BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005186
(710 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585368|ref|XP_002533380.1| conserved hypothetical protein [Ricinus communis]
gi|223526773|gb|EEF28998.1| conserved hypothetical protein [Ricinus communis]
Length = 1112
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/722 (53%), Positives = 492/722 (68%), Gaps = 27/722 (3%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
MESF+PFGGFF TPSE L Q +SRC C+EKCEQE++A SKGG AS+ADQ QS
Sbjct: 406 MESFIPFGGFFSTPSELNGSLSSSYQCISRCHLCNEKCEQEVLAVSKGGCVASVADQYQS 465
Query: 61 VLPSWLQMAEPDSNKALDLKTKEDGLALRSKIT---KKWDDICQSLHRTQ---SLQVGSQ 114
LPSWLQMAE +NK LD+KT++DG L +K+ KKWD IC LH T+ S + S
Sbjct: 466 NLPSWLQMAELGTNKGLDVKTRDDGDVLSAKVAGLQKKWDSICWRLHLTRPQGSNTLPSG 525
Query: 115 FPTVVGFQFLQDKKENA-NNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTV 173
FPTVVGFQ ++DKK++A S ++TNA ++G +NV PID + +S + P
Sbjct: 526 FPTVVGFQLVEDKKDDAEKGSSNNTNAPLDGNRCMNV----PIDLQKISRRQLGVPLSAA 581
Query: 174 SGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLL 233
S A +S+ + S D +S G RSPC SNSS+ DG+R SPT TSVTTDLGL +
Sbjct: 582 SVANTESV-KQWERPSKEEDHESDGLRSPCSYSNSSIADGNRASPTSATSVTTDLGLRIS 640
Query: 234 GIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLAQSSSSSCPDLNCQF 290
I TS + K+P +K E S++LSG S +NGSIS+ LA SSS S D+ QF
Sbjct: 641 PIS---TSYDTKKPENKHYVELSRDLSGSFSPNNDVINGSISDHLAHSSSFSSLDIGRQF 697
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCG 350
D +++K L RALTEK+ QDEA+ +ISQTIA RT +E H G+S +RDIWFNF GPD C
Sbjct: 698 DPTSFKMLVRALTEKVSCQDEAVHLISQTIAHYRTRNERHQGSSLKRDIWFNFLGPDRCS 757
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
KRKIA ALAEII+G EN I ADL PQDG +N + + V V FRGKT+ DYVA
Sbjct: 758 KRKIAAALAEIIFGSSENLISADLSPQDGIVN----MHSEEVHAYDVMFRGKTIIDYVAG 813
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
EL KKPL+VV+LENVDKADV QNSLS+AI+TGK DS+GREV ++NAIFVT S+ +D
Sbjct: 814 ELGKKPLAVVFLENVDKADVQAQNSLSRAIRTGKFSDSHGREVGINNAIFVTTSTLGDDK 873
Query: 471 RILPSEMKD-CKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM-SHQKLLN 528
++ S KD +SEE+I R K + Q+LIE A + Q L+ S + S +N
Sbjct: 874 KL--SSTKDFSTYSEERILRIKGQPMQMLIEQAPAEKMV-QNLNHSPVMRKVPSSSVFVN 930
Query: 529 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 588
KRKL+G N N +H TSE+ KRAH++ +R LDLNLPAEE+++ ++++ D N S N+K
Sbjct: 931 KRKLVGANQNVNRHKTSEVAKRAHKTSSRYLDLNLPAEENDMQIIENGDSDNDSMSSNSK 990
Query: 589 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 648
+WLQDF +Q +IV FK F+FDAL E+IL IN SF K VGSECLL+ID KV EQLLAAA
Sbjct: 991 AWLQDFLDQLDRIVVFKPFDFDALGERILTGINDSFHKIVGSECLLDIDSKVTEQLLAAA 1050
Query: 649 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLV 708
YLS RV+E+W+E+VL +GF++ E+YNL+A+SIVKLV+C+G FL+E G LP K++
Sbjct: 1051 YLSPRKRVVEEWMEQVLNKGFVEVLERYNLSAHSIVKLVSCKGLFLDEDMAGGHLPSKII 1110
Query: 709 LN 710
LN
Sbjct: 1111 LN 1112
>gi|225448447|ref|XP_002272110.1| PREDICTED: uncharacterized protein LOC100260392 [Vitis vinifera]
Length = 1105
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 373/727 (51%), Positives = 473/727 (65%), Gaps = 32/727 (4%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
MESFVP GGFF +P E K L G Q SRC QC+EKCEQE+ A SKGGFTAS+ADQ Q
Sbjct: 394 MESFVPLGGFFSSPCELKGQLSGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQP 453
Query: 61 VLPSWLQMAEPDSNKALDL-KTKEDG-LALRSKIT---KKWDDICQSLHRTQSL------ 109
LP+WLQMAE + A D+ K K+DG L L +KI KKWD+ICQ L TQ
Sbjct: 454 NLPAWLQMAELGKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADFY 513
Query: 110 QVGSQFPTVVGFQFLQDKKENANNSGSS-TNASVNGGSYVNVYSGIPIDSENVSASRSVF 168
+VGSQ P+VVGFQ ++D KENA+N SS TNAS + + S + +D + V S
Sbjct: 514 RVGSQVPSVVGFQAVKDSKENADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPST 573
Query: 169 PFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
P VS KN+S LSKL EKSS + GS LS SSV DG R SPT V SVTTDL
Sbjct: 574 PLPLVS--KNESFLSKLFEKSSKTEEHEPGSLQSRTLSTSSVGDG-RTSPTSVNSVTTDL 630
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNC 288
GLGL P S + K+ + + S A V+ + SSS SCPD
Sbjct: 631 GLGLF----YPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWG 686
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDL 348
Q D ++KTLFRALTE+IDWQ EAISVIS+TIA R G+E HGASP+ DIWFNF GPD
Sbjct: 687 QSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDR 746
Query: 349 CGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYV 408
K+KIA+ALAEI+YG +E+FIC DL QDG ++ Q + G +V+FRGK + DY+
Sbjct: 747 FSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKNVVDYI 806
Query: 409 AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVE 468
A EL KKPLSVV+LENVD+AD+ +NSL AI TGK DS+GREVS++NA FVT + F +
Sbjct: 807 AGELSKKPLSVVFLENVDQADLLARNSLFHAINTGKFCDSHGREVSINNATFVTTARFRQ 866
Query: 469 DARILPSEMKDCKFSEEKIYRAKSRLTQILI-----EPALVNRSSSQKLSASETSEGMSH 523
++L S + K+SEE+I RAK QILI E N S LS + T+ G+S+
Sbjct: 867 GDKVLSSGKEPAKYSEERISRAKGLPMQILIGYSHREDDHDNFGHSLSLSIT-TNNGISN 925
Query: 524 QKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDS 583
Q LNKRKL+G ++ +Q +TSEM KRAH++ LDLNLPAEE+E D D
Sbjct: 926 QIFLNKRKLVGSSETLEQSETSEMAKRAHKASNTYLDLNLPAEENEGQDADHVD------ 979
Query: 584 SENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQ 643
N +SWLQ F +Q + V FK F+FDALAEK+L++I+ +F +T+G E LLEI+ KVMEQ
Sbjct: 980 -PNPRSWLQHFSDQIDETVVFKPFDFDALAEKVLREISKTFHETIGPESLLEINTKVMEQ 1038
Query: 644 LLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCL 703
+LAAA S+ + DW+E+VL RGF +A+++YNLTA+ +VKLV CEG F+E+ PGV L
Sbjct: 1039 ILAAACSSDRTGAVGDWVEQVLSRGFAEARKRYNLTAHCVVKLVPCEGIFMEDQAPGVWL 1098
Query: 704 PPKLVLN 710
P +++LN
Sbjct: 1099 PSRIILN 1105
>gi|147783009|emb|CAN72301.1| hypothetical protein VITISV_024923 [Vitis vinifera]
Length = 1166
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 368/727 (50%), Positives = 464/727 (63%), Gaps = 38/727 (5%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
MESFVP GGFF +P E K L G Q SRC QC+EKCEQE+ A SKGGFTAS+ADQ Q
Sbjct: 461 MESFVPLGGFFSSPCELKGQLSGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQP 520
Query: 61 VLPSWLQMAEPDSNKALDL-KTKEDG-LALRSKIT---KKWDDICQSLHRTQSL------ 109
LP+WLQMAE A D+ K K+DG L L +KI KKWD+ICQ L TQ
Sbjct: 521 NLPAWLQMAELGKXTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADFY 580
Query: 110 QVGSQFPTVVGFQFLQDKKENANNSGSS-TNASVNGGSYVNVYSGIPIDSENVSASRSVF 168
+VGSQ P+VVGFQ ++D KENA+N SS TNAS + + S + +D + V S
Sbjct: 581 RVGSQVPSVVGFQAVKDSKENADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPST 640
Query: 169 PFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
P VS KN+S LSKL EKSS + GS LS SSV DG R SPT V SVTTDL
Sbjct: 641 PLPLVS--KNESFLSKLFEKSSKTEEHEPGSLQSRTLSTSSVGDG-RTSPTSVNSVTTDL 697
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNC 288
GLGL P S + K+ + + S A V+ + SSS SCPD
Sbjct: 698 GLGLF----YPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWG 753
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDL 348
Q D ++KTLFRALTE+IDWQ EAISVIS+TIA R G+E HGASP+ DIWFNF GPD
Sbjct: 754 QSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDR 813
Query: 349 CGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYV 408
K+KIA+ALAEI+YG +E+FIC DL QDG ++ Q + G +V+FRGK + DY+
Sbjct: 814 FSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKNVVDYI 873
Query: 409 AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVE 468
A EL KKPLSVV+LENVD+AD+ +NSL AI TGK DS+GREVS++NA FVT + F +
Sbjct: 874 AGELSKKPLSVVFLENVDQADLLARNSLFHAINTGKFCDSHGREVSINNATFVTTARFRQ 933
Query: 469 DARILPSEMKDCKFSEEKIYRAKSRLTQILI-----EPALVNRSSSQKLSASETSEGMSH 523
++L S + K+SEE+I RAK QILI E N S LS + T+ G+S+
Sbjct: 934 GDKVLSSGKEPAKYSEERISRAKGLPMQILIGYSHREDDHDNFGHSLSLSIT-TNNGISN 992
Query: 524 QKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDS 583
Q LNKRKL+G ++ +Q +TSEM KRAH++ LDLNLPAEE+E D D N
Sbjct: 993 QIFLNKRKLVGSSETLEQSETSEMAKRAHKASNTYLDLNLPAEENEGQDADHVDPDNDIP 1052
Query: 584 SENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQ 643
T V FK F+FDALAEK+L++I+ +F +T+G E LLEI+ KVMEQ
Sbjct: 1053 PLKTP-------------VVFKPFDFDALAEKVLREISKTFHETIGPESLLEINTKVMEQ 1099
Query: 644 LLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCL 703
+LAAA S+ + DW+E+VL RGF +A+++YNLTA+ +VKLV CEG F+E+ PGV L
Sbjct: 1100 ILAAACSSDRTGAVGDWVEQVLSRGFAEARKRYNLTAHCVVKLVPCEGIFMEDQAPGVWL 1159
Query: 704 PPKLVLN 710
P +++LN
Sbjct: 1160 PSRIILN 1166
>gi|224112493|ref|XP_002316209.1| predicted protein [Populus trichocarpa]
gi|222865249|gb|EEF02380.1| predicted protein [Populus trichocarpa]
Length = 628
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 323/627 (51%), Positives = 409/627 (65%), Gaps = 16/627 (2%)
Query: 92 ITKKWDDICQSLHRTQ---SLQVGSQFPTVVGFQFLQDKKENANN-SGSSTNASVNGGSY 147
+ +KWD ICQ LH TQ S QFP V GFQ ++D+KE+A N S T+A NG
Sbjct: 10 LQRKWDSICQRLHHTQPPGSNTHPPQFPAVTGFQLVEDEKEDAENLSSKDTSALPNGNRC 69
Query: 148 VNVYSGIPIDSENVSASRSVFPFHTVSGAKNDSLLSKLREK-SSNADLDSGGSRSPCCLS 206
VNV S IP D + S + F VS A++DS+LSK EK S D S G RSP S
Sbjct: 70 VNVNSYIPSDLQKKSRKQLGFSLPVVSEARSDSILSKQWEKPSKEEDHGSSGLRSPYSFS 129
Query: 207 NSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSAT 266
NS DGS+ SPT VTSV TDLGL + IG+ E K+ ++++ E Q+LSG SA
Sbjct: 130 NSCTVDGSQASPTSVTSVVTDLGLRISSIGT-----ELKKTVNQNHMELPQDLSGSFSAN 184
Query: 267 ---VNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQR 323
V+G IS+ A+SSSSS P QFD SN K LFRA+ E++ WQDEAI +ISQTIA
Sbjct: 185 IDLVHGGISDHQARSSSSSSPVFGGQFDPSNAKMLFRAVVERVGWQDEAIRIISQTIAHC 244
Query: 324 RTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNN 383
R +E GAS R DIWF+F GPD CGK+KIA ALAE+IYG +ENFI ADL QDG M
Sbjct: 245 RAINEKRQGASLRGDIWFSFCGPDRCGKKKIASALAEVIYGSRENFISADLSSQDG-MVA 303
Query: 384 PPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTG 443
F + G +V+FRGKT+ D+VA EL KKPLS+V+LEN+DKADV Q SLS+AIQTG
Sbjct: 304 HMVFDRPEMSGYTVKFRGKTMVDFVAGELCKKPLSIVFLENIDKADVQAQKSLSQAIQTG 363
Query: 444 KLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL 503
K DS+GREV +SNAIFVT S+ ED ++ S +SEE+I +AK +ILIE L
Sbjct: 364 KFADSHGREVGISNAIFVTTSTLTED-KVGSSSNDFSTYSEERILKAKDWPMKILIERVL 422
Query: 504 VNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNL 563
+ Q ++ + + LNKRKL+G N N + + +EMVKRAH+ RNLDLNL
Sbjct: 423 -DEEMGQVITPITAKKDIPSSIFLNKRKLVGANQNLDRQEITEMVKRAHKMSARNLDLNL 481
Query: 564 PAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINAS 623
PA E+++ D + N S+ +K+WLQ F Q V FK F+FDALAE+IL ++N
Sbjct: 482 PAGENDLPDTDDGNSDNDPESDISKAWLQGFLEQVDARVFFKPFDFDALAERILNEVNGC 541
Query: 624 FRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSI 683
F K VG ECLL+ID KVMEQLLAA YLS+ NRV+EDW+E+VL GF++ +++L ANSI
Sbjct: 542 FHKIVGWECLLDIDPKVMEQLLAATYLSDQNRVVEDWVEQVLGWGFVEVLRRHSLNANSI 601
Query: 684 VKLVACEGHFLEELTPGVCLPPKLVLN 710
VKLVAC+ FLE PGV LP K+++N
Sbjct: 602 VKLVACKSLFLEGRMPGVYLPTKIIIN 628
>gi|449499195|ref|XP_004160747.1| PREDICTED: uncharacterized LOC101216395 [Cucumis sativus]
Length = 1109
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 329/727 (45%), Positives = 459/727 (63%), Gaps = 33/727 (4%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVP GGFF TPS+ PL Q+ SRC QC + CE+E+IA+SKG FT +++Q QS
Sbjct: 393 MGSFVPLGGFFSTPSDATIPLNVSYQHPSRCLQCDKSCEEEVIAASKGVFTPPLSEQYQS 452
Query: 61 VLPSWLQMAEPDSNKALDLKTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFPT 117
LPSW+QM E + A D KT++DGL L +KI KKWD+ICQ LH L+ FPT
Sbjct: 453 SLPSWMQMTELSNFDAFDAKTRDDGLVLSAKIAGFQKKWDNICQRLHHGPPLKEAPMFPT 512
Query: 118 VVGFQFLQDKKENAN--NSGSSTNASVNGGSYVNVYSGIPIDSENVSASRS-VFPFHTVS 174
VVGF +DK+E+A NS +S AS + S ++ S +D VS RS FP +S
Sbjct: 513 VVGFHATEDKREDAAVINSSTSACASSHKDSPTDLNSRNFMDLPKVSLLRSNTFP---LS 569
Query: 175 G-AKNDSLLSKLREKSSNAD-LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGL 232
G A N++ LSKL+E + + L+ SP LS SSVDD +R S SVTTDLGLG+
Sbjct: 570 GKASNENFLSKLQEGTPKIENLELRSRNSPFSLSISSVDDENRTSSPSAGSVTTDLGLGI 629
Query: 233 LGIGSAPTSNEPKEPISKDLTERSQELSGCCSATV---NGSISNQLA-QSSSSSCPDLNC 288
+ S PTS + K+P++ + +LSGCCS V NG + N SS SS P+
Sbjct: 630 V---SLPTSYKLKKPLNPKSADFPSDLSGCCSTNVDLVNGRVCNGFTPSSSCSSSPEQRG 686
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDL 348
Q + + K+LFR L E++ WQD+A+S+ISQTI+QR+ HG++ R DIWFNF GPD
Sbjct: 687 QVNAMDVKSLFRLLKERVFWQDQAVSIISQTISQRQ-----RHGSNLRGDIWFNFVGPDK 741
Query: 349 CGKRKIAIALAEIIYGGKENFICADLCPQDGEMN-NPPKFYHQVVGGDSVQFRGKTLADY 407
GK+++ IA+AEI+YG K+ FIC DL QDG +N N P+ V S +FRGKT+ D+
Sbjct: 742 FGKKRVGIAVAEIMYGNKDQFICVDLSSQDGMVNPNTPR-----VRSYSAEFRGKTVLDF 796
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-SF 466
VA EL K+PLS+V LENVDKA++ QN LS+AIQTGKL D GREVS+ NAIF+T + S
Sbjct: 797 VAAELRKQPLSIVMLENVDKAELLDQNRLSQAIQTGKLSDLQGREVSIKNAIFMTTTTSL 856
Query: 467 VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKL 526
+ + +I + K+SE+++ +AKS +I + + ++++ K + + +
Sbjct: 857 ITEHQITFPNKQMLKYSEKRLLKAKSWPLRIQVASSFGDQTNRSKTVSDTERKSTPNPFF 916
Query: 527 LNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNL--DLNLPAEEDEVLVLDSDDDRNSDSS 584
++KRKL + + H+ SEMVKR++++PT N DLN PAEE+ +D D N +S
Sbjct: 917 MSKRKLNVIDGSSDHHEISEMVKRSNKTPTSNKFPDLNRPAEENPQHDIDGDWTDNDSTS 976
Query: 585 ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQL 644
E +K+WLQ+F N ++V FK F+FD LAEKI KD+ F G E +LEID VMEQL
Sbjct: 977 EISKTWLQEFCNHIDQVVVFKPFDFDGLAEKIQKDVKKIFHSVFGPEYMLEIDSMVMEQL 1036
Query: 645 LAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHF-LEELTPGVCL 703
LAAAY+S N+ ++DW+E+VL R FL+ + + L++ SI++L C+ LEE T VCL
Sbjct: 1037 LAAAYISYGNKDVDDWMEQVLSRKFLEVKRTHILSSYSIIELTTCDQELSLEEKTAEVCL 1096
Query: 704 PPKLVLN 710
P +++ +
Sbjct: 1097 PQRIIFD 1103
>gi|449441584|ref|XP_004138562.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216395
[Cucumis sativus]
Length = 1123
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 329/749 (43%), Positives = 459/749 (61%), Gaps = 55/749 (7%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVP GGFF TPS+ PL Q+ SRC QC + CE+E+IA+SKG FT +++Q QS
Sbjct: 385 MGSFVPLGGFFSTPSDATIPLNVSYQHPSRCLQCDKSCEEEVIAASKGVFTPPLSEQYQS 444
Query: 61 VLPSWLQMAEPDSNKALDLK----------------------TKEDGLALRSKIT---KK 95
LPSW+QM E + A D K T++DGL L +KI KK
Sbjct: 445 SLPSWMQMTELSNFDAFDAKIEAIYLSISILFISHSSWCFVQTRDDGLVLSAKIAGFQKK 504
Query: 96 WDDICQSLHRTQSLQVGSQFPTVVGFQFLQDKKENAN--NSGSSTNASVNGGSYVNVYSG 153
WD+ICQ LH L+ FPTVVGF +DK+E+A NS +S AS + S ++ S
Sbjct: 505 WDNICQRLHHGPPLKEAPMFPTVVGFHATEDKREDAAVINSSTSACASSHKDSPTDLNSR 564
Query: 154 IPIDSENVSASRS-VFPFHTVSG-AKNDSLLSKLREKSSNAD-LDSGGSRSPCCLSNSSV 210
+D VS RS FP +SG A N++ LSKL+E + + L+ SP LS SSV
Sbjct: 565 NFMDLPKVSLLRSNTFP---LSGKASNENFLSKLQEGTPKIENLELRSRNSPFSLSISSV 621
Query: 211 DDGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATV--- 267
DD +R S SVTTDLGLG++ S PTS + K+P++ + +LSGCCS V
Sbjct: 622 DDENRTSSPSAGSVTTDLGLGIV---SLPTSYKLKKPLNPKSADFPSDLSGCCSTNVDLV 678
Query: 268 NGSISNQLA-QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTG 326
NG + N SS SS P+ Q + + K+LFR L E++ WQD+A+S+ISQTI+QR+
Sbjct: 679 NGRVCNGFTPSSSCSSSPEQRGQVNAMDVKSLFRLLKERVFWQDQAVSIISQTISQRQ-- 736
Query: 327 HEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN-NPP 385
HG++ R DIWFNF GPD GK+++ IA+AEI+YG K+ FIC DL QDG +N N P
Sbjct: 737 ---RHGSNLRGDIWFNFVGPDKFGKKRVGIAVAEIMYGNKDQFICVDLSSQDGMVNPNTP 793
Query: 386 KFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKL 445
+ V S +FRGKT+ D+VA EL K+PLS+V LENVDKA++ QN LS+AIQTGKL
Sbjct: 794 R-----VRSYSAEFRGKTVLDFVAAELRKQPLSIVMLENVDKAELLDQNRLSQAIQTGKL 848
Query: 446 PDSYGREVSVSNAIFVTAS-SFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALV 504
D GREVS+ NAIF+T + S + + +I + K+SE+++ +AKS +I + +
Sbjct: 849 SDLQGREVSIKNAIFMTTTTSLITEHQITFPNKQMLKYSEKRLLKAKSWPLRIQVASSFG 908
Query: 505 NRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNL--DLN 562
++++ K + + + ++KRKL + + H+ SEMVKR++++PT N DLN
Sbjct: 909 DQTNRSKTVSDTERKSTPNPFFMSKRKLNVIDGSSDHHEISEMVKRSNKTPTSNKFPDLN 968
Query: 563 LPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINA 622
PAEE+ +D D N +SE +K+WLQ+F N ++V FK F+FD LAEKI KD+
Sbjct: 969 RPAEENPQHDIDGDWTDNDSTSEISKTWLQEFCNHIDQVVVFKPFDFDGLAEKIQKDVKK 1028
Query: 623 SFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANS 682
F G E +LEID VMEQLLAAAY+S N+ ++DW+E+VL R FL+ + + L++ S
Sbjct: 1029 IFHSVFGPEYMLEIDSMVMEQLLAAAYISYGNKDVDDWMEQVLSRKFLEVKRTHILSSYS 1088
Query: 683 IVKLVACEGHF-LEELTPGVCLPPKLVLN 710
I++L C+ LEE T VCLP +++ +
Sbjct: 1089 IIELTTCDQELSLEEKTAEVCLPQRIIFD 1117
>gi|225434576|ref|XP_002279036.1| PREDICTED: uncharacterized protein LOC100241532 [Vitis vinifera]
Length = 1106
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 318/726 (43%), Positives = 444/726 (61%), Gaps = 26/726 (3%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPF GFF TP++FKNPL Q+++ C C+EKCEQE+ A KGG T S+AD+
Sbjct: 391 MGSFVPFAGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSG 450
Query: 61 VLPSWLQMAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHRTQSL--QVGSQ 114
LPSWL MAEPD+NK D +K K+DG AL K+ KKW DICQ LH +
Sbjct: 451 TLPSWLLMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLHHAPPYPKSIFQP 510
Query: 115 FPTVVG---FQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFH 171
P V G + F+ D++E ++ S + + GS N+ ++ + +S S+ P
Sbjct: 511 VPQVSGAECYGFIPDRRETSSKDSSPSES----GS-ANLSPSTTMNLQKISPSKIQIPLP 565
Query: 172 TVSGAKNDSLLSKLR---EKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
VS +++ + SKL KS + S SPC L N S+ R S + +TSVTTDL
Sbjct: 566 VVSESESVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAP-DRTSSSCITSVTTDL 624
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLAQSSSSSCPD 285
GLG L A S E K + ER SG SA V+ + S+Q+ QS S S PD
Sbjct: 625 GLGTL---YASNSQETKRLNLQGHKERMNYFSGSVSAEFDVVSVNNSSQIGQSPSCSVPD 681
Query: 286 LNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTG 345
L Q D ++K+L+RAL K+ WQDEAI ISQT++ RTG+ HG++ + DIW +F G
Sbjct: 682 LGGQMDARDFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHGSNLKGDIWLSFLG 741
Query: 346 PDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
PD GK++IA ALAEI++ ++ + DL Q G + F + ++FRGKT+
Sbjct: 742 PDKVGKKRIAAALAEIMFRSSKSLVSVDLGYQHGSNQSNSIFDQHELNSCGIEFRGKTIT 801
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
DY+A EL KKP VV+LEN+DKAD+ VQ SLS+AI+TGK PDS+GRE+S+++ IFVT ++
Sbjct: 802 DYIAGELRKKPQLVVFLENIDKADLLVQTSLSQAIRTGKFPDSHGREISINHMIFVTTAT 861
Query: 466 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASET-SEGMSHQ 524
+ R L S + +FSEE+I AKS +ILI S S ++ T EG S+
Sbjct: 862 SKKGNRNLVSGKEPVEFSEERILGAKSWQMKILIGCVTGEASRSNGMNVLVTPREGTSNP 921
Query: 525 KLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSS 584
K +KRK I +Q EM KRA ++ LDLNLP EE E V DS + + S
Sbjct: 922 KSTSKRKFIDTGSFAEQDKYLEMSKRACKASNSYLDLNLPVEELEEDV-DSANCDSDSLS 980
Query: 585 ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQL 644
E++++WL++F +Q + V FK FNFDA+A+K+LK+I+ +F+K +GS+ LEID +VM Q+
Sbjct: 981 ESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQLEIDSEVMVQI 1040
Query: 645 LAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLP 704
LAAA+LSE ++DW+E+VL + F +A+++Y LTA S+VKLV CEG +EE PGVCLP
Sbjct: 1041 LAAAWLSEKGGAVDDWVEQVLSKSFTEARQRYRLTAQSLVKLVPCEGLSVEEQAPGVCLP 1100
Query: 705 PKLVLN 710
+++LN
Sbjct: 1101 ARIILN 1106
>gi|356569296|ref|XP_003552839.1| PREDICTED: uncharacterized protein LOC100786125 [Glycine max]
Length = 942
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 313/722 (43%), Positives = 432/722 (59%), Gaps = 47/722 (6%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCS-EKCEQEIIASSKGGFTAS-IADQC 58
M+SFVPFGGFF + S+ K PL G V C QC E+CE E++ASSK F+AS AD
Sbjct: 256 MDSFVPFGGFFSSQSDLKAPLSGSFYCVPHCHQCGGERCEHEVLASSKERFSASSAADPH 315
Query: 59 QSVLPSWLQMAEPDSNKALDLKTKEDGLALRSK----ITKKWDDICQSLHRTQSLQVGSQ 114
QS LP WLQ+AE S K L++KTK++G+ L S + K +D + Q LH+ ++
Sbjct: 316 QSNLPPWLQIAEFGSTKGLNVKTKDNGVLLDSSESGSLHKNFDKLSQHLHQRDAIT---- 371
Query: 115 FPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVS 174
FPTVVGF +KK+ ++ SS + S Y+N+ S +P+ + + S+S PF V
Sbjct: 372 FPTVVGFHCGAEKKKEDTDNCSSKSPS----EYINLNSRVPVGMQMMPTSQSSSPFPAVF 427
Query: 175 GAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLG 234
AK + SKL E + G + C +SNSSV DGS+ SPT VTSVTTDLGLG
Sbjct: 428 MAKQEKYNSKLAEMFQKVEDHESGDQRSCNMSNSSVCDGSQMSPTSVTSVTTDLGLG--- 484
Query: 235 IGSAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFD 291
I S+PTSN+ K+P + E +E+ S N G+I +QSSS D Q D
Sbjct: 485 IYSSPTSNKLKKPAVQYTMEPPKEIPSRFSQNFNLADGNILKHSSQSSSCLSFDYCGQVD 544
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGK 351
N K LF L++++ WQDEA+ I +TI T H G + DIW NF G D GK
Sbjct: 545 AKNPKILFEVLSKEVTWQDEALRAIIKTIVCSPTKRVKHRGPNQPGDIWMNFVGSDRLGK 604
Query: 352 RKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWE 411
+KIA++LAE++YG +E+FI DL ++ + G V+FRGKT D++ E
Sbjct: 605 KKIAVSLAELLYGSRESFIFVDLSSEE-------------MKGCDVKFRGKTALDFIVGE 651
Query: 412 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDAR 471
KKPLSVV+LENV+KAD+ QNSLS AI+TGK+ DS+GREVSV+N +FV SF +
Sbjct: 652 CCKKPLSVVFLENVEKADILAQNSLSLAIKTGKISDSHGREVSVNNTMFVF--SFSDYQN 709
Query: 472 ILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETS-EGMSHQKLLNKR 530
L + +SEE+I RAK +I +E ++ SQ +S + S + + +LNKR
Sbjct: 710 SLMPRGEPSNYSEERILRAKGGGIKIKVE-HVIGDIRSQSISVTNNSIHAVPNLNILNKR 768
Query: 531 KLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSD--SSENTK 588
KLIG + H S+ KRAH + LDLNLPAEE+E +D NSD S+EN
Sbjct: 769 KLIGDDKFHDLHFLSDTAKRAHTTSNWLLDLNLPAEENEQ---KQTNDGNSDHVSTENQN 825
Query: 589 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 648
WLQD + + V FK ++F+ALA+++LK I ++F K +GSEC L+I +VM+Q LAA
Sbjct: 826 LWLQDLCDLVDETVVFKPYDFEALADRVLKVIRSNFNKILGSECALQIQTEVMDQFLAAQ 885
Query: 649 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLV 708
Y+S+ +R +E+W+E+VL GF + Q +YNLTA+SIVKL C E GV LPP+++
Sbjct: 886 YVSDRDREVENWVEEVLCEGFTEVQRRYNLTASSIVKLFTC-----PEQAAGVHLPPRII 940
Query: 709 LN 710
L+
Sbjct: 941 LD 942
>gi|224098627|ref|XP_002311226.1| predicted protein [Populus trichocarpa]
gi|222851046|gb|EEE88593.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/494 (54%), Positives = 343/494 (69%), Gaps = 9/494 (1%)
Query: 221 VTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLA- 276
+TSVTTDLGL I S PTSNE K+ ++++ E Q+ SG SA V+GS+S+ A
Sbjct: 1 MTSVTTDLGLR---ISSVPTSNELKKTVNQNHMELPQDRSGSFSANVDVVHGSMSDHWAP 57
Query: 277 QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
SSSSS PD QFDLSN K LFRA+ E++ WQDEAI VISQTIA+ + +E GAS R
Sbjct: 58 SSSSSSSPDYGGQFDLSNAKMLFRAVVERVGWQDEAIRVISQTIARCKARNEKRQGASLR 117
Query: 337 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 396
DIWF+F GPD GK+KIA ALAEIIYG +ENFI ADL QDG ++ F H V G +
Sbjct: 118 GDIWFSFCGPDRRGKKKIASALAEIIYGSRENFISADLSAQDGMIHTHMLFDHPEVNGYT 177
Query: 397 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 456
V+ RGKT+ D+VA EL KKPLS+V+LEN+DKADV Q SLS AIQTGK DS+GRE+ +S
Sbjct: 178 VKLRGKTVVDFVAGELCKKPLSIVFLENIDKADVQAQKSLSHAIQTGKFADSHGREIGIS 237
Query: 457 NAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASE 516
NAIFVT S+ ED ++ S + +SEE+I R + +ILIE AL + + ++
Sbjct: 238 NAIFVTTSTLTED-KVCSSINEFSTYSEERISRVRDWPVKILIEQAL-DDEVGKMVAPFT 295
Query: 517 TSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSD 576
+G+S LNKRKL+G N N + + EMVKRAH++ RNLDLNLPAEE++VL D
Sbjct: 296 LRKGVSGSIFLNKRKLVGANQNLDRQEIKEMVKRAHKTSARNLDLNLPAEENDVLDTDDG 355
Query: 577 DDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEI 636
N +S+N+K+WLQDF + V FK F+FDALAE+IL ++N F K VGSECLL+I
Sbjct: 356 SSDNDHASDNSKAWLQDFLEKIDARVFFKPFDFDALAERILNELNGCFHKIVGSECLLDI 415
Query: 637 DRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEE 696
D KV EQLLAAAYLS+ RV+EDW+E+VL GF++ +Y L ANSIVKLVAC+G F+EE
Sbjct: 416 DPKVTEQLLAAAYLSDRKRVVEDWVEQVLGWGFVEVLRRYKLKANSIVKLVACKGLFVEE 475
Query: 697 LTPGVCLPPKLVLN 710
G LP K++++
