++|+.|+++|+|++||++++|++||||+.+... .++|...+.++|+.+ + +. ++++..+... ++ +.. ...
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~~-~~~~~~~~~~~ 90 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAAS-LTLDMPNAELK 90 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhhh-hcccccccccc
Confidence 467899999999999999999999999999987542 345655566788765 3 55 5555433221 11 100 000
Q ss_pred Ce----E-Eeec------------------c----cHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhcccc
Q 005183 328 GV----E-LRPY------------------N----SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNK 380 (710)
Q Consensus 328 ~V----~-i~~y------------------~----~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~ 380 (710)
.+ + ..+| + .+.+.|++....+++||+|.+.++...++.|+..+
T Consensus 91 ~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~l---------- 160 (406)
T PRK14575 91 TFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM---------- 160 (406)
T ss_pred cCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHHHhC----------
Confidence 11 0 1123 2 12233433333468999999999999999887643
Q ss_pred ccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 005183 381 KSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLE 460 (710)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~ 460 (710)
|+.+++|+++.+..+|+|||++||+.||+|++++++++.++++.+ ++|+||.|+++.+..
T Consensus 161 --------------p~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~elaa~~~~ 220 (406)
T PRK14575 161 --------------PNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKA 220 (406)
T ss_pred --------------CCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHH
Confidence 567899999999999999999999999999999999999888776 999999999999976
Q ss_pred HHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHH
Q 005183 461 FRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVL 540 (710)
Q Consensus 461 ~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl 540 (710)
.... .|....++.+++++|++ +.+|+.|++ +++++||+|++|+|+.|+||++|+||||++|+|+++|+++|++++
T Consensus 221 ~~~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~ 295 (406)
T PRK14575 221 AVMS-KSETHFSRFHLISVGAD-FSPKLIPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIR 295 (406)
T ss_pred HHHH-cCCCcCCcCceEEECCC-cccCCCCCC---CcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHH
Confidence 5543 34434444478889988 568998876 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECcee
Q 005183 541 QGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGY 618 (710)
Q Consensus 541 ~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgi 618 (710)
+++.++++++|| |+++++|++++++++++.|+ .+.|++|||||+++++||.|. +.. +++.+|++||||++|||+
T Consensus 296 ~a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~-i~~--~~~~~Le~GMv~tiEpgi 371 (406)
T PRK14575 296 TGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPF-VST--HATESFTSGMVLSLETPY 371 (406)
T ss_pred HHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCC-CCC--CCCCCcCCCCEEEECCee
Confidence 999999999999 99999999999999999999 367999999997779999997 442 478899999999999999
Q ss_pred eecCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCccc
Q 005183 619 YEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 661 (710)
Q Consensus 619 y~~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~ 661 (710)
|.++.+|+|+||+|+||++ |+|+||.+|+++
T Consensus 372 y~~g~gGvriEDtvlVT~~------------G~e~LT~~p~~l 402 (406)
T PRK14575 372 YGYNLGSIMIEDMILINKE------------GIEFLSKLPRDL 402 (406)
T ss_pred ecCCCcEEEEEeEEEEcCC------------CcccCCCCCccc
Confidence 9999999999999999999 999999999543
No 6
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=6e-54 Score=474.39 Aligned_cols=354 Identities=17% Similarity=0.173 Sum_probs=287.6
Q ss_pred HHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCC-CCCceeEEEEEEeCC--ce-EEEEeCCCCCHHHH-----hhhhc
Q 005183 256 LSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD--RA-KLFVDDSKVTPDVM-----DHLKN 326 (710)
Q Consensus 256 l~~lr~~L~e~glDallis~~dnIaYLtg~rg~di-~~~Pv~~a~liV~~~--~~-~Lfvd~~k~~~~~~-----~~l~~ 326 (710)
-+++|+.|+++|+|++|+++++||+||||+.+..+ ..++....+++++.+ ++ .++++..... .++ ..+..
T Consensus 13 ~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~-~~~~~~~~~~~~~ 91 (405)
T PRK14576 13 SRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAA-STHFDMPNSVLKT 91 (405)
T ss_pred HHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhh-hhhcccccccccc
Confidence 45899999999999999999999999999997632 233444456666544 34 5566533211 111 01111
Q ss_pred CCe--E-Eeec---------------------ccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhcccccc
Q 005183 327 AGV--E-LRPY---------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKS 382 (710)
Q Consensus 327 ~~V--~-i~~y---------------------~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 382 (710)
..+ + ..++ +.+.+.|++++..+++||+|.+.++...+..|...+
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~~------------ 159 (405)
T PRK14576 92 FPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKVA------------ 159 (405)
T ss_pred CCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhhC------------
Confidence 000 0 0111 122344444444568999999888888887776532
Q ss_pred ccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 005183 383 KTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR 462 (710)
Q Consensus 383 ~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~ 462 (710)
|+.+++|+++.+..+|+|||+.||+.||+|+.+++.++.++++.+ ++|+||.|+++.++...
T Consensus 160 ------------~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i------~pG~tE~elaa~~~~~~ 221 (405)
T PRK14576 160 ------------PGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKI------RVGCTAAELTAAFKAAV 221 (405)
T ss_pred ------------CCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999888776 99999999999998765
Q ss_pred HhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHH
Q 005183 463 SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQG 542 (710)
Q Consensus 463 ~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a 542 (710)
.. .|....++.+++++|++ +.+|+.|++ +.+++||+|++|+|+.|+||++|+||||++|+|+++|+++|++++++
T Consensus 222 ~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a 296 (405)
T PRK14576 222 MS-FPETNFSRFNLISVGDN-FSPKIIADT---TPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTG 296 (405)
T ss_pred HH-cCCCcCCCCCEEEECCc-ccCCCCCCC---cccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHH
Confidence 43 44333444589999999 568998876 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeee
Q 005183 543 HIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE 620 (710)
Q Consensus 543 ~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~ 620 (710)
+.++++++|| |++++||+.++++++.+.|+. +.|++|||||+++.+||.|. +. ++++.+|++||||++||++|.
T Consensus 297 ~~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~-i~--~~~~~~Le~GMv~~vEp~~y~ 372 (405)
T PRK14576 297 HEHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPF-VS--TQATETFCPGMVLSLETPYYG 372 (405)
T ss_pred HHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCC-cC--CCCCCccCCCCEEEECCceee
Confidence 9999999999 999999999999999999983 56899999998788999997 54 347889999999999999999
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCccc
Q 005183 621 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 661 (710)
Q Consensus 621 ~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~ 661 (710)
+|.+|+|+||+|+||++ |+|+||..|+++
T Consensus 373 ~g~ggvriEDtvlVTe~------------G~e~LT~~p~~l 401 (405)
T PRK14576 373 IGVGSIMLEDMILITDS------------GFEFLSKLDRDL 401 (405)
T ss_pred cCCCEEEEeeEEEECCC------------ccccCCCCCccc
Confidence 99999999999999999 999999999543
No 7
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.5e-49 Score=442.64 Aligned_cols=361 Identities=21% Similarity=0.246 Sum_probs=281.7
Q ss_pred chhHHHHHHHHHHHHHHcCCCEEEEccc----------------chhhhhcCCCCCCCCCCceeEEEEEEeC-C----ce
Q 005183 249 GLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVPHSPVMYAYLIVEM-D----RA 307 (710)
Q Consensus 249 g~~~~~Kl~~lr~~L~e~glDallis~~----------------dnIaYLtg~rg~di~~~Pv~~a~liV~~-~----~~ 307 (710)
..+|..|+++|.+.|.+.+ ++||.+. .|+.||||+.-.+ ++|++.+ + ..
T Consensus 3 ~~~~~~rR~~l~~~~~~~~--~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~--------~~lv~~~~~~~~~~~ 72 (438)
T PRK10879 3 QQEFQRRRQALLAKMQPGS--AALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNHS 72 (438)
T ss_pred hHHHHHHHHHHHhhCCCCc--EEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCC--------eEEEEecCCCCCCeE
Confidence 4688999999999997633 3444332 3688999986443 5566533 2 36
Q ss_pred EEEEeCCCCCHH--------HHhhhhcCCe-EEeecccHHHHHHHHHhcCCEEEEeCCCCcH---H---HHHHHHHHHHH
Q 005183 308 KLFVDDSKVTPD--------VMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNA---A---IMNTYEIAIEK 372 (710)
Q Consensus 308 ~Lfvd~~k~~~~--------~~~~l~~~~V-~i~~y~~i~~~l~~l~~~~~~i~ld~~~~~~---~---~~~~L~~~~~~ 372 (710)
+||+++.....+ ..+.....++ ++.+++++.+.|..+..+...+..+....+. . ..+.+.....
T Consensus 73 ~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (438)
T PRK10879 73 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSR- 151 (438)
T ss_pred EEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhc-
Confidence 899974321111 1111122456 4888999999998877655566665443221 1 1222221100
Q ss_pred HhhhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHH
Q 005183 373 YLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEV 452 (710)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ 452 (710)
....+..+++|+.+.+..+|+|||++||+.||+|+.+++.++.++++.+ ++|+||.
T Consensus 152 ------------------~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~pG~tE~ 207 (438)
T PRK10879 152 ------------------QNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKC------RPGMFEY 207 (438)
T ss_pred ------------------cccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcHH
Confidence 0111345688999999999999999999999999999999999988776 8999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeC-CCCCHH
Q 005183 453 DVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAR 531 (710)
Q Consensus 453 ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~-G~pt~e 531 (710)
|+++.++.... ..|....+|++|+++|.|++++||.|++ +.|++||+|++|+|+.|+||++|+||||++ |+++++
T Consensus 208 ei~a~~~~~~~-~~G~~~~~~~~iv~~G~na~~~H~~~~~---~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~ 283 (438)
T PRK10879 208 QLEGEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---SEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPA 283 (438)
T ss_pred HHHHHHHHHHH-HCCCCCCCCCcEEEEcCccccccCCCCc---cccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHH
Confidence 99999877544 4677778999999999999999999876 889999999999999999999999999998 899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH----H--------------cCC--CCcCccccccccCCcccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLW----K--------------IGL--DYRHGTGHGVGAALNVHE 591 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~----~--------------~G~--~~~h~~GHGIG~~l~vhE 591 (710)
|+++|++|++++.+++++++| |+++.+|+.++++.+. + .|+ .|.|++||+|| +++||
T Consensus 284 q~~~y~~vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG--ldvHd 360 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG--LDVHD 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC--cCcCc
Confidence 999999999999999999999 9999999999886543 2 333 57999999999 99999
Q ss_pred CCCcccccCCCCccccCCCEEEECceeeecC---------cceEEEEEeEEEeecCCCCCCCCcccccceeccc-CCccc
Q 005183 592 GPQSISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQT 661 (710)
Q Consensus 592 ~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g---------~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~-~P~~~ 661 (710)
.|. +. ++++.+|+|||||++|||+|.+. .+||||||+|+||++ |+|+||. +|++.
T Consensus 361 ~~~-~~--~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~~------------G~e~LT~~~pk~~ 425 (438)
T PRK10879 361 VGV-YG--QDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKKP 425 (438)
T ss_pred CCC-cC--CCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECCC------------cCeEcCccCCCCH
Confidence 886 33 34678999999999999999863 269999999999999 9999995 99877
Q ss_pred ccccc
Q 005183 662 KLVDL 666 (710)
Q Consensus 662 ~lI~~ 666 (710)
+.|+.
T Consensus 426 ~~iE~ 430 (438)
T PRK10879 426 DEIEA 430 (438)
T ss_pred HHHHH
Confidence 66653
No 8
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=4.1e-49 Score=423.08 Aligned_cols=278 Identities=19% Similarity=0.193 Sum_probs=241.9
Q ss_pred ecccHHHHHH----HHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCcccc
Q 005183 333 PYNSILSEIK----SLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAF 408 (710)
Q Consensus 333 ~y~~i~~~l~----~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~ 408 (710)
+.+.+.+.|+ +++...++||+|.+.+++..++.|++.+ |+++++|+++++..
T Consensus 36 ~~~~~~~~l~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~l------------------------~~~~~~d~~~~i~~ 91 (323)
T PRK15173 36 PIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM------------------------PNVDFVDSSSIFNE 91 (323)
T ss_pred cHHHHHHHHHHHHHHcCccCCEEEEecCccCHHHHHHHHhhC------------------------CCCeEEEhHHHHHH
Confidence 3444444444 4444567999999999999999988753 56789999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccc
Q 005183 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHY 488 (710)
Q Consensus 409 lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~ 488 (710)
+|+||||+||+.||+|+++++.++..+++.+ ++|+||.|+++.++..... .|....++.+++++|++. .+|+
T Consensus 92 lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~~G~tE~el~a~~~~~~~~-~g~~~~~~~~~i~~G~~~-~~h~ 163 (323)
T PRK15173 92 LRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKAAVMS-KSETHFSRFHLISVGADF-SPKL 163 (323)
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCCCCCCCcEEEECCCC-ccCC
Confidence 9999999999999999999999998887766 8999999999999765443 344344444678889874 5898
Q ss_pred cCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 005183 489 KPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSL 568 (710)
Q Consensus 489 ~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l 568 (710)
.|++ +.+++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++.+++++++| |+++++|+.++++++
T Consensus 164 ~~~~---~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irP-G~~~~dv~~a~~~~~ 239 (323)
T PRK15173 164 IPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVI 239 (323)
T ss_pred CCCC---CccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHH
Confidence 8876 889999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCCCCCCCCc
Q 005183 569 WKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGV 646 (710)
Q Consensus 569 ~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~~~~~~~~ 646 (710)
++.|+ .+.|++|||||+++++||.|. +.. +++.+|++||||++|||+|.++.+|+|+||+|+||++
T Consensus 240 ~~~G~~~~~~~~~GHGiG~~lg~~E~P~-i~~--~~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVTe~--------- 307 (323)
T PRK15173 240 KKSGLPNYNRGHLGHGNGVFLGLEESPF-VST--HATESFTSGMVLSLETPYYGYNLGSIMIEDMILINKE--------- 307 (323)
T ss_pred HHcCCccccCCCCCCcCCCCCCcCCCCC-CCC--CCCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEcCC---------
Confidence 99998 366889999997779999997 432 4678999999999999999999999999999999999
Q ss_pred ccccceecccCCccc
Q 005183 647 SYLGFEKLTFVPIQT 661 (710)
Q Consensus 647 ~~lg~E~LT~~P~~~ 661 (710)
|+|+||..|+++
T Consensus 308 ---G~e~LT~~p~~l 319 (323)
T PRK15173 308 ---GIEFLSKLPRDL 319 (323)
T ss_pred ---cceeCCCCCccc
Confidence 999999999553
No 9
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=4.9e-44 Score=397.46 Aligned_cols=233 Identities=25% Similarity=0.282 Sum_probs=199.5
Q ss_pred cccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeE
Q 005183 398 AGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTIS 477 (710)
Q Consensus 398 ~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv 477 (710)
+..+....+..+|+|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.+... ...+....+|++|+
T Consensus 147 ~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~tE~ei~~~~~~~--~~~~~~~~~y~~iv 218 (443)
T PRK13607 147 NPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAF------RAGMSEFDINLAYLTA--TGQRDNDVPYGNIV 218 (443)
T ss_pred ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh------hcCCCHHHHHHHHHHH--hCCCCcCCCCCcEE
Confidence 344566778899999999999999999999999999888766 8999999999876432 23345568999999
Q ss_pred eeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCh
Q 005183 478 GSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPG 557 (710)
Q Consensus 478 ~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~ 557 (710)
++|+|++++||.+++ .+.+++||+|++|+|+.|+||++|+||||+ |+++++++++|+++++++.+++++++| |+++
T Consensus 219 a~G~naa~~H~~~~~--~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikP-G~~~ 294 (443)
T PRK13607 219 ALNEHAAVLHYTKLD--HQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKP-GVSY 294 (443)
T ss_pred EecCcceEecCCccC--CCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccC-CCCH
Confidence 999999999999875 246899999999999999999999999999 889999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHH----Hc--------------CC---CCcCccccccccCCccccCCCccc-------------ccCCCC
Q 005183 558 FVLDAFARSSLW----KI--------------GL---DYRHGTGHGVGAALNVHEGPQSIS-------------FRYGNM 603 (710)
Q Consensus 558 ~~v~~~ar~~l~----~~--------------G~---~~~h~~GHGIG~~l~vhE~P~~i~-------------~~~~~~ 603 (710)
.||+.++++.+. +. |+ .|+|++||+|| |++||.+.... ......
T Consensus 295 ~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iG--ldvHd~~~~~~~~~~~~~~~~~~~~~l~~~ 372 (443)
T PRK13607 295 VDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLG--LQVHDVAGFMQDDRGTHLAAPEKHPYLRCT 372 (443)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccC--cccccCCCcccccccccccccccccccccC
Confidence 999999987663 22 33 47899999999 99999753100 000145
Q ss_pred ccccCCCEEEECceeeecC-------------------------cceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 604 TPLVEGMIVSNEPGYYEDH-------------------------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g-------------------------~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
.+|+||||||||||+|+++ .|||||||+|+||++ |+|+||.
T Consensus 373 ~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~------------G~e~Lt~ 438 (443)
T PRK13607 373 RVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHEN------------GVENMTR 438 (443)
T ss_pred CcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCC------------CCeECCh
Confidence 7899999999999999974 579999999999999 9999995
No 10
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=6.5e-44 Score=370.07 Aligned_cols=221 Identities=18% Similarity=0.183 Sum_probs=200.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCCCcc
Q 005183 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANGAI 485 (710)
Q Consensus 411 avKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~-----~~sf~~iv~sG~n~a~ 485 (710)
.||||+||+.||+|+++++.++..+++.+ ++|+||.|+++.++....+ .|.. ..+|++++++|+|++.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~------~~G~tE~el~~~~~~~~~~-~G~~~~~~~~~~~~~~i~~g~n~~~ 75 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIM------KPGITTKEINTFVEAYLEK-HGATSEQKGYNGYPYAICASVNDEM 75 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEeccCCEe
Confidence 69999999999999999999998887766 9999999999999876543 4544 2478888999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005183 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (710)
Q Consensus 486 ~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar 565 (710)
+|+.|++ ++|++||+|++|+|+.|.||++|+||||++|+|+++|+++|+.+++++.+++++++| |++++||+.+++
T Consensus 76 ~H~~p~~---~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kp-G~~~~dv~~a~~ 151 (248)
T PRK12897 76 CHAFPAD---VPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVI-GNRVGDIGYAIE 151 (248)
T ss_pred ecCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCccchHHHHHH
Confidence 9999986 889999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEEEECceee-----------------ecCcceE
Q 005183 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYY-----------------EDHAFGI 626 (710)
Q Consensus 566 ~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~siEPgiy-----------------~~g~~Gi 626 (710)
+++++.|+. +.|++||||| +++||.|..... +++++.+|+|||||++|||+| .+|.+|+
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~ 229 (248)
T PRK12897 152 SYVANEGFSVARDFTGHGIG--KEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSA 229 (248)
T ss_pred HHHHHcCCccCCCeEECccC--CcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEe
Confidence 999999994 6899999999 999999984322 234678999999999999999 3677899
Q ss_pred EEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 627 riEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
|+||||+||++ |+|+||.
T Consensus 230 r~edtv~Vt~~------------G~e~lt~ 247 (248)
T PRK12897 230 QYEHTIAITKD------------GPIILTK 247 (248)
T ss_pred ecceEEEEeCC------------ccEEeec
Confidence 99999999999 9999995
No 11
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.9e-43 Score=371.10 Aligned_cols=228 Identities=18% Similarity=0.171 Sum_probs=202.3
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhC------CCC--CCCCceeEeeCC
Q 005183 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS------GFL--DTSFDTISGSGA 481 (710)
Q Consensus 410 RavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~------g~~--~~sf~~iv~sG~ 481 (710)
..+||++||+.||+|+++++.++.++.+.+ +||+||.|+++.++....+.+ |+. ..+|++++++|.
