Query 005183
Match_columns 710
No_of_seqs 452 out of 2471
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 17:55:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005183.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005183hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 1E-125 5E-130 1096.0 52.3 598 79-709 4-621 (623)
2 3q6d_A Proline dipeptidase; st 100.0 5.2E-67 1.8E-71 569.9 32.8 348 250-661 1-353 (356)
3 4ege_A Dipeptidase PEPE; struc 100.0 9.9E-66 3.4E-70 563.2 34.6 366 239-664 2-376 (378)
4 4fkc_A XAA-Pro aminopeptidase; 100.0 8.9E-65 3.1E-69 556.4 32.3 361 243-660 6-373 (377)
5 2zsg_A Aminopeptidase P, putat 100.0 8.3E-64 2.8E-68 545.2 32.6 344 254-661 2-356 (359)
6 1wn1_A Dipeptidase; prolidase, 100.0 3.1E-63 1.1E-67 539.8 29.5 344 254-662 1-354 (356)
7 1wy2_A XAA-Pro dipeptidase; st 100.0 1.5E-62 5.1E-67 533.4 33.1 341 253-660 5-349 (351)
8 1kp0_A Creatine amidinohydrola 100.0 2.6E-61 8.8E-66 533.4 33.4 366 245-663 17-397 (402)
9 3biq_A FACT complex subunit SP 100.0 2.6E-61 8.9E-66 543.4 32.9 383 245-674 6-455 (467)
10 4b28_A Metallopeptidase, famil 100.0 1.3E-60 4.5E-65 534.1 24.7 362 245-666 72-469 (470)
11 3cb6_A FACT complex subunit SP 100.0 1E-59 3.5E-64 527.2 30.4 372 245-668 6-441 (444)
12 1chm_A Creatine amidinohydrola 100.0 5.7E-59 2E-63 514.3 35.4 372 240-663 11-397 (401)
13 2v3z_A XAA-Pro aminopeptidase; 100.0 9.1E-58 3.1E-62 510.0 30.6 367 247-666 3-432 (440)
14 3ig4_A XAA-Pro aminopeptidase; 100.0 8E-58 2.7E-62 506.2 29.3 364 249-678 3-421 (427)
15 2iw2_A XAA-Pro dipeptidase; me 100.0 2.1E-52 7.1E-57 472.5 28.0 370 245-668 17-480 (494)
16 3rva_A Organophosphorus acid a 100.0 3.2E-51 1.1E-55 455.9 25.3 352 251-658 11-440 (451)
17 3l24_A XAA-Pro dipeptidase; PI 100.0 2.6E-49 9E-54 444.4 25.5 352 252-660 12-440 (517)
18 3mx6_A Methionine aminopeptida 100.0 1.8E-47 6.2E-52 398.5 22.2 229 408-662 4-258 (262)
19 3tav_A Methionine aminopeptida 100.0 2.5E-47 8.6E-52 402.2 23.4 234 401-658 21-286 (286)
20 3tb5_A Methionine aminopeptida 100.0 2.9E-47 1E-51 397.4 23.4 232 409-665 1-256 (264)
21 3pka_A Methionine aminopeptida 100.0 1.4E-46 4.6E-51 396.3 22.4 224 408-656 37-284 (285)
22 2gg2_A Methionine aminopeptida 100.0 4.3E-46 1.5E-50 388.4 22.7 230 409-662 1-255 (263)
23 3s6b_A Methionine aminopeptida 100.0 4.9E-46 1.7E-50 401.0 22.3 232 408-664 99-358 (368)
24 1o0x_A Methionine aminopeptida 100.0 7.4E-46 2.5E-50 386.3 22.2 225 407-656 11-260 (262)
25 2b3h_A Methionine aminopeptida 100.0 2.9E-45 1E-49 392.2 22.7 229 408-661 71-325 (329)
26 1qxy_A Methionyl aminopeptidas 100.0 2.1E-45 7.3E-50 380.7 20.8 223 412-660 3-251 (252)
27 4fuk_A Methionine aminopeptida 100.0 7.7E-45 2.6E-49 391.5 22.0 237 400-660 51-310 (337)
28 2q8k_A Proliferation-associate 100.0 7.3E-39 2.5E-43 351.5 24.9 204 405-619 12-238 (401)
29 1xgs_A Methionine aminopeptida 100.0 3.7E-37 1.3E-41 325.4 20.9 202 416-633 1-204 (295)
30 1b6a_A Methionine aminopeptida 100.0 1.2E-35 4.2E-40 329.0 20.5 199 408-620 154-369 (478)
31 2nw5_A Methionine aminopeptida 100.0 8.5E-35 2.9E-39 313.9 18.3 201 412-627 41-256 (360)
32 3fm3_A Methionine aminopeptida 100.0 9.8E-30 3.3E-34 275.3 21.0 201 405-618 32-246 (358)
33 3qoc_A Putative metallopeptida 99.9 5.9E-24 2E-28 198.8 8.8 127 78-227 7-134 (135)
34 3ovk_A Aminopeptidase P, XAA-P 99.8 2.5E-21 8.6E-26 180.1 10.2 122 81-227 8-131 (132)
35 3il0_A Aminopeptidase P; XAA-P 99.8 3.4E-21 1.2E-25 178.6 9.6 124 80-228 3-128 (131)
36 3ooo_A Proline dipeptidase; st 99.8 3.4E-19 1.2E-23 165.5 10.9 122 83-227 3-131 (132)
37 3i7m_A XAA-Pro dipeptidase; st 99.8 1.1E-19 3.8E-24 170.5 7.0 125 83-228 4-138 (140)
38 3o5v_A X-Pro dipeptidase; crea 99.8 4.6E-19 1.6E-23 164.6 9.3 122 83-227 3-131 (132)
39 3pn9_A Proline dipeptidase; st 99.8 8.4E-19 2.9E-23 163.8 9.2 125 82-228 4-135 (138)
40 3il0_A Aminopeptidase P; XAA-P 99.7 1.7E-16 5.7E-21 146.8 12.2 126 252-413 4-131 (131)
41 3q6d_A Proline dipeptidase; st 99.7 4.4E-15 1.5E-19 160.9 23.7 125 80-228 2-128 (356)
42 3qoc_A Putative metallopeptida 99.6 2.1E-15 7.1E-20 140.6 11.0 131 245-410 3-135 (135)
43 3biq_A FACT complex subunit SP 99.6 4.1E-14 1.4E-18 158.8 21.2 175 80-265 12-206 (467)
44 3pn9_A Proline dipeptidase; st 99.6 2.3E-15 8E-20 140.3 9.0 129 253-413 4-138 (138)
45 3ovk_A Aminopeptidase P, XAA-P 99.6 4.3E-14 1.5E-18 131.0 14.4 124 251-410 7-132 (132)
46 2zsg_A Aminopeptidase P, putat 99.5 1.2E-12 4.3E-17 141.6 24.1 123 83-228 2-131 (359)
47 4b6a_t Probable metalloproteas 99.5 1.2E-12 4E-17 146.3 18.4 178 406-586 34-271 (614)
48 3i7m_A XAA-Pro dipeptidase; st 99.4 4.3E-13 1.5E-17 125.4 9.1 126 255-411 5-139 (140)
49 3ooo_A Proline dipeptidase; st 99.4 6.2E-13 2.1E-17 123.0 10.0 124 254-410 3-132 (132)
50 1kp0_A Creatine amidinohydrola 99.4 3.2E-13 1.1E-17 148.5 9.3 160 79-264 22-185 (402)
51 3o5v_A X-Pro dipeptidase; crea 99.4 5E-13 1.7E-17 123.8 8.3 124 254-410 3-132 (132)
52 4ege_A Dipeptidase PEPE; struc 99.4 5.1E-11 1.8E-15 129.9 22.6 128 79-228 13-148 (378)
53 3ctz_A XAA-Pro aminopeptidase 99.3 3.9E-12 1.3E-16 147.2 8.1 157 253-443 7-189 (623)
54 4fkc_A XAA-Pro aminopeptidase; 99.2 7.9E-10 2.7E-14 120.4 24.8 133 77-228 11-148 (377)
55 1wy2_A XAA-Pro dipeptidase; st 99.1 2.9E-09 1E-13 114.8 21.8 119 82-228 5-125 (351)
56 1wn1_A Dipeptidase; prolidase, 98.9 4.8E-08 1.6E-12 105.5 21.5 119 83-228 1-129 (356)
57 4b28_A Metallopeptidase, famil 98.8 3.9E-09 1.3E-13 117.9 8.5 126 80-228 78-227 (470)
58 3cb6_A FACT complex subunit SP 98.8 6.8E-09 2.3E-13 115.5 9.8 144 80-228 12-175 (444)
59 1chm_A Creatine amidinohydrola 98.8 1.9E-08 6.5E-13 110.4 11.2 131 79-228 21-155 (401)
60 2v3z_A XAA-Pro aminopeptidase; 98.3 3.9E-05 1.3E-09 85.0 22.8 138 80-228 7-173 (440)
61 3ig4_A XAA-Pro aminopeptidase; 98.2 0.00014 4.8E-09 80.1 22.4 135 81-228 6-169 (427)
62 3fm3_A Methionine aminopeptida 95.3 0.036 1.2E-06 59.4 8.5 96 531-634 47-148 (358)
63 2iw2_A XAA-Pro dipeptidase; me 93.9 0.037 1.3E-06 61.9 4.5 71 79-151 22-103 (494)
64 4fuk_A Methionine aminopeptida 92.5 0.39 1.3E-05 50.8 9.6 97 530-634 70-171 (337)
65 3tb5_A Methionine aminopeptida 91.3 0.98 3.3E-05 45.7 10.7 95 532-634 13-112 (264)
66 1xgs_A Methionine aminopeptida 90.6 0.8 2.7E-05 47.4 9.4 95 530-634 4-100 (295)
67 2b3h_A Methionine aminopeptida 90.1 1.4 4.9E-05 46.3 10.9 95 532-634 84-183 (329)
68 3s6b_A Methionine aminopeptida 89.3 1.9 6.3E-05 46.1 11.1 96 532-635 112-212 (368)
69 1qxy_A Methionyl aminopeptidas 88.2 2.8 9.7E-05 41.8 11.2 92 532-634 12-111 (252)
70 2nw5_A Methionine aminopeptida 88.1 1.9 6.6E-05 45.8 10.3 95 531-634 49-150 (360)
71 3pka_A Methionine aminopeptida 87.6 3.1 0.0001 42.7 11.1 96 532-634 50-149 (285)
72 2q8k_A Proliferation-associate 87.6 0.81 2.8E-05 49.6 7.0 99 532-635 28-135 (401)
73 3mx6_A Methionine aminopeptida 86.8 3.8 0.00013 41.3 11.2 96 532-634 17-116 (262)
74 2gg2_A Methionine aminopeptida 85.9 3.7 0.00013 41.3 10.5 97 532-634 13-114 (263)
75 3tav_A Methionine aminopeptida 85.6 5.5 0.00019 40.7 11.8 97 531-634 42-143 (286)
76 1o0x_A Methionine aminopeptida 84.7 4.1 0.00014 41.1 10.2 96 532-634 25-125 (262)
77 4b6a_t Probable metalloproteas 83.4 2.4 8.1E-05 47.8 8.2 102 531-637 48-184 (614)
78 1b6a_A Methionine aminopeptida 81.5 2.2 7.7E-05 47.1 7.1 94 532-634 169-269 (478)
79 3rva_A Organophosphorus acid a 47.1 68 0.0023 34.9 9.9 93 531-635 167-263 (451)
80 3l24_A XAA-Pro dipeptidase; PI 33.9 79 0.0027 35.1 7.8 93 531-635 167-263 (517)
81 2k4j_A Putative transcriptiona 25.0 47 0.0016 28.7 3.2 57 196-268 42-98 (115)
82 2z9m_A Response regulator YYCF 24.4 46 0.0016 28.8 3.1 57 196-268 37-93 (120)
83 1gxq_A PHOB, phosphate regulon 24.1 68 0.0023 26.9 4.1 58 195-268 31-88 (106)
84 1opc_A OMPR, OMPRC; transcript 23.3 44 0.0015 28.3 2.7 58 195-268 31-88 (110)
85 3q9v_A DNA-binding response re 23.1 64 0.0022 28.6 3.8 59 195-269 60-118 (133)
86 3zq7_A KDP operon transcriptio 22.4 62 0.0021 26.9 3.4 56 196-267 29-84 (102)
87 3kmh_A D-lyxose isomerase; cup 21.1 62 0.0021 32.0 3.4 51 601-658 171-226 (246)
88 1ynf_A Succinylarginine dihydr 20.1 1.4E+02 0.0047 31.7 6.0 144 238-455 269-423 (458)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-125 Score=1095.99 Aligned_cols=598 Identities=48% Similarity=0.838 Sum_probs=550.0
Q ss_pred CCHHHHHHHHHHHhcCCCCC-----ccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHH
Q 005183 79 DAPDEKLRALRELFSRPGVN-----IDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQ 153 (710)
Q Consensus 79 ~~~~~Rl~~Lr~~m~~~~~~-----lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~q 153 (710)
+++.+||++||++|++ ++ +||||||+.|+||||||+++++|++||||||||+|++|||+++++|||||||++|
T Consensus 4 ~~~~~Rl~~LR~~m~~--~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSaG~~vVt~~~a~l~tDgRY~~Q 81 (623)
T 3ctz_A 4 KVTSELLRQLRQAMRN--SEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQ 81 (623)
T ss_dssp BCCHHHHHHHHHHTTC--TTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSCCEEEEESSCEEEEECGGGHHH
T ss_pred CCHHHHHHHHHHHHHh--cCCCCCceeEEEECCCCccccccccchhccceeccCcCCCceEEEEecCeeEEEECcHHHHH
Confidence 4557899999999999 99 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCC
Q 005183 154 AEKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRP 233 (710)
Q Consensus 154 A~~e~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp 233 (710)
|++|++.+|++++.+.++.+++.+||.+++..+++||||++++|++.+++|++.|++.+++|+++ ..|+||.+| +|||
T Consensus 82 A~~ql~~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~-~~~lvd~iw-~~Rp 159 (623)
T 3ctz_A 82 AAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPV-KENLVDKIW-TDRP 159 (623)
T ss_dssp HHHHBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEEC-SSCHHHHHC-TTCC
T ss_pred HHHhcCCceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHhcCCEEEec-CCCcHHHHh-hcCC
Confidence 99999767999998766788999999999988999999999999999999999998878899998 469999999 6999
Q ss_pred CCCCCccccccccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeC
Q 005183 234 KPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDD 313 (710)
Q Consensus 234 ~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~ 313 (710)
..|..|++.|+.+|+|+++.+|++++|+.|+++++|++||++++|++||+|++|++++|+|++++|++|+.++++||+|.
T Consensus 160 ~k~~~e~~~~~~~~ag~~~~~rl~~lr~~m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~ 239 (623)
T 3ctz_A 160 ERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDG 239 (623)
T ss_dssp CCCCCCCEECCHHHHSSCHHHHHHHHHHHHHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCS
T ss_pred CCCchhhhhcchhhcChhHHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCH-HHHhhhh-------cCCeEEeecccHHHHHHHHHhc---CCEEEEeCCCCcHHHHHHHHHHHHHHhhhcccccc
Q 005183 314 SKVTP-DVMDHLK-------NAGVELRPYNSILSEIKSLAAQ---GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKS 382 (710)
Q Consensus 314 ~k~~~-~~~~~l~-------~~~V~i~~y~~i~~~l~~l~~~---~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 382 (710)
.++.. ++.+++. ..++++++|.++.+.|+.+... .++|++|.. .++++++.|..
T Consensus 240 ~~~~~~~~~~~l~~~~~~p~~~~v~v~~y~~~~~~l~~l~~~~~~~~~i~id~~-~~~~l~~~l~~-------------- 304 (623)
T 3ctz_A 240 DRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREKVWVSDK-ASYAVSETIPK-------------- 304 (623)
T ss_dssp GGGGSHHHHHHTTTTSCCCGGGCEEEECGGGHHHHHHHHHHTCCTTCEEEEETT-SBHHHHHHSCG--------------
T ss_pred hhcCHHHHHHHHhhccccccCCceEEEEhHHHHHHHHHHHhcccCCeEEEECch-hhHHHHHhccc--------------
Confidence 76665 6777773 3468999999999999888642 379999987 55665555432
Q ss_pred ccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 005183 383 KTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR 462 (710)
Q Consensus 383 ~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~ 462 (710)
+.++++..+++..+|+|||++||+.||+|+++++.|+.++++|+++.+ .++|+||.|+++.++.++
T Consensus 305 -------------~~~~v~~~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i-~~~g~tE~el~~~l~~~~ 370 (623)
T 3ctz_A 305 -------------DHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEV-PKGGVTEISAADKAEEFR 370 (623)
T ss_dssp -------------GGEEEESSCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCCBHHHHHHHHHHHH
T ss_pred -------------cceEEecccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcHHHHHHHHHHHH
Confidence 124678889999999999999999999999999999999999998777 478999999999999877
Q ss_pred HhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHH
Q 005183 463 SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQG 542 (710)
Q Consensus 463 ~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a 542 (710)
.+..|+.+.+|++|+++|+|++++||.|++.++++|++||+|++|+|++|.||++|+|||+++|+|+++|+++|++|+++
T Consensus 371 ~~~~g~~~~sf~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a 450 (623)
T 3ctz_A 371 RQQADFVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKG 450 (623)
T ss_dssp HTSTTEEEESSCCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCcCCCCCceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHH
Confidence 65567778999999999999999999997555699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecC
Q 005183 543 HIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH 622 (710)
Q Consensus 543 ~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g 622 (710)
+++++++++|.|+++.+|+.++|+++|+.|++|.|++|||||+||++||+|..++.+.+++.+|+||||||+|||+|.+|
T Consensus 451 ~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g 530 (623)
T 3ctz_A 451 HIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDG 530 (623)
T ss_dssp HHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETT
T ss_pred HHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECC
Confidence 99999999988999999999999999999999999999999999999999976664323578899999999999999999
Q ss_pred cceEEEEEeEEEeecCCCCCCCCcccccceecccCCccccccccccCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHH
Q 005183 623 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDLSLLSAAEIDWLNNYHSQVWEKVSPLLDG----FARQ 698 (710)
Q Consensus 623 ~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~lI~~~ll~~~e~~~ln~yh~~v~~~~~p~l~~----~~~~ 698 (710)
.+||||||+|+||++++.+.||+.+|||||+||.+|+++++|+.+|||++|++|||+||++||++|+|+|++ ++++
T Consensus 531 ~~GiRiEd~vlVt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~ 610 (623)
T 3ctz_A 531 AFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALE 610 (623)
T ss_dssp TEEEECBEEEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ceEEEEeeEEEEecCCcccccccccccCCceeeeCCccHHHHHHHhCCHHHHHHHHHHHHHHHHHHhHhhCCCCcHHHHH
Confidence 999999999999999777889989999999999999999999999999999999999999999999999985 6899
Q ss_pred HHHHccccccC
Q 005183 699 WLWNNTRPVAK 709 (710)
Q Consensus 699 wl~~~t~~~~~ 709 (710)
||+++|+||.+
T Consensus 611 wl~~~t~~~~~ 621 (623)
T 3ctz_A 611 WLIRETQPISK 621 (623)
T ss_dssp HHHHTTCCC--
T ss_pred HHHHHhHhhcc
Confidence 99999999964
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=5.2e-67 Score=569.88 Aligned_cols=348 Identities=25% Similarity=0.382 Sum_probs=310.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCe
Q 005183 250 LDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGV 329 (710)
Q Consensus 250 ~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l~~~~V 329 (710)
+++.+|+++||+.|+++|+|++||++++|++|||||+|++ ++++|+.++++||+|. ++.+++..++. ++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~-r~~~~a~~~~~--~~ 69 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDF-RYVEQASKQAV--GY 69 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECG-GGHHHHHHHST--TS
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChhhceEccCCCCCC--------eEEEEECCCeEEEECh-hhHHHHHhhCC--CC
Confidence 4688999999999999999999999999999999999986 7899999999999994 55556666554 45
Q ss_pred EEeec-ccHHHHHHHHHh--cCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCcc
Q 005183 330 ELRPY-NSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 406 (710)
Q Consensus 330 ~i~~y-~~i~~~l~~l~~--~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i 406 (710)
++..| ++..+.+.++.. +.++||+|.+.+++..++.|++.+ ++ +++++++++
T Consensus 70 ~v~~~~~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~-~~~~~~~~~ 124 (356)
T 3q6d_A 70 EIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAI------------------------DA-EFIPTSGLV 124 (356)
T ss_dssp EEEECSSCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHC------------------------CS-EEEEECSHH
T ss_pred EEEEeCCCHHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhc------------------------cc-ceecchhhh
Confidence 55554 334444444332 368999999999999999998753 44 789999999
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccc
Q 005183 407 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAII 486 (710)
Q Consensus 407 ~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~ 486 (710)
..+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++..+. ..|+.+.+|++|+++|+|++++
T Consensus 125 ~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~e~~~~~~~~~~-~~g~~~~~f~~iv~~g~n~~~~ 197 (356)
T 3q6d_A 125 EKLRLIKTDSEIKILKEAAQIADAAFEHILSFI------RPGVSEIEVSNELEFFMR-KQGATSSSFDIIVASGLRSALP 197 (356)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTC------CTTCBHHHHHHHHHHHHH-HTTCSEESSCCEEEEGGGGGCT
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HCCCCcCCCCCEEEEcCccccC
Confidence 999999999999999999999999998877666 899999999999998754 5688888999999999999999
Q ss_pred cccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHH
Q 005183 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 566 (710)
Q Consensus 487 h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~ 566 (710)
||.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++.+++++++| |+++.+|+.++++
T Consensus 198 H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~~ 273 (356)
T 3q6d_A 198 HGVASE---KVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADALTRD 273 (356)
T ss_dssp TCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHH
T ss_pred CCCCCC---cccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHH
Confidence 999976 899999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCCCCCCC
Q 005183 567 SLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFG 644 (710)
Q Consensus 567 ~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~~~~~~ 644 (710)
++++.|+ +|.|++||||| +++||+|. ++ ++++.+|+|||||++|||+|.+|++||||||+|+||++
T Consensus 274 ~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~------- 341 (356)
T 3q6d_A 274 YITEKGYGEYFGHSTGHGIG--LEIHEAPG-LA--FRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSE------- 341 (356)
T ss_dssp HHHHTTCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSS-------
T ss_pred HHHHcCCcccCCCCCcccCC--CCcCcCCC-CC--CCCCCCcCCCCEEEECCEEEECCCCeEEEccEEEEeCC-------
Confidence 9999999 68999999999 99999996 54 34788999999999999999999999999999999999
Q ss_pred CcccccceecccCCccc
Q 005183 645 GVSYLGFEKLTFVPIQT 661 (710)
Q Consensus 645 ~~~~lg~E~LT~~P~~~ 661 (710)
|+|+||..|+++
T Consensus 342 -----G~e~Lt~~p~~l 353 (356)
T 3q6d_A 342 -----GNEVITKSPKEL 353 (356)
T ss_dssp -----SEEECCCSCCSC
T ss_pred -----cceeCCCCCcce
Confidence 999999999654
No 3
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=9.9e-66 Score=563.24 Aligned_cols=366 Identities=25% Similarity=0.329 Sum_probs=313.8
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCC-ceEEEEeCCCCC
Q 005183 239 PIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVT 317 (710)
Q Consensus 239 ~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~-~~~Lfvd~~k~~ 317 (710)
|++.|+..|+++++++|++++|+.|+++|+|++||++++|++|||||++++. .+| ++++|+.+ +++||++... .
T Consensus 2 ~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~-~r~---~~l~v~~~g~~~l~~~~~~-~ 76 (378)
T 4ege_A 2 PGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTF-ERL---TALVLPASGVPTIVLPRLE-L 76 (378)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCS-SSC---CEEEEESSSCCEEEEEGGG-G
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEECCcchhHHhhCCCCCCC-cce---EEEEEEeCCcEEEEEChhh-H
Confidence 8999999999999999999999999999999999999999999999998752 222 67888764 7899998532 2
Q ss_pred HHHHhh-hhcCCeEEeeccc---HHHHHHHHHhcC-CEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCC
Q 005183 318 PDVMDH-LKNAGVELRPYNS---ILSEIKSLAAQG-AQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 392 (710)
Q Consensus 318 ~~~~~~-l~~~~V~i~~y~~---i~~~l~~l~~~~-~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (710)
..+.+. +...++++.+|.+ ..+.+.++...+ ++||+| +.+++..+..|++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~---------------------- 133 (378)
T 4ege_A 77 ASLKESAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL---------------------- 133 (378)
T ss_dssp GGGGTSSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH----------------------
T ss_pred HHHHhcccCCCCeEEEEecCCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc----------------------
Confidence 233332 3334567777743 344555543333 689999 678999998888754
Q ss_pred CCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q 005183 393 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 472 (710)
Q Consensus 393 ~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~s 472 (710)
+.+++++++++..+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++..+. ..|..+.+
T Consensus 134 ---~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~~-~~G~~~~~ 203 (378)
T 4ege_A 134 ---GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFL------VPGRTEAQVAADIAEAIV-AEGHSAVA 203 (378)
T ss_dssp ---TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHH-HTTCSEEE
T ss_pred ---CCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HcCCCCCC
Confidence 35688999999999999999999999999999999999888777 899999999999998765 46777778
Q ss_pred CceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceee-CCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccC
Q 005183 473 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQY-VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIF 551 (710)
Q Consensus 473 f~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y-~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~ 551 (710)
| +|+++|+|++.+||.|++ ++|++||+|++|+|++| +||++|+|||+++|+|+++++++|+++++++.+++++++
T Consensus 204 f-~iv~sG~n~~~~H~~~~~---~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~ 279 (378)
T 4ege_A 204 F-VIVGSGPHGADPHHGYSD---RKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAVR 279 (378)
T ss_dssp E-EEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred e-eEEEeeCCCCccCCCCCC---CCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9 999999999999999976 89999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEE
Q 005183 552 PQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIE 629 (710)
Q Consensus 552 P~G~~~~~v~~~ar~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriE 629 (710)
| |+++++|+.++++++++.|+ +|.|++||||| +++||.|. +. ++++.+|+|||||++|||+|.+|.+|+|||
T Consensus 280 p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~-i~--~~~~~~L~~Gmv~tiEPgiy~~g~~gvriE 353 (378)
T 4ege_A 280 P-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPY-IV--AGNELPLVAGMAFSIEPGIYFPGRWGARIE 353 (378)
T ss_dssp T-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEE-EC--TTCCCBCCTTBEEEECCEEEETTTEEEECB
T ss_pred C-CCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCc-cC--CCCCCccCCCCEEEECCEEEeCCccEEEEe
Confidence 9 99999999999999999999 58999999999 99999997 43 347889999999999999999999999999
Q ss_pred EeEEEeecCCCCCCCCcccccceecccCCcccccc
Q 005183 630 NLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLV 664 (710)
Q Consensus 630 d~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~lI 664 (710)
|+|+||++ |+|+||..|+++-.|
T Consensus 354 d~v~Vt~~------------G~e~Lt~~p~~l~~~ 376 (378)
T 4ege_A 354 DIVVVTEN------------GALSVNNRPHELMVV 376 (378)
T ss_dssp EEEEEETT------------EEEESCCSCCSCEEE
T ss_pred eEEEEeCC------------cCeECCCCCCccEEc
Confidence 99999999 999999999765544
No 4
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=8.9e-65 Score=556.45 Aligned_cols=361 Identities=22% Similarity=0.307 Sum_probs=308.8
Q ss_pred ccccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCC-ceEEEEeCCCCCHHHH
Q 005183 243 HALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVM 321 (710)
Q Consensus 243 ~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~-~~~Lfvd~~k~~~~~~ 321 (710)
.+..|.-.||++|+++||+.|+++|+|++||++++|++|||||++.+...+| .+++++.+ ..+++++. ......