Sbjct: 476 RMSGDHLPTKIIIS 489
>gi|147866119|emb|CAN78825.1| hypothetical protein VITISV_006557 [Vitis vinifera]
Length = 1088
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 305/726 (42%), Positives = 428/726 (58%), Gaps = 44/726 (6%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPF GFF TP++FKNPL Q+++ C C+EKCEQE+ A KGG T S+AD+
Sbjct: 391 MGSFVPFAGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSG 450
Query: 61 VLPSWLQMAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHRTQSL--QVGSQ 114
LPSWL MAEPD+NK D +K K+DG AL K+ KKW DICQ LH +
Sbjct: 451 TLPSWLLMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLHHAPPYPKSIFQP 510
Query: 115 FPTVVG---FQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFH 171
P V G + F+ D++E ++ S + + GS N+ ++ + +S S+ P
Sbjct: 511 VPQVSGAECYGFIPDRRETSSKDSSPSES----GS-ANLSPSTTMNLQKISPSKIQIPLP 565
Query: 172 TVSGAKNDSLLSKLR---EKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
VS + + + SKL KS + S SPC L N S+ R S + +TSVTTDL
Sbjct: 566 VVSESXSVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAP-DRTSSSCITSVTTDL 624
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLAQSSSSSCPD 285
GLG L A S E K + ER SG SA V+ + S+Q+ QS S S PD
Sbjct: 625 GLGTL---YASNSQETKRLNLQGHKERMNYFSGSVSAEFDVVSVNNSSQIGQSPSCSVPD 681
Query: 286 LNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTG 345
L Q D ++K+L+RAL A +V+ + HG++ + DIW +F G
Sbjct: 682 LGGQMDARDFKSLWRAL---------ATAVLEM---------QGVHGSNLKGDIWLSFLG 723
Query: 346 PDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
PD GK++IA ALAEI++ + + DL Q G + F + ++FRGKT+
Sbjct: 724 PDKVGKKRIAAALAEIMFRSSXSLVSVDLGYQHGSNQSNSIFDQHELNSCGIEFRGKTIT 783
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
DY+A EL KKP VV+LEN+DKAD+ Q SLS+AI+TGK PDS+GRE+S+++ IFVT ++
Sbjct: 784 DYIAGELRKKPQXVVFLENIDKADLLXQTSLSQAIRTGKFPDSHGREISINHMIFVTTAT 843
Query: 466 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASET-SEGMSHQ 524
+ R L S + +FSEE+I AKS +ILI S S ++ T EG S+
Sbjct: 844 SKKGNRNLVSGKEPVEFSEERILGAKSWQMKILIGCVTGEASRSNGMNVLVTPREGTSNP 903
Query: 525 KLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSS 584
K +KRK I +Q EM KRA ++ LDLNLP EE E V DS + + S
Sbjct: 904 KSTSKRKFIDTGSFAEQDKYLEMSKRACKASNSYLDLNLPVEELEEDV-DSANCDSDSLS 962
Query: 585 ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQL 644
E++++WL++F +Q + V FK FNFDA+A+K+LK+I+ +F+K +GS+ LEID +VM Q+
Sbjct: 963 ESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQLEIDSEVMVQI 1022
Query: 645 LAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLP 704
LAAA+LSE ++DW+E+VL + F +A+++Y LTA S+VKLV CEG +EE PGVCLP
Sbjct: 1023 LAAAWLSEKGGAVDDWVEQVLSKSFTEARQRYRLTAQSLVKLVPCEGLSVEEQAPGVCLP 1082
Query: 705 PKLVLN 710
+++LN
Sbjct: 1083 ARIILN 1088
>gi|297745889|emb|CBI15945.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 290/717 (40%), Positives = 397/717 (55%), Gaps = 132/717 (18%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPF GFF TP++FKNPL Q+++ C C+EKCEQE+ A KGG T S+AD+
Sbjct: 364 MGSFVPFAGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSG 423
Query: 61 VLPSWLQMAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFP 116
LPSWL MAEPD+NK D +K K+DG AL K+ KKW DICQ LH +P
Sbjct: 424 TLPSWLLMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLHH------APPYP 477
Query: 117 TVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGA 176
+++ +P P VS +
Sbjct: 478 K-------------------------------SIFQPVP-----------QIPLPVVSES 495
Query: 177 KNDSLLSKLR---EKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLL 233
++ + SKL KS + S SPC L N S+ R S + +TSVTTDLGLG L
Sbjct: 496 ESVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAP-DRTSSSCITSVTTDLGLGTL 554
Query: 234 GIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLS 293
A S E K + ER SG Q D
Sbjct: 555 ---YASNSQETKRLNLQGHKERMNYFSG---------------------------QMDAR 584
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRK 353
++K+L+RAL K+ WQDEAI ISQT++ RTG+ HG++ + DIW +F GPD GK++
Sbjct: 585 DFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHGSNLKGDIWLSFLGPDKVGKKR 644
Query: 354 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IA ALAEI++ ++ + DL Q G +FRGKT+ DY+A EL
Sbjct: 645 IAAALAEIMFRSSKSLVSVDLGYQHG------------------KFRGKTITDYIAGELR 686
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
KKP VV+LEN+DKAD+ VQ SLS+AI+TGK PDS+GRE+S+++ IFVT ++ + R L
Sbjct: 687 KKPQLVVFLENIDKADLLVQTSLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNL 746
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLI 533
S + +FSEE+I AKS +ILI V +S+ S GM+ K L
Sbjct: 747 VSGKEPVEFSEERILGAKSWQMKILI--GCVTGEASR-------SNGMNQDKYL------ 791
Query: 534 GRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQD 593
EM KRA ++ LDLNLP EE E V DS + + SE++++WL++
Sbjct: 792 ------------EMSKRACKASNSYLDLNLPVEELEEDV-DSANCDSDSLSESSEAWLEE 838
Query: 594 FFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSES 653
F +Q + V FK FNFDA+A+K+LK+I+ +F+K +GS+ LEID +VM Q+LAAA+LSE
Sbjct: 839 FLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEK 898
Query: 654 NRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 710
++DW+E+VL + F +A+++Y LTA S+VKLV CEG +EE PGVCLP +++LN
Sbjct: 899 GGAVDDWVEQVLSKSFTEARQRYRLTAQSLVKLVPCEGLSVEEQAPGVCLPARIILN 955
>gi|224106239|ref|XP_002314097.1| predicted protein [Populus trichocarpa]
gi|222850505|gb|EEE88052.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 293/724 (40%), Positives = 409/724 (56%), Gaps = 80/724 (11%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
+ SFVPFGGFF TPS+FK P + Q+++RC C+ K EQ++ A K G T S+A+QC
Sbjct: 405 LGSFVPFGGFFSTPSDFKIPSNSINQSITRCHLCNAKYEQDVAAILKMGPTISVAEQCSE 464
Query: 61 VLPSWLQMAEPDSNKALDL-KTKEDGLALRSKI---TKKWDDICQSLHRTQSL------Q 110
LPS LQMAE D+ KA+D+ KTK+DG +L +KI +WDDICQ LH Q Q
Sbjct: 465 NLPSSLQMAELDTRKAVDMVKTKDDGTSLNAKILGLQNRWDDICQRLHHAQPFSKFDVSQ 524
Query: 111 VGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPF 170
SQ GFQ+L K +
Sbjct: 525 ATSQAAIAEGFQYLTGK------------------------------------------Y 542
Query: 171 HTVSGAKNDSLLSKLREKSSNADLDSGGS--RSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
VS +N + SKL E+ + S +P ++N S+ R S VTSVTTDL
Sbjct: 543 CAVSEVENVNHQSKLLEEVPRCQQEEKESPWLTPNPMANVSLPT-DRTSSFSVTSVTTDL 601
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLT---ERSQELSGCCSATVNGSISNQLAQSSSSSCPD 285
GLG L S +E I+ L E + SG S + + S Q+AQSSS S P
Sbjct: 602 GLGTLYASST------RELITTKLCDPREHQEHFSGSSSVEYDDNTSLQIAQSSSCSGPS 655
Query: 286 LNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTG 345
QF+L N+K++ RAL+E++ WQD A IS+ +++ + GH HHG++ + DI F F G
Sbjct: 656 SGGQFNLRNFKSVMRALSEQVGWQDRATLAISEAVSRCKAGHGRHHGSNSKGDISFAFLG 715
Query: 346 PDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
PD GK+KIA ALA +++G ++F+ DL G++N+ D R T
Sbjct: 716 PDRIGKKKIASALAMVMFGSIQSFVSMDLGSH-GKVNSSNSMLESQELHDDELGRSTTFV 774
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
DY+A +L KKP S+++LENVDKAD VQNSLS A++TGK PDS GREVS ++ IFV S+
Sbjct: 775 DYIASKLSKKPHSLIFLENVDKADPLVQNSLSYALRTGKFPDSRGREVSTNSTIFVATST 834
Query: 466 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQK 525
L SE + +FSEE I RAKS QIL+E V ++++ +S+
Sbjct: 835 ITVGNTNLLSERETIRFSEEMILRAKSWQMQILVEH--VAEAATKSISSG---------- 882
Query: 526 LLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSE 585
NKRKL +D+ +Q T E KRAH+ LDLNLP E+ SD+D +S SE
Sbjct: 883 --NKRKLDVTSDSMEQESTCESSKRAHKPLRSYLDLNLPVEDTGECANCSDNDSDS-ISE 939
Query: 586 NTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLL 645
++++WL+ F +Q + V FK F+FD+LAEK +K+I+ ++ GSE LLEID +VM Q+L
Sbjct: 940 SSQAWLEYFSDQVDEKVVFKPFDFDSLAEKTMKEISKQCQRVFGSEVLLEIDHEVMVQIL 999
Query: 646 AAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPP 705
AA++LSE R + DW+E+V+ RGF +A++K A IVKLV C+G ++E PG+CLP
Sbjct: 1000 AASWLSEKKRAMGDWIEEVVGRGFSEAKQKSQAGAQCIVKLVTCKGLVVKEQAPGICLPS 1059
Query: 706 KLVL 709
++ L
Sbjct: 1060 RINL 1063
>gi|357461271|ref|XP_003600917.1| Chaperone protein clpB [Medicago truncatula]
gi|355489965|gb|AES71168.1| Chaperone protein clpB [Medicago truncatula]
Length = 1081
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 297/720 (41%), Positives = 422/720 (58%), Gaps = 39/720 (5%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M+SFVP GGFF + S+ + PL G V Q EKCE E++ +S F+ S D S
Sbjct: 391 MDSFVPLGGFFSSQSDLRGPLNGSFGCVPHDNQFGEKCEHEVLGASNERFSVSAPDPYPS 450
Query: 61 VLPSWLQMAEPDSNKALDLKTKEDGLALRSKIT----KKWDDICQSLHRTQSLQVGSQFP 116
LP WL+ E + K L +KTK+DG+ S + D+ICQ LH Q + +
Sbjct: 451 NLPQWLKTTEFGTTKTLTVKTKDDGVLGDSSESCTPRNNLDNICQVLH--QRIPKANTCH 508
Query: 117 TVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGA 176
TVVGF +K E+A+N SS + Y+N+ S P+ + +SA +S F + A
Sbjct: 509 TVVGFHCADNKNEDADNH-SSKIVDKSSKEYINLNSHAPVGVQTMSALQSSNSFPSFFLA 567
Query: 177 KNDSLLSKLREKSSNA-DLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGI 235
K + L + N DL+SG RS C +S+SSV DGS+ SPT VTSVTTDLGLG I
Sbjct: 568 KQVKNIPNLTDMFQNVKDLESGDLRS-CNISSSSVSDGSQLSPTSVTSVTTDLGLG---I 623
Query: 236 GSAPTSNEPKEPISKDLTERSQELSGCCSATVNGS---ISNQLAQSSSSSCPDLNCQFD- 291
S+PTSN+ + + E +E+ +++ N I + +QSSS D Q D
Sbjct: 624 CSSPTSNKLTKAAVQYTMEPPKEIPNRFTSSFNLDEEIIRMRPSQSSSCLTFDYYQQADD 683
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGK 351
N K LF AL++ + WQDEAI I +TI T HG + R D W NF GPD GK
Sbjct: 684 ARNPKVLFEALSKAVRWQDEAIRAIIKTIVCGSTKSAKDHGLNQRGDKWMNFVGPDRHGK 743
Query: 352 RKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWE 411
+KIA++LAE++YG +ENF DL + EMN G +V+FRGK+ D++ E
Sbjct: 744 KKIAVSLAELLYGSRENFTFVDLSSK--EMN-----------GCNVKFRGKSHLDFLVDE 790
Query: 412 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDAR 471
KKPLSVV++ENVDKAD+ Q+SLS+AI+TGK+ DS+GREVS +NAIFV + S +++
Sbjct: 791 CCKKPLSVVFIENVDKADIVAQSSLSQAIKTGKITDSHGREVSANNAIFVFSFSGYQNSL 850
Query: 472 ILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM-SHQKLLNKR 530
+ E + +SEE++ + +I +E +V +Q + S + + +NKR
Sbjct: 851 MQTREPSN--YSEERMLSVRGGGIKIKVE-HMVRDIRNQSIGVPNNSINIIPNLNFINKR 907
Query: 531 KLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSW 590
KLIG N+ H ++ KRAH + R LDLNLPAEE+E D D + S+EN W
Sbjct: 908 KLIGDNELHDPHLLADAAKRAHTTSNRLLDLNLPAEENEQKQTD-DGNFEHVSTENQNLW 966
Query: 591 LQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYL 650
LQD +NQ + V FK ++FD+L +++LK + +F K +GSEC L+I +VM+QLLAAAY+
Sbjct: 967 LQDLYNQVDETVVFKPYDFDSLDDRVLKLVRNNFNKILGSECALQIQTEVMDQLLAAAYV 1026
Query: 651 SESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVLN 710
S+S+ +E+W+++VL GF + + +YNLTA+SIVKLV C E V LPP++VL+
Sbjct: 1027 SDSDTEVENWVQQVLYGGFTEVRRRYNLTASSIVKLVTC-----PEQASSVHLPPRIVLD 1081
>gi|356569527|ref|XP_003552951.1| PREDICTED: uncharacterized protein LOC100776148 [Glycine max]
Length = 1097
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 292/744 (39%), Positives = 408/744 (54%), Gaps = 69/744 (9%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQN---VSRCQQCSEKCEQEIIASSKGGFTASIADQ 57
M SFVPFGGFF TPSEFK+PL C N +SRC C+EKCEQE+ K G S +
Sbjct: 389 MGSFVPFGGFFSTPSEFKSPLS--CTNASSLSRCDSCNEKCEQEVADILKVGPATSASGY 446
Query: 58 CQSVLPSWLQMAEPDSNKALDL---------KTKEDGLALRSKI---TKKWDDICQSLHR 105
+ LP WLQ DS++ LD+ +T E+ +L KI +KW DICQ LH+
Sbjct: 447 SSTSLP-WLQKVNVDSDRRLDVAKNELHHPVQTNEENTSLNKKIFGLQRKWSDICQRLHQ 505
Query: 106 TQSL------QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGG-SYVNVYSGIPIDS 158
+SL + Q + GFQF GSS+ ++ Y N S + S
Sbjct: 506 NRSLPEFDITKARFQATSHEGFQF---------GPGSSSKGPLHSEIQYPNQISYMSKVS 556
Query: 159 ENVSASRSVFP----FHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGS 214
++ + + P F TVS + K+ + + G SP +N S+ D +
Sbjct: 557 QSAFPFKQILPVSVPFDTVSITDEADHIPKVSKSHMH-----GTWISPSPKANMSLLDPT 611
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSI 271
S +T VTTDLGLG + +A +EP P D + LS S +N S
Sbjct: 612 TSSS--LTPVTTDLGLGTIYTSAA---HEPDTPKLSDHKKPLHHLSDSLSTDFDAMNEST 666
Query: 272 SNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ-RRTGHEDH 330
S+Q+A+SSS S P+L +F+ ++K+ + LTEK+ WQDEAI I++T+++ R +
Sbjct: 667 SHQIARSSSCSGPNLEGRFETVDFKSFYHLLTEKVGWQDEAIYAINRTVSRCRSCAGKRS 726
Query: 331 HGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQ 390
G+ R DIW F GPD GKRK+A ALAEI++G K++ I DL QD F Q
Sbjct: 727 SGSHVRADIWLAFLGPDRLGKRKVASALAEILFGNKQSLITVDLSSQDRSYPTNSIFEFQ 786
Query: 391 VVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYG 450
V R KT+ DYVA EL KKP SVV+LENVD+AD VQNSL +AI+TGK P S+G
Sbjct: 787 NTYCHDVLMR-KTVLDYVAGELSKKPHSVVFLENVDQADFLVQNSLFQAIKTGKFPYSHG 845
Query: 451 REVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL--VNRSS 508
RE+S++NA+F+ SS + + E F EE+I AK Q+ + A RS
Sbjct: 846 REISINNAMFIVTSSVFKGSGSFSLEGDPKMFPEERILEAKRCQMQLSLGHASEDAKRSG 905
Query: 509 SQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHD--TSEMVKRAHRSPTRNLDLNLPAE 566
+ ++ +G S LNKRKLI D+ ++ T + V A RS LDLN+P E
Sbjct: 906 CTNVKVAQ-RKGTSKTTFLNKRKLIESGDSKEKASCKTLKQVGEASRS---YLDLNMPLE 961
Query: 567 EDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRK 626
E E + N+ + + +WL D +Q + V FK FNFD++AEK++K I+ F+K
Sbjct: 962 EVE--------EGNNYNDYESDAWLNDLCDQVDEKVVFKPFNFDSIAEKVIKSIDTQFQK 1013
Query: 627 TVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKL 686
+GSE +LEI+ +VM Q+LAAA+LS+ + +EDW+E VL R +A +KY ++KL
Sbjct: 1014 MLGSEFILEIEYEVMTQILAAAWLSDKKKAVEDWVEHVLGRSLAEAHQKYRFVPEFVMKL 1073
Query: 687 VACEGHFLEELTPGVCLPPKLVLN 710
V CE FLEE +PGVCLP ++ LN
Sbjct: 1074 VNCERIFLEEQSPGVCLPARINLN 1097
>gi|356541735|ref|XP_003539329.1| PREDICTED: uncharacterized protein LOC100805591 [Glycine max]
Length = 825
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 296/747 (39%), Positives = 413/747 (55%), Gaps = 64/747 (8%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVS------RCQQCSEKCEQEIIASSKGGFTASI 54
M SFVPFGGFF TPSEFKNP+ C N S RC C+E CEQE+ K G A+
Sbjct: 106 MGSFVPFGGFFSTPSEFKNPVS--CTNASSSSLLTRCDTCNESCEQEVADILKVGPAATS 163
Query: 55 ADQCQSVLPSWLQMAEPDSNKALDL---------KTKEDGLALRSKI---TKKWDDICQS 102
S LQ DS++ LD+ +T E+ +L KI +KW DICQ
Sbjct: 164 TSVYSSTSLPRLQKVNVDSDRGLDVAKNELHHPVQTNEENTSLNIKIFGLQRKWSDICQR 223
Query: 103 LHRTQSL------QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGG-SYVNVYSGIP 155
LH+ +SL + Q P+ GFQF GSS+ ++ Y + S +
Sbjct: 224 LHQNRSLPEFDITKTRFQAPSHEGFQF---------GPGSSSRGPLHSEIQYSDHISYMS 274
Query: 156 IDSENVSASRSVFP----FHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVD 211
+S++ + + P F TVS + K+ S D+ G SP +N S+
Sbjct: 275 KESQSAFPFKQILPVSVPFDTVSITDEADQIPKV----SKTDMH-GTWVSPSPKANISLL 329
Query: 212 DGSRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVN 268
D + S VT VTTDLGLG + +A +EP P D + LS S +N
Sbjct: 330 DPTTFSS--VTPVTTDLGLGTIYTSAA---HEPDTPKLSDHKKPLHHLSDSLSTDFDAMN 384
Query: 269 GSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH- 327
+ S+Q+A+SSS S P+L +F+ ++K+L+ LTEK+ WQDEAI I++T+++ R+G
Sbjct: 385 ENTSHQIARSSSCSGPNLEGRFETVDFKSLYHLLTEKVGWQDEAIYAINRTVSRCRSGAG 444
Query: 328 EDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKF 387
+ G+ R DIW F GPD GKRKIA ALAEI++G K++ I DL QD + F
Sbjct: 445 KLSSGSHVRADIWLAFLGPDRLGKRKIASALAEILFGNKQSLITVDLSSQDRCYPSYSIF 504
Query: 388 YHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPD 447
Q V R KT+ DY+A EL KKP SVV+LENVD+AD VQNSL AI+TGK P
Sbjct: 505 EFQNSYCHDVLMR-KTVLDYIAGELSKKPHSVVFLENVDQADFLVQNSLFHAIKTGKFPY 563
Query: 448 SYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL--VN 505
S+GRE+S++NA+F+ SS + + E F EE+I AK Q+ + A
Sbjct: 564 SHGREISINNAMFIVTSSVFKSSGSFNLEEDPKMFPEERILEAKRCQMQLSLGHASEGAK 623
Query: 506 RSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQH--DTSEMVKRAHRSPTRNLDLNL 563
RS + +E +G S L+KRKLI D + T + V+ A RS LDLN+
Sbjct: 624 RSGCTNVKVAE-RKGKSKTTFLSKRKLIESGDLKDKAPCKTLKPVREASRS---YLDLNM 679
Query: 564 PAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINAS 623
P EE E + +DD + EN+ +WL D +Q + V FK FNFD++AE+++K I+
Sbjct: 680 PLEEVEEGN-NYNDDESESIVENSGAWLNDLCDQVDEKVVFKPFNFDSIAEQVIKSIDTQ 738
Query: 624 FRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSI 683
F+K +GSE +LEI+ +VM Q+LAAA+LS+ + +EDW+E VL R F +A +KY+ +
Sbjct: 739 FQKMLGSEFILEIEYEVMTQILAAAWLSDKKKSLEDWVEHVLGRSFGEAHQKYHFAPEFV 798
Query: 684 VKLVACEGHFLEELTPGVCLPPKLVLN 710
+KLV CE FLEE +PGVCLP ++ LN
Sbjct: 799 MKLVNCERFFLEEQSPGVCLPARINLN 825
>gi|356498951|ref|XP_003518309.1| PREDICTED: uncharacterized protein LOC100804458 [Glycine max]
Length = 1097
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/741 (39%), Positives = 417/741 (56%), Gaps = 59/741 (7%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPFGGFF TP E ++P+ +RC C++KCEQE+ K G S
Sbjct: 385 MGSFVPFGGFFSTP-EIRSPVSCTNAPFTRCDTCNKKCEQEVADLLKVG-----PSSSNS 438
Query: 61 VLPSWLQ-MAEPDSNKALD---------LKTKEDGLALRSKI---TKKWDDICQSLHRTQ 107
WLQ + ++++ D ++T E+ +L KI KKW+DICQ LH T
Sbjct: 439 TSSPWLQKVVNVETHRGSDAAKNELHHLVQTNEENTSLNDKILGFQKKWNDICQRLHHTS 498
Query: 108 SL------QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENV 161
SL Q SQ PT+ +F D KE+ SS + S N Y + S +P + +
Sbjct: 499 SLPQFDISQTRSQSPTLEVSRFGPDFKES-----SSKDPSHNEFQYSSQISYMPKELHGI 553
Query: 162 SASRSV---FPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSP 218
S+ + P TVS + K+ E + + + + +P ++N SV D R S
Sbjct: 554 FPSKQLSVPLPSDTVSINTGTDHVLKVSE-TLQIHMKTPWA-APSLMANKSVLD-HRSSS 610
Query: 219 TPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQS 278
+P T VTTDLGLG L T+ +P P +D + Q LS S +G+ N ++
Sbjct: 611 SP-TRVTTDLGLGTL---YTSTAQDPDTPKLQDQRKHLQRLSDSVSTDCDGTNENTSHRT 666
Query: 279 SSSSCP--DLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
+ SSC +L +FDL+++K+L R L EK+ WQD+AI ISQT++ ++G G+ R
Sbjct: 667 ARSSCSGSNLEGKFDLADFKSLNRLLNEKVGWQDQAIRAISQTLSLCKSGAGKRRGSHGR 726
Query: 337 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 396
DIW F GPD GKRKIA ALAE I+G E+ I DL QDG F +Q
Sbjct: 727 ADIWLAFLGPDRLGKRKIASALAETIFGNPESLISVDLGFQDGFYPLNSVFEYQKSRCYD 786
Query: 397 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 456
V R KT+ DY+A EL KKP SVV+LENVDKADV VQNSL +A++TGK S+GR +S++
Sbjct: 787 V-LRRKTILDYIAGELSKKPHSVVFLENVDKADVLVQNSLLQALRTGKFSYSHGRAISIN 845
Query: 457 NAIFVTASSFVE--DARILP-SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
N IFV S+ + D+ +L S+M FSEE++ AK Q+LI A ++++
Sbjct: 846 NTIFVVTSTVCKGNDSFVLEESKM----FSEERMLEAKRCQMQLLIGRA---SEDAKRIG 898
Query: 514 ASETS----EGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDE 569
+ +G S LNKRK +D+ ++ TS+M K+ + LDLN+P EE E
Sbjct: 899 GTNVKVVPRKGFSKSSSLNKRKQADISDS-KEGATSKMQKQDSEASRSFLDLNMPVEEGE 957
Query: 570 VLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVG 629
V D+D + S SENT +WL DFF+Q + V FK FNF+ LAE++LK I F++T G
Sbjct: 958 EGVNDNDHESES-MSENTDAWLSDFFDQIDEKVVFKPFNFNELAEQVLKRIGMLFQRTFG 1016
Query: 630 SECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVAC 689
SE LEID +V+ +LAAA+LS+ +EDW+E VL +GF++AQ+KY+ A +VKLV C
Sbjct: 1017 SELQLEIDHEVIAYILAAAWLSDKKNAVEDWIEHVLGKGFVEAQQKYHPAAQYVVKLVNC 1076
Query: 690 EGHFLEELTPGVCLPPKLVLN 710
E F+EE P VCLP ++ ++
Sbjct: 1077 ESIFVEEQAPDVCLPARINMD 1097
>gi|224059278|ref|XP_002299803.1| predicted protein [Populus trichocarpa]
gi|222847061|gb|EEE84608.1| predicted protein [Populus trichocarpa]
Length = 1025
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 272/712 (38%), Positives = 380/712 (53%), Gaps = 95/712 (13%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
+ SFVPFGGFF TPS+FK P + Q++ C C+ K E+++ A K G T S+ADQ
Sbjct: 406 LGSFVPFGGFFSTPSDFKKPTNSINQSIICCHLCNAKYEKDVAAILKMGSTTSVADQSSE 465
Query: 61 VLPSWLQMAEPDSNKALDLKTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFPT 117
LPS LQMAE D+ KA+D +D AL +KI KW+DICQ LH Q
Sbjct: 466 KLPSLLQMAELDTGKAVDAVKVDDDTALNAKILGLRNKWNDICQRLHHAQPF-------- 517
Query: 118 VVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAK 177
F+F + S +++ S+ G S +DSE + G+K
Sbjct: 518 ---FKF--------DVSQATSQVSIAEG----FQSKHCVDSETEDVNH---------GSK 553
Query: 178 NDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGS 237
+ +L++K + +PC LSN S+ R S + VTSVTT LGLG L S
Sbjct: 554 QLEEVPRLKQKEKESPW-----FTPCPLSNVSLP-SDRTSSSSVTSVTTHLGLGTLYATS 607
Query: 238 APTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKT 297
A N K +D E Q SG SA ++K+
Sbjct: 608 AQEHNITK---LRDPMEHLQHFSGSGSA---------------------------EDFKS 637
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 357
+ RA++EK+ WQD A I + +++ + GH HHG++ + DI F GPD GK+KIA A
Sbjct: 638 VMRAISEKVGWQDRATYAIGEAVSRCKAGHGRHHGSNSKGDISFILLGPDRIGKKKIASA 697
Query: 358 LAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
LAE+++G ++FI DL D ++ F Q + D R T D +A +L KKP
Sbjct: 698 LAEVMFGSTQSFISLDLGSHDKVSSSNSIFDSQELQYDDELGRSMTFVDRIASKLSKKPH 757
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM 477
S+++LEN+DKAD VQ+SLS A++TG+ PDS GREVS +N IFV S+ + SE
Sbjct: 758 SLIFLENIDKADPLVQHSLSYALRTGRFPDSRGREVSTNNTIFVATSTIIVGNTNFLSEN 817
Query: 478 KDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRND 537
K KFSEE I AKS QIL+E A+E + S K+ R++
Sbjct: 818 KSIKFSEEMILGAKSWQMQILVE------------HAAEATSKRSEMKVRISREI----- 860
Query: 538 NPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQ 597
TS K+AH++ LDLNLP E+ D D +S SE++++WL+DF +Q
Sbjct: 861 ------TSASSKQAHKALRSYLDLNLPVEDTGECANYGDTDSDS-ISESSQAWLEDFSDQ 913
Query: 598 RVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVI 657
+ V FK F+FD+LAEKI+K+I F+ G E LLEID +VM Q+LAAA+LSE R +
Sbjct: 914 VDEKVVFKTFDFDSLAEKIVKEIGKQFQMAFGYEILLEIDDEVMVQILAAAWLSEKERAM 973
Query: 658 EDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLVL 709
EDW+E+V+ RGF A+ K +A +VKLV C+G L+E PG+ LP ++ L
Sbjct: 974 EDWIEEVVGRGFRKAKLKSQFSAQCVVKLVTCKGLVLKEQAPGIRLPSRINL 1025
>gi|357490799|ref|XP_003615687.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
gi|355517022|gb|AES98645.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
Length = 1092
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 275/729 (37%), Positives = 411/729 (56%), Gaps = 47/729 (6%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPFGGFF TP E K+P+ + +RC +C+EK EQE+ + K A++A +
Sbjct: 390 MGSFVPFGGFFSTPPESKSPISSANASFTRCDKCNEKYEQEVADAFKVD-PATLASNYTT 448
Query: 61 VLPSWLQMAEPDSNKALDL-KTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFP 116
LP + ++ + D++ LD+ K E+ +L KI KKW+DICQ LH Q S P
Sbjct: 449 SLPWFKKVVDVDTHGGLDVAKVNEENTSLNDKILGFQKKWNDICQRLH-----QARSHVP 503
Query: 117 TVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASR--SVFPFHT-- 172
++ +F + N GSS ++S+N + +S +P + S+ S P HT
Sbjct: 504 SLEVLRF-----GSGFNEGSSKDSSLNELQRSSPFSYMPKELHGTFPSKHLSPTPVHTGR 558
Query: 173 VSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGL 232
VS + K+ E N D+ + +P ++N SV + KS + + VTTDLGLG
Sbjct: 559 VSVNVGTDRVPKVTETQQN-DMTTPW-LAPSRMANMSVLEN--KSSSSLIPVTTDLGLGT 614
Query: 233 LGIGSAPTSNEPKEPISKDLTERSQELSGCCSA---TVNGSISNQLAQSSSSSCPDLNCQ 289
L S P +++P +D + + SA VNG+ S+++A+SS + ++ +
Sbjct: 615 L-YTSTPIAHKPDTSEFQDKIKHFEHFPESTSADSVAVNGNTSHKIARSSFPAS-NMATK 672
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH---EDHHGASPRRDIWFNFTGP 346
FD ++K+L + L EK+ WQ++AI I++T++ ++G D HG R DIWF F GP
Sbjct: 673 FDSVDFKSLNKLLFEKVGWQNQAICDINRTLSLHKSGEGKSRDLHG---RADIWFAFLGP 729
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQ-FRGKTLA 405
D GK+KIA ALAE I+G E+ I DL QDG PP + F KT+
Sbjct: 730 DRIGKKKIASALAETIFGNTESIISLDLGFQDGLY--PPNSIFECQKSLCYDLFIRKTVV 787
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
DY+A EL K P SVV+LENVDKAD VQ+SL +AI+ GK PDS GRE+S++NAIF+ +S+
Sbjct: 788 DYIAGELSKNPHSVVFLENVDKADFLVQSSLLQAIRRGKFPDSRGREISINNAIFLLSST 847
Query: 466 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILI----EPALVNRSSSQKLSASETSEGM 521
V + ++ FSEE I AK Q+L+ E A + S++ K+ +G
Sbjct: 848 -VCKGNGSSALVEGNLFSEETILEAKRCQMQLLLGDTSEDAKRSFSTNVKIV---RRKGF 903
Query: 522 SHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNS 581
S +NKRK +D ++ S+M K+ + LDLN+P +E E + + ++D