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~ 75 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLI------KPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGL 75 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEec
Confidence 469999999999999999999988777666 999999999999987654321 122 268999999999
Q ss_pred CCccccccCCCCCCcccCCCCeEEEecce---------------------------eeCCeEeeeEeeeeCCCCCHHHHH
Q 005183 482 NGAIIHYKPEPGKCSVVDSKKLFLLDSGA---------------------------QYVDGTTDITRTVHFGEPTAREKE 534 (710)
Q Consensus 482 n~a~~h~~p~~~~~~~l~~gd~vliD~g~---------------------------~y~gy~tDitRT~~~G~pt~e~~~ 534 (710)
|++++|+.|++ ++|++||+|++|+|+ .|+||++|+||||++|+|+++|++
T Consensus 76 n~~~~H~~p~~---~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~ 152 (286)
T PRK07281 76 NDEVAHAFPRH---YILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKN 152 (286)
T ss_pred cccccCCCCCC---cCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHH
Confidence 99999999986 899999999999997 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEE
Q 005183 535 CFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIV 612 (710)
Q Consensus 535 ~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~ 612 (710)
+|+++++++.+++++++| |++++||+.++++++.+.|+. +.|++||||| +++||.|..... .++++.+|+|||||
T Consensus 153 l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG--l~~hE~P~i~~~~~~~~~~~Le~GMV~ 229 (286)
T PRK07281 153 LMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG--PTMHEEPMVPNYGTAGRGLRLREGMVL 229 (286)
T ss_pred HHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC--CccCCCCcCCCcccCCCCCEECCCCEE
Confidence 999999999999999999 999999999999999999984 7799999999 999999973222 23467899999999
Q ss_pred EECceeee------------------cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCccc
Q 005183 613 SNEPGYYE------------------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 661 (710)
Q Consensus 613 siEPgiy~------------------~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~ 661 (710)
++||++|. +|.+|+|+||+|+||++ |+|+||..+.++
T Consensus 230 tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~------------G~e~LT~~~~~~ 284 (286)
T PRK07281 230 TIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKD------------GPVILTSQGEER 284 (286)
T ss_pred EECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCC------------cceECCCCCccc
Confidence 99999986 45678999999999999 999999887654
No 12
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=6.7e-43 Score=369.03 Aligned_cols=230 Identities=20% Similarity=0.226 Sum_probs=202.6
Q ss_pred ccccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCC-------CCCCCcee
Q 005183 405 PIAFSKA-VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-------LDTSFDTI 476 (710)
Q Consensus 405 ~i~~lRa-vKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~-------~~~sf~~i 476 (710)
.+..++. |||++||+.||+|+++++.++.++++.+ ++|+||.|+++.++.+.. ..|. ...+|+++
T Consensus 35 ~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~i------rpG~tE~Eiaa~~~~~~~-~~G~~~~~~~~~~~~f~~~ 107 (291)
T PRK12318 35 YASQYDIIIKTPEQIEKIRKACQVTARILDALCEAA------KEGVTTNELDELSRELHK-EYNAIPAPLNYGSPPFPKT 107 (291)
T ss_pred ccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HcCCCccccccCCCCCCcc
Confidence 3455665 9999999999999999999999888776 999999999988876543 3343 13578899
Q ss_pred EeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 005183 477 SGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTP 556 (710)
Q Consensus 477 v~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~ 556 (710)
+++|.|++++|+.|++ ++|++||+|++|+|+.|.||++|+||||++|+|+++|+++|+.+++++.+++++++| |++
T Consensus 108 v~~g~n~~~~H~~p~~---~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~ 183 (291)
T PRK12318 108 ICTSLNEVICHGIPND---IPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKP-GIP 183 (291)
T ss_pred eEeeccceeecCCCCC---CccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCC
Confidence 9999999999999976 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred hHHHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcc---------eE
Q 005183 557 GFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAF---------GI 626 (710)
Q Consensus 557 ~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~---------Gi 626 (710)
+++|+.++++++++.|+. ..|.+||||| +++||.|......++++.+|++||||++||++|.++.+ |+
T Consensus 184 ~~dv~~a~~~~~~~~G~~~~~~~~GHgIG--l~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~ 261 (291)
T PRK12318 184 LYEIGEVIENCADKYGFSVVDQFVGHGVG--IKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEA 261 (291)
T ss_pred HHHHHHHHHHHHHHcCCccCCCcccCCcC--ccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEE
Confidence 999999999999999995 5789999999 99999998444344467899999999999999987433 33
Q ss_pred ---------EEEEeEEEeecCCCCCCCCcccccceecccCCc
Q 005183 627 ---------RIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPI 659 (710)
Q Consensus 627 ---------riEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~ 659 (710)
++||||+||++ |+|+||..|+
T Consensus 262 ~~~~g~~~~~~edtv~VTe~------------G~e~LT~~~~ 291 (291)
T PRK12318 262 RTCDNQPSAQWEHTILITET------------GYEILTLLDK 291 (291)
T ss_pred EecCCCeeeeeeeEEEEcCC------------cceeCCCCCC
Confidence 47999999999 9999999883
No 13
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=5.3e-42 Score=355.73 Aligned_cols=221 Identities=19% Similarity=0.219 Sum_probs=197.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCCCcc
Q 005183 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAI 485 (710)
Q Consensus 411 avKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~n~a~ 485 (710)
+|||++||+.||+|++++++++..+++.+ ++|+||.|+++.++.... ..|... .+|++++++|.|+++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~n~~~ 74 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREV------KPGVSTKELDRIAKDFIE-KHGAKPAFLGYYGFPGSVCISVNEVV 74 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HCCCCccccCCCCCCceeEeccccEE
Confidence 69999999999999999999998887666 999999999999987654 345321 357788899999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005183 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (710)
Q Consensus 486 ~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar 565 (710)
+|+.|++ ++|++||+|++|+|+.|+||++|++||+++|+|+++|+++|+++++++.+++++++| |+++.+|+.+++
T Consensus 75 ~H~~~~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~ 150 (247)
T TIGR00500 75 IHGIPDK---KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKP-GNRIGEIGAAIQ 150 (247)
T ss_pred EecCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 9999976 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------CcceE
Q 005183 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAFGI 626 (710)
Q Consensus 566 ~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------g~~Gi 626 (710)
+.+.+.|+. +.|.+||||| +.+||.|...+. .++++.+|++||||++||++|.+ +.+|+
T Consensus 151 ~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (247)
T TIGR00500 151 KYAEAKGFSVVREYCGHGIG--RKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSA 228 (247)
T ss_pred HHHHHcCCEeccCccCCccC--cccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEE
Confidence 999999994 6688999999 999999963322 13467899999999999999973 56899
Q ss_pred EEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 627 riEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
|+||+|+||++ |+|+||.
T Consensus 229 ried~v~Vt~~------------G~e~Lt~ 246 (247)
T TIGR00500 229 QFEHTIVITDN------------GPEILTE 246 (247)
T ss_pred EEeEEEEEcCC------------ccEEccC
Confidence 99999999999 9999984
No 14
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=6.6e-42 Score=356.03 Aligned_cols=227 Identities=22% Similarity=0.219 Sum_probs=203.4
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCCC
Q 005183 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANG 483 (710)
Q Consensus 409 lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~-----~~sf~~iv~sG~n~ 483 (710)
+-+|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.+.....+ .|.. ..+|++++++|.|+
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i------~pG~se~ela~~~~~~~~~-~G~~~~~~~~~~~~~~~~~g~~~ 74 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHV------KPGVTTKELDRIAEEYIRD-QGAIPAPLGYHGFPKSICTSVNE 74 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-CCCEecccCCCCCCcCeEecccc
Confidence 3579999999999999999999998887766 9999999999998776543 4432 24677888999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHH
Q 005183 484 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 563 (710)
Q Consensus 484 a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ 563 (710)
..+|+.|++ +.|++||+|++|+|+.|.||++|++||+++|+|+++++++|+.+++++.+++++++| |++++||+.+
T Consensus 75 ~~~h~~~~~---~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~dv~~~ 150 (252)
T PRK05716 75 VVCHGIPSD---KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKP-GARLGDIGHA 150 (252)
T ss_pred eeecCCCCC---cccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 999999876 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeee-----------------cCcc
Q 005183 564 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYE-----------------DHAF 624 (710)
Q Consensus 564 ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~-----------------~g~~ 624 (710)
+++.+++.|+. ..|.+||||| +.+||.|..+++ .++++.+|+|||||++||++|. +|.+
T Consensus 151 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~ 228 (252)
T PRK05716 151 IQKYAEAEGFSVVREYCGHGIG--RKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSL 228 (252)
T ss_pred HHHHHHHcCCeeecCccccccC--CccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCc
Confidence 99999999995 5688999999 999999974332 3457889999999999999997 6778
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCCcc
Q 005183 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (710)
Q Consensus 625 GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~ 660 (710)
|+|+||+|+||++ |+|.||..|.+
T Consensus 229 g~~~ed~v~Vt~~------------G~e~Lt~~~~~ 252 (252)
T PRK05716 229 SAQYEHTVAVTED------------GPEILTLRPEE 252 (252)
T ss_pred EEeeeeEEEEcCC------------ccEEeeCCCCC
Confidence 9999999999999 99999998853
No 15
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=6.2e-42 Score=349.04 Aligned_cols=217 Identities=59% Similarity=0.965 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005183 420 GMLNSHLRDAAALAQFWVWLEEEIHNGAK--LTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (710)
Q Consensus 420 ~mR~A~~~~~~al~~~~~~l~~~i~~~~g--~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~ 497 (710)
+||.|+.+++.++.+.++++.+.+ ++| +||.||++.+++++....++.+.+|++++++|+|++++|+.|++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i--~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~ 78 (224)
T cd01085 1 GMRAAHIRDGVALVEFLAWLEQEV--PKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRK 78 (224)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh--ccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCcc
Confidence 378899999888888898888888 899 9999999999987654455666789999999999999999998333489
Q ss_pred cCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcC
Q 005183 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRH 577 (710)
Q Consensus 498 l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h 577 (710)
|++||+|++|+|+.|+||++|+||||++|+|+++|+++|+.++++++++++.+++.|+++.+|++++++.+.+.|++|.|
T Consensus 79 l~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~h 158 (224)
T cd01085 79 ISPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGH 158 (224)
T ss_pred cCCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999888633999999999999999999999999
Q ss_pred ccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCC
Q 005183 578 GTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGT 639 (710)
Q Consensus 578 ~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~ 639 (710)
++|||||.++++||.|..+ +.++++.+|++||||++||++|.+|.+|+|+||+|+||++++
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt~~G~ 219 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEAET 219 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEeeCCc
Confidence 9999999656889999744 223477899999999999999999999999999999999954
No 16
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=7e-41 Score=348.92 Aligned_cols=224 Identities=22% Similarity=0.160 Sum_probs=200.5
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCC
Q 005183 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 482 (710)
Q Consensus 408 ~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~-----~~sf~~iv~sG~n 482 (710)
++++|||++||+.||+|+++++.++.++++.+ ++|+||.|+++.+..... ..|.. ..+|++++++|.|
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~n 78 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAV------EPGMTTKELDRIAEKRLE-EHGAIPSPEGYYGFPGSTCISVN 78 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhc------cCCCCHHHHHHHHHHHHH-HCCCEeCcccCCCCCcceEecCC
Confidence 35689999999999999999999999887766 999999999999887654 34443 2457778888999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005183 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (710)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~ 562 (710)
...+|+.|++ +.|++||+|++|+|+.|.||++|++||+++|+|+++++++|+.+++++.+++++++| |+++++|++
T Consensus 79 ~~~~h~~p~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~ 154 (255)
T PRK12896 79 EEVAHGIPGP---RVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKA-GRPLNDIGR 154 (255)
T ss_pred CeeEecCCCC---ccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9999999876 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCcccc--cCCCCccccCCCEEEECceee-----------------ecC
Q 005183 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYY-----------------EDH 622 (710)
Q Consensus 563 ~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~--~~~~~~~L~~GMV~siEPgiy-----------------~~g 622 (710)
++++.+.+.|+. +.|.+||||| +.+||.|..+.. .++++.+|++||||++||++| .+|
T Consensus 155 ~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~ 232 (255)
T PRK12896 155 AIEDFAKKNGYSVVRDLTGHGVG--RSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDK 232 (255)
T ss_pred HHHHHHHHcCCEeccCcccCCcC--cccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCC
Confidence 999999999994 6789999999 999999964532 244678999999999999998 467
Q ss_pred cceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 623 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 623 ~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
.+|+|+||||+||++ |+|+||.
T Consensus 233 ~~~~~~edtv~vt~~------------G~e~Lt~ 254 (255)
T PRK12896 233 SLSAQFEHTVVVTRD------------GPEILTD 254 (255)
T ss_pred CeEEEEEEEEEEcCC------------cceecCC
Confidence 889999999999999 9999984
No 17
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=6.2e-41 Score=343.02 Aligned_cols=214 Identities=20% Similarity=0.070 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCC------ceeEeeCCCCccccccCC
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSF------DTISGSGANGAIIHYKPE 491 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf------~~iv~sG~n~a~~h~~p~ 491 (710)
|+.||+|+++++.++.++++.+ ++|+||.|+++.+.+...+ .|....++ .+++++|+|++.+|+.|+
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i------~pG~tE~ei~a~~~~~~~~-~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~ 73 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAI------REGVPEYEVALAGTQAMVR-EIAKTFPEVELMDTWTWFQSGINTDGAHNPVT 73 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHH-cCCccCCcccccCcceEEEeeccccccCCCCC
Confidence 6789999999999999888777 9999999999998766543 44333222 368999999999999887
Q ss_pred CCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc
Q 005183 492 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 571 (710)
Q Consensus 492 ~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~ 571 (710)
+ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+++.+++.++++++|| |+++.+|++++++.+.+.
T Consensus 74 ~---r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rp-G~~~~~v~~a~~~~~~~~ 149 (228)
T cd01090 74 N---RKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKP-GARCKDIAAELNEMYREH 149 (228)
T ss_pred C---cccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 6 899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CC--CCcCccccccccCCccccCCCcc--cccCCCCccccCCCEEEECceeeec----CcceEEEEEeEEEeecCCCCCC
Q 005183 572 GL--DYRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----HAFGIRIENLLYVKEVGTPNRF 643 (710)
Q Consensus 572 G~--~~~h~~GHGIG~~l~vhE~P~~i--~~~~~~~~~L~~GMV~siEPgiy~~----g~~GiriEd~v~Vte~~~~~~~ 643 (710)
|+ .+.|++||||| +.+||.|... ....+++.+|+|||||++||++|.+ |.+|+|+||+|+||++
T Consensus 150 G~~~~~~~~~GHgiG--l~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~~------ 221 (228)
T cd01090 150 DLLRYRTFGYGHSFG--VLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINEN------ 221 (228)
T ss_pred CCCcccccccCcccc--cccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECCC------
Confidence 98 36899999999 9999987422 2223467899999999999999984 7899999999999999
Q ss_pred CCcccccceeccc
Q 005183 644 GGVSYLGFEKLTF 656 (710)
Q Consensus 644 ~~~~~lg~E~LT~ 656 (710)
|+|+||.
T Consensus 222 ------G~e~Lt~ 228 (228)
T cd01090 222 ------GAENITG 228 (228)
T ss_pred ------ccccCcC
Confidence 9999983
No 18
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-41 Score=346.43 Aligned_cols=376 Identities=21% Similarity=0.270 Sum_probs=273.6
Q ss_pred CCCCCCCCcccccccc----ccchhHHHHHHHHHHHHHHcCCCEEEEccc----------------chhhhhcCCCCCCC
Q 005183 231 SRPKPPNKPIRVHALK----YAGLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDV 290 (710)
Q Consensus 231 ~rp~~p~~~i~~~~~~----~ag~~~~~Kl~~lr~~L~e~glDallis~~----------------dnIaYLtg~rg~di 290 (710)
.+|.+..+|-...|-+ .+..||..|..+|.+.|.++. .+|+++. .|+.||||+.-.+
T Consensus 42 GQpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~- 118 (488)
T KOG2414|consen 42 GQPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPANA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPD- 118 (488)
T ss_pred CCCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCccc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCC-
Confidence 4566666776665544 567899999999999998764 3333321 2455555554433
Q ss_pred CCCceeEEEEEEe--CC---ceEEEEeCCCCCHHHHhhhhcCCe----------EEeecccHHHHHHHHHhcCCEEEEeC
Q 005183 291 PHSPVMYAYLIVE--MD---RAKLFVDDSKVTPDVMDHLKNAGV----------ELRPYNSILSEIKSLAAQGAQLWLDP 355 (710)
Q Consensus 291 ~~~Pv~~a~liV~--~~---~~~Lfvd~~k~~~~~~~~l~~~~V----------~i~~y~~i~~~l~~l~~~~~~i~ld~ 355 (710)
+.+++. +. ...+|++...-..+..+... .|+ +-.+-+++...|.+......++|.|.
T Consensus 119 -------~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~r-tG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~ 190 (488)
T KOG2414|consen 119 -------AVLLLLKGDERSVAYDLFMPPKDPTAELWEGPR-TGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDK 190 (488)
T ss_pred -------eeEEEeecccccceeeEecCCCCccHHhhcCcc-ccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhh
Confidence 445553 22 24577764433333332221 111 11222344445554443345667665
Q ss_pred CCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHH
Q 005183 356 SSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQF 435 (710)
Q Consensus 356 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~ 435 (710)
.+.. ..+.++... . +..++. -+-++..+...+..+|.||||+|++.||+|+.++++++.+.
T Consensus 191 ~ss~--a~s~~~~~~-d-----l~~~~~-----------~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~ 251 (488)
T KOG2414|consen 191 ASSK--ASSALKNMQ-D-----LLGFQS-----------KSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSET 251 (488)
T ss_pred ccch--hhhHHHHHH-h-----hhhhcc-----------cCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHH
Confidence 4433 111111110 0 000111 11246777889999999999999999999999999987654
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCe
Q 005183 436 WVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDG 515 (710)
Q Consensus 436 ~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy 515 (710)
+- .+++...|..+.+.++.-. ...|+...+|+|+|+.|.|+..+||.-++ ..+.+||+|++|.||.+.||
T Consensus 252 m~------~sr~~~~E~~l~a~~eye~-r~rGad~~AYpPVVAgG~na~tIHY~~Nn---q~l~d~emVLvDaGcelgGY 321 (488)
T KOG2414|consen 252 MF------GSRDFHNEAALSALLEYEC-RRRGADRLAYPPVVAGGKNANTIHYVRNN---QLLKDDEMVLVDAGCELGGY 321 (488)
T ss_pred Hh------hccCCcchhhHhhhhhhhe-eecCccccccCCeeecCcccceEEEeecc---cccCCCcEEEEecCcccCce
Confidence 42 3477899999999998533 35788889999999999999999999766 88999999999999999999
Q ss_pred EeeeEeeeeC-CCCCHHHHHHHHHHHHHHHHHHHccCC-CCCChHHHHHHHHH----HHHHcCC-------------CCc
Q 005183 516 TTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFP-QSTPGFVLDAFARS----SLWKIGL-------------DYR 576 (710)
Q Consensus 516 ~tDitRT~~~-G~pt~e~~~~y~~vl~a~~~~~~~i~P-~G~~~~~v~~~ar~----~l~~~G~-------------~~~ 576 (710)
++|+||||.+ |+.|+-|+++|+++++.|..+++..+| .|++..+|+..... .|++.|. .++
T Consensus 322 vSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcP 401 (488)
T KOG2414|consen 322 VSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCP 401 (488)
T ss_pred EccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCC
Confidence 9999999998 999999999999999999999999987 68999999876554 4555565 268
Q ss_pred CccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcc---------eEEEEEeEEEeecCCCCCCCCcc
Q 005183 577 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAF---------GIRIENLLYVKEVGTPNRFGGVS 647 (710)
Q Consensus 577 h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~---------GiriEd~v~Vte~~~~~~~~~~~ 647 (710)
|+.||-+| |+||+-|. ++ .+.+|+||||||||||+|+|..+ ||||||.|+|+++
T Consensus 402 HhVgHyLG--mDVHD~p~-v~----r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~ed---------- 464 (488)
T KOG2414|consen 402 HHVGHYLG--MDVHDCPT-VS----RDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGED---------- 464 (488)
T ss_pred cccchhcC--cccccCCC-CC----CCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccC----------
Confidence 99999999 99999997 43 56789999999999999997543 9999999999999
Q ss_pred cccceecc-cCCccccccc
Q 005183 648 YLGFEKLT-FVPIQTKLVD 665 (710)
Q Consensus 648 ~lg~E~LT-~~P~~~~lI~ 665 (710)
|.|+|| .+|+|.+.|.