T Consensus 6 ~~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~---~~lvv~~~g~~~~~~~~--~~~~~~ 80 (377)
T 4fkc_A 6 HHHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERL---FVLILPSEGLLTAIAPR--LYEKEL 80 (377)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSC---CEEEEESSSCCEEEEEG--GGHHHH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHCCCCEEEECCChhheeecCCCCCCCCcce---EEEEEcCCCcEEEEecc--chHHHH
Confidence 4567888999999999999999999999999999999999999987655555 34666655 45555542 222333
Q ss_pred hhhhcCCeEEee----cccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCC
Q 005183 322 DHLKNAGVELRP----YNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGP 397 (710)
Q Consensus 322 ~~l~~~~V~i~~----y~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (710)
+.+....+.... +..+.+.|+++...++++++|. .+++..+..+++.+ ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d~-~~~~~~~~~l~~~~------------------------~~~ 135 (377)
T 4fkc_A 81 EEFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDD-TMPVGVFLKAKDIF------------------------DKY 135 (377)
T ss_dssp TTCSSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEECT-TSCHHHHHHTHHHH------------------------TTS
T ss_pred HhcCCCEEEeccccCHHHHHHHHHHHhhhccceeeeec-cccHHHHHHHHhhC------------------------CCC
Confidence 222211112211 2334455555555678999984 57888888888754 567
Q ss_pred cccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeE
Q 005183 398 AGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTIS 477 (710)
Q Consensus 398 ~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv 477 (710)
+++|+++++..+|+|||++||+.||+|+++++.++.++++++ ++|+||.|+++.++..+.++.|+.+.+|++|+
T Consensus 136 ~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~~G~tE~el~~~~~~~~~~~~g~~~~~f~~iv 209 (377)
T 4fkc_A 136 SLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGK------LEGKSERELANRIEYMIKNEFGADDVSFEPIV 209 (377)
T ss_dssp EEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHTSTTCCEESSCCEE
T ss_pred eEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhcc------CCCccHHHHHHHHhhhhhhccCCCCcccCccc
Confidence 889999999999999999999999999999999999888776 89999999999998876666688889999999
Q ss_pred eeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCh
Q 005183 478 GSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPG 557 (710)
Q Consensus 478 ~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~ 557 (710)
++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++++++| |+++
T Consensus 210 ~~G~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~ 285 (377)
T 4fkc_A 210 ASGPNGANPHHRPSH---RKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAE-GIPA 285 (377)
T ss_dssp EEGGGGGCTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBT-TCBH
T ss_pred ccccccccccccccc---ccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcC-Ccch
Confidence 999999999999976 899999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 558 FVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 558 ~~v~~~ar~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
.+++.++++++++.|+ +|.|++||||| +++||.|. ++ ++++.+|+|||||+||||+|.+|.+||||||+|+||
T Consensus 286 ~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~-i~--~~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~Vt 360 (377)
T 4fkc_A 286 EVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPY-IS--PGNKKILKDGMVFTIEPGIYLQGKFGVRIEDDVALV 360 (377)
T ss_dssp HHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEE-EC--SSCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred hhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCc-cc--CCCCCEeCCCCEEEECCeeEECCccEEEEccEEEEE
Confidence 9999999999999999 58999999999 99999997 54 457889999999999999999999999999999999
Q ss_pred ecCCCCCCCCcccccceecccCCcc
Q 005183 636 EVGTPNRFGGVSYLGFEKLTFVPIQ 660 (710)
Q Consensus 636 e~~~~~~~~~~~~lg~E~LT~~P~~ 660 (710)
++ |+|+||..|++
T Consensus 361 ~~------------g~e~Lt~~p~e 373 (377)
T 4fkc_A 361 DK------------KGIRLTNADRE 373 (377)
T ss_dssp TT------------EEEESCCSCCS
T ss_pred CC------------CcEECCCCCCC
Confidence 99 99999999954
No 5
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=8.3e-64 Score=545.15 Aligned_cols=344 Identities=28% Similarity=0.394 Sum_probs=305.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchh-----hhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhhhcCC
Q 005183 254 SKLSSLRSDLVDAGSSAIVISMLDEI-----AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAG 328 (710)
Q Consensus 254 ~Kl~~lr~~L~e~glDallis~~dnI-----aYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l~~~~ 328 (710)
+|+++||+.|+++++|++|+++++|+ +|||||++++ ++++|+.++++||+|.. +..++... .+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~r-~~~~a~~~---~~ 69 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDSR-YTVQAKQE---TD 69 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECTT-THHHHHHH---CC
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHcccccCeeEeccCCCC--------EEEEEECCCCEEEECcc-cHHHHHhC---CC
Confidence 48999999999999999999999999 9999999876 89999999999999954 44444444 25
Q ss_pred eEEeec-cc-HHHHHHHHHh--cCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCC
Q 005183 329 VELRPY-NS-ILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTS 404 (710)
Q Consensus 329 V~i~~y-~~-i~~~l~~l~~--~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 404 (710)
+++..| .+ ..+.+.++.. +.++||+|.+.+++..++.|++.+ ++.+++++++
T Consensus 70 ~~v~~~~~~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l------------------------~~~~~v~~~~ 125 (359)
T 2zsg_A 70 FEVREVKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAF------------------------GDRKFIGIDD 125 (359)
T ss_dssp SEEEEC---CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHT------------------------TTCEEEECHH
T ss_pred CEEEEecCcchHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhC------------------------CCcEEEEChh
Confidence 677777 32 3344444432 357999999889999998887643 2356888899
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCc
Q 005183 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGA 484 (710)
Q Consensus 405 ~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a 484 (710)
++..+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++..+. ..|+.+.+|++|+++|+|++
T Consensus 126 ~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~------~~G~te~e~~~~~~~~~~-~~g~~~~~f~~iv~~g~~~~ 198 (359)
T 2zsg_A 126 EVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQI------RAGMTEKEIAALLEYTMR-KEGAEGVAFDTIVASGCRSA 198 (359)
T ss_dssp HHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTC------CTTCBHHHHHHHHHHHHH-HTTCSEESSCCEEEEGGGGG
T ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HcCCCCCCCCCEEEEccccc
Confidence 99999999999999999999999999999888776 899999999999998754 56777889999999999999
Q ss_pred cccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHH
Q 005183 485 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 564 (710)
Q Consensus 485 ~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~a 564 (710)
++||.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++.+++++++| |+++.+|+.++
T Consensus 199 ~~h~~~~~---~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~v~~~~ 274 (359)
T 2zsg_A 199 LPHGKASD---KVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKLLDSVA 274 (359)
T ss_dssp STTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred cccCCCCC---cccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHH
Confidence 99999876 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCCCCC
Q 005183 565 RSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNR 642 (710)
Q Consensus 565 r~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~~~~ 642 (710)
++.+++.|+ +|.|++||||| +++||.|. ++. +++.+|+|||||++|||+|.+|++|+||||+|+||++
T Consensus 275 ~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~--~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~----- 344 (359)
T 2zsg_A 275 REFIREKGYGEFFGHSLGHGIG--LEVHEGPA-ISF--RNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQ----- 344 (359)
T ss_dssp HHHHHHTTCGGGBCSCSEEECS--SSSSEEEE-EST--TCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETT-----
T ss_pred HHHHHHcCCcccCCCCCccccC--cccCCCCC-cCC--CCCCCcCCCCEEEECCEEEECCCcEEEEeeEEEEcCC-----
Confidence 999999999 68999999999 99999995 653 4778999999999999999999999999999999999
Q ss_pred CCCcccccceecccCCccc
Q 005183 643 FGGVSYLGFEKLTFVPIQT 661 (710)
Q Consensus 643 ~~~~~~lg~E~LT~~P~~~ 661 (710)
|+|+||.+|++.
T Consensus 345 -------g~e~Lt~~~~~l 356 (359)
T 2zsg_A 345 -------GCEILTTLPRSI 356 (359)
T ss_dssp -------EEEECCCSCCSC
T ss_pred -------cceECCCCCccc
Confidence 999999999764
No 6
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=3.1e-63 Score=539.75 Aligned_cols=344 Identities=23% Similarity=0.248 Sum_probs=298.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCc-eEEEEeCCCCCHHHHhhhhcCCeEEe
Q 005183 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDR-AKLFVDDSKVTPDVMDHLKNAGVELR 332 (710)
Q Consensus 254 ~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~-~~Lfvd~~k~~~~~~~~l~~~~V~i~ 332 (710)
+|++++|+.|+++|+|++|+++++|++||||+++. +++.+ .++++|+.++ ++||++..+.. .+.. +++.
T Consensus 1 ~R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~-~~~~------~~v~ 70 (356)
T 1wn1_A 1 MRLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYEN-VVNN------FPAT 70 (356)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTT-TTTT------SCEE
T ss_pred CHHHHHHHHHHHCCCcEEEECCCccceeecCCcCC-CCCCc--eEEEEEeCCCcEEEEECcccHH-HhhC------CeEE
Confidence 38999999999999999999999999999999874 44444 3788888765 99999865433 2211 3344
Q ss_pred ecc-------cHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCc
Q 005183 333 PYN-------SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSP 405 (710)
Q Consensus 333 ~y~-------~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 405 (710)
+|. .+.+.|+++..+.++||+| +.++...++.|++. ++.++++++++
T Consensus 71 ~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~-------------------------~~~~~~~~~~~ 124 (356)
T 1wn1_A 71 FWHDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL-------------------------GKFTFQPLSSL 124 (356)
T ss_dssp EECTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG-------------------------SCEEEEETHHH
T ss_pred EEcCCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC-------------------------CCCeEEEcHHH
Confidence 442 2333333332245689999 77888888777541 24567899999
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCcc
Q 005183 406 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAI 485 (710)
Q Consensus 406 i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~ 485 (710)
+..+|++||++||+.||+|+++++.++.++++++ ++|+||.|+++.++..+.+. +.+.+|++|+++|+|+++
T Consensus 125 i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~~ 196 (356)
T 1wn1_A 125 IKELRMIKDKEEVKMMEHASRIADKVFEEILTWD------LIGMKERELALKIELLIREL--SDGIAFEPIVASGENAAN 196 (356)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGGC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHh--CcCCCCCcEEEEeccccc
Confidence 9999999999999999999999999999988777 89999999999999877655 567899999999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005183 486 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (710)
Q Consensus 486 ~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar 565 (710)
+||.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++.+++++++| |+++.+|+.+++
T Consensus 197 ~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~ 272 (356)
T 1wn1_A 197 PHHEPGE---RKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVRE-GIKAKDVDSRAR 272 (356)
T ss_dssp TTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBHHHHHHHHH
T ss_pred ccCCCCC---CeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHH
Confidence 9999976 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCCCCCC
Q 005183 566 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 643 (710)
Q Consensus 566 ~~l~~~G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~~~~~ 643 (710)
+.+++.|+ +|.|++||||| +++||.|. ++ ++++.+|+|||||++|||+|.+|.+|+|+||+|+||++
T Consensus 273 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~------ 341 (356)
T 1wn1_A 273 EVISKAGYGEYFIHRTGHGLG--LDVHEEPY-IG--PDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG------ 341 (356)
T ss_dssp HHHHTTTCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT------
T ss_pred HHHHHcCCcccCCCCCcccCC--CccCCCcc-cC--CCCCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEeCC------
Confidence 99999999 68999999999 99999997 54 34788999999999999999999999999999999999
Q ss_pred CCcccccceecccCCcccc
Q 005183 644 GGVSYLGFEKLTFVPIQTK 662 (710)
Q Consensus 644 ~~~~~lg~E~LT~~P~~~~ 662 (710)
|+|+||.+|++..
T Consensus 342 ------g~e~Lt~~p~~l~ 354 (356)
T 1wn1_A 342 ------KGRRLTKAERELI 354 (356)
T ss_dssp ------EEEESCCCCCSCC
T ss_pred ------ccEECCCCCCcce
Confidence 9999999997654
No 7
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=1.5e-62 Score=533.41 Aligned_cols=341 Identities=22% Similarity=0.268 Sum_probs=300.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEE-EEEeCCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 005183 253 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAY-LIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 331 (710)
Q Consensus 253 ~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~-liV~~~~~~Lfvd~~k~~~~~~~~l~~~~V~i 331 (710)
.+|++++|+.|+++|+|++|+++++|++|||||++.+ .+| ++|+.++..+|++... +++ ... .++++
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~~--~~~-~~~--~~~~v 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELEY--EMA-KEE--SNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHHH--HHH-HHH--CSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCceEecCCCCCC-------CcEEEEEECCCcEEEECchH--HHH-hhc--CCCeE
Confidence 5799999999999999999999999999999998765 136 7888888899998543 344 222 24566
Q ss_pred eecccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCccccccc
Q 005183 332 RPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKA 411 (710)
Q Consensus 332 ~~y~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRa 411 (710)
..|+.+ +.+.++..+.++||+| +.+++..++.|++.+ +..+++++++++..+|+
T Consensus 73 ~~~~~~-~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~------------------------~~~~~~~~~~~i~~~r~ 126 (351)
T 1wy2_A 73 EKFKKM-DEFYKALEGIKSLGIE-SSLPYGFIEELKKKA------------------------NIKEFKKVDDVIRDMRI 126 (351)
T ss_dssp EEESSH-HHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHS------------------------CCCEEEECHHHHHHHHT
T ss_pred EEeCcH-HHHHHHHccCCEEEEc-CcCCHHHHHHHHhhC------------------------CCCeEEEcHHHHHHHHh
Confidence 666553 3444443356799999 889999999887642 33478899999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCC
Q 005183 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE 491 (710)
Q Consensus 412 vKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~ 491 (710)
+||++||+.||+|+++++.++..+++++ ++|+||.|+++.++..+. ..|+.+.+|++|+++|+|++++||.|+
T Consensus 127 iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~-~~g~~~~~f~~iv~~g~n~~~~H~~~~ 199 (351)
T 1wy2_A 127 IKSEKEIKIIEKACEIADKAVMAAIEEI------TEGKKEREVAAKVEYLMK-MNGAEKPAFDTIIASGYRSALPHGVAS 199 (351)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHH-HTTCSEESSCCEEEEGGGGGSTTCBCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCCCCCCCCCEEEEccccccccCCCC
Confidence 9999999999999999999999888776 899999999999998764 567778899999999999999999997
Q ss_pred CCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc
Q 005183 492 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 571 (710)
Q Consensus 492 ~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~ 571 (710)
+ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+++++++.+++++++| |+++.+|+.++++++++.
T Consensus 200 ~---~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~ 275 (351)
T 1wy2_A 200 D---KRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNIIAEY 275 (351)
T ss_dssp S---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHT
T ss_pred C---cccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 6 899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CC--CCcCccccccccCCccccCCCcccccCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeecCCCCCCCCcccc
Q 005183 572 GL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYL 649 (710)
Q Consensus 572 G~--~~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~~~~~~~~~~~~l 649 (710)
|+ +|.|++||||| +++||+|. ++ ++++.+|+|||||++|||+|.+|.+|+|+||+|+|| +
T Consensus 276 g~~~~~~h~~GHgiG--l~~hE~p~-i~--~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~------------ 337 (351)
T 1wy2_A 276 GYGEYFNHSLGHGVG--LEVHEWPR-VS--QYDETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-K------------ 337 (351)
T ss_dssp TCGGGCCSCSEEECS--SSSSEEEE-ES--TTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-T------------
T ss_pred CCcccCCCCcccccC--CCcCCCCc-cC--CCCCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEEC-C------------
Confidence 98 58999999999 99999996 54 347889999999999999999999999999999999 9
Q ss_pred cce-ecccCCcc
Q 005183 650 GFE-KLTFVPIQ 660 (710)
Q Consensus 650 g~E-~LT~~P~~ 660 (710)
|+| +||.+|++
T Consensus 338 G~e~~Lt~~p~~ 349 (351)
T 1wy2_A 338 NGSKRLTKTERE 349 (351)
T ss_dssp TEEEESCCSCSC
T ss_pred CceecCCCCCcc
Confidence 999 99999865
No 8
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=2.6e-61 Score=533.39 Aligned_cols=366 Identities=16% Similarity=0.122 Sum_probs=312.5
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhh
Q 005183 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHL 324 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l 324 (710)
..|+.+++.+|+++||+.|+++++|++||++++|++|||||++++. .+| ++++|+.+++.||+|..+... +...+
T Consensus 17 ~~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~~-a~~~~ 91 (402)
T 1kp0_A 17 TPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGM-PWRRS 91 (402)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTH-HHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCceEecCCCCCCC-Cce---EEEEEeCCCCEEEeccchhhh-hHHhc
Confidence 4578899999999999999999999999999999999999998653 345 788999889999999665543 32233
Q ss_pred hcCCeEEeec--ccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCccccc
Q 005183 325 KNAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFR 402 (710)
Q Consensus 325 ~~~~V~i~~y--~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~ 402 (710)
....+.+.++ ....+.|.++..++++||+|.+.+++..++.|++.+ ++.++++.
T Consensus 92 ~~~~v~~~~~~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l------------------------~~~~~v~~ 147 (402)
T 1kp0_A 92 FGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKAL------------------------PGTEFVDV 147 (402)
T ss_dssp SSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHS------------------------TTCEEEEC
T ss_pred cCcceEeccccccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhC------------------------CCCEEEEC
Confidence 2223444444 234566666654578999999999999998887643 35678899
Q ss_pred CCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhC--CC-CCC--CCceeE
Q 005183 403 TSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS--GF-LDT--SFDTIS 477 (710)
Q Consensus 403 ~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~--g~-~~~--sf~~iv 477 (710)
.+++..+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.+++.+.+.. ++ ... .+.+|+
T Consensus 148 ~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv 221 (402)
T 1kp0_A 148 GZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAI------SAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWF 221 (402)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHhcccccCcccccCcccee
Confidence 9999999999999999999999999999999888777 899999999999987654431 11 111 234589
Q ss_pred eeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCh
Q 005183 478 GSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPG 557 (710)
Q Consensus 478 ~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~ 557 (710)
++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|++|++++.+++++++| |+++
T Consensus 222 ~~g~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~ 297 (402)
T 1kp0_A 222 QSGINTDGAHNPVTB---RVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKP-GARC 297 (402)
T ss_dssp EEGGGGGSTTCCEEC---CBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBH
T ss_pred ecccccccccCCCCC---cccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcH
Confidence 999999999999875 899999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCcccc--cCCCCccccCCCEEEECceeeec----CcceEEEE
Q 005183 558 FVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYYED----HAFGIRIE 629 (710)
Q Consensus 558 ~~v~~~ar~~l~~~G~~--~~h~~GHGIG~~l~vhE~P~~i~~--~~~~~~~L~~GMV~siEPgiy~~----g~~GiriE 629 (710)
.+|+.++++.+++.|+. +.|++||||| +++||.|..++. .++++.+|+|||||++|||+|.+ |.+|+|+|
T Consensus 298 ~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~G~rie 375 (402)
T 1kp0_A 298 KDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGYREH 375 (402)
T ss_dssp HHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEEECB
T ss_pred HHHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCCCCcEEEE
Confidence 99999999999999995 8899999999 999998865432 23467899999999999999999 88999999
Q ss_pred EeEEEeecCCCCCCCCcccccceecccCCccccc
Q 005183 630 NLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKL 663 (710)
Q Consensus 630 d~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~l 663 (710)
|+|+||++ |+|+||.+|+++++
T Consensus 376 d~v~Vt~~------------g~e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 376 DILVIKEN------------BTENITGFPFGPEH 397 (402)
T ss_dssp EEEEEETT------------EEEECCCSCCSTTT
T ss_pred EEEEEcCC------------cceECCCCCCchHH
Confidence 99999999 99999999988765
No 9
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=2.6e-61 Score=543.39 Aligned_cols=383 Identities=13% Similarity=0.147 Sum_probs=317.6
Q ss_pred ccccchhHHHHHHHHHHHHH--HcCCCEEEEcccc----hh--------hhhcCCCCCCCCCCceeEEEEEEeCCceEEE
Q 005183 245 LKYAGLDVASKLSSLRSDLV--DAGSSAIVISMLD----EI--------AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 310 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~--e~glDallis~~d----nI--------aYLtg~rg~di~~~Pv~~a~liV~~~~~~Lf 310 (710)
..++++++.+|+++||+.|+ ++|+|++||++++ |+ +|||||++.+ ++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~--------~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPA--------TLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSS--------EEEEEETTEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCCCCccchhhhhHhhCCCCCC--------EEEEEECCeEEEE
Confidence 46899999999999999999 9999999999998 99 6999998743 8999999999999
Q ss_pred EeCCC--CCHHHHh--hhh--cCCeEEeec--c------cHHHHHHHHHhc-CCEEEEe-CCCCcHHHHHHHHHHHHHHh
Q 005183 311 VDDSK--VTPDVMD--HLK--NAGVELRPY--N------SILSEIKSLAAQ-GAQLWLD-PSSVNAAIMNTYEIAIEKYL 374 (710)
Q Consensus 311 vd~~k--~~~~~~~--~l~--~~~V~i~~y--~------~i~~~l~~l~~~-~~~i~ld-~~~~~~~~~~~L~~~~~~~~ 374 (710)
+|..+ +..++.+ ++. ..++++..| . ...+.|.++... +++||++ .+.++...++.|.+.+....
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~ 157 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAV 157 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHH
T ss_pred ECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhc
Confidence 99643 2234444 232 114666666 2 233445444322 6799995 56778888888877542100
Q ss_pred hhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 005183 375 TSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDV 454 (710)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~el 454 (710)
+ .++.+++++.+++..+|+|||++||+.||+|+++++.++..++++++..+..+.|+||.|+
T Consensus 158 ~------------------~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el 219 (467)
T 3biq_A 158 K------------------ENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKL 219 (467)
T ss_dssp H------------------HHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHH
T ss_pred c------------------cCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHH
Confidence 0 0145688889999999999999999999999999999999999999766633348999999
Q ss_pred HHHHHHHHHhh----CC-------------C----CCCCCceeEeeCCCCc-cccccCCCCCCcccCCCCeEEEecceee
Q 005183 455 ADKLLEFRSKQ----SG-------------F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQY 512 (710)
Q Consensus 455 a~~l~~~~~~~----~g-------------~----~~~sf~~iv~sG~n~a-~~h~~p~~~~~~~l~~gd~vliD~g~~y 512 (710)
++.++.++.+. .| + .+.+|++|+++|+|++ ++||.|++ ++|++||+|++|+|++|
T Consensus 220 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~---~~l~~gd~v~iD~g~~~ 296 (467)
T 3biq_A 220 SDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTN---DQLYGNGCILASCGIRY 296 (467)
T ss_dssp HHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCCCSEEEEEEECEEE
T ss_pred HHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCCC---CccCCCCEEEEEEeEEE
Confidence 99999865430 22 2 3578999999999999 99999976 89999999999999999
Q ss_pred CCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHc-cCCCCCChHHHHHHHHHHHHHcC--C--CCcCccccccccCC
Q 005183 513 VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQA-IFPQSTPGFVLDAFARSSLWKIG--L--DYRHGTGHGVGAAL 587 (710)
Q Consensus 513 ~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~-i~P~G~~~~~v~~~ar~~l~~~G--~--~~~h~~GHGIG~~l 587 (710)
.||++|+||||++| |+++|+++|++|++++.+++++ ++| |+++.+|+.++++++++.| + +|.|++||||| +
T Consensus 297 ~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiG--l 372 (467)
T 3biq_A 297 NNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIG--L 372 (467)
T ss_dssp TTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--S
T ss_pred CCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcC-CCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccc--c
Confidence 99999999999999 9999999999999999999999 999 9999999999999999997 4 58999999999 9
Q ss_pred ccccCCCcccccCCC-CccccCCCEEEECceee-e-----cCcceEEEEEeEEEe--ecCCCCCCCCcccccceecc-cC
Q 005183 588 NVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYY-E-----DHAFGIRIENLLYVK--EVGTPNRFGGVSYLGFEKLT-FV 657 (710)
Q Consensus 588 ~vhE~P~~i~~~~~~-~~~L~~GMV~siEPgiy-~-----~g~~GiriEd~v~Vt--e~~~~~~~~~~~~lg~E~LT-~~ 657 (710)
++||.|..++. ++ +.+|++||||+||||+| . +|.+||||||+|+|| ++ |+|+|| .+
T Consensus 373 ~~hE~p~~~~~--~~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~------------G~e~Lt~~~ 438 (467)
T 3biq_A 373 EFRDSNFILNV--KNDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDET------------EPPRFLTNY 438 (467)
T ss_dssp SSCCGGGBSST--TCCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTT------------SCCEESCCS
T ss_pred ccccCCccCCC--CCCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEecCCC------------CcEEecccC
Confidence 99999965653 36 88999999999999999 7 889999999999999 87 999999 99
Q ss_pred CccccccccccCCHHHH
Q 005183 658 PIQTKLVDLSLLSAAEI 674 (710)
Q Consensus 658 P~~~~lI~~~ll~~~e~ 674 (710)
|+++.+|+..|++++|-
T Consensus 439 p~~~~~i~~~~~~~~e~ 455 (467)
T 3biq_A 439 TKAKSQISFYFNNEEED 455 (467)
T ss_dssp CCCHHHHEECC------
T ss_pred CCCHHHHHHHHhccccc
Confidence 99999999999998883
No 10
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=1.3e-60 Score=534.07 Aligned_cols=362 Identities=18% Similarity=0.143 Sum_probs=301.4
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCC--CCCCceeEEEEEEeCCceEEEEeCCCCCHHHHh
Q 005183 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSD--VPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 322 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~d--i~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~ 322 (710)
.++...++++|+++||+.|+++|+|++||++++|++|||||+|.+ .+++|. ++++|+.++..+|+|... ...+..
T Consensus 72 ~p~~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r~-~~~l~~ 148 (470)
T 4b28_A 72 LPDLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYKN-SPFLSE 148 (470)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCTT-CGGGGT
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCEEEEcCCCcceeecCCCCCcccccCCCC--EEEEEECCCCEEEEecch-hhhhhh
Confidence 345578899999999999999999999999999999999999865 344553 689999888888888442 211111
Q ss_pred hhhcCCeEEee--------------------cccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhcccccc
Q 005183 323 HLKNAGVELRP--------------------YNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKS 382 (710)
Q Consensus 323 ~l~~~~V~i~~--------------------y~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 382 (710)
..... -++++ ++.+.+.|+++....++||+|.. ++..++.|++
T Consensus 149 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~-------------- 211 (470)
T 4b28_A 149 FNPLV-REQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA-------------- 211 (470)
T ss_dssp TCTTS-CEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH--------------
T ss_pred hhhHH-HHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHc--------------
Confidence 11100 01221 11233444444334689999975 4566766654
Q ss_pred ccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CHHHHHHH
Q 005183 383 KTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKL-----TEVDVADK 457 (710)
Q Consensus 383 ~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~-----tE~ela~~ 457 (710)
++.+++++++++..+|+|||++||+.||+|+++++.++.++++++ ++|+ ||.|+++.
T Consensus 212 ------------~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~~~~~~tE~el~~~ 273 (470)
T 4b28_A 212 ------------QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFA------RSKVGDGVTCENDIWAI 273 (470)
T ss_dssp ------------TTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTTSSCCBHHHHHHH
T ss_pred ------------CCCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCHHHHHHH
Confidence 357789999999999999999999999999999999999999888 6777 99999999
Q ss_pred HHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEeccee-eCCeEeeeEeeeeCC--CCCHHHHH
Q 005183 458 LLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQ-YVDGTTDITRTVHFG--EPTAREKE 534 (710)
Q Consensus 458 l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~-y~gy~tDitRT~~~G--~pt~e~~~ 534 (710)
++....+ .|.. .+|.+|+++|+|++.+||.|++ ++|++||+|++|+|++ |.||++|+||||++| +|+++|++
T Consensus 274 l~~~~~~-~G~~-~~~~~ivasG~n~~~~H~~~~~---~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~ 348 (470)
T 4b28_A 274 LHSENVR-RGGE-WIETRLLASGPRSNPWFQECGP---RVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIY 348 (470)
T ss_dssp HHHHHHT-TTCC-EESCCCEEEGGGGSSTTCCCCS---CBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHH
T ss_pred HHHHHHH-cCCC-cCCCceeEEcCccccCCCCCCC---ccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHH
Confidence 9986544 4543 4678999999999999999865 8999999999999998 899999999999999 69999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCcCccccccccCCccccCCCccccc-----CCCCccccCC
Q 005183 535 CFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFR-----YGNMTPLVEG 609 (710)
Q Consensus 535 ~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~h~~GHGIG~~l~vhE~P~~i~~~-----~~~~~~L~~G 609 (710)
+|++|++++.+++++++| |+++.+|+.++++++++.|..+.|++||||| + +||.|. |+.. ++++.+|+||
T Consensus 349 ~y~~v~~a~~a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~-i~~~~~~~~~~~~~~L~~G 423 (470)
T 4b28_A 349 AMQHGVEHIRTNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPL-VAYPDHAVAGAYDYPLEPG 423 (470)
T ss_dssp HHHHHHHHHHHHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEE-ECCTTTCCTTSSCCBCCTT
T ss_pred HHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHhhhcCCCCccCCCC--c-CCCCCc-ccCccccccCCCCCEECCC
Confidence 999999999999999999 9999999999999999988877799999999 8 699996 6532 2467899999
Q ss_pred CEEEECceeee-cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCcccccccc
Q 005183 610 MIVSNEPGYYE-DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDL 666 (710)
Q Consensus 610 MV~siEPgiy~-~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~lI~~ 666 (710)
|||+||||+|. +|.+||||||+|+||++ |+|+||.+|+++.+|.+
T Consensus 424 MV~tiEPgiy~~~g~~GvriEd~vlVte~------------G~e~LT~~p~~l~li~~ 469 (470)
T 4b28_A 424 MTLCVEALISEEGGDFSIKLEDQVLITED------------GYENLTKYPFDPALMGV 469 (470)
T ss_dssp CEEEEEEEEECTTCSCEEEEEEEEEECSS------------SEEECCCCCCCHHHHC-
T ss_pred CEEEEcCeeecCCCcEEEEEeeEEEEeCC------------cCeECCCCCCcHHhccC
Confidence 99999999998 89999999999999999 99999999999888754
No 11
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=1e-59 Score=527.18 Aligned_cols=372 Identities=14% Similarity=0.169 Sum_probs=307.9
Q ss_pred ccccchhHHHHHHHHHHHHHH--------cCCCEEEEcccc----h--------hhhhcCCCCCCCCCCceeEEEEEEeC
Q 005183 245 LKYAGLDVASKLSSLRSDLVD--------AGSSAIVISMLD----E--------IAWLLNLRGSDVPHSPVMYAYLIVEM 304 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~e--------~glDallis~~d----n--------IaYLtg~rg~di~~~Pv~~a~liV~~ 304 (710)
..|+++++.+|+++||+.|++ +++|++||++++ + ++|||||++.+ ++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~--------~~lvi~~ 77 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPS--------TLILLEK 77 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSS--------EEEEEET
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcccchhhhHHHhCCCCCC--------EEEEEeC
Confidence 568999999999999999998 999999999986 6 89999998866 7899999
Q ss_pred CceEEEEeCCC--CCHHHH-hhhhcCCeEEeec-cc-------HHHHHHHHHhcCCEEEEeC-CCCcHHHHHHHHHHHHH
Q 005183 305 DRAKLFVDDSK--VTPDVM-DHLKNAGVELRPY-NS-------ILSEIKSLAAQGAQLWLDP-SSVNAAIMNTYEIAIEK 372 (710)
Q Consensus 305 ~~~~Lfvd~~k--~~~~~~-~~l~~~~V~i~~y-~~-------i~~~l~~l~~~~~~i~ld~-~~~~~~~~~~L~~~~~~ 372 (710)
++++||+|..+ +...+. ..+....+++..| .+ +...+..+...+++||++. +..+...+..+...+..