Sbjct: 904 SKPSFMNKRKRADTSDF-KEGAASKMQKQVCETSMSCLDLNMPLDEGEEGMDEDNNDHER 962
Query: 582 D-SSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKV 640
D EN+ SW DF ++ + V FK F+FDALAE++LK I+ F K GSE LE++ +V
Sbjct: 963 DFVVENSDSWFSDFCDKMDEKVVFKPFDFDALAEQLLKSISIQFEKAFGSEFQLEVNYEV 1022
Query: 641 MEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPG 700
M Q+LAAA+L++ +++W+E VL +GF +AQ+KY+ +VKLV CE F+EE G
Sbjct: 1023 MAQILAAAWLADKKDAVDNWVESVLGKGFFEAQQKYHPVTKYVVKLVNCESIFVEEPDLG 1082
Query: 701 VCLPPKLVL 709
VCLP + L
Sbjct: 1083 VCLPASINL 1091
>gi|449472677|ref|XP_004153665.1| PREDICTED: uncharacterized protein LOC101204506 [Cucumis sativus]
Length = 1094
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 265/725 (36%), Positives = 393/725 (54%), Gaps = 39/725 (5%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPFGGFFP+ S F + L Q+ +RC QC++K EQE+ A K G + + +S
Sbjct: 394 MGSFVPFGGFFPSQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSES 453
Query: 61 VLPSWLQMAEPDSN-KALDL-KTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQF 115
L + E D+ K D+ KT++D A+ K+ KKW+DIC+ LH+ Q
Sbjct: 454 SL--HMSPTEIDAKCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDIS 510
Query: 116 PTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSG 175
T+ G F + + +SV G +V + + D +N ++ +S
Sbjct: 511 HTMHGVSFESPRFALDHERSGEEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEISD 570
Query: 176 AKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKS----PTPVTSVTTDLGLG 231
+ D+ S + +S G + S S V G S P+ SVTTDLGLG
Sbjct: 571 SHTDNFQSNIVSGAS-----PGEAESLRIFSKPVVPKGHLHSDKPLPSSFISVTTDLGLG 625
Query: 232 LLGIGSAPTSNEPKEPISKDLTERS---QELSGCCSATVNGSISNQLAQSSSSSCPDLNC 288
L ++ E K I DL + Q L+G + +N QSS S
Sbjct: 626 TL----YASAGENKRKIV-DLESQKVSIQHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQ 680
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDL 348
D+ +K+L+ AL EK+ WQ +A S I +TI + RTG ++ R DIW F GPD+
Sbjct: 681 VLDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDM 740
Query: 349 CGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYV 408
GKRKI+ ALAE+++G +EN I D QD + + F Q + G +FRG+T+ DYV
Sbjct: 741 MGKRKISFALAELMFGSRENLISVDFGSQDRDRRHNSLFDCQGLNGYDERFRGQTVVDYV 800
Query: 409 AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA-SSFV 467
A EL KKP SVV LENVDKADV ++ LS+AI TGK DS+GR+ +++N IF+T + V
Sbjct: 801 AGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKV 860
Query: 468 EDARILPSEMKDCKFSEEKIYRAKSRLTQILIE--PALVNRSSSQKLSASETSEGMSHQK 525
+ L SE + +FSE++I A++ QI ++ + V++ + + + G S+
Sbjct: 861 KKTSNLDSE-EQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLS 919
Query: 526 LLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSE 585
+ KRKL DN + +E+ K+A S LDLNLP EE E + D D +S +SE
Sbjct: 920 IFKKRKL----DN----EFTEL-KKASSSSMSFLDLNLPLEEVEDESNEGDCDSDS-ASE 969
Query: 586 NTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLL 645
+++W+ +F Q + + FK +NFD AEK++K+IN FR+ GSE +LEID K++ Q+L
Sbjct: 970 GSEAWVDEFLEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGSEVVLEIDYKIIVQIL 1029
Query: 646 AAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPP 705
AA +LSE +E+WLE VL R F++A+ KY + S++KLV E +E+ G+ LP
Sbjct: 1030 AAKWLSEKKNAMEEWLELVLHRSFVEAEHKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPA 1089
Query: 706 KLVLN 710
K+ LN
Sbjct: 1090 KIKLN 1094
>gi|449455148|ref|XP_004145315.1| PREDICTED: uncharacterized protein LOC101203741 [Cucumis sativus]
Length = 1090
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 265/725 (36%), Positives = 393/725 (54%), Gaps = 39/725 (5%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPFGGFFP+ S F + L Q+ +RC QC++K EQE+ A K G + + +S
Sbjct: 390 MGSFVPFGGFFPSQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSES 449
Query: 61 VLPSWLQMAEPDSN-KALDL-KTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQF 115
L + E D+ K D+ KT++D A+ K+ KKW+DIC+ LH+ Q
Sbjct: 450 SL--HMSPTEIDAKCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDIS 506
Query: 116 PTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSG 175
T+ G F + + +SV G +V + + D +N ++ +S
Sbjct: 507 HTMHGVSFESPRFALDHERSGEEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEISD 566
Query: 176 AKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKS----PTPVTSVTTDLGLG 231
+ D+ S + +S G + S S V G S P+ SVTTDLGLG
Sbjct: 567 SHTDNFQSNIVSGAS-----PGEAESLRIFSKPVVPKGHLHSDKPLPSSFISVTTDLGLG 621
Query: 232 LLGIGSAPTSNEPKEPISKDLTERS---QELSGCCSATVNGSISNQLAQSSSSSCPDLNC 288
L ++ E K I DL + Q L+G + +N QSS S
Sbjct: 622 TL----YASAGENKRKIV-DLESQKVSIQHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQ 676
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDL 348
D+ +K+L+ AL EK+ WQ +A S I +TI + RTG ++ R DIW F GPD+
Sbjct: 677 VLDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDM 736
Query: 349 CGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYV 408
GKRKI+ ALAE+++G +EN I D QD + + F Q + G +FRG+T+ DYV
Sbjct: 737 MGKRKISFALAELMFGSRENLISVDFGSQDRDRRHNSLFDCQGLNGYDERFRGQTVVDYV 796
Query: 409 AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA-SSFV 467
A EL KKP SVV LENVDKADV ++ LS+AI TGK DS+GR+ +++N IF+T + V
Sbjct: 797 AGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKV 856
Query: 468 EDARILPSEMKDCKFSEEKIYRAKSRLTQILIE--PALVNRSSSQKLSASETSEGMSHQK 525
+ L SE + +FSE++I A++ QI ++ + V++ + + + G S+
Sbjct: 857 KKTSNLDSE-EQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLS 915
Query: 526 LLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSE 585
+ KRKL DN + +E+ K+A S LDLNLP EE E + D D +S +SE
Sbjct: 916 IFKKRKL----DN----EFTEL-KKASSSSMSFLDLNLPLEEVEDESNEGDCDSDS-ASE 965
Query: 586 NTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLL 645
+++W+ +F Q + + FK +NFD AEK++K+IN FR+ GSE +LEID K++ Q+L
Sbjct: 966 GSEAWVDEFLEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGSEVVLEIDYKIIVQIL 1025
Query: 646 AAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPP 705
AA +LSE +E+WLE VL R F++A+ KY + S++KLV E +E+ G+ LP
Sbjct: 1026 AAKWLSEKKNAMEEWLELVLHRSFVEAEHKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPA 1085
Query: 706 KLVLN 710
K+ LN
Sbjct: 1086 KIKLN 1090
>gi|356551867|ref|XP_003544294.1| PREDICTED: chaperone protein ClpB-like [Glycine max]
Length = 1075
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 277/738 (37%), Positives = 389/738 (52%), Gaps = 87/738 (11%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
M SFVPFGGFF TP E ++P+ +
Sbjct: 391 MGSFVPFGGFFSTP-EIRSPVDPSSSYSTSSH---------------------------- 421
Query: 61 VLPSWLQ-MAEPDSNKALDL---------KTKEDGLALRSKI---TKKWDDICQSLHRTQ 107
WLQ + D+++ D+ +T E+ +L KI KKW DICQ LH T
Sbjct: 422 ----WLQKVVNMDAHRGSDVAKKELHHPVQTNEENTSLNDKILGFQKKWSDICQRLHHTS 477
Query: 108 SL------QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENV 161
SL Q SQ PTV +F KE++N S + Y + S +P + ++
Sbjct: 478 SLPQFDISQTRSQAPTVEVLRFGLAFKESSNKDPSHSEFQ-----YSSQISCMPKELHSI 532
Query: 162 SASRSV---FPFHTV---SGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSR 215
S+ + P TV +G + +S+ + N +P ++N S D
Sbjct: 533 FPSKQLSVPLPSDTVCINTGTDHVPKVSETLQIHMNTPW-----VAPSLMANKSALD--H 585
Query: 216 KSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQL 275
+S + T VTTDLGLG L T+ +P P +D + Q LS S +G N
Sbjct: 586 RSSSFRTPVTTDLGLGTL---YTSTAQDPDTPKLQDQRKHLQHLSDSVSTDCDGMNENTS 642
Query: 276 AQSSSSSCP--DLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
+ + SC +L +FDL+++K+L R LTEK+ WQD+AI ISQT++ ++G G+
Sbjct: 643 HRIARFSCSGSNLEGKFDLADFKSLDRLLTEKVGWQDQAICAISQTLSLCKSGAGKRRGS 702
Query: 334 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 393
+ R DIW F GPD GKRKIA LAE I+G E+ I DL QD F +Q
Sbjct: 703 NGRADIWLAFLGPDRLGKRKIASVLAETIFGNPESLISVDLGFQDSFYPLNSVFEYQKSR 762
Query: 394 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 453
V R KT+ DY+A EL KKP SVV+LENVDKADV VQNSL +A++TGK S+GR +
Sbjct: 763 CYDV-LRRKTILDYIAGELSKKPHSVVFLENVDKADVLVQNSLLQAVRTGKFSYSHGRVI 821
Query: 454 SVSNAIFVTASSFVE-DARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL--VNRSSSQ 510
S++N IF+ S+ + + + E K FSEE+I AK Q+L+ A R S
Sbjct: 822 SINNTIFLVTSTVCKGNGSFVLEESK--MFSEERILEAKRCQMQLLLGHASEDAGRIGST 879
Query: 511 KLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV 570
+ +G S LNKRK +D+ ++ TS+M K+ + LDLN+P E+ E
Sbjct: 880 NVKVV-PGKGFSKSSSLNKRKQADISDS-KEGATSKMQKQDSEASRSYLDLNMPVEDGEE 937
Query: 571 LVLDSDDDRNSDS-SENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVG 629
V +DD S+S +ENT +WL DFF+Q + V FK+FNFD LAE++LK I F++T G
Sbjct: 938 GV---NDDHESESITENTDAWLSDFFDQIDEKVVFKSFNFDELAEEVLKRIGMLFQRTFG 994
Query: 630 SECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVAC 689
SE LEID +V+ +LAAA+LS+ +EDW+E VL +GF++AQ+KY A +VKLV C
Sbjct: 995 SELQLEIDYEVITHILAAAWLSDKKNAVEDWVEHVLGKGFVEAQQKYLPAAQYVVKLVNC 1054
Query: 690 EGHFLEELTPGVCLPPKL 707
E F+EE P VCLP ++
Sbjct: 1055 ESIFVEEQAPDVCLPARI 1072
>gi|255592933|ref|XP_002535750.1| conserved hypothetical protein [Ricinus communis]
gi|223522072|gb|EEF26633.1| conserved hypothetical protein [Ricinus communis]
Length = 596
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 248/607 (40%), Positives = 357/607 (58%), Gaps = 28/607 (4%)
Query: 112 GSQFPTVVGFQFLQ---DKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVF 168
GS + G+ L D+KEN+++S S +++ N N G+ I S+
Sbjct: 9 GSGMISASGYIMLSLSLDRKENSSSS-CSRDSTFNESQCANFGLGVNI------PSKHSI 61
Query: 169 PFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
P S A N S SKL + + GG P + + R S + VTSVTTDL
Sbjct: 62 PIPVSSEAGNVSFQSKLLGQQK----EKGGPWFPPIILPITNLPADRTSSSSVTSVTTDL 117
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSAT--VNGSISNQLAQSSSSSCPDL 286
GLG + A +S EP P D E Q SG S+ V+ S S Q+ SS S P
Sbjct: 118 GLGTI---YASSSREPITPKLCDHREYLQRFSGFKSSEFEVSESTSYQIIPSSRFSNPSS 174
Query: 287 NCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGP 346
FD + K++ +ALTEK+ WQ+EAI I++ I++ + G+ G++ R +IW F GP
Sbjct: 175 GGHFDYRDCKSITKALTEKVGWQEEAICAITRAISRCKAGYGRSCGSTARGNIWLTFLGP 234
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
D GK++IA LAEI++G E+ I DL DG F Q V+FRGKT+ D
Sbjct: 235 DKVGKKRIASMLAEIMFGSHEHLISVDLRFHDGSSQLNSVFECQESNDYDVKFRGKTVVD 294
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASS 465
Y++ EL K+P SVV LENVDKAD+ VQNSLS+A++TGK DS+GRE+ ++N IFV T++S
Sbjct: 295 YISMELGKRPHSVVLLENVDKADLLVQNSLSQAVRTGKFADSHGREIGINNMIFVMTSTS 354
Query: 466 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQK 525
V + LP ++ KFSEE+I AKS ++LI+ A + +++ + S
Sbjct: 355 AVGNKSHLPQKVT-IKFSEERILGAKSWQMKMLIKHAAEGSNRGSEMTMKFSRLVTSTAS 413
Query: 526 LLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRN--SDS 583
+NKRKL G +D +Q ++E K+AH+ +LDLNLP EE E +++D + SDS
Sbjct: 414 PVNKRKLDGASDTAEQDFSNEAKKQAHKLFGPSLDLNLPVEETE----ENNDSGSCGSDS 469
Query: 584 -SENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVME 642
SEN+++WL DF +Q + V FK FNFD LAEKI+++I+ F K G+E LEID +VM
Sbjct: 470 ISENSQAWLDDFLDQVDEKVVFKPFNFDGLAEKIVREISTHFHKAFGTEVPLEIDDEVMV 529
Query: 643 QLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVC 702
Q+LAA++LS+ +R +EDW+E+V+ RGF++A++KY + IVKLVAC +EE PG+C
Sbjct: 530 QILAASWLSDRSRAVEDWVEEVVGRGFMEARQKYGINVQYIVKLVACTSLLVEERAPGIC 589
Query: 703 LPPKLVL 709
LP ++ L
Sbjct: 590 LPARINL 596
>gi|449519683|ref|XP_004166864.1| PREDICTED: uncharacterized protein LOC101231048, partial [Cucumis
sativus]
Length = 702
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 257/722 (35%), Positives = 384/722 (53%), Gaps = 39/722 (5%)
Query: 4 FVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLP 63
F FP+ S F + L Q+ +RC QC++K EQE+ A K G + + +S L
Sbjct: 5 FCSIWWIFPSQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLH 64
Query: 64 SWLQMAEPDSN-KALDL-KTKEDGLALRSKIT---KKWDDICQSLHRTQSLQVGSQFPTV 118
+ E D+ K D+ KT++D A+ K+ KKW+DIC+ LH+ Q T+
Sbjct: 65 --MSPTEIDAKCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTM 121
Query: 119 VGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKN 178
G F + + +SV G +V + + D +N ++ +S +
Sbjct: 122 HGVSFESPRFALDHERSGEEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHT 181
Query: 179 DSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKS----PTPVTSVTTDLGLGLLG 234
D+ S + +S G + S S V G S P+ SVTTDLGLG L
Sbjct: 182 DNFQSNIVSGAS-----PGEAESLRIFSKPVVPKGHLHSDKPLPSSFISVTTDLGLGTL- 235
Query: 235 IGSAPTSNEPKEPISKDLTERS---QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFD 291
++ E K I DL + Q L+G + +N QSS S D
Sbjct: 236 ---YASAGENKRKIV-DLESQKVSIQHLTGSNKTEYSRPSNNNPGQSSGFSDLSAGQVLD 291
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGK 351
+ +K+L+ AL EK+ WQ +A S I +TI + RTG ++ R DIW F GPD+ GK
Sbjct: 292 IREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGK 351
Query: 352 RKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWE 411
RKI+ ALAE++ G +EN I D QD + + F Q + G +FRG+T+ DYVA E
Sbjct: 352 RKISFALAELMVGSRENLISVDFGSQDRDQRHNSLFDCQGLNGYDERFRGQTVVDYVAGE 411
Query: 412 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA-SSFVEDA 470
L KKP SVV LENVDKADV ++ LS+AI TGK DS+GR+ +++N IF+T + V+
Sbjct: 412 LRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKVKKT 471
Query: 471 RILPSEMKDCKFSEEKIYRAKSRLTQILIE--PALVNRSSSQKLSASETSEGMSHQKLLN 528
L SE + +FSE++I A++ QI ++ + V++ + + + G S+ +
Sbjct: 472 SNLDSE-EQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFK 530
Query: 529 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 588
KRKL DN + +E+ K+A S LDLNLP EE E + D D +S +SE ++
Sbjct: 531 KRKL----DN----EFTEL-KKASSSSMSFLDLNLPLEEVEDESNEGDCDSDS-ASEGSE 580
Query: 589 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 648
+W+ +F Q + + FK +NFD AEK++K+IN FR+ GSE +LEID K++ Q+LAA
Sbjct: 581 AWVDEFLEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGSEVVLEIDYKIIVQILAAK 640
Query: 649 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKLV 708
+LSE +E+WLE VL R F++A+ KY + S++KLV E +E+ G+ LP K+
Sbjct: 641 WLSEKKNAMEEWLELVLHRSFVEAEHKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIK 700
Query: 709 LN 710
LN
Sbjct: 701 LN 702
>gi|297736601|emb|CBI25472.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 206/390 (52%), Positives = 245/390 (62%), Gaps = 19/390 (4%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQS 60
MESFVP GGFF +P E K L G Q SRC QC+EKCEQE+ A SKGGFTAS+ADQ Q
Sbjct: 368 MESFVPLGGFFSSPCELKGQLSGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQP 427
Query: 61 VLPSWLQMAEPDSNKALDL-KTKEDG-LALRSKIT---KKWDDICQSLHRTQSL------ 109
LP+WLQMAE + A D+ K K+DG L L +KI KKWD+ICQ L TQ
Sbjct: 428 NLPAWLQMAELGKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADFY 487
Query: 110 QVGSQFPTVVGFQFLQDKKENANNSGSS-TNASVNGGSYVNVYSGIPIDSENVSASRSVF 168
+VGSQ P+VVGFQ ++D KENA+N SS TNAS + + S + +D + V S
Sbjct: 488 RVGSQVPSVVGFQAVKDSKENADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPST 547
Query: 169 PFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
P VS KN+S LSKL EKSS + GS LS SSV DG R SPT V SVTTDL
Sbjct: 548 PLPLVS--KNESFLSKLFEKSSKTEEHEPGSLQSRTLSTSSVGDG-RTSPTSVNSVTTDL 604
Query: 229 GLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNC 288
GLGL P S + K+ + + S A V+ + SSS SCPD
Sbjct: 605 GLGLF----YPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWG 660
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDL 348
Q D ++KTLFRALTE+IDWQ EAISVIS+TIA R G+E HGASP+ DIWFNF GPD
Sbjct: 661 QSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDR 720
Query: 349 CGKRKIAIALAEIIYGGKENFICADLCPQD 378
K+KIA+ALAEI+YG +E+FIC DL QD
Sbjct: 721 FSKKKIAVALAEILYGRRESFICVDLSSQD 750
>gi|218186254|gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indica Group]
Length = 1129
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 249/763 (32%), Positives = 373/763 (48%), Gaps = 83/763 (10%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASIADQCQ 59
M+SFVPFGGF E + C RCQQC++K EQE+ S G TA D Q
Sbjct: 396 MDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE--DHHQ 453
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHR-TQSLQV 111
LPS LQ M P N D +K ++D + L SKI KKW++ C LH+ Q +
Sbjct: 454 GGLPSLLQNGSMMGP--NNGFDPVKVRDDRMVLNSKILNLRKKWNEYCLRLHQDCQRINR 511
Query: 112 G--SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFP 169
FP +G DK+ +AN S S + V +V + + + S++
Sbjct: 512 DPYKPFPRYIGVP--ADKERSANPSKGSESIGVQK----DVIKPCAVSAVHSSSTARPIS 565
Query: 170 FHTVSGAKNDSLLSKLREKSSNAD--LDSGGSRSP-CCLSNSSVDDGSRKSPTPVTSVTT 226
+V+ +N+ L+ L+ + S +D L G +S LSN+ D SP+ V T
Sbjct: 566 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPD-DHASPSSAAPVET 624
Query: 227 DLGLGL-----------LGIGSAPTSNEPKEPISK---DLTERSQELS----GCCSATVN 268
DL LG S + K DL + +LS C +++N
Sbjct: 625 DLVLGTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN 684
Query: 269 -GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
G S+ S +S P DLSN+K L L + + Q+EA+S I
Sbjct: 685 VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAMSAI 744
Query: 317 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 376
++I + R+ E G S R DIW F G D K++IA+ALAE+++G KEN I DL
Sbjct: 745 CESIVRCRST-ESRRGPS-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDLNL 802
Query: 377 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 436
QD D FRGKT D + +L KK SV++L+N+D+AD VQ+SL
Sbjct: 803 QDW---------------DDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSL 847
Query: 437 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQ 496
S AI++G+ D G+ V ++++I V + S + ++ E FSEEKI + +
Sbjct: 848 SDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHGSKNGLEE--GLSFSEEKILATRGHRLK 905
Query: 497 ILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDTSEMVK 549
IL+EP A+ + S K+ S Q L +KRKL +D + ++ +K
Sbjct: 906 ILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLK 965
Query: 550 RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNF 609
R HR+ + DLNLP +EDE L D D + +S NT+ + + + FK F+F
Sbjct: 966 RLHRTSSIPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKSIDALLHSVDGSINFKPFDF 1025
Query: 610 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
D LA+ +L++ + RK +G+EC+LEID MEQ+LAAA+ SE ++ WLE+V R
Sbjct: 1026 DKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARSL 1085
Query: 670 LDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 710
+ + KY ++S ++LV CE ++ GV LPP+++L+
Sbjct: 1086 DELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILD 1128
>gi|14532596|gb|AAK64026.1| unknown protein [Arabidopsis thaliana]
Length = 1002
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 347/715 (48%), Gaps = 125/715 (17%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGG-LCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQ 59
M SFVPFGGFF + S+F+ P + Q + RC C+EK EQE+ A +K G + I DQC
Sbjct: 389 MGSFVPFGGFFSSTSDFRIPSSSSMNQTLPRCHLCNEKYEQEVTAFAKSG--SMIDDQCS 446
Query: 60 SVLPSWLQMAEPDSNKALDLKTKEDGLALRSKI---TKKWDDICQSLHRTQSLQVGSQFP 116
LPSWL+ E + K K K+D L S+I KKWDDICQ +H+T P
Sbjct: 447 EKLPSWLRNVEHEHEKGNLGKVKDDPNVLASRIPALQKKWDDICQRIHQT---------P 497
Query: 117 TVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGA 176
F + + GSS+ ++ GS +E + +R+ F +
Sbjct: 498 AFPKLSFQPVRPQFPLQLGSSSQTKMSLGS----------PTEKIVCTRTSESFQGMVAL 547
Query: 177 KND-----SLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLG 231
+ L K+ + DL S + SP VTTDLGLG
Sbjct: 548 PQNPPHQPGLSVKISKPKHTEDLSSSTTNSPLSF------------------VTTDLGLG 589
Query: 232 LLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFD 291
+ A + EP P+S + R E+ I + S+S C D
Sbjct: 590 TI---YASKNQEPSTPVS--VERRDFEV-----------IKEKQLLSASRYCKD------ 627
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRR--TGHEDHHGASPRRDIWFNFTGPDLC 349
+K+L L+ K+ +Q+EA++ IS+ + R + ++H A+ ++W GPD
Sbjct: 628 ---FKSLRELLSRKVGFQNEAVNAISEIVCGYRDESRRRNNHVAT-TSNVWLALLGPDKA 683
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK+K+A+ALAE+ GG++NFIC D QD + +FRGKT+ DY+A
Sbjct: 684 GKKKVALALAEVFCGGQDNFICVDFKSQDSLDD---------------RFRGKTVVDYIA 728
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
E+ ++ SVV++ENV+KA+ Q LS+A++TGKL DS+GRE+S+ N I V S +
Sbjct: 729 GEVARRAGSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGREISMKNVIVVATISGSDK 788
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRLTQI-LIEPALVNRSSSQKLSASETSEGMSHQKLLN 528
A + K+SEE++ AK+ QI L + + VN++
Sbjct: 789 ASDCHVLEEPVKYSEERVLNAKNWTLQIKLADTSNVNKN--------------------- 827
Query: 529 KRKLIGRNDNPQQHDTSEMVK-RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENT 587
G N Q+ +E+ + RA +S LDLNLP +E +++++D SENT
Sbjct: 828 -----GPNKRRQEEAETEVTELRALKSQRSFLDLNLPVDE-----IEANEDEAYTMSENT 877
Query: 588 KSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAA 647
++WL+DF Q V FK +FD LA+ I ++I + F + G E LEI+ V+ ++LAA
Sbjct: 878 EAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNILSLFHLSFGPETHLEIENDVILKILAA 937
Query: 648 A-YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGV 701
+ S+ + + WL+ VL F A++K A VKLVA EE T G+
Sbjct: 938 LRWSSDEEKTFDQWLQTVLAPSFAKARQKCVPAAPFSVKLVASRESPAEEETTGI 992
>gi|18402202|ref|NP_565689.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
gi|3420054|gb|AAC31855.1| expressed protein [Arabidopsis thaliana]
gi|330253235|gb|AEC08329.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
Length = 1002
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 347/715 (48%), Gaps = 125/715 (17%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGG-LCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQ 59
M SFVPFGGFF + S+F+ P + Q + RC C+EK EQE+ A +K G + I DQC
Sbjct: 389 MGSFVPFGGFFSSTSDFRIPSSSSMNQTLPRCHLCNEKYEQEVTAFAKSG--SMIDDQCS 446
Query: 60 SVLPSWLQMAEPDSNKALDLKTKEDGLALRSKI---TKKWDDICQSLHRTQSLQVGSQFP 116
LPSWL+ E + K K K+D L S+I KKWDDICQ +H+T P
Sbjct: 447 EKLPSWLRNVEHEHEKGNLGKVKDDPNVLASRIPALQKKWDDICQRIHQT---------P 497
Query: 117 TVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGA 176
F + + GSS+ ++ GS +E + +R+ F +
Sbjct: 498 AFPKLSFQPVRPQFPLQLGSSSQTKMSLGS----------PTEKIVCTRTSESFQGMVAL 547
Query: 177 KND-----SLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLG 231
+ L K+ + DL S + SP VTTDLGLG
Sbjct: 548 PQNPPHQPGLSVKISKPKHTEDLSSSTTNSPLSF------------------VTTDLGLG 589
Query: 232 LLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFD 291
+ A + EP P+S + R E+ I + S+S C D
Sbjct: 590 TI---YASKNQEPSTPVS--VERRDFEV-----------IKEKQLLSASRYCKD------ 627
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRR--TGHEDHHGASPRRDIWFNFTGPDLC 349
+K+L L+ K+ +Q+EA++ IS+ + R + ++H A+ ++W GPD
Sbjct: 628 ---FKSLRELLSRKVGFQNEAVNAISEIVCGYRDESRRRNNHVAT-TSNVWLALLGPDKA 683
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK+K+A+ALAE+ GG++NFIC D QD + +FRGKT+ DY+A
Sbjct: 684 GKKKVALALAEVFCGGQDNFICVDFKSQDSLDD---------------RFRGKTVVDYIA 728
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
E+ ++ SVV++ENV+KA+ Q LS+A++TGKL DS+GRE+S+ N I V S +
Sbjct: 729 GEVARRADSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGREISMKNVIVVATISGSDK 788
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRLTQI-LIEPALVNRSSSQKLSASETSEGMSHQKLLN 528
A + K+SEE++ AK+ QI L + + VN++
Sbjct: 789 ASDCHVLEEPVKYSEERVLNAKNWTLQIKLADTSNVNKN--------------------- 827
Query: 529 KRKLIGRNDNPQQHDTSEMVK-RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENT 587
G N Q+ +E+ + RA +S LDLNLP +E +++++D SENT
Sbjct: 828 -----GPNKRRQEEAETEVTELRALKSQRSFLDLNLPVDE-----IEANEDEAYTMSENT 877
Query: 588 KSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAA 647
++WL+DF Q V FK +FD LA+ I ++I + F + G E LEI+ V+ ++LAA
Sbjct: 878 EAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNILSLFHLSFGPETHLEIENDVILKILAA 937
Query: 648 A-YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGV 701
+ S+ + + WL+ VL F A++K A VKLVA EE T G+
Sbjct: 938 LRWSSDEEKTFDQWLQTVLAPSFAKARQKCVPAAPFSVKLVASRESPAEEETTGI 992
>gi|125578208|gb|EAZ19354.1| hypothetical protein OsJ_34905 [Oryza sativa Japonica Group]