T Consensus 465 --g~evLT~a~pKei~~ie 481 (488)
T KOG2414|consen 465 --GPEVLTAACPKEIIEIE 481 (488)
T ss_pred --CceeehhcccCCHHHHH
Confidence 889999 5998776665
No 19
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=7.9e-41 Score=346.08 Aligned_cols=212 Identities=29% Similarity=0.314 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~ 497 (710)
|+.||+|+++++.++.++.+.+ ++|+||.|+++.++....+ .|.. .+|++++++|+|++.+|+.|++ ++
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~~-~G~~-~~~~~~v~~g~~~~~~H~~~~~---~~ 69 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKAS------RPGMSEYELEAEFEYEFRS-RGAR-LAYSYIVAAGSNAAILHYVHND---QP 69 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHHH-cCCC-cCCCCeEEECCCccccCCCcCC---Cc
Confidence 6899999999999999888776 9999999999999876544 4554 6789999999999999999876 89
Q ss_pred cCCCCeEEEecceeeCCeEeeeEeeeeC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcC----
Q 005183 498 VDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIG---- 572 (710)
Q Consensus 498 l~~gd~vliD~g~~y~gy~tDitRT~~~-G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G---- 572 (710)
|++||+|++|+|++|+||++|++|||++ |+|+++++++|+++++++.+++++++| |+++++|++++++++++.|
T Consensus 70 l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~~v~~a~~~~~~~~~~~~g 148 (243)
T cd01087 70 LKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKP-GVSYEDIHLLAHRVLAEGLKELG 148 (243)
T ss_pred CCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999 689999999999999999999999999 9999999999999997653
Q ss_pred ----------------CCCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecC----------cceE
Q 005183 573 ----------------LDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH----------AFGI 626 (710)
Q Consensus 573 ----------------~~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g----------~~Gi 626 (710)
-.+.|++||||| +++||.|. +...++++.+|++||||++||++|.++ .+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~h~~GhgiG--l~~~e~p~-~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~ 225 (243)
T cd01087 149 ILKGDVDEIVESGAYAKFFPHGLGHYLG--LDVHDVGG-YLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGI 225 (243)
T ss_pred cccCchHhhhhhhhhhhhcCCCCccccC--cccccCcc-ccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEE
Confidence 146899999999 99999996 311245789999999999999999997 7899
Q ss_pred EEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 627 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 627 riEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
|+||+|+||++ |+|.||.
T Consensus 226 ~ied~v~Vt~~------------G~e~Lt~ 243 (243)
T cd01087 226 RIEDDVLVTED------------GPENLTR 243 (243)
T ss_pred EeeeEEEEcCC------------cceeCcC
Confidence 99999999999 9999984
No 20
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=5e-41 Score=344.54 Aligned_cols=244 Identities=27% Similarity=0.365 Sum_probs=210.2
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCC
Q 005183 404 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANG 483 (710)
Q Consensus 404 ~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~ 483 (710)
+.+.++|+||++.||+.||.|+++++.|+.++++.+ ++|+.|+++...++......+|....+|.+|+++|+|+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~------~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG~ns 250 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAV------RPGMKEYQLESLFLHHSYSYGGCRHLSYTCICASGDNS 250 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhC------CchHhHHhHHHHHHHhhhccCCccccccceeeecCCCc
Confidence 457889999999999999999999999999999988 99999999999998765566777889999999999999
Q ss_pred cccccc-CCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHH
Q 005183 484 AIIHYK-PEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLD 561 (710)
Q Consensus 484 a~~h~~-p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~-G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~ 561 (710)
++.||. +..++++.|+.||+.++|+|+.|.+|.+|||++|.. |+.|++|+.+|++|+.++.+++++++| |+...|++
T Consensus 251 ~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~Kp-Gv~W~Dmh 329 (492)
T KOG2737|consen 251 AVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKP-GVWWVDMH 329 (492)
T ss_pred ceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCC-CCccccHH
Confidence 999992 222234999999999999999999999999999998 899999999999999999999999999 99999999
Q ss_pred HHHHHHH----HHcCC----------------CCcCccccccccCCccccCCCcc-cc-cC---C-----CCccccCCCE
Q 005183 562 AFARSSL----WKIGL----------------DYRHGTGHGVGAALNVHEGPQSI-SF-RY---G-----NMTPLVEGMI 611 (710)
Q Consensus 562 ~~ar~~l----~~~G~----------------~~~h~~GHGIG~~l~vhE~P~~i-~~-~~---~-----~~~~L~~GMV 611 (710)
..+..++ .+.|. .++||+||-+| |++|+--... ++ +| + ....|++|||
T Consensus 330 ~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lG--lDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~Mv 407 (492)
T KOG2737|consen 330 KLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMV 407 (492)
T ss_pred HHHHHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccc--ccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcE
Confidence 9887654 44443 47999999999 9999832111 10 11 1 3568999999
Q ss_pred EEECceeeec--------------------------CcceEEEEEeEEEeecCCCCCCCCcccccceecccCCccccccc
Q 005183 612 VSNEPGYYED--------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVD 665 (710)
Q Consensus 612 ~siEPgiy~~--------------------------g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~lI~ 665 (710)
+++|||+|+- +.+||||||.|+||++ |+|+||.+|++.+.|+
T Consensus 408 iTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~------------G~enlt~vprtveeIE 475 (492)
T KOG2737|consen 408 ITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKS------------GIENLTCVPRTVEEIE 475 (492)
T ss_pred EEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecc------------ccccccCCCCCHHHHH
Confidence 9999999961 5689999999999999 9999999998877776
Q ss_pred ccc
Q 005183 666 LSL 668 (710)
Q Consensus 666 ~~l 668 (710)
.-|
T Consensus 476 a~m 478 (492)
T KOG2737|consen 476 ACM 478 (492)
T ss_pred HHH
Confidence 543
No 21
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.7e-40 Score=359.79 Aligned_cols=237 Identities=17% Similarity=0.189 Sum_probs=207.9
Q ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCC----CCCCceeEee
Q 005183 404 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL----DTSFDTISGS 479 (710)
Q Consensus 404 ~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~----~~sf~~iv~s 479 (710)
..+...|.|||++||+.||+|++++..++..+.+.+ ++|+||.||++.+++...+.+++. ...|+.++++
T Consensus 129 ~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i------rpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svct 202 (396)
T PLN03158 129 SDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI------KPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCT 202 (396)
T ss_pred cccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeee
Confidence 345678999999999999999999999999888776 999999999999988765544332 1468888999
Q ss_pred CCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHH
Q 005183 480 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (710)
Q Consensus 480 G~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~ 559 (710)
|.|..++|+.|+. ++|++||+|.+|+|+.|+||++|++|||++|+++++++++|+++.+++.+++++++| |++++|
T Consensus 203 s~N~~i~Hgip~~---r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkP-Gv~~~d 278 (396)
T PLN03158 203 SVNEVICHGIPDA---RKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKP-GVRYRE 278 (396)
T ss_pred cccccccCCCCCC---ccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCHHH
Confidence 9999999999976 899999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHcCCC-CcCccccccccCCccccCCCcccccC-CCCccccCCCEEEECceeee-----------------
Q 005183 560 LDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE----------------- 620 (710)
Q Consensus 560 v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~----------------- 620 (710)
|+.++++++.+.|+. +.|.+||||| +.+||.|.+..+.. ....+|+|||||+|||++|.
T Consensus 279 I~~~i~~~~~~~G~~~v~~~~GHGIG--~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~ 356 (396)
T PLN03158 279 VGEVINRHATMSGLSVVKSYCGHGIG--ELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTA 356 (396)
T ss_pred HHHHHHHHHHHcCCCccCCccCCccc--cccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEec
Confidence 999999999999996 6788999999 99999997432221 13478999999999999985
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceeccc-CCcccccc
Q 005183 621 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTKLV 664 (710)
Q Consensus 621 ~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~-~P~~~~lI 664 (710)
+|.+|+|+||+|+||++ |+|+||. .|....++
T Consensus 357 dG~~~aq~E~tvlVTe~------------G~EiLT~~~~~~~~~~ 389 (396)
T PLN03158 357 DGKRSAQFEHTLLVTET------------GVEVLTARLPSSPDVF 389 (396)
T ss_pred CCceeeEeeeEEEEeCC------------cceECCCCCCCCcccc
Confidence 35567899999999999 9999995 77666544
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=2.9e-38 Score=318.66 Aligned_cols=204 Identities=37% Similarity=0.489 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~ 497 (710)
|+.||+|+++++.++..+.+.+ ++|+||.|+++.++.... ..|..+.+|++++++|+|+..+|+.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~~~~~~~~~v~~g~~~~~~h~~~~~---~~ 70 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFI------KPGMTEREVAAELEYFMR-KLGAEGPSFDTIVASGPNSALPHGVPSD---RK 70 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCCCCCCCCcEEEECccccccCCCCCC---cC
Confidence 6799999999999998877666 899999999999987654 4577778999999999999999999876 88
Q ss_pred cCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CC
Q 005183 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 575 (710)
Q Consensus 498 l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~--~~ 575 (710)
+++||++.+|+|++|+||++|++||+++|+|+++++++|+.+.+++.+++++++| |++++||++++++.+++.|+ ++
T Consensus 71 l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~g~~~~~ 149 (208)
T cd01092 71 IEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKP-GVTAKEVDKAARDVIEEAGYGEYF 149 (208)
T ss_pred cCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 58
Q ss_pred cCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeec
Q 005183 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (710)
Q Consensus 576 ~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~ 637 (710)
.|++||||| +..||.|. +. ++++.+|++||||++||++|.++.+|+|+||+|+||++
T Consensus 150 ~~~~Gh~iG--~~~~e~p~-i~--~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 206 (208)
T cd01092 150 IHRTGHGVG--LEVHEAPY-IS--PGSDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVTED 206 (208)
T ss_pred CCCCccccC--cccCcCCC-cC--CCCCCCcCCCCEEEECCeEEecCCCEEEeeeEEEECCC
Confidence 999999999 99999997 54 34789999999999999999999999999999999998
No 23
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.7e-38 Score=326.14 Aligned_cols=214 Identities=23% Similarity=0.233 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCCCccccccCCC
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAIIHYKPEP 492 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~n~a~~h~~p~~ 492 (710)
|+.||+|++++..++..+++.+ ++|+||.|+++.+.+...+ .|... .+|+..+.+|.|++.+|+.|++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~------~pG~tE~ev~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 73 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAI------KPGVTTKELDQIAHEFIEE-HGAYPAPLGYYGFPKSICTSVNEVVCHGIPDD 73 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCCcccccCCCCCcceecCCCCceeCCCCCC
Confidence 6889999999999999887766 9999999999999876543 44422 3466778899999999999876
Q ss_pred CCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcC
Q 005183 493 GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIG 572 (710)
Q Consensus 493 ~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G 572 (710)
++|++||+|++|+|+.|+||++|++||+++|+|+++++++|+.+++++.+++++++| |+++++|++++++.+.+.|
T Consensus 74 ---~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~G 149 (238)
T cd01086 74 ---RVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKP-GNRIGDIGHAIEKYAEKNG 149 (238)
T ss_pred ---cccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CC-CcCccccccccCCccccCCCccc-ccCCCCccccCCCEEEECceeee-----------------cCcceEEEEEeEE
Q 005183 573 LD-YRHGTGHGVGAALNVHEGPQSIS-FRYGNMTPLVEGMIVSNEPGYYE-----------------DHAFGIRIENLLY 633 (710)
Q Consensus 573 ~~-~~h~~GHGIG~~l~vhE~P~~i~-~~~~~~~~L~~GMV~siEPgiy~-----------------~g~~GiriEd~v~ 633 (710)
+. +.|.+||||| +.+||.|..+. ..++++.+|++||||++||++|. +|.+|+|+||+|+
T Consensus 150 ~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~ 227 (238)
T cd01086 150 YSVVREFGGHGIG--RKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVL 227 (238)
T ss_pred cceecCccccCCC--CccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEE
Confidence 95 5788999999 99999997441 22457899999999999999996 5778999999999
Q ss_pred EeecCCCCCCCCcccccceeccc
Q 005183 634 VKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 634 Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
||++ |+|.||.
T Consensus 228 Vte~------------G~e~Lt~ 238 (238)
T cd01086 228 ITED------------GPEILTL 238 (238)
T ss_pred EcCC------------cceeCCC
Confidence 9999 9999984
No 24
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=3.7e-38 Score=324.76 Aligned_cols=217 Identities=19% Similarity=0.218 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCC---------CCCCceeEeeCCCC-ccc
Q 005183 418 LEGMLNSHLRDAAALAQF-WVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL---------DTSFDTISGSGANG-AII 486 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~-~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~---------~~sf~~iv~sG~n~-a~~ 486 (710)
|+.+|+|+.++..+|..+ ...|++.|+....+|+.+++..++.... ..+.. +.+|++|+++|+|+ +++
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~-~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIE-DKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHh-CchhhhcCCCHHHcCcccCCeEeECcCcccCC
Confidence 468999999999999755 4577777843334999999999998753 33433 67999999999999 899
Q ss_pred cccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHH
Q 005183 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 566 (710)
Q Consensus 487 h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~ 566 (710)
|+.+++ +.+..|++|++|+|+.|+||++|+||||++| |+++|+++|+.+++++.+++++++| |+++++|+.++++
T Consensus 80 h~~~s~---~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkp-G~~~~dv~~~a~~ 154 (243)
T cd01091 80 SSSSSD---KLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKTLD 154 (243)
T ss_pred CCCCCc---cccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHH
Confidence 998876 8899999999999999999999999999998 7999999999999999999999999 9999999999999
Q ss_pred HHHHcCC----CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceee-ecC---------cceEEEEEeE
Q 005183 567 SLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY-EDH---------AFGIRIENLL 632 (710)
Q Consensus 567 ~l~~~G~----~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy-~~g---------~~GiriEd~v 632 (710)
++.+.|. .+.|++||||| +++||.|..++ ++++.+|++||||++|||+| .++ .||+||||||
T Consensus 155 ~i~~~~~~~~~~~~~~~GHgiG--le~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV 230 (243)
T cd01091 155 YIKKKKPELEPNFTKNLGFGIG--LEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTI 230 (243)
T ss_pred HHHHhChhHHHhCcCCcccccC--cccccCccccC--CCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEE
Confidence 9999873 57899999999 99999886454 34778999999999999999 443 6899999999
Q ss_pred EEeecCCCCCCCCcccccc-eeccc
Q 005183 633 YVKEVGTPNRFGGVSYLGF-EKLTF 656 (710)
Q Consensus 633 ~Vte~~~~~~~~~~~~lg~-E~LT~ 656 (710)
+||++ |+ |+||.
T Consensus 231 ~Vt~~------------G~~~~LT~ 243 (243)
T cd01091 231 LVTED------------EPAIVLTN 243 (243)
T ss_pred EEcCC------------CCceecCC
Confidence 99999 88 89883
No 25
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=8.6e-37 Score=308.02 Aligned_cols=203 Identities=31% Similarity=0.460 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCccc
Q 005183 419 EGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVV 498 (710)
Q Consensus 419 e~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l 498 (710)
|.||+|+++++.++.++++.+ ++|+||.|+++.+.+.+....|..+.+|++++++|+|+.++|+.|++ +.|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~---~~l 71 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEAL------RPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTD---RRL 71 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------STTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCS---SBE
T ss_pred CHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccc---eee
Confidence 689999999999999998887 99999999999999874455677788999999999999999998865 899
Q ss_pred CCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CCc
Q 005183 499 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYR 576 (710)
Q Consensus 499 ~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~--~~~ 576 (710)
++||+|.+|+|++|.||++|++||+++| |+++|+++|+.+++++.+++++++| |+++.||++++++.+.+.|+ .+.
T Consensus 72 ~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~~ 149 (207)
T PF00557_consen 72 QEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRP-GVTGSDVYEAVREVLEEYGLEEPYP 149 (207)
T ss_dssp STTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBHHHHHHHHHHHHHHTTEGEEBT
T ss_pred ecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhccc-ccccchhhHHHHHHHHhhcccceee
Confidence 9999999999999999999999999999 9999999999999999999999999 99999999999999999998 689
Q ss_pred CccccccccCCccccC-CCcccccCCCCccccCCCEEEECceee-ecCcceEEEEEeEEEee
Q 005183 577 HGTGHGVGAALNVHEG-PQSISFRYGNMTPLVEGMIVSNEPGYY-EDHAFGIRIENLLYVKE 636 (710)
Q Consensus 577 h~~GHGIG~~l~vhE~-P~~i~~~~~~~~~L~~GMV~siEPgiy-~~g~~GiriEd~v~Vte 636 (710)
|.+||||| +.+||. |. +. +++++.+|++||||++||+++ .++++|+++||+|+|||
T Consensus 150 ~~~GH~iG--~~~~~~~P~-i~-~~~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 150 HGLGHGIG--LEFHEPGPN-IA-RPGDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLVTE 207 (207)
T ss_dssp SSSEEEES--SSSSEEEEE-ES-STTTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEEES
T ss_pred eccccccc--cccccccee-ee-cccccceecCCCceeEeeeEEccCCCcEEEEEEEEEECc
Confidence 99999999 999997 97 43 134889999999999999999 67999999999999996
No 26
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1e-34 Score=290.76 Aligned_cols=203 Identities=33% Similarity=0.460 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~ 497 (710)
|+.||+|+++++.++..+++.+ ++|+||.|+++.+.+... ..|. +.++++++++|+|+..+|+.|++ +.
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~-~~~~~~~v~~g~~~~~~h~~~~~---~~ 69 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAI------RPGVTEAEVAAAIEQALR-AAGG-YPAGPTIVGSGARTALPHYRPDD---RR 69 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCC-CCCCCcEEEECccccCcCCCCCC---CC
Confidence 5789999999999999888776 999999999999987654 3454 67888999999999999999875 89
Q ss_pred cCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC--CC
Q 005183 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 575 (710)
Q Consensus 498 l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~--~~ 575 (710)
++.||++++|+|++|.||++|++||+++|+|+++++++|+.+.+++.++++.++| |+++.+|+.++++.+++.|+ ++
T Consensus 70 i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~~~ei~~~~~~~~~~~g~~~~~ 148 (207)
T cd01066 70 LQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNF 148 (207)
T ss_pred cCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 58
Q ss_pred cCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeec
Q 005183 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (710)
Q Consensus 576 ~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~ 637 (710)
.|++||||| +..||.|. +. +.++.+|++||||++||++|.++.+|+++||+|+||++
T Consensus 149 ~~~~Gh~iG--~~~~e~~~-~~--~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 205 (207)
T cd01066 149 GHRTGHGIG--LEIHEPPV-LK--AGDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTED 205 (207)
T ss_pred CCCCccccC--cccCCCCC-cC--CCCCCCcCCCCEEEECCEEEECCCcEEEeeeEEEEeCC
Confidence 899999999 99999996 43 34778999999999999999998899999999999998
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=1.8e-34 Score=295.71 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh---------hCCCCCCCCceeEeeCCCCccccc
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTISGSGANGAIIHY 488 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~---------~~g~~~~sf~~iv~sG~n~a~~h~ 488 (710)
++.||+|+++++.++..+++.+ ++|+||.|++...+..... ..|..+.+|+++++ .|++.+||
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i------~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~ 72 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLC------VPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHF 72 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecC
Confidence 3689999999999999888777 9999999998766554332 14566788988887 48889999
Q ss_pred cCCC-CCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCH-----HHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005183 489 KPEP-GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-----REKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (710)
Q Consensus 489 ~p~~-~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~-----e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~ 562 (710)
.|.+ .++++|++||+|++|+|+.|+||++|+||||++|+|++ +++++|+++++++.+++++++| |++++||+.
T Consensus 73 ~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kp-G~~~~dv~~ 151 (228)
T cd01089 73 SPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRP-GNQNSDITE 151 (228)
T ss_pred CCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHH
Confidence 9753 24589999999999999999999999999999999875 8999999999999999999999 999999999
Q ss_pred HHHHHHHHcCC-----CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeec
Q 005183 563 FARSSLWKIGL-----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (710)
Q Consensus 563 ~ar~~l~~~G~-----~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~ 637 (710)
++++++.+.|+ .+.|++||| +..++++.. -..+|++||||++||++|.+|.+|+++||||+||++
T Consensus 152 a~~~~~~~~G~~~~~~~~~h~~g~~----~~~~~~~~~------~~~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~vt~~ 221 (228)
T cd01089 152 AIQKVIVDYGCTPVEGVLSHQLKRV----VSSGEGKAK------LVECVKHGLLFPYPVLYEKEGEVVAQFKLTVLLTPN 221 (228)
T ss_pred HHHHHHHHcCCEEecCccccCcCce----EecCCCCcc------chhhccCCcccccceeEccCCCeEEEEEEEEEEcCC
Confidence 99999999996 245666664 446666631 257899999999999999999999999999999999
Q ss_pred CCCCCCCCcccccceeccc
Q 005183 638 GTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 638 ~~~~~~~~~~~lg~E~LT~ 656 (710)
|+|.||.