T Consensus 78 ~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~ 157 (444)
T 3cb6_A 78 HRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEP 157 (444)
T ss_dssp TEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTT
T ss_pred CcEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhh
Confidence 99999998543 334444 3332223555555 21 2222222322357899986 55666666665543310
Q ss_pred HhhhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCC--C
Q 005183 373 YLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALA-QFWVWLEEEIHNGAK--L 449 (710)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~-~~~~~l~~~i~~~~g--~ 449 (710)
. .++.+++++++++..+|+|||++||+.||+|+++++.++. .++.++.+.+ ++| +
T Consensus 158 ~--------------------~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i--~~G~~~ 215 (444)
T 3cb6_A 158 V--------------------KSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYI--DQGKKI 215 (444)
T ss_dssp T--------------------GGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH--HHTCCC
T ss_pred c--------------------cCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccc
Confidence 0 0235688999999999999999999999999999999999 7887887777 677 9
Q ss_pred CHHHHHHHHHHHHHhh-------CC---C----CCCCCceeEeeCCCCc-cccccCCCCCCcccCCCCeEEEecceeeCC
Q 005183 450 TEVDVADKLLEFRSKQ-------SG---F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQYVD 514 (710)
Q Consensus 450 tE~ela~~l~~~~~~~-------~g---~----~~~sf~~iv~sG~n~a-~~h~~p~~~~~~~l~~gd~vliD~g~~y~g 514 (710)
||.|+++.++..+.+. .| + .+.+|++|+++|+|++ ++||.|++ ++|+ ||+|++|+|++|+|
T Consensus 216 te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~---~~l~-gd~v~iD~g~~~~g 291 (444)
T 3cb6_A 216 THSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDD---RNLH-GDVVLCSLGFRYKS 291 (444)
T ss_dssp BHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCC-SSEEEEEECEEETT
T ss_pred CHHHHHHHHHHHHHHhccccccccccccccccccccccCceEeccCCcCceeccCCCC---Cccc-CCEEEEEEeEeeCC
Confidence 9999999998764321 12 2 2578999999999999 99999876 8898 99999999999999
Q ss_pred eEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc--CC--CCcCccccccccCCccc
Q 005183 515 GTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI--GL--DYRHGTGHGVGAALNVH 590 (710)
Q Consensus 515 y~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~--G~--~~~h~~GHGIG~~l~vh 590 (710)
|++|+||||++| |+++|+++|++|++++.+++++++| |+++.+|+.++++++++. |+ +|.|++||||| +++|
T Consensus 292 y~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~h 367 (444)
T 3cb6_A 292 YCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIG--IEFR 367 (444)
T ss_dssp EECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSC
T ss_pred EeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHhhhhhhHhhcccccccccC--cccc
Confidence 999999999998 8999999999999999999999999 999999999999999998 45 48999999999 9999
Q ss_pred cCCCcccccCCCCccccCCCEEEECceee-e---------cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCcc
Q 005183 591 EGPQSISFRYGNMTPLVEGMIVSNEPGYY-E---------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (710)
Q Consensus 591 E~P~~i~~~~~~~~~L~~GMV~siEPgiy-~---------~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~ 660 (710)
|.|..++ ++++.+|+||||||||||+| . +|.+||||||+|+||++ |+|+||.+|++
T Consensus 368 e~p~~~~--~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~------------g~e~Lt~~p~~ 433 (444)
T 3cb6_A 368 ESSLLVN--AKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRS------------DPIVFTDSPKA 433 (444)
T ss_dssp BGGGCCS--TTCCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSS------------SCEETTCCCCS
T ss_pred CCccccC--CCCCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCC------------CceecccCCCc
Confidence 9985454 34788999999999999999 5 78899999999999999 99999999999
Q ss_pred cccccccc
Q 005183 661 TKLVDLSL 668 (710)
Q Consensus 661 ~~lI~~~l 668 (710)
...|+..|
T Consensus 434 l~~Ie~~~ 441 (444)
T 3cb6_A 434 QGDISYFF 441 (444)
T ss_dssp HHHHEECC
T ss_pred HHHHHhhh
Confidence 88888644
No 12
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=5.7e-59 Score=514.28 Aligned_cols=372 Identities=16% Similarity=0.104 Sum_probs=306.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHH
Q 005183 240 IRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPD 319 (710)
Q Consensus 240 i~~~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~ 319 (710)
-...+..|+++++++|++++|+.|+++|+|++|+++++|++|||||..+.. ..| .+++|+.++.++|++.......
T Consensus 11 ~~~~~~~~~~~e~~~R~~~l~~~m~~~~~da~li~~~~ni~yltg~~~~~~-~~~---~~llv~~~~~~l~~~~~~~~~~ 86 (401)
T 1chm_A 11 GDKVRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCSF-GRP---YALVVTEDDVISISANIDGGQP 86 (401)
T ss_dssp SCCCCCSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHH
T ss_pred CCccccCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcccceeeCCCCcCCC-CCe---EEEEEecCCCEEEecccchhhH
Confidence 334467899999999999999999999999999999999999999865321 122 2455788888999985444332
Q ss_pred HHhhhhcCCeEEeec--ccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCC
Q 005183 320 VMDHLKNAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGP 397 (710)
Q Consensus 320 ~~~~l~~~~V~i~~y--~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (710)
..+.+....+...++ +++.+.|.++..+.++||+|.+.+++..++.|++.+ ++.
T Consensus 87 ~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~------------------------~~~ 142 (401)
T 1chm_A 87 WRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARY------------------------PDA 142 (401)
T ss_dssp HHHCCSSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHC------------------------TTC
T ss_pred HHhhcccceeeeccccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhC------------------------CCC
Confidence 233222122333333 456667777654567999999999999998887643 456
Q ss_pred cccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhh---CCCCCCCCc
Q 005183 398 AGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---SGFLDTSFD 474 (710)
Q Consensus 398 ~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~---~g~~~~sf~ 474 (710)
+++++++++..+|+|||++||+.||+|+++++.++..+.+.+ ++|+||.|+++.+++...+. ......+|+
T Consensus 143 ~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~~~~~~~~~~~~~~~~ 216 (401)
T 1chm_A 143 ELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEAL------GDQVPEYEVALHATQAMVRAIADTFEDVELMD 216 (401)
T ss_dssp EEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHHHHHCSSCCBCC
T ss_pred EEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHhccccCCCccccC
Confidence 789999999999999999999999999999999988776655 89999999999887643322 111123566
Q ss_pred e--eEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 005183 475 T--ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFP 552 (710)
Q Consensus 475 ~--iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P 552 (710)
+ ++++|.|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|++|++++.+++++++|
T Consensus 217 ~~~~~~~g~n~~~~H~~~~~---~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~p 293 (401)
T 1chm_A 217 TWTWFQSGINTDGAHNPVTT---RKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKP 293 (401)
T ss_dssp CEEEEEEGGGGGSTTCCEES---CBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred cceeeeecccccccccCCCC---CccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5 47999999999999876 899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCcc--cccCCCCccccCCCEEEECceeeec----Ccc
Q 005183 553 QSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----HAF 624 (710)
Q Consensus 553 ~G~~~~~v~~~ar~~l~~~G~~--~~h~~GHGIG~~l~vhE~P~~i--~~~~~~~~~L~~GMV~siEPgiy~~----g~~ 624 (710)
|+++.+|++++++.+++.|+. +.|++||||| +.+||.|..+ +..++++.+|+||||||+|||+|.+ |.+
T Consensus 294 -G~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~g~~ 370 (401)
T 1chm_A 294 -GARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAG 370 (401)
T ss_dssp -TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEECTTSTTCE
T ss_pred -CCcHHHHHHHHHHHHHHcCCCcccCCCCCcccC--ccCCccccccCccccCCCCCccCCCCEEEEcCeeeeccccCCCC
Confidence 999999999999999999993 6799999999 8899976422 2333477899999999999999998 889
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCCccccc
Q 005183 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKL 663 (710)
Q Consensus 625 GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~l 663 (710)
|+|+||+|+||++ |+|+||.+|++.++
T Consensus 371 GvriEd~vlVt~~------------G~e~LT~~p~~~~~ 397 (401)
T 1chm_A 371 GYREHDILIVNEN------------GAENITKFPYGPEK 397 (401)
T ss_dssp EEECBEEEEEETT------------EEEECCCSCCSHHH
T ss_pred eEEEeeeEEECCC------------cceECCCCCCChhh
Confidence 9999999999999 99999999987554
No 13
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=9.1e-58 Score=509.99 Aligned_cols=367 Identities=20% Similarity=0.255 Sum_probs=299.9
Q ss_pred ccchhHHHHHHHHHHHHHHcCCCEEEEccc---------------chhhhhcCCCCCCCCCCceeEEEEEEeC-----Cc
Q 005183 247 YAGLDVASKLSSLRSDLVDAGSSAIVISML---------------DEIAWLLNLRGSDVPHSPVMYAYLIVEM-----DR 306 (710)
Q Consensus 247 ~ag~~~~~Kl~~lr~~L~e~glDallis~~---------------dnIaYLtg~rg~di~~~Pv~~a~liV~~-----~~ 306 (710)
++++++++|+++|++.|++++ +++|++.+ .|+.|||||...+ ++++++. ++
T Consensus 3 ~~~~e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~~--------~~lvi~~~~~~~~~ 73 (440)
T 2v3z_A 3 ISRQEFQRRRQALVEQMQPGS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNH 73 (440)
T ss_dssp CCHHHHHHHHHHHHHHSCSSE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSS--------CEEEEEECSSSCEE
T ss_pred CCHHHHHHHHHHHHHhcccCC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCCC--------EEEEEEecCCCCce
Confidence 467899999999999999887 79999876 8999999997543 6777764 46
Q ss_pred eEEEEeCCCCCHHH--------HhhhhcCCe-EEeecccHHHHHHHHHhcCCEEEEeCCCCcHH---HHHHHHHHHHHHh
Q 005183 307 AKLFVDDSKVTPDV--------MDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAA---IMNTYEIAIEKYL 374 (710)
Q Consensus 307 ~~Lfvd~~k~~~~~--------~~~l~~~~V-~i~~y~~i~~~l~~l~~~~~~i~ld~~~~~~~---~~~~L~~~~~~~~ 374 (710)
++||++......+. .......++ .+.+++++.+.|.++..+.++|+++....+.. ....+.... ...
T Consensus 74 ~~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~-~~~ 152 (440)
T 2v3z_A 74 SVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLR-KGS 152 (440)
T ss_dssp EEEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHH-TCG
T ss_pred EEEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHh-hhc
Confidence 89999865432221 011111233 56789999888888765567899987643211 111222110 000
Q ss_pred hhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 005183 375 TSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDV 454 (710)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~el 454 (710)
.....++.+++++.+++..+|+|||++||+.||+|+++++.|+.++++++ ++|+||.|+
T Consensus 153 ---------------~~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el 211 (440)
T 2v3z_A 153 ---------------RQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKC------RPGMFEYHL 211 (440)
T ss_dssp ---------------GGTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHH
T ss_pred ---------------ccccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHH
Confidence 00001456788999999999999999999999999999999999998887 899999999
Q ss_pred HHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeC-CCCCHHHH
Q 005183 455 ADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREK 533 (710)
Q Consensus 455 a~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~-G~pt~e~~ 533 (710)
++.++.... ..|+.+.+|++|+++|+|++++||.|++ ++|++||+|++|+|++|.||++|+||||++ |+|+++|+
T Consensus 212 ~~~~~~~~~-~~G~~~~~f~~iv~~G~n~~~~H~~~~~---~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~ 287 (440)
T 2v3z_A 212 EGEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---CEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQR 287 (440)
T ss_dssp HHHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHH
T ss_pred HHHHHHHHH-HcCCCcCCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHH
Confidence 999976544 4677789999999999999999999876 899999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHH----cC--------------C--CCcCccccccccCCccccCC
Q 005183 534 ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWK----IG--------------L--DYRHGTGHGVGAALNVHEGP 593 (710)
Q Consensus 534 ~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~----~G--------------~--~~~h~~GHGIG~~l~vhE~P 593 (710)
++|++|++++.+++++++| |+++.+|+.++++++.+ .| + .|.|++||||| +++||.|
T Consensus 288 ~~y~~v~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiG--l~~he~p 364 (440)
T 2v3z_A 288 EIYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG--LDVHDVG 364 (440)
T ss_dssp HHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS--SSSSCCS
T ss_pred HHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCC--cccccCC
Confidence 9999999999999999999 99999999999998753 44 3 47999999999 9999999
Q ss_pred CcccccCCCCccccCCCEEEECceeeecC---------cceEEEEEeEEEeecCCCCCCCCcccccceecc-cCCccccc
Q 005183 594 QSISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLT-FVPIQTKL 663 (710)
Q Consensus 594 ~~i~~~~~~~~~L~~GMV~siEPgiy~~g---------~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT-~~P~~~~l 663 (710)
. +.. +++.+|+||||||||||+|.++ .+||||||+|+||++ |+|+|| .+|++...
T Consensus 365 ~-~~~--~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~------------G~e~LT~~~p~~~~~ 429 (440)
T 2v3z_A 365 V-YGQ--DRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKKPEE 429 (440)
T ss_dssp C-CCG--GGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETT------------EEEESSTTSCCSHHH
T ss_pred C-cCC--CCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEECCC------------cCeECCcccCCCHHH
Confidence 7 332 2568999999999999999997 579999999999999 999999 59988877
Q ss_pred ccc
Q 005183 664 VDL 666 (710)
Q Consensus 664 I~~ 666 (710)
|+.
T Consensus 430 Ie~ 432 (440)
T 2v3z_A 430 IEA 432 (440)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 14
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=8e-58 Score=506.19 Aligned_cols=364 Identities=21% Similarity=0.266 Sum_probs=307.6
Q ss_pred chhHHHHHHHHHHHHHHcCC-------------CEEE-EcccchhhhhcCCCCCCCCCCceeEEEEEEeC----CceEEE
Q 005183 249 GLDVASKLSSLRSDLVDAGS-------------SAIV-ISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEM----DRAKLF 310 (710)
Q Consensus 249 g~~~~~Kl~~lr~~L~e~gl-------------Dall-is~~dnIaYLtg~rg~di~~~Pv~~a~liV~~----~~~~Lf 310 (710)
.+.|++|+++|.+.|.+.++ |... +....|+.|||||.+.+ +++++.. ++.+||
T Consensus 3 ~~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~--------~~~v~~~~~~~~~~~lf 74 (427)
T 3ig4_A 3 SKFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPN--------VIFMLKKFGNSVEETLF 74 (427)
T ss_dssp HHHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTT--------CEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCC--------EEEEEEccCCCceEEEE
Confidence 46799999999999987655 4322 44456899999999876 6777754 267899
Q ss_pred EeC----------CCCCHHHHhhhhcCCe-EEeecccHHHHHHHHHhc--CCEEEEeCCC--------CcHHHHHHHHHH
Q 005183 311 VDD----------SKVTPDVMDHLKNAGV-ELRPYNSILSEIKSLAAQ--GAQLWLDPSS--------VNAAIMNTYEIA 369 (710)
Q Consensus 311 vd~----------~k~~~~~~~~l~~~~V-~i~~y~~i~~~l~~l~~~--~~~i~ld~~~--------~~~~~~~~L~~~ 369 (710)
++. .++..+..... .++ .+.+.+++.+.|..+..+ ..+|+++.+. .++..++.|++.
T Consensus 75 v~~~~~~~~~w~g~r~~~~~a~~~--~~~~~v~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (427)
T 3ig4_A 75 IEKSDPVMEKWVGKTVSNEEAEKI--SGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQ 152 (427)
T ss_dssp ECCCCTTGGGTTCCCCCHHHHHHH--HCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ecCCCccceEEeCCCCcHHHHHhc--CCCCEEEEhhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhh
Confidence 975 34444333322 244 466778888888887654 6789998642 345566666653
Q ss_pred HHHHhhhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005183 370 IEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKL 449 (710)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~ 449 (710)
+ |+.+++++++.+..+|+|||++||+.||+|+++++.|+.++++.+ ++|+
T Consensus 153 ~------------------------~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~ 202 (427)
T 3ig4_A 153 Y------------------------PHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHA------KADM 202 (427)
T ss_dssp C------------------------TTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CSSE
T ss_pred C------------------------CCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCC
Confidence 2 567889999999999999999999999999999999999988776 8999
Q ss_pred CHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeC-CCC
Q 005183 450 TEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEP 528 (710)
Q Consensus 450 tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~-G~p 528 (710)
||.|+++.++.... ..|..+.+|++|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++ |++
T Consensus 203 tE~el~~~~~~~~~-~~G~~~~~f~~ivasG~n~~~~H~~~~~---~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~ 278 (427)
T 3ig4_A 203 MEYELEAQFDFTLK-SSGIKHHAFNTILASGKNATVLHYEDND---AQIQNGDLVLLDLGAQKDYYNADISYTFPANGTF 278 (427)
T ss_dssp EHHHHHHHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SEECTTCEEEEEECEEETTEECCEEEEEETTSCC
T ss_pred CHHHHHHHHHHHHH-HcCCCCCCCCCEEEECccccccccCccc---ccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCC
Confidence 99999999987654 4677788999999999999999999876 899999999999999999999999999999 899
Q ss_pred CHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHc----CC---------CCcCccccccccCCccccCCCc
Q 005183 529 TAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI----GL---------DYRHGTGHGVGAALNVHEGPQS 595 (710)
Q Consensus 529 t~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~----G~---------~~~h~~GHGIG~~l~vhE~P~~ 595 (710)
+++|+++|++|++++.+++++++| |+++.+|+.++++++++. |+ .|.|++||||| |++||.|.
T Consensus 279 s~~~~~~y~~vl~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe~~~- 354 (427)
T 3ig4_A 279 SSRQKQIYNIVLNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVGT- 354 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCcCCC-
Confidence 999999999999999999999999 999999999999999875 33 58999999999 99999874
Q ss_pred ccccCCCCccccCCCEEEECceeeecCcc-eEEEEEeEEEeecCCCCCCCCcccccceeccc-CCccccccccccCCHHH
Q 005183 596 ISFRYGNMTPLVEGMIVSNEPGYYEDHAF-GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTKLVDLSLLSAAE 673 (710)
Q Consensus 596 i~~~~~~~~~L~~GMV~siEPgiy~~g~~-GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~-~P~~~~lI~~~ll~~~e 673 (710)
+.+.+|+||||||||||+|.++.+ ||||||+|+||++ |+|+||. +|++.+.|+. +|...|
T Consensus 355 -----~~~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt~~------------G~e~LT~~~pk~~~~IE~-~m~~~~ 416 (427)
T 3ig4_A 355 -----YKDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKD------------GHENLSKDIIREVEEIEE-FMRENN 416 (427)
T ss_dssp -----CTTCBCCTTCEEEECCEEEEGGGTEEEECBEEEEECSS------------SEEETTTTSCCSHHHHHH-HHHHHC
T ss_pred -----CCCCEeCCCCEEEECCEEEECCCceEEEEeeEEEEeCC------------cCeECCCCCCCCHHHHHH-HHccCc
Confidence 257899999999999999999875 9999999999999 9999996 8999999994 668999
Q ss_pred HHHHH
Q 005183 674 IDWLN 678 (710)
Q Consensus 674 ~~~ln 678 (710)
+.|||
T Consensus 417 ~~~~~ 421 (427)
T 3ig4_A 417 VNVKQ 421 (427)
T ss_dssp TTC--
T ss_pred ccccc
Confidence 99999
No 15
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=2.1e-52 Score=472.54 Aligned_cols=370 Identities=21% Similarity=0.265 Sum_probs=284.2
Q ss_pred ccccchhHHHHHHHHHHHHHHcCC----CEEEEc-----------------ccchhhhhcCCCCCCCCCCceeEEEEEEe
Q 005183 245 LKYAGLDVASKLSSLRSDLVDAGS----SAIVIS-----------------MLDEIAWLLNLRGSDVPHSPVMYAYLIVE 303 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~e~gl----Dallis-----------------~~dnIaYLtg~rg~di~~~Pv~~a~liV~ 303 (710)
..|+.+++.+|+++|++.|++++. +++|+. ...|+.|||||+..+ +++++.
T Consensus 17 ~~i~~~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~--------~~~vi~ 88 (494)
T 2iw2_A 17 LKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPG--------CYGVID 88 (494)
T ss_dssp CCEETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSS--------CEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCC--------eEEEEE
Confidence 467889999999999999998854 588883 344789999997654 566664
Q ss_pred --CCceEEEEeCCCCCHHHH--------hhhhcCCe-EEeecccHHHHHHHHHhcCCEEEEe----CCCCcHHHHHHHHH
Q 005183 304 --MDRAKLFVDDSKVTPDVM--------DHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLD----PSSVNAAIMNTYEI 368 (710)
Q Consensus 304 --~~~~~Lfvd~~k~~~~~~--------~~l~~~~V-~i~~y~~i~~~l~~l~~~~~~i~ld----~~~~~~~~~~~L~~ 368 (710)
.++++||++......+.. .+....++ .+.+.+++.+.|+++. .+++++. .+.........+.
T Consensus 89 ~~~~~~~L~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~i~~~~g~~~~~~~~~~~~~~~- 165 (494)
T 2iw2_A 89 VDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQK--PSVLLTLRGVNTDSGSVCREASFD- 165 (494)
T ss_dssp TTTCCEEEEECCCCGGGTTTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHTC--CSCEECCCCBCTTTCCBCCCCCCT-
T ss_pred ccCCeEEEEECCCCHHHhhhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhcC--CCeEEEecCccccccccccHhhhh-
Confidence 478999997532211100 01111122 3466677777777653 4556552 2110000000000
Q ss_pred HHHHHhhhccccccccccccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 005183 369 AIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAK 448 (710)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g 448 (710)
.+.....+.+++.+.+..+|+|||++||+.||+|+++++.++.++++.+ ++|
T Consensus 166 ----------------------~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~~G 217 (494)
T 2iw2_A 166 ----------------------GISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV------KVG 217 (494)
T ss_dssp ----------------------TGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTT
T ss_pred ----------------------hhhhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCC
Confidence 0000112344566788999999999999999999999999999988876 899
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCC-CCCCcccCCCCeEEEecceeeCCeEeeeEeeeeC-C
Q 005183 449 LTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE-PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-G 526 (710)
Q Consensus 449 ~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~-~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~-G 526 (710)
+||.|+++.++..+.+..|+...+|++|+++|+|++++||.++ ..+++.|++||+|++|+|++|+||++|+||||++ |
T Consensus 218 ~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G 297 (494)
T 2iw2_A 218 MKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANG 297 (494)
T ss_dssp CBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTS
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECC
Confidence 9999999999876555557778899999999999999998654 2235899999999999999999999999999999 8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHH----cCC----------------CCcCccccccccC
Q 005183 527 EPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWK----IGL----------------DYRHGTGHGVGAA 586 (710)
Q Consensus 527 ~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~----~G~----------------~~~h~~GHGIG~~ 586 (710)
+++++|+++|++|++++.+++++++| |+++.+|+.++++++++ .|+ .|.|++|||||
T Consensus 298 ~~s~~q~~~y~~v~~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiG-- 374 (494)
T 2iw2_A 298 KFTADQKAVYEAVLRSSRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLG-- 374 (494)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCC--
Confidence 99999999999999999999999999 99999999999998764 453 37899999999
Q ss_pred CccccCCCcc---------cc-cCCCCccccCCCEEEECceeeec--------------------------CcceEEEEE
Q 005183 587 LNVHEGPQSI---------SF-RYGNMTPLVEGMIVSNEPGYYED--------------------------HAFGIRIEN 630 (710)
Q Consensus 587 l~vhE~P~~i---------~~-~~~~~~~L~~GMV~siEPgiy~~--------------------------g~~GiriEd 630 (710)
|++||.|... .+ ...++.+|+||||||||||+|.+ |.+||||||
T Consensus 375 l~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED 454 (494)
T 2iw2_A 375 IDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEE 454 (494)
T ss_dssp SSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBE
T ss_pred cccccCCCcccccccccccccccCCCCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEeee
Confidence 9999953210 01 01256799999999999999974 678999999
Q ss_pred eEEEeecCCCCCCCCcccccceecccCCcccccccccc
Q 005183 631 LLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDLSL 668 (710)
Q Consensus 631 ~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~lI~~~l 668 (710)
+|+||++ |+|+||.+|++...|+..|
T Consensus 455 ~vlVte~------------G~e~LT~~p~~~~~ie~~m 480 (494)
T 2iw2_A 455 DVVVTDS------------GIELLTCVPRTVEEIEACM 480 (494)
T ss_dssp EEEECSS------------SEEECCCCCCSHHHHHHHH
T ss_pred EEEEcCC------------cCeECCCCCCcHHHHHHHH
Confidence 9999999 9999999999888887655
No 16
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=3.2e-51 Score=455.94 Aligned_cols=352 Identities=18% Similarity=0.177 Sum_probs=269.8
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcC-----CCCCCC-----CCCceeEEEEEEeC-CceEEEEeCCC-CCH
Q 005183 251 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLN-----LRGSDV-----PHSPVMYAYLIVEM-DRAKLFVDDSK-VTP 318 (710)
Q Consensus 251 ~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg-----~rg~di-----~~~Pv~~a~liV~~-~~~~Lfvd~~k-~~~ 318 (710)
-.+.+.+|+++.|++.+.|+++|.+..++.|++| ||.... .++...-++|++.. ++++||+...+ +-.
T Consensus 11 ~~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~ 90 (451)
T 3rva_A 11 HIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWH 90 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhh
Confidence 3456778899999999999999999999999988 655310 11100125777753 46777776421 110
Q ss_pred H----HHhh-hhcCCe-EEeecccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCC
Q 005183 319 D----VMDH-LKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 392 (710)
Q Consensus 319 ~----~~~~-l~~~~V-~i~~y~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (710)
. ..+. ....+| .+.+.+++.+.|..+ ..++++.......+. +.. .
T Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~~~~~~g~~~~~~~---~~~----~------------------- 141 (451)
T 3rva_A 91 KVPPEPNDFWTDSFDIKLLQQADAVEKFLPYD---KSRFAYVGEYIEVAK---ALG----F------------------- 141 (451)
T ss_dssp CCCCSCCSTTGGGSEEEEESSGGGGGGGSCSC---GGGEEEESSCHHHHH---HHT----C-------------------
T ss_pred ccccCcchhHHhccCeEEEecHHHHHHHHhhc---cCceEEEccCcCHHH---hhh----h-------------------
Confidence 0 0111 122334 344445555544332 234555543332211 100 0
Q ss_pred CCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q 005183 393 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 472 (710)
Q Consensus 393 ~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~s 472 (710)
....++++.+.+..+|+|||++||+.||+|+++++.|+..+++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 142 --~~~~~~~~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i------~pG~tE~el~~~~~~~~--~~g~~~~~ 211 (451)
T 3rva_A 142 --DNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAF------REGKSEFDINLAYAAAS--RQGDNDVP 211 (451)
T ss_dssp --SCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTCCHHHHHHHHHHHH--TCCTTTSS
T ss_pred --cccCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 123467888899999999999999999999999999999888877 89999999999876532 45667889
Q ss_pred CceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCC--CHHHHHHHHHHHHHHHHHHHcc
Q 005183 473 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEP--TAREKECFTRVLQGHIALDQAI 550 (710)
Q Consensus 473 f~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~p--t~e~~~~y~~vl~a~~~~~~~i 550 (710)
|++|+++|+|++++||.|++ .+.+++||+|+||+|++|+||++|+||||++|++ +++++++|++|++++.++++++
T Consensus 212 f~~IVasG~naa~~H~~~~~--~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~i 289 (451)
T 3rva_A 212 YTSIVALNEHASILHYMQCD--TVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSL 289 (451)
T ss_dssp SCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEEECCcccccCCCCCC--CcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999976 1347999999999999999999999999999987 8899999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHH-----------------HcCC---CCcCccccccccCCccccCCCccccc-----------
Q 005183 551 FPQSTPGFVLDAFARSSLW-----------------KIGL---DYRHGTGHGVGAALNVHEGPQSISFR----------- 599 (710)
Q Consensus 551 ~P~G~~~~~v~~~ar~~l~-----------------~~G~---~~~h~~GHGIG~~l~vhE~P~~i~~~----------- 599 (710)
+| |+++.+|+.+++++++ +.|+ .|.|++||||| |++||.|......