Length = 892
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 245/763 (32%), Positives = 369/763 (48%), Gaps = 83/763 (10%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASIADQCQ 59
M+SFVPFGGF E + C RCQQC++K EQE+ S G TA D Q
Sbjct: 159 MDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE--DHHQ 216
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-TQSLQV 111
LPS LQ M P N D +K ++D + L SKI KKW++ C LH+ Q +
Sbjct: 217 GGLPSLLQNGSMMGP--NNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDCQRINR 274
Query: 112 G--SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFP 169
FP +G DK+ +AN S S + V +V + + + S++
Sbjct: 275 DPYKPFPRYIGVP--ADKERSANPSKGSESIGVQK----DVIKPCAVSAVHSSSTARPIS 328
Query: 170 FHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTT 226
+V+ +N+ L+ L+ + S +D + G LSN+ D SP+ V T
Sbjct: 329 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPD-DHASPSSAAPVET 387
Query: 227 DLGL-----------GLLGIGSAPTSNEPKEPISK---DLTERSQELS----GCCSATVN 268
DL L S + K DL + +LS C +++N
Sbjct: 388 DLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN 447
Query: 269 -GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
G S+ S +S P DLSN+K L L + + Q+EA+S I
Sbjct: 448 VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAVSAI 507
Query: 317 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 376
++I + R+ E G S R DIW F G D K++IA+ALAE+++G KEN I DL
Sbjct: 508 CESIVRCRST-ESRRGPS-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDLNL 565
Query: 377 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 436
QD D FRGKT D + +L KK SV++L+N+D+AD VQ+SL
Sbjct: 566 QDW---------------DDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSL 610
Query: 437 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQ 496
S AI++G+ D G+ V ++++I V + S + ++ E FSEEKI + +
Sbjct: 611 SDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHGSKNGLEE--GLSFSEEKILATRGHRLK 668
Query: 497 ILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDTSEMVK 549
IL+EP A+ + S K+ S Q L +KRKL +D + ++ +K
Sbjct: 669 ILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLK 728
Query: 550 RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNF 609
R HR+ + DLNLP +EDE D D + +S NT+ + + + FK F+F
Sbjct: 729 RLHRTSSIPFDLNLPVDEDEPFDADDDSSSHENSYGNTEKSIDALLHSVDGSINFKPFDF 788
Query: 610 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
D LA+ +L++ + RK +G+EC+LEID MEQ+LAAA+ SE ++ WLE+V R
Sbjct: 789 DKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARSL 848
Query: 670 LDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 710
+ + KY ++S ++LV CE ++ GV LPP+++L+
Sbjct: 849 DELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILD 891
>gi|115486876|ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group]
gi|108862072|gb|ABA95594.2| expressed protein [Oryza sativa Japonica Group]
gi|113648432|dbj|BAF28944.1| Os12g0104300 [Oryza sativa Japonica Group]
Length = 1129
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 245/763 (32%), Positives = 369/763 (48%), Gaps = 83/763 (10%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASIADQCQ 59
M+SFVPFGGF E + C RCQQC++K EQE+ S G TA D Q
Sbjct: 396 MDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE--DHHQ 453
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHR-TQSLQV 111
LPS LQ M P N D +K ++D + L SKI KKW++ C LH+ Q +
Sbjct: 454 GGLPSLLQNGSMMGP--NNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDCQRINR 511
Query: 112 G--SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFP 169
FP +G DK+ +AN S S + V +V + + + S++
Sbjct: 512 DPYKPFPRYIGVP--ADKERSANPSKGSESIGVQK----DVIKPCAVSAVHSSSTARPIS 565
Query: 170 FHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTT 226
+V+ +N+ L+ L+ + S +D + G LSN+ D SP+ V T
Sbjct: 566 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPD-DHASPSSAAPVET 624
Query: 227 DLGL-----------GLLGIGSAPTSNEPKEPISK---DLTERSQELS----GCCSATVN 268
DL L S + K DL + +LS C +++N
Sbjct: 625 DLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN 684
Query: 269 -GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
G S+ S +S P DLSN+K L L + + Q+EA+S I
Sbjct: 685 VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAVSAI 744
Query: 317 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 376
++I + R+ E G S R DIW F G D K++IA+ALAE+++G KEN I DL
Sbjct: 745 CESIVRCRST-ESRRGPS-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDLNL 802
Query: 377 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 436
QD D FRGKT D + +L KK SV++L+N+D+AD VQ+SL
Sbjct: 803 QDW---------------DDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSL 847
Query: 437 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQ 496
S AI++G+ D G+ V ++++I V + S + ++ E FSEEKI + +
Sbjct: 848 SDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHGSKNGLEE--GLSFSEEKILATRGHRLK 905
Query: 497 ILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDTSEMVK 549
IL+EP A+ + S K+ S Q L +KRKL +D + ++ +K
Sbjct: 906 ILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLK 965
Query: 550 RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNF 609
R HR+ + DLNLP +EDE D D + +S NT+ + + + FK F+F
Sbjct: 966 RLHRTSSIPFDLNLPVDEDEPFDADDDSSSHENSYGNTEKSIDALLHSVDGSINFKPFDF 1025
Query: 610 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
D LA+ +L++ + RK +G+EC+LEID MEQ+LAAA+ SE ++ WLE+V R
Sbjct: 1026 DKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARSL 1085
Query: 670 LDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 710
+ + KY ++S ++LV CE ++ GV LPP+++L+
Sbjct: 1086 DELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILD 1128
>gi|297822717|ref|XP_002879241.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
gi|297325080|gb|EFH55500.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
Length = 1007
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 227/712 (31%), Positives = 342/712 (48%), Gaps = 120/712 (16%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGG-LCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQ 59
M SFVPFGGFF + S+F+ P + Q++ RC C+EK EQE+ A +K G +S+ DQC
Sbjct: 395 MGSFVPFGGFFSSTSDFRVPFSNSMNQSLPRCHLCNEKYEQEVTAFAKSG--SSLDDQCS 452
Query: 60 SVLPSWLQMAEPDSNKALDLKTKEDGLALRSKI---TKKWDDICQSLHRTQSLQVGSQFP 116
LPSWL+ E + +K K K+D L S+I KKWDDICQ +H+T + S P
Sbjct: 453 EKLPSWLRNVEHEQDKGSLGKVKDDPNVLVSRIPALQKKWDDICQRIHQTPAFPKLSFQP 512
Query: 117 TVVGFQF-LQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSG 175
F L ++ + GSST SV + G ++ P H
Sbjct: 513 VRPQFPLQLVSSSQSKMSLGSSTEQSVRSIRTSESFQG---------TAQVQNPPH---- 559
Query: 176 AKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGI 235
L K+ + + DL SR + +P++ VTTDLGLG +
Sbjct: 560 --QPGLSLKISKPTHTEDL------------------TSRTTNSPLSCVTTDLGLGTIYA 599
Query: 236 GSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNW 295
SN P KD I + + + C D +
Sbjct: 600 SKNQDSNTPVSLERKDFE----------------VIKEKQSLVAPRYCKD---------F 634
Query: 296 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 355
K+L L+ K+ +Q+EA++ IS+ + R + + ++W GPD GK+K+A
Sbjct: 635 KSLRELLSRKVGFQNEAVNAISEIVCGYRDESRRRNNIATTSNVWLALLGPDKAGKKKVA 694
Query: 356 IALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
ALA++ G++NFIC D QD + +FRGKT+ DY+A E+ +
Sbjct: 695 SALADVFCSGQDNFICVDFKSQDNLDD---------------RFRGKTVVDYIASEVATR 739
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVE---DARI 472
SVV++ENV+KA+ Q LS A++TGKL DS+GRE+S+ N I V S + D +
Sbjct: 740 ADSVVFIENVEKAEFPDQIRLSDAMRTGKLRDSHGREISMKNVIVVATISGSDKDSDCHV 799
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQI-LIEPALVNRSSSQKLSASETSEGMSHQKLLNKRK 531
L + K+SEE++ AK+ QI L + + VN++ LNKR+
Sbjct: 800 LEEPV---KYSEERVLSAKNWKLQIKLADTSNVNKNG------------------LNKRR 838
Query: 532 LIGRNDNPQQHDTSEMVK-RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSW 590
Q+ +EM + RA +S LDLNLP +E +++++D SENT++W
Sbjct: 839 --------QEEAETEMTELRALKSQRSFLDLNLPVDE-----IEANEDEAYTMSENTEAW 885
Query: 591 LQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA-Y 649
L+DF Q V FK +FD LA+ I ++I + F ++ G E LEI+ + ++L A +
Sbjct: 886 LEDFVEQVDGKVTFKLIDFDELAKNIKRNIISLFHRSFGPETHLEIENDAILKILGALRW 945
Query: 650 LSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGV 701
S+ + + WL+ VL F A++KY VKLVA EE T G+
Sbjct: 946 SSDEEKTFDQWLQNVLAPSFAKARQKYVPATPFAVKLVASRDSSAEEETTGI 997
>gi|77548259|gb|ABA91056.1| expressed protein [Oryza sativa Japonica Group]
Length = 1131
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 248/764 (32%), Positives = 373/764 (48%), Gaps = 84/764 (10%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASIADQCQ 59
M+SFVPFGGF E + C RCQQC++K EQE+ S G TA D Q
Sbjct: 397 MDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE--DHHQ 454
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHRTQ---SL 109
LPS LQ M P N D +K ++D + L SKI KKW++ C LH+ +
Sbjct: 455 GGLPSLLQNGSMMGP--NNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQDHQRINR 512
Query: 110 QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFP 169
FP +G DK+ +AN+S S + V +V + + + S++
Sbjct: 513 DPYKPFPRYIGVP--TDKERSANSSKGSESVGVQK----DVIKPCAVSAVHSSSTARPIS 566
Query: 170 FHTVSGAKNDSLLSKLREKSSNAD--LDSGGSRSP-CCLSNSSVDDGSRKSPTPVTSVTT 226
+V+ +N+ L+ L+ + S +D L G +S LSN D SP+ V T
Sbjct: 567 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPD-DHVSPSSAAPVET 625
Query: 227 DLGLGL-----------LGIGSAPTSNEPKEPISK---DLTERSQELS----GCCSATVN 268
DL LG S + K DL + +LS C +++N
Sbjct: 626 DLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN 685
Query: 269 -GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
G S+ S +S P DLSN+K L L + + Q+EA+S I
Sbjct: 686 VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEALSAI 745
Query: 317 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 376
++I + R+ E G + R DIW F G D K++IA+ALAE+++G K+N I DL
Sbjct: 746 CESIVRCRST-ESRRGPN-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKDNLIYLDLNL 803
Query: 377 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 436
QD D FRGKT D + +L KK SV++L+N+D+AD VQ+SL
Sbjct: 804 QDW---------------DDSSFRGKTGIDCIVEQLSKKRQSVLFLDNIDRADCLVQDSL 848
Query: 437 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQ 496
S AI++G+ D G+ V ++++I V + S ++ ++ E FSEEKI + +
Sbjct: 849 SDAIKSGRFQDMRGKVVDINDSIVVLSRSMIQGSKNGLEE--GLSFSEEKILATRGHRLK 906
Query: 497 ILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDTSEMVK 549
IL+EP A+ + S K+ S Q L +KRKL +D + ++ K
Sbjct: 907 ILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSISDDQEKLQESPSSSK 966
Query: 550 RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNF 609
R HR+ + DLNLP +EDE L D D + +S NT+ + + + FK F+F
Sbjct: 967 RLHRTSSVPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKSIDALLHSVDGSINFKPFDF 1026
Query: 610 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNR-VIEDWLEKVLVRG 668
D LA+ +L++ + RK +GSEC+LEID MEQ+LAAA+ SE +R + WLE+V R
Sbjct: 1027 DKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAAWKSEEDRKPVPTWLEQVFARS 1086
Query: 669 FLDAQEKYNLTANSIVKLVACEGHF--LEELTPGVCLPPKLVLN 710
+ + K ++S ++LVACE ++ GV LPP+++L+
Sbjct: 1087 LDELKLKRKHVSSSTLRLVACEDTVPAVKGDGLGVLLPPRIILD 1130
>gi|222615364|gb|EEE51496.1| hypothetical protein OsJ_32651 [Oryza sativa Japonica Group]
Length = 926
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 238/740 (32%), Positives = 357/740 (48%), Gaps = 82/740 (11%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIAS-SKGGFTASIADQCQ 59
M+SFVPFGGF E + C RCQQC++K EQE+ S G TA D Q
Sbjct: 216 MDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAE--DHHQ 273
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHRTQ---SL 109
LPS LQ M P N D +K ++D + L SKI KKW++ C LH+ +
Sbjct: 274 GGLPSLLQNGSMMGP--NNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQDHQRINR 331
Query: 110 QVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFP 169
FP +G DK+ +AN+S S + V +V + + + S++
Sbjct: 332 DPYKPFPRYIGVP--TDKERSANSSKGSESVGVQK----DVIKPCAVSAVHSSSTARPIS 385
Query: 170 FHTVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTT 226
+V+ +N+ L+ L+ + S +D + G LSN D SP+ V T
Sbjct: 386 SPSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPD-DHVSPSSAAPVET 444
Query: 227 DLGLGL-----------LGIGSAPTSNEPKEPISK---DLTERSQELS----GCCSATVN 268
DL LG S + K DL + +LS C +++N
Sbjct: 445 DLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN 504
Query: 269 -GSISNQLAQSSSSS-----------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
G S+ S +S P DLSN+K L L + + Q+EA+S I
Sbjct: 505 VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEALSAI 564
Query: 317 SQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 376
++I + R+ E G + R DIW F G D K++IA+ALAE+++G K+N I DL
Sbjct: 565 CESIVRCRST-ESRRGPN-RNDIWLCFHGSDSMAKKRIAVALAELMHGSKDNLIYLDLNL 622
Query: 377 QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 436
QD D FRGKT D + +L KK SV++L+N+D+AD VQ+SL
Sbjct: 623 QDW---------------DDSSFRGKTGIDCIVEQLSKKRQSVLFLDNIDRADCLVQDSL 667
Query: 437 SKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQ 496
S AI++G+ D G+ V ++++I V + S ++ ++ E FSEEKI + +
Sbjct: 668 SDAIKSGRFQDMRGKVVDINDSIVVLSRSMIQGSKNGLEE--GLSFSEEKILATRGHRLK 725
Query: 497 ILIEP--ALVNRSSSQKLSASETSEGMSHQKLL-----NKRKLIGRNDNPQQHDTSEMVK 549
IL+EP A+ + S K+ S Q L +KRKL +D + ++ K
Sbjct: 726 ILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSISDDQEKLQESPSSSK 785
Query: 550 RAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNF 609
R HR+ + DLNLP +EDE L D D + +S NT+ + + + FK F+F
Sbjct: 786 RLHRTSSVPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKSIDALLHSVDGSINFKPFDF 845
Query: 610 DALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNR-VIEDWLEKVLVRG 668
D LA+ +L++ + RK +GSEC+LEID MEQ+LAAA+ SE +R + WLE+V R
Sbjct: 846 DKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAAWKSEEDRKPVPTWLEQVFARS 905
Query: 669 FLDAQEKYNLTANSIVKLVA 688
+ + K ++S ++LVA
Sbjct: 906 LDELKLKRKHVSSSTLRLVA 925
>gi|297849012|ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
gi|297338229|gb|EFH68646.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 223/720 (30%), Positives = 330/720 (45%), Gaps = 159/720 (22%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLC-QNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQ 59
M SFVPFGGFF + S+F+ PL Q +SRC C+EK QE+ A K + S+ADQC
Sbjct: 401 MGSFVPFGGFFSSTSDFRVPLSSTVNQTLSRCHLCNEKYLQEVAAVLKASSSLSLADQCS 460
Query: 60 SVLPSWLQMAEPD-------SNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQSLQVG 112
LP WL+ E S+KALD + + + KKWD+ICQS+H T ++
Sbjct: 461 EKLPPWLRAVETKEDKGTTGSSKALD--DANTSASQTAALQKKWDNICQSIHHTPAI--- 515
Query: 113 SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHT 172
+GFQ +V S P+ +E + R+ F
Sbjct: 516 ----PKLGFQ--------------------------SVSSQFPVQTEK--SVRTPTSFLE 543
Query: 173 VSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGL 232
S N + P + + + +R +P++ VTTD GLG+
Sbjct: 544 TSKLLNPPI------------------SKPKPMEDLTTSVTNRTVSSPLSCVTTDFGLGV 585
Query: 233 LGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL 292
+ A + E K K L T+N S+ + +
Sbjct: 586 I---YASKNQESKTAREKPLL-----------VTLNSSLEHTYQK--------------- 616
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKR 352
++K+L L+ K+ WQ EA++ ISQ I +T + AS IW GPD GK+
Sbjct: 617 -DFKSLRELLSRKVAWQTEAVNAISQIICGCKTDSTRRNQAS---GIWLALLGPDKVGKK 672
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
K+A+AL+E+ +GG+ N IC D + +++ +FRGKT+ DY+ EL
Sbjct: 673 KVAMALSEVFFGGQVNCICVDFGAEHCFLDD--------------KFRGKTVVDYITAEL 718
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI 472
+KP SVV LENV+KAD Q LS+A+ TGK+ DS+GR +S+ N I V S +D
Sbjct: 719 SRKPHSVVLLENVEKADFPDQMRLSEAVSTGKIRDSHGRVISMKNVIVVATSGIAKD-NA 777
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKL 532
K KF E+++ A+S QI KL + K
Sbjct: 778 TDHVTKPVKFPEDQVLSARSWKLQI---------------------------KLGDSTK- 809
Query: 533 IGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQ 592
IG N + +T + + RS LDLNLP E EV LD + +E++ +W
Sbjct: 810 IGVNKRKHELETEQRAVKVQRS---YLDLNLPVNETEV-SLDHE-------TEDSNTWFD 858
Query: 593 DFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLS- 651
DF Q V FK +FD LA+ I + I++ F + GSE LE+D++V+ Q+LAA++ S
Sbjct: 859 DFIEQVDGKVTFKPVDFDGLAKNIQEKISSHFERCFGSETHLELDQEVIIQILAASWSSL 918
Query: 652 ----ESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKL 707
E + ++ W++ VL F +A++KY VKLVA L G+ LP K+
Sbjct: 919 SSDEEEGKTVDQWMQTVLAPSFAEAKQKYGSNPMLAVKLVASSSG----LASGIELPAKV 974
>gi|297823931|ref|XP_002879848.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
gi|297325687|gb|EFH56107.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
Length = 908
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/434 (37%), Positives = 240/434 (55%), Gaps = 47/434 (10%)
Query: 263 CSATVNGSISNQL-------AQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 315
CS T + L QS SS C D ++K ++R LT+++ QDEA V
Sbjct: 495 CSVTAGSGLKKHLDSKDFSQPQSVSSYCLDNPRDLSAESFKIIYRRLTDRVSGQDEAARV 554
Query: 316 ISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 375
IS ++Q RRD+W N GPD GKR++++ LAEI+Y + ++ DL
Sbjct: 555 ISCALSQ-------PPKIVTRRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRYMAVDLG 607
Query: 376 PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 435
+ M+ D+++ RGKT+ D++ + + P VV+LEN++KAD +Q S
Sbjct: 608 AAEHGMDG---------CDDAMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQIS 658
Query: 436 LSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLT 495
LSKAI+TGK DS+GREV + N +FV SS ED+ I S +SEEK+ RAK R
Sbjct: 659 LSKAIETGKFMDSHGREVGIGNTMFVMTSSSPEDSGIRTS------YSEEKLLRAKGRQV 712
Query: 496 QILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSP 555
+I IE + L + G + +NKRKL+G + DT E VKR +R+
Sbjct: 713 EIWIE-------TVPSLPMVRSVYGPTS---VNKRKLMGLGKLQETKDTVETVKRWNRTT 762
Query: 556 TRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFN-QRVKIVAFKAFNFDALAE 614
LDLNLPA+E E+ + EN+ WL + N +R+ V FK F+F+ LAE
Sbjct: 763 NGVLDLNLPAQETEI-------EEKDHCEENSNVWLMNLKNHERLIEVPFKPFDFEGLAE 815
Query: 615 KILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQE 674
KI K + F K V S+CLLE+D K++E+LLAA Y S+S + I++ +EK++ R FL +E
Sbjct: 816 KIKKSVKEIFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDIKELMEKIMSRVFLKIKE 875
Query: 675 KYNLTANSIVKLVA 688
+Y +T + +VKLV
Sbjct: 876 RYEITTSCVVKLVG 889
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 21/83 (25%)
Query: 3 SFVPFGGFF-PTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSV 61
SFVPFGGFF TPS+ K P G + ++ G +SI+DQ QS
Sbjct: 399 SFVPFGGFFSTTPSDLKLPFSGFNKEIT-------------------GPVSSISDQTQST 439
Query: 62 LPSWLQM-AEPDSNKALDLKTKE 83
LP WLQM D N+ +KTKE
Sbjct: 440 LPPWLQMTTRADLNQKSGVKTKE 462
>gi|42571145|ref|NP_973646.1| heat shock-related protein [Arabidopsis thaliana]
gi|330254692|gb|AEC09786.1| heat shock-related protein [Arabidopsis thaliana]
Length = 910
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 229/415 (55%), Gaps = 45/415 (10%)
Query: 277 QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
QS SS D + ++K ++R LT+ + QDEA VIS ++Q + R
Sbjct: 519 QSVSSYSFDNPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQ-------PPKSVTR 571
Query: 337 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG-- 394
RD+W N GPD GKR++++ LAEI+Y + F+ DL + Q +GG
Sbjct: 572 RDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAE-----------QGMGGCD 620
Query: 395 DSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS 454
D ++ RGKT+ D++ + + P VV+LEN++KAD +Q SLSKAI+TGK DS+GREV
Sbjct: 621 DPMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQMSLSKAIETGKFMDSHGREVG 680
Query: 455 VSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 514
+ N IFV SS A +SEEK+ R K R +I IE +S+
Sbjct: 681 IGNTIFVMTSSSQGSA-------TTTSYSEEKLLRVKGRQVEIRIE----------TVSS 723
Query: 515 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 574
+ +NKRKL+G + + DT E VKR +R+ LDLNLPA+E E+
Sbjct: 724 LPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEI---- 779
Query: 575 SDDDRNSDSSENTKSWLQDFFNQRVKI-VAFKAFNFDALAEKILKDINASFRKTVGSECL 633
+ EN+ WL + N + I V FK F+F+ LAEKI K + +F K V S+CL
Sbjct: 780 ---EEKYHCEENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCL 836
Query: 634 LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVA 688
LE+D K++E+LLAA Y S+S + I++ LE ++ FL +E+Y +T + +VKLV
Sbjct: 837 LEVDPKIIERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVG 891
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 20/68 (29%)
Query: 3 SFVPFGGFF-PTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSV 61
SFVPFGGFF TPSE K P G ++ G +SI+DQ QS
Sbjct: 399 SFVPFGGFFSTTPSELKLPFSGFKTEIT-------------------GPVSSISDQTQST 439
Query: 62 LPSWLQMA 69
LP WLQM
Sbjct: 440 LPPWLQMT 447
>gi|4587988|gb|AAD25929.1|AF085279_2 hypothetical protein [Arabidopsis thaliana]
Length = 798
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 229/415 (55%), Gaps = 45/415 (10%)
Query: 277 QSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
QS SS D + ++K ++R LT+ + QDEA VIS ++Q + R
Sbjct: 407 QSVSSYSFDNPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQ-------PPKSVTR 459
Query: 337 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG-- 394
RD+W N GPD GKR++++ LAEI+Y + F+ DL + Q +GG
Sbjct: 460 RDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAE-----------QGMGGCD 508
Query: 395 DSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS 454
D ++ RGKT+ D++ + + P VV+LEN++KAD +Q SLSKAI+TGK DS+GREV
Sbjct: 509 DPMRLRGKTMVDHIFEVMCRNPFCVVFLENIEKADEKLQMSLSKAIETGKFMDSHGREVG 568
Query: 455 VSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 514
+ N IFV SS A +SEEK+ R K R +I IE +S+
Sbjct: 569 IGNTIFVMTSSSQGSA-------TTTSYSEEKLLRVKGRQVEIRIE----------TVSS 611
Query: 515 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 574
+ +NKRKL+G + + DT E VKR +R+ LDLNLPA+E E+
Sbjct: 612 LPMVRSVYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEI---- 667
Query: 575 SDDDRNSDSSENTKSWLQDFFNQRVKI-VAFKAFNFDALAEKILKDINASFRKTVGSECL 633
+ EN+ WL + N + I V FK F+F+ LAEKI K + +F K V S+CL
Sbjct: 668 ---EEKYHCEENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCL 724
Query: 634 LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVA 688
LE+D K++E+LLAA Y S+S + I++ LE ++ FL +E+Y +T + +VKLV
Sbjct: 725 LEVDPKIIERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVG 779
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 20/68 (29%)
Query: 3 SFVPFGGFF-PTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSV 61
SFVPFGGFF TPSE K P G ++ G +SI+DQ QS
Sbjct: 287 SFVPFGGFFSTTPSELKLPFSGFKTEIT-------------------GPVSSISDQTQST 327
Query: 62 LPSWLQMA 69
LP WLQM
Sbjct: 328 LPPWLQMT 335
>gi|242082468|ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
gi|241942352|gb|EES15497.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
Length = 1128
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 229/763 (30%), Positives = 362/763 (47%), Gaps = 82/763 (10%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQ 59
+ESFVPFGGF E + C RCQQC+++ EQE+ +G G TA + Q
Sbjct: 394 VESFVPFGGFMCDTYEANS-----CPQALRCQQCNDRYEQEVATIIRGSGITA---EAHQ 445
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHRTQSLQVG 112
LPS L M P N D LK ++D + L +KI KKW++ C LH Q
Sbjct: 446 EGLPSMLHNGSMMGP--NNGFDALKVRDDHMVLSTKIQNLKKKWNEYCLRLH--QGCNRI 501
Query: 113 SQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHT 172
++ P + F+ D + + + +S + V + S + + + +
Sbjct: 502 NRDPCQL-FRHHMDVRVDRERCANPNQSSQSLALQREVIRPSAVSSLHTNTTAKSISAPS 560
Query: 173 VSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRK--SPTPVTSVTTDLGL 230
+S N L L+ + S +D P SNSS D SP+ +VTTDL L
Sbjct: 561 ISTQMNADLALNLQVRQSKSDEPLQDRAVPSQHSNSSNCDNPEDHVSPSSAAAVTTDLAL 620
Query: 231 GL-LGIGSAPTSNEPKEPISK-------------DLTERSQELSG----CCSATVNGSIS 272