T Consensus 222 ------------G~e~lt~ 228 (228)
T cd01089 222 ------------GVTVLTG 228 (228)
T ss_pred ------------CCeeCCC
Confidence 9999983
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.3e-30 Score=263.16 Aligned_cols=222 Identities=24% Similarity=0.277 Sum_probs=190.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh------hCCCCCCCCceeEeeCCCCcc
Q 005183 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK------QSGFLDTSFDTISGSGANGAI 485 (710)
Q Consensus 412 vKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~------~~g~~~~sf~~iv~sG~n~a~ 485 (710)
+|+++||+.||+|+++...++..+...+ +||+|-.||....+++... ..|+.+..| -++..-|-..
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v------~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~--~~ciSvNe~v 76 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLV------KPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPF--PTCISVNEVV 76 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCCHHHHHHHHHHHHHHcCceehhccCcCCCc--ceEeehhhee
Confidence 8999999999999999999887776654 9999999999999988654 244445344 4455577788
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCC-HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHH
Q 005183 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (710)
Q Consensus 486 ~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt-~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~a 564 (710)
+||.|+ ..+.|++||+|.||+|+.++||.+|.++|+.+|+.+ +..+++.+++.++..++++.++| |++.++|-.++
T Consensus 77 ~HgiP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkp-G~~l~~Ig~aI 153 (255)
T COG0024 77 AHGIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKP-GARLGDIGRAI 153 (255)
T ss_pred eecCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHH
Confidence 999998 458999999999999999999999999999999755 46777999999999999999999 99999999999
Q ss_pred HHHHHHcCCC-CcCccccccccCCccccCCCcccccC-CCCccccCCCEEEECceeee------------------cCcc
Q 005183 565 RSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE------------------DHAF 624 (710)
Q Consensus 565 r~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~-~~~~~L~~GMV~siEPgiy~------------------~g~~ 624 (710)
.+++...|+. ....+||||| ...||.|+..++.. +...+|+|||||+|||.+-. ++..
T Consensus 154 q~~~~~~G~~vVr~~~GHgig--~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~ 231 (255)
T COG0024 154 QEYAESRGFSVVRNLTGHGIG--RELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSL 231 (255)
T ss_pred HHHHHHcCCEEeecccCCccC--cccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCE
Confidence 9999999995 5677999999 89999999776532 23579999999999998753 2345
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 005183 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (710)
Q Consensus 625 GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P 658 (710)
..+.|.||+||++ |+|+||..+
T Consensus 232 ~aq~EHTv~Vt~~------------g~eilT~~~ 253 (255)
T COG0024 232 SAQFEHTVIVTED------------GCEILTLRP 253 (255)
T ss_pred EeEEEEEEEEeCC------------CcEEeeCCC
Confidence 6799999999999 999999765
No 29
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.97 E-value=1.1e-28 Score=269.56 Aligned_cols=199 Identities=13% Similarity=0.051 Sum_probs=169.9
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhh---------CCCCCCCCceeEeeC
Q 005183 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---------SGFLDTSFDTISGSG 480 (710)
Q Consensus 410 RavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~---------~g~~~~sf~~iv~sG 480 (710)
-.+|+++||+.||+|++++..++..+.+++ ++|+|+.||++..+++..+. .+..+.+|+++++
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~i------kpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS-- 82 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEAC------SPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS-- 82 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--
Confidence 478999999999999999999998888776 99999999998876654331 3356788998887
Q ss_pred CCCccccccCCCC-CCcccCCCCeEEEecceeeCCeEeeeEeeeeCCC-----CCHHHHHHHHHHHHHHHHHHHccCCCC
Q 005183 481 ANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE-----PTAREKECFTRVLQGHIALDQAIFPQS 554 (710)
Q Consensus 481 ~n~a~~h~~p~~~-~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~-----pt~e~~~~y~~vl~a~~~~~~~i~P~G 554 (710)
.|...+||.|... +++.|+.||+|.||+|++++||++|++||+++|+ ++++++++++++.+|+.+++++++| |
T Consensus 83 vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkP-G 161 (389)
T TIGR00495 83 VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKP-G 161 (389)
T ss_pred cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 6788899999542 2478999999999999999999999999999995 4678999999999999999999999 9
Q ss_pred CChHHHHHHHHHHHHHcCCC-CcCccccccccCCcccc-CCCcccc-cC-----CCCccccCCCEEEECceee
Q 005183 555 TPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHE-GPQSISF-RY-----GNMTPLVEGMIVSNEPGYY 619 (710)
Q Consensus 555 ~~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE-~P~~i~~-~~-----~~~~~L~~GMV~siEPgiy 619 (710)
++.++|+.++++++.++|+. ..+.+||||| ..+|| .|.++.. .. .....|++|||++|||.+-
T Consensus 162 ~~~~dI~~ai~~v~~~~G~~~v~~~~gH~ig--r~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs 232 (389)
T TIGR00495 162 NTNTQVTEAINKVAHSYGCTPVEGMLSHQLK--QHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVS 232 (389)
T ss_pred CcHHHHHHHHHHHHHHcCCeecCCceeeccc--ceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeec
Confidence 99999999999999999995 6778999999 77888 6763322 11 1356899999999999763
No 30
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.97 E-value=6.3e-29 Score=263.18 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCc
Q 005183 417 ELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCS 496 (710)
Q Consensus 417 EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~ 496 (710)
+|+.||+|++++..++..+.+.+ ++|+||.|+++.++....+ .|. +++|+++++.|.+ .+||.|...+++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i------~pG~se~ei~~~~~~~i~~-~g~-~~afp~~vs~n~~--~~H~~p~~~d~~ 70 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLI------KPGAKLLDVAEFVENRIRE-LGA-KPAFPCNISINEV--AAHYTPSPGDER 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHH-cCC-ccCCCCEEeeCCC--ccCCCCCCCCCc
Confidence 58999999999999998887665 9999999999999887654 443 6889998887765 469999754558
Q ss_pred ccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC-CC
Q 005183 497 VVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-DY 575 (710)
Q Consensus 497 ~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~-~~ 575 (710)
.|++||+|.+|+|++|+||++|++||+++| ++++++++++.+|+.+++++++| |++++||++++++.+++.|+ .+
T Consensus 71 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikp-G~~~~dv~~~i~~vi~~~G~~~~ 146 (291)
T PRK08671 71 VFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRP-GVSVGEIGRVIEETIRSYGFKPI 146 (291)
T ss_pred ccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccc
Confidence 899999999999999999999999999999 47899999999999999999999 99999999999999999999 46
Q ss_pred cCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEE
Q 005183 576 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIR 627 (710)
Q Consensus 576 ~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~Gir 627 (710)
.|.+|||||.+ .+||+|.+.....+++.+|++||||++||.+ ..|.+.++
T Consensus 147 ~~~~GHgiG~~-~~he~p~ip~~~~~~~~~le~GmV~aIEp~~-t~G~G~v~ 196 (291)
T PRK08671 147 RNLTGHGLERY-ELHAGPSIPNYDEGGGVKLEEGDVYAIEPFA-TDGEGKVV 196 (291)
T ss_pred CCCcccCcCCC-cccCCCccCccCCCCCceeCCCCEEEEcceE-ECCCCeEe
Confidence 78999999932 7899997444444578899999999999965 56665554
No 31
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.96 E-value=6.9e-29 Score=272.51 Aligned_cols=195 Identities=15% Similarity=0.133 Sum_probs=168.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh---hCCC-CCCCCceeEeeCCCCccc
Q 005183 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSGANGAII 486 (710)
Q Consensus 411 avKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~---~~g~-~~~sf~~iv~sG~n~a~~ 486 (710)
-.++++||+.||+|+.++..++..+...+ ++|+|+.||++.++....+ ..|. .+.+|++++ +.|.+.+
T Consensus 151 ~~~s~~EI~~~R~AaeIa~~vl~~~~~~I------kpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~aa 222 (470)
T PTZ00053 151 EKLSEEQYQDLRRAAEVHRQVRRYAQSVI------KPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCAA 222 (470)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCcccc
Confidence 34799999999999999999888877666 9999999999988864322 2344 468999865 4788889
Q ss_pred cccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHH
Q 005183 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 566 (710)
Q Consensus 487 h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~ 566 (710)
||.|+..++++|+.||+|.||+|++|+||++|++||+++| ++++++++++.+|+.+++++++| |+++++|+.++++
T Consensus 223 H~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kp-Gv~~~dI~~AIqe 298 (470)
T PTZ00053 223 HYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGI-DVRLSDIGAAIQE 298 (470)
T ss_pred CCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHH
Confidence 9999754458899999999999999999999999999998 58899999999999999999999 9999999999999
Q ss_pred HHHHcCCC----------CcCccccccccCC-ccccCCCcccccCCCCccccCCCEEEECceee
Q 005183 567 SLWKIGLD----------YRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 619 (710)
Q Consensus 567 ~l~~~G~~----------~~h~~GHGIG~~l-~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy 619 (710)
++.++|+. +.|.+||||| + .+||+|.......++..+|++||||+|||.+-
T Consensus 299 vies~G~e~~Gk~f~~k~I~nltGHgIG--~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 299 VIESYEVEIKGKTYPIKSIRNLNGHSIG--PYIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred HHHHcCCcccCcccccccccCCcccCCC--CccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 99999972 3799999999 7 79997764444455778999999999999764
No 32
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.96 E-value=1.9e-28 Score=259.66 Aligned_cols=199 Identities=17% Similarity=0.139 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCC
Q 005183 415 SAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGK 494 (710)
Q Consensus 415 ~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~ 494 (710)
-+||+.||+|+++++.++..+.+++ ++|++|.|+++.++....+ .|. ..+|+++++. |...+||.|...+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i------~~G~se~el~~~~e~~~~~-~g~-~~aFp~~vs~--n~~~~H~~p~~~d 71 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRI------VPGVKLLEVAEFVENRIRE-LGA-EPAFPCNISI--NECAAHFTPKAGD 71 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHHH-cCC-CCCCCcceec--CCEeeCCCCCCCc
Confidence 3789999999999999999888776 9999999999999887654 454 3789998774 5667899997545
Q ss_pred CcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC-
Q 005183 495 CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL- 573 (710)
Q Consensus 495 ~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~- 573 (710)
++.|++||+|.+|+|++|+||++|++||+++|+ .++++|+++.+|+.+++++++| |++++||++++++++.+.|+
T Consensus 72 ~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kP-Gv~~~dV~~ai~~vi~~~G~~ 147 (295)
T TIGR00501 72 KTVFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRA-GVRVGEIGKAIQEVIESYGVK 147 (295)
T ss_pred CccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCe
Confidence 578999999999999999999999999999995 3689999999999999999999 99999999999999999999
Q ss_pred CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEE
Q 005183 574 DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIE 629 (710)
Q Consensus 574 ~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriE 629 (710)
.+.|.+|||||. +.+|++|......++++.+|++||||++||. +..|.+.++-+
T Consensus 148 ~i~~~~GHgig~-~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~-~~~G~G~v~~~ 201 (295)
T TIGR00501 148 PISNLTGHSMAP-YRLHGGKSIPNVKERDTTKLEEGDVVAIEPF-ATDGVGYVTDG 201 (295)
T ss_pred eecCCCCcceec-ccccCCCccCeecCCCCCEeCCCCEEEEcee-EECCcCeEecC
Confidence 478999999995 3678886533333446789999999999995 56776655433
No 33
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.6e-28 Score=245.81 Aligned_cols=223 Identities=17% Similarity=0.158 Sum_probs=197.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC----CCCceeEeeCCCCccc
Q 005183 411 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD----TSFDTISGSGANGAII 486 (710)
Q Consensus 411 avKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~----~sf~~iv~sG~n~a~~ 486 (710)
-|.++++|+.||.|++++...+..+...+ +||+|..||....+++..+.+.+-. ..|+-.+++.-|-.+.
T Consensus 115 ~i~~~e~ie~mR~ac~LarevLd~Aa~~v------~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviC 188 (369)
T KOG2738|consen 115 KILDPEGIEGMRKACRLAREVLDYAATLV------RPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVIC 188 (369)
T ss_pred eccCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheee
Confidence 57899999999999999998887766555 9999999999999988766554432 3678888999999999
Q ss_pred cccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHH
Q 005183 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 566 (710)
Q Consensus 487 h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~ 566 (710)
|+.|.. |+|+.||++.||+...++||+.|+.+||++|+.+++.+++.+...++++.+++.++| |++..+|-..+.+
T Consensus 189 HGIPD~---RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kp-Gv~freiG~iI~k 264 (369)
T KOG2738|consen 189 HGIPDS---RPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKP-GVSFREIGNIIQK 264 (369)
T ss_pred cCCCCc---CcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHH
Confidence 999987 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHcCCC-CcCccccccccCCccccCCCcccccCC-CCccccCCCEEEECceeee-----------------cCcceEE
Q 005183 567 SLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYG-NMTPLVEGMIVSNEPGYYE-----------------DHAFGIR 627 (710)
Q Consensus 567 ~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~~-~~~~L~~GMV~siEPgiy~-----------------~g~~Gir 627 (710)
...+.|+. ....+||||| --.|-.|.+..+..+ ...++++||+|+|||.+-. +|.....
T Consensus 265 ha~~~g~sVVr~ycGHGig--~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQ 342 (369)
T KOG2738|consen 265 HATKNGYSVVRSYCGHGIG--RVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQ 342 (369)
T ss_pred HhhhcCceeehhhhccccc--cccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecc
Confidence 99999997 6678999999 668999986555432 4568999999999998854 3456789
Q ss_pred EEEeEEEeecCCCCCCCCcccccceecccC
Q 005183 628 IENLLYVKEVGTPNRFGGVSYLGFEKLTFV 657 (710)
Q Consensus 628 iEd~v~Vte~~~~~~~~~~~~lg~E~LT~~ 657 (710)
.|.|++||++ |+|+||..
T Consensus 343 FEhTlLVT~t------------G~EILT~r 360 (369)
T KOG2738|consen 343 FEHTLLVTET------------GCEILTKR 360 (369)
T ss_pred eeeEEEEecc------------cceehhcc
Confidence 9999999999 99999964
No 34
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.96 E-value=1e-27 Score=253.90 Aligned_cols=195 Identities=18% Similarity=0.149 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcc
Q 005183 418 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 497 (710)
Q Consensus 418 Ie~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~ 497 (710)
++.||+|++++..++.++.+.+ ++|+||.|+++.+++...+ .|. +++|++.+ +.|...+||.|...+++.
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i------~pG~te~ei~~~~~~~i~~-~G~-~~afp~~i--s~n~~~~H~~p~~~d~~~ 70 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLI------KPGMTLLEIAEFVENRIRE-LGA-GPAFPVNL--SINECAAHYTPNAGDDTV 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHH-cCC-CCCCCcee--ccCCEeeCCCCCCCCCcc
Confidence 3689999999999999888766 9999999999999886544 443 67888764 466778899997655689
Q ss_pred cCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-Cc
Q 005183 498 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR 576 (710)
Q Consensus 498 l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~ 576 (710)
|++||+|.+|+|++|+||++|++||+++|+ +++++|+++++|+++++++++| |++++||++++++.+.+.|+. +.
T Consensus 71 l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikP-G~~~~dV~~ai~~~i~~~G~~~~~ 146 (291)
T cd01088 71 LKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGP-DVRLGEIGEAIEEVIESYGFKPIR 146 (291)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCEEee
Confidence 999999999999999999999999999995 7889999999999999999999 999999999999999999994 67
Q ss_pred CccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEE
Q 005183 577 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRI 628 (710)
Q Consensus 577 h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~Giri 628 (710)
|.+|||||. +.+|++|.......+++.+|++||||+|||. +..|.+.++-
T Consensus 147 ~~~GHgig~-~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~-~s~G~G~v~~ 196 (291)
T cd01088 147 NLTGHSIER-YRLHAGKSIPNVKGGEGTRLEEGDVYAIEPF-ATTGKGYVHD 196 (291)
T ss_pred cCCccCccC-ccccCCCccCccCCCCCCEeCCCCEEEEcee-EECCCCeeec
Confidence 899999994 2689987643433446789999999999995 5677776654
No 35
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.93 E-value=1.6e-24 Score=238.68 Aligned_cols=263 Identities=20% Similarity=0.222 Sum_probs=218.2
Q ss_pred CCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCCHHHHHHHHHHHHHhh---CC---
Q 005183 395 GGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQF-WVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---SG--- 467 (710)
Q Consensus 395 ~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~-~~~l~~~i~~~~g~tE~ela~~l~~~~~~~---~g--- 467 (710)
.+.+.+|++..+..+-+||++.||+.+|.|+..+...|.++ ...+.+.++....+|...++..++.+.... .|
T Consensus 120 ~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~ 199 (960)
T KOG1189|consen 120 GGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDP 199 (960)
T ss_pred cCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCc
Confidence 36778999999999999999999999999999999999855 456677787777889999988887654321 12
Q ss_pred -CCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHH
Q 005183 468 -FLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIAL 546 (710)
Q Consensus 468 -~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~ 546 (710)
...+.|++|+.+|.+..+-....++ +..| + ++++.+|++|++||++++||+.+. |+.+|.+.|+.++.+|.++
T Consensus 200 ~~~d~cY~PIiqSGg~ydlk~sa~s~--~~~L--~-~I~cs~G~RynsYCSNv~RT~Lid-pssemq~nY~fLl~aqe~i 273 (960)
T KOG1189|consen 200 DLLDMCYPPIIQSGGKYDLKPSAVSD--DNHL--H-VILCSLGIRYNSYCSNVSRTYLID-PSSEMQENYEFLLAAQEEI 273 (960)
T ss_pred cccccccChhhhcCCccccccccccc--cccc--c-eEEeeccchhhhhhccccceeeec-chHHHHHHHHHHHHHHHHH
Confidence 1346899999999988753222222 2556 4 999999999999999999999997 8999999999999999999
Q ss_pred HHccCCCCCChHHHHHHHHHHHHHcCC----CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeee--
Q 005183 547 DQAIFPQSTPGFVLDAFARSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE-- 620 (710)
Q Consensus 547 ~~~i~P~G~~~~~v~~~ar~~l~~~G~----~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~-- 620 (710)
+..++| |+..++||..+.+++.+.+. ++....|.||| |+..|.-..|+.+ ++.+|++||||.|..|+-.
T Consensus 274 l~~lrp-G~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iG--lEFREssl~inaK--nd~~lk~gmvFni~lGf~nl~ 348 (960)
T KOG1189|consen 274 LKLLRP-GTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIG--LEFRESSLVINAK--NDRVLKKGMVFNISLGFSNLT 348 (960)
T ss_pred HHhhcC-CCchhHHHHHHHHHHHhcCcchhhhhhhhcccccc--eeeeccccccccc--chhhhccCcEEEEeecccccc
Confidence 999999 99999999999999999987 46677899999 9999998777654 8899999999999988753
Q ss_pred ----cCcceEEEEEeEEEeecCCCCCCCCcccccc-eecccCCccccccccccCCHHHHHHHHHH
Q 005183 621 ----DHAFGIRIENLLYVKEVGTPNRFGGVSYLGF-EKLTFVPIQTKLVDLSLLSAAEIDWLNNY 680 (710)
Q Consensus 621 ----~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~-E~LT~~P~~~~lI~~~ll~~~e~~~ln~y 680 (710)
.+.|.+-|.|||+|+++ ++ ++||.++....-+.+..-.++|-+-++.=
T Consensus 349 n~~~~~~yaL~l~DTvlv~e~------------~p~~vLT~~~K~~~dv~~~f~~eeeE~~~~~k 401 (960)
T KOG1189|consen 349 NPESKNSYALLLSDTVLVGED------------PPAEVLTDSAKAVKDVSYFFKDEEEEEELEKK 401 (960)
T ss_pred CcccccchhhhccceeeecCC------------Ccchhhcccchhhcccceeeccchhhhhhhhc
Confidence 34588999999999998 44 99999998888888777665555555443
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.79 E-value=4.2e-18 Score=184.66 Aligned_cols=231 Identities=14% Similarity=0.157 Sum_probs=181.2
Q ss_pred CcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh-----h----CC
Q 005183 397 PAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK-----Q----SG 467 (710)
Q Consensus 397 ~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~-----~----~g 467 (710)
...+|++.-+..+-++|+.+||+.+|.+.+...+.|..+...++..++..-.+|...+...++...-. . .|
T Consensus 155 fN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~ 234 (1001)
T COG5406 155 FNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLG 234 (1001)
T ss_pred cchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccc
Confidence 35678888899999999999999999999999888887777776666544456777777776642110 0 11
Q ss_pred -----CCCCCCceeEeeCCCCccccccCCCCC-CcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHH
Q 005183 468 -----FLDTSFDTISGSGANGAIIHYKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQ 541 (710)
Q Consensus 468 -----~~~~sf~~iv~sG~n~a~~h~~p~~~~-~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~ 541 (710)
-..+.|.||++||....+ .|+.-+ +..+ -||+|++.+|.+|+|||++++||+++. |+.||++-|+.++.