T Consensus 290 kP-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~~~~~~ 366 (451)
T 3rva_A 290 KP-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKPAPDDH 366 (451)
T ss_dssp CT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCCCCTTC
T ss_pred CC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCcccccccccccccccccc
Confidence 99 9999999999999886 5566 58999999999 9999998633210
Q ss_pred C--CCCccccCCCEEEECceeeec-------------------------CcceEEEEEeEEEeecCCCCCCCCcccccce
Q 005183 600 Y--GNMTPLVEGMIVSNEPGYYED-------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFE 652 (710)
Q Consensus 600 ~--~~~~~L~~GMV~siEPgiy~~-------------------------g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E 652 (710)
+ .+..+|+||||||||||+|.+ |.+||||||+|+||++ |+|
T Consensus 367 ~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~------------G~e 434 (451)
T 3rva_A 367 PFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRD------------KNE 434 (451)
T ss_dssp TTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEE
T ss_pred ccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCC------------cce
Confidence 1 356799999999999999983 5679999999999999 999
Q ss_pred ecccCC
Q 005183 653 KLTFVP 658 (710)
Q Consensus 653 ~LT~~P 658 (710)
+||..|
T Consensus 435 ~LT~~~ 440 (451)
T 3rva_A 435 NMTRDL 440 (451)
T ss_dssp EHHHHT
T ss_pred ECCCCC
Confidence 999765
No 17
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=2.6e-49 Score=444.42 Aligned_cols=352 Identities=19% Similarity=0.156 Sum_probs=267.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhhcC-----CCCCCC-----CCCceeEEEEEEeC-CceEEEEeCCC-CCHH
Q 005183 252 VASKLSSLRSDLVDAGSSAIVISMLDEIAWLLN-----LRGSDV-----PHSPVMYAYLIVEM-DRAKLFVDDSK-VTPD 319 (710)
Q Consensus 252 ~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg-----~rg~di-----~~~Pv~~a~liV~~-~~~~Lfvd~~k-~~~~ 319 (710)
.+.+.+|+++.|++.+.|+++|.+..++.|++| ||.... .++...-++|++.. +++.||+...+ +-..
T Consensus 12 ~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~g 91 (517)
T 3l24_A 12 IATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHK 91 (517)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhhc
Confidence 456778899999999999999999999999887 655420 11100125777753 46777775321 1100
Q ss_pred ----HHhh-hhcCCe-EEeecccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCC
Q 005183 320 ----VMDH-LKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQ 393 (710)
Q Consensus 320 ----~~~~-l~~~~V-~i~~y~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (710)
..+. ....+| .+.+.+++.+.|..+ ..++++.......+. +.. .
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~---~~~~~~~g~~~~~~~---~~~----~-------------------- 141 (517)
T 3l24_A 92 VPDEPNEYWADYFDIELLVKPDQVEKLLPYD---KARFAYIGEYLEVAQ---ALG----F-------------------- 141 (517)
T ss_dssp CCCCCCSGGGGGSEEEEESSGGGCGGGSCSC---CTTEEEESSCHHHHH---HHT----C--------------------
T ss_pred cccCchhhhhhccCeEEEcCHHHHHHHHhhc---cCceEEEcCCcCHHH---hhh----h--------------------
Confidence 0111 122334 344445555444332 334555544333211 100 0
Q ss_pred CCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCC
Q 005183 394 SGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSF 473 (710)
Q Consensus 394 ~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf 473 (710)
....++++.+.+..+|+|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.+.... ..|..+.+|
T Consensus 142 -~~~~~~~~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~i------kpG~tE~el~~~~~~~~--~~g~~~~sf 212 (517)
T 3l24_A 142 -ELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAF------FQGKSEFEIQQAYLLAT--QHSENDNPY 212 (517)
T ss_dssp -CCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTCCHHHHHHHHHHHH--TCCGGGSSS
T ss_pred -ccCCchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH--HcCCCcCCc
Confidence 124567888899999999999999999999999999999888777 89999999998876532 356667899
Q ss_pred ceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 005183 474 DTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQ 553 (710)
Q Consensus 474 ~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~ 553 (710)
++|+++|+|++++||.|++ .+.+++||+|++|+|++|+||++|+||||++|++ ++++++|++|++++.+++++++|
T Consensus 213 ~~IVasG~naa~~H~~p~~--~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ikP- 288 (517)
T 3l24_A 213 GNIVALNENCAILHYTHFD--RVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLAP- 288 (517)
T ss_dssp CCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCCT-
T ss_pred CCEEEEccccccccCCCCC--CccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcCC-
Confidence 9999999999999999976 1347999999999999999999999999999975 78999999999999999999999
Q ss_pred CCChHHHHHHHHHHHH-----------------HcCC---CCcCccccccccCCccccCCCccccc-------------C
Q 005183 554 STPGFVLDAFARSSLW-----------------KIGL---DYRHGTGHGVGAALNVHEGPQSISFR-------------Y 600 (710)
Q Consensus 554 G~~~~~v~~~ar~~l~-----------------~~G~---~~~h~~GHGIG~~l~vhE~P~~i~~~-------------~ 600 (710)
|+++.+|+.++++.+. +.|+ .|.|++||||| |++||.|...... .
T Consensus 289 Gv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~~~~p~l 366 (517)
T 3l24_A 289 GKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPPEGHPFL 366 (517)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC---------------C
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCccccccccccccccccccccC
Confidence 9999999999998875 4454 58999999999 9999998632210 0
Q ss_pred CCCccccCCCEEEECceeeec-------------------------CcceEEEEEeEEEeecCCCCCCCCcccccceecc
Q 005183 601 GNMTPLVEGMIVSNEPGYYED-------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLT 655 (710)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~~-------------------------g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT 655 (710)
.++.+|+||||||||||+|.+ |.+||||||+|+||++ |+|+||
T Consensus 367 ~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~------------G~e~LT 434 (517)
T 3l24_A 367 RCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHED------------SLENMT 434 (517)
T ss_dssp CTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEEEHH
T ss_pred CCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCC------------cCeeCC
Confidence 356799999999999999983 5679999999999999 999999
Q ss_pred c-CCcc
Q 005183 656 F-VPIQ 660 (710)
Q Consensus 656 ~-~P~~ 660 (710)
. +|.+
T Consensus 435 ~~~~~~ 440 (517)
T 3l24_A 435 RELRLR 440 (517)
T ss_dssp HHTTCC
T ss_pred Cccchh
Confidence 4 7765
No 18
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=1.8e-47 Score=398.53 Aligned_cols=229 Identities=18% Similarity=0.192 Sum_probs=206.4
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCC
Q 005183 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 482 (710)
Q Consensus 408 ~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~n 482 (710)
.+++|||++||+.||+|+++++.++.++++++ ++|+||.|+++.++.++.+ .|... .+|++++++|.|
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~pG~tE~el~~~~~~~~~~-~G~~~~~~~~~~f~~iv~~g~n 76 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHV------KPNVTTNSLNDLCHNFITS-HNAIPAPLNYKGFPKSICTSIN 76 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEeccc
Confidence 47899999999999999999999998887766 8999999999999887654 44322 358999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005183 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (710)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~ 562 (710)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++.+++++++| |+++.+|++
T Consensus 77 ~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~ 152 (262)
T 3mx6_A 77 HVVCHGIPND---KPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGY 152 (262)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHH
T ss_pred ccccCCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHH
Confidence 9999999976 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeecCcceEEE------------
Q 005183 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYEDHAFGIRI------------ 628 (710)
Q Consensus 563 ~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~g~~Giri------------ 628 (710)
++++++++.|+. +.|++||||| +++||.|...++ .++++.+|++||||++|||+|. |.+|+|+
T Consensus 153 ~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~-g~~gvri~~~d~w~~~~~~ 229 (262)
T 3mx6_A 153 AIQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINA-GNYDTILSKLDGWTVTTRD 229 (262)
T ss_dssp HHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEES-SCSCEEECTTTSCCEEETT
T ss_pred HHHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEc-CCCeEEEecCCCceEEecC
Confidence 999999999995 7899999999 999999974433 2347889999999999999997 7788877
Q ss_pred -------EEeEEEeecCCCCCCCCcccccceecccCCcccc
Q 005183 629 -------ENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 662 (710)
Q Consensus 629 -------Ed~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~ 662 (710)
||+|+||++ |+|+||..|+++.
T Consensus 230 ~~~~~~~Ed~v~Vt~~------------G~e~LT~~p~~l~ 258 (262)
T 3mx6_A 230 KSLSAQFEHTIGVTKD------------GFEIFTLSPKKLD 258 (262)
T ss_dssp CCCEEECBEEEEECSS------------SEEESCCCTTCCC
T ss_pred CCceeeeceEEEECCC------------cCeECCCCCcccC
Confidence 999999999 9999999997653
No 19
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=2.5e-47 Score=402.23 Aligned_cols=234 Identities=18% Similarity=0.141 Sum_probs=210.1
Q ss_pred ccCCcccccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCC
Q 005183 401 FRTSPIAFSK--AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSF 473 (710)
Q Consensus 401 d~~~~i~~lR--avKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf 473 (710)
+..+.+..+| +|||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++.+ .|... .+|
T Consensus 21 ~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~~~-~G~~~~~~~~~~f 93 (286)
T 3tav_A 21 SMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAA------KAGVSTLELDQVAESVIRE-AGAVPSFLGYHGF 93 (286)
T ss_dssp --CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGC
T ss_pred HHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHH-cCCcccccccCCC
Confidence 4567888999 99999999999999999999999888776 8999999999999987654 45433 379
Q ss_pred ceeEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 005183 474 DTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQ 553 (710)
Q Consensus 474 ~~iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~ 553 (710)
++|+++|+|++++||.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++.+++++++|
T Consensus 94 ~~iv~~g~n~~~~H~~p~~--~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp- 170 (286)
T 3tav_A 94 PASICSSVNDQVVHGIPSA--TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIP- 170 (286)
T ss_dssp CSSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCT-
T ss_pred CCceEEecCccccCCCCCC--CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 9999999999999999972 3899999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHH----HHc--CCC-CcCccccccccCCccccCCCccccc-CCCCccccCCCEEEECceeeec----
Q 005183 554 STPGFVLDAFARSSL----WKI--GLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYED---- 621 (710)
Q Consensus 554 G~~~~~v~~~ar~~l----~~~--G~~-~~h~~GHGIG~~l~vhE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~~---- 621 (710)
|+++++|+.++++++ ++. |+. +.|++||||| +++||+|...++. ++++.+|++||||+||||+|.+
T Consensus 171 G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~ 248 (286)
T 3tav_A 171 GNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQT 248 (286)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCce
Confidence 999999999999999 999 884 6899999999 9999999733221 3477899999999999999975
Q ss_pred -------------CcceEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 005183 622 -------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (710)
Q Consensus 622 -------------g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P 658 (710)
|.+|+|+||+|+||++ |+|+||..|
T Consensus 249 ~~~~~~w~~~t~dg~~gvriEd~v~Vt~~------------G~e~LT~~p 286 (286)
T 3tav_A 249 RVLADDWTVVTTDGSRAAHWEHTVAVTEA------------GPRILTMRP 286 (286)
T ss_dssp EECTTSSCEEETTCCCEEECBEEEECCTT------------SCEESSCCC
T ss_pred EecCCCceEEecCCCcEEEeeeEEEECCC------------cceeCCCCC
Confidence 4689999999999999 999999876
No 20
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-47 Score=397.43 Aligned_cols=232 Identities=18% Similarity=0.170 Sum_probs=207.1
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCCC
Q 005183 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANG 483 (710)
Q Consensus 409 lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~n~ 483 (710)
||.|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++.+..+ .|... .+|++++++|.|+
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~i------kpG~tE~el~~~~~~~~~~-~G~~~~~~~~~~~~~~v~~g~~~ 73 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFI------KPGITSWDIEVFVRDFIES-HGGVAAQIGYEGYKYATCCSIND 73 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCCSEEEEETT
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhC------cCCCCHHHHHHHHHHHHHH-cCCCcccccccCCCcceEECCcc
Confidence 6899999999999999999999998888776 9999999999999887654 44322 4578899999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHH
Q 005183 484 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 563 (710)
Q Consensus 484 a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ 563 (710)
+.+|+.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++|+++|+++++++.+++++++| |++++||+.+
T Consensus 74 ~~~H~~~~~---~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kp-G~~~~di~~a 149 (264)
T 3tb5_A 74 EICHGFPRK---KVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQV-GNRIGDIGHA 149 (264)
T ss_dssp EEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHH
T ss_pred cccCCCCCC---ccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCC-CCCHHHHHHH
Confidence 999999976 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------Ccc
Q 005183 564 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAF 624 (710)
Q Consensus 564 ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------g~~ 624 (710)
+++.+.+.|+. +.|++||||| +.+||.|..... .++++.+|+|||||+||||+|.+ |.+
T Consensus 150 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~ 227 (264)
T 3tb5_A 150 IQTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGL 227 (264)
T ss_dssp HHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCC
T ss_pred HHHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCcc
Confidence 99999999995 7899999999 899999973322 23466799999999999999964 456
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCCccccccc
Q 005183 625 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVD 665 (710)
Q Consensus 625 GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~lI~ 665 (710)
|+||||+|+||++ |+|+||..|+++..|+
T Consensus 228 gvriEd~vlVT~~------------G~e~LT~~p~el~~ie 256 (264)
T 3tb5_A 228 SCQYEHSLAITKE------------GPRILTSQGEELTYLE 256 (264)
T ss_dssp EEECCEEEECCTT------------CCEETTCCSSTTCC--
T ss_pred EEEeceEEEEcCC------------cCEECCCCCcchhhhh
Confidence 9999999999999 9999999997766555
No 21
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=1.4e-46 Score=396.34 Aligned_cols=224 Identities=21% Similarity=0.221 Sum_probs=204.1
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCC
Q 005183 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 482 (710)
Q Consensus 408 ~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~n 482 (710)
.+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++.+ .|... .+|++++++|.|
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~el~~~~~~~~~~-~G~~~~~~~~~~f~~iv~~g~n 109 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV------APGVTTDELDRIAHEYLVD-NGAYPSTLGYKGFPKSCCTSLN 109 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcHHHHHHHHHHHHHH-cCCccccccccCCCCceEeccc
Confidence 68999999999999999999999999888776 8999999999999987654 44322 468999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005183 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (710)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~ 562 (710)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++.+++++++| |+++.+|++
T Consensus 110 ~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~di~~ 185 (285)
T 3pka_A 110 EVICHGIPDS---TVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKP-GRALSVIGR 185 (285)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TSBTTHHHH
T ss_pred ceeecCCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHH
Confidence 9999999975 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCccccc-CCCCccccCCCEEEECceeeec-----------------Cc
Q 005183 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYED-----------------HA 623 (710)
Q Consensus 563 ~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~~-----------------g~ 623 (710)
++++.+++.|+. +.|++||||| +++||+|...++. ++++.+|++||||+||||+|.+ |.
T Consensus 186 ~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~ 263 (285)
T 3pka_A 186 VIESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRK 263 (285)
T ss_dssp HHHHHHHTTTCEECCSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTCC
T ss_pred HHHHHHHHcCCccCCCcccccCC--CcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcCCCceeecCCCceEEecCCC
Confidence 999999999995 8999999999 9999999733221 3467899999999999999984 57
Q ss_pred ceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 624 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 624 ~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
+|+|+||+|+||++ |+|+||.
T Consensus 264 ~gvriEdtv~Vt~~------------G~e~LT~ 284 (285)
T 3pka_A 264 WTAQFEHTLLVTDT------------GVEILTC 284 (285)
T ss_dssp CEEECBEEEEECSS------------SEEESSC
T ss_pred cEEEEeeEEEECCC------------cCeECCC
Confidence 89999999999999 9999995
No 22
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=4.3e-46 Score=388.43 Aligned_cols=230 Identities=16% Similarity=0.178 Sum_probs=206.0
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HHhhCCCC-----CCCCceeEeeCCC
Q 005183 409 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEF-RSKQSGFL-----DTSFDTISGSGAN 482 (710)
Q Consensus 409 lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~-~~~~~g~~-----~~sf~~iv~sG~n 482 (710)
||++||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++.+ +. ..|.. ..+|++++++|.|
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~el~~~~~~~~~~-~~g~~~~~~~~~~f~~iv~~g~n 73 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYV------KPGVSTGELDRICNDYIVN-EQHAVSACLGYHGYPKSVCISIN 73 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC------STTCBHHHHHHHHHHHHHH-TSCCEESSTTGGGCCSSSEEEET
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-HhCCccccccccCCCcceEeccc
Confidence 6899999999999999999999888776554 8999999999999987 54 34542 2479999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005183 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (710)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~ 562 (710)
++++||.|++ ++.|++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++.+++++++| |+++.+|+.
T Consensus 74 ~~~~H~~p~~--~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v~~ 150 (263)
T 2gg2_A 74 EVVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKP-GINLREIGA 150 (263)
T ss_dssp TEEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHH
T ss_pred ccccCCCCCC--CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9999999864 3789999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCcccc-cCCCCccccCCCEEEECceeeec-----------------Cc
Q 005183 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HA 623 (710)
Q Consensus 563 ~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~-~~~~~~~L~~GMV~siEPgiy~~-----------------g~ 623 (710)
++++.+++.|+. +.|++||||| +++||.|...++ .++++.+|++||||++|||+|.+ +.
T Consensus 151 ~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~ 228 (263)
T 2gg2_A 151 AIQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRS 228 (263)
T ss_dssp HHHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCC
T ss_pred HHHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCC
Confidence 999999999995 7899999999 999999974433 23467899999999999999973 45
Q ss_pred ceEEEEEeEEEeecCCCCCCCCcccccceecccCCcccc
Q 005183 624 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 662 (710)
Q Consensus 624 ~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~~~ 662 (710)
+|+|+||+|+||++ |+|+||..|++..
T Consensus 229 ~g~riEdtvlVt~~------------G~e~LT~~p~~l~ 255 (263)
T 2gg2_A 229 LSAQYEHTIVVTDN------------GCEILTLRKDDTI 255 (263)
T ss_dssp CEEECBEEEEEETT------------EEEESSCCTTCCS
T ss_pred eEEEEEEEEEECCC------------ccEEeCCCCcccC
Confidence 79999999999999 9999999997643
No 23
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=4.9e-46 Score=401.05 Aligned_cols=232 Identities=19% Similarity=0.205 Sum_probs=209.2
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCC-----CCCCceeEeeCCC
Q 005183 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 482 (710)
Q Consensus 408 ~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~-----~~sf~~iv~sG~n 482 (710)
.+++|||++||+.||+|+++++.++..+++++ ++|+||.||++.+++++.+ .|.. ..+|++++++|.|
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~i------kpGvTE~El~~~~~~~~~~-~Ga~ps~l~y~~Fp~iv~sg~N 171 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLV------SPGVTTDEIDRKVHEFIIK-NNAYPSTLNYYKFPKSCCTSVN 171 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSEEEEET
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCccccccccCCCCeEEEcCc
Confidence 46899999999999999999999999888776 8999999999999987654 4432 2469999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCC---CCCHHHHHHHHHHHHHHHHHHHccCCCCCChHH
Q 005183 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFG---EPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 559 (710)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G---~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~ 559 (710)
++++||.|++ ++|++||+|+||+|++|+||++|+||||++| +++++++++|+++++++.+++++++| |+++.+
T Consensus 172 ~~i~H~~p~~---r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikP-G~~~~d 247 (368)
T 3s6b_A 172 EIVCHGIPDY---RPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKP-GMFYKN 247 (368)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCT-TCBTHH
T ss_pred cccccCCCCC---ccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHH
Confidence 9999999976 8999999999999999999999999999999 89999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHcCCC-CcCccccccccCCccccCCCccccc-CCCCccccCCCEEEECceeee-----------------
Q 005183 560 LDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE----------------- 620 (710)
Q Consensus 560 v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~----------------- 620 (710)
|++++++++++.|+. +.|++||||| +++||.|....+. ++...+|++||||+||||+|.
T Consensus 248 I~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~ 325 (368)
T 3s6b_A 248 IGTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATS 325 (368)
T ss_dssp HHHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEET
T ss_pred HHHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCcccccccCCCceeEee
Confidence 999999999999996 8899999999 9999999744322 234678999999999999997
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceeccc-CCcccccc
Q 005183 621 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTKLV 664 (710)
Q Consensus 621 ~g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~-~P~~~~lI 664 (710)
+|.+|+|+||+|+||++ |+|+||. .|++..++
T Consensus 326 dG~~gvriEdtVlVTe~------------G~EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 326 DGKLSAQFEHTLLITNN------------GVEILTKRTQDSPPLG 358 (368)
T ss_dssp TCCCEEECBEEEEEETT------------EEEETTCCCTTCCCCS
T ss_pred CCccEEEEeEEEEEcCC------------cCeECCCCCCCCcCce
Confidence 46789999999999999 9999995 67766665
No 24
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=7.4e-46 Score=386.34 Aligned_cols=225 Identities=24% Similarity=0.230 Sum_probs=202.0
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCC
Q 005183 407 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGA 481 (710)
Q Consensus 407 ~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~ 481 (710)
..||++||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++.++.+. |... .+|++++++|.
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~f~~~v~~g~ 83 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVI------VPGKTAWDVETLVLEIFKKL-RVKPAFKGYGGYKYATCVSV 83 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGC------STTCBHHHHHHHHHHHHHHH-TCEESSTTGGGCCCSEEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCcHHHHHHHHHHHHHHc-CCccccccccCCCcceEecc
Confidence 469999999999999999999999888776554 89999999999999876554 4321 47889999999
Q ss_pred CCccccccCCCCCCcc-cCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHH
Q 005183 482 NGAIIHYKPEPGKCSV-VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 560 (710)
Q Consensus 482 n~a~~h~~p~~~~~~~-l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v 560 (710)
|++++||.|++ ++ |++||+|++|+|++|+||++|+||||++|+|+++|+++|+++++++.+++++++| |+++.+|
T Consensus 84 n~~~~H~~p~~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v 159 (262)
T 1o0x_A 84 NEEVVHGLPLK---EKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKP-GIRLGDV 159 (262)
T ss_dssp TTBCSCCCCCT---TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCT-TSBHHHH
T ss_pred cccccCCCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHH
Confidence 99999999976 88 9999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC-CcCccccccccCCccccCCCccccc-CCCCccccCCCEEEECceeee-----------------c
Q 005183 561 DAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE-----------------D 621 (710)
Q Consensus 561 ~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~-----------------~ 621 (710)
+.++++.+++.|+. +.|++||||| +++||.|...++. ++++.+|+|||||+||||+|. +
T Consensus 160 ~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~ 237 (262)
T 1o0x_A 160 SHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVD 237 (262)
T ss_dssp HHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETT
T ss_pred HHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceeecCCCceEEeeC
Confidence 99999999999996 8999999999 9999999733321 246789999999999999997 3
Q ss_pred CcceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 005183 622 HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 656 (710)
Q Consensus 622 g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~ 656 (710)
+.+|+|+||+|+||++ |+|+||.
T Consensus 238 g~~gvriEdtvlVt~~------------G~e~LT~ 260 (262)
T 1o0x_A 238 GSRCAHFEHTILITEN------------GAEILTK 260 (262)
T ss_dssp CCCEEECBEEEEECSS------------SEEESSC
T ss_pred CCcEEEEEEEEEECCC------------ccEeCCC
Confidence 6789999999999999 9999994
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=2.9e-45 Score=392.18 Aligned_cols=229 Identities=17% Similarity=0.153 Sum_probs=205.9
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCC-----CCCceeEeeCCC
Q 005183 408 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 482 (710)
Q Consensus 408 ~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~-----~sf~~iv~sG~n 482 (710)
.+|+|||++||+.||+|+++++.++..+++++ ++|+||.||++.+++++.+ .|... .+|++++++|.|
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i------~pGvte~el~~~~~~~~~~-~G~~~~~~~y~~fp~iv~sg~n 143 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMI------KPGVTTEEIDHAVHLACIA-RNCYPSPLNYYNFPKSCCTSVN 143 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCcHHHHHHHHHHHHHH-cCCccccccccCCCCeEEecCC
Confidence 57999999999999999999999999887766 8999999999999987655 34322 469999999999
Q ss_pred CccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHH
Q 005183 483 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 562 (710)
Q Consensus 483 ~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~ 562 (710)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+++++++++|+++++++.+++++++| |+++.+|+.
T Consensus 144 ~~~~H~~p~~---~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kP-G~~~~dI~~ 219 (329)
T 2b3h_A 144 EVICHGIPDR---RPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKP-GVRYRELGN 219 (329)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTTHHHH
T ss_pred CCcCCCCCCC---cCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHHHH
Confidence 9999999976 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCcccccCC-CCccccCCCEEEECceeee-----------------cCc
Q 005183 563 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYG-NMTPLVEGMIVSNEPGYYE-----------------DHA 623 (710)
Q Consensus 563 ~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~~-~~~~L~~GMV~siEPgiy~-----------------~g~ 623 (710)
++++.+++.|+. +.|++||||| +++||.|....+... ...+|++||||+||||+|. +|.
T Consensus 220 ~~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~ 297 (329)
T 2b3h_A 220 IIQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGK 297 (329)
T ss_dssp HHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCC
T ss_pred HHHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCcCcccccccCCCceeEeeCCe
Confidence 999999999996 8899999999 999999974332211 2478999999999999995 477
Q ss_pred ceEEEEEeEEEeecCCCCCCCCcccccceeccc-C-Cccc
Q 005183 624 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-V-PIQT 661 (710)
Q Consensus 624 ~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~-~-P~~~ 661 (710)
+|+|+||+|+||++ |+|+||. . |+..
T Consensus 298 ~g~riEdtvlVTe~------------G~evLT~~~~~k~~ 325 (329)
T 2b3h_A 298 RSAQFEHTLLVTDT------------GCEILTRRLDSARP 325 (329)
T ss_dssp CEEECBEEEEECSS------------SEEETTCCSSCSSC
T ss_pred EEEEEeeEEEEcCC------------eeEECCCCCCCCCC
Confidence 89999999999999 9999995 4 6554
No 26
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=2.1e-45 Score=380.73 Aligned_cols=223 Identities=21% Similarity=0.221 Sum_probs=200.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCC-----CCceeEeeCCCCccc
Q 005183 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT-----SFDTISGSGANGAII 486 (710)
Q Consensus 412 vKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~-----sf~~iv~sG~n~a~~ 486 (710)
|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++....+ .|.... +|++++++|.|++++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~el~~~~~~~~~~-~g~~~~~~~~~~f~~~v~~g~n~~~~ 75 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAAT------KPGITTKELDNIAKELFEE-YGAISAPIHDENFPGQTCISVNEEVA 75 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-HTCEEHHHHHHCCSSSSEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEEcCCcccc
Confidence 9999999999999999999888776655 8999999999999987654 344322 788899999999999
Q ss_pred cccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCH-HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 005183 487 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 565 (710)
Q Consensus 487 h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~-e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar 565 (710)
||.|++ ++|++||+|++|+|++|+||++|+||||++|++++ +|+++|+++++++.+++++++| |+++++|+.+++
T Consensus 76 H~~p~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kp-G~~~~~i~~~~~ 151 (252)
T 1qxy_A 76 HGIPSK---RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKP-GTKLSNIGKAVH 151 (252)
T ss_dssp CCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCT-TCBTHHHHHHHH
T ss_pred CCCCCC---cCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 999976 89999999999999999999999999999999999 9999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCccccccccCCccccCC-Cccccc-CCCCccccCCCEEEECceeee-----------------cCcce
Q 005183 566 SSLWKIGLD-YRHGTGHGVGAALNVHEGP-QSISFR-YGNMTPLVEGMIVSNEPGYYE-----------------DHAFG 625 (710)
Q Consensus 566 ~~l~~~G~~-~~h~~GHGIG~~l~vhE~P-~~i~~~-~~~~~~L~~GMV~siEPgiy~-----------------~g~~G 625 (710)
+.+++.|+. +.|++||||| +++||.| ...++. ++++.+|++||||++|||+|. ++.+|
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g 229 (252)
T 1qxy_A 152 NTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFV 229 (252)
T ss_dssp HHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCE
T ss_pred HHHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcE
Confidence 999999995 7899999999 9999999 643332 346789999999999999997 56789
Q ss_pred EEEEEeEEEeecCCCCCCCCcccccceecccCCcc
Q 005183 626 IRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (710)
Q Consensus 626 iriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~ 660 (710)
+|+||+|+||++ | |+||..|++
T Consensus 230 ~riEdtvlVt~~------------G-e~Lt~~p~~ 251 (252)
T 1qxy_A 230 AQIEHTVIVTKD------------G-PILTTKIEE 251 (252)
T ss_dssp EEEEEEEECCTT------------C-CEETTCC--
T ss_pred EEEEEEEEECCC------------c-eEccCCCCC
Confidence 999999999999 9 999999865
No 27
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=7.7e-45 Score=391.55 Aligned_cols=237 Identities=16% Similarity=0.102 Sum_probs=207.8
Q ss_pred cccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCC----CCCCCCce
Q 005183 400 VFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG----FLDTSFDT 475 (710)
Q Consensus 400 vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g----~~~~sf~~ 475 (710)
+...+++...|.|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++++..+.++ ....+|++
T Consensus 51 v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~i------kpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~ 124 (337)
T 4fuk_A 51 VKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAA------KPGITTDELDRIVHEATVERNMYPSPLNYYGFPK 124 (337)
T ss_dssp CCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCS
T ss_pred cccccchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCc
Confidence 3445566778999999999999999999999999888776 9999999999999877654322 23468999
Q ss_pred eEeeCCCCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCC
Q 005183 476 ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQST 555 (710)
Q Consensus 476 iv~sG~n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~ 555 (710)
++++|.|++++|+.|++ +.|++||+|++|+|+.|+||++|+||||++|+++++++++|+.+++++.+++++++| |+
T Consensus 125 iv~~g~n~~~~H~~~~~---~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kp-G~ 200 (337)
T 4fuk_A 125 SVCTSVNEVICHGIPDS---RELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKP-EA 200 (337)
T ss_dssp SSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCST-TC
T ss_pred eeeccccccccCCCCCC---ccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccc-cc
Confidence 99999999999999987 899999999999999999999999999999999999999999999999999999999 99
Q ss_pred ChHHHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCccccc-CCCCccccCCCEEEECceeeec------------
Q 005183 556 PGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYED------------ 621 (710)
Q Consensus 556 ~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~-~~~~~~L~~GMV~siEPgiy~~------------ 621 (710)
++++++.++++.+.+.|+. +.|++||||| +.+||.|....+. +++..+|+||||||||||+|.+
T Consensus 201 ~~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt 278 (337)
T 4fuk_A 201 LYKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWT 278 (337)
T ss_dssp BTTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSC
T ss_pred cHHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCe
Confidence 9999999999999999994 7899999999 8899988743322 2356789999999999999974
Q ss_pred -----CcceEEEEEeEEEeecCCCCCCCCcccccceecccCCcc
Q 005183 622 -----HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 660 (710)
Q Consensus 622 -----g~~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P~~ 660 (710)
|.+|+||||+|+||++ |+|+||..|..