G S +SN ++ + DL + S C ++ N +
Sbjct: 621 ATPRGSSSKDSSNALRKHVEDAEGSIQLMPKKVDDLNLKPPHFSAQPYTCFRSSSNWDQT 680
Query: 273 NQLAQSSSSS------------CPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 320
+ A ++S P +DLSN+K L L + + Q+EA+S I +I
Sbjct: 681 SPSALHPAASGGASAFGQWQRPSPLAAQTYDLSNYKLLMERLFKAVGRQEEALSAICASI 740
Query: 321 AQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE 380
+ R+ E H GA+ + DIWF+F GPD KR++A+ALAE+++ EN I DL D
Sbjct: 741 VRCRS-MERHRGANKKNDIWFSFYGPDSIAKRRVAVALAELMHSSSENLIYLDLSLHD-- 797
Query: 381 MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAI 440
NP FRGK D ++ EL KK SV++L+NVDKAD VQ SL A+
Sbjct: 798 WGNP-------------NFRGKRATDCISEELRKKRRSVIFLDNVDKADCLVQESLIHAM 844
Query: 441 QTGKLPDSYGREVS-VSNAIFVTASSFVEDARILPSEM-KDCKFSEEKIYRAKSRLTQIL 498
+TG+ D +G V+ ++++I V ++ ++ + M +D FSEEK+ A+ +I+
Sbjct: 845 ETGRYKDLHGGRVADLNDSIVVLSTRMIQGYQDASLGMEQDNAFSEEKVVAARGHQLKII 904
Query: 499 IEPALVN--RSSSQKLSAS-----ETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRA 551
+EP N S K+ S S+ L+KRKL + + ++ KR
Sbjct: 905 VEPGTANIGGDSGGKVVVSSRHSLRNSQASLLSSSLSKRKLHISDGQEKTAESPSTSKRL 964
Query: 552 HRSPTRNLDLNLPAEEDEV-LVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFD 610
HR+ + DLNLP +E E D + +SS + + ++ + + + FK F+F
Sbjct: 965 HRTSSIPFDLNLPGDEAEAHDGDDDSSSSHENSSSDLEGYVGNLLRSVDESINFKPFDFG 1024
Query: 611 ALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESN--RVIEDWLEKVLVRG 668
L E I+++ +++ KT+GS C LEID MEQ++AAA+ S+S+ R + W+E+V R
Sbjct: 1025 KLCEDIMQEFSSTMSKTLGSRCRLEIDAVAMEQVVAAAWASDSHEKRPVRTWVEQVFARS 1084
Query: 669 FLDAQEKYNLTANSIVKLVACEGHF-LEELTPGVCLPPKLVLN 710
+ + ++ ++LVACE ++E G LP +VL+
Sbjct: 1085 LEQLKVRCKNLSSCTLRLVACENEMPVKEDGFGAFLPSTIVLD 1127
>gi|145323770|ref|NP_001077474.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|8954026|gb|AAF82200.1|AC067971_8 Strong similarity to an unknown protein F23F1.11 gi|7486038 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. ESTs
gb|T75672, gb|N65732 and gb|AA404793 come from this gene
[Arabidopsis thaliana]
gi|332189971|gb|AEE28092.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 216/714 (30%), Positives = 323/714 (45%), Gaps = 146/714 (20%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLC-QNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQ 59
M SFVPFGGFF + S F+ PL Q +SRC C+EK QE+ A K G + S+AD+C
Sbjct: 401 MGSFVPFGGFFSSTSNFRVPLSSTVNQTLSRCHLCNEKYLQEVAAVLKAGSSLSLADKCS 460
Query: 60 SVLPSWLQMAEPDSNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQSLQVGSQFPTVV 119
L WL+ E TKED S +K DD S +T +LQ
Sbjct: 461 EKLAPWLRAIE----------TKEDKGITGS--SKALDDANTSASQTAALQ--------- 499
Query: 120 GFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFHTVSGAKND 179
K +N S T A G + +V P+ +E + + + +
Sbjct: 500 ------KKWDNICQSIHHTPAFPKLG-FQSVSPQFPVQTEKSVRTPTSY-------LETP 545
Query: 180 SLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDLGLGLLGIGSAP 239
LL+ K P + + + +R P++ VTTD GLG++ A
Sbjct: 546 KLLNPPISK-------------PKPMEDLTASVTNRTVSLPLSCVTTDFGLGVI---YAS 589
Query: 240 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 299
+ E K K + T+N S+ + + ++K+L
Sbjct: 590 KNQESKTTREKPML-----------VTLNSSLEHTYQK----------------DFKSLR 622
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALA 359
L+ K+ WQ EA++ ISQ I +T + AS IW GPD GK+K+A+ L+
Sbjct: 623 EILSRKVAWQTEAVNAISQIICGCKTDSTRRNQAS---GIWLALLGPDKVGKKKVAMTLS 679
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+ +GGK N+IC D + +++ +FRGKT+ DYV EL +KP SV
Sbjct: 680 EVFFGGKVNYICVDFGAEHCSLDD--------------KFRGKTVVDYVTGELSRKPHSV 725
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKD 479
V LENV+KA+ Q LS+A+ TGK+ D +GR +S+ N I V S +D +K
Sbjct: 726 VLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVVVTSGIAKD-NATDHVIKP 784
Query: 480 CKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNP 539
KF EE++ A+S QI + G + + +NKRK
Sbjct: 785 VKFPEEQVLSARSWKLQIKL--------------------GDATKFGVNKRKY------- 817
Query: 540 QQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRV 599
+ +T++ + RS LDLNLP E E +DR+ +W +F +
Sbjct: 818 -ELETAQRAVKVQRS---YLDLNLPVNETEFSPDHEAEDRD--------AWFDEFIEKVD 865
Query: 600 KIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLS------ES 653
V FK +FD LA+ I + I + F + GSE LE+D++V+ Q+LAA++ S E
Sbjct: 866 GKVTFKPVDFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILAASWSSLSSGEEEG 925
Query: 654 NRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGHFLEELTPGVCLPPKL 707
+++ W++ VL R F +A++KY VKLVA L GV LP K+
Sbjct: 926 RTIVDQWMQTVLARSFAEAKQKYGSNPMLGVKLVASSSG----LASGVELPAKV 975
>gi|357157735|ref|XP_003577897.1| PREDICTED: uncharacterized protein LOC100845733 [Brachypodium
distachyon]
Length = 1122
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 234/772 (30%), Positives = 371/772 (48%), Gaps = 101/772 (13%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQ 59
MESFVPFGG + + C RCQ C+++ +QE+ +G G TA D Q
Sbjct: 387 MESFVPFGGVTNDGYDANSLAANSCPQALRCQHCNDRYDQEVATIIRGSGITAE--DHHQ 444
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKITK---KWDDICQSLHR-TQSLQV 111
LPS LQ M P N D LK ++D + L+SKI KW++ C LH+ Q +
Sbjct: 445 GGLPSLLQNGSMIGP--NNGFDALKVRDDQMVLKSKIRNLQTKWNEYCLRLHQGCQRINR 502
Query: 112 GSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFH 171
GS D++ AN S + ++ + +P N + ++S+ P
Sbjct: 503 GSYQLFSNYIPVPADRERPANPSKGPESVALQREVIRPLV--VPASQMNAT-TKSISPPS 559
Query: 172 TVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
+ DS+L KL+ S D D G LSN D SP+ SV TDL
Sbjct: 560 ISKQSHEDSVL-KLQASHSKGDEHLQDRGVQSRHENLSNFH-DCEDHVSPS---SVATDL 614
Query: 229 GLGLLGIGSAPTSNEP--KEPISKDLT--ERSQELS-----------GCCSATVN-GSIS 272
LG S+ +N K+ + +L+ ++ +L+ C ++ N G S
Sbjct: 615 VLGTPRGSSSKGTNSACWKQSVDAELSIPKKVNDLNLKPPQVFAQPYACSRSSTNMGQPS 674
Query: 273 NQLAQSSSSSCPDLNCQF-----------DLSNWKTLFRALTEKIDWQDEAISVISQTIA 321
S++S + DLSN K L +L + + Q+EA+ I ++IA
Sbjct: 675 PSALHSAASGGMSAFGHWQKPSHLAAQGSDLSNSKQLVESLFKVVGRQEEALKAICESIA 734
Query: 322 QRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEM 381
++ E GA+ + DIWF+F G D KRK+ +ALAE+++G KEN I DL PQD
Sbjct: 735 WCKS-MERRRGANRKNDIWFSFHGSDSMAKRKVGVALAELLHGSKENMIYLDLSPQDW-- 791
Query: 382 NNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQ 441
GDS +RGKT D + EL KK SV++L+NVDKAD VQ++L A +
Sbjct: 792 ------------GDS-SYRGKTGTDCIVDELSKKRRSVIFLDNVDKADCLVQDTLIHASE 838
Query: 442 TGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCK-FSEEKIYRAKSRLTQILIE 500
TG+ D G+EV +++++ V ++ ++ +P ++D FSEEKI A+ ++L+E
Sbjct: 839 TGRFRDLRGKEVDINDSVVVLSTRTARGSKSVPFGVEDGHTFSEEKILAARGHQLKLLVE 898
Query: 501 PALV-NRSSSQKLSAS------ETSEGMSHQKLLNKRKL-IGRNDNPQQHDTSEMVKRAH 552
+V +R S K+S S + + ++KRKL I + +Q ++ + KR H
Sbjct: 899 SDMVISRGPSGKVSVSPRHPLTKIQASLYSGSSISKRKLNISDDQELKQQESPSISKRLH 958
Query: 553 RSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENT-----------KSWLQDFFNQRVKI 601
R+ + DLNLP DDD ++D+ ++ +S + +
Sbjct: 959 RTSSVPFDLNLPM----------DDDGSNDADNHSSSNDNSSGTPERSSIDSLLCSVDES 1008
Query: 602 VAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLS-ESNRVIEDW 660
V FK F+F+ +A+ L++++ + R +G C L++D M+Q+LA A+ S E R ++ W
Sbjct: 1009 VDFKPFDFNKVADDTLQELSDTLRGVLGPGCTLQVDVGAMDQMLAVAWTSLEGKRPLQAW 1068
Query: 661 LEKVLVRGFLDAQEKYNLTA-NSIVKLVACE--GHFLEELTPGVCLPPKLVL 709
LE+V R + + K A +S ++LVACE E G LP +++L
Sbjct: 1069 LEQVFSRSLEELKLKCGKHACSSTLRLVACEDIAGVKEHDGFGGLLPSRIIL 1120
>gi|326513004|dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 238/757 (31%), Positives = 362/757 (47%), Gaps = 110/757 (14%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQ 59
+ESF PFGG + + RCQQC+++CEQE+ KG G TA Q
Sbjct: 391 VESFSPFGGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVKGSGITAD-----Q 445
Query: 60 SVLPSWLQMAEPDS-NKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-TQSLQVGS 113
LPS LQ N LD +K ++D + L+SKI KKW++ C LH+ +Q + G
Sbjct: 446 GGLPSLLQNGSMMGLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGSQRINTGP 505
Query: 114 Q--FPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFH 171
FP + ++ + GS SV V S + N + +SV P
Sbjct: 506 YQLFPNYAAVP-VDTERATILSKGSE---SVTLQRDVIRPSAVSATQTNATPKKSVSP-P 560
Query: 172 TVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
++S +N+ L+ L+ + S D D LS S D SP+ SV TDL
Sbjct: 561 SISNQRNEGLVLNLQGRHSKGDEQFQDRHAQLRQEHLS-SCHDREDHMSPSAAASVATDL 619
Query: 229 GLGL---------------LGIGSAPTSN-----------EPKEPISKDLTERSQELSGC 262
L + + +++ EP +P ++ + RS G
Sbjct: 620 VLSTPRGSSSKGTSSVSWKHAVDAEKSTHLTPNKVDDLNMEPPQPFAQPYSSRSSTNMGQ 679
Query: 263 CSATV-----NGSIS--NQLAQSSSSSCPDLNCQ-FDLSNWKTLFRALTEKIDWQDEAIS 314
S + +G +S Q Q S L Q DLS++K L L + + Q+EA+S
Sbjct: 680 TSPSALHSPASGGVSAFGQWRQKPS----QLAAQGSDLSDYKLLVERLFKVVGRQEEALS 735
Query: 315 VISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADL 374
I +I ++ E GAS + DIWF+F G D KR++A+ALAE+++G +++FI DL
Sbjct: 736 AICGSIVGCQS-TERRRGASRKNDIWFSFHGFDSVAKRRVAVALAELVHGSQDSFIHLDL 794
Query: 375 CPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 434
QD GG S FRGKT D + EL KK V++L+N+DKAD VQ+
Sbjct: 795 SLQDW-------------GGSS--FRGKTGIDCIVEELSKKRRCVIFLDNIDKADCLVQD 839
Query: 435 SLSKAIQTGKLPDSYGREVSVSNAIFV----------TASSFVEDARILPSEMKDCKFSE 484
SLS A+ TG+ D G+EV+++++I + AS VE+ I FSE
Sbjct: 840 SLSHAVDTGRFRDMRGKEVAINDSIVILSTRLARCSKNASVGVEEGHI---------FSE 890
Query: 485 EKIYRAKSRLTQILIEPALVNRS----SSQKLSASETS-----EGMSHQKLLNKRKLIGR 535
EKI A+ + +ILIE V S SS K++AS + + + ++KRKL
Sbjct: 891 EKILAARGQQLKILIESGTVITSRGSPSSSKVAASPSHPLTKIQTSVYSGCVSKRKLDIS 950
Query: 536 NDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFF 595
+D + ++ KR HR+ + DLNLP ED D DD ++DS + + L
Sbjct: 951 DDREKLLESPSNPKRPHRTSSVPFDLNLPVGEDGSSDADGDDSSSNDSPDESIDSLLGLV 1010
Query: 596 NQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSES-N 654
+ + + FKAF+F LA IL++++ +G LE+ MEQ+LAA+++SE
Sbjct: 1011 D---RAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTLEVGDGAMEQMLAASWVSEDRR 1067
Query: 655 RVIEDWLEKVLVRGFLDAQEKYNLTA-NSIVKLVACE 690
R ++ WLE+V R + + K++ A NS ++LVAC+
Sbjct: 1068 RPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACD 1104
>gi|326488024|dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 238/757 (31%), Positives = 361/757 (47%), Gaps = 110/757 (14%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQ 59
+ESF PFGG + + RCQQC+++CEQE+ KG G TA Q
Sbjct: 391 VESFSPFGGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVKGSGITAD-----Q 445
Query: 60 SVLPSWLQMAEPDS-NKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR-TQSLQVGS 113
LPS LQ N LD +K ++D + L+SKI KKW++ C LH+ +Q + G
Sbjct: 446 GGLPSLLQNGSMMGLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGSQRINTGP 505
Query: 114 Q--FPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSVFPFH 171
FP + ++ + GS SV V S + N + +SV P
Sbjct: 506 YQLFPNYAAVP-VDTERATILSKGSE---SVTLQRDVIRPSAVSATQTNATPKKSVSP-P 560
Query: 172 TVSGAKNDSLLSKLREKSSNAD---LDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTTDL 228
++S +N+ L+ L+ + S D D LS S D SP+ SV TDL
Sbjct: 561 SISNQRNEGLVLNLQGRHSKGDEQFQDRHAQLRQEHLS-SCHDREDHMSPSAAASVATDL 619
Query: 229 GLGL---------------LGIGSAPTSN-----------EPKEPISKDLTERSQELSGC 262
L + + +++ EP +P ++ + RS G
Sbjct: 620 VLSTPRGSSSKGTSSVSWKHAVDAEKSTHLTPNKVDDLNMEPPQPFAQPYSSRSSTNMGQ 679
Query: 263 CSATV-----NGSIS--NQLAQSSSSSCPDLNCQ-FDLSNWKTLFRALTEKIDWQDEAIS 314
S + +G +S Q Q S L Q DLS++K L L + + Q+EA+S
Sbjct: 680 TSPSALHSPASGGVSAFGQWRQKPS----QLAAQGSDLSDYKLLVERLFKVVGRQEEALS 735
Query: 315 VISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADL 374
I +I ++ E GAS + DIWF+F G D KR++A+ALAE+++G +++FI DL
Sbjct: 736 AICGSIVGCQS-TERRRGASRKNDIWFSFHGFDSVAKRRVAVALAELVHGSQDSFIHLDL 794
Query: 375 CPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 434
QD GG S FRGKT D + EL KK V++L+N+DKAD VQ+
Sbjct: 795 SLQDW-------------GGSS--FRGKTGIDCIVEELSKKRRCVIFLDNIDKADCLVQD 839
Query: 435 SLSKAIQTGKLPDSYGREVSVSNAIFV----------TASSFVEDARILPSEMKDCKFSE 484
SLS A+ TG+ D G+EV+++++I + AS VE+ I FSE
Sbjct: 840 SLSHAVDTGRFRDMRGKEVAINDSIVILSTRLARCSKNASVGVEEGHI---------FSE 890
Query: 485 EKIYRAKSRLTQILIEPALVNRS----SSQKLSASETS-----EGMSHQKLLNKRKLIGR 535
EKI A+ + +ILIE V S SS K++AS + + + ++KRKL
Sbjct: 891 EKILAARGQQLKILIESGTVITSRGSPSSSKVAASPSHPLTKIQTSVYSGCVSKRKLDIS 950
Query: 536 NDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFF 595
+D + ++ KR HR+ + DLNLP ED D DD ++DS + + L
Sbjct: 951 DDREKLLESPSNPKRPHRTSSVPFDLNLPVGEDGSSDADGDDSSSNDSPDESIDSLLGLV 1010
Query: 596 NQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSES-N 654
+ + + FKAF+F LA IL++++ +G LE+ MEQ+LAA++ SE
Sbjct: 1011 D---RAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTLEVGDGAMEQMLAASWASEDRR 1067
Query: 655 RVIEDWLEKVLVRGFLDAQEKYNLTA-NSIVKLVACE 690
R ++ WLE+V R + + K++ A NS ++LVAC+
Sbjct: 1068 RPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACD 1104
>gi|242067163|ref|XP_002448858.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
gi|241934701|gb|EES07846.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
Length = 1050
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 223/416 (53%), Gaps = 34/416 (8%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
+DLSN+K L L + + Q+EA+S I +I + R+ E GA+ + DIWF+F GPD
Sbjct: 650 YDLSNYKLLMERLFKAVGRQEEALSAICASIERCRS-MERRRGANKKNDIWFSFYGPDSI 708
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
KR++ ALAE+++GG EN I DL D NP FRGK D +A
Sbjct: 709 AKRRVGEALAELMHGGSENLIYLDLSLHD--WGNP-------------NFRGKRATDCIA 753
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS-VSNAIFVTASSFVE 468
EL KK SV++L+N+D+AD VQ SL A++TG+ D +G V+ ++N+I V ++ ++
Sbjct: 754 EELRKKRHSVIFLDNIDRADCLVQESLIHAMETGRYKDLHGGRVADLNNSIVVLSTRMIQ 813
Query: 469 DARILPSEM-KDCKFSEEKIYRAKSRLTQILIEPALVN----------RSSSQKLSASET 517
+ M +D FSEEK+ A+ +I++EP N SS L S+
Sbjct: 814 GCQDASLGMEEDNAFSEEKVVAARGHQLKIIVEPGTANIGEDPGGKVVVSSRHSLRNSQA 873
Query: 518 SEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV-LVLDSD 576
S S L+KRKL + + ++ KR HR + DLNLP +E E D
Sbjct: 874 SLFSSS---LSKRKLHISDGQEKTAESPSTSKRLHRRSSVPFDLNLPGDEAEAHDGDDDS 930
Query: 577 DDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEI 636
+ +SS + + + + + + FK F+F L E IL++ +++ KT+GS C LEI
Sbjct: 931 SSSHENSSGDPEGSVGNLLRSVDESINFKPFDFGKLCEDILQEFSSTMSKTLGSRCRLEI 990
Query: 637 DRKVMEQLLAAAYLSESN--RVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACE 690
D MEQ++AAA+ S+S+ R + W+E+V R + + ++S ++LVACE
Sbjct: 991 DAVAMEQVVAAAWASDSHEKRPVRTWVEQVFARTLEQLKVRCKNLSSSTLRLVACE 1046
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 18/113 (15%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKG-GFTASIADQCQ 59
MESFVPFGGF P E + C RCQQC+++ EQE+ +G G T A+ Q
Sbjct: 382 MESFVPFGGFLCDPYEANS-----CPQALRCQQCNDRYEQEVATIIRGSGIT---AEAHQ 433
Query: 60 SVLPSWLQ---MAEPDSNKALD-LKTKEDGLALRSKI---TKKWDDICQSLHR 105
LPS LQ M P N D LK ++D + L +KI KKW++ C LH+
Sbjct: 434 DGLPSMLQNGSMMGP--NNGFDVLKVRDDQMVLSTKIQNLKKKWNEYCLRLHQ 484
>gi|22329388|ref|NP_172200.2| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|20260490|gb|AAM13143.1| unknown protein [Arabidopsis thaliana]
gi|30725704|gb|AAP37874.1| At1g07200 [Arabidopsis thaliana]
gi|332189970|gb|AEE28091.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 422
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 238/500 (47%), Gaps = 97/500 (19%)
Query: 214 SRKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISN 273
+R P++ VTTD GLG++ A + E K K + T+N S+ +
Sbjct: 10 NRTVSLPLSCVTTDFGLGVI---YASKNQESKTTREKPML-----------VTLNSSLEH 55
Query: 274 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
+ ++K+L L+ K+ WQ EA++ ISQ I +T + A
Sbjct: 56 TYQK----------------DFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQA 99
Query: 334 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 393
S IW GPD GK+K+A+ L+E+ +GGK N+IC D + +++
Sbjct: 100 S---GIWLALLGPDKVGKKKVAMTLSEVFFGGKVNYICVDFGAEHCSLDD---------- 146
Query: 394 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 453
+FRGKT+ DYV EL +KP SVV LENV+KA+ Q LS+A+ TGK+ D +GR +
Sbjct: 147 ----KFRGKTVVDYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVI 202
Query: 454 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
S+ N I V S +D +K KF EE++ A+S QI + A
Sbjct: 203 SMKNVIVVVTSGIAKD-NATDHVIKPVKFPEEQVLSARSWKLQIKLGDA----------- 250
Query: 514 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 573
T G +NKRK + +T++ + RS LDLNLP E E
Sbjct: 251 ---TKFG------VNKRKY--------ELETAQRAVKVQRS---YLDLNLPVNETEFSPD 290
Query: 574 DSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECL 633
+DR+ +W +F + V FK +FD LA+ I + I + F + GSE
Sbjct: 291 HEAEDRD--------AWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETH 342
Query: 634 LEIDRKVMEQLLAAAYL------SESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLV 687
LE+D++V+ Q+LAA++ E +++ W++ VL R F +A++KY VKLV
Sbjct: 343 LELDKEVILQILAASWSSLSSGEEEGRTIVDQWMQTVLARSFAEAKQKYGSNPMLGVKLV 402
Query: 688 ACEGHFLEELTPGVCLPPKL 707
A L GV LP K+
Sbjct: 403 ASSSG----LASGVELPAKV 418
>gi|413915851|gb|AFW55783.1| hypothetical protein ZEAMMB73_843327 [Zea mays]
Length = 1120
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 225/438 (51%), Gaps = 45/438 (10%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
FDLSN+K L L + + Q+EA+S I +I + R+ E GA+ + DIWF+F GPD
Sbjct: 710 FDLSNYKLLMEHLFKVVGRQEEALSAICASIVRCRS-MERRRGANKKNDIWFSFYGPDSI 768
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
KR++ +ALAE+++G N I DL D NP FRGK D +
Sbjct: 769 AKRRVGVALAELMHGSSGNLIYLDLSLND--WGNP-------------SFRGKRATDCIF 813
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVS-VSNAIFVTASSFV- 467
EL KK SV++L+N+DKAD VQ SL A++TG+ D +G V+ ++++I V ++ +
Sbjct: 814 EELRKKRRSVIFLDNIDKADCLVQESLIHAMETGRYKDLHGGRVTDLNDSIVVLSTRMIQ 873
Query: 468 --EDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEG-MSHQ 524
+DA + E FSEEK A+ +I++EP N + +S S G
Sbjct: 874 GCQDASLGVEEGN--AFSEEKAVAARGHQLKIIVEPGTTNIGGGNVVVSSRHSLGSSEAS 931
Query: 525 KLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV-------LVLDSDD 577
+KRKL + + +++ KR HR+ + DLNLP +++E S +
Sbjct: 932 SYSSKRKLHISDGQEKTEESASTSKRLHRTSSIPFDLNLPGDDEEAHDDGDDDKSSGSHE 991
Query: 578 DRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSE-CLLEI 636
+ S N W+ N FK F+F L E IL++ + + K +G+ C LEI
Sbjct: 992 NYLEGSVGNLLRWVDGSIN-------FKPFDFGKLCEDILQEFSNTTSKILGTRGCRLEI 1044
Query: 637 DRKVMEQLLAAAYLSESN----RVIEDWLEKVLVRGFLDAQEKYNLTANSIVKLVACEGH 692
D MEQ++AAA+ S+S+ R + W+E+V R + + ++ ++LV+CE
Sbjct: 1045 DAGAMEQVVAAAWASDSHENEKRPVRTWVEQVFGRSLEQVKMRCENLSSCTLRLVSCE-- 1102
Query: 693 FLEELTPGVCLPPKLVLN 710
++E G LP +++L+
Sbjct: 1103 -VKEDGFGALLPSRIILD 1119
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 2 ESFVPFGGFFPTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSV 61
ESFVPFGG E + C RCQ C+++ EQE+ + +G + AD Q
Sbjct: 396 ESFVPFGGLLCDTYEANSLTTNFCPQALRCQHCNDRYEQEVASIIRG--SGVTADAHQEG 453
Query: 62 LPSWLQM-AEPDSNKALD-LKTKEDGLALRSKIT---KKWDDICQSLHR---TQSLQVGS 113
LPS LQ SN D +K ++D + L +KI KKW++ C LH+ +
Sbjct: 454 LPSLLQNGGMMGSNNEFDAVKVRDDQMVLSTKILNLEKKWNEYCVRLHQGCNRINRDPCQ 513
Query: 114 QFPTVVGFQFLQDKKENANNSGSS 137
FP +G + +++ N N S +
Sbjct: 514 LFPHHIGVRVDRERCANPNQSAQT 537
>gi|449464332|ref|XP_004149883.1| PREDICTED: uncharacterized protein LOC101218882 [Cucumis sativus]
Length = 1029
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 191/706 (27%), Positives = 296/706 (41%), Gaps = 160/706 (22%)
Query: 1 MESFVPFGGFFPTP--SEFKNPLGGL--CQNVSRCQQCSEKCEQE----IIASSKGGFTA 52
+ES P FFPTP S+ +N L ++ C QC +K EQE I S+ +
Sbjct: 396 IESLSPLK-FFPTPPISQLRNESESLNYGSRITCCSQCMQKYEQELHKLINEESEKSSSG 454
Query: 53 SIADQCQSVLPSWLQMAEPDSNKALDLKTKEDG---LALRSK---ITKKWDDICQSLHRT 106
D S LP WLQ A+ S A + +K++ L ++ + + KKW+ C
Sbjct: 455 VKTDSNSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTC------ 508
Query: 107 QSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRS 166
LQ+ F F SST + G S + +Y
Sbjct: 509 --LQIHPNFHQSKIF--------------SSTGNMLTGISTMGLY--------------- 537
Query: 167 VFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTT 226
N +LL K + +L+ R+ N + P+ S+ T
Sbjct: 538 -----------NQNLL-KCQPCQPRLELNKSLGRTLQLNMNPQPNQ-----PSDHNSIRT 580
Query: 227 DLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL 286
DL LG +E S ++ E++++ C+ G N SS S L
Sbjct: 581 DLILG-------------QEKFSGNIPEQTRK---DCTIEFLGQNHN----SSKSEMKSL 620
Query: 287 NCQ-------FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI 339
+ Q D+ ++K + + L K+ WQ +A S ++ TI QR+ G+ GA + DI
Sbjct: 621 DIQSAKLLGITDVDSYKKILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQGAGSKGDI 680
Query: 340 WFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQF 399
W F GPD GKRK+A A++E++ G IC ++N F
Sbjct: 681 WLLFAGPDKVGKRKMASAISELVSGSIMVTICLGSQRNGRGLDN--------------NF 726
Query: 400 RGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAI 459
RG+T D +A + K P SV+ LEN+D+ADV + SL +AI++G+L DSYGRE+S+ N I
Sbjct: 727 RGRTPLDQIAEAVRKNPFSVIVLENIDEADVLFRGSLKRAIESGRLIDSYGREISLGNII 786
Query: 460 FVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSE 519
F+ + + LP ++K FS+ + K T L S +LS SE
Sbjct: 787 FILTTVW------LPDDLK--WFSDHNSFGEKELAT-------LAGESWQLRLSLSEKQS 831
Query: 520 GMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAE-EDEV-------- 570
L N+ + R +P DLN A ED+
Sbjct: 832 KRRGNWLCNEERFTK--------------TRKGTNPGLFFDLNEAANAEDDTPDGSHNSS 877
Query: 571 -LVLDSDDDRNSDSSENTK-----SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASF 624
L +D +D+ E+T + LQD + + FK NF+ + + I IN F
Sbjct: 878 DLTIDHEDEYGLSKMESTTASPALTELQDIVDD---AIIFKPVNFNHITQDIKTSINEKF 934
Query: 625 RKTVGSECL-LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
+G E + +E+ + ++++LA +L SN +E+W EK LV F
Sbjct: 935 FTIIGVEGISIELQDQALQKILAGVWL--SNTSLEEWAEKALVPSF 978
>gi|449529860|ref|XP_004171916.1| PREDICTED: uncharacterized protein LOC101223687 [Cucumis sativus]
Length = 1029
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 191/706 (27%), Positives = 295/706 (41%), Gaps = 160/706 (22%)
Query: 1 MESFVPFGGFFPTP--SEFKNPLGGL--CQNVSRCQQCSEKCEQE----IIASSKGGFTA 52
+ES P FFPTP S+ +N L ++ C QC +K EQE I S+
Sbjct: 396 IESLSPLK-FFPTPPISQLRNESESLNYGSRLTCCSQCMQKYEQELHKLINEESEKSSPG 454
Query: 53 SIADQCQSVLPSWLQMAEPDSNKALDLKTKEDG---LALRSK---ITKKWDDICQSLHRT 106
D S LP WLQ A+ S A + +K++ L ++ + + KKW+ C
Sbjct: 455 VKTDSNSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTC------ 508
Query: 107 QSLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRS 166
LQ+ F F SST + G S + +Y
Sbjct: 509 --LQIHPNFHQSKIF--------------SSTGNMLTGISTMGLY--------------- 537
Query: 167 VFPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPVTSVTT 226
N +LL K + +L+ R+ N + P+ S+ T
Sbjct: 538 -----------NQNLL-KCQPCQPRLELNKSLGRTLQLNMNPQPNQ-----PSDHNSIRT 580
Query: 227 DLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL 286
DL LG +E S ++ E++++ C+ G N SS S L
Sbjct: 581 DLILG-------------QEKFSGNIPEQTRK---DCTIEFLGQNHN----SSKSEMKSL 620
Query: 287 NCQ-------FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI 339
+ Q D+ ++K + + L K+ WQ +A S ++ TI QR+ G+ GA + DI
Sbjct: 621 DIQSAKLLGITDVDSYKKILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQGAGSKGDI 680
Query: 340 WFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQF 399
W F GPD GKRK+A A++E++ G IC ++N F
Sbjct: 681 WLLFAGPDKVGKRKMASAISELVSGSIMVTICLGSQRNGRGLDN--------------NF 726
Query: 400 RGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAI 459
RG+T D +A + K P SV+ LEN+D+ADV + SL +AI++G+L DSYGRE+S+ N I
Sbjct: 727 RGRTPLDQIAEAVRKNPFSVIVLENIDEADVLFRGSLKRAIESGRLIDSYGREISLGNII 786
Query: 460 FVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSE 519
F+ + + LP ++K FS+ + K T L S +LS SE
Sbjct: 787 FILTTVW------LPDDLK--WFSDHNSFGEKELAT-------LAGESWQLRLSLSEKQS 831