T Consensus 235 ~~~~d~lew~ytpiiqsg~~~Dl---~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~d-p~~e~~~Ny~fl~~ 309 (1001)
T COG5406 235 DIDLDQLEWCYTPIIQSGGSIDL---TPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILTD-PDSEQQKNYEFLYM 309 (1001)
T ss_pred ccchhhhhhhcchhhccCceeec---ccccccCchhh-cCceEEEEeeeeeccccccccceEEeC-CchHhhhhHHHHHH
Confidence 123678899999976543 333211 2445 578999999999999999999999987 89999999999999
Q ss_pred HHHHHHHccCCCCCChHHHHHHHHHHHHHcCC----CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECce
Q 005183 542 GHIALDQAIFPQSTPGFVLDAFARSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPG 617 (710)
Q Consensus 542 a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~----~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPg 617 (710)
++..++..++| |+..++||..+..++.+.|. +|...+|-+|| ++.++....++.. ++.+|+.||+|.|.-|
T Consensus 310 lQk~i~~~~rp-G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~ig--iefR~s~~~~nvk--n~r~lq~g~~fnis~g 384 (1001)
T COG5406 310 LQKYILGLVRP-GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIG--IEFRSSQKPFNVK--NGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHhhcCC-CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcc--ccccccccceecc--CCceeccccEEEEeec
Confidence 99999999999 99999999999999999887 46677899999 8888866544433 7799999999999887
Q ss_pred eee------cCcceEEEEEeEEEeec
Q 005183 618 YYE------DHAFGIRIENLLYVKEV 637 (710)
Q Consensus 618 iy~------~g~~GiriEd~v~Vte~ 637 (710)
+-. ...|..-+-||+-|+-+
T Consensus 385 f~nl~~~~~~Nnyal~l~dt~qi~ls 410 (1001)
T COG5406 385 FGNLINPHPKNNYALLLIDTEQISLS 410 (1001)
T ss_pred ccccCCCCcccchhhhhccceEeecC
Confidence 643 24466777777777665
No 37
>PRK09795 aminopeptidase; Provisional
Probab=99.68 E-value=1.7e-14 Score=158.01 Aligned_cols=109 Identities=19% Similarity=0.328 Sum_probs=91.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHHHHhhcCCcE
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSSSW 162 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e~~~~~ 162 (710)
+||++||++|++ +++||+||+++ .|++|||||+|++|+++|+.++++||||+||.+||+++++. +
T Consensus 2 ~Rl~~l~~~m~~--~~lDa~lI~~~------------~n~~YLTGf~g~~g~llIt~~~~~l~td~ry~~qa~~~~~~-~ 66 (361)
T PRK09795 2 TLLASLRDWLKA--QQLDAVLLSSR------------QNKQPHLGISTGSGYVVISRESAHILVDSRYYADVEARAQG-Y 66 (361)
T ss_pred cHHHHHHHHHHH--CCCCEEEECCc------------cccccccCccCCCeEEEEECCCCEEEcCcchHHHHHhhCCC-c
Confidence 599999999999 99999999998 49999999999999999999999999999999999988864 2
Q ss_pred EEEEcCCCCCCCHHHHHHHhcC--CCCeEEEcCCCCcHHHHHHHHHHH
Q 005183 163 ILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAI 208 (710)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~l~--~~~~vG~d~~~~s~~~~~~L~~~l 208 (710)
++.... +.+.+.++|.+.+. ..++||||+..+++..++.|++.+
T Consensus 67 ~v~~~~--~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l 112 (361)
T PRK09795 67 QLHLLD--ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSEL 112 (361)
T ss_pred eEEEec--CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhc
Confidence 333221 23456678877664 347899999999999999998765
No 38
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.56 E-value=6.1e-15 Score=137.22 Aligned_cols=124 Identities=26% Similarity=0.401 Sum_probs=101.4
Q ss_pred HHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCC---cCCceEEE-EeCCceEEEeC-cccHHHHHhh-
Q 005183 84 KLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGF---TGSAGTAV-VTKDKAALWTD-GRYFLQAEKQ- 157 (710)
Q Consensus 84 Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGF---tGs~g~~v-vt~~~a~L~tD-~RY~~qA~~e- 157 (710)
|+++||+.|++ .|+|++||+++ .|++||||| +++.++++ |+.++++||+| ++|..+++..
T Consensus 1 Rl~rl~~~m~~--~gid~lll~~~------------~ni~YltG~~~~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~ 66 (132)
T PF01321_consen 1 RLERLRAAMAE--AGIDALLLTSP------------ENIRYLTGFRWQPGERPVLLVITADGAVLFVPKGEYERAAEESA 66 (132)
T ss_dssp HHHHHHHHHHH--TT-SEEEEESH------------HHHHHHHS--ST-TSSEEEEEEESSSEEEEEEGGGHHHHHHHHT
T ss_pred CHHHHHHHHHH--CCCCEEEEcCh------------hhceEecCCCcCCCcceEEEEecccCcEEEeccccHHHHHHhhc
Confidence 89999999999 99999999998 699999999 89988888 89988899999 8888888776
Q ss_pred cCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 158 LSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
... ++..... ..+.+.++|++.+...++||+|+..+|+..++.|++.+++. ++++. +++|++++
T Consensus 67 ~~~--~v~~~~~-~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~~~~--~~v~~--~~~i~~~R 130 (132)
T PF01321_consen 67 PDD--EVVEYED-PYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEALPGA--EFVDA--SPLIEELR 130 (132)
T ss_dssp TSS--EEEEEST-HHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHSTTS--EEEEE--HHHHHHHH
T ss_pred CCc--eEEEEec-ccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhCCCC--EEEEc--HHHHHHcC
Confidence 332 3332221 14567899999877779999999999999999999998654 99998 88888875
No 39
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.43 E-value=2.8e-13 Score=125.98 Aligned_cols=128 Identities=23% Similarity=0.378 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEEeec
Q 005183 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRPY 334 (710)
Q Consensus 255 Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l~~~~V~i~~y 334 (710)
|++++|+.|+++|+|++|+++++|++||||++... ...| .+++++.++.+||++..+......+. ....++..|
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~~~~-~~~~---~~l~i~~~~~~l~~~~~~~~~~~~~~--~~~~~v~~~ 74 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFRWQP-GERP---VLLVITADGAVLFVPKGEYERAAEES--APDDEVVEY 74 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS--ST--TSSE---EEEEEESSSEEEEEEGGGHHHHHHHH--TTSSEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCCcCC-Ccce---EEEEecccCcEEEeccccHHHHHHhh--cCCceEEEE
Confidence 89999999999999999999999999999996221 1122 33448888889999966554333333 123455555
Q ss_pred c----cHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCcccccc
Q 005183 335 N----SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 410 (710)
Q Consensus 335 ~----~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lR 410 (710)
. ++.+.|+++...+++||+|.+.+++..++.|++.+ |+.+++++++++..+|
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~i~~~R 130 (132)
T PF01321_consen 75 EDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEAL------------------------PGAEFVDASPLIEELR 130 (132)
T ss_dssp STHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHS------------------------TTSEEEEEHHHHHHHH
T ss_pred ecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhC------------------------CCCEEEEcHHHHHHcC
Confidence 4 45566677665569999999999999999998864 6788999999999999
Q ss_pred cc
Q 005183 411 AV 412 (710)
Q Consensus 411 av 412 (710)
+|
T Consensus 131 ~I 132 (132)
T PF01321_consen 131 MI 132 (132)
T ss_dssp TS
T ss_pred cC
Confidence 86
No 40
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.18 E-value=5.4e-10 Score=113.34 Aligned_cols=181 Identities=18% Similarity=0.193 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH----HhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCC
Q 005183 427 RDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR----SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKK 502 (710)
Q Consensus 427 ~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~----~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd 502 (710)
.++.|+.++...+...+ +||||-.||...++..- .+.+-..+.+||+=++ -|.+-.||+|+.....+|+.+|
T Consensus 90 raAE~HRqvR~yv~s~i--kPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpNaGd~tVLqydD 165 (397)
T KOG2775|consen 90 RAAEAHRQVRKYVQSII--KPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPNAGDKTVLKYDD 165 (397)
T ss_pred HHHHHHHHHHHHHHHhc--cCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCCCCCceeeeecc
Confidence 34456666666665556 99999999999998632 2222234678887655 3555579999987778999999
Q ss_pred eEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--------
Q 005183 503 LFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-------- 574 (710)
Q Consensus 503 ~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-------- 574 (710)
+..||+|.+.+|--.|.+-|+.|.+ ..-.+..+|.+|...+++..-- .++..||-+++++++..+-..
T Consensus 166 V~KiDfGthi~GrIiDsAFTv~F~p---~~d~Ll~AvreaT~tGIkeaGi-DvRlcdiG~aiqEVmeSyEvEi~Gk~~~V 241 (397)
T KOG2775|consen 166 VMKIDFGTHIDGRIIDSAFTVAFNP---KYDPLLAAVREATNTGIKEAGI-DVRLCDIGEAIQEVMESYEVEINGKTYQV 241 (397)
T ss_pred eEEEeccccccCeEeeeeeEEeeCc---cccHHHHHHHHHHhhhhhhcCc-eeeehhhhHHHHHHhhheEEEeCCceecc
Confidence 9999999999999999999999874 4556788888998888887665 689999999999999886541
Q ss_pred --CcCccccccccCCccccCCCcccccCCCCccccCCCEEEECc
Q 005183 575 --YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEP 616 (710)
Q Consensus 575 --~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEP 616 (710)
...-.||+|+.| .+|-+-.....+.+..+.+++|.+++||.
T Consensus 242 KpIrnLnGHSI~~y-rIH~gksVPiVkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 242 KPIRNLNGHSIAQY-RIHGGKSVPIVKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred eeccccCCCcccce-EeecCcccceecCCcceeecCCeeEEEEe
Confidence 234469999975 56766432223345788999999999995
No 41
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.17 E-value=2.9e-09 Score=110.87 Aligned_cols=155 Identities=12% Similarity=0.064 Sum_probs=128.5
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh---------hCCCCCCCCceeEeeC
Q 005183 410 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTISGSG 480 (710)
Q Consensus 410 RavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~---------~~g~~~~sf~~iv~sG 480 (710)
..+-++.-+-.+|.|+.++..++..+.+.+ .+|.+-.||+..-..+..+ ..-..|.+|||.++
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~------~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is-- 84 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELC------QPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS-- 84 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHh------cCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--
Confidence 456778889999999999999998888776 8999999998765443322 23346789999877
Q ss_pred CCCccccccCCCCC-CcccCCCCeEEEecceeeCCeEeeeEeeeeCCCC-----CHHHHHHHHHHHHHHHHHHHccCCCC
Q 005183 481 ANGAIIHYKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEP-----TAREKECFTRVLQGHIALDQAIFPQS 554 (710)
Q Consensus 481 ~n~a~~h~~p~~~~-~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~p-----t~e~~~~y~~vl~a~~~~~~~i~P~G 554 (710)
.|-+.+||.|-..+ +-.|++||+|.||+|++++||.+-++.|+++|.+ +....++..++..|.+++++.++| |
T Consensus 85 vnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkp-g 163 (398)
T KOG2776|consen 85 VNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKP-G 163 (398)
T ss_pred ccceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCC-C
Confidence 56677899996543 6789999999999999999999999999999853 356678888888888999999999 9
Q ss_pred CChHHHHHHHHHHHHHcCC
Q 005183 555 TPGFVLDAFARSSLWKIGL 573 (710)
Q Consensus 555 ~~~~~v~~~ar~~l~~~G~ 573 (710)
.+-.+|-+++.+.+...|+
T Consensus 164 n~n~~vT~~i~k~aas~~c 182 (398)
T KOG2776|consen 164 NTNTQVTRAIVKTAASYGC 182 (398)
T ss_pred CCCchhhHHHHHHHHHhCC
Confidence 9999999988888888776
No 42
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.12 E-value=7.7e-09 Score=114.66 Aligned_cols=132 Identities=15% Similarity=0.219 Sum_probs=93.6
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCc----eEEEEe-CCceEEEeCcccHHH
Q 005183 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVT-KDKAALWTDGRYFLQ 153 (710)
Q Consensus 79 ~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~----g~~vvt-~~~a~L~tD~RY~~q 153 (710)
..+..|+++||+.|++ +++|++||+++ .|++|||||++.. ..+||+ +++++|+++.++..+
T Consensus 9 ~E~~~Rl~rl~~~m~~--~~lDalli~~~------------~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~~~~~~ 74 (391)
T TIGR02993 9 AEYQARLDKTRAAMEA--RGIDLLIVTDP------------SNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRGQDANG 74 (391)
T ss_pred HHHHHHHHHHHHHHHH--cCCCEEEEcCc------------ccceeeccCCCCceEEEEEEEEcCCCceEEEehhhhhhh
Confidence 4577899999999999 99999999998 6999999999864 345555 567889898877777
Q ss_pred HHhhcCCc-EEEEEcC----CCCCCCHHHHHHHhcC----CCCeEEEcCCC--CcHHHHHHHHHHHhhCCCEEEEccCcc
Q 005183 154 AEKQLSSS-WILMRSG----NHGVPTTFEWLNDVLA----PGGRVGIDPFL--FSSDAAEELKEAIAKKNHELVYLYDLN 222 (710)
Q Consensus 154 A~~e~~~~-~~~~~~~----~~~~~~~~~~l~~~l~----~~~~vG~d~~~--~s~~~~~~L~~~l~~~~~~l~~~~~~~ 222 (710)
++.+.... -.+.... ....+++.+++.+.+. ..++||+|... +|+..|+.|++.|+. ++++++ +.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~~--~~~~d~--~~ 150 (391)
T TIGR02993 75 AKRTAFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLPN--ARFVDA--TA 150 (391)
T ss_pred HhheeeccccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCCC--CEEEeh--HH
Confidence 76543110 0011000 0011344555554442 23589999875 899999999998854 589997 88
Q ss_pred hHHHhh
Q 005183 223 LVDVIW 228 (710)
Q Consensus 223 lvd~iw 228 (710)
+++++.
T Consensus 151 ~~~~lR 156 (391)
T TIGR02993 151 LVNWQR 156 (391)
T ss_pred HHHHHH
Confidence 888875
No 43
>PRK14575 putative peptidase; Provisional
Probab=98.87 E-value=7.1e-07 Score=99.50 Aligned_cols=129 Identities=17% Similarity=0.218 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCc---------eEEEEeCC-c-eE-EEeCcc
Q 005183 82 DEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA---------GTAVVTKD-K-AA-LWTDGR 149 (710)
Q Consensus 82 ~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~---------g~~vvt~~-~-a~-L~tD~R 149 (710)
+.-++++|+.|++ +++|++||+++ .|++|||||.+.. +.+||+.+ + ++ |+++..
T Consensus 10 ~~~~~rlr~~m~~--~glD~lvl~~p------------~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~ 75 (406)
T PRK14575 10 NTVSRKLRTIMER--DNIDAVIVTTC------------DNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEF 75 (406)
T ss_pred HHHHHHHHHHHHH--cCCCEEeecCc------------chheeecccccccceecccCCceEEEEEcCCCCCceEEechh
Confidence 4468899999999 99999999999 5999999998753 34677766 3 44 889999
Q ss_pred cHHHHHhhcCC----cEEEEEcCCCCC------------------CCHHHHHHHhc----CCCCeEEEcCCCCcHHHHHH
Q 005183 150 YFLQAEKQLSS----SWILMRSGNHGV------------------PTTFEWLNDVL----APGGRVGIDPFLFSSDAAEE 203 (710)
Q Consensus 150 Y~~qA~~e~~~----~~~~~~~~~~~~------------------~~~~~~l~~~l----~~~~~vG~d~~~~s~~~~~~ 203 (710)
+...++.+... .+.......... +...+.+++.+ ..+++||+|.+.++...++.
T Consensus 76 E~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~ 155 (406)
T PRK14575 76 EAASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRV 155 (406)
T ss_pred hhhhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHH
Confidence 98888865321 111211110001 11112443333 35689999999999999999
Q ss_pred HHHHHhhCCCEEEEccCcchHHHhh
Q 005183 204 LKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 204 L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
|+..++. .+++++ +++++++.
T Consensus 156 l~~~lp~--~~~~d~--~~~l~~lR 176 (406)
T PRK14575 156 IDAVMPN--VDFVDS--SSIFNELR 176 (406)
T ss_pred HHHhCCC--CeEEEc--HHHHHHHH
Confidence 9988764 488997 88999886
No 44
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.80 E-value=8.2e-07 Score=98.38 Aligned_cols=131 Identities=24% Similarity=0.315 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcC--Cc--eEEEEeCC-ceEEEeCcccHHHH
Q 005183 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTG--SA--GTAVVTKD-KAALWTDGRYFLQA 154 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtG--s~--g~~vvt~~-~a~L~tD~RY~~qA 154 (710)
.+..|+.++|..|.+ +++|++++++. .|++|+|||+. .. ..++++.+ +++|+++++|..++
T Consensus 9 ~~~~rl~~~~~~~~~--~~~~~~~~~~~------------~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 74 (384)
T COG0006 9 EYRARLARLRELMEE--AGLDALLLTSP------------SNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRGRDEEAA 74 (384)
T ss_pred HHHHHHHHHHHHHHH--cCCcEEEecCC------------CceEEEeCCCCCcccceEEEEEcCCCceEEEEcchhHHHH
Confidence 456899999999999 99999999997 69999999994 43 34445544 59999999999999
Q ss_pred HhhcCC---cEEEEEcCCCCCC---CHHHHHHHhcCCCCeEEEcCCC--CcHHHHHHHHHHHhhCCCEEEEccCcchHHH
Q 005183 155 EKQLSS---SWILMRSGNHGVP---TTFEWLNDVLAPGGRVGIDPFL--FSSDAAEELKEAIAKKNHELVYLYDLNLVDV 226 (710)
Q Consensus 155 ~~e~~~---~~~~~~~~~~~~~---~~~~~l~~~l~~~~~vG~d~~~--~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~ 226 (710)
..+... .+.....+..... .+.+++...-....++|+|... +++..++.+++.+... ++++. .++++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~~~~~--~~~i~~ 150 (384)
T COG0006 75 KETSWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRA--ELVDA--SDLVDR 150 (384)
T ss_pred HhhcccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCC--EEecc--HHHHHH
Confidence 997752 3444444322111 1233333322235789999986 8999999999988754 88887 888988
Q ss_pred hh
Q 005183 227 IW 228 (710)
Q Consensus 227 iw 228 (710)
+.
T Consensus 151 lR 152 (384)
T COG0006 151 LR 152 (384)
T ss_pred HH
Confidence 85
No 45
>PRK14576 putative endopeptidase; Provisional
Probab=98.61 E-value=3.1e-06 Score=94.32 Aligned_cols=127 Identities=19% Similarity=0.213 Sum_probs=84.3
Q ss_pred HHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCC-------ceEEE--EeCC--ce-EEEeCcccH
Q 005183 84 KLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS-------AGTAV--VTKD--KA-ALWTDGRYF 151 (710)
Q Consensus 84 Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs-------~g~~v--vt~~--~a-~L~tD~RY~ 151 (710)
--+++|+.|++ +++|++|++++ .|++|||||... .|+++ ++.+ .+ +++++..+.
T Consensus 12 ~~~r~r~~M~~--~gldalll~~p------------~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~ 77 (405)
T PRK14576 12 VSRKARVVMER--EGIDALVVTVC------------DNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEA 77 (405)
T ss_pred HHHHHHHHHHH--cCCCEEEeccc------------cceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhh
Confidence 34689999999 99999999999 599999999966 13333 3344 23 788988877
Q ss_pred HHHHhhcC-----C--cEEEEEcCCCC--------------CC----CHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHH
Q 005183 152 LQAEKQLS-----S--SWILMRSGNHG--------------VP----TTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKE 206 (710)
Q Consensus 152 ~qA~~e~~-----~--~~~~~~~~~~~--------------~~----~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~ 206 (710)
.+++.... . .|.-....... .+ .+.+.|.+.-..+++||+|.+.++...+..|.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~ 157 (405)
T PRK14576 78 ASTHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDK 157 (405)
T ss_pred hhhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHh
Confidence 77753211 1 13221111000 00 111233332235589999999999999999988
Q ss_pred HHhhCCCEEEEccCcchHHHhh
Q 005183 207 AIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 207 ~l~~~~~~l~~~~~~~lvd~iw 228 (710)
.++. .++++. +++++++.