T Consensus 279 ~~t~dg~~gvriEd~VlVTe~------------G~EvLT~~p~~ 310 (337)
T 4fuk_A 279 STTKDGRRSAQFEHTMVVTNG------------GVEIFTDWVDG 310 (337)
T ss_dssp EEETTCCCEEECBEEEEECSS------------SEEESSCCSSS
T ss_pred EEecCCceEEEeccEEEEcCC------------cCEECCCCCCC
Confidence 5679999999999999 99999987643
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=7.3e-39 Score=351.47 Aligned_cols=204 Identities=9% Similarity=0.028 Sum_probs=173.8
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhC---------CCCCCCCce
Q 005183 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS---------GFLDTSFDT 475 (710)
Q Consensus 405 ~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~---------g~~~~sf~~ 475 (710)
-+..+|+|||++||+.||+|++++..++..+.+.+ ++|+||.||++.+++++.+.. .+.+.+|++
T Consensus 12 ~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~i------kpGvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~ 85 (401)
T 2q8k_A 12 DEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEAS------SSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPT 85 (401)
T ss_dssp --CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHC------C-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEE
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCc
Confidence 36789999999999999999999999888777665 999999999999888655432 123456765
Q ss_pred eEeeCCCCccccccCCCC-CCcccCCCCeEEEecceeeCCeEeeeEeeeeCC-----CCCHHHHHHHHHHHHHHHHHHHc
Q 005183 476 ISGSGANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFG-----EPTAREKECFTRVLQGHIALDQA 549 (710)
Q Consensus 476 iv~sG~n~a~~h~~p~~~-~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G-----~pt~e~~~~y~~vl~a~~~~~~~ 549 (710)
+++ .|.+++||.|.+. .+++|++||+|+||+|++|+||++|+||||++| +|+++++++|+++++++.+++++
T Consensus 86 ~vS--~N~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~ 163 (401)
T 2q8k_A 86 SIS--VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRL 163 (401)
T ss_dssp EEE--ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe--CCcccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 554 7999999999432 248899999999999999999999999999999 89999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCcccccC-------CCCccccCCCEEEECceee
Q 005183 550 IFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-------GNMTPLVEGMIVSNEPGYY 619 (710)
Q Consensus 550 i~P~G~~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~~l~vhE~P~~i~~~~-------~~~~~L~~GMV~siEPgiy 619 (710)
++| |++++||+.++++++++.|+. +.+.+||||| +.+||.|..+...+ +++.+|++||||+|||+++
T Consensus 164 ~kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~ 238 (401)
T 2q8k_A 164 VKP-GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVS 238 (401)
T ss_dssp CST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEE
T ss_pred hCC-CCcHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceE
Confidence 999 999999999999999999994 6688999999 99999996232221 2567999999999999997
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=3.7e-37 Score=325.38 Aligned_cols=202 Identities=16% Similarity=0.099 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCCCCCCCCceeEeeCCCCccccccCCCCCC
Q 005183 416 AELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKC 495 (710)
Q Consensus 416 ~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g~~~~sf~~iv~sG~n~a~~h~~p~~~~~ 495 (710)
+||+.||+|+++++.++..+++++ +||+||.|+++.+++++.+ .|.. ++|++++++ |.+++||.|+..++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i------~pG~te~el~~~~~~~~~~-~G~~-~~fp~~vs~--n~~~~H~~p~~~~~ 70 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLA------RPGMLLLELAESIEKMIME-LGGK-PAFPVNLSI--NEIAAHYTPYKGDT 70 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCE-ESSCCEEEE--TTEEECCCCCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHH-cCCC-CCCCcEEee--CCccccccCCCCCC
Confidence 489999999999999999888776 9999999999999987654 4543 789988764 66789999975445
Q ss_pred cccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-
Q 005183 496 SVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD- 574 (710)
Q Consensus 496 ~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~- 574 (710)
++|++||+|++|+|++|+||++|+||||++|+ +++++|+++++++.+++++++| |++++||+.++++++++.|+.
T Consensus 71 ~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kp-G~~~~dI~~a~~~~~~~~G~~~ 146 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARA-GVEIKELGKAIENEIRKRGFKP 146 (295)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCST-TCBTHHHHHHHHHHHHTTTCEE
T ss_pred ccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHCCCeE
Confidence 89999999999999999999999999999997 7899999999999999999999 999999999999999999995
Q ss_pred CcCccccccccCCccccCCCcccccCCC-CccccCCCEEEECceeeecCcceEEEEEeEE
Q 005183 575 YRHGTGHGVGAALNVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYYEDHAFGIRIENLLY 633 (710)
Q Consensus 575 ~~h~~GHGIG~~l~vhE~P~~i~~~~~~-~~~L~~GMV~siEPgiy~~g~~GiriEd~v~ 633 (710)
+.|++|||||. +++||+|...++.+.+ +.+|+|||||+|||++| +|.+++|+|+..-
T Consensus 147 ~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~-~G~g~v~~~~~~~ 204 (295)
T 1xgs_A 147 IVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPTL 204 (295)
T ss_dssp CTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEEE
T ss_pred ECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE-CCCCEEEECCceE
Confidence 78999999985 5899999754443334 78999999999999999 8889999876443
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=1.2e-35 Score=329.03 Aligned_cols=199 Identities=17% Similarity=0.205 Sum_probs=172.8
Q ss_pred ccccc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHh---hCCC-CCCCCceeEeeCC
Q 005183 408 FSKAV--KNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSGA 481 (710)
Q Consensus 408 ~lRav--Ks~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~---~~g~-~~~sf~~iv~sG~ 481 (710)
.+|++ ||++||+.||+|++++..++..+...+ ++|+||.||++.++..... ..|. .+.+|+++++.
T Consensus 154 elR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~i------kpGvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~ivSv-- 225 (478)
T 1b6a_A 154 EKKALDQASEEIWNDFREAAEAHRQVRKYVMSWI------KPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSL-- 225 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC------CTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEE--
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEEEC--
Confidence 45555 999999999999999999888777665 9999999999988875432 2354 45689988764
Q ss_pred CCccccccCCCCCCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHH
Q 005183 482 NGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLD 561 (710)
Q Consensus 482 n~a~~h~~p~~~~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~ 561 (710)
|.+++||.|+..++++|+.||+|+||+|++|+||++|+||||++| ++++++|+++++++.+++++++| |+++++|+
T Consensus 226 N~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kP-G~~~~dI~ 301 (478)
T 1b6a_A 226 NNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGI-DVRLCDVG 301 (478)
T ss_dssp TTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHH
T ss_pred CCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHH
Confidence 778899999743348999999999999999999999999999997 68999999999999999999999 99999999
Q ss_pred HHHHHHHHHcCCC----------CcCcccccc-ccCCccccCCCcccccCCCCccccCCCEEEECceeee
Q 005183 562 AFARSSLWKIGLD----------YRHGTGHGV-GAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE 620 (710)
Q Consensus 562 ~~ar~~l~~~G~~----------~~h~~GHGI-G~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~ 620 (710)
.++++++++.|+. +.|++|||| | +.+||.|....+.+++..+|++||||+|||++|.
T Consensus 302 ~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG--l~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~ 369 (478)
T 1b6a_A 302 EAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ--YRIHAGKTVPIVKGGEATRMEEGEVYAIETFGST 369 (478)
T ss_dssp HHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT--TBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEES
T ss_pred HHHHHHHHHcCCCcccccccceeecCcceeCCCC--ccccCCCccceecCCCCCEeCCCCEEEEeCeeEC
Confidence 9999999999973 689999999 7 8999988755555567889999999999999884
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=8.5e-35 Score=313.89 Aligned_cols=201 Identities=12% Similarity=0.062 Sum_probs=177.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCC---CCCCCCceeEeeCCCCccccc
Q 005183 412 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG---FLDTSFDTISGSGANGAIIHY 488 (710)
Q Consensus 412 vKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g---~~~~sf~~iv~sG~n~a~~h~ 488 (710)
..|++||+.||+|+++++.++..+.+.+ ++|+||.|+++.+++...+..+ ..+.+|++++ |.|++++||
T Consensus 41 ~~s~~EI~~mR~A~~I~~~a~~~~~~~i------kpG~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~--s~N~~~~H~ 112 (360)
T 2nw5_A 41 FTESDILQDARRAAEAHRRARYRVQSIV------RPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGM--SMNSCAAHY 112 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEE--EETTEEECC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHHHhcCCCccCccccCcee--eccccccCC
Confidence 3499999999999999999998887666 9999999999999887655433 2356888874 689999999
Q ss_pred cCCCCC-CcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHH
Q 005183 489 KPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS 567 (710)
Q Consensus 489 ~p~~~~-~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~ 567 (710)
.|+..+ +++|++||+|+||+|++|+||++|+||||++| ++++++|+++++|+.+++++++| |++++||+++++++
T Consensus 113 ~P~~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kP-Gv~~~dI~~ai~~v 188 (360)
T 2nw5_A 113 TVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGV-DVRVCDIGRDINEV 188 (360)
T ss_dssp CCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHH
T ss_pred CCCcccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHH
Confidence 998533 58999999999999999999999999999995 58999999999999999999999 99999999999999
Q ss_pred HHHcCC----------CCcCccccccccCC-ccccCCCcccccCCCCccccCCCEEEECceeeecCcceEE
Q 005183 568 LWKIGL----------DYRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIR 627 (710)
Q Consensus 568 l~~~G~----------~~~h~~GHGIG~~l-~vhE~P~~i~~~~~~~~~L~~GMV~siEPgiy~~g~~Gir 627 (710)
+.+.|+ .+.|.+||||| + .+||.|.+.++.++++.+|++||||+|||++| +|.++||
T Consensus 189 i~~~G~~~~g~~~~~~~v~~~~GHgIG--~y~iHe~P~I~~~~~~~~~~Le~GmV~aIEP~i~-~G~G~Vr 256 (360)
T 2nw5_A 189 ISSYEVEIGGRMWPIRPISDLHGHSIS--QFRIHGGISIPAVNNRDTTRIKGDSFYAVETFAT-TGKGSID 256 (360)
T ss_dssp HTTCEEECSSSEEECEECTTCCEEEEB--TTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEE-SSCSCCE
T ss_pred HHHcCCccccccccccccCCeeEeeec--CceeccCCEeccccCCCCcEEeCCcEEEEeceEE-CCcceEE
Confidence 999986 25699999999 8 89999985445556888999999999999999 8999998
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.97 E-value=9.8e-30 Score=275.25 Aligned_cols=201 Identities=12% Similarity=0.063 Sum_probs=165.7
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCC---CCCCCCceeEeeCC
Q 005183 405 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG---FLDTSFDTISGSGA 481 (710)
Q Consensus 405 ~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela~~l~~~~~~~~g---~~~~sf~~iv~sG~ 481 (710)
-...+|.+|+++||+.||+|++++.+++..+...+ +||+|+.||++.++++..+..+ +.+.+|+++++ .
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~i------kpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciS--v 103 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIV------RPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--M 103 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--E
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEe--e
Confidence 34679999999999999999999999888777666 9999999999999887544322 23457886555 5
Q ss_pred CCccccccCCCC-CCcccCCCCeEEEecceeeCCeEeeeEeeeeCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCChHHH
Q 005183 482 NGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 560 (710)
Q Consensus 482 n~a~~h~~p~~~-~~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~pt~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v 560 (710)
|..++||.|... ++++|++||+|.||+|+.|+||++|+|||+.+|+..+ ++++++.+++.+++++++| |++..++
T Consensus 104 N~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~~---~l~~~~~~al~aai~~~~p-G~~~~di 179 (358)
T 3fm3_A 104 NSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENLE---PLLVAAREGTETGIKSLGV-DVRVCDI 179 (358)
T ss_dssp TTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGGH---HHHHHHHHHHHHHHHHCCT-TCBHHHH
T ss_pred CCEEEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccch---hHHHHHHHHHHHHHHhhhc-CCccccc
Confidence 667789998642 3589999999999999999999999999999996544 5667788889999999999 9999999
Q ss_pred HHHHHHHHHHcCCC----------CcCccccccccCCccccCCCcccccCCCCccccCCCEEEECcee
Q 005183 561 DAFARSSLWKIGLD----------YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGY 618 (710)
Q Consensus 561 ~~~ar~~l~~~G~~----------~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~~GMV~siEPgi 618 (710)
..++++++.+.|+. +.+.+|||||++ ..||.|...++..+...+|++||||+|||.+
T Consensus 180 g~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~-~~he~~~ip~~~~~~~~~le~GmV~tIEP~i 246 (358)
T 3fm3_A 180 GRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGDSFYAVETFA 246 (358)
T ss_dssp HHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSSEEEEEEEEE
T ss_pred cHHHHHHHhhccceeccccccccccccccccccCCc-cccCCCccCccCCCCCcEEeeeeeEEeeeee
Confidence 99999999988752 356789999943 4688887555555577899999999999986
No 33
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.89 E-value=5.9e-24 Score=198.76 Aligned_cols=127 Identities=24% Similarity=0.335 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEe-CCceEEEeCcccHHHHHh
Q 005183 78 QDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVT-KDKAALWTDGRYFLQAEK 156 (710)
Q Consensus 78 ~~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt-~~~a~L~tD~RY~~qA~~ 156 (710)
..++++|+++||+.|++ +++||+||+++ .|++|||||+||+|++||+ +++++||||+||++||++
T Consensus 7 ~~~~~~Rl~~l~~~m~~--~~~da~li~~~------------~n~~yltGf~~s~g~lvv~~~~~a~l~td~Ry~~qA~~ 72 (135)
T 3qoc_A 7 DTRFLQRRRALSAQLAA--KRIDAMLVTHL------------THIRYLSGFTGSNAALIINKDLSARISTDGRYITQIAE 72 (135)
T ss_dssp CCHHHHHHHHHHHTHHH--HTCSEEEECCH------------HHHHHHHCCCSSCCEEEEETTSCEEEEECGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH--CCCCEEEEcCh------------hhCeeeecccCCCeEEEEeeCCccEEEeCcHHHHHHHH
Confidence 35678999999999999 99999999875 6999999999999999999 899999999999999999
Q ss_pred hcCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHh
Q 005183 157 QLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 227 (710)
Q Consensus 157 e~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~i 227 (710)
|++ +|+++..+ ++.+||.+.+..+++||||++++|++.|++|++.++. +++++++ +++|+.+
T Consensus 73 ~~~-~~~i~~~~-----~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l~~-~~~lv~~--~~~v~~l 134 (135)
T 3qoc_A 73 QVP-DIESLMAR-----NCAPALLSDINGPKRVGFEADYLSVSQCEELRKSAGS-DVELIPV--TGAIEKL 134 (135)
T ss_dssp HCT-TSEEEECS-----SHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHSCT-TEEEEEE--CSCC---
T ss_pred hCC-CcEEEEeC-----cHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhccC-CcEEEEC--ccHHHHh
Confidence 997 58887753 4678998876777899999999999999999998864 3689998 8888875
No 34
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.84 E-value=2.5e-21 Score=180.07 Aligned_cols=122 Identities=19% Similarity=0.343 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHHHHhhcCC
Q 005183 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLSS 160 (710)
Q Consensus 81 ~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e~~~ 160 (710)
+++|+++||+.|++ +++||+||+++ .|++|||||+|++|++||++++++||||+||++||++|++.
T Consensus 8 ~~~Rl~~l~~~m~~--~~~da~li~~~------------~n~~YltGf~~~~~~~vv~~~~~~l~td~ry~~qa~~~~~~ 73 (132)
T 3ovk_A 8 LEQRLGHCLRQMAE--KGLEALLVTHL------------TNSYYLTGFSGTAATVLITAKRRVLITDSRYTLLAKASVEG 73 (132)
T ss_dssp HHHHHHHHHHHHHH--HTCCEEEECSH------------HHHHHHHCCCCSCCEEEEESSCEEEEECTTTHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHH--CCCCEEEEcCc------------ccceeeeCccCCCEEEEEECCccEEEECchhHHHHHHhCCC
Confidence 56899999999999 99999999997 69999999999999999999999999999999999999864
Q ss_pred cEEEEEcCCCCCCCHHHHHHHhcC--CCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHh
Q 005183 161 SWILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 227 (710)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~l~--~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~i 227 (710)
|+++..+ +..+++.+.+. ++++||||++ +|+..|++|++.++. ++++++ +++|+.+
T Consensus 74 -~~v~~~~-----~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l~~--~~~v~~--~~~v~~l 131 (132)
T 3ovk_A 74 -FDIIESR-----TPLKVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAELSG--ITLLAQ--SGFVEHL 131 (132)
T ss_dssp -CEEEECS-----CHHHHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHCTT--CEEEEE--SSTTGGG
T ss_pred -cEEEEeC-----CCHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhCCC--CeEEEC--chHHHHh
Confidence 7777643 22255555443 5689999999 999999999998864 599998 8999876
No 35
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.84 E-value=3.4e-21 Score=178.57 Aligned_cols=124 Identities=19% Similarity=0.294 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHHHHhhcC
Q 005183 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLS 159 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e~~ 159 (710)
+|++|+++||+.|++ +++||+||+++ .|++|||||+|++|+++|+.++++||||+||.+||++|++
T Consensus 3 ~~~~Rl~~lr~~m~~--~~~da~li~~~------------~ni~YltGf~~~~~~llv~~~~~~l~~d~r~~~~a~~~~~ 68 (131)
T 3il0_A 3 AMQRRLERFDAKLVQ--SGLDALLVTGQ------------NNIYYLTDFWGTNATVFITKNRRLFLTDSRYTLIAKQSVH 68 (131)
T ss_dssp CGGGHHHHHHHHHHH--HTCSEEEECSH------------HHHHHHHSCCCSSEEEEEESSCEEEEECTTSHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHH--cCCCEEEEecc------------cccEEEeCcccCCeEEEEECCCCEEEECchhHHHHHHhCC
Confidence 467899999999999 99999999997 6999999999999999999999999999999999999986
Q ss_pred CcEEEEEcCCCCCCCHHHHHHHhcCC--CCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 160 SSWILMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
.++++.. +++.++|.+.+.. .++||||+. +|+..|++|++.++ +++++++ +++|+.+.
T Consensus 69 -~~~v~~~-----~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~~--~~~~v~~--~~~v~~lR 128 (131)
T 3il0_A 69 -GFDIIES-----KDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIFE--GYTLSPQ--TNFMEELR 128 (131)
T ss_dssp -SSEEEEC-----SCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHTT--TSEEEEE--SSHHHHHH
T ss_pred -CcEEEEe-----CCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhcC--CCEEEEC--chHHHHhc
Confidence 4666653 4677888876643 379999999 99999999999885 4589998 99999874
No 36
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.78 E-value=3.4e-19 Score=165.49 Aligned_cols=122 Identities=12% Similarity=0.157 Sum_probs=103.2
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCce----EEEEeCC-ceEEEeCcccHHHHHhh
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEKQ 157 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g----~~vvt~~-~a~L~tD~RY~~qA~~e 157 (710)
+|+++||+.|++ +++||+||+++ .|++|||||+|++| .++|+.+ +++||||+||.+||+++
T Consensus 3 ~Rl~~l~~~m~~--~glDa~li~~~------------~ni~YlTGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~~ 68 (132)
T 3ooo_A 3 SKLNRIRHHLHS--VQAELAVFSDP------------VTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQS 68 (132)
T ss_dssp HHHHHHHHHHHH--TTCSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHH
T ss_pred hHHHHHHHHHHH--CCCCEEEEcCc------------chHHHHhCCCCCCCcceEEEEEeCCCCEEEEEeccchHHHHhc
Confidence 699999999999 99999999987 79999999999986 7888865 79999999999999998
Q ss_pred cCCcEEEEEcCCCCCCCHHHHHHHhcCCC--CeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHh
Q 005183 158 LSSSWILMRSGNHGVPTTFEWLNDVLAPG--GRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 227 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~i 227 (710)
+. +++.... +.+++.++|++.+... ++||||++++|+..|+.|++.++ .+++++ +++|+.+
T Consensus 69 ~~--~~v~~~~--d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~--~~~v~~l 131 (132)
T 3ooo_A 69 VP--FPVFGYI--DSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVFD---GHFENL--TPYIQNM 131 (132)
T ss_dssp CS--SCEEEEC--TTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHCC---SEEEEC--CHHHHTT
T ss_pred CC--CcEEEEe--CCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhCC---cceech--HHHHHhc
Confidence 72 3343322 2356789999887643 68999999999999999999875 489998 8888875
No 37
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.78 E-value=1.1e-19 Score=170.49 Aligned_cols=125 Identities=10% Similarity=0.128 Sum_probs=102.2
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCce----EEEEeCC-ceEEEeCcccHHHHHhh
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEKQ 157 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g----~~vvt~~-~a~L~tD~RY~~qA~~e 157 (710)
+|+++||+.|++ +++||+||+++ .|++|||||+|++| .+||+.+ +++||||+||.+||+++
T Consensus 4 ~Rl~~l~~~m~~--~glDa~li~~~------------~ni~YlTGf~~~~~er~~~llv~~~g~~~l~~~~~~~~~a~~~ 69 (140)
T 3i7m_A 4 TKLEQIQQWTAQ--HHASMTYLSNP------------KTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKET 69 (140)
T ss_dssp CHHHHHHHHHHH--TTCSEEEECCH------------HHHHHHHCCCCCCCSSCCEEEECSSSCCEEEEEGGGHHHHHTT
T ss_pred hHHHHHHHHHHH--cCCCEEEECCC------------CcceeecCCCCCCccceEEEEEeCCCCEEEEEecccHHHHHhc
Confidence 399999999999 99999999987 79999999999987 8888866 79999999999999998
Q ss_pred cCCcEEEEEcCCCCCCCHHHHHHHhcC----CCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEE-EccCcchHHHhh
Q 005183 158 LSSSWILMRSGNHGVPTTFEWLNDVLA----PGGRVGIDPFLFSSDAAEELKEAIAKKNHELV-YLYDLNLVDVIW 228 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~-~~~~~~lvd~iw 228 (710)
+.. .++.... +.+++.+++.+.+. ..++||||.+++|+..|+.|++.++. .+++ ++ +++|+++.
T Consensus 70 ~~~-~~i~~~~--d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l~~--~~~v~~~--~~~i~~lR 138 (140)
T 3i7m_A 70 GWQ-FPVIGYL--DHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFSA--PSFDLDI--TSFIEHMR 138 (140)
T ss_dssp TCC-SCEEEEC--TTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTSSS--CEEEEEC--HHHHHHC-
T ss_pred cCc-CcEEEEc--CCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHCCC--CEEecCH--HHHHHHHH
Confidence 753 2333221 22456666666553 44899999999999999999998764 5899 98 89998874
No 38
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.77 E-value=4.6e-19 Score=164.65 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=103.1
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCce----EEEEeCC-ceEEEeCcccHHHHHhh
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEKQ 157 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g----~~vvt~~-~a~L~tD~RY~~qA~~e 157 (710)
+|+++||+.|++ +++||+||+++ .|++|||||+|+++ .++|+.+ +++||||+||.+||+++
T Consensus 3 ~Rl~~l~~~m~~--~glDa~li~~~------------~ni~YltGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~~ 68 (132)
T 3o5v_A 3 AKLDQIRLYLDQ--KGAELAIFSDP------------VTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQA 68 (132)
T ss_dssp HHHHHHHHHHHH--TTCCEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHHH--CCCCEEEEcCc------------chhhHhhCCCCCCccceEEEEEeCCCCEEEEeehhhhHHHHhc
Confidence 699999999999 99999999987 69999999999986 8888876 89999999999999998
Q ss_pred cCCcEEEEEcCCCCCCCHHHHHHHhcCCC--CeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHh
Q 005183 158 LSSSWILMRSGNHGVPTTFEWLNDVLAPG--GRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 227 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~i 227 (710)
+. .++.... +.+++.++|.+.+... ++||||++++|+..|+.|++.++ .+++++ +++|+.+
T Consensus 69 ~~--~~i~~~~--d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~--~~~v~~l 131 (132)
T 3o5v_A 69 IS--FPVFGYV--DSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIFS---GQFNNL--TPYVQGM 131 (132)
T ss_dssp CC--SCEEEEC--TTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTCC---SEEEEC--HHHHHTC
T ss_pred CC--CcEEEEE--CCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhCC---Cceecc--HHHHHHh
Confidence 72 3333322 2456788998887643 58999999999999999998875 489997 8888865
No 39
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.76 E-value=8.4e-19 Score=163.82 Aligned_cols=125 Identities=14% Similarity=0.161 Sum_probs=105.5
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCce----EEEEeCC-ceEEEeCcccHHHHHh
Q 005183 82 DEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG----TAVVTKD-KAALWTDGRYFLQAEK 156 (710)
Q Consensus 82 ~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g----~~vvt~~-~a~L~tD~RY~~qA~~ 156 (710)
++|+++||+.|++ +++||+||+++ .|++|||||+|++| .++|+.+ +++||||+||.+||+
T Consensus 4 ~~Rl~~lr~~m~~--~~~da~li~~~------------~ni~yltGf~g~~~er~~~lli~~~g~~~l~~d~~~~~~a~- 68 (138)
T 3pn9_A 4 MSKLQQILTYLES--EKLDVAVVSDP------------VTINYLTGFYSDPHERQMFLFVLADQEPLLFVPALEVERAS- 68 (138)
T ss_dssp CCHHHHHHHHHHH--HTCSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHH-
T ss_pred HHHHHHHHHHHHH--CCCCEEEEcCc------------CceeeecCCCCCCccceEEEEEeCCCCEEEEEeccchhhhh-
Confidence 4699999999999 99999999987 59999999999986 8888877 999999999999999
Q ss_pred hcCCcEEEEEcCCCCCCCHHHHHHHhcCC--CCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 157 QLSSSWILMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 157 e~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
|+.. +++.... +.+++.+++.+.+.. +++||||++.+|+..|+.|++.++. .++++. +++|+.+.
T Consensus 69 ~~~~-~~v~~~~--~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~~~--~~~v~~--~~~i~~lR 135 (138)
T 3pn9_A 69 STVS-FPVVGYV--DSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVFET--AEFDNL--TPRIQRMR 135 (138)
T ss_dssp HHCS-SCEEEEC--TTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHSTT--CEEEEC--HHHHHHHT
T ss_pred ccCC-CcEEEEc--CCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHCCC--Ceeeeh--HHHHHHHh
Confidence 7653 4444322 235678899887754 5799999999999999999998864 589997 88998874
No 40
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.68 E-value=1.7e-16 Score=146.83 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 005183 252 VASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 331 (710)
Q Consensus 252 ~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l~~~~V~i 331 (710)
+.+|++++|+.|+++|+|++||+++.|++|||||+|++ ++++|+.+++.||+|. ++..++..++. ++++
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~~--------~~llv~~~~~~l~~d~-r~~~~a~~~~~--~~~v 72 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTDS-RYTLIAKQSVH--GFDI 72 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESSCEEEEECT-TSHHHHHHHCC--SSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccCC--------eEEEEECCCCEEEECc-hhHHHHHHhCC--CcEE
Confidence 46899999999999999999999999999999999976 7899999999999994 55566666653 5677
Q ss_pred eecccHHHHHHHHHhc--CCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCccccc
Q 005183 332 RPYNSILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFS 409 (710)
Q Consensus 332 ~~y~~i~~~l~~l~~~--~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~l 409 (710)
..|++..+.+.++... .++||+|.+ +++..++.|++.+ ++.+++++++++..+
T Consensus 73 ~~~~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~------------------------~~~~~v~~~~~v~~l 127 (131)
T 3il0_A 73 IESKDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIF------------------------EGYTLSPQTNFMEEL 127 (131)
T ss_dssp EECSCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHT------------------------TTSEEEEESSHHHHH
T ss_pred EEeCCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhc------------------------CCCEEEECchHHHHh
Confidence 7777777777665433 379999999 9999999998754 567889999999999
Q ss_pred cccC
Q 005183 410 KAVK 413 (710)
Q Consensus 410 RavK 413 (710)
|+||
T Consensus 128 R~iK 131 (131)
T 3il0_A 128 RMIK 131 (131)
T ss_dssp HC--
T ss_pred ccCC
Confidence 9998
No 41
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.67 E-value=4.4e-15 Score=160.87 Aligned_cols=125 Identities=26% Similarity=0.396 Sum_probs=106.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCceEEEEeCCceEEEeCcccHHHHHhhcC
Q 005183 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLS 159 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e~~ 159 (710)
++++||++||+.|++ +++||+||+++ .|++|||||+|++|++||++++++||||+||.+||+++++
T Consensus 2 ~~~~Rl~~lr~~m~~--~giDa~lI~~~------------~ni~YLtGf~g~~~~llvt~~~~~l~~d~r~~~~a~~~~~ 67 (356)
T 3q6d_A 2 NAMEKIERLRSAFDE--AGIDGILLTNE------------HSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAV 67 (356)
T ss_dssp CHHHHHHHHHTTHHH--HTCSEEEECCH------------HHHHHHHCCCSSSCEEEEESSCEEEEECGGGHHHHHHHST
T ss_pred cHHHHHHHHHHHHHH--cCCCEEEECCh------------hhceEccCCCCCCeEEEEECCCeEEEEChhhHHHHHhhCC
Confidence 578999999999999 99999999997 5999999999999999999999999999999999999986
Q ss_pred CcEEEEEcCCCCCCCHHHHHHHhcC--CCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 160 SSWILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~l~--~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
. +++.... .++.++|.+.+. +.++||||++.+|+..|+.|++.++. ++++. +++++.+.