Query: 520 GMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAE-EDEV-------- 570
L N+ + R +P DLN A ED+
Sbjct: 832 KRRGNWLCNEERFTK--------------TRKGTNPGLLFDLNEAANAEDDTPDGSHNSS 877
Query: 571 -LVLDSDDDRNSDSSENTK-----SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASF 624
L +D +D+ E+T + LQD + + FK NF+ + + I IN F
Sbjct: 878 DLTIDHEDEYGLSKMESTTASPALTELQDIVDD---AIIFKPVNFNHITQDIKTSINEKF 934
Query: 625 RKTVGSECL-LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
+G E + +E+ + ++++LA +L SN +E+W EK LV F
Sbjct: 935 FTIIGVEGISIELQDQALQKILAGVWL--SNTSLEEWAEKALVPSF 978
>gi|255584936|ref|XP_002533182.1| ATP binding protein, putative [Ricinus communis]
gi|223527016|gb|EEF29205.1| ATP binding protein, putative [Ricinus communis]
Length = 983
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 180/697 (25%), Positives = 296/697 (42%), Gaps = 128/697 (18%)
Query: 1 MESFVPFGGF-FPTPSEFKNPLGGL--CQNVSRCQQCSEKCEQEIIA----SSKGGFTAS 53
+ES P GF TP+ + P + S C QC + EQE+ S+ +
Sbjct: 336 VESLSPLKGFPTVTPALLRRPTENFDPARRTSCCPQCMQSYEQELAKITPKESERSSSEL 395
Query: 54 IADQCQSVLPSWLQMAEPDS--NKALD-LKTKEDGLALRSK---ITKKWDDICQSLHRTQ 107
++ Q++LP WL+ A+ K+ D TK+ L + K + KKW D C LH
Sbjct: 396 KSEATQTLLPQWLKNAKSQDIDTKSFDQTATKDQELMSKQKSVELQKKWHDTCLRLH--- 452
Query: 108 SLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSV 167
G P VV + Q S N+Y+ N+ A +
Sbjct: 453 ---PGYHQPNVVSERITQP-----------------ALSMTNLYN------PNLHARQ-- 484
Query: 168 FPFHTVSGA-KNDSLLSKLREK-----SSNADLDSGGSRSPCCLSNSSVDDGSRKSPTPV 221
PF G +N +L K N L+S RSP S S G +P P
Sbjct: 485 -PFQPKLGLNRNLGGTPQLNSKICGTPQLNPQLNSTIDRSPQSPSQSH---GQAVTP-PG 539
Query: 222 TSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSS 281
+ V TDL LG S E I ER+++ G ++ ++ A
Sbjct: 540 SPVRTDLVLG------QAKSKENTPEIGHG--ERTKDFLGRVASEPQPKLTELQA----- 586
Query: 282 SCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWF 341
LN D ++K L R L EK+ WQ +A S ++ T+ + + G+ G S + DIW
Sbjct: 587 -IKLLNA-LDADSFKRLLRGLLEKVWWQRDAASAVATTVTRCKLGNGKQRGNSSKGDIWL 644
Query: 342 NFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRG 401
FTGPD GK+K+A+AL++++YG + C D E + V FRG
Sbjct: 645 LFTGPDRVGKKKMALALSDLVYGSNPIMVSLGSCRDDRESD--------------VNFRG 690
Query: 402 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 461
KT D + + + P SV+ LE++D+AD+ V+ S+ +A++ G+L DS+GRE+S+ N IF+
Sbjct: 691 KTAVDRIVEAVRRNPFSVIMLEDIDEADMIVRGSIKRAMERGRLSDSHGREISLGNVIFI 750
Query: 462 TASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
++++ D + KF +++L +LV+ +LS E +
Sbjct: 751 LTANWLPD---------NLKFLSNGTSLDETKLA------SLVSGGWQLRLSLCEKTAKR 795
Query: 522 SHQKLLNK-RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV--------LV 572
L ++ R R D+ D +E AEED+ L
Sbjct: 796 RASWLHDEVRPAKPRKDSGLSFDLNEAAD---------------AEEDKADGSRNSSDLT 840
Query: 573 LDSDDDRNSDS---SENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVG 629
+D +D+++ ++ + T S ++ + FK+ + +L +I + F +
Sbjct: 841 IDHEDEQSLNNRLLTPTTSSVSRELLKSVDDNIVFKSVDLGSLRSEISNSVTKKFSTIIS 900
Query: 630 SECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 666
L+I +E++ A +LS + +E+W E+ LV
Sbjct: 901 EGFSLDIQDDALEKIAAGLWLSRGS--LEEWTEEALV 935
>gi|359484916|ref|XP_002266859.2| PREDICTED: chaperone protein ClpB-like [Vitis vinifera]
Length = 1060
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 56/391 (14%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
D + K L + L EK+ WQ +A ++ T+ Q + G+ A + DIW FTGPD
Sbjct: 665 LDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKGDIWLLFTGPDRI 724
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK+K+A AL+E++ G IC DGE++ + FRGKT D +A
Sbjct: 725 GKKKMAAALSELVCGVNPIMICLGSRRDDGELD--------------MNFRGKTAVDRIA 770
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+ + SV+ LE++D+AD+ VQ S+ +A++ G+L DS+GREVS+ N IF+ ++++ D
Sbjct: 771 EAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVD 830
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNK 529
R S +EEK+ Q+ KLSASE S L ++
Sbjct: 831 NR--KSLSNSTLLNEEKLASIAGGGWQL-------------KLSASEKSAKRRANWLHDE 875
Query: 530 RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPA--EEDEV--------LVLDSDDDR 579
R+ P++ + S + + DLN A E+D L +D +D++
Sbjct: 876 ----DRSTKPRKENGSAL----------SFDLNQAADTEDDRADGSRNSSDLTIDHEDEQ 921
Query: 580 NSDSS-ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDR 638
++ S ++ N ++ FK +F+ + ++ I F +G + ++++
Sbjct: 922 GPENRCLPPTSASRELLNSVDNVITFKPVDFNPIRHQVRSCIARKFSSVMGDKLSIQVED 981
Query: 639 KVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
+ +E++L +L S +E+W EKVLV GF
Sbjct: 982 EALEKILGGVWLGRSG--LEEWAEKVLVPGF 1010
>gi|297736015|emb|CBI24053.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 56/391 (14%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
D + K L + L EK+ WQ +A ++ T+ Q + G+ A + DIW FTGPD
Sbjct: 308 LDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKGDIWLLFTGPDRI 367
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK+K+A AL+E++ G IC DGE++ + FRGKT D +A
Sbjct: 368 GKKKMAAALSELVCGVNPIMICLGSRRDDGELD--------------MNFRGKTAVDRIA 413
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+ + SV+ LE++D+AD+ VQ S+ +A++ G+L DS+GREVS+ N IF+ ++++ D
Sbjct: 414 EAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVD 473
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNK 529
R S +EEK+ Q+ KLSASE S L ++
Sbjct: 474 NR--KSLSNSTLLNEEKLASIAGGGWQL-------------KLSASEKSAKRRANWLHDE 518
Query: 530 RKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPA--EEDEV--------LVLDSDDDR 579
R+ P++ + S + + DLN A E+D L +D +D++
Sbjct: 519 ----DRSTKPRKENGSAL----------SFDLNQAADTEDDRADGSRNSSDLTIDHEDEQ 564
Query: 580 NSDSS-ENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDR 638
++ S ++ N ++ FK +F+ + ++ I F +G + ++++
Sbjct: 565 GPENRCLPPTSASRELLNSVDNVITFKPVDFNPIRHQVRSCIARKFSSVMGDKLSIQVED 624
Query: 639 KVMEQLLAAAYLSESNRVIEDWLEKVLVRGF 669
+ +E++L +L S +E+W EKVLV GF
Sbjct: 625 EALEKILGGVWLGRSG--LEEWAEKVLVPGF 653
>gi|449465230|ref|XP_004150331.1| PREDICTED: uncharacterized protein LOC101218254 [Cucumis sativus]
Length = 1055
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 214/486 (44%), Gaps = 83/486 (17%)
Query: 220 PVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSS 279
P + V T+L LG N+ + + ER ++L GC S+ N++ +
Sbjct: 605 PGSPVRTELALG--------RKNDSEILAEETHKERVKDLLGCISS----GPENKVCELR 652
Query: 280 SSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI 339
SS + + D+ ++K L + + EK+ WQ EA S ++ ++ Q + G+ G P+ D+
Sbjct: 653 SSKFIETS---DIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDM 709
Query: 340 WFNFTGPDLCGKRKIAIALAEIIYGGKENFIC-ADLCPQDGEMNNPPKFYHQVVGGDSVQ 398
W F GPD GK+K+A ALAE++ G IC DGE +
Sbjct: 710 WLLFLGPDRVGKKKMATALAELVSGSNPITICLGSKRKSDGE--------------SEIS 755
Query: 399 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 458
RG+T+ D ++ + + SV+ L++ D++D+ V+ S+ +A++ G+ DS+GRE+S+ N
Sbjct: 756 IRGRTVLDRISEAIRRNRFSVIVLDDFDESDLLVRGSIRRAMERGRFTDSHGREISLGNI 815
Query: 459 IFVTASSFVEDARILPSEMKDCK----FSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 514
IF+ ++++ P +MK EEK L R+ KLS
Sbjct: 816 IFILTATWI------PDDMKHLSNGNMLEEEKFA-------------GLARRTWQLKLSV 856
Query: 515 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAE-EDEVL-- 571
SE + + R Q + + R DLN A+ EDE
Sbjct: 857 SEQT--------------VKRRAEWAQGEERCLKPRLESGSAIAFDLNECADAEDEKTDG 902
Query: 572 VLDSDD---DRNSDSSENTK-------SWLQDFFNQRVKIVAFKAFNFDALAEKILKDIN 621
L+S D D ++ NT+ S ++ N + FK +F + I I
Sbjct: 903 SLNSSDVTTDHETEHGLNTRQLSFTTASASREMLNTVDDAIVFKPVDFSPIKHSITSSIK 962
Query: 622 ASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTAN 681
F VG + LE+ +E++ + +L +N +E+W E LV + + + TAN
Sbjct: 963 KKFSSIVGEKMSLELQENAVEKITSGVWLGNTN--VEEWTENFLVPSLKELKARLP-TAN 1019
Query: 682 SIVKLV 687
+ +V
Sbjct: 1020 AFESMV 1025
>gi|449506714|ref|XP_004162827.1| PREDICTED: uncharacterized LOC101218254 [Cucumis sativus]
Length = 1055
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 214/486 (44%), Gaps = 83/486 (17%)
Query: 220 PVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSS 279
P + V T+L LG N+ + + ER ++L GC S+ N++ +
Sbjct: 605 PGSPVRTELALG--------RKNDSEILAEETHKERVKDLLGCISS----GPENKVCELR 652
Query: 280 SSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDI 339
SS + + D+ ++K L + + EK+ WQ EA S ++ ++ Q + G+ G P+ D+
Sbjct: 653 SSKFIETS---DIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDM 709
Query: 340 WFNFTGPDLCGKRKIAIALAEIIYGGKENFIC-ADLCPQDGEMNNPPKFYHQVVGGDSVQ 398
W F GPD GK+K+A ALAE++ G IC DGE +
Sbjct: 710 WLLFLGPDRVGKKKMATALAELVSGSNPITICLGSKRKSDGE--------------SEIS 755
Query: 399 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 458
RG+T+ D ++ + + SV+ L++ D++D+ V+ S+ +A++ G+ DS+GRE+S+ N
Sbjct: 756 IRGRTVLDRISEAIRRNRFSVIVLDDFDESDLLVRGSIRRAMERGRFTDSHGREISLGNI 815
Query: 459 IFVTASSFVEDARILPSEMKDCK----FSEEKIYRAKSRLTQILIEPALVNRSSSQKLSA 514
IF+ ++++ P +MK EEK L R+ KLS
Sbjct: 816 IFILTATWI------PDDMKHLSNGNMLEEEKFA-------------GLARRTWQLKLSV 856
Query: 515 SETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAE-EDEVL-- 571
SE + + R Q + + R DLN A+ EDE
Sbjct: 857 SEQT--------------VKRRAEWAQGEERCLKPRLETGSAIAFDLNECADAEDEKTDG 902
Query: 572 VLDSDD---DRNSDSSENTK-------SWLQDFFNQRVKIVAFKAFNFDALAEKILKDIN 621
L+S D D ++ NT+ S ++ N + FK +F + I I
Sbjct: 903 SLNSSDVTTDHETEHGLNTRQLSFTTASASREMLNTVDDAIVFKPVDFSPIKHSITSSIK 962
Query: 622 ASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTAN 681
F VG + LE+ +E++ + +L +N +E+W E LV + + + TAN
Sbjct: 963 KKFSSIVGEKMSLELQENAVEKITSGVWLGNTN--VEEWTENFLVPSLKELKARLP-TAN 1019
Query: 682 SIVKLV 687
+ +V
Sbjct: 1020 AFESMV 1025
>gi|356562493|ref|XP_003549505.1| PREDICTED: uncharacterized protein LOC100809965 [Glycine max]
Length = 1034
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 188/394 (47%), Gaps = 39/394 (9%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
D ++K L + LTEK+ WQ +A S ++ T+ Q + G+ + D W F GPD
Sbjct: 644 IDADSFKKLLKGLTEKVWWQQDAASAVASTVTQCKLGNGKRRS---KGDTWLLFVGPDRI 700
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK+K+A AL+E+ G N I L + G+ + D+ RGKT D +A
Sbjct: 701 GKKKMAAALSELASGS--NPIIIPLAQRRGDAGD----------SDAPHLRGKTALDRIA 748
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASSFVE 468
+ + PLSV+ LE++D+A++ ++ S+ +A++ G+ PDS+GRE+S+ N +F+ TA+ E
Sbjct: 749 EAIRRNPLSVIVLEDIDEANILLRGSIRRAMEQGRFPDSHGREISLGNVMFILTANWLPE 808
Query: 469 DARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLN 528
D R L +E EEK+ Q+ I S+ ++ S S + L
Sbjct: 809 DFRCLSNE---SLLDEEKLENLAKGGWQLRI-------SAGKRASKRRPSWLSDEDRSLK 858
Query: 529 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 588
RK + + ++ + R D +L + + V +D D +
Sbjct: 859 PRKEVNSGVSFDLNEAAADAAEDDRG-----DGSLNSSDFTV----EHEDNYHDVGGSLS 909
Query: 589 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 648
+ ++ + + FK NFD L I F VG+ +E+ + ++++ +
Sbjct: 910 AVPRELLDSVDDAIVFKPLNFDLLRRNFSSSIAKRFSSVVGNGVSIEVQGEALDKITSGV 969
Query: 649 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANS 682
+L ++ I++W++KVLV F Q K NL +++
Sbjct: 970 WLGQT--TIDEWMDKVLVPCF--HQLKKNLNSST 999
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 31 CQQCSEKCEQEI---IASSKGGFTASIADQCQSVLPSWLQMAEP--DSNKALD-LKTKED 84
C QC + CEQE+ + +K T ++ + LP WLQ A+ D+ K +D + +E
Sbjct: 446 CPQCMQSCEQEVAEMLEETKKSDTELKSEAAKPSLPQWLQNAKTNNDNGKVMDQAQNQEV 505
Query: 85 GLALRSK-ITKKWDDICQSLH-RTQSLQVGSQ--FPT-----------VVGFQFLQDKKE 129
+ R+K I KKW D C SLH + L V ++ PT ++G QF Q K
Sbjct: 506 NVKKRTKEIQKKWHDSCLSLHPKFHQLNVSTETLVPTPLSMTGLYNMNLLGRQF-QPKIL 564
Query: 130 NANNSGSSTNASVN 143
N G+S S N
Sbjct: 565 RNKNLGTSLQLSSN 578
>gi|356547789|ref|XP_003542291.1| PREDICTED: uncharacterized protein LOC100785122 [Glycine max]
Length = 1036
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 62/405 (15%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
D ++K L + LTEK+ WQ +A S ++ T+ Q + G+ + D W F GPD
Sbjct: 647 LDADSFKKLLKGLTEKVWWQQDAASAVATTVTQCKLGNGKRRS---KGDTWLLFVGPDRI 703
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQ--DGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK+K+A AL+E++ G N I L + DG+ + P RGKT D
Sbjct: 704 GKKKMAAALSELV-SGSTNPIIIPLAQRRADGDSDAP-------------HLRGKTALDR 749
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASSF 466
+A + + PLSV+ LE++D+A++ ++ S+ +A++ G+ PDS+GRE+S+ N +F+ TA+
Sbjct: 750 IAEAIRRNPLSVIVLEDIDEANILLRGSIRRAMEQGRFPDSHGREISLGNVMFILTANWL 809
Query: 467 VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKL 526
ED R L + EEK+ Q+ I V + +S++ + + E
Sbjct: 810 PEDFRCLSN---GSPLDEEKLENLAKGGWQLRIS---VGKRASKRRPSWLSDE------- 856
Query: 527 LNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDE----VLVLDSDD----- 577
R+ P++ S + + DLN A++ E L+S D
Sbjct: 857 -------DRSLKPRKEVNSGL----------SFDLNEAADDAEDGRGDGSLNSSDFTVEH 899
Query: 578 -DRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEI 636
D N D + + ++ + + FK NFD L I F VG+ +E+
Sbjct: 900 EDNNHDVGGSLSAVPRELLDSVDDAIVFKPLNFDLLRRNFSSSIIKRFSAVVGNGVSIEV 959
Query: 637 DRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNLTAN 681
+ ++++ + +L ++ I++W++K LV F ++ N T +
Sbjct: 960 QGEALDKITSGVWLGQT--TIDEWMDKALVPSFHQLKKNLNSTTH 1002
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 31 CQQCSEKCEQEI---IASSKGGFTASIADQCQSVLPSWLQMAEP--DSNKALD-LKTKED 84
C QC + CEQE+ + ++ T ++ + LP WLQ A+ D+ K +D + +E
Sbjct: 449 CPQCMQSCEQEVAEMLKETEKSDTELKSEAAKPSLPQWLQNAKTNKDNGKVMDQAQNQEV 508
Query: 85 GLALRSK-ITKKWDDICQSLH 104
+ R++ I KKW D C SLH
Sbjct: 509 NVKKRTQEIQKKWHDSCLSLH 529
>gi|242078685|ref|XP_002444111.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
gi|241940461|gb|EES13606.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
Length = 1051
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 208/473 (43%), Gaps = 101/473 (21%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 274
RKSP P + V TDL LG L +P + KD E E G + Q
Sbjct: 609 RKSP-PGSPVKTDLALGPL---------DPGATVEKDQKENYTE----------GLTAMQ 648
Query: 275 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 334
A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q RTG
Sbjct: 649 KAKIAGIS--------DIESFKRLLKVLTEKVSWQSDAASAIAAVVIQCRTGSGKRRNIG 700
Query: 335 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGG 394
R DIW F GPD GKRK+A AL+E++ + I GG
Sbjct: 701 TRGDIWLLFVGPDQAGKRKMANALSELMVNAQPVVIN--------------------FGG 740
Query: 395 DS-------VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPD 447
DS F GKT D V + + P SV+ LE +D+ DV V+ + +A++TG+LPD
Sbjct: 741 DSRLGKDGNAGFWGKTSLDRVTEAVRQNPCSVIVLEGIDQVDVVVRGKIKRAMETGRLPD 800
Query: 448 SYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRS 507
S GREVS+ N +FV +++ LP E++ KF E + + + R+ ++ S
Sbjct: 801 SRGREVSLGNVVFVLTTNW------LPEELRRPKF--ETLLQDEGRMFEVA--------S 844
Query: 508 SSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEE 567
S+ +L S + +++ ++ + + P +++ K P +LDLNL
Sbjct: 845 SNWQLELS-----IGDKQIKHRADWLCDDARP-----AKVAKELSGGPGLSLDLNLAVGA 894
Query: 568 DEVLVLDSDDDRNSD----SSENTKSWLQ----------DFFNQRVKIVAFKAFNFDALA 613
+ D++ RNS + K L D N + F+ +F
Sbjct: 895 LD----DTEGSRNSSDLSVEQDQEKGHLAVKCSTPDPDCDLLNLVDDAIVFRPVDFAPFR 950
Query: 614 EKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 666
+ + I+A F + S ID ++ + + +L++ +EDW EKVL+
Sbjct: 951 KTVTDCISAKFDSVIRSSNSFRIDEDAVDHMAGSIWLTDEK--LEDWAEKVLM 1001
>gi|125560773|gb|EAZ06221.1| hypothetical protein OsI_28463 [Oryza sativa Indica Group]
Length = 682
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 219/498 (43%), Gaps = 89/498 (17%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 273
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 235 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 274
Query: 274 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 275 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 326
Query: 334 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 393
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 327 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 377
Query: 394 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 453
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 378 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 437
Query: 454 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 438 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 481
Query: 514 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 573
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 482 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 526
Query: 574 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 618
D + ++ S E K L D + F+ +F + +
Sbjct: 527 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 586
Query: 619 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF--LDAQEKY 676
I+A F +GS ID ++ ++ + +L++ IEDW EKVL L K+
Sbjct: 587 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVKH 644
Query: 677 NLTANSIVKLVACEGHFL 694
+ + SI++L A L
Sbjct: 645 D-SGRSIIRLTAVAAKAL 661
>gi|115475559|ref|NP_001061376.1| Os08g0250900 [Oryza sativa Japonica Group]
gi|113623345|dbj|BAF23290.1| Os08g0250900, partial [Oryza sativa Japonica Group]
Length = 972
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 207/467 (44%), Gaps = 86/467 (18%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 273
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 525 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 564
Query: 274 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 565 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 616
Query: 334 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 393
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 617 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 667
Query: 394 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 453
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 668 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 727
Query: 454 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 728 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 771
Query: 514 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 573
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 772 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 816
Query: 574 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 618
D + ++ S E K L D + F+ +F + +
Sbjct: 817 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 876
Query: 619 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVL 665
I+A F +GS ID ++ ++ + +L++ IEDW EKVL
Sbjct: 877 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVL 921
>gi|40253563|dbj|BAD05509.1| 101 kDa heat shock protein; HSP101-like protein [Oryza sativa
Japonica Group]
Length = 1041
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 207/467 (44%), Gaps = 86/467 (18%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 273
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 594 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 633
Query: 274 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 634 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 685
Query: 334 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 393
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 686 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 736
Query: 394 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 453
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 737 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 796
Query: 454 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 797 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 840
Query: 514 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 573
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 841 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 885
Query: 574 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 618
D + ++ S E K L D + F+ +F + +
Sbjct: 886 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 945
Query: 619 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVL 665
I+A F +GS ID ++ ++ + +L++ IEDW EKVL
Sbjct: 946 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVL 990
>gi|125602736|gb|EAZ42061.1| hypothetical protein OsJ_26621 [Oryza sativa Japonica Group]
Length = 733
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 219/498 (43%), Gaps = 89/498 (17%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAP-TSNEPKEPISKDLTERSQELSGCCSATVNGSISN 273
RKSP P + V TDL L L G+ P NE KE + G +
Sbjct: 286 RKSP-PASPVKTDLVLCRLDPGTNPAVENEQKE-------------------SCEGLTAL 325
Query: 274 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
Q A+ + S D+ ++K L + LTEK+ WQ +A S I+ + Q R+G
Sbjct: 326 QKAKIAGIS--------DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNV 377
Query: 334 SPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG 393
R D+W F GPD GKRK+ AL+E++ + + + G + N
Sbjct: 378 GTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGN---------D 428
Query: 394 GDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREV 453
G ++ F GKT D V + + P SV+ LE +D+ DV V + +A++TG+LPDS GREV
Sbjct: 429 GPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREV 488
Query: 454 SVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
S+ N IFV +++V P E+K E + R + R+ L + SSS +L
Sbjct: 489 SLGNVIFVLTTNWV------PEELKGSNV--ETLLRGEERM--------LESTSSSWQLE 532
Query: 514 ASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVL 573
S + +++ ++ + + P +++ K S +LDLNL V L
Sbjct: 533 LS-----IGDKQVKHRADWLCDDVRP-----AKLAKELSSSHGLSLDLNL-----AVGAL 577
Query: 574 DSDDDRNSDS-----SENTKSWL----------QDFFNQRVKIVAFKAFNFDALAEKILK 618
D + ++ S E K L D + F+ +F + +
Sbjct: 578 DDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTD 637
Query: 619 DINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGF--LDAQEKY 676
I+A F +GS ID ++ ++ + +L++ IEDW EKVL L K+
Sbjct: 638 CISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVKH 695
Query: 677 NLTANSIVKLVACEGHFL 694
+ + SI++L A L
Sbjct: 696 D-SGRSIIRLTAVAAKAL 712
>gi|168026262|ref|XP_001765651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683077|gb|EDQ69490.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1118
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 216/446 (48%), Gaps = 54/446 (12%)
Query: 296 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 355
K L++ L +++ WQ A++ I+ T+ + R+G GA+ + D W GPD K IA
Sbjct: 679 KGLYKGLMQRVPWQAAAVAGIATTVMKCRSGMGSFRGATAKTDTWLLLLGPDPVAKVAIA 738
Query: 356 IALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS-VQFRGKTLADYVAWELLK 414
ALAE+++GG+ + + DG +P + G DS +++RGKT D +A +
Sbjct: 739 KALAEMVFGGERSLLHIGFA--DG---SPARLE----GDDSGMRYRGKTPLDRLAEAVRL 789
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ LE++DKA +N++ +A++ GKL DS REVS+SN+I V +S V P
Sbjct: 790 KPSSVILLEDIDKATSVFKNNVVRAMERGKLADSSMREVSLSNSIIVMTTS-VGSVDCEP 848
Query: 475 SE-MKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL---SASETSEGMSHQKLLNKR 530
E + FSE K+ A + +I + + SSS+K+ SA+ + H + ++
Sbjct: 849 VERLGALSFSEAKL--AALKRAEICVR---IKHSSSEKIVFKSANNKIVVVDHGE-EEQK 902
Query: 531 KLIGRNDNP---------QQHDT---SEM-----VKRAHRSPTR--NLDLNLPAEEDE-- 569
K + +P ++ D+ E+ KR R NLDLNL E++
Sbjct: 903 KFVETTSSPLEVPLWVTKRKQDSFLQGELRSKFDAKRTKSGQGRFLNLDLNLSTGENKGC 962
Query: 570 ---------VLVLDSDDDRNSDSSENTKSWLQDFFNQRVKI-VAFKAFNFDALAEKILKD 619
V D+++ + E+ + L D F V F ++F+ LA +IL
Sbjct: 963 WTGETDDHCVTDFDAEEVKRKKVLEHVRLMLTDKFCALPDYAVGFDPYDFNGLATEILNT 1022
Query: 620 INASFRKTVGSECLLEIDRKVMEQLLAAAY-LSESNRVIEDWLEKVLVRGFLDAQEKYNL 678
++ SF SE +E+D +++E L++ + + + + W++ V + + +
Sbjct: 1023 LSKSFEDHSPSEAGVEVDLRLLEYLMSCVWKIPDGRQKFNAWVDDVFSKSISRSLVDIST 1082
Query: 679 TANSIVKLVACEGHFLEELTPGVCLP 704
+V+L+A +++ GV LP
Sbjct: 1083 AGGPVVELIAGLS-VVKDAFEGVALP 1107
>gi|357479855|ref|XP_003610213.1| Chaperone protein clpB [Medicago truncatula]