T Consensus 158 ~~~~--~~~vd~--~~~l~~lR 175 (405)
T PRK14576 158 VAPG--LKLVDS--TALFNEIR 175 (405)
T ss_pred hCCC--CeEEEc--HHHHHHHH
Confidence 7753 589987 88888875
No 46
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.73 E-value=8e-05 Score=83.38 Aligned_cols=107 Identities=16% Similarity=0.250 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHcCCCEEEEcccch------------hhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHh
Q 005183 255 KLSSLRSDLVDAGSSAIVISMLDE------------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 322 (710)
Q Consensus 255 Kl~~lr~~L~e~glDallis~~dn------------IaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~ 322 (710)
++.++|+.|++.+++|.|+.+.|. ++|++||.|+. ++++|+..++.||+|. ++-.++..
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD~-RY~~QA~~ 81 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTDG-RYFQQAEQ 81 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEcc-HHHHHHHh
Confidence 678899999999999999988764 88999999997 8999999999999995 55557777
Q ss_pred hhhcCCeEEeec---ccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHH
Q 005183 323 HLKNAGVELRPY---NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAI 370 (710)
Q Consensus 323 ~l~~~~V~i~~y---~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~ 370 (710)
+++....-.+.. ..+.+.|.+....+++||+|+.-+++..+..+.+.+
T Consensus 82 qld~~W~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l 132 (606)
T KOG2413|consen 82 QLDSNWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSL 132 (606)
T ss_pred hhcccceeeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHHHHH
Confidence 777532222333 346778888777899999999999999998887754
No 47
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.85 E-value=0.0054 Score=67.94 Aligned_cols=115 Identities=18% Similarity=0.155 Sum_probs=80.8
Q ss_pred CeEeeeEeeeeCCCCC--HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-Cc---CccccccccCC
Q 005183 514 DGTTDITRTVHFGEPT--AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR---HGTGHGVGAAL 587 (710)
Q Consensus 514 gy~tDitRT~~~G~pt--~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~---h~~GHGIG~~l 587 (710)
...+++.|+..+..|. +.+|++-+.+.++++++.++++| |++-.||++++++.+.+.|.. .. ++...++. .
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irp-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svc--t 202 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP-GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCC--T 202 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCceee--e
Confidence 3356777788887665 56678888889999999999999 999999999999998888742 11 11111111 1
Q ss_pred cccc-CCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEee
Q 005183 588 NVHE-GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (710)
Q Consensus 588 ~vhE-~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte 636 (710)
.+.+ -+..+ + ++.+|++|+++.++.|.+..|.+ .-+..|++|.+
T Consensus 203 s~N~~i~Hgi---p-~~r~L~~GDiV~iDvg~~~~GY~-aD~tRT~~VG~ 247 (396)
T PLN03158 203 SVNEVICHGI---P-DARKLEDGDIVNVDVTVYYKGCH-GDLNETFFVGN 247 (396)
T ss_pred cccccccCCC---C-CCccCCCCCEEEEEEeEEECCEE-EeEEeEEEcCC
Confidence 1111 01111 1 56789999999999999988754 48889998853
No 48
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.54 E-value=0.019 Score=59.20 Aligned_cols=99 Identities=21% Similarity=0.075 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC---ccccccccCCcccc-CCCcccccCCCCc
Q 005183 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH---GTGHGVGAALNVHE-GPQSISFRYGNMT 604 (710)
Q Consensus 530 ~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h---~~GHGIG~~l~vhE-~P~~i~~~~~~~~ 604 (710)
+.+|++.+.+.+++.++.++++| |++..||..++++.+++.|.. +.+ +....+. ..... .|. ..+ ++.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~p-G~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~--~~~~~~~~h---~~~-~~~ 74 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKP-GVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSIC--TSVNEVVCH---GIP-DDR 74 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCcccccCCCCCccee--cCCCCceeC---CCC-CCc
Confidence 45789999999999999999999 999999999999999999873 111 1101111 00111 111 111 467
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEEee
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte 636 (710)
+|++|+++.+++|....| |...+..|++|.+
T Consensus 75 ~l~~Gd~v~id~g~~~~G-Y~ad~~RT~~~G~ 105 (238)
T cd01086 75 VLKDGDIVNIDVGVELDG-YHGDSARTFIVGE 105 (238)
T ss_pred ccCCCCEEEEEEEEEECC-EEEEEEEEEECCC
Confidence 899999999999986665 4558999998854
No 49
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.34 E-value=0.027 Score=60.10 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccccCCCcccccCCCCccccCC
Q 005183 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 609 (710)
Q Consensus 530 ~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~G 609 (710)
+.++++.+.+.+++.++.+.++| |++..||.+.+++.+.+.|......++ +| +.+......+..+++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~p-G~te~ei~~~~~~~i~~~G~~~afp~~--is----~n~~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKP-GMTLLEIAEFVENRIRELGAGPAFPVN--LS----INECAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCCCCCce--ec----cCCEeeCCCCCCCCCcccCCC
Confidence 35788889999999999999999 999999999999999998854222222 22 222110011112356789999
Q ss_pred CEEEECceeeecCcceEEEEEeEEE
Q 005183 610 MIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 610 MV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+++.++.|...+| |-.-+.-|+.|
T Consensus 75 DvV~iD~G~~~dG-Y~sD~arT~~v 98 (291)
T cd01088 75 DVVKLDFGAHVDG-YIADSAFTVDF 98 (291)
T ss_pred CEEEEEEEEEECC-EEEEEEEEEec
Confidence 9999999987775 33334444444
No 50
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.89 E-value=0.041 Score=57.07 Aligned_cols=99 Identities=19% Similarity=0.133 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--C--cCccccccccCCccccCCCcccccCCCCccc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--Y--RHGTGHGVGAALNVHEGPQSISFRYGNMTPL 606 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~--~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L 606 (710)
.+|++=+.+.+++..+...++| |++..||+..+++++.+.|.. + .++..-.+. +.+.|-- ...-|+++.+|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~p-Gvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~c--iSvNe~v--~HgiP~d~~vl 87 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKP-GVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTC--ISVNEVV--AHGIPGDKKVL 87 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCceehhccCcCCCcceE--eehhhee--eecCCCCCccc
Confidence 4566667778888888899999 999999999999999987752 1 122223333 3333321 11112367899
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
++|.++.|.-|+..+|.+|= ..-|+.|.
T Consensus 88 k~GDiv~IDvg~~~dG~~~D-sa~T~~vg 115 (255)
T COG0024 88 KEGDIVKIDVGAHIDGYIGD-TAITFVVG 115 (255)
T ss_pred CCCCEEEEEEEEEECCeeee-EEEEEECC
Confidence 99999999999999876542 22344444
No 51
>PRK05716 methionine aminopeptidase; Validated
Probab=95.83 E-value=0.066 Score=55.60 Aligned_cols=97 Identities=14% Similarity=0.013 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCccccc--cccCCccccCCCcccccCCCCccc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHG--VGAALNVHEGPQSISFRYGNMTPL 606 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h~~GHG--IG~~l~vhE~P~~i~~~~~~~~~L 606 (710)
.+|++.+.+.+++.++.++++| |++..||+.++++.+++.|.. +.+..++. +....+ .-.+ ... .++.+|
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~p-G~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~-~~~~---h~~-~~~~~l 86 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKP-GVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVN-EVVC---HGI-PSDKVL 86 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEeccc-ceee---cCC-CCCccc
Confidence 4578888888999999999999 999999999999999998863 11111111 110011 0001 111 156789
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
++||++.++.|.... .|..-+..|++|
T Consensus 87 ~~Gd~v~id~g~~~~-gY~~d~~RT~~v 113 (252)
T PRK05716 87 KEGDIVNIDVTVIKD-GYHGDTSRTFGV 113 (252)
T ss_pred CCCCEEEEEEEEEEC-CEEEEeEEEEEC
Confidence 999999999998764 456777788777
No 52
>PRK12896 methionine aminopeptidase; Reviewed
Probab=95.33 E-value=0.1 Score=54.34 Aligned_cols=107 Identities=17% Similarity=0.111 Sum_probs=72.2
Q ss_pred EeeeeCCCCCH--HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC---ccc--cccccCCcccc
Q 005183 520 TRTVHFGEPTA--REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH---GTG--HGVGAALNVHE 591 (710)
Q Consensus 520 tRT~~~G~pt~--e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h---~~G--HGIG~~l~vhE 591 (710)
.|++.+-.+.+ ..|++.+.+.+++.++.+.++| |++-.||...++..+.+.|.. ..+ ... -..| .+ ..
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~ 80 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEP-GMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCIS--VN-EE 80 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEec--CC-Ce
Confidence 57777765443 4567777888888889999999 999999999999999998863 111 111 1122 11 11
Q ss_pred CCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 592 GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 592 ~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
.+. ..+ ++.+|++|.++.++.|....| |..-+..|+++.
T Consensus 81 ~~h---~~p-~~~~l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~vG 119 (255)
T PRK12896 81 VAH---GIP-GPRVIKDGDLVNIDVSAYLDG-YHGDTGITFAVG 119 (255)
T ss_pred eEe---cCC-CCccCCCCCEEEEEEeEEECc-EEEeeEEEEECC
Confidence 111 111 457899999999999987655 556667777663
No 53
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=95.12 E-value=0.13 Score=48.27 Aligned_cols=98 Identities=16% Similarity=0.244 Sum_probs=59.4
Q ss_pred cchhHHHHHHHHHHHHHHcCCCEEEEccc----------------chhhhhcCCCCCCCCCCceeEEEEEE-eC--CceE
Q 005183 248 AGLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVPHSPVMYAYLIV-EM--DRAK 308 (710)
Q Consensus 248 ag~~~~~Kl~~lr~~L~e~glDallis~~----------------dnIaYLtg~rg~di~~~Pv~~a~liV-~~--~~~~ 308 (710)
+.+++++|+++|.+.|.+.+ ++||.+. .|+.||||+.-.+ +++++ .. ++.+
T Consensus 2 ~~~~~~~RR~~l~~~l~~~~--~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~ 71 (134)
T PF05195_consen 2 PAEEYAERRKKLAEKLPDNS--IVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKST 71 (134)
T ss_dssp EHHHHHHHHHHHHHHSHSSE--EEEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCc--EEEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEE
Confidence 35789999999999998732 2333221 3699999987555 67777 33 4789
Q ss_pred EEEeCCCCCH--------HHHhhhhcCCe-EEeecccHHHHHHHHHhcCCEEEEeC
Q 005183 309 LFVDDSKVTP--------DVMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDP 355 (710)
Q Consensus 309 Lfvd~~k~~~--------~~~~~l~~~~V-~i~~y~~i~~~l~~l~~~~~~i~ld~ 355 (710)
||++...... ...+.....|| ++.+.+++.+.|.++..+..++.++.
T Consensus 72 LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~ 127 (134)
T PF05195_consen 72 LFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDL 127 (134)
T ss_dssp EEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-T
T ss_pred EEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEEC
Confidence 9997543221 12222233466 78888999999999887666677765
No 54
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.77 E-value=0.26 Score=51.34 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCcccc-----ccccCCccccCCC-cccccCCCCc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGH-----GVGAALNVHEGPQ-SISFRYGNMT 604 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GH-----GIG~~l~vhE~P~-~i~~~~~~~~ 604 (710)
.+|++-....+.++.+..+++| |+|..|||.++.+..-++|.+ +..+|+ ++- -.|.|--. .| | +.+
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~P-gvTTdEiD~~VH~a~Ierg~Y-PSPLnYy~FPKS~C--TSVNEviCHGI---P-D~R 195 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRP-GVTTDEIDRAVHNAIIERGAY-PSPLNYYGFPKSVC--TSVNEVICHGI---P-DSR 195 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHHHhcCCc-CCCcccCCCchhhh--cchhheeecCC---C-CcC
Confidence 4566777778899999999999 999999999999988887742 111111 111 22223110 01 1 567
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEEeec
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~ 637 (710)
+||.|.++.|...+|..|..|= +..|++|.+-
T Consensus 196 pLedGDIvNiDVtvY~~GyHGD-lneTffvG~V 227 (369)
T KOG2738|consen 196 PLEDGDIVNIDVTVYLNGYHGD-LNETFFVGNV 227 (369)
T ss_pred cCCCCCEEeEEEEEEeccccCc-cccceEeecc
Confidence 8999999999999999876553 5667777664
No 55
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=92.60 E-value=1.1 Score=49.96 Aligned_cols=103 Identities=13% Similarity=0.013 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC--ccccccccC--Ccccc-CCCcccccCC-CC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGAA--LNVHE-GPQSISFRYG-NM 603 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h--~~GHGIG~~--l~vhE-~P~~i~~~~~-~~ 603 (710)
.++++-+.+.+++..+.+.++| |++..||+..+.+.+++.+-. |.. ...+|+++. +.+.+ -+..+ +.++ ++
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikp-G~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~-P~~~d~~ 98 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSP-GAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFS-PLKSDQD 98 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCC-CCCCCCC
Confidence 3456666777888888999999 999999999999988875421 111 112233211 22211 11101 1112 24
Q ss_pred ccccCCCEEEECceeeecCcceEEEEEeEEEee
Q 005183 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (710)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte 636 (710)
.+|++|.++.|..|...+| |..-+..|++|.+
T Consensus 99 ~~Lk~GDvVkIDlG~~idG-Y~aD~arTv~vG~ 130 (389)
T TIGR00495 99 YILKEGDVVKIDLGCHIDG-FIALVAHTFVVGV 130 (389)
T ss_pred cCcCCCCEEEEEEEEEECC-EEEEEEEEEEECC
Confidence 7899999999999998876 5677888998864
No 56
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=92.55 E-value=1.1 Score=48.02 Aligned_cols=95 Identities=14% Similarity=0.163 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCcccccCCCCccccC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 608 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~ 608 (710)
..+++-+.+.+++..+.+.++| |++-.||.+.+...+.+.|.. |+..+ +++.. ..|-.|. ++++.+|++
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~-G~se~el~~~~e~~~~~~g~~~aFp~~v--s~n~~-~~H~~p~-----~~d~~~l~~ 77 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVP-GVKLLEVAEFVENRIRELGAEPAFPCNI--SINEC-AAHFTPK-----AGDKTVFKD 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcce--ecCCE-eeCCCCC-----CCcCccCCC
Confidence 4567777788888889999999 999999999999999998864 32222 12211 1232332 224568999
Q ss_pred CCEEEECceeeecCcceEEEEEeEEEe
Q 005183 609 GMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 609 GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
|.++.++.|...+| |-.-+..|+.|.
T Consensus 78 GDvV~iD~G~~~dG-Y~aD~arT~~vG 103 (295)
T TIGR00501 78 GDVVKLDLGAHVDG-YIADTAITVDLG 103 (295)
T ss_pred CCEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 99999999988776 556666777663
No 57
>PRK08671 methionine aminopeptidase; Provisional
Probab=91.53 E-value=2.1 Score=45.59 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCcccccCCCCcccc
Q 005183 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 607 (710)
Q Consensus 530 ~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~ 607 (710)
+..+++-+.+.++...+.+.++| |++-.||...+++.+.+.|.. |+..+ ++|.. ..|-.|. ++++.+|+
T Consensus 3 ~~~r~A~~I~~~~~~~~~~~i~p-G~se~ei~~~~~~~i~~~g~~~afp~~v--s~n~~-~~H~~p~-----~~d~~~l~ 73 (291)
T PRK08671 3 EKYLEAGKIASKVREEAAKLIKP-GAKLLDVAEFVENRIRELGAKPAFPCNI--SINEV-AAHYTPS-----PGDERVFP 73 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCccCCCCEE--eeCCC-ccCCCCC-----CCCCcccC
Confidence 35678888888999999999999 999999999999999998753 32211 22211 1232231 22467899
Q ss_pred CCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 608 EGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
+|.++.++.|...+| |-.-+..|+++.
T Consensus 74 ~GDvV~iD~G~~~dG-Y~aD~arT~~vG 100 (291)
T PRK08671 74 EGDVVKLDLGAHVDG-YIADTAVTVDLG 100 (291)
T ss_pred CCCEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 999999999987765 455556666663
No 58
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=90.39 E-value=2.5 Score=43.58 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccc-cCCCcccccCCCCccccCC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVH-EGPQSISFRYGNMTPLVEG 609 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vh-E~P~~i~~~~~~~~~L~~G 609 (710)
.++++-+.+.++..++.+.++| |++-.||...++..+.+.|... ..+..|+ .+.+ ..|. ..+ ++.+|++|
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~p-G~tE~ei~~~~~~~~~~~G~~~--~~~~~v~--~g~~~~~~H---~~~-~~~~l~~G 73 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRP-GMSEYELEAEFEYEFRSRGARL--AYSYIVA--AGSNAAILH---YVH-NDQPLKDG 73 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCCc--CCCCeEE--ECCCccccC---CCc-CCCcCCCC
Confidence 4678888999999999999999 9999999999999999998751 1122222 1111 1121 111 46789999
Q ss_pred CEEEECceeeecCcceEEEEEeEEE
Q 005183 610 MIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 610 MV~siEPgiy~~g~~GiriEd~v~V 634 (710)
.++.++.|....| |-.-+..|+.|
T Consensus 74 d~v~vD~g~~~~G-Y~ad~~Rt~~v 97 (243)
T cd01087 74 DLVLIDAGAEYGG-YASDITRTFPV 97 (243)
T ss_pred CEEEEEeCceECC-EeeeeeEEEEe
Confidence 9999998876553 45556677766
No 59
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=90.23 E-value=2.3 Score=42.33 Aligned_cols=97 Identities=19% Similarity=0.052 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCcccccCCCCccccCC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 609 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~G 609 (710)
..|++-+.+.++..++.+.++| |++-.||...++..+.+.|.. +.+.+--+.| .+ ...|. ..+ ++.+|++|
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g--~~-~~~~h---~~~-~~~~l~~g 74 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKP-GMTEREVAAELEYFMRKLGAEGPSFDTIVASG--PN-SALPH---GVP-SDRKIEEG 74 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC--cc-ccccC---CCC-CCcCcCCC
Confidence 4678888888899899999999 999999999999999988874 3333222233 11 01121 112 45789999
Q ss_pred CEEEECceeeecCcceEEEEEeEEEee
Q 005183 610 MIVSNEPGYYEDHAFGIRIENLLYVKE 636 (710)
Q Consensus 610 MV~siEPgiy~~g~~GiriEd~v~Vte 636 (710)
.++.++.|....| |-.-+..|++|.+
T Consensus 75 d~v~id~g~~~~g-y~~d~~RT~~~g~ 100 (208)
T cd01092 75 DLVLIDFGAIYDG-YCSDITRTVAVGE 100 (208)
T ss_pred CEEEEEeeeeECC-EeccceeEEECCC
Confidence 9999999875443 4556677777753
No 60
>PRK12897 methionine aminopeptidase; Reviewed
Probab=90.06 E-value=3 Score=43.26 Aligned_cols=96 Identities=19% Similarity=0.053 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc----CccccccccCCccccCCCcccccCCCCcccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHEGPQSISFRYGNMTPLV 607 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~----h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~ 607 (710)
+|++-+.+.+++.++.+.++| |++-.||...+...+++.|.... .+....|....+- ..|. ..+ ++.+|+
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~-~~~H---~~p-~~~~l~ 86 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKP-GITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVND-EMCH---AFP-ADVPLT 86 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCC-Eeec---CCC-CCcccC
Confidence 356666777888888999999 99999999999999999886421 0111111100110 0111 111 456899
Q ss_pred CCCEEEECceeeecCcceEEEEEeEEE
Q 005183 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|.++.++-|.-..| |..-+..|+.|
T Consensus 87 ~Gd~V~iD~g~~~~G-Y~sD~tRT~~v 112 (248)
T PRK12897 87 EGDIVTIDMVVNLNG-GLSDSAWTYRV 112 (248)
T ss_pred CCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 999999998865443 44566677766
No 61
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=89.86 E-value=2.3 Score=42.50 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHH-HHHcCCC-CcCccccccccCCccccC-CCcccccCCCCcccc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLD-YRHGTGHGVGAALNVHEG-PQSISFRYGNMTPLV 607 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~-l~~~G~~-~~h~~GHGIG~~l~vhE~-P~~i~~~~~~~~~L~ 607 (710)
..|++...+.+++.++.+.++| |++-.||.+.+.+. +.+.|.. ..+..-=+.| .+.. |. +.+ ++..|+
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~~~---~~~-~~~~l~ 72 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRP-GMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSG----PNTDLPH---YTP-TDRRLQ 72 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-TCBHHHHHHHHHHHHHHHTTTTEESSESEEEEC----CCCGETT---TBC-CSSBES
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHHcCCCcccCCceEecC----Ccceecc---eec-cceeee
Confidence 4688889999999999999999 99999999999987 6777742 2222111122 1111 21 122 567899
Q ss_pred CCCEEEECceeeecCcceEEEEEeEEE
Q 005183 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|+++.++-+.-..| |-.-+..|+++
T Consensus 73 ~gd~v~id~~~~~~g-y~~d~~Rt~~~ 98 (207)
T PF00557_consen 73 EGDIVIIDFGPRYDG-YHADIARTFVV 98 (207)
T ss_dssp TTEEEEEEEEEEETT-EEEEEEEEEES
T ss_pred cCCcceeeccceeee-eEeeeeeEEEE
Confidence 999999998876553 45556666655
No 62
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=88.40 E-value=4.3 Score=41.95 Aligned_cols=95 Identities=18% Similarity=0.096 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCc-cc----cccccCCccccCCCcccccCCCCcc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHG-TG----HGVGAALNVHEGPQSISFRYGNMTP 605 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h~-~G----HGIG~~l~vhE~P~~i~~~~~~~~~ 605 (710)
.|++.+.+.+++.++.++++| |++-.||...++..+++.|.. ..++ .+ .+.| .+ ...| .+.+ ++.+
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~~~---H~~~-~~~~ 83 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKP-GVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCIS--VN-EVVI---HGIP-DKKV 83 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEec--cc-cEEE---ecCC-CCcc
Confidence 356666667777888888999 999999999999999999863 1111 11 1122 11 0111 1112 5678
Q ss_pred ccCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 606 L~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
|++|.++.++.|.-..| |-.-+..|++|.