T Consensus 68 ~-~~v~~~~----~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~~~---~~~~~--~~~~~~~R 128 (356)
T 3q6d_A 68 G-YEIVQHA----GLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAIDA---EFIPT--SGLVEKLR 128 (356)
T ss_dssp T-SEEEECS----SCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHCCS---EEEEE--CSHHHHHH
T ss_pred C-CEEEEeC----CCHHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhccc---ceecc--hhhhhhhc
Confidence 3 5665532 345566665543 45799999999999999999998753 78887 88888775
No 42
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.61 E-value=2.1e-15 Score=140.64 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=104.8
Q ss_pred ccccchhHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEe-CCceEEEEeCCCCCHHHHhh
Q 005183 245 LKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMDH 323 (710)
Q Consensus 245 ~~~ag~~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~-~~~~~Lfvd~~k~~~~~~~~ 323 (710)
..|+..++.+|++++|+.|+++|+|++||+++.|++|||||.|++ ++++|+ .++++||+| +++..++...
T Consensus 3 ~~~~~~~~~~Rl~~l~~~m~~~~~da~li~~~~n~~yltGf~~s~--------g~lvv~~~~~a~l~td-~Ry~~qA~~~ 73 (135)
T 3qoc_A 3 APLADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTGSN--------AALIINKDLSARISTD-GRYITQIAEQ 73 (135)
T ss_dssp CCCCCCHHHHHHHHHHHTHHHHTCSEEEECCHHHHHHHHCCCSSC--------CEEEEETTSCEEEEEC-GGGHHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHHCCCCEEEEcChhhCeeeecccCCC--------eEEEEeeCCccEEEeC-cHHHHHHHHh
Confidence 347788999999999999999999999999999999999999875 789999 899999999 5677777776
Q ss_pred hhcCCeEEeecccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCC-Cccccc
Q 005183 324 LKNAGVELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGG-PAGVFR 402 (710)
Q Consensus 324 l~~~~V~i~~y~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~ 402 (710)
++ ++++..+....+.+.+....+++||+|+..+++..++.|++.+ ++ .+++++
T Consensus 74 ~~--~~~i~~~~~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l------------------------~~~~~lv~~ 127 (135)
T 3qoc_A 74 VP--DIESLMARNCAPALLSDINGPKRVGFEADYLSVSQCEELRKSA------------------------GSDVELIPV 127 (135)
T ss_dssp CT--TSEEEECSSHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHS------------------------CTTEEEEEE
T ss_pred CC--CcEEEEeCcHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhc------------------------cCCcEEEEC
Confidence 64 4667667666566655333567899999999999999998753 23 578888
Q ss_pred CCcccccc
Q 005183 403 TSPIAFSK 410 (710)
Q Consensus 403 ~~~i~~lR 410 (710)
+++|..+|
T Consensus 128 ~~~v~~lR 135 (135)
T 3qoc_A 128 TGAIEKLR 135 (135)
T ss_dssp CSCC----
T ss_pred ccHHHHhC
Confidence 88888776
No 43
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.59 E-value=4.1e-14 Score=158.78 Aligned_cols=175 Identities=9% Similarity=0.125 Sum_probs=132.3
Q ss_pred CHHHHHHHHHHHhc--CCCCCccEEEEcCCCcc-cccccccccccceEecCCcCCceEEEEeCCceEEEeCcc---cHHH
Q 005183 80 APDEKLRALRELFS--RPGVNIDAYIIPSQDAH-QSEFIAECYMRRAYISGFTGSAGTAVVTKDKAALWTDGR---YFLQ 153 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~--~~~~~lDa~iI~~~D~h-~se~~~~~~~~~~ylTGFtGs~g~~vvt~~~a~L~tD~R---Y~~q 153 (710)
...+||++||+.|+ + +++||+||++.|+| +|+|+ .+++.++|||||+++.+++||+.++++||||+| |+.|
T Consensus 12 ~~~~Rl~~Lr~~m~~~~--~giDa~li~~~~~~~~~~y~-~~~~~~~yLtGf~~~~~~lvVt~d~~~L~~d~~~~~y~~~ 88 (467)
T 3biq_A 12 VFKKRIELLYSKYNEFE--GSPNSLLFVLGSSNAENPYQ-KTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQK 88 (467)
T ss_dssp HHHHHHHHHHHHGGGST--TCCSEEEEEECSCCTTSTTC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh--cCCCEEEEEcCCCCCCCCCc-cchhhhhHhhCCCCCCEEEEEECCeEEEEECCcchHHHHH
Confidence 35689999999999 9 99999999999998 69999 799999999999999999999999999999999 7889
Q ss_pred HHh--hcC--C-cEEEEEc--CCCC-CCCHHHHHHHhcCC-CCeEEEc-CCCCcHHHHHHHHHHHhh----CCCEEEEcc
Q 005183 154 AEK--QLS--S-SWILMRS--GNHG-VPTTFEWLNDVLAP-GGRVGID-PFLFSSDAAEELKEAIAK----KNHELVYLY 219 (710)
Q Consensus 154 A~~--e~~--~-~~~~~~~--~~~~-~~~~~~~l~~~l~~-~~~vG~d-~~~~s~~~~~~L~~~l~~----~~~~l~~~~ 219 (710)
|++ |+. . .++++.. ...+ .+.+.++|.+.+.. +++||++ ++.+|+..++.|++.|.. .+.++++.
T Consensus 89 a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~- 167 (467)
T 3biq_A 89 AIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDI- 167 (467)
T ss_dssp HHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEEC-
T ss_pred HhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhcccCCceeech-
Confidence 988 664 2 3666543 1100 01245677665532 5799995 688999999999998853 35689997
Q ss_pred CcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHH
Q 005183 220 DLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVD 265 (710)
Q Consensus 220 ~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e 265 (710)
.++|+.+|. -+++.-+--++.++.-...=+..+.+.++.
T Consensus 168 -~~~i~~lr~------iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~ 206 (467)
T 3biq_A 168 -SLGLSKVWE------VKDVNEQAFLSVSSKGSDKFMDLLSNEMVR 206 (467)
T ss_dssp -HHHHHHHTC------SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 899999994 234444444555555555555556666653
No 44
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.58 E-value=2.3e-15 Score=140.30 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEE
Q 005183 253 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVEL 331 (710)
Q Consensus 253 ~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~-~~~Lfvd~~k~~~~~~~~l~~~~V~i 331 (710)
.+|++++|+.|+++|+|++||++++|++|||||+|++.. . .++++|+.+ +++||+|.... .++. .. .++++
T Consensus 4 ~~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g~~~e-r---~~~lli~~~g~~~l~~d~~~~-~~a~-~~--~~~~v 75 (138)
T 3pn9_A 4 MSKLQQILTYLESEKLDVAVVSDPVTINYLTGFYSDPHE-R---QMFLFVLADQEPLLFVPALEV-ERAS-ST--VSFPV 75 (138)
T ss_dssp CCHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCCCCTT-S---CCEEEEESSSCCEEEEEGGGH-HHHH-HH--CSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCCCCcc-c---eEEEEEeCCCCEEEEEeccch-hhhh-cc--CCCcE
Confidence 469999999999999999999999999999999998743 2 267888776 89999995543 3454 33 34556
Q ss_pred eecc---cHHHHHHHHHh--cCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCcc
Q 005183 332 RPYN---SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 406 (710)
Q Consensus 332 ~~y~---~i~~~l~~l~~--~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i 406 (710)
..|. +..+.+.++.. +.++||+|++.+++..++.|++.+ |+.+++++++++
T Consensus 76 ~~~~~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~i 131 (138)
T 3pn9_A 76 VGYVDSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVF------------------------ETAEFDNLTPRI 131 (138)
T ss_dssp EEECTTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHS------------------------TTCEEEECHHHH
T ss_pred EEEcCCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHC------------------------CCCeeeehHHHH
Confidence 6664 34455555443 257899999999999999998753 567899999999
Q ss_pred ccccccC
Q 005183 407 AFSKAVK 413 (710)
Q Consensus 407 ~~lRavK 413 (710)
..+|+||
T Consensus 132 ~~lR~iK 138 (138)
T 3pn9_A 132 QRMRLIK 138 (138)
T ss_dssp HHHTTCC
T ss_pred HHHhhcC
Confidence 9999998
No 45
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.55 E-value=4.3e-14 Score=131.05 Aligned_cols=124 Identities=15% Similarity=0.235 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCCCCHHHHhhhhcCCeE
Q 005183 251 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVE 330 (710)
Q Consensus 251 ~~~~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k~~~~~~~~l~~~~V~ 330 (710)
.+.+|++++|+.|+++|+|++||+++.|++|||||+|++ +++|++.++++||+| .++..++...+. +.+
T Consensus 7 ~~~~Rl~~l~~~m~~~~~da~li~~~~n~~YltGf~~~~--------~~~vv~~~~~~l~td-~ry~~qa~~~~~--~~~ 75 (132)
T 3ovk_A 7 FLEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITD-SRYTLLAKASVE--GFD 75 (132)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESSCEEEEEC-TTTHHHHHHHCT--TCE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEcCcccceeeeCccCCC--------EEEEEECCccEEEEC-chhHHHHHHhCC--CcE
Confidence 367899999999999999999999999999999999875 788899999999999 566667766654 356
Q ss_pred EeecccHHHHHHHHHh--cCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCcccc
Q 005183 331 LRPYNSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAF 408 (710)
Q Consensus 331 i~~y~~i~~~l~~l~~--~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~ 408 (710)
+..|.+-.+.+.++.. ++++||+|.+ +++..++.|++.+ ++.++++++++|..
T Consensus 76 v~~~~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l------------------------~~~~~v~~~~~v~~ 130 (132)
T 3ovk_A 76 IIESRTPLKVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAEL------------------------SGITLLAQSGFVEH 130 (132)
T ss_dssp EEECSCHHHHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHC------------------------TTCEEEEESSTTGG
T ss_pred EEEeCCCHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhC------------------------CCCeEEECchHHHH
Confidence 6666543244444332 4789999999 9999999998753 46788999999888
Q ss_pred cc
Q 005183 409 SK 410 (710)
Q Consensus 409 lR 410 (710)
+|
T Consensus 131 lR 132 (132)
T 3ovk_A 131 LR 132 (132)
T ss_dssp GC
T ss_pred hC
Confidence 76
No 46
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.51 E-value=1.2e-12 Score=141.60 Aligned_cols=123 Identities=20% Similarity=0.319 Sum_probs=99.6
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccc-----eEecCCcCCceEEEEeCCceEEEeCcccHHHHHhh
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRR-----AYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQ 157 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~-----~ylTGFtGs~g~~vvt~~~a~L~tD~RY~~qA~~e 157 (710)
+|+++||+.|++ +++|++||++++ |+ +|||||+|+++++||++++++||||+||..||+++
T Consensus 2 ~Rl~~Lr~~m~~--~~lDa~li~~~~------------ni~~~~~~YLtGf~~~~~~llI~~~~~~L~~d~r~~~~a~~~ 67 (359)
T 2zsg_A 2 DRSERLIQLISE--EGIDAFLIMNIE------------NSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQE 67 (359)
T ss_dssp CCHHHHHHHHHT--TTCCEEEEEEST------------TTTHHHHHHHHCCCSSCEEEEEETTEEEEEECTTTHHHHHHH
T ss_pred hHHHHHHHHHHH--CCCcEEEEEChh------------HcccccCeeEeccCCCCEEEEEECCCCEEEECcccHHHHHhC
Confidence 589999999999 999999999873 67 99999999999999999999999999999999988
Q ss_pred cCCcEEEEEcCCCCCCCHHHHHHHhcC--CCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 158 LSSSWILMRSGNHGVPTTFEWLNDVLA--PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
. .++++... . ..+.++|.+.+. .+++||+|++.+++..++.|++.++. .+++++ +++|+.+.
T Consensus 68 -~-~~~v~~~~-~--~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l~~--~~~v~~--~~~i~~lr 131 (359)
T 2zsg_A 68 -T-DFEVREVK-G--GDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGD--RKFIGI--DDEVKQMR 131 (359)
T ss_dssp -C-CSEEEEC------CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHTTT--CEEEEC--HHHHHHHH
T ss_pred -C-CCEEEEec-C--cchHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhCCC--cEEEEC--hhhhhhhh
Confidence 4 46666531 1 112344444332 35799999999999999999887753 588997 88998886
No 47
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.2e-12 Score=146.30 Aligned_cols=178 Identities=8% Similarity=0.013 Sum_probs=134.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHHHhhC--------CCCCCCCc
Q 005183 406 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI---HNGAKLTEVDVADKLLEFRSKQS--------GFLDTSFD 474 (710)
Q Consensus 406 i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i---~~~~g~tE~ela~~l~~~~~~~~--------g~~~~sf~ 474 (710)
+..=+-+-+++-+..+|.|+.++..++..+..++..-. ..++|++-.|++...+.+..+.. ...|.+||
T Consensus 34 ~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFP 113 (614)
T 4b6a_t 34 LLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIP 113 (614)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEE
T ss_pred hhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccC
Confidence 33346688999999999999999999988876551110 01677888889877665543321 12357898
Q ss_pred eeEeeCCCCccccccCCCCC-------------------CcccCCCCeEEEecceeeCCeEeeeEeeeeCCC--------
Q 005183 475 TISGSGANGAIIHYKPEPGK-------------------CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE-------- 527 (710)
Q Consensus 475 ~iv~sG~n~a~~h~~p~~~~-------------------~~~l~~gd~vliD~g~~y~gy~tDitRT~~~G~-------- 527 (710)
|.++ .|....||.|.... +..|+.||+|.||+|++.+||.+|+++|++||.
T Consensus 114 T~IS--vN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~ 191 (614)
T 4b6a_t 114 TTID--IDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPIL 191 (614)
T ss_dssp EEEE--ETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTT
T ss_pred ceec--HHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccccc
Confidence 8776 56677899996432 347999999999999999999999999999984
Q ss_pred -----CCHHHHHHHHHHHHHHHHHHHcc----------------CCCCCChHHHHHHHHHHHHHcCCC-CcCcccccccc
Q 005183 528 -----PTAREKECFTRVLQGHIALDQAI----------------FPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGA 585 (710)
Q Consensus 528 -----pt~e~~~~y~~vl~a~~~~~~~i----------------~P~G~~~~~v~~~ar~~l~~~G~~-~~h~~GHGIG~ 585 (710)
.+....++..++..|.+++++.+ +| |++..+|-.++.++.+.+|+. ...-+||.|+.
T Consensus 192 ~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~-gvt~~~It~~IekvaksY~ck~Vegl~sH~i~r 270 (614)
T 4b6a_t 192 QPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSS-GITGQLIRTIVDTIARSYNCGVVPGSRVRRIRR 270 (614)
T ss_dssp TTTSCBCHHHHHHHHHHHHHHHHHHHHC----------------ST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEBT
T ss_pred cccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCC-CcchHHHHHHHHHHHhcCCcEEecccccccccc
Confidence 23445566667777777766655 88 999999999999999999985 55567999996
Q ss_pred C
Q 005183 586 A 586 (710)
Q Consensus 586 ~ 586 (710)
|
T Consensus 271 ~ 271 (614)
T 4b6a_t 271 F 271 (614)
T ss_dssp T
T ss_pred e
Confidence 5
No 48
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.40 E-value=4.3e-13 Score=125.44 Aligned_cols=126 Identities=14% Similarity=0.081 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEEee
Q 005183 255 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELRP 333 (710)
Q Consensus 255 Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~-~~~Lfvd~~k~~~~~~~~l~~~~V~i~~ 333 (710)
|++++|+.|+++|+|++||+++.|++|||||.|+. ..+| .+++|+.+ +++||+|. ++..++.+.... .++..
T Consensus 5 Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~-~er~---~~llv~~~g~~~l~~~~-~~~~~a~~~~~~--~~i~~ 77 (140)
T 3i7m_A 5 KLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDP-IERV---LALVVFPDQDPFIFAPA-LEVEVIKETGWQ--FPVIG 77 (140)
T ss_dssp HHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCC-CSSC---CEEEECSSSCCEEEEEG-GGHHHHHTTTCC--SCEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCcceeecCCCCCC-ccce---EEEEEeCCCCEEEEEec-ccHHHHHhccCc--CcEEE
Confidence 99999999999999999999999999999999874 1233 46778765 79999995 455556555432 34444
Q ss_pred cc---cHHHHHHHHHh----cCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCccc-ccCCc
Q 005183 334 YN---SILSEIKSLAA----QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGV-FRTSP 405 (710)
Q Consensus 334 y~---~i~~~l~~l~~----~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-d~~~~ 405 (710)
|. +..+.+.++.. ..++||+|.+.+++..++.|++.+ |+++++ ++++.
T Consensus 78 ~~d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l------------------------~~~~~v~~~~~~ 133 (140)
T 3i7m_A 78 YLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQF------------------------SAPSFDLDITSF 133 (140)
T ss_dssp ECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTS------------------------SSCEEEEECHHH
T ss_pred EcCCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHC------------------------CCCEEecCHHHH
Confidence 42 33444444332 348999999999999999998643 567888 99888
Q ss_pred cccccc
Q 005183 406 IAFSKA 411 (710)
Q Consensus 406 i~~lRa 411 (710)
|..+|+
T Consensus 134 i~~lR~ 139 (140)
T 3i7m_A 134 IEHMRG 139 (140)
T ss_dssp HHHC--
T ss_pred HHHHHc
Confidence 888885
No 49
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.40 E-value=6.2e-13 Score=123.04 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEEe
Q 005183 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELR 332 (710)
Q Consensus 254 ~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~-~~~Lfvd~~k~~~~~~~~l~~~~V~i~ 332 (710)
+|++++|+.|+++|+|++||+++.|++|||||+|+. ..+| .+++|+.+ +++||+|. ++..++.+.. +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~-~er~---~~l~v~~~g~~~l~~~~-~y~~~a~~~~---~~~v~ 74 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDP-HERQ---MFLFVYEDRDPILFVPA-LEVSRAKQSV---PFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCC-TTSC---CEEEEESSSCCEEEEEG-GGHHHHHHHC---SSCEE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCcchHHHHhCCCCCC-Ccce---EEEEEeCCCCEEEEEec-cchHHHHhcC---CCcEE
Confidence 699999999999999999999999999999999874 2233 36777765 79999995 4455555543 34455
Q ss_pred ecc---cHHHHHHHHHhc--CCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCccc
Q 005183 333 PYN---SILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIA 407 (710)
Q Consensus 333 ~y~---~i~~~l~~l~~~--~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~ 407 (710)
.|. +..+.+.+.... .++||+|.+.+++..++.|++.+ | .+++++++.|.
T Consensus 75 ~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~------------------------~-~~~~~~~~~v~ 129 (132)
T 3ooo_A 75 GYIDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF------------------------D-GHFENLTPYIQ 129 (132)
T ss_dssp EECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC------------------------C-SEEEECCHHHH
T ss_pred EEeCCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhC------------------------C-cceechHHHHH
Confidence 553 445566555432 35899999999999999998753 4 67888888887
Q ss_pred ccc
Q 005183 408 FSK 410 (710)
Q Consensus 408 ~lR 410 (710)
.+|
T Consensus 130 ~lR 132 (132)
T 3ooo_A 130 NMR 132 (132)
T ss_dssp TTC
T ss_pred hcC
Confidence 776
No 50
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.40 E-value=3.2e-13 Score=148.54 Aligned_cols=160 Identities=13% Similarity=0.059 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCc----eEEEEeCCceEEEeCcccHHHH
Q 005183 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVTKDKAALWTDGRYFLQA 154 (710)
Q Consensus 79 ~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~----g~~vvt~~~a~L~tD~RY~~qA 154 (710)
..+.+|+++||+.|++ +++||+||+++ .|++|||||+|+. +++||+.++++||||+||..||
T Consensus 22 ~e~~~Rl~~Lr~~m~~--~~lDa~li~~~------------~ni~yltgf~~s~~~~p~~llV~~~~~~l~~~~~~~~~a 87 (402)
T 1kp0_A 22 AEMTRRZBRLRAWMAK--SBIDAVLFTSY------------HNINYYSGWLYCYFGRKYAZVIBZVKAVTISKGIDGGMP 87 (402)
T ss_dssp HHHHHHHHHHHHHHHH--HTCSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHH
T ss_pred HHHHHHHHHHHHHHHH--CCCCEEEEcCC------------CCceEecCCCCCCCCceEEEEEeCCCCEEEeccchhhhh
Confidence 3467899999999999 99999999986 5899999999863 7899999999999999999999
Q ss_pred HhhcCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCC
Q 005183 155 EKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPK 234 (710)
Q Consensus 155 ~~e~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~ 234 (710)
.+++.. ..+..... ..+.+.++|.+.+..+++||+|++.+++..++.|++.++ +.+++++ .++|+.+.
T Consensus 88 ~~~~~~-~~v~~~~~-~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l~--~~~~v~~--~~~i~~lR------ 155 (402)
T 1kp0_A 88 WRRSFG-BNIVYTDW-KRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALP--GTEFVDV--GZPVMWZR------ 155 (402)
T ss_dssp HHHCSS-EEEEECSS-STTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHST--TCEEEEC--HHHHHHHH------
T ss_pred HHhccC-cceEeccc-cccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhCC--CCEEEEC--HHHHHHHH------
Confidence 887654 22322111 123567899888777789999999999999999988775 3589997 89999885
Q ss_pred CCCCccccccccccchhHHHHHHHHHHHHH
Q 005183 235 PPNKPIRVHALKYAGLDVASKLSSLRSDLV 264 (710)
Q Consensus 235 ~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~ 264 (710)
.-+++.-+-.++.++.-...-++++.+.++
T Consensus 156 ~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~ 185 (402)
T 1kp0_A 156 VIKSSEEZBLIRZGARISDIGGAATAAAIS 185 (402)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234555555555555555555555555554
No 51
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.39 E-value=5e-13 Score=123.76 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchhhhhcCCCCCCCCCCceeEEEEEEeCC-ceEEEEeCCCCCHHHHhhhhcCCeEEe
Q 005183 254 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELR 332 (710)
Q Consensus 254 ~Kl~~lr~~L~e~glDallis~~dnIaYLtg~rg~di~~~Pv~~a~liV~~~-~~~Lfvd~~k~~~~~~~~l~~~~V~i~ 332 (710)
+|++++|+.|+++|+|++||+++.|++|||||+|+.. .+| ++++|+.+ +++||+|. ++..++.+.. +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YltGf~~~~~-er~---~~l~v~~~g~~~l~~~~-~y~~~a~~~~---~~~i~ 74 (132)
T 3o5v_A 3 AKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPH-ERQ---LFLFVYHDLAPVLFVPA-LEVARASQAI---SFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCT-TSC---CEEEEESSSCCEEEEEG-GGHHHHHHHC---CSCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCcchhhHhhCCCCCCc-cce---EEEEEeCCCCEEEEeeh-hhhHHHHhcC---CCcEE
Confidence 6999999999999999999999999999999998752 223 47888765 79999995 4555555544 34455
Q ss_pred ecc---cHHHHHHHHHhc--CCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCCCcccccCCccc
Q 005183 333 PYN---SILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIA 407 (710)
Q Consensus 333 ~y~---~i~~~l~~l~~~--~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~ 407 (710)
.|. +..+.+.+.... .++||+|.+.+++..++.|++.+ | ++++++++.|.
T Consensus 75 ~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~------------------------~-~~~~~~~~~v~ 129 (132)
T 3o5v_A 75 GYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIF------------------------S-GQFNNLTPYVQ 129 (132)
T ss_dssp EECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTC------------------------C-SEEEECHHHHH
T ss_pred EEECCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhC------------------------C-CceeccHHHHH
Confidence 553 344555554432 35899999999999999987632 4 67788888777
Q ss_pred ccc
Q 005183 408 FSK 410 (710)
Q Consensus 408 ~lR 410 (710)
.+|
T Consensus 130 ~lR 132 (132)
T 3o5v_A 130 GMR 132 (132)
T ss_dssp TC-
T ss_pred HhC
Confidence 765
No 52
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.35 E-value=5.1e-11 Score=129.89 Aligned_cols=128 Identities=9% Similarity=0.041 Sum_probs=102.2
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCc----eEEEEeCC-ceEEEeCcccHHH
Q 005183 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSA----GTAVVTKD-KAALWTDGRYFLQ 153 (710)
Q Consensus 79 ~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~----g~~vvt~~-~a~L~tD~RY~~q 153 (710)
..+.+|+++||+.|++ +++||+||+++ .|++|||||+++. +.++|+.+ +++|+||.+|..+
T Consensus 13 ~e~~~R~~~l~~~m~~--~g~da~li~~~------------~ni~YltG~~~~~~~r~~~l~v~~~g~~~l~~~~~~~~~ 78 (378)
T 4ege_A 13 AVYARRLAAAAAATEQ--AGLAGLVITPG------------YDLRYLIGSRADTFERLTALVLPASGVPTIVLPRLELAS 78 (378)
T ss_dssp HHHHHHHHHHHHHHHH--TTCSEEEECSS------------HHHHHHHCCCCCCSSSCCEEEEESSSCCEEEEEGGGGGG
T ss_pred HHHHHHHHHHHHHHHH--cCCCEEEECCc------------chhHHhhCCCCCCCcceEEEEEEeCCcEEEEEChhhHHH
Confidence 4567899999999999 99999999997 6999999999975 67888765 7999999999999
Q ss_pred HHhhc-C-CcEEEEEcCCCCCCCHHHHHHHhcCCC-CeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 154 AEKQL-S-SSWILMRSGNHGVPTTFEWLNDVLAPG-GRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 154 A~~e~-~-~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
++++. + ..+.+... .+..++.+.+.+.+..+ ++||+| ..+++..++.|++.+ . .++++. +++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~-~--~~~~~~--~~~i~~~R 148 (378)
T 4ege_A 79 LKESAASDLGVCVRDW--VDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL-G--VLPVLA--TDVLRQLR 148 (378)
T ss_dssp GGTSSTTTTTCEEEEE--CTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH-T--SCCEES--HHHHHHHH
T ss_pred HHhcccCCCCeEEEEe--cCCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc-C--CeEEEc--HHHHHHHH
Confidence 98873 2 22444332 22345677787776544 689999 679999999999988 3 578887 88888775
No 53
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.27 E-value=3.9e-12 Score=147.20 Aligned_cols=157 Identities=11% Similarity=0.101 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHcC-----CCEEEEcc------------cchhhhhcCCCCCCCCCCceeEEEEEEeCCceEEEEeCCC
Q 005183 253 ASKLSSLRSDLVDAG-----SSAIVISM------------LDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSK 315 (710)
Q Consensus 253 ~~Kl~~lr~~L~e~g-----lDallis~------------~dnIaYLtg~rg~di~~~Pv~~a~liV~~~~~~Lfvd~~k 315 (710)
.+|+++||+.|+++| +||+||++ ..|++|||||.|+. +++||+.+++.||+| ++
T Consensus 7 ~~Rl~~LR~~m~~~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSa--------G~~vVt~~~a~l~tD-gR 77 (623)
T 3ctz_A 7 SELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA--------GTAIITEEHAAMWTD-GR 77 (623)
T ss_dssp HHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSC--------CEEEEESSCEEEEEC-GG
T ss_pred HHHHHHHHHHHHhcCCCCCceeEEEECCCCccccccccchhccceeccCcCCCc--------eEEEEecCeeEEEEC-cH
Confidence 679999999999999 99999999 88999999999986 899999999999999 67
Q ss_pred CCHHHHhhhhcCCeEEeec-----ccHHHHHHHHHhcCCEEEEeCCCCcHHHHHHHHHHHHHHhhhccccccccccccCC
Q 005183 316 VTPDVMDHLKNAGVELRPY-----NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDT 390 (710)
Q Consensus 316 ~~~~~~~~l~~~~V~i~~y-----~~i~~~l~~l~~~~~~i~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 390 (710)
+..++.+++. .++++... ..+.+.|.+....+++||+|+..+++..++.|++.+..
T Consensus 78 Y~~QA~~ql~-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~------------------ 138 (623)
T 3ctz_A 78 YFLQAAKQMD-SNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRS------------------ 138 (623)
T ss_dssp GHHHHHHHBC-TTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHhcC-CceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHh------------------
Confidence 8888888885 35666542 35677787765568999999999999999999987632
Q ss_pred CCCCCCCccccc-CCccccc---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005183 391 TGQSGGPAGVFR-TSPIAFS---KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI 443 (710)
Q Consensus 391 ~~~~~~~~~vd~-~~~i~~l---RavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i 443 (710)
.+.++++. .++|..+ |.+|+++| .++.+..+++.++..-++.+++.+
T Consensus 139 ----~~~~lv~~~~~lvd~iw~~Rp~k~~~e--~~~~~~~~ag~~~~~rl~~lr~~m 189 (623)
T 3ctz_A 139 ----AGHHLIPVKENLVDKIWTDRPERPCKP--LLTLGLDYTGISWKDKVADLRLKM 189 (623)
T ss_dssp ----TTCEEEECSSCHHHHHCTTCCCCCCCC--CEECCHHHHSSCHHHHHHHHHHHH
T ss_pred ----cCCEEEecCCCcHHHHhhcCCCCCchh--hhhcchhhcChhHHHHHHHHHHHH
Confidence 24567888 5899999 99999999 888888888888776666664444
No 54
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.25 E-value=7.9e-10 Score=120.39 Aligned_cols=133 Identities=9% Similarity=0.156 Sum_probs=99.0
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCce-----EEEEeCCceEEEeCcccH
Q 005183 77 TQDAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG-----TAVVTKDKAALWTDGRYF 151 (710)
Q Consensus 77 ~~~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g-----~~vvt~~~a~L~tD~RY~ 151 (710)
.+|++.+|+++||+.|++ +++||+||+++ .|++|||||++... +++++.+...++++.|+.