gi|355511268|gb|AES92410.1| Chaperone protein clpB [Medicago truncatula]
Length = 1025
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 167/704 (23%), Positives = 285/704 (40%), Gaps = 164/704 (23%)
Query: 1 MESFVPFGGFFPTPSEFKNPLGGLCQNVSR--------CQQCSEKCEQEI---IASSKGG 49
+ES P PTP PL +NV C QC CEQEI + ++
Sbjct: 420 LESLSPLKTLTPTPI---TPLTRASENVDPAAAAAPTCCPQCMRSCEQEIADMLKETEKS 476
Query: 50 FTASIADQCQSVLPSWLQMAEP--DSNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQ 107
+ D + LP WLQ A D+ K +D + + +G + K+ +I + H
Sbjct: 477 DSELKPDATRPPLPQWLQNARTNNDNAKVMD-QAQSNGQ--EGNVKKRTQEIQKKWH--- 530
Query: 108 SLQVGSQFPTVVGFQFLQDKKENANNSGSSTNASVNGGSYVNVYSGIPIDSENVSASRSV 167
S +N++ +NVS R V
Sbjct: 531 -------------------------------------DSCLNLHPKF--HQQNVSTERIV 551
Query: 168 FPFHTVSGAKNDSLLSKLREKSSNADLDSGGSRSPCCLSNSSVD---DGSRKSPTPVTS- 223
+++ N +LL + + + + G C L SS+ S + +P S
Sbjct: 552 PTPFSMTNLYNVNLLGRQFQPKVQPNKNLG-----CSLQLSSIPIPIQQSEHTASPRKST 606
Query: 224 VTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSC 283
VTT+L LG + P+ P+E + + + LS + S +L
Sbjct: 607 VTTELVLG----QTKPSDTIPEESHRERINDFLSSLSSESQDKFDELHSKKL-------- 654
Query: 284 PDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNF 343
FD ++K L + LTEK+ WQ +A S I+ + Q + G
Sbjct: 655 ------FDTDSFKRLLKTLTEKVWWQQDAASAIATAVTQCKLG----------------- 691
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS--VQFRG 401
PD GK+++A AL+E++ G N I L + G+ GDS QFRG
Sbjct: 692 --PDRIGKKRMAAALSELVSGS--NPIVISLAQRRGD-------------GDSNAHQFRG 734
Query: 402 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 461
KT+ D + + + P SV+ LE++D+A+ ++ ++ +A++ G+ PDS+GRE+S+ N +F+
Sbjct: 735 KTVLDRIVETIRRNPHSVIMLEDIDEANTLLRGNIKRAMEQGRFPDSHGREISLGNVMFI 794
Query: 462 TASSFV-EDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEG 520
S+++ ED L + +EK+ S Q+ + S ++K+S S
Sbjct: 795 LTSNWLPEDLSYLSN---GAPLDDEKLENLASGGWQLRL-------SVTKKVSKRRPSWL 844
Query: 521 MSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPA--EEDEVLVLDSDDD 578
+ ++ L RK + + DLN A EED + D
Sbjct: 845 SNEERSLKPRKELNLG--------------------LSFDLNEAADVEEDRADGSHNSSD 884
Query: 579 RNSDSSEN-----TKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECL 633
D EN + S ++ + + FK NFD + + I F VG+
Sbjct: 885 FTVDHEENNHNGGSPSKPRELLDSVDDAIVFKPLNFDLIRQNFSASIAKRFSAVVGNGIS 944
Query: 634 LEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYN 677
+E+ + ++++ + +L ++ I++W+EKVLV F + YN
Sbjct: 945 IEVQEEALDKITSGVWLGQT--TIDEWMEKVLVPSFHQLNKSYN 986
>gi|15242850|ref|NP_200579.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|9759268|dbj|BAB09589.1| 101 kDa heat shock protein; HSP101-like protein [Arabidopsis
thaliana]
gi|332009558|gb|AED96941.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 990
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 189/394 (47%), Gaps = 61/394 (15%)
Query: 285 DLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFT 344
+L D+ +K L + +TEK+ WQ++A + ++ T++Q + G+ G + D+W F+
Sbjct: 599 NLGNSLDIDLFKKLLKGMTEKVWWQNDAAAAVAATVSQCKLGNGKRRGVLSKGDVWLLFS 658
Query: 345 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 404
GPD GKRK+ AL+ ++YG I Q G Q G + FRGKT
Sbjct: 659 GPDRVGKRKMVSALSSLVYGTNPIMI------QLGS--------RQDAGDGNSSFRGKTA 704
Query: 405 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 464
D +A + + P SV+ LE++D+AD+ V+ S+ +A+ G++ DS+GRE+S+ N IFV +
Sbjct: 705 LDKIAETVKRSPFSVILLEDIDEADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMTA 764
Query: 465 SFVEDARILPSEMKDCKFSEEK--IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 522
S+ F+ K +++L + E + +K S S
Sbjct: 765 SW--------------HFAGTKTSFLDNEAKLRDLASESWRLRLCMREKFGKRRASWLCS 810
Query: 523 HQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEV------LVLDSD 576
++ L K P++ S + + DLN A+ D+ L D+D
Sbjct: 811 DEERLTK---------PKKEHGSGL----------SFDLNQAADTDDGSHNTSDLTTDND 851
Query: 577 DDRNSDSSENTKSWLQDFFNQRVK----IVAFKAFNFDALAEKILKDINASFRKTVGSEC 632
D S + + + F+ V VAF+A +F A+ +I + ++ F +G
Sbjct: 852 QDEQGFSGKLSLQCVPFAFHDMVSRVDDAVAFRAVDFAAVRRRITETLSERFETIIGESL 911
Query: 633 LLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 666
+E++ + ++++L+ +L ++ +E+W+EK +V
Sbjct: 912 SVEVEEEALQRILSGVWLGQTE--LEEWIEKAIV 943
>gi|224142299|ref|XP_002324496.1| predicted protein [Populus trichocarpa]
gi|222865930|gb|EEF03061.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 34/381 (8%)
Query: 308 WQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKE 367
WQ +A S ++ T+ Q + GH + DIW FTGPD GK+K+A AL+E++ G
Sbjct: 169 WQRDAASAVATTVTQCKLGHGKGRSTGSKGDIWLLFTGPDRAGKKKMASALSELVCGANP 228
Query: 368 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 427
+C +DGE V FRGKT+ D +A + + P SV+ LE++D+
Sbjct: 229 IMVCLGSWREDGE--------------SEVSFRGKTVLDRIAEAVRRNPFSVIILEDIDE 274
Query: 428 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKI 487
AD+ V+ S+ +A++ G++ DS GRE+S+ N IF+ ++ + D + KF I
Sbjct: 275 ADMLVRGSIKRAMERGRIADSLGREISLGNVIFILTANRLPD---------NLKFLSNGI 325
Query: 488 YRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEM 547
+ +L + + + S++ + + ++ RK +G ++ +E
Sbjct: 326 SLDEKKLASLASGGWQLRLTLSERTAKRRANWLHDEERSAKPRKDLGTALAFDLNEAAET 385
Query: 548 VKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAF 607
+ DL + E+++ L N + T S ++ N + FK
Sbjct: 386 GDDKADGSHNSSDLTVDHEDEDAL-------NNRLLTSATSSVSKELLNLVDDHIVFKHA 438
Query: 608 NFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLVR 667
+F ++ I I F ++ +EI + +E+++ +L+ + +E+W + VLV
Sbjct: 439 DFSSIRHDISNSITKKFSTIFSNQMQIEIQDEALEKIVGGIWLARTG--LEEWTDNVLVP 496
Query: 668 GFLDAQEKYNLTAN--SIVKL 686
+ + + AN +I++L
Sbjct: 497 SLRQLKLRLPICANESTIIRL 517
>gi|168010434|ref|XP_001757909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690786|gb|EDQ77151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1030
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 203/442 (45%), Gaps = 53/442 (11%)
Query: 296 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 355
K + + L EK+ WQ +AIS IS I +TG + G + + W GPD GKR IA
Sbjct: 601 KYVHKGLMEKVVWQGKAISTISTFIVNAQTGRGELRGGAAKAGTWLLLLGPDQVGKRLIA 660
Query: 356 IALAEIIYG-GKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
ALAE++ G + DL ++ +V D +Q+RG+T D +A L
Sbjct: 661 GALAELVVGVAAKPIYFGDL--------GYSRWGRKVEEIDGMQYRGRTAVDSIADALRA 712
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KPLSV+ LE++D+A ++ L +A+ TGK DS G VSV N+I + S ++ +
Sbjct: 713 KPLSVLLLEDIDQAVSVIRTKLMRAMVTGKFSDSNGGHVSVGNSIIIMTSRLGANSNL-- 770
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEP--------------ALVN---RSSSQKLSASET 517
+ K+ FSE ++ +L++P ++V R+S+ + A+
Sbjct: 771 GKGKENIFSEGRLASMHGARMSLLLQPPREKEIVLQGDMDISVVRDTIRTSALENPANPM 830
Query: 518 SEGMSHQKLLN---KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLD 574
S GM ++ + R L+G +V LDLNL AEE+E ++ +
Sbjct: 831 SGGMVLKRKASGFLSRALLGVKRKKVSTPFGRIVA---------LDLNLSAEENEAVLAE 881
Query: 575 S-----DDDRNSDSSENTKSWLQDFFNQRV-----KIVAFKAFNFDALAEKILKDINASF 624
+ + N S+ +Q+ + + + V F+ F+ LA IL ++ +
Sbjct: 882 TVTSHEEIATNIGVSDPVLRAVQEVLSPKFCSLVDETVMFEPFDLMGLANWILLQLSRAC 941
Query: 625 RKTVGSECL-LEIDRKVMEQLLAAAYLSESNR-VIEDWLEKVLVRGFLDAQEKYNLTANS 682
V C +E+D +++E +++ + + R E W+E L +++ +
Sbjct: 942 SGLVPKFCTRIEVDFQILEHIVSTTWRTPGGRQAFEGWVEDKLKSCLKAVTANSSVSEDR 1001
Query: 683 IVKLVACEGHFLEELTPGVCLP 704
+++ A EG F +EL G LP
Sbjct: 1002 VLRF-AYEGCFSKELCLGSELP 1022
>gi|413916916|gb|AFW56848.1| hypothetical protein ZEAMMB73_979207 [Zea mays]
Length = 1023
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 208/469 (44%), Gaps = 90/469 (19%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 274
RKSP + V TDL LG + G A N+ KE ++ LT S Q
Sbjct: 578 RKSPL-GSPVKTDLALGPMDPG-ATVENDQKENYTEGLT------------------SMQ 617
Query: 275 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 334
A+ + S D+ ++K L + LT+K+ WQ +A S I+ + Q RTG
Sbjct: 618 KAKIAGIS--------DIESFKRLLKVLTQKVSWQSDAASAIAAVVIQCRTGSGKRRNIG 669
Query: 335 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKE---NFICADLCPQDGEMNNPPKFYHQV 391
R DIW F GPD GKRK+ AL+E++ + NF +DG NP
Sbjct: 670 TRGDIWLLFVGPDQAGKRKMVNALSELMVNAQPVVVNFGGDSRLSKDGNGLNP------- 722
Query: 392 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 451
F GKT D V + + P SV+ LE +D+ D V+ + +A++TG+L DS GR
Sbjct: 723 ------GFWGKTSLDRVTEAVRQNPCSVIILEGIDQVDAVVRGKIKRAMETGRLVDSRGR 776
Query: 452 EVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQK 511
EVS+ N IFV +++ LP E++ KF E + + + R+ ++ SS+ +
Sbjct: 777 EVSLGNVIFVLTTNW------LPEELRRPKF--ETLLQDEGRMLEVA--------SSNWQ 820
Query: 512 LSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVL 571
L S + + H + + + P +++ K +LDLNL +
Sbjct: 821 LELSIEDKQVKH-----RADWLCDDARP-----AKVAKELSGGQGLSLDLNLAVGALD-- 868
Query: 572 VLDSDDDRNSD----SSENTKSWLQ----------DFFNQRVKIVAFKAFNFDALAEKIL 617
D+D RNS E+ K L D N + F+ +F + +
Sbjct: 869 --DTDGSRNSSDLSVEQEHEKGHLAVKCSTPAPDYDLLNLVDDAIVFRPVDFAPFRKTVT 926
Query: 618 KDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVLV 666
I+A F +GS ID ++++ + +L++ +EDW EKVL+
Sbjct: 927 DCISAKFDSVIGSCNSFRIDEDAVDRMAGSIWLTDEK--LEDWAEKVLM 973
>gi|388498144|gb|AFK37138.1| unknown [Lotus japonicus]
Length = 150
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
Query: 577 DDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEI 636
D N EN+++WL DF +Q V FK FNFD+LAE++++ + F++T GSE LLEI
Sbjct: 14 DCENQSMVENSEAWLSDFCDQIDGEVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEI 73
Query: 637 DRKVMEQLLAAAYLSESNRVIEDWLEKVLVRGFLDAQEKYNL---TANSIVKLVACEGHF 693
D +VM Q+LAAA+LS+ + +EDW+E V+ R F +A++KY+ A ++KLV CE F
Sbjct: 74 DYEVMAQILAAAWLSDKKKSVEDWIEHVVGRSFAEARQKYHHHHPAAEYVMKLVNCESIF 133
Query: 694 LEELTPGVCLPPKLVLN 710
+EE GVCLP ++ LN
Sbjct: 134 VEEQALGVCLPARINLN 150
>gi|413922132|gb|AFW62064.1| hypothetical protein ZEAMMB73_199434 [Zea mays]
Length = 1028
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 199/470 (42%), Gaps = 92/470 (19%)
Query: 215 RKSPTPVTSVTTDLGLGLLGIGSAPTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQ 274
RKSP P + V TDL LG L +P + KD E E G + Q
Sbjct: 577 RKSP-PGSPVKTDLALGPL---------DPDATMEKDQKENYTE----------GLTAMQ 616
Query: 275 LAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGAS 334
A+ + S D+ ++K L +ALTEK+ WQ +A S I+ + Q RT
Sbjct: 617 KAKIAGIS--------DIESFKRLLKALTEKVSWQSDAASAIAAAVIQCRTASGKRRNIG 668
Query: 335 PRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKE---NFICADLCPQDGEMNNPPKFYHQV 391
R DIW F GPD GKRK+A AL+E + + NF +DG P F+
Sbjct: 669 TRGDIWLLFVGPDQAGKRKMANALSEQMVNAEPVVINFGGDSRWGKDGNGRPNPGFW--- 725
Query: 392 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 451
GKT D V + + P SV+ LE +D+ D V+ +++A+ TG+LPDS GR
Sbjct: 726 ---------GKTSLDRVTEAVRQNPCSVIVLEGIDQVDAVVRGKINRAMDTGRLPDSRGR 776
Query: 452 EVSVSNAIFVTASSFVEDARILPSEMKDCKF-----SEEKIYRAKSRLTQILIEPA---- 502
EVS+ N IFV + + LP E++ KF E K+ A Q+ +
Sbjct: 777 EVSLGNVIFVLTTDW------LPEELRRPKFDTPLQDEGKMLEAAHSDWQLELSIGDKQQ 830
Query: 503 -------LVNRSSSQKLSASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSP 555
L N + K+ A E S G H L+ +G +D+ + S
Sbjct: 831 LKHQADWLCNDARPAKV-ARELSGG--HGLSLDLNLAVGASDDTEGSRNSS--------- 878
Query: 556 TRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTKSWLQDFFNQRVKIVAFKAFNFDALAEK 615
DL++ E+++ V DS D N + F+ +F +
Sbjct: 879 ----DLSVEQEQEKGHVAVKCSTPAPDS---------DLLNLVDDAIVFRPVDFAPFRKA 925
Query: 616 ILKDINASFRKTVGSECLLEIDRKVMEQLLAAAYLSESNRVIEDWLEKVL 665
+ ++A F +D ++++ A+ +L++ +EDW E+VL
Sbjct: 926 VTDCVSAKFDSVTRGSSSFRVDEDAVDRMAASVWLTDEK--LEDWAEEVL 973
>gi|15234709|ref|NP_194764.1| heat shock-related protein [Arabidopsis thaliana]
gi|7269935|emb|CAB81028.1| putative protein [Arabidopsis thaliana]
gi|332660355|gb|AEE85755.1| heat shock-related protein [Arabidopsis thaliana]
Length = 924
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 182/398 (45%), Gaps = 63/398 (15%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
FD+ +K L + L + + WQ +A S ++ I + + G+ G DIW FTGPD
Sbjct: 565 FDIDLFKKLLKGLAKSVWWQHDAASSVAAAITECKHGNGKSKG-----DIWLMFTGPDRA 619
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK K+A AL++++ G + P + + + D + RGKT D A
Sbjct: 620 GKSKMASALSDLVSGSQ---------PITISLGSSSRM------DDGLNIRGKTALDRFA 664
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TASSFVE 468
+ + P +V+ LE++D+AD+ ++N++ AI+ G++ DSYGREVS+ N I + TA+S +
Sbjct: 665 EAVRRNPFAVIVLEDIDEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTANSSLG 724
Query: 469 DARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLN 528
A+ + S E ++ +LVN+ +LS +S K
Sbjct: 725 SAKNVAS------IDETRL-------------ESLVNKGWELRLSVCNSS------KTRK 759
Query: 529 KRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLVLDSDDDRNSDSSENTK 588
++ +DN Q E+ DLN AE D S D E+
Sbjct: 760 RKPNWLYSDNDQTKQRKEIC----------FDLNEAAEFD-----SSSDVTVEHDQEDNG 804
Query: 589 SWLQDFFNQRVKIVAFKAFNFDALAEKILKDINASFRKTVGSECLLEIDRKVMEQLLAAA 648
+ + + F+ +FD++ K + + F + +EI+ +E++ A
Sbjct: 805 NLVHKLVGLVDDAILFRPVDFDSIKSKTAESLKKRFSNGLADGLTVEIEDDALERIAGAI 864
Query: 649 YLSESNRVIEDWLEKVLVRGFLDAQEKYNLTANSIVKL 686
+LS+ + +E+WLE+ + + + + + +S++++
Sbjct: 865 WLSKIS--LEEWLEEAMGSSLNSVKSRVSSSEDSVIRI 900
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 18/100 (18%)
Query: 12 PTPSEFKNPLGGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEP 71
PT S F+ P+ + S C +C + E ++ K + +SVLP WLQ A+
Sbjct: 423 PTRS-FQIPMSKM----SCCSRCLQSYENDVAKVEK-----DLTGDNRSVLPQWLQNAKA 472
Query: 72 --DSNKALDLKTKEDGLALRSKITKKWDDICQSLHRTQSL 109
D +K L TK+ + ++ KKW+D+C LH QS+
Sbjct: 473 NDDGDKKL---TKDQQIV---ELQKKWNDLCLRLHPNQSV 506
>gi|359492653|ref|XP_003634451.1| PREDICTED: GTP-binding protein YPT53-like [Vitis vinifera]
Length = 302
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 70/115 (60%), Gaps = 27/115 (23%)
Query: 295 WKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKI 354
+KTLFRALTE+IDWQ EAISVIS+TIA R G+E HGASP+ DIWFNF GPD ++KI
Sbjct: 30 FKTLFRALTERIDWQPEAISVISETIACCRLGNEKRHGASPKEDIWFNFVGPDRFNRKKI 89
Query: 355 AIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
+ALAEI EMN G V+FRGK + +Y+A
Sbjct: 90 DVALAEIF----------------QEMN-----------GYKVRFRGKNMVNYIA 117
>gi|125583956|gb|EAZ24887.1| hypothetical protein OsJ_08665 [Oryza sativa Japonica Group]
Length = 966
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 188/451 (41%), Gaps = 102/451 (22%)
Query: 278 SSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRR 337
+S++S P C D K L + LTE + WQ EA + ++ I + R+G G P R
Sbjct: 558 ASTASRPPAYCDTDE---KLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTR 614
Query: 338 -DIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 396
D W F+G D+ GK K+A AL+ ++G N + L GE
Sbjct: 615 ADTWVLFSGHDVAGKTKMAEALSMSVFG--TNAVALRLAGNGGE--------------PI 658
Query: 397 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH--VQNSLSKAIQTGKLPDSYGREVS 454
RG+T D VA + PL V+ L+ D D VQ S+ +A+++G+L DS GR+V+
Sbjct: 659 ASCRGRTALDCVADAIRANPLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVA 718
Query: 455 VSNAIFVTASSFVEDARILPSEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL 512
+ AIFV S ++D R + + D ++ E R +R R Q L
Sbjct: 719 LGEAIFVVMS--LDDTRRCQEDHQFTDSPWNLELRVRNNAR----------KRRPEPQPL 766
Query: 513 SASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLV 572
+ R+L R D+P H LDLNL ED
Sbjct: 767 DGA------------GDRRLKPRKDSPPLH----------------LDLNLSMCEDHT-- 796
Query: 573 LDSDDDRNSDSSENTKSWL-----QDF---------------FNQRVK----IVAFKAFN 608
DDD + S N+ S L Q++ F++ K V FK +
Sbjct: 797 --DDDDSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVD 854
Query: 609 FDALAEKILKDINASFRKTVGSECLL--EIDRKVMEQLLAAAYLS-ESNRVIEDWLEKVL 665
F L + ++A G+ L +D V+++L AA+ + ES +E W ++VL
Sbjct: 855 FGPLKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVL 914
Query: 666 VRGFLDAQEKYNLTANSI-----VKLVACEG 691
Q K +L+AN + V L A EG
Sbjct: 915 CPTI--RQLKRSLSANDVDGATTVSLSAVEG 943
>gi|115449139|ref|NP_001048349.1| Os02g0788600 [Oryza sativa Japonica Group]
gi|47497764|dbj|BAD19864.1| 101 kDa heat shock protein-like [Oryza sativa Japonica Group]
gi|113537880|dbj|BAF10263.1| Os02g0788600 [Oryza sativa Japonica Group]
Length = 965
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 188/451 (41%), Gaps = 102/451 (22%)
Query: 278 SSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRR 337
+S++S P C D K L + LTE + WQ EA + ++ I + R+G G P R
Sbjct: 557 ASTASRPPAYCDTDE---KLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTR 613
Query: 338 -DIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 396
D W F+G D+ GK K+A AL+ ++G N + L GE
Sbjct: 614 ADTWVLFSGHDVAGKTKMAEALSMSVFG--TNAVALRLAGNGGE--------------PI 657
Query: 397 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH--VQNSLSKAIQTGKLPDSYGREVS 454
RG+T D VA + PL V+ L+ D D VQ S+ +A+++G+L DS GR+V+
Sbjct: 658 ASCRGRTALDCVADAIRANPLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVA 717
Query: 455 VSNAIFVTASSFVEDARILPSEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL 512
+ AIFV S ++D R + + D ++ E R +R R Q L
Sbjct: 718 LGEAIFVVMS--LDDTRRCQEDHQFTDSPWNLELRVRNNAR----------KRRPEPQPL 765
Query: 513 SASETSEGMSHQKLLNKRKLIGRNDNPQQHDTSEMVKRAHRSPTRNLDLNLPAEEDEVLV 572
+ R+L R D+P H LDLNL ED
Sbjct: 766 DGA------------GDRRLKPRKDSPPLH----------------LDLNLSMCEDHT-- 795
Query: 573 LDSDDDRNSDSSENTKSWL-----QDF---------------FNQRVK----IVAFKAFN 608
DDD + S N+ S L Q++ F++ K V FK +
Sbjct: 796 --DDDDSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVD 853
Query: 609 FDALAEKILKDINASFRKTVGSECLL--EIDRKVMEQLLAAAYLS-ESNRVIEDWLEKVL 665
F L + ++A G+ L +D V+++L AA+ + ES +E W ++VL
Sbjct: 854 FGPLKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVL 913
Query: 666 VRGFLDAQEKYNLTANSI-----VKLVACEG 691
Q K +L+AN + V L A EG
Sbjct: 914 CPTI--RQLKRSLSANDVDGATTVSLSAVEG 942
>gi|242066778|ref|XP_002454678.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
gi|241934509|gb|EES07654.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
Length = 955
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 21/201 (10%)
Query: 268 NGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH 327
G++ LA +++ P C+ D K L R LTE + WQ EA + ++ TIA+ R+G
Sbjct: 532 RGAVDTDLALGLAAARP--ACETDD---KLLVRRLTEAVRWQPEAAAAVACTIAKARSGV 586
Query: 328 EDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC-PQDGEMNNPPK 386
G + D W F GPD+ GKR +A AL++ ++G + L PQ G+
Sbjct: 587 ARRRGKA-DVDAWVVFAGPDVAGKRSMAEALSKSVFG--TGAVTVRLSWPQAGDD----- 638
Query: 387 FYHQVVGGDSV-QFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKL 445
GG+SV RG+T D +A + P VV L+ VD AD V+ S+ +AI++G+L
Sbjct: 639 ------GGESVVSCRGQTALDRMAEAIRANPFRVVVLDGVDHADSVVRGSILRAIESGRL 692
Query: 446 PDSYGREVSVSNAIFVTASSF 466
DS+GR+V++ IFV S +
Sbjct: 693 SDSHGRDVALGTNIFVVMSQW 713
>gi|413939265|gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]
Length = 953
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 94/173 (54%), Gaps = 15/173 (8%)
Query: 296 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIA 355
K L R LTE + WQ EA + ++ TIA+ R+ + D W F GPD+ GKR +A
Sbjct: 556 KLLVRRLTEAVRWQPEAAAAVASTIAKARSSESRRRRTTAGVDAWIVFAGPDVAGKRSMA 615
Query: 356 IALAEIIYGGKENFICADL-CPQDGEMNNPPKFYHQVVGGDS-VQFRGKTLADYVAWELL 413
AL++ ++G + L PQ G+ GG+S V RG+T D +A +
Sbjct: 616 EALSKSVFG--TGAVTLRLGWPQAGDD-----------GGESVVSCRGQTALDRMAEAIR 662
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P VV L+ VD AD V S+ +A+++G+L DS+GR+V++ N IFV S +
Sbjct: 663 ANPFRVVVLDGVDHADSVVHASILRAVESGRLSDSHGRDVALGNNIFVVISQW 715
>gi|395146545|gb|AFN53698.1| fatty acid desaturase 3a [Linum usitatissimum]
Length = 901
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 392 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 451
V G + RGKT+ DY+ E+ KKP SV +LENV++AD+ + SLS+A+ GK DSYGR
Sbjct: 385 VSGFGSKSRGKTVIDYITAEMKKKPRSVTFLENVEQADLLTRASLSQAVSKGKFADSYGR 444
Query: 452 EVSVSNAIFVTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQI 497
E+S SN IF+T +S + L E K K++EE I AK Q+
Sbjct: 445 EISTSNVIFITTTSAMVGDTDLSHENKTVKYTEESILGAKRWQMQL 490
>gi|383765463|ref|YP_005444444.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
gi|381385731|dbj|BAM02547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
Length = 877
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I KD ER++E+ G V + +++ + Q L L + +
Sbjct: 475 KEQIQKDWRERAKEVDGVVDKEVIAEVVSKMTGVPLTRLEKAETQRLLQLEDELHKTVV- 533
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
QDEAI +S+ I + R+G +D PRR + F F GP GK ++ ALAE ++
Sbjct: 534 ---SQDEAIKTVSRAIRRARSGLKD-----PRRPMGSFIFIGPSGVGKTLLSKALAEFMF 585
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + I D+ + N PP + GG + ++ ++P
Sbjct: 586 GDADALIRIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEQIRRRPY 633
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+VV L+ ++KA V N+L + ++ G+L DS+GR V N I + S+ D
Sbjct: 634 AVVLLDEIEKAHPDVFNTLLQVMEEGQLTDSFGRHVDFRNVILIMTSNIGAD 685
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI IS+ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E+ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEESLIQLDMS-EFGEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V + NSL + ++ G+L DS GR V N I + ++
Sbjct: 619 LFDEVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 664
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI IS+ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEEALIQLDMS-EFGEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V + NSL + ++ G+L DS GR V N I + ++
Sbjct: 619 LFDEVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 664
>gi|148272036|ref|YP_001221597.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829966|emb|CAN00893.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 836
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K + + L Q SG T G I+ LAQ++ L + + S
Sbjct: 444 AASLRDEEKNLLGERLRLEKQWRSGDVRTTAEVDEGLIAEVLAQATGIPVFKLTEE-ESS 502
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ +AL +++ Q+EAIS +S+TI + R G +D PRR F F GP GK
Sbjct: 503 RLVFMEKALHQRVIGQEEAISALSKTIRRTRAGLKD-----PRRPSGSFIFAGPTGVGKT 557
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ ++ I D+ + GE + + + G F G + ++
Sbjct: 558 ELAKALAEFLFDDEDALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 611
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 612 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|385653550|ref|ZP_10048103.1| ATP-dependent Clp protease, ATP-binding subunit [Leucobacter
chromiiresistens JG 31]
Length = 841
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSG--CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K+ I++ L Q SG A V+ G I+ LAQ++ L + + S
Sbjct: 445 AANKRDEEKKLIAERLRLEKQWRSGNVATQAEVDEGLIAEVLAQATGIPVFKLTEE-ETS 503
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ + AL +++ Q+EAIS +++TI ++R G +D P+R F F GP GK
Sbjct: 504 RLRFMEEALHQRVIGQNEAISALAKTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKT 558
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ ++ I D+ + GE + + + G F G + ++
Sbjct: 559 ELAKALAEFLFDDEDALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 612
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR + N + + ++
Sbjct: 613 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNL 666
>gi|170780568|ref|YP_001708900.1| Clp family ATP-binding protease [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155136|emb|CAQ00236.1| putative Clp-family ATP-binding protease [Clavibacter michiganensis
subsp. sepedonicus]
Length = 836
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K + + L Q SG T G I+ LAQ++ L + + S
Sbjct: 444 AASLRDEEKNLLGERLRLEKQWRSGDVRTTAEVDEGLIAEVLAQATGIPVFKLTEE-ESS 502
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ +AL +++ Q+EAIS +S+TI + R G +D PRR F F GP GK