T Consensus 84 l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~vG 112 (247)
T TIGR00500 84 LKDGDIVNIDVGVIYDG-YHGDTAKTFLVG 112 (247)
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEcC
Confidence 99999999998865443 566677777773
No 63
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=88.35 E-value=4.5 Score=45.85 Aligned_cols=92 Identities=15% Similarity=0.041 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHH----HHcCCC----CcCccccccccCCccccCCCcccccCCCCc
Q 005183 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSL----WKIGLD----YRHGTGHGVGAALNVHEGPQSISFRYGNMT 604 (710)
Q Consensus 533 ~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l----~~~G~~----~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~ 604 (710)
+++-+++.+++..+...++| |++..||...+...+ .+.|.. |+. +=+++.. ..|-.|. ++++.
T Consensus 162 R~AaeIa~~vl~~~~~~Ikp-G~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt--~vS~N~~-aaH~tP~-----~gd~~ 232 (470)
T PTZ00053 162 RRAAEVHRQVRRYAQSVIKP-GVKLIDICERIESKSRELIEADGLKCGWAFPT--GCSLNHC-AAHYTPN-----TGDKT 232 (470)
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHHhcCCcccCCCCc--eeecCcc-ccCCCCC-----CCCCc
Confidence 44455555666777788999 999998877655544 444442 222 1122211 1233332 23567
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|++|.++.|..|....|. -+-+.-|++|
T Consensus 233 vLk~GDvVkID~G~~vdGY-iaD~ArTv~v 261 (470)
T PTZ00053 233 VLTYDDVCKLDFGTHVNGR-IIDCAFTVAF 261 (470)
T ss_pred EecCCCeEEEEEeEEECCE-EEeEEEEEEe
Confidence 8999999999999887764 4445556655
No 64
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=88.32 E-value=4.3 Score=41.59 Aligned_cols=96 Identities=14% Similarity=0.054 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC---CCcCcccc----ccccCCccccCCCcccccCCCC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL---DYRHGTGH----GVGAALNVHEGPQSISFRYGNM 603 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~---~~~h~~GH----GIG~~l~vhE~P~~i~~~~~~~ 603 (710)
-+|++-..+.+++.++.+.++| |++-.||.+.+...+.+.|- .+.+..+. ..| .+ ...|... .++
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~p-G~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G--~~-~~~~H~~----~~~ 74 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIRE-GVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSG--IN-TDGAHNP----VTN 74 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEee--cc-ccccCCC----CCC
Confidence 4678888889999999999999 99999999999999988773 22211110 122 11 1112111 156
Q ss_pred ccccCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
.+|++|.++.++.+....| |-.-++.|++|.
T Consensus 75 r~l~~GD~v~~d~g~~~~G-Y~ad~~RT~~vG 105 (228)
T cd01090 75 RKVQRGDILSLNCFPMIAG-YYTALERTLFLD 105 (228)
T ss_pred cccCCCCEEEEEEeEEECC-EeeeeEEEEECC
Confidence 7899999999998865554 455566777663
No 65
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=88.24 E-value=5.2 Score=40.92 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcC--cccccccc--CCc-----cccCCCcccccC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGA--ALN-----VHEGPQSISFRY 600 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h--~~GHGIG~--~l~-----vhE~P~~i~~~~ 600 (710)
..|++-..+.+++.++.+.++| |++-.||...+++.+.+..-. +.. ....|+++ .+. .|-.|. . .
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~p-G~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~-~---~ 77 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPL-K---S 77 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCC-C---C
Confidence 5688888999999999999999 999999988877777763221 211 11122221 011 122221 0 0
Q ss_pred CCCccccCCCEEEECceeeecCcceEEEEEeEEEee
Q 005183 601 GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 636 (710)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte 636 (710)
.++.+|++|.++.++.|....| |-.-+..|++|.+
T Consensus 78 ~~~~~l~~Gd~v~iD~g~~~~G-Y~sD~tRT~~vG~ 112 (228)
T cd01089 78 DATYTLKDGDVVKIDLGCHIDG-YIAVVAHTIVVGA 112 (228)
T ss_pred CCCcccCCCCEEEEEEEEEECC-EEEEEEEEEEeCC
Confidence 2567899999999999987765 5666788888754
No 66
>PRK07281 methionine aminopeptidase; Reviewed
Probab=87.55 E-value=4.2 Score=43.33 Aligned_cols=82 Identities=15% Similarity=0.070 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCC-cCc-cccccccC----Cccc-cCCCcccccCCCCc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-RHG-TGHGVGAA----LNVH-EGPQSISFRYGNMT 604 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~-~h~-~GHGIG~~----l~vh-E~P~~i~~~~~~~~ 604 (710)
+|++-+.+.+++.++.+.++| |++-.||++.++..+++.|... .+| .|++.++- ...+ .-|. ..+ ++.
T Consensus 13 mr~A~~i~~~~~~~~~~~i~p-G~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H---~~p-~~~ 87 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKP-GVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH---AFP-RHY 87 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC---CCC-CCc
Confidence 456677777888888899999 9999999999999999988532 111 11111100 1111 1121 112 567
Q ss_pred cccCCCEEEECcee
Q 005183 605 PLVEGMIVSNEPGY 618 (710)
Q Consensus 605 ~L~~GMV~siEPgi 618 (710)
.|++|.++.++-|.
T Consensus 88 ~l~~Gd~v~iD~g~ 101 (286)
T PRK07281 88 ILKEGDLLKVDMVL 101 (286)
T ss_pred CcCCCCEEEEEecc
Confidence 89999999999875
No 67
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=86.81 E-value=4.8 Score=39.54 Aligned_cols=96 Identities=19% Similarity=0.108 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccccCCCcccccCCCCccccCCC
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGM 610 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GM 610 (710)
..+++-..+.++..++...++| |++-.|+...+++.+.+.|..+.+.+-=+.| +......+.+ ++.++++|.
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g------~~~~~~h~~~-~~~~i~~gd 74 (207)
T cd01066 3 RLRKAAEIAEAAMAAAAEAIRP-GVTEAEVAAAIEQALRAAGGYPAGPTIVGSG------ARTALPHYRP-DDRRLQEGD 74 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcEEEEC------ccccCcCCCC-CCCCcCCCC
Confidence 4678888889999999999999 9999999999999999998733332222222 1001111222 356899999
Q ss_pred EEEECceeeecCcceEEEEEeEEEe
Q 005183 611 IVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 611 V~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
++.++.|....| |-.-+..++++.
T Consensus 75 ~v~~d~g~~~~g-y~~d~~rt~~~g 98 (207)
T cd01066 75 LVLVDLGGVYDG-YHADLTRTFVIG 98 (207)
T ss_pred EEEEEeceeECC-CccceeceeEcC
Confidence 999998876553 445566666664
No 68
>PRK12318 methionine aminopeptidase; Provisional
Probab=86.60 E-value=5.7 Score=42.35 Aligned_cols=95 Identities=15% Similarity=0.020 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-----CcC-ccccccccCCcccc-CCCcccccCCCCc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-----YRH-GTGHGVGAALNVHE-GPQSISFRYGNMT 604 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-----~~h-~~GHGIG~~l~vhE-~P~~i~~~~~~~~ 604 (710)
+|++-..+.+++.++.++++| |++-.||...+++.+.+.|.. +.. +....|+ ....+ -|. ..+ ++.
T Consensus 52 ~R~Aa~I~~~a~~a~~~~irp-G~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p-~~~ 124 (291)
T PRK12318 52 IRKACQVTARILDALCEAAKE-GVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTIC--TSLNEVICH---GIP-NDI 124 (291)
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceE--eeccceeec---CCC-CCC
Confidence 356666777888888999999 999999999888888887742 110 0111121 11111 011 111 567
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|++|.++.++.|....| |..-+..|++|
T Consensus 125 ~l~~GD~V~vD~g~~~~G-Y~aDitRT~~v 153 (291)
T PRK12318 125 PLKNGDIMNIDVSCIVDG-YYGDCSRMVMI 153 (291)
T ss_pred ccCCCCEEEEEEeEEECc-EEEEEEEEEEC
Confidence 899999999999876544 56667777776
No 69
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=84.82 E-value=2.1 Score=41.60 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhcCCC----CCccEEEEcCCC-cccccccccccccceEecCCcCCceEEEEeCCceEEEeCcc---cHH
Q 005183 81 PDEKLRALRELFSRPG----VNIDAYIIPSQD-AHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGR---YFL 152 (710)
Q Consensus 81 ~~~Rl~~Lr~~m~~~~----~~lDa~iI~~~D-~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~R---Y~~ 152 (710)
..+||++|.+..++.. .++||++|.... ..-+.|.-.. .=-.||.||-=..-++|+|+++.+++|... +..
T Consensus 6 F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~-aLq~WLlGYEfpdTiiv~tk~~i~~ltS~KKa~~L~ 84 (163)
T PF14826_consen 6 FHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKST-ALQTWLLGYEFPDTIIVFTKKKIHFLTSKKKAKFLE 84 (163)
T ss_dssp HHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHH-HHHHHHHSS--SSEEEEEETTEEEEEEEHHHHHCCC
T ss_pred HHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHH-HHHHHHhcccHhhhhhhhcCCEEEEEeCHHHHHHHH
Confidence 3589999999999831 248998887652 1112221110 012499999888888889999999999754 555
Q ss_pred HHHhhc----CCcEEEEEcCCCCCCCH---HHHHHHhc-CCCCeEEEcC-CCCcHHHHHHHHHHHhhCCCEEEEc
Q 005183 153 QAEKQL----SSSWILMRSGNHGVPTT---FEWLNDVL-APGGRVGIDP-FLFSSDAAEELKEAIAKKNHELVYL 218 (710)
Q Consensus 153 qA~~e~----~~~~~~~~~~~~~~~~~---~~~l~~~l-~~~~~vG~d~-~~~s~~~~~~L~~~l~~~~~~l~~~ 218 (710)
|+++.. ...+++......+.+.- .+-|.+.+ ..+++||+=. +..+-...+.+.+.+.+.+++.|++
T Consensus 85 ~l~~~~~~~~~~~v~ll~R~k~d~~~~~~~f~kl~~~ik~~g~~vG~~~Kd~~~G~f~~~w~~~l~~~~~~~vDv 159 (163)
T PF14826_consen 85 PLKKPAKEGGSIPVELLVRNKKDPEKNKANFEKLIEAIKKAGKKVGVLAKDKFEGKFVDEWKEALKKSGFEKVDV 159 (163)
T ss_dssp CHCCCTTTT-SSEEEEEEE-TT-HHHHHHHHHHHHHHHHCCTSEEEE-TT----SHHHHHHHHHHCHHCSEEEE-
T ss_pred HHhhccccCCCceEEEEEeCCCCccchHHHHHHHHHHHHhcCCeEeEecCCCCCCchHHHHHHHHhhcCCceeec
Confidence 665422 12255655442221112 22233333 3678999866 4455577888888888878888887
No 70
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=78.36 E-value=14 Score=37.86 Aligned_cols=96 Identities=9% Similarity=-0.046 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCC--CChHHHHHHHHHHHHHcC-C---CCcCccccccccCCccccCCCcccccCCCCc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQS--TPGFVLDAFARSSLWKIG-L---DYRHGTGHGVGAALNVHEGPQSISFRYGNMT 604 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G--~~~~~v~~~ar~~l~~~G-~---~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~ 604 (710)
.+.+.-..+.+++..+.+.++| | ++-.||.+.+.+.+...| + .|...+.=|... ...|-.|. +.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~-G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~-~~~H~~p~-----~~~~r 77 (224)
T cd01085 5 AHIRDGVALVEFLAWLEQEVPK-GETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNG-AIVHYSPT-----EESNR 77 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCcc-CcCCCCcC-----cccCc
Confidence 3444455556888888899999 9 999999999988776654 2 122111111110 11222221 11277
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|++|.++.++.|....| |-.-+..|++|
T Consensus 78 ~l~~GD~V~iD~g~~~~g-Y~aD~~RT~~v 106 (224)
T cd01085 78 KISPDGLYLIDSGGQYLD-GTTDITRTVHL 106 (224)
T ss_pred ccCCCCEEEEEeCccCCC-cccccEEeecC
Confidence 899999999999876655 44555666665
No 71
>PRK10879 proline aminopeptidase P II; Provisional
Probab=77.20 E-value=20 Score=40.54 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc---CccccccccCCccccCCCcccccCCCCccccC
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR---HGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 608 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~---h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~ 608 (710)
+|++...+.+++.++++.++| |++-.+|.+.+...+.+.|..+. .-++-|.-. ...| +.+ ++..|++
T Consensus 182 ~r~A~~i~~~a~~~~~~~~~p-G~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G~na-~~~H-------~~~-~~~~l~~ 251 (438)
T PRK10879 182 LRRAGEISALAHTRAMEKCRP-GMFEYQLEGEIHHEFNRHGARYPSYNTIVGSGENG-CILH-------YTE-NESEMRD 251 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEcCcc-cccc-------CCC-CccccCC
Confidence 355666677888889999999 99999999999988988886432 212222110 0112 111 5578999
Q ss_pred CCEEEECceeeecCcceEEEEEeEEE
Q 005183 609 GMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 609 GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
|.++.+..|....| |..-+..|+.|
T Consensus 252 GDlVliD~G~~~~G-Y~sDitRT~~v 276 (438)
T PRK10879 252 GDLVLIDAGCEYKG-YAGDITRTFPV 276 (438)
T ss_pred CCEEEEEeCeEECC-EEEEeEEEEEE
Confidence 99999999876654 66777788877
No 72
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=70.11 E-value=35 Score=35.31 Aligned_cols=99 Identities=16% Similarity=0.059 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCC-CCCCCceeEeeCCCCcccccc---CCCCCCc
Q 005183 421 MLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-LDTSFDTISGSGANGAIIHYK---PEPGKCS 496 (710)
Q Consensus 421 mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~-~~~sf~~iv~sG~n~a~~h~~---p~~~~~~ 496 (710)
+|++......+...+++.+ +||++-.++...+.++..+. +. ....|..-++.|-.-. .|=. .+..+.+
T Consensus 121 ~~~~y~~~~~a~~~~i~~l------kpG~~~~dv~~~a~~~i~~~-~~~~~~~~~~~~GHgiGle-~hE~~~~l~~~~~~ 192 (243)
T cd01091 121 QQKNYNFLLALQEEILKEL------KPGAKLSDVYQKTLDYIKKK-KPELEPNFTKNLGFGIGLE-FRESSLIINAKNDR 192 (243)
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHHh-ChhHHHhCcCCcccccCcc-cccCccccCCCCCC
Confidence 4445555556666666655 99999999998887765432 21 1112222222221111 1111 1122347
Q ss_pred ccCCCCeEEEeccee-e----------CCeEeeeEeeeeCCC
Q 005183 497 VVDSKKLFLLDSGAQ-Y----------VDGTTDITRTVHFGE 527 (710)
Q Consensus 497 ~l~~gd~vliD~g~~-y----------~gy~tDitRT~~~G~ 527 (710)
+|++|.++.+..|.. . ..|..-++-|+.+.+
T Consensus 193 ~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 193 KLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 899999999999975 3 246677888998854
No 73
>PRK15173 peptidase; Provisional
Probab=69.67 E-value=39 Score=36.57 Aligned_cols=93 Identities=17% Similarity=0.130 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCcccccCCCCccccCCCE
Q 005183 533 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 611 (710)
Q Consensus 533 ~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV 611 (710)
+++-..+.+++.++.+.++| |++-.||.......+.+.|.. +.-..--..|. .-.|..+ .++..|++|.+
T Consensus 105 r~A~~i~~~~~~~~~~~i~~-G~tE~el~a~~~~~~~~~g~~~~~~~~~i~~G~----~~~~h~~----~~~~~l~~Gd~ 175 (323)
T PRK15173 105 RKSAEITEYGITEASKLIRV-GCTSAELTAAYKAAVMSKSETHFSRFHLISVGA----DFSPKLI----PSNTKACSGDL 175 (323)
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECC----CCccCCC----CCCCccCCCCE
Confidence 45555666777788888999 999999999887777666542 21000011221 1112111 14568999999
Q ss_pred EEECceeeecCcceEEEEEeEEEe
Q 005183 612 VSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 612 ~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
+.++.|....| |..-+..|+.|.
T Consensus 176 V~iD~g~~~~G-Y~aDitRT~~vG 198 (323)
T PRK15173 176 IKFDCGVDVDG-YGADIARTFVVG 198 (323)
T ss_pred EEEEeCccCCC-EeeeeEEEEEcC
Confidence 99998864333 566777888773
No 74
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=69.65 E-value=4.4 Score=37.94 Aligned_cols=65 Identities=18% Similarity=0.280 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCcc-c---ccccccccccceEecCCcCCceEEEE-eC--CceEEEeCcc
Q 005183 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAH-Q---SEFIAECYMRRAYISGFTGSAGTAVV-TK--DKAALWTDGR 149 (710)
Q Consensus 81 ~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h-~---se~~~~~~~~~~ylTGFtGs~g~~vv-t~--~~a~L~tD~R 149 (710)
..+|.++|.+.|.+ . .++||++.+.. . .+|.=..+.+-+||||+.-..+++|+ .. ++.+||++.+
T Consensus 6 ~~~RR~~l~~~l~~--~--~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~ 77 (134)
T PF05195_consen 6 YAERRKKLAEKLPD--N--SIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPK 77 (134)
T ss_dssp HHHHHHHHHHHSHS--S--EEEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE---
T ss_pred HHHHHHHHHHhcCC--C--cEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCC
Confidence 45799999999986 3 36666665433 2 25666667889999999988888888 22 3788998744
No 75
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=66.21 E-value=30 Score=36.56 Aligned_cols=84 Identities=18% Similarity=0.125 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHH----HHHHHHHHcCCCC--cCccccccccCCccccCCCcccccCCCCcc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDA----FARSSLWKIGLDY--RHGTGHGVGAALNVHEGPQSISFRYGNMTP 605 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~----~ar~~l~~~G~~~--~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~ 605 (710)
.+++.++-.++...+.+-++| |++.-||.. ..|..+.+.|+.- .-.+|-++.++ ..|-.| ++++.++
T Consensus 88 ~rraAE~HRqvR~yv~s~ikP-Gmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~SlN~c-AAHyTp-----NaGd~tV 160 (397)
T KOG2775|consen 88 LRRAAEAHRQVRKYVQSIIKP-GMTMIEICETIENTTRKLILENGLNAGIGFPTGCSLNHC-AAHYTP-----NAGDKTV 160 (397)
T ss_pred HHHHHHHHHHHHHHHHHhccC-cccHHHHHHHHHHHHHHHHHhccccccccCCCcccccch-hhhcCC-----CCCCcee
Confidence 344555555666677788999 999877654 4566677777642 22334443322 224344 3457899
Q ss_pred ccCCCEEEECceeeecC
Q 005183 606 LVEGMIVSNEPGYYEDH 622 (710)
Q Consensus 606 L~~GMV~siEPgiy~~g 622 (710)
|+...|+-|.-|....|
T Consensus 161 LqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 161 LKYDDVMKIDFGTHIDG 177 (397)
T ss_pred eeecceEEEeccccccC
Confidence 99999999887776543
No 76
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=62.33 E-value=37 Score=36.88 Aligned_cols=98 Identities=19% Similarity=0.123 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc-CC------CCcCccccccccCCcc-----ccCCCccccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI-GL------DYRHGTGHGVGAALNV-----HEGPQSISFR 599 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~-G~------~~~h~~GHGIG~~l~v-----hE~P~~i~~~ 599 (710)
.|.+=+.+-++...+.+.+.| |++..+|.......+.+. |- ++..|+.-..- +.+ |=.|. .+
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~-gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~--Isvnncv~h~sPl-ks-- 97 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQP-GASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTS--ISVNNCVCHFSPL-KS-- 97 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcC-CchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccce--ecccceeeccCcC-CC--
Confidence 455666777888888899999 999999976655544321 21 12222211111 111 22332 11
Q ss_pred CCCCccccCCCEEEECceeeecCcceEEEEEeEEEeec
Q 005183 600 YGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (710)
Q Consensus 600 ~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~ 637 (710)
+.+..|++|.|+-|..|..++| |-.-+..|++|++.