T Consensus 11 ~~~Ey~~Rl~rlr~~m~~--~glDalli~~~------------~ni~YLTG~~~~~~~~~~~~lvv~~~g~~~~~~~~~~ 76 (377)
T 4fkc_A 11 GSMDYKRRIHKFQAHFGK--KGFEGALVAPG------------SNFYYLTGFNPLGTLERLFVLILPSEGLLTAIAPRLY 76 (377)
T ss_dssp SSSCHHHHHHHHHHHHHH--TTCCEEEECSS------------HHHHHHHSCCCCCCSSSCCEEEEESSSCCEEEEEGGG
T ss_pred chHHHHHHHHHHHHHHHH--CCCCEEEECCC------------hhheeecCCCCCCCCcceEEEEEcCCCcEEEEeccch
Confidence 379999999999999999 99999999987 59999999987653 567777665566666777
Q ss_pred HHHHhhcCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 152 LQAEKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 152 ~qA~~e~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
.++.++.................+.+.|.+....+++||+|. .+++..+.+|++.++. .+++++ +++|+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d~-~~~~~~~~~l~~~~~~--~~~~d~--~~~i~~lR 148 (377)
T 4fkc_A 77 EKELEEFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDD-TMPVGVFLKAKDIFDK--YSLHPI--SPVISELR 148 (377)
T ss_dssp HHHHTTCSSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEECT-TSCHHHHHHTHHHHTT--SEEEES--HHHHHHHH
T ss_pred HHHHHhcCCCEEEeccccCHHHHHHHHHHHhhhccceeeeec-cccHHHHHHHHhhCCC--CeEEEh--HHHHHHHH
Confidence 777666654432222221111123345555556778999994 6899999999999875 489998 88888875
No 55
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=99.13 E-value=2.9e-09 Score=114.82 Aligned_cols=119 Identities=21% Similarity=0.234 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCCce-E-EEEeCCceEEEeCcccHHHHHhhcC
Q 005183 82 DEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAG-T-AVVTKDKAALWTDGRYFLQAEKQLS 159 (710)
Q Consensus 82 ~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs~g-~-~vvt~~~a~L~tD~RY~~qA~~e~~ 159 (710)
.+|+++||+.|++ +++|+++|+++ .|++|||||+++.+ + ++|+.++..|++|.++ .+| ++.+
T Consensus 5 ~~R~~~l~~~m~~--~~~da~li~~~------------~n~~yltg~~~~~~~~~llv~~~~~~l~~~~~~-~~~-~~~~ 68 (351)
T 1wy2_A 5 NEKVKKIIEFMDK--NSIDAVLIAKN------------PNVYYISGASPLAGGYILITGESATLYVPELEY-EMA-KEES 68 (351)
T ss_dssp CHHHHHHHHHHHH--TTCSEEEECSH------------HHHHHHHSCCCSSCCEEEEETTEEEEEEEHHHH-HHH-HHHC
T ss_pred HHHHHHHHHHHHH--CCCCEEEECCC------------CCceEecCCCCCCCcEEEEEECCCcEEEECchH-HHH-hhcC
Confidence 5899999999999 99999999987 59999999999876 6 8889989999999999 888 4443
Q ss_pred CcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 160 SSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
.+++.... . .+.+.+.+.+.++||+| ..+++..++.|++.++ ..++++. +++++.+.
T Consensus 69 -~~~v~~~~-----~-~~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~~--~~~~~~~--~~~i~~~r 125 (351)
T 1wy2_A 69 -NIPVEKFK-----K-MDEFYKALEGIKSLGIE-SSLPYGFIEELKKKAN--IKEFKKV--DDVIRDMR 125 (351)
T ss_dssp -SSCEEEES-----S-HHHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHSC--CCEEEEC--HHHHHHHH
T ss_pred -CCeEEEeC-----c-HHHHHHHHccCCEEEEc-CcCCHHHHHHHHhhCC--CCeEEEc--HHHHHHHH
Confidence 23333221 1 34455555555799999 8999999999988764 2478887 88888775
No 56
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=98.94 E-value=4.8e-08 Score=105.51 Aligned_cols=119 Identities=14% Similarity=0.161 Sum_probs=88.9
Q ss_pred HHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCC-----ceEEEEeCCc-eEEEeCcccHHHHHh
Q 005183 83 EKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS-----AGTAVVTKDK-AALWTDGRYFLQAEK 156 (710)
Q Consensus 83 ~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs-----~g~~vvt~~~-a~L~tD~RY~~qA~~ 156 (710)
+|+++||+.|++ +++|+++|+++ .|++|||||.+. .++++|+.++ ++||+|.+|..+++.
T Consensus 1 ~R~~~l~~~m~~--~~~d~~li~~~------------~n~~yltG~~~~~~~~~~~~l~i~~~~~~~l~~~~~~~~~~~~ 66 (356)
T 1wn1_A 1 MRLEKFIHLLGE--RGFDGALISPG------------TNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNN 66 (356)
T ss_dssp CHHHHHHHHHHH--TTCSEEEECSS------------HHHHHHHCCCCSCCTTSCCEEEEETTSCEEEEEEGGGTTTTTT
T ss_pred CHHHHHHHHHHH--CCCcEEEECCC------------ccceeecCCcCCCCCCceEEEEEeCCCcEEEEECcccHHHhhC
Confidence 389999999999 99999999987 599999999854 4788888775 999999999887655
Q ss_pred hcCCcEEEEEcCCCCCCCHHHHHHHhcC----CCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 157 QLSSSWILMRSGNHGVPTTFEWLNDVLA----PGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 157 e~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
. ++... .+.....+.|.+.+. ..++||+| ..+++..++.|++. + +.+++++ +++++.+.
T Consensus 67 ---~--~v~~~--~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~-~--~~~~~~~--~~~i~~~R 129 (356)
T 1wn1_A 67 ---F--PATFW--HDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL-G--KFTFQPL--SSLIKELR 129 (356)
T ss_dssp ---S--CEEEE--CTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG-S--CEEEEET--HHHHHHHH
T ss_pred ---C--eEEEE--cCCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC-C--CCeEEEc--HHHHHHHH
Confidence 1 22221 112233444444332 45789999 88999999998765 2 4588887 88888775
No 57
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=98.83 E-value=3.9e-09 Score=117.93 Aligned_cols=126 Identities=11% Similarity=0.026 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcC--------CceEEEEeCCceEEEeCcccH
Q 005183 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTG--------SAGTAVVTKDKAALWTDGRYF 151 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtG--------s~g~~vvt~~~a~L~tD~RY~ 151 (710)
...+||++||+.|++ +++||+||+++ .|++|||||+| +.+++||+.+++.+|+|.||.
T Consensus 78 ~~~~Rl~rlr~~m~~--~glDalli~~~------------~ni~YlTGf~g~~~~~~~~~~~~llV~~dg~~~l~d~r~~ 143 (470)
T 4b28_A 78 MRRFRHRRLTDHVVA--RGYAGLLMFDP------------LNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNS 143 (470)
T ss_dssp HHHHHHHHHHHHHHH--TTCSEEEECSH------------HHHHHHHCCCSSHHHHHHSCCCEEEEETTSCEEEECCTTC
T ss_pred HHHHHHHHHHHHHHH--cCCCEEEEcCC------------CcceeecCCCCCcccccCCCCEEEEEECCCCEEEEecchh
Confidence 346899999999999 99999999998 69999999998 468899999988999999985
Q ss_pred HHHHhhcCCcEEEEEcCCC------CC----------CCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEE
Q 005183 152 LQAEKQLSSSWILMRSGNH------GV----------PTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHEL 215 (710)
Q Consensus 152 ~qA~~e~~~~~~~~~~~~~------~~----------~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l 215 (710)
.......+.--++. .... +. ..+.++|++.....++||||.. ++..++.|++ .++++
T Consensus 144 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~----~~~~~ 216 (470)
T 4b28_A 144 PFLSEFNPLVREQR-AGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA----QGFEI 216 (470)
T ss_dssp GGGGTTCTTSCEEE-CCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH----TTCEE
T ss_pred hhhhhhhhHHHHHH-hcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHc----CCCEE
Confidence 43321111000111 1100 00 0123445554334689999984 6777888766 25699
Q ss_pred EEccCcchHHHhh
Q 005183 216 VYLYDLNLVDVIW 228 (710)
Q Consensus 216 ~~~~~~~lvd~iw 228 (710)
++. +++|+.+.
T Consensus 217 vd~--~~~v~~lR 227 (470)
T 4b28_A 217 MDG--EEVTEKAR 227 (470)
T ss_dssp EEH--HHHHHHHH
T ss_pred EEc--HHHHHHHH
Confidence 998 88998885
No 58
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=98.82 E-value=6.8e-09 Score=115.48 Aligned_cols=144 Identities=10% Similarity=0.095 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHhcCC------CCCccEEEEcCCCccccccccccccc---ceEecCCcCCceEEEEeCCceEEEeCcc-
Q 005183 80 APDEKLRALRELFSRP------GVNIDAYIIPSQDAHQSEFIAECYMR---RAYISGFTGSAGTAVVTKDKAALWTDGR- 149 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~~~------~~~lDa~iI~~~D~h~se~~~~~~~~---~~ylTGFtGs~g~~vvt~~~a~L~tD~R- 149 (710)
.+.+|+++||+.|++. -+++|++||++.|++ |+. ...++ ++|||||+++.+++|+++++++||||++
T Consensus 12 ~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d--~~~-~y~q~~~~~~yLtG~~~~~~~lvi~~~~~~l~~~~~~ 88 (444)
T 3cb6_A 12 TFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHD--DTN-PYQKSTALHTWLLGYEFPSTLILLEKHRITILTSVNK 88 (444)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCC--TTC-CCCHHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHH
T ss_pred HHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCC--CCC-CcccchhhhHHHhCCCCCCEEEEEeCCcEEEEEcCch
Confidence 3568999999999830 158999999988752 111 11122 7999999999999999999999999997
Q ss_pred --cHHHHH-hhcCC-cEEEEEc-CCCCCC-CHHHHHHHhcC-CCCeEEEcC-CCCcHHHHHHHHHHHhh--CCCEEEEcc
Q 005183 150 --YFLQAE-KQLSS-SWILMRS-GNHGVP-TTFEWLNDVLA-PGGRVGIDP-FLFSSDAAEELKEAIAK--KNHELVYLY 219 (710)
Q Consensus 150 --Y~~qA~-~e~~~-~~~~~~~-~~~~~~-~~~~~l~~~l~-~~~~vG~d~-~~~s~~~~~~L~~~l~~--~~~~l~~~~ 219 (710)
|.+|++ .++.. .+++... .....+ ...+.+.+.+. .+++||+++ +.++...+..+.+.+.. .+.+++++
T Consensus 89 ~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~- 167 (444)
T 3cb6_A 89 ANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDA- 167 (444)
T ss_dssp HTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEEC-
T ss_pred HHHHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhhccCCceEeec-
Confidence 788988 66543 3444432 110000 12344444442 357899987 77888888888887743 24589997
Q ss_pred CcchHHHhh
Q 005183 220 DLNLVDVIW 228 (710)
Q Consensus 220 ~~~lvd~iw 228 (710)
.++|+.+.
T Consensus 168 -~~~i~~~r 175 (444)
T 3cb6_A 168 -SLGLAKCL 175 (444)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHHH
Confidence 88888876
No 59
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=98.77 E-value=1.9e-08 Score=110.44 Aligned_cols=131 Identities=19% Similarity=0.129 Sum_probs=100.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccEEEEcCCCcccccccccccccceEecCCcCC----ceEEEEeCCceEEEeCcccHHHH
Q 005183 79 DAPDEKLRALRELFSRPGVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGS----AGTAVVTKDKAALWTDGRYFLQA 154 (710)
Q Consensus 79 ~~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~se~~~~~~~~~~ylTGFtGs----~g~~vvt~~~a~L~tD~RY~~qA 154 (710)
..+.+|+++||+.|++ +++||+||+++ .|++|||||..+ ...++|+.++++|++|++|..++
T Consensus 21 ~e~~~R~~~l~~~m~~--~~~da~li~~~------------~ni~yltg~~~~~~~~~~~llv~~~~~~l~~~~~~~~~~ 86 (401)
T 1chm_A 21 QEYANRQARLRAHLAA--ENIDAAIFTSY------------HNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQP 86 (401)
T ss_dssp HHHHHHHHHHHHHHHH--TTCSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHH
T ss_pred HHHHHHHHHHHHHHHH--CCCCEEEEeCc------------ccceeeCCCCcCCCCCeEEEEEecCCCEEEecccchhhH
Confidence 4467899999999999 99999999987 489999999753 24677888889999999998886
Q ss_pred HhhcCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhh
Q 005183 155 EKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 155 ~~e~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw 228 (710)
.++......+..... ....+.+.|.+.+...++||+|++.+++..++.|++.++. .+++++ .+++..+.
T Consensus 87 ~~~~~~~~~v~~~~~-~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~~~--~~~~~~--~~~i~~~R 155 (401)
T 1chm_A 87 WRRTVGTDNIVYTDW-QRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYPD--AELVDV--AAACMRMR 155 (401)
T ss_dssp HHHCCSSEEEEECTT-STTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCTT--CEEEEC--HHHHHHHH
T ss_pred HHhhcccceeeeccc-cccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhCCC--CEEEEh--HHHHHHHH
Confidence 554332122222111 1234677888776556799999999999999999887654 488887 88888775
No 60
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=98.34 E-value=3.9e-05 Score=84.99 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccEEEEcCCCcccc---cccccccccceEecCCcCCceEEEEeC-----CceEEEeCcccH
Q 005183 80 APDEKLRALRELFSRPGVNIDAYIIPSQDAHQS---EFIAECYMRRAYISGFTGSAGTAVVTK-----DKAALWTDGRYF 151 (710)
Q Consensus 80 ~~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h~s---e~~~~~~~~~~ylTGFtGs~g~~vvt~-----~~a~L~tD~RY~ 151 (710)
.+.+|+++||+.|++ ++ +++|+++++...+ +|.=..+.|++|||||+...++++++. ++++||+|.++.
T Consensus 7 e~~~R~~~l~~~m~~--~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~~~~lvi~~~~~~~~~~~Lf~~~~~~ 83 (440)
T 2v3z_A 7 EFQRRRQALVEQMQP--GS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDL 83 (440)
T ss_dssp HHHHHHHHHHHHSCS--SE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCH
T ss_pred HHHHHHHHHHHhccc--CC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCCCEEEEEEecCCCCceEEEEecCCCc
Confidence 356899999999999 77 7888887642222 222223579999999999888888875 478999988764
Q ss_pred HH-----------H-HhhcCCcEEEEEcCCCCCCCHHHHHHHhcCCCCeEEEcCCCC------cHHHHHHHHHHHhh---
Q 005183 152 LQ-----------A-EKQLSSSWILMRSGNHGVPTTFEWLNDVLAPGGRVGIDPFLF------SSDAAEELKEAIAK--- 210 (710)
Q Consensus 152 ~q-----------A-~~e~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~------s~~~~~~L~~~l~~--- 210 (710)
.+ + .+....+ .+.. ...+.++|.+.+...++|+++.... +...++.+.+.+..
T Consensus 84 ~~~~w~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 157 (440)
T 2v3z_A 84 TAEIWFGRRLGQDAAPEKLGVD-RALA-----FSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLT 157 (440)
T ss_dssp HHHHHHCCCCHHHHHHHHHTCS-EEEE-----GGGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTCGGGTCC
T ss_pred ccceecCCCCCHHHHHHhcCCC-EEee-----HHHHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhhhcccccC
Confidence 43 2 2222211 1222 2356777877665567999988642 23344444433221
Q ss_pred CCCEEEEccCcchHHHhh
Q 005183 211 KNHELVYLYDLNLVDVIW 228 (710)
Q Consensus 211 ~~~~l~~~~~~~lvd~iw 228 (710)
.+.+++++ .++++.+.
T Consensus 158 ~~~~~~~~--~~~i~~~R 173 (440)
T 2v3z_A 158 APATMIDW--RPVVHEMR 173 (440)
T ss_dssp CCSEEECC--HHHHHHHH
T ss_pred CcceeeeH--HHHHHHHH
Confidence 23578887 77887764
No 61
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=98.18 E-value=0.00014 Score=80.10 Aligned_cols=135 Identities=8% Similarity=0.012 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhcCCCCCccEEEEcCCCcc----cccccccccccceEecCCcCCceEEEEeCC----ceEEEe------
Q 005183 81 PDEKLRALRELFSRPGVNIDAYIIPSQDAH----QSEFIAECYMRRAYISGFTGSAGTAVVTKD----KAALWT------ 146 (710)
Q Consensus 81 ~~~Rl~~Lr~~m~~~~~~lDa~iI~~~D~h----~se~~~~~~~~~~ylTGFtGs~g~~vvt~~----~a~L~t------ 146 (710)
+.+|.++|.+.|.+ .+ .+|+++.+.. -.+|.=..+.|.+|||||++.++++|++.+ +.+||+
T Consensus 6 ~~~RR~~l~~~l~~--~~--~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~~lfv~~~~~~ 81 (427)
T 3ig4_A 6 FAQNRERLVNTLPD--ES--ITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPV 81 (427)
T ss_dssp HHHHHHHHHTTSCS--SE--EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEEEEEECCCCTT
T ss_pred HHHHHHHHHHhCcC--CC--EEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCCEEEEEEccCCCceEEEEecCCCcc
Confidence 56889999988887 53 4455555331 134555666899999999999999888652 344444
Q ss_pred -----CcccHHHHHhhcCCcEEEEEcCCCCCCCHHHHHHHhcCC--CCeEEEcCC--------CCcHHHHHHHHHHHhhC
Q 005183 147 -----DGRYFLQAEKQLSSSWILMRSGNHGVPTTFEWLNDVLAP--GGRVGIDPF--------LFSSDAAEELKEAIAKK 211 (710)
Q Consensus 147 -----D~RY~~qA~~e~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~vG~d~~--------~~s~~~~~~L~~~l~~~ 211 (710)
+.||..|+.++...--.+... .++.+.|.+.+.. .++|+++.. .+++..++.|++.++.
T Consensus 82 ~~~w~g~r~~~~~a~~~~~~~~v~~~-----~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 155 (427)
T 3ig4_A 82 MEKWVGKTVSNEEAEKISGIKKVIYL-----DSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYPH- 155 (427)
T ss_dssp GGGTTCCCCCHHHHHHHHCCSEEEEG-----GGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCTT-
T ss_pred ceEEeCCCCcHHHHHhcCCCCEEEEh-----hhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCCC-
Confidence 478988887765431123322 3567777776654 679999864 3567888999888764
Q ss_pred CCEEEEccCcchHHHhh
Q 005183 212 NHELVYLYDLNLVDVIW 228 (710)
Q Consensus 212 ~~~l~~~~~~~lvd~iw 228 (710)
.+++++ .++++.+.
T Consensus 156 -~~~~~~--~~~i~~lR 169 (427)
T 3ig4_A 156 -VTIGNV--YPNICELR 169 (427)
T ss_dssp -CEEEEC--HHHHHHHH
T ss_pred -CeEeEh--HHHHHHHH
Confidence 489998 88888875
No 62
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=95.32 E-value=0.036 Score=59.42 Aligned_cols=96 Identities=10% Similarity=0.007 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCC-cCccccccccCCcc-----ccCCCcccccCCCCc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-RHGTGHGVGAALNV-----HEGPQSISFRYGNMT 604 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~-~h~~GHGIG~~l~v-----hE~P~~i~~~~~~~~ 604 (710)
.+|++-+++.+++..+.+.++| |++-.||++.+.+.+.+.|..- ..+.|+.++ +.+ |--|. . ..++.
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikp-G~t~~el~~~~e~~i~~~~~~~~~~g~~FP~c--iSvN~~v~Hg~P~---~-~~~~~ 119 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAG--MSMNSCAAHYTVN---P-GEQDI 119 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEE--EEETTEEECCCCC---T-TCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHhcCCCcccCCCCCcE--EeeCCEEEecCCC---C-CCCCe
Confidence 4688889999999999999999 9999999999999998877531 122233222 222 33332 0 11567
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|++|.++.|.-|.+.+|..|- +-.|+.|
T Consensus 120 ~L~~GDiV~ID~G~~~dGY~sD-~arT~~v 148 (358)
T 3fm3_A 120 VLKEDDVLKIDFGTHSDGRIMD-SAFTVAF 148 (358)
T ss_dssp BCCTTCEEEEEEEEEETTEEEE-EEEEEEC
T ss_pred EecCCCEEEEEeeEEECCEEEE-EEEeccc
Confidence 8999999999999998876543 3344444
No 63
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=93.90 E-value=0.037 Score=61.94 Aligned_cols=71 Identities=10% Similarity=0.014 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHhcCCCCC----ccEEEEcCCCc-----ccccccccccccceEecCCcCCceEEEEe--CCceEEEeC
Q 005183 79 DAPDEKLRALRELFSRPGVN----IDAYIIPSQDA-----HQSEFIAECYMRRAYISGFTGSAGTAVVT--KDKAALWTD 147 (710)
Q Consensus 79 ~~~~~Rl~~Lr~~m~~~~~~----lDa~iI~~~D~-----h~se~~~~~~~~~~ylTGFtGs~g~~vvt--~~~a~L~tD 147 (710)
..+.+|+++|++.|++ .+ .|++||++... .-.+|.-..+.|.+|||||....+++|+. .++++||++
T Consensus 22 ~e~~~Rr~~l~~~~~~--~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi~~~~~~~~L~~~ 99 (494)
T 2iw2_A 22 ALFALNRQRLCERLRK--NPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVP 99 (494)
T ss_dssp HHHHHHHHHHHHHHHH--CTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEEETTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHh--hhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCCeEEEEEccCCeEEEEEC
Confidence 4467899999999997 64 46999977544 23456555678899999999888887774 378999998
Q ss_pred cccH
Q 005183 148 GRYF 151 (710)
Q Consensus 148 ~RY~ 151 (710)
.+..
T Consensus 100 ~~~~ 103 (494)
T 2iw2_A 100 RLPA 103 (494)
T ss_dssp CCCG
T ss_pred CCCH
Confidence 6643
No 64
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=92.52 E-value=0.39 Score=50.82 Aligned_cols=97 Identities=16% Similarity=0.079 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc----CccccccccCCcccc-CCCcccccCCCCc
Q 005183 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMT 604 (710)
Q Consensus 530 ~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~----h~~GHGIG~~l~vhE-~P~~i~~~~~~~~ 604 (710)
+.+|++-..+.+++..+++.++| |++-.||+..+.+.+.+.|.... .+....++ ...++ .|..+ .++.
T Consensus 70 ~~mR~A~~i~~~a~~~~~~~ikp-G~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~--~g~n~~~~H~~----~~~~ 142 (337)
T 4fuk_A 70 QRIKTVCQLSREVLDIATAAAKP-GITTDELDRIVHEATVERNMYPSPLNYYGFPKSVC--TSVNEVICHGI----PDSR 142 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEECCC----CCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceee--ccccccccCCC----CCCc
Confidence 35677888888999999999999 99999999999999999886211 11111111 11111 11111 1678
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|++|.++.+..|.+..|.. .-+..|+.|
T Consensus 143 ~l~~GD~v~iD~g~~~~GY~-sD~tRT~~v 171 (337)
T 4fuk_A 143 ELEEGDILNIDVSSYLNGFH-GDLNETVFI 171 (337)
T ss_dssp BCCTTCEEEEEEEEEETTEE-EEEEEEEES
T ss_pred cccCCCEEEEecceeECCEE-EeeeeeEEe
Confidence 89999999999998877643 334455554
No 65
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=91.30 E-value=0.98 Score=45.74 Aligned_cols=95 Identities=13% Similarity=-0.040 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc----CccccccccCCcccc-CCCcccccCCCCccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTPL 606 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~----h~~GHGIG~~l~vhE-~P~~i~~~~~~~~~L 606 (710)
+|++-..+.+++.++++.++| |++-.||++.++..+.+.|.... .+....+. ...+. .|. .. .++.+|
T Consensus 13 mr~A~~i~~~a~~~~~~~ikp-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~H---~~-~~~~~l 85 (264)
T 3tb5_A 13 MDESGELLADVHRHLRTFIKP-GITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATC--CSINDEICH---GF-PRKKVL 85 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEE--EEETTEEEC---CC-CCSCBC
T ss_pred HHHHHHHHHHHHHHHHHhCcC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCcceE--ECCcccccC---CC-CCCccc
Confidence 466667778899999999999 99999999999999999886210 11111111 11111 111 11 156789
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
++|.++.+..|....| |-.-+..|+.|
T Consensus 86 ~~Gdlv~iD~g~~~~G-Y~sD~tRT~~v 112 (264)
T 3tb5_A 86 KDGDLIKVDMCVDLKG-AISDSCWSYVV 112 (264)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCCCEEEEeccceecc-eeeeccccccc
Confidence 9999999999987665 44556666666
No 66
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=90.60 E-value=0.8 Score=47.41 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCcccccCCCCcccc
Q 005183 530 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 607 (710)
Q Consensus 530 ~e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L~ 607 (710)
+.+|++-..+.+++..+.+.++| |++-.||++.+.+.+.+.|.. |+..+ +++.. .+|-.|. +.++.+|+
T Consensus 4 ~~mr~A~~i~~~~l~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~fp~~v--s~n~~-~~H~~p~-----~~~~~~L~ 74 (295)
T 1xgs_A 4 EKLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNL--SINEI-AAHYTPY-----KGDTTVLK 74 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEE--EETTE-EECCCCC-----TTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHcCCCCCCCcEE--eeCCc-cccccCC-----CCCCcccc
Confidence 35688888899999999999999 999999999999999998874 33211 22211 1232231 11467899
Q ss_pred CCCEEEECceeeecCcceEEEEEeEEE
Q 005183 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|.++.+.-|....|. -.-+..|+.|
T Consensus 75 ~GDiv~iD~G~~~~GY-~sD~tRT~~v 100 (295)
T 1xgs_A 75 EGDYLKIDVGVHIDGF-IADTAVTVRV 100 (295)
T ss_dssp TTCEEEEEEEEEETTE-EEEEEEEEET
T ss_pred CCCEEEEEEeEEECCE-EEEEEEEEEe
Confidence 9999999999877653 3445566665
No 67
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=90.14 E-value=1.4 Score=46.29 Aligned_cols=95 Identities=14% Similarity=0.012 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCC--c--CccccccccCCccccC-CCcccccCCCCccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY--R--HGTGHGVGAALNVHEG-PQSISFRYGNMTPL 606 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~--~--h~~GHGIG~~l~vhE~-P~~i~~~~~~~~~L 606 (710)
+|++...+.+++.++++.++| |++-.||++.+.+.+.+.|... . ++..-.++ ..+++. |. +.+ ++.+|
T Consensus 84 mR~A~~ia~~al~~~~~~i~p-Gvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~--sg~n~~~~H---~~p-~~~~L 156 (329)
T 2b3h_A 84 MRLVCRLAREVLDVAAGMIKP-GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCC--TSVNEVICH---GIP-DRRPL 156 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCC-CSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCeEE--ecCCCCcCC---CCC-CCcCC
Confidence 355566667888888999999 9999999999999999988621 0 01111111 111110 11 112 46789
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
++|.++.+.-|.+..| |-.-+..|+.|
T Consensus 157 ~~GDiv~iD~G~~~~G-Y~sD~tRT~~v 183 (329)
T 2b3h_A 157 QEGDIVNVDITLYRNG-YHGDLNETFFV 183 (329)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCCEEEEEeeEEECC-EEEeeEEEEEe
Confidence 9999999999987754 44556666666
No 68
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=89.31 E-value=1.9 Score=46.12 Aligned_cols=96 Identities=11% Similarity=-0.016 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc--Ccccc--ccccCCccccC-CCcccccCCCCccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR--HGTGH--GVGAALNVHEG-PQSISFRYGNMTPL 606 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~--h~~GH--GIG~~l~vhE~-P~~i~~~~~~~~~L 606 (710)
+|++...+.+++.++++.++| |++-.||++.+.+.+.+.|.... ...+. .|+ ...++. |. ..+ ++.+|
T Consensus 112 mR~A~~ia~~al~~~~~~ikp-GvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~--sg~N~~i~H---~~p-~~r~L 184 (368)
T 3s6b_A 112 IREACILGRKTLDYAHTLVSP-GVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCC--TSVNEIVCH---GIP-DYRPL 184 (368)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTEEEC---CCC-CSCBC
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCCeEE--EcCcccccc---CCC-CCccc
Confidence 355666677888888999999 99999999999999999886310 01111 122 112211 11 112 46789
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
++|.++.+.-|.+..| |-.-+..|++|.
T Consensus 185 ~~GDiV~iD~G~~~~G-Y~sDitRT~~vG 212 (368)
T 3s6b_A 185 KSGDIINIDISVFYKG-VHSDLNETYFVG 212 (368)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred cCCCEEEEEEeEEECc-EEEEEEEEEEEC
Confidence 9999999999987764 445567777774
No 69
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=88.21 E-value=2.8 Score=41.84 Aligned_cols=92 Identities=16% Similarity=0.040 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--------CcCccccccccCCccccCCCcccccCCCC
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--------YRHGTGHGVGAALNVHEGPQSISFRYGNM 603 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--------~~h~~GHGIG~~l~vhE~P~~i~~~~~~~ 603 (710)
+|++-..+.+++..+.+.++| |++-.||.+.+...+.+.|.. |...+.=|... ...|-. + ++
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~-~~~H~~-------p-~~ 81 (252)
T 1qxy_A 12 LKEIGYICAKVRNTMQAATKP-GITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNE-EVAHGI-------P-SK 81 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETT-EEECCC-------C-CS
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCc-cccCCC-------C-CC
Confidence 455666677888888999999 999999999999999988863 11111111110 011211 2 46
Q ss_pred ccccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
.+|++|.++.+.-|....| |-.-+..|+.|
T Consensus 82 ~~l~~gd~v~iD~g~~~~g-y~sD~tRT~~v 111 (252)
T 1qxy_A 82 RVIREGDLVNIDVSALKNG-YYADTGISFVV 111 (252)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCcCCCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 7899999999999986654 45556777777
No 70
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=88.13 E-value=1.9 Score=45.85 Aligned_cols=95 Identities=14% Similarity=0.087 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCCc-Ccccc--ccccCCc---cccCCCcccccCCC-C
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR-HGTGH--GVGAALN---VHEGPQSISFRYGN-M 603 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~~-h~~GH--GIG~~l~---vhE~P~~i~~~~~~-~ 603 (710)
.+|++-+++.+++..+.+.++| |++-.||.+.+.+.+.+.|-.-. .+.|+ ++| .+ .|-.|. .++ +
T Consensus 49 ~mR~A~~I~~~a~~~~~~~ikp-G~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~s--~N~~~~H~~P~-----~~d~~ 120 (360)
T 2nw5_A 49 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--MNSCAAHYTVN-----PGEQD 120 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--ETTEEECCCCC-----TTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHhcCCCccCccccCceee--ccccccCCCCC-----cccCC
Confidence 3456666677888889999999 99999999999999988764211 01111 122 11 122221 112 6
Q ss_pred ccccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 604 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 604 ~~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
.+|++|.++.+.-|....| |-.=+..|+.|
T Consensus 121 ~~L~~GDlV~ID~G~~~~G-Y~sD~tRT~~v 150 (360)
T 2nw5_A 121 IVLKEDDVLKIDFGTHSDG-RIMDSAFTVAF 150 (360)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCcCCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 7899999999999987765 34445666665
No 71
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=87.56 E-value=3.1 Score=42.66 Aligned_cols=96 Identities=15% Similarity=-0.011 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCC--cCcccc--ccccCCccccCCCcccccCCCCcccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY--RHGTGH--GVGAALNVHEGPQSISFRYGNMTPLV 607 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~--~h~~GH--GIG~~l~vhE~P~~i~~~~~~~~~L~ 607 (710)
++++...+.+++.++++.++| |++-.||.+.+...+.+.|... ....|+ .++ ...+.. ...+.+ ++.+|+
T Consensus 50 ~r~A~~i~~~a~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~--~~H~~p-~~~~l~ 123 (285)
T 3pka_A 50 MRVAGRIAAGALAEAGKAVAP-GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCC--TSLNEV--ICHGIP-DSTVIT 123 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTE--EECCCC-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCceE--ecccce--eecCCC-CCcccC
Confidence 355566667788888899999 9999999999999999988631 111111 121 111111 011112 467899
Q ss_pred CCCEEEECceeeecCcceEEEEEeEEE
Q 005183 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|.++.+.-|....| |-.-+..|+.|
T Consensus 124 ~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 149 (285)
T 3pka_A 124 DGDIVNIDVTAYIGG-VHGDTNATFPA 149 (285)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 999999998876554 44456666666
No 72
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=87.55 E-value=0.81 Score=49.57 Aligned_cols=99 Identities=14% Similarity=0.001 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC-Cc------CccccccccCCcccc-CCCcccccCC-C
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR------HGTGHGVGAALNVHE-GPQSISFRYG-N 602 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~-~~------h~~GHGIG~~l~vhE-~P~~i~~~~~-~ 602 (710)
+|++-.++.+++..+.+.++| |++-.||+..+.+.+.+.|.. |. .+.++.+. ..+.+ -+..+ +.++ +
T Consensus 28 mR~A~~i~~~~l~~~~~~ikp-Gvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~--vS~N~~v~H~~-P~~~d~ 103 (401)
T 2q8k_A 28 YKMGGDIANRVLRSLVEASSS-GVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS--ISVNNCVCHFS-PLKSDQ 103 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE--EEETTEEECCC-CCTTSC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE--EeCCcccccCC-CCCCCC
Confidence 455666677888888999999 999999999999999887641 21 12223332 22222 11111 0012 2
Q ss_pred CccccCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 603 MTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 603 ~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
+.+|++|.++.+.-|....| |-.=+..|++|.
T Consensus 104 ~~~L~~GDiV~ID~G~~~~G-Y~sD~tRT~~vG 135 (401)
T 2q8k_A 104 DYILKEGDLVKIDLGVHVDG-FIANVAHTFVVD 135 (401)
T ss_dssp CCBCCTTCEEEEEEEEEETT-EEEEEEEEEETT
T ss_pred CcccCCCCEEEEEEEEEECC-EEEEEEEEEEEC
Confidence 47899999999999987765 444567777775
No 73
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=86.75 E-value=3.8 Score=41.29 Aligned_cols=96 Identities=13% Similarity=0.034 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCCC--cCcccc--ccccCCccccCCCcccccCCCCcccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY--RHGTGH--GVGAALNVHEGPQSISFRYGNMTPLV 607 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~~--~h~~GH--GIG~~l~vhE~P~~i~~~~~~~~~L~ 607 (710)
+|++...+.+++.++++.++| |++-.||.+.+.+.+.+.|... ....|+ .+. ...+. ....+.+ ++.+|+
T Consensus 17 ~r~A~~i~~~~~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~--~~~H~~p-~~~~l~ 90 (262)
T 3mx6_A 17 MRAAGKLAAETLDFITDHVKP-NVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSIC--TSINH--VVCHGIP-NDKPLK 90 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETT--EEECCCC-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--ecccc--cccCCCC-CCcccC
Confidence 456666777888888899999 9999999999999999988621 000111 111 11111 0011112 457899
Q ss_pred CCCEEEECceeeecCcceEEEEEeEEE
Q 005183 608 EGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 608 ~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|.++.+.-|....| |-.-+..|+.|
T Consensus 91 ~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 116 (262)
T 3mx6_A 91 NGDIVNIDVTVILDG-WYGDTSRMYYV 116 (262)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 999999999886554 44556666666
No 74
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=85.85 E-value=3.7 Score=41.33 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHH-HHHcCCCCc----CccccccccCCccccCCCcccccCCCCccc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLDYR----HGTGHGVGAALNVHEGPQSISFRYGNMTPL 606 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~-l~~~G~~~~----h~~GHGIG~~l~vhE~P~~i~~~~~~~~~L 606 (710)
+|++-..+.+++..+.+.++| |++-.+|.+.+... +.+.|.... .+....+. ...+.. ...+.|.+..+|
T Consensus 13 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~--~g~n~~--~~H~~p~~~~~l 87 (263)
T 2gg2_A 13 MRVAGRLAAEVLEMIEPYVKP-GVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVC--ISINEV--VCHGIPDDAKLL 87 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGCST-TCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSE--EEETTE--EECCCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHhCCccccccccCCCcceE--eccccc--ccCCCCCCCcCc
Confidence 455566667778888899999 99999999999999 888876311 01111111 111110 001112123789
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 88 ~~gd~v~iD~G~~~~g-y~sD~tRT~~v 114 (263)
T 2gg2_A 88 KDGDIVNIDVTVIKDG-FHGDTSKMFIV 114 (263)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 9999999999986654 45556777776
No 75
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=85.59 E-value=5.5 Score=40.71 Aligned_cols=97 Identities=18% Similarity=0.073 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcCcccc--ccccCCcccc-CCCcccccCCCCcc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGH--GVGAALNVHE-GPQSISFRYGNMTP 605 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h~~GH--GIG~~l~vhE-~P~~i~~~~~~~~~ 605 (710)
..+++...+.+++..+++.++| |++-.||.+.+...+.+.|.. +....++ .|+ ...+. .|. +.+..+.+
T Consensus 42 ~~r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p~~~~~ 115 (286)
T 3tav_A 42 AMAAAGSIVGAALVAVRDAAKA-GVSTLELDQVAESVIREAGAVPSFLGYHGFPASIC--SSVNDQVVH---GIPSATAV 115 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTBCSC---CCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCCceE--EecCccccC---CCCCCCcc
Confidence 3456666677888888999999 999999999999999998863 2110111 111 11111 121 12222678
Q ss_pred ccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 606 LVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 606 L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
|++|.++.+.-|....| |-.-+..|+.|
T Consensus 116 l~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 143 (286)
T 3tav_A 116 LADGDLVSIDCGAILDG-WHGDSAWTFAV 143 (286)
T ss_dssp CCTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred cCCCCEEEEEEEEEECC-EEEeeEEEEEC
Confidence 99999999998876554 44556666666
No 76
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=84.70 E-value=4.1 Score=41.06 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC--CcC--ccccccccCCccccCCCcccccCCCCcc-c
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRH--GTGHGVGAALNVHEGPQSISFRYGNMTP-L 606 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~--~~h--~~GHGIG~~l~vhE~P~~i~~~~~~~~~-L 606 (710)
+|++-..+.+++..+.+.++| |++-.||.+.++..+.+.|.. +.. +....|. ...++.- ..+.| ++.+ |
T Consensus 25 ~r~A~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~--~g~n~~~--~H~~p-~~~~~l 98 (262)
T 1o0x_A 25 MKKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC--VSVNEEV--VHGLP-LKEKVF 98 (262)
T ss_dssp HHHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEE--EEETTBC--SCCCC-CTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCcceE--ecccccc--cCCCC-CCCccc
Confidence 355555666777788888999 999999999999999998863 211 1111122 1112110 11122 4566 9
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 99 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 125 (262)
T 1o0x_A 99 KEGDIVSVDVGAVYQG-LYGDAAVTYIV 125 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEC
Confidence 9999999999886654 45556677766
No 77
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=83.44 E-value=2.4 Score=47.83 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHcc---------CCCCCChHHHHHHHHHHHHHcCC------CCcCccccccccCCcccc----
Q 005183 531 REKECFTRVLQGHIALDQAI---------FPQSTPGFVLDAFARSSLWKIGL------DYRHGTGHGVGAALNVHE---- 591 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i---------~P~G~~~~~v~~~ar~~l~~~G~------~~~h~~GHGIG~~l~vhE---- 591 (710)
..|.+-+++.++...++..+ +| |++..||.....+.+.+.+- ....|.+|..+ +.+.+
T Consensus 48 KYr~AgeIa~~vLk~v~~li~~G~~~~~~kp-ga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~--ISvN~~vaH 124 (614)
T 4b6a_t 48 KYRTAGQIAQTALKYVTSLINDSYHSKTTQR-QLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTT--IDIDQISGG 124 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHHHTTC-CCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEE--EEETTEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCC-CCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCce--ecHHHcccC
Confidence 44555556666666666554 56 78888888877777765321 23446667666 55433
Q ss_pred -CCCcccc---------------cCCCCccccCCCEEEECceeeecCcceEEEEEeEEEeec
Q 005183 592 -GPQSISF---------------RYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 637 (710)
Q Consensus 592 -~P~~i~~---------------~~~~~~~L~~GMV~siEPgiy~~g~~GiriEd~v~Vte~ 637 (710)
.|. .+- ....+.+|++|.|+-|.-|..++| |.+-...||+|.+.
T Consensus 125 ysP~-~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDG-yiadvA~Tvvvg~~ 184 (614)
T 4b6a_t 125 WCPE-IDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDG-YTSEVSHTMVIYPV 184 (614)
T ss_dssp CCCC-TTS------------------CCCBCCTTCEEEEEEEEEETT-EEEEEEEEEECCCC
T ss_pred CCCC-CcchhhcccccccccccccccccccccCCCEEEEEeeEEECC-eEEEEEEEEEECCc
Confidence 332 110 001356899999999999999987 57788999999765
No 78
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=81.50 E-value=2.2 Score=47.05 Aligned_cols=94 Identities=15% Similarity=0.033 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCChHHHHHH----HHHHHHHcCCCCcCccccccccCCcccc-CCCcccccCC--CCc
Q 005183 532 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAF----ARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYG--NMT 604 (710)
Q Consensus 532 ~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~----ar~~l~~~G~~~~h~~GHGIG~~l~vhE-~P~~i~~~~~--~~~ 604 (710)
+|++-.++.+++..+...++| |++-.||... +++.+.+.|... +.|+... +.+.+ -+. +.|. ++.
T Consensus 169 mR~A~~Ia~~al~~~~~~ikp-GvTe~ELa~~le~~~~~~i~~~Ga~~--g~~FP~i--vSvN~~v~H---g~P~~~d~r 240 (478)
T 1b6a_A 169 FREAAEAHRQVRKYVMSWIKP-GMTMIEICEKLEDCSRKLIKENGLNA--GLAFPTG--CSLNNCAAH---YTPNAGDTT 240 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TSBHHHHHHHHHHHHHHHHTCBTTTE--EEEEEEE--EEETTEEEC---CCCCTTCCC
T ss_pred HHHHHHHHHHHHHHHhhhcCC-CCcHHHHHHHHHHHHHHHHHhcCCcc--cCCCCeE--EECCCcccc---CCCCcccCc
Confidence 345555666778888899999 9999999544 444444456520 1111111 11111 111 1121 347
Q ss_pred cccCCCEEEECceeeecCcceEEEEEeEEE
Q 005183 605 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 634 (710)
Q Consensus 605 ~L~~GMV~siEPgiy~~g~~GiriEd~v~V 634 (710)
+|++|.++.|.-|....|. -.-+..|+.|
T Consensus 241 ~Lk~GDiV~ID~G~~~dGY-~sD~tRT~~V 269 (478)
T 1b6a_A 241 VLQYDDICKIDFGTHISGR-IIDCAFTVTF 269 (478)
T ss_dssp BCCTTCCEEEEEEEEETTE-EEEEEEEECS
T ss_pred cccCCCeEEEEEEEEECCE-EEEEEEEEEe
Confidence 8999999999999877653 2333444443
No 79
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=47.10 E-value=68 Score=34.89 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCCC---CcCccccccccCCcccc-CCCcccccCCCCccc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHE-GPQSISFRYGNMTPL 606 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~~---~~h~~GHGIG~~l~vhE-~P~~i~~~~~~~~~L 606 (710)
.+|++-..+.+++.++++.++| |++-.+|.......+ +.|.. |..-++- | .+. -|. +.+++...+
T Consensus 167 ~mr~A~~ia~~a~~~~~~~i~p-G~tE~el~~~~~~~~-~~g~~~~~f~~IVas--G----~naa~~H---~~~~~~~~l 235 (451)
T 3rva_A 167 CMREANKLAVAGHKAAEQAFRE-GKSEFDINLAYAAAS-RQGDNDVPYTSIVAL--N----EHASILH---YMQCDTVAP 235 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH-TCCTTTSSSCCEEEE--G----GGGGCTT---CCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHH-HcCCCcCCcCcEEEE--C----CcccccC---CCCCCCccc
Confidence 3466667777888899999999 999999987654433 23321 2211111 1 111 121 122233457
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
++|.++.+.-|....| |-.-+..|+.|.
T Consensus 236 ~~GdlVliD~G~~~~G-Y~sDiTRT~~vG 263 (451)
T 3rva_A 236 KESRSFLIDAGANYHG-YAADITRTYAQE 263 (451)
T ss_dssp SSCCEEEEEEEEEETT-EEEEEEEEEECT
T ss_pred CCCCEEEEEeeEEECC-EEEEeEEEEEeC
Confidence 9999999998876554 455567777764
No 80
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=33.90 E-value=79 Score=35.07 Aligned_cols=93 Identities=12% Similarity=0.029 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHcCC---CCcCccccccccCCcccc-CCCcccccCCCCccc
Q 005183 531 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL---DYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPL 606 (710)
Q Consensus 531 e~~~~y~~vl~a~~~~~~~i~P~G~~~~~v~~~ar~~l~~~G~---~~~h~~GHGIG~~l~vhE-~P~~i~~~~~~~~~L 606 (710)
.++++-..+.+++.++++.++| |++-.+|.......+ +.|. .|..-++-| .+. -|. +.+++...+
T Consensus 167 ~mR~A~~ia~~a~~~~~~~ikp-G~tE~el~~~~~~~~-~~g~~~~sf~~IVasG------~naa~~H---~~p~~~~~l 235 (517)
T 3l24_A 167 CMREANKIAVQGHKAARDAFFQ-GKSEFEIQQAYLLAT-QHSENDNPYGNIVALN------ENCAILH---YTHFDRVAP 235 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH-TCCGGGSSSCCEEEEG------GGGGCTT---CCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHH-HcCCCcCCcCCEEEEc------ccccccc---CCCCCCccc
Confidence 3466667777888899999999 999999987544332 2222 121111111 111 121 122233457
Q ss_pred cCCCEEEECceeeecCcceEEEEEeEEEe
Q 005183 607 VEGMIVSNEPGYYEDHAFGIRIENLLYVK 635 (710)
Q Consensus 607 ~~GMV~siEPgiy~~g~~GiriEd~v~Vt 635 (710)
++|.++.+.-|....| |..=+..|+.|.
T Consensus 236 ~~GDlVliD~G~~~~G-Y~sDiTRT~~vG 263 (517)
T 3l24_A 236 ATHRSFLIDAGANFNG-YAADITRTYDFT 263 (517)
T ss_dssp SSCCEEEEEEEEEETT-EEEEEEEEEESS
T ss_pred cCCCEEEEeecEEECC-EEEEeEEEEEcC
Confidence 9999999999876554 455566777663
No 81
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DN binding, phosphoprotein, transcription regul; NMR {Helicobacter pylori}
Probab=24.95 E-value=47 Score=28.67 Aligned_cols=57 Identities=16% Similarity=0.097 Sum_probs=39.4
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCC
Q 005183 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (710)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~gl 268 (710)
+|-.+++-|.-.+...| +.+.- +.|++.+|+. .+. .+...+..-+.+||+.|.+.+.
T Consensus 42 Lt~~E~~LL~~L~~~~g-~vvsr--e~L~~~vW~~-~~~------------~~~~tl~~~I~rLRkkL~~~~~ 98 (115)
T 2k4j_A 42 LTRAEYEILSLLISKKG-YVFSR--ESIAIESESI-NPE------------SSNKSIDVIIGRLRSKIEKNPK 98 (115)
T ss_dssp SCHHHHHHHHHHHHHCC-CEECH--HHHHHHTCCS-SCT------------TCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCHHHHHHHHHHHHcCC-cEEcH--HHHHHHHcCC-CCC------------CchhHHHHHHHHHHHHhhcCCC
Confidence 67777877766665544 55664 8899999962 221 1345677889999999987553
No 82
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=24.36 E-value=46 Score=28.79 Aligned_cols=57 Identities=14% Similarity=0.132 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCC
Q 005183 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (710)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~gl 268 (710)
+|-.+++-|.-.+...| +.+.- +.|++.+|+.+.+ .+...+..-+.+||+.|.+.+.
T Consensus 37 Lt~~E~~lL~~L~~~~g-~vvsr--~~L~~~vW~~~~~-------------~~~~~l~~~I~rLRkkL~~~~~ 93 (120)
T 2z9m_A 37 LTHREFELFHYLSKHMG-QVMTR--EHLLQTVWGYDYF-------------GDVRTVDVTIRRLREKIEDDPS 93 (120)
T ss_dssp CCHHHHHHHHHHHTTTT-CCEEH--HHHHHHHHCTTCC-------------SCTHHHHHHHHHHHHHHCSSTT
T ss_pred CCHHHHHHHHHHHHCCC-ceEcH--HHHHHHHhCCCCC-------------CCcchHHHHHHHHHHHhhcCCC
Confidence 67788887766665544 56664 8899999962211 1235677789999999976543
No 83
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A 3t72_A
Probab=24.11 E-value=68 Score=26.90 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=40.6
Q ss_pred CCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCC
Q 005183 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (710)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~gl 268 (710)
.+|-.+++-|.-.+...| +.+.- +.+++.+|+. .+. .+...+..-+.+||+.|.+.+.
T Consensus 31 ~Lt~~E~~lL~~L~~~~g-~vvsr--~~L~~~vW~~-~~~------------~~~~~l~~~I~rLRkkL~~~~~ 88 (106)
T 1gxq_A 31 EMGPTEFKLLHFFMTHPE-RVYSR--EQLLNHVWGT-NVY------------VEDRTVDVHIRRLRKALEPGGH 88 (106)
T ss_dssp CCCHHHHHHHHHHHHSCS-SEECH--HHHHHHHTCS-SSC------------CCTHHHHHHHHHHHHHHGGGTG
T ss_pred EcCHHHHHHHHHHHHCCC-eeEcH--HHHHHHHcCC-CCC------------CCcccHHHHHHHHHHHhcccCC
Confidence 367888887776665544 55664 8899999962 211 2356777889999999987543
No 84
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=23.30 E-value=44 Score=28.30 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=39.2
Q ss_pred CCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCC
Q 005183 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 268 (710)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~gl 268 (710)
.+|-.+++-|.-.+...| +.+.- +.+++.+|+. .+.. +...+..-+.+||+.|.+.+.
T Consensus 31 ~Lt~~E~~lL~~L~~~~g-~~vsr--~~L~~~vW~~-~~~~------------~~~~l~~~I~rLRkkL~~~~~ 88 (110)
T 1opc_A 31 PLTSGEFAVLKALVSHPR-EPLSR--DKLMNLARGR-EYSA------------MERSIDVQISRLRRMVEEDPA 88 (110)
T ss_dssp CCCHHHHHHHHHHHHSTT-CCEEH--HHHHHHHCCS-SSCT------------TSSCHHHHHHHHHHHHCSCTT
T ss_pred EcCHHHHHHHHHHHHcCC-ceEcH--HHHHHHHcCC-CCCC------------CcchHHHHHHHHHHHhhcCCC
Confidence 367788887766665443 56664 8899999963 2211 234567789999999976543
No 85
>3q9v_A DNA-binding response regulator; response regulator protein, DNA binding protein; 1.60A {Deinococcus radiodurans}
Probab=23.13 E-value=64 Score=28.65 Aligned_cols=59 Identities=19% Similarity=0.210 Sum_probs=40.0
Q ss_pred CCcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcCCC
Q 005183 195 LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGSS 269 (710)
Q Consensus 195 ~~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glD 269 (710)
.+|-.+++-|.-.+...| +.+.- +.+++.+|+. .+.. +...+..-+.+||+.|.+.+.+
T Consensus 60 ~Lt~~E~~LL~~L~~~~g-~vvsr--e~L~~~vW~~-~~~~------------~~~~l~~~I~rLRkkL~~~~~~ 118 (133)
T 3q9v_A 60 RLSPKEFDILALLIRQPG-RVYSR--QEIGQEIWQG-RLPE------------GSNVVDVHMANLRAKLRDLDGY 118 (133)
T ss_dssp CCCHHHHHHHHHHTTSTT-CEEEH--HHHHHHHHTT-CCCT------------TCCHHHHHHHHHHHHHHHTTCT
T ss_pred EcCHHHHHHHHHHHHCCC-ceEcH--HHHHHHHcCC-CCCC------------cHHHHHHHHHHHHHHHhccCCC
Confidence 367788887766554443 56675 8899999963 2211 2245677899999999986654
No 86
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=22.44 E-value=62 Score=26.90 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=37.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEccCcchHHHhhccCCCCCCCCccccccccccchhHHHHHHHHHHHHHHcC
Q 005183 196 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAG 267 (710)
Q Consensus 196 ~s~~~~~~L~~~l~~~~~~l~~~~~~~lvd~iw~~~rp~~p~~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~g 267 (710)
+|-.+++-|.-.+...| +.+.- +.+++.+|+.+ +. .+...+..-+.+||+.|++.+
T Consensus 29 Lt~~e~~lL~~L~~~~g-~~vsr--~~L~~~vw~~~-~~------------~~~~~l~~~I~rLRkkL~~~~ 84 (102)
T 3zq7_A 29 LTPIEFRLLAVLLNNAG-KVLTQ--RQLLNQVWGPN-AV------------EHSHYLRIYMGHLRQKLEQDP 84 (102)
T ss_dssp CCHHHHHHHHHHHHTTT-CEEEH--HHHHHHHTSSS-CS------------TTHHHHHHHHHHHHHHHCSST
T ss_pred cCHHHHHHHHHHHHCCC-eeECH--HHHHHHhcCCC-CC------------CccchHHHHHHHHHHHhhcCC
Confidence 67778886666555443 56664 88999999622 11 122457778999999998654
No 87
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=21.11 E-value=62 Score=31.99 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=33.7
Q ss_pred CCCccccCCCEEEECceeee----cCc-ceEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 005183 601 GNMTPLVEGMIVSNEPGYYE----DHA-FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 658 (710)
Q Consensus 601 ~~~~~L~~GMV~siEPgiy~----~g~-~GiriEd~v~Vte~~~~~~~~~~~~lg~E~LT~~P 658 (710)
+...+|.||.-+|+.||+|- .+. +.+=+.+.=-+.+|++.|. |+ +++..+|
T Consensus 171 G~~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt~NDD~~DN~-----F~--~pigRfp 226 (246)
T 3kmh_A 171 GSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNH-----FL--QPLDRYN 226 (246)
T ss_dssp TCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEECCCTTTSEE-----ES--SCC----
T ss_pred CCEEEECCCCeEecCCCCEEEEEecCCCccEEEEEcccCcCCCCCcc-----cc--CCcCCCC
Confidence 46678999999999999985 222 2388888777777766554 44 4466665
No 88
>1ynf_A Succinylarginine dihydrolase; 1.90A {Escherichia coli} SCOP: d.126.1.7 PDB: 1ynh_A* 1yni_A*
Probab=20.07 E-value=1.4e+02 Score=31.74 Aligned_cols=144 Identities=17% Similarity=0.244 Sum_probs=90.4
Q ss_pred CccccccccccchhHHHHHHHHHHHHHHcCCCEEEEccc-----ch-hhhhcCCCCCCCCCCceeEEEEEEe-CCceEEE
Q 005183 238 KPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISML-----DE-IAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLF 310 (710)
Q Consensus 238 ~~i~~~~~~~ag~~~~~Kl~~lr~~L~e~glDallis~~-----dn-IaYLtg~rg~di~~~Pv~~a~liV~-~~~~~Lf 310 (710)
+-+|.|...|. +-..-++.||+.|.. +-.+-|... |- -.||+|- =||-. +++-.|+
T Consensus 269 ~vLf~He~AF~--d~~~~l~~lr~~~~~--~~~ieVp~~~vsl~DAV~SYLFNS-------------QLlt~pdg~M~Lv 331 (458)
T 1ynf_A 269 QVLFCHQQAFA--RQSQLLANLRARVNG--FMAIEVPATQVSVSDTVSTYLFNS-------------QLLSRDDGSMMLV 331 (458)
T ss_dssp TEEEEETTSBT--THHHHHHHHHHHSTT--CEEEEECTTTSCHHHHHHHTTTSS-------------EEEECTTSCEEEE
T ss_pred ceeeeHHhhhc--CHHHHHHHHHHhcCC--CEEEEeccccCcHHHHHHHhhhcc-------------eeeecCCCcEEEE
Confidence 56778888884 445677888888764 544555432 12 3488872 34444 4456777
Q ss_pred EeCCCCCHHHHhhhhcCCeEEeecccHHHHHHHHHhcCCEE----EEeCCCCcHHHHHHHHHHHHHHhhhcccccccccc
Q 005183 311 VDDSKVTPDVMDHLKNAGVELRPYNSILSEIKSLAAQGAQL----WLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKM 386 (710)
Q Consensus 311 vd~~k~~~~~~~~l~~~~V~i~~y~~i~~~l~~l~~~~~~i----~ld~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 386 (710)
++. |.++. ..+..+|..+...+.-| .+| +.+++++
T Consensus 332 ~P~-----Ecr~n-----------~~V~~yl~~lv~~~~PI~~v~~~D-------lrqSM~N------------------ 370 (458)
T 1ynf_A 332 LPQ-----ECREH-----------AGVWGYLNELLAADNPISELKVFD-------LRESMAN------------------ 370 (458)
T ss_dssp EEH-----HHHSC-----------HHHHHHHHHHHHSSSSEEEEEEEC-------CHHHHHT------------------
T ss_pred cch-----HHhcC-----------HHHHHHHHHHHhCCCCcceEEEec-------hhhhhhc------------------
Confidence 762 33322 13445555555432222 233 2233322
Q ss_pred ccCCCCCCCCCcccccCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 005183 387 HTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVA 455 (710)
Q Consensus 387 ~~~~~~~~~~~~~vd~~~~i~~lRavKs~~EIe~mR~A~~~~~~al~~~~~~l~~~i~~~~g~tE~ela 455 (710)
. ..+.+.++|.+-|++|++.+-....+++.-+.++-.|+++.- +.-++..|++
T Consensus 371 --------G------GGPACLRLRVvl~~~El~Avnp~~lm~~~l~~~L~~wV~~hY--Rd~L~~~DLa 423 (458)
T 1ynf_A 371 --------G------GGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYY--RDRLTAADLA 423 (458)
T ss_dssp --------T------CCTTTTEEEEEECHHHHHHSCGGGBCSHHHHHHHHHHHHHHC--CSCBCGGGGG
T ss_pred --------C------CCcchheeeeeCCHHHHHhcCCceecCHHHHHHHHHHHHHhc--cccCChhhcc
Confidence 1 145578899999999999999998899888888889998877 5667777765
Done!