T Consensus 98 -d~~~~Lk~GDvVKIdLG~HiDG-fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 98 -DADYTLKEGDVVKIDLGVHIDG-FIALVAHTIVVGPA 133 (398)
T ss_pred -CCcccccCCCEEEEEeeeeecc-ceeeeeeeEEeccC
Confidence 2478999999999999999886 67778999999886
No 77
>TIGR03241 arg_catab_astB succinylarginine dihydrolase. Members of this family are succinylarginine dihydrolase (EC 3.5.3.23), the second of five enzymes in the arginine succinyltransferase (AST) pathway.
Probab=60.15 E-value=41 Score=37.01 Aligned_cols=146 Identities=21% Similarity=0.364 Sum_probs=91.9
Q ss_pred CccccccccccchhHHHHHHHHHHHHHHcCCCEEEEcccch--------hhhhcCCCCCCCCCCceeEEEEEEeC-CceE
Q 005183 238 KPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDE--------IAWLLNLRGSDVPHSPVMYAYLIVEM-DRAK 308 (710)
Q Consensus 238 ~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dn--------IaYLtg~rg~di~~~Pv~~a~liV~~-~~~~ 308 (710)
+-+|.|...|. +-.+.++.||+.|...+.+-.+|.-++. -.||+| +=||-.+ ++-.
T Consensus 257 ~vLf~He~AF~--d~~~~~~~ir~k~~~~~~~~~~ieVp~~~vsv~DAV~sYLFN-------------SQLlt~pdg~M~ 321 (443)
T TIGR03241 257 NVLFHHQQAFL--NQSQVLDELRAKLAGLGQQFVAIEVPDAEVSVADAVSSYLFN-------------SQLLSREDGKMM 321 (443)
T ss_pred ceeeEhHhhhc--CHHHHHHHHHHHhhccCCCeEEEEeccccCcHHHHHHHhhhc-------------ceeeecCCCcEE
Confidence 56788888884 4556888999999876666555533322 247777 2344434 4556
Q ss_pred EEEeCCCCCHHHHhhhhcCCeEEeecccHHHHHHHHHhcC---CEE-EEeCCCCcHHHHHHHHHHHHHHhhhcccccccc
Q 005183 309 LFVDDSKVTPDVMDHLKNAGVELRPYNSILSEIKSLAAQG---AQL-WLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKT 384 (710)
Q Consensus 309 Lfvd~~k~~~~~~~~l~~~~V~i~~y~~i~~~l~~l~~~~---~~i-~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 384 (710)
|+++. |.++. ..+..+|.++...+ +++ .+| +.+++++
T Consensus 322 Lv~P~-----Ecr~n-----------~~v~~yl~~l~~~~~PI~~v~~fD-------lrqSM~N---------------- 362 (443)
T TIGR03241 322 LVVPE-----ECREN-----------AAVWAYLNELVAGGGPIDEVRVFD-------LRESMRN---------------- 362 (443)
T ss_pred EEech-----HhhcC-----------HHHHHHHHHHHhcCCCcceEEEec-------chhhhhc----------------
Confidence 66652 22211 12344455544321 122 222 2222222
Q ss_pred ccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 005183 385 KMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVA 455 (710)
Q Consensus 385 ~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela 455 (710)
.| .+.+-++|.+-|++|++.+-.+..+++.-+.++-.|+++.- +.-++..|++
T Consensus 363 ----------GG------GPACLRLRVvl~~~E~~Avnp~~lm~~~l~~~L~~wV~~hY--RdrL~~~DLa 415 (443)
T TIGR03241 363 ----------GG------GPACLRLRVVLNDAELAAVNPAVMMNDALFATLNAWVDRHY--RDRLSAADLA 415 (443)
T ss_pred ----------CC------CceeeeeeeeCCHHHHhhcCcceecCHHHHHHHHHHHHHhc--cccCChhhcc
Confidence 11 45578899999999999999999999988888889998877 5668888776
No 78
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=50.09 E-value=53 Score=31.92 Aligned_cols=58 Identities=17% Similarity=0.308 Sum_probs=41.4
Q ss_pred chhHHHHHHHHHHHHHHcC------CCEEEEcccc----h--------hhhhcCCCCCCCCCCceeEEEEEEeCCceEEE
Q 005183 249 GLDVASKLSSLRSDLVDAG------SSAIVISMLD----E--------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 310 (710)
Q Consensus 249 g~~~~~Kl~~lr~~L~e~g------lDallis~~d----n--------IaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lf 310 (710)
...+.+||++|.+..++.. +|+++|.... + -.||+|+.-.+ ..++++.+..+++
T Consensus 3 ~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~aLq~WLlGYEfpd--------Tiiv~tk~~i~~l 74 (163)
T PF14826_consen 3 KETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTALQTWLLGYEFPD--------TIIVFTKKKIHFL 74 (163)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHHHHHHHHSS--SS--------EEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHHHHHHHhcccHhh--------hhhhhcCCEEEEE
Confidence 3567899999999999875 8999886652 2 35999987544 5677788888888
Q ss_pred EeCC
Q 005183 311 VDDS 314 (710)
Q Consensus 311 vd~~ 314 (710)
+...
T Consensus 75 tS~K 78 (163)
T PF14826_consen 75 TSKK 78 (163)
T ss_dssp EEHH
T ss_pred eCHH
Confidence 8643
No 79
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=37.00 E-value=42 Score=27.34 Aligned_cols=58 Identities=19% Similarity=0.343 Sum_probs=40.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005183 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (710)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glD 269 (710)
+|-.+++-|.-.+...+ +.+.- +.+++.+|+ +.+ ..+...+...+.+||+.|++.+.+
T Consensus 6 Lt~~e~~lL~~L~~~~~-~~vs~--~~l~~~~w~-~~~------------~~~~~~l~~~I~rLR~kL~~~~~~ 63 (77)
T PF00486_consen 6 LTPKEFRLLELLLRNPG-RVVSR--EELIEALWG-DEE------------DVSDNSLDVHISRLRKKLEDAGGD 63 (77)
T ss_dssp SSHHHHHHHHHHHHTTT-SEEEH--HHHHHHHTS-SSS------------TTCTHHHHHHHHHHHHHHHSSTTS
T ss_pred cCHHHHHHHHHHHhCCC-CCCCH--HHhCChhhh-ccc------------ccchhhHHHHHHHHHHHHhhcCCC
Confidence 56667776655554443 56675 889999996 221 345667888999999999987543
No 80
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=33.41 E-value=90 Score=34.66 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccEEEEcCC-Cccccc---ccccccccceEecCCcCCceEEEEeCC-----ceEEEeCc
Q 005183 78 QDAPDEKLRALRELFSRPGVNIDAYIIPSQ-DAHQSE---FIAECYMRRAYISGFTGSAGTAVVTKD-----KAALWTDG 148 (710)
Q Consensus 78 ~~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~-D~h~se---~~~~~~~~~~ylTGFtGs~g~~vvt~~-----~a~L~tD~ 148 (710)
...+.+|..+|-+++.+ +. .+||.+. -.|+|- |.=..+.+.+||||+.-.++++++.+. ...||.++
T Consensus 64 ~~Ey~~RR~rl~~ll~~--~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~ 139 (488)
T KOG2414|consen 64 ATEYKERRSRLMSLLPA--NA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPP 139 (488)
T ss_pred HHHHHHHHHHHHHhCCc--cc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCC
Confidence 46678899999999998 43 5555543 345554 444567899999999999998888531 23455554
Q ss_pred c
Q 005183 149 R 149 (710)
Q Consensus 149 R 149 (710)
+
T Consensus 140 k 140 (488)
T KOG2414|consen 140 K 140 (488)
T ss_pred C
Confidence 4
No 81
>TIGR00035 asp_race aspartate racemase.
Probab=29.95 E-value=4.8e+02 Score=26.43 Aligned_cols=138 Identities=16% Similarity=0.161 Sum_probs=74.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHHHHhh
Q 005183 78 QDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQ 157 (710)
Q Consensus 78 ~~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e 157 (710)
..+....+.+.-+.|++ .|+|+++|+-.- ...+..+.++.
T Consensus 57 ~~~~~~~l~~~~~~L~~--~g~d~iviaCNT--------------------------------------ah~~~~~l~~~ 96 (229)
T TIGR00035 57 EDRPRPILIDIAVKLEN--AGADFIIMPCNT--------------------------------------AHKFAEDIQKA 96 (229)
T ss_pred cchHHHHHHHHHHHHHH--cCCCEEEECCcc--------------------------------------HHHHHHHHHHh
Confidence 34466777777888888 899999997631 11122344554
Q ss_pred cCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCC
Q 005183 158 LSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPN 237 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~ 237 (710)
++- .+.... +...+.+++ .+.++||+=+...|...-. +++.|.+.|++.+.. ...+++.+-.
T Consensus 97 ~~i--Pii~i~----~~~~~~~~~--~~~~~VgvLaT~~T~~s~~-y~~~l~~~g~~v~~p-~~~~~~~i~~-------- 158 (229)
T TIGR00035 97 IGI--PLISMI----EETAEAVKE--DGVKKAGLLGTKGTMKDGV-YEREMKKHGIEIVTP-DKEEQEAIMS-------- 158 (229)
T ss_pred CCC--CEechH----HHHHHHHHH--cCCCEEEEEecHHHHHhHH-HHHHHHHCCCEEECC-CHHHHHHHHH--------
Confidence 432 122111 112233433 3457899887666665532 566666667776543 2333332210
Q ss_pred Cccccccccccc-hhHHHHHHHHHHHHHHcCCCEEEEcc
Q 005183 238 KPIRVHALKYAG-LDVASKLSSLRSDLVDAGSSAIVISM 275 (710)
Q Consensus 238 ~~i~~~~~~~ag-~~~~~Kl~~lr~~L~e~glDallis~ 275 (710)
.++ ..++-.. ....+.+.++-+.|.+.|+|++|+.-
T Consensus 159 -~i~-~~~~~g~~~~~~~~l~~~~~~l~~~gad~iILgC 195 (229)
T TIGR00035 159 -GIY-DEVKAGNIELGRELLLKIAKELEERGAEGIILGC 195 (229)
T ss_pred -HHH-HHHhcCCcHHHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 011 0000000 34555677777777888999988753
No 82
>PRK13607 proline dipeptidase; Provisional
Probab=27.78 E-value=3.2e+02 Score=31.01 Aligned_cols=94 Identities=15% Similarity=0.086 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccccCCCcccccCCCCccccCCCE
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 611 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV 611 (710)
+|++-.++.+++.+++++++| |++-.+|........ ..|.. ....+.-|+ .+.+- ..+.+.+.+..++++|.+
T Consensus 170 mr~A~~i~~~a~~~~~~~i~p-G~tE~ei~~~~~~~~-~~~~~-~~~y~~iva--~G~na--a~~H~~~~~~~~~~~Gd~ 242 (443)
T PRK13607 170 MREAQKIAVAGHRAAKEAFRA-GMSEFDINLAYLTAT-GQRDN-DVPYGNIVA--LNEHA--AVLHYTKLDHQAPAEMRS 242 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHh-CCCCc-CCCCCcEEE--ecCcc--eEecCCccCCCCCCCCCE
Confidence 456677777888899999999 999999876543221 11110 001111111 11100 001111223346889999
Q ss_pred EEECceeeecCcceEEEEEeEE
Q 005183 612 VSNEPGYYEDHAFGIRIENLLY 633 (710)
Q Consensus 612 ~siEPgiy~~g~~GiriEd~v~ 633 (710)
+.+.-|....| |..-+..|+.
T Consensus 243 vliD~Ga~~~G-Y~sDiTRTf~ 263 (443)
T PRK13607 243 FLIDAGAEYNG-YAADITRTYA 263 (443)
T ss_pred EEEEeeEEECC-EEecceEEEe
Confidence 99988865554 4555555655
No 83
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=25.75 E-value=96 Score=25.13 Aligned_cols=58 Identities=17% Similarity=0.310 Sum_probs=35.8
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCC
Q 005183 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (710)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~gl 268 (710)
+|..+++-|.-.+...+ +.++- +.+++.+|+ +.+. .-+-..+..-+.+||+.|.+.+.
T Consensus 6 Lt~~e~~lL~~L~~~~~-~~vs~--~~l~~~lw~-~~~~-----------~~~~~~l~~~i~~LR~~l~~~~~ 63 (78)
T smart00862 6 LTPKEFRLLELLLRNPG-RVVSR--EELLEAVWG-DDDD-----------DVDDNTLDVHISRLRKKLEDDGA 63 (78)
T ss_pred cCHHHHHHHHHHHhCCC-CccCH--HHHHHHHcC-CCCC-----------CCccchHHHHHHHHHHHHhcCCC
Confidence 45666664433333333 45554 889999995 3320 11225577899999999987654
No 84
>PF07385 DUF1498: Protein of unknown function (DUF1498); InterPro: IPR010864 This family consists of several hypothetical bacterial proteins of around 225 residues in length. The function of this family is unknown.; PDB: 3MPB_B 3KMH_A.
Probab=25.32 E-value=65 Score=32.77 Aligned_cols=51 Identities=27% Similarity=0.410 Sum_probs=27.1
Q ss_pred CCCccccCCCEEEECceeee---cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 005183 601 GNMTPLVEGMIVSNEPGYYE---DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (710)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~---~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P 658 (710)
+...+|.||.-+|+.||+|. .+.++|=+.++=-|.+|.+.|. |+ +++..+|
T Consensus 153 G~~l~L~PGESiTL~Pg~yH~Fw~e~g~vLigEVStvNDD~tDN~-----F~--~pigRfp 206 (225)
T PF07385_consen 153 GTQLRLNPGESITLPPGIYHWFWGEGGDVLIGEVSTVNDDNTDNR-----FL--EPIGRFP 206 (225)
T ss_dssp T-EEEE-TT-EEEE-TTEEEEEEE-TTSEEEEEEEE---TTTSEE-----ES--S---SS-
T ss_pred CceEEeCCCCeEeeCCCCeeeEEecCCCEEEEeeecccCCCcccc-----cc--CCcCCCC
Confidence 46678999999999999985 2334566666666666665554 34 5566666
No 85
>PRK00865 glutamate racemase; Provisional
Probab=23.00 E-value=1.9e+02 Score=30.24 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=48.1
Q ss_pred CeEE-EcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHH
Q 005183 187 GRVG-IDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVD 265 (710)
Q Consensus 187 ~~vG-~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e 265 (710)
..|| ||+-.=-+.-++++++.++.. .++.+ . |... -|--. -+.++..++..++-+.|.+
T Consensus 6 ~~IgvfDSGiGGLtvl~~i~~~lp~~--~~iY~--~---D~~~---~PYG~----------ks~~~i~~~~~~~~~~L~~ 65 (261)
T PRK00865 6 APIGVFDSGVGGLTVLREIRRLLPDE--HIIYV--G---DTAR---FPYGE----------KSEEEIRERTLEIVEFLLE 65 (261)
T ss_pred CeEEEEECCccHHHHHHHHHHHCCCC--CEEEE--e---cCCC---CCCCC----------CCHHHHHHHHHHHHHHHHh
Confidence 4577 888888888899999998764 55554 2 2221 11110 1356777888888888999
Q ss_pred cCCCEEEEccc
Q 005183 266 AGSSAIVISML 276 (710)
Q Consensus 266 ~glDallis~~ 276 (710)
.|+|+++|.--
T Consensus 66 ~g~d~iVIaCN 76 (261)
T PRK00865 66 YGVKMLVIACN 76 (261)
T ss_pred CCCCEEEEeCc
Confidence 99999888654
No 86
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=22.72 E-value=1.1e+02 Score=25.83 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005183 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (710)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glD 269 (710)
+|-.+++-|.-.+...| +.+.- +.+++.+|+ +.+.. +-..+..-+.+||+.|.+.+..
T Consensus 24 Lt~~e~~lL~~L~~~~~-~~vs~--~~l~~~lw~-~~~~~------------~~~~l~~~I~rLRkkl~~~~~~ 81 (95)
T cd00383 24 LTPKEFELLELLARNPG-RVLSR--EQLLEAVWG-DDYDV------------DDRTVDVHISRLRKKLEDDPSN 81 (95)
T ss_pred eCHHHHHHHHHHHhCCC-CcCCH--HHHHHHhcC-CCCCC------------CcccHHHHHHHHHHHhccCCCC
Confidence 45566665555544433 56664 889999995 32211 1234667899999999876543
No 87
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.93 E-value=3e+02 Score=28.58 Aligned_cols=124 Identities=19% Similarity=0.239 Sum_probs=67.9
Q ss_pred CCCccccCCCCCCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEE------E---Ee
Q 005183 68 PSSEFNRNRTQDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTA------V---VT 138 (710)
Q Consensus 68 ~~~~~~~~~~~~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~------v---vt 138 (710)
|..+..+-...+.-.+...+|++.|++ - | +..++.+..||.-+. - ..
T Consensus 92 ~~~e~gtL~~~~s~~e~~~rl~~a~~~--v-------~---------------~~~GlnNhmGs~~tsn~~aM~~~m~~L 147 (250)
T COG2861 92 PKIEPGTLRPGMSAEEILRRLRKAMNK--V-------P---------------DAVGLNNHMGSRFTSNEDAMEKLMEAL 147 (250)
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHhh--C-------c---------------cceeehhhhhhhhcCcHHHHHHHHHHH
Confidence 444443333357777899999999998 2 1 233444455552110 0 01
Q ss_pred CCceEEEeCcccHHH-----HHhhcCCc---EEEEEcCCCCCCCHHHHHHH---h---c-CCCCeEEEcC-CCCcHHHHH
Q 005183 139 KDKAALWTDGRYFLQ-----AEKQLSSS---WILMRSGNHGVPTTFEWLND---V---L-APGGRVGIDP-FLFSSDAAE 202 (710)
Q Consensus 139 ~~~a~L~tD~RY~~q-----A~~e~~~~---~~~~~~~~~~~~~~~~~l~~---~---l-~~~~~vG~d~-~~~s~~~~~ 202 (710)
+.+-.+|.|++=.-+ ..++.... -.+..++ ..+..+.+++ . . ..|..||+=. .--|++..+
T Consensus 148 k~r~l~flDs~T~a~S~a~~iAk~~gVp~~~rdvfLD~---e~~~~~V~kql~~~~~~Ark~G~ai~IGh~~~~Tv~vl~ 224 (250)
T COG2861 148 KERGLYFLDSGTIANSLAGKIAKEIGVPVIKRDVFLDD---EDTEAAVLKQLDAAEKLARKNGSAIGIGHPHKNTVAVLQ 224 (250)
T ss_pred HHCCeEEEcccccccchhhhhHhhcCCceeeeeeeecC---cCCHHHHHHHHHHHHHHHHhcCceEEecCCchhHHHHHH
Confidence 334577888876554 22222211 1222222 2333333322 1 1 2456677654 447888888
Q ss_pred HHHHHHhhCCCEEEEc
Q 005183 203 ELKEAIAKKNHELVYL 218 (710)
Q Consensus 203 ~L~~~l~~~~~~l~~~ 218 (710)
++...|+..|++||++
T Consensus 225 ~~~~~l~~~gIelV~~ 240 (250)
T COG2861 225 QWLDELPARGIELVPV 240 (250)
T ss_pred HHHHhCCCCCeEEecH
Confidence 8888888778999996
Done!