Sbjct: 503 RLVFMEKALHQRVIGQEEAISALSKTIRRTRAGLKD-----PRRPSGSFIFAGPTGVGKT 557
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ ++ I D+ + GE + + + G F G + ++
Sbjct: 558 ELAKALAEFLFDDEDALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 611
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 612 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|380302202|ref|ZP_09851895.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 863
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDSLIQLDMS-EFGEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHVDIFNSLLQILEDGRLTDSQGRTVDFKNTVIIMTTNL 664
>gi|430747124|ref|YP_007206253.1| chaperone ATPase [Singulisphaera acidiphila DSM 18658]
gi|430018844|gb|AGA30558.1| ATPase with chaperone activity, ATP-binding subunit [Singulisphaera
acidiphila DSM 18658]
Length = 842
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 34/231 (14%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRA--- 301
KE I+++ ERS+E+ G V + +++ + P + + L R
Sbjct: 460 KETINREWRERSKEVDGTVDEEVVAEVISKM-----TGIP--LTRLEAEETGRLLRMEEE 512
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
+ +K+ Q EAI ISQ + + R+G +D P+R I F F GP GK +A ALAE
Sbjct: 513 IQKKVISQTEAIKRISQAVRRSRSGLKD-----PKRPIGCFIFAGPTGVGKTLLAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + N PP + GG + ++ +
Sbjct: 568 FMFGDSDALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRR 615
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+P +VV L+ ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 616 RPYAVVLLDEIEKAHPDVYNMLLQIMEEGRLTDSFGRNVDFKNTIIIMTTN 666
>gi|336392462|ref|ZP_08573861.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 830
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+S +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 514 LEKVLHKRVIGQEEAVSAVSRAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 568
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ K+ + G + G + ++ +KP
Sbjct: 569 ALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKP 622
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE 476
SVV L+ V+KA V N L + + G L DS GR V N I + S+ A L E
Sbjct: 623 YSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL--GATALRDE 680
Query: 477 MKDCKFSEEKI---YRA-KSRLTQIL---IEPALVNR 506
K F +K+ Y+A +SR+ + L P +NR
Sbjct: 681 -KSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFINR 716
>gi|389842947|ref|YP_006345027.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387857693|gb|AFK05784.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 829
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 355
TL AL E+I QDEAIS ++++I + R+G +D PRR I F F GP GK ++A
Sbjct: 511 TLENALHERIVSQDEAISAVAKSIRRARSGLKD-----PRRPIGTFLFLGPTGVGKTELA 565
Query: 356 IALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
ALAE ++G + + D+ + PP + VG D G TL + +
Sbjct: 566 KALAEYLFGDDKALVRFDMSEYMERFSVSRLIGAPPGY----VGYDE----GGTLTERIR 617
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
K+P SV+ + ++KA + N L + + G+L DS GR+V N I + S+
Sbjct: 618 ----KRPFSVILFDEIEKAHPDIFNILLQIMDDGRLTDSQGRQVDFRNTIVIMTSNL 670
>gi|333396625|ref|ZP_08478442.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 829
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+S +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 513 LEKVLHKRVIGQEEAVSAVSRAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 567
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ K+ + G + G + ++ +KP
Sbjct: 568 ALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKP 621
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE 476
SVV L+ V+KA V N L + + G L DS GR V N I + S+ A L E
Sbjct: 622 YSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL--GATALRDE 679
Query: 477 MKDCKFSEEKI---YRA-KSRLTQIL---IEPALVNR 506
K F +K+ Y+A +SR+ + L P +NR
Sbjct: 680 -KSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFINR 715
>gi|308044249|ref|NP_001183039.1| uncharacterized protein LOC100501371 [Zea mays]
gi|238008946|gb|ACR35508.1| unknown [Zea mays]
Length = 366
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 290 FDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLC 349
FDLSN+K L L + + Q+EA+S I +I + R+ E GA+ + DIWF+F GPD
Sbjct: 248 FDLSNYKLLMEHLFKVVGRQEEALSAICASIVRCRS-MERRRGANKKNDIWFSFYGPDSI 306
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
KR++ +ALAE+++G N I DL D NP FRGK D +
Sbjct: 307 AKRRVGVALAELMHGSSGNLIYLDLSLND--WGNP-------------SFRGKRATDCIF 351
Query: 410 WELLK 414
EL K
Sbjct: 352 EELRK 356
>gi|320102509|ref|YP_004178100.1| ATPase AAA-2 domain-containing protein [Isosphaera pallida ATCC
43644]
gi|319749791|gb|ADV61551.1| ATPase AAA-2 domain protein [Isosphaera pallida ATCC 43644]
Length = 844
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFD-LSNWKTLFRALT 303
KE +++ E+S+E+ G TV+G + ++ S + P + + S + L
Sbjct: 459 KEQATREWREKSREMDG----TVDGEVVAEVV-SKMTGIPLTRLEAEETSRLLKMEEELK 513
Query: 304 EKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEII 362
K+ Q EAI+ IS+ + + R G ++ PRR I F F GP GK +A +LAE +
Sbjct: 514 AKVISQHEAIARISRAVRRSRAGVKN-----PRRPIGCFIFAGPTGVGKTHLAKSLAEFM 568
Query: 363 YGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
+G ++ I D+ + N PP + GG + ++ ++P
Sbjct: 569 FGNADSLIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRP 616
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
SVV L+ ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 617 YSVVLLDEIEKAHPDVFNMLLQIMEEGRLTDSFGRHVDFKNTILIMTTN 665
>gi|381398100|ref|ZP_09923508.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
gi|380774766|gb|EIC08062.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
Length = 841
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSG--CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K +++ L Q SG A V+ G I+ LAQ++ L + + S
Sbjct: 448 AAALRDEEKSLLAERLRLEKQWRSGDVASHAVVDEGLIAEVLAQATGIPVFKLTEE-ETS 506
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ +AL +++ Q+EAI+ +S+TI ++R G +D P+R F F GP GK
Sbjct: 507 RLVFMEKALHQRVIGQEEAIAALSRTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKT 561
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 562 ELAKALAEFLFDDEGALISLDMS-EFGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 615
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 616 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 669
>gi|206901239|ref|YP_002251189.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
gi|206740342|gb|ACI19400.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
Length = 823
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 27/189 (14%)
Query: 288 CQFDLSNWKTLFRA---LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 343
Q + + L R L ++I QDEA+ V+S+ I + R+G +D PRR I F F
Sbjct: 497 AQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKD-----PRRPIGVFMF 551
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSV 397
GP GK ++A ALAE ++G + I D+ + + PP + GG
Sbjct: 552 LGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQ-- 609
Query: 398 QFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSN 457
+ ++ ++P SV+ L+ ++KA V N L + + G+L D +GR VS N
Sbjct: 610 ----------LTEKVHRRPYSVILLDEIEKAHSDVFNILLQIMDEGQLTDGHGRRVSFKN 659
Query: 458 AIFVTASSF 466
I + S+F
Sbjct: 660 TILIMTSNF 668
>gi|325109333|ref|YP_004270401.1| ATPase AAA [Planctomyces brasiliensis DSM 5305]
gi|324969601|gb|ADY60379.1| ATPase AAA-2 domain protein [Planctomyces brasiliensis DSM 5305]
Length = 849
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I+++ E+S++ G A + ++ +A+ + ++ + D + L
Sbjct: 464 KETITQEWKEKSKQKDGLVDAEIAATV---VAKMTGVPLTRISSE-DAVRLLEMEEELHR 519
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEAI +S+ + + R+G +D P+R F F GP GK +A LAE ++
Sbjct: 520 RVISQDEAIKQVSKAVRRSRSGLKD-----PKRPTGVFLFAGPTGVGKTLLAKTLAEFMF 574
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G +E I D+ + N PP + GG + ++ ++P
Sbjct: 575 GDEEALIQIDMSEYQEKHNISRLIGAPPGYVGYEEGGQ------------LTEQIRRRPY 622
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV L+ ++KA V N L + ++ G L DS+GR+V N I + ++
Sbjct: 623 AVVLLDEIEKAHPDVYNMLLQIMEEGHLTDSFGRKVDFKNVILIMTTN 670
>gi|227872597|ref|ZP_03990933.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
gi|227841598|gb|EEJ51892.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
Length = 827
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
K L L E++ Q+EA+ ++Q I + R G +D P+R I F F GP GK
Sbjct: 505 RLKNLENLLHERVIGQNEAVKAVAQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKT 559
Query: 353 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
+++ A+AE+I+G ++N I D+ + +PP + VG D G L++
Sbjct: 560 ELSKAIAEVIFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 611
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + P SV+ + ++KA V N L + + G + DS GR+VS N I + S+
Sbjct: 612 KVR----RNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNA 667
Query: 467 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ I P ++ KD ++ + K+ + L P +NR
Sbjct: 668 GAEQIISPKKLGFETTPGQLDKDYQYMKNKVLEE----LKNLFRPEFLNR 713
>gi|293364467|ref|ZP_06611193.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
gi|291317313|gb|EFE57740.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
Length = 776
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 429 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 475
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 476 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 529
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 530 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 583
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 584 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 643
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E I + + P +NR + + S SE M
Sbjct: 644 GAKDIRFDQENIEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 689
>gi|415750498|ref|ZP_11478340.1| clpC [Streptococcus pneumoniae SV35]
gi|415753392|ref|ZP_11480374.1| clpC [Streptococcus pneumoniae SV36]
gi|381309039|gb|EIC49882.1| clpC [Streptococcus pneumoniae SV36]
gi|381316348|gb|EIC57098.1| clpC [Streptococcus pneumoniae SV35]
Length = 810
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G S + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGASPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|307702569|ref|ZP_07639521.1| clpC [Streptococcus oralis ATCC 35037]
gi|307623685|gb|EFO02670.1| clpC [Streptococcus oralis ATCC 35037]
Length = 810
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E I + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENIEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|283779663|ref|YP_003370418.1| ATPase AAA [Pirellula staleyi DSM 6068]
gi|283438116|gb|ADB16558.1| ATPase AAA-2 domain protein [Pirellula staleyi DSM 6068]
Length = 852
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
K+ I+K+ ++S+E G V I+ +++ + ++ + L K + L +
Sbjct: 474 KDNITKEWRDKSRETDGVVDEEV---IAEVVSKMTGIPLTRMSTEDSLRLMK-MEEELHK 529
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
K+ QD+A++ I++ + + R+G +D PRR F F GP GK +A ALAE ++
Sbjct: 530 KVISQDQAVTAIAKAVRRTRSGLKD-----PRRPAGCFVFAGPTGVGKTLLAKALAEFMF 584
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + I D+ + N PP + GG + ++ ++P
Sbjct: 585 GDADALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRPY 632
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV L+ ++KA V N+L + ++ G+L DS+GR V N I + ++
Sbjct: 633 AVVLLDEIEKAHPDVFNTLLQVMEEGRLTDSFGRRVDFRNVILIMTTN 680
>gi|28493032|ref|NP_787193.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
gi|28572245|ref|NP_789025.1| Clp-family ATP-binding protease/regulator [Tropheryma whipplei
TW08/27]
gi|28410376|emb|CAD66762.1| putative Clp-family ATP-binding protease/regulator [Tropheryma
whipplei TW08/27]
gi|28476072|gb|AAO44162.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
Length = 840
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 262 CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQT 319
+ TV+ G I+ LA S++ P D S + R+L +++ QDEAIS +S+
Sbjct: 474 ASAGTVDEGLIAEVLA--SATGVPVFRLTEDESVRLMMMERSLHQRVIGQDEAISSLSRA 531
Query: 320 IAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 379
+ + R G +D + S F F GP GK ++A ALAE ++ ++ + D+ + G
Sbjct: 532 MRRTRAGLKDPNRPSG----SFIFAGPTGVGKTELAKALAEFLFDNEDALVSLDMS-EYG 586
Query: 380 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 439
E + + + G F G + ++ +KP SVV + ++KA V NSL +
Sbjct: 587 ERHTVSRLF-----GAPPGFVGFEEGGQLTEKIRRKPFSVVLFDEIEKAHPDVFNSLLQI 641
Query: 440 IQTGKLPDSYGREVSVSNAIFVTASSF 466
++ G+L D+ GR V N I V ++
Sbjct: 642 LEEGRLSDAQGRMVDFRNTIIVMTTNL 668
>gi|420146514|ref|ZP_14653925.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398401747|gb|EJN55199.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 829
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+ A+S +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 513 LEKVLHKRVIGQEAAVSAVSRAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 567
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ K+ + G + G + ++ +KP
Sbjct: 568 ALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLVGAPPGYVGYEEGGQLTEKVRQKP 621
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE 476
SVV L+ V+KA V N L + + G L DS GR V N I + S+ A L E
Sbjct: 622 YSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL--GATALRDE 679
Query: 477 MKDCKFSEEKI---YRA-KSRLTQIL---IEPALVNR 506
K F +K+ Y+A +SR+ + L P +NR
Sbjct: 680 -KSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFINR 715
>gi|417916971|ref|ZP_12560537.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
gi|342827718|gb|EGU62100.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
Length = 810
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQELPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GVKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|153006164|ref|YP_001380489.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152029737|gb|ABS27505.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 935
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ + R G +D RR + F F GP GK ++A ALAE
Sbjct: 597 LHQRVIGQDEAVHAVSEAVRLARAGLKDR-----RRPVATFFFLGPTGVGKTELARALAE 651
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++ + D+ + PP + GG + + +
Sbjct: 652 LVFGDEDAMVRIDMSEYMERHTVARLIGAPPGYVGYEEGGQ------------LTERVRR 699
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-----FVED 469
KP SV+ L+ +KA + VQN L + ++ G+L D GR V +NAI + S+ E+
Sbjct: 700 KPYSVILLDEFEKAHLDVQNVLLQVLEDGRLTDGKGRVVDFANAIIIATSNIGSDLIQEN 759
Query: 470 ARILPSEMKD 479
R P++ KD
Sbjct: 760 LRAAPAQQKD 769
>gi|239618401|ref|YP_002941723.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239507232|gb|ACR80719.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 828
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q D +L AL ++I QDEAI+ +++ I + R+G +D PRR I F F GP
Sbjct: 502 QSDSERLLSLEEALHKRIVGQDEAITAVAKAIRRARSGLKD-----PRRPIGTFLFLGPT 556
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 401
GK ++A ALAE ++G ++ + D+ + PP + VG D G
Sbjct: 557 GVGKTELAKALAEYLFGDEKALVRFDMSEYMERFSVSRLIGAPPGY----VGYDE----G 608
Query: 402 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 461
TL + + K+P S++ + ++KA + N L + + G+L DS GR V N I +
Sbjct: 609 GTLTERIR----KRPFSIILFDEIEKAHFDIFNLLLQIMDDGRLTDSQGRSVDFKNTIVI 664
Query: 462 TASSF 466
S+
Sbjct: 665 MTSNL 669
>gi|418196866|ref|ZP_12833336.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
gi|353858026|gb|EHE37987.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
Length = 327
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 21 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 67
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 68 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 121
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 122 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 175
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 176 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 235
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 236 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 281
>gi|217967862|ref|YP_002353368.1| ATPase [Dictyoglomus turgidum DSM 6724]
gi|217336961|gb|ACK42754.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
Length = 823
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 27/189 (14%)
Query: 288 CQFDLSNWKTLFRA---LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 343
Q + + L R L ++I QDEA+ V+S+ I + R+G +D PRR I F F
Sbjct: 497 AQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKD-----PRRPIGVFMF 551
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSV 397
GP GK ++A ALAE ++G + I D+ + + PP + GG
Sbjct: 552 LGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQ-- 609
Query: 398 QFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSN 457
+ ++ ++P SV+ + ++KA V N L + + G+L D +GR VS N
Sbjct: 610 ----------LTEKVHRRPYSVILFDEIEKAHSDVFNILLQIMDEGQLTDGHGRRVSFKN 659
Query: 458 AIFVTASSF 466
I + S+F
Sbjct: 660 TILIMTSNF 668
>gi|335045358|ref|ZP_08538381.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333759144|gb|EGL36701.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 818
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 38/230 (16%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
K L L ++ Q+EA+ ++Q I + R G +D P+R I F F GP GK
Sbjct: 501 KLKNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKT 555
Query: 353 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
+++ ALAE ++G ++N I D+ + +PP + VG D G L++
Sbjct: 556 ELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 607
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + P SV+ + ++KA V N L + + G + DS GR+VS N I + S+
Sbjct: 608 KVR----RNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNV 663
Query: 467 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ I P ++ KD K+ + K+ + L +P +NR
Sbjct: 664 GAEQIISPKKLGFDSPADQGDKDYKYMKTKVLEE----LKHLFKPEFLNR 709
>gi|206895288|ref|YP_002247181.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
gi|206737905|gb|ACI16983.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
Length = 826
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 249 SKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDW 308
S DLT QE++ SA G QL +S L L ++
Sbjct: 491 SNDLTVTDQEVAEVVSAW-TGIPVTQLEESEKEKLAKLE------------EILHRRVVG 537
Query: 309 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 367
QDEAIS ++Q I + RTG +D P+R I F F GP GK ++A ALAE+++G +
Sbjct: 538 QDEAISAVAQAIRRARTGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAEVLFGDES 592
Query: 368 NFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
+ D+ + + +PP + GG + + ++P SV+
Sbjct: 593 ALVRFDMSEYMEKHTVSRLIGSPPGYVGYEEGGQ------------LTEAVRRRPYSVIL 640
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N L + + G+L D+ GR V N I + S+
Sbjct: 641 FDEIEKAHPDIHNLLLQVLDDGRLTDAKGRIVDFKNTIIIMTSNL 685
>gi|148991946|ref|ZP_01821720.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|421221379|ref|ZP_15678210.1| clpC [Streptococcus pneumoniae 2070425]
gi|421223635|ref|ZP_15680412.1| clpC [Streptococcus pneumoniae 2070531]
gi|147928995|gb|EDK80006.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|395584367|gb|EJG44760.1| clpC [Streptococcus pneumoniae 2070425]
gi|395586094|gb|EJG46472.1| clpC [Streptococcus pneumoniae 2070531]
Length = 810
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
S E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 SKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|363897398|ref|ZP_09323937.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
gi|361958895|gb|EHL12192.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
Length = 818
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 295 WKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRK 353
K L L ++ Q+EA+ ++Q I + R G +D P+R I F F GP GK +
Sbjct: 502 LKNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKTE 556
Query: 354 IAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
++ ALAE ++G ++N I D+ + +PP + VG D G L++
Sbjct: 557 LSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSEK 608
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFV 467
V + P SV+ + ++KA V N L + + G + DS GR+VS N I + S+
Sbjct: 609 VR----RNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNVG 664
Query: 468 EDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ I P ++ KD K+ K+ + L +P +NR
Sbjct: 665 AEQIISPKKLGFDSPADQGDKDYKYMRTKVLEE----LKHLFKPEFLNR 709
>gi|417847729|ref|ZP_12493691.1| chaperone protein ClpB [Streptococcus mitis SK1073]
gi|339456563|gb|EGP69154.1| chaperone protein ClpB [Streptococcus mitis SK1073]
Length = 810
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + PI KDL S L+ ++G +L Q+ D+ + L
Sbjct: 463 AKEEEVPIYKDLVTESDILTTLSR--LSGIPVQKLTQT------------DVKKYLNLEA 508
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 509 ELHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|315612206|ref|ZP_07887120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
gi|315315599|gb|EFU63637.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
Length = 810
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|116334279|ref|YP_795806.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
gi|116099626|gb|ABJ64775.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
Length = 828
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q D L + L +++ Q EA+S +S+ I + R+G +D P R I F F GP
Sbjct: 504 QTDADRLVNLEKILHQRVIGQSEAVSAVSRAIRRARSGLKD-----PNRPIGSFMFLGPT 558
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++A ALAE ++G ++N I D+ K+ + G + + G
Sbjct: 559 GVGKTELAKALAEAMFGSEDNMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQ 612
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +KP SVV + V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 LTEKVRQKPYSVVLFDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVDFRNTILIMTSNL 671
>gi|322377948|ref|ZP_08052436.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
gi|321281124|gb|EFX58136.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
Length = 810
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|406830128|ref|ZP_11089722.1| ATPase AAA [Schlesneria paludicola DSM 18645]
Length = 838
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I+KD E+S+E G A V I+ +A+ + L+ + D + L
Sbjct: 467 KENINKDWREKSKEKEGVVDAEV---IAEVVAKMTGIPLTRLSSE-DAVRLLKMEEELHR 522
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q+EAI +++ + + R+G +D PRR F F GP GK A LAE ++
Sbjct: 523 RVVSQNEAIKQVAKCVRRSRSGLKD-----PRRPTGVFLFAGPTGVGKTLTAKTLAEFMF 577
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + N PP + GG + ++ ++P
Sbjct: 578 GDQDALIQIDMSEYMEKHNVSRLIGAPPGYVGFEDGGQ------------LTEKIRRRPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
SVV L+ ++KA V N L + ++ G L DS+GR+V N I + ++
Sbjct: 626 SVVLLDEIEKAHPDVFNMLLQIMEEGHLTDSFGRKVDFKNTILIMTTN 673
>gi|418975472|ref|ZP_13523376.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
gi|383347455|gb|EID25433.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNILLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|418199056|ref|ZP_12835508.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|419452127|ref|ZP_13992107.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|419519921|ref|ZP_14059524.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
gi|353859471|gb|EHE39422.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|379621346|gb|EHZ85994.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|379638075|gb|EIA02621.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
Length = 795
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|421235043|ref|ZP_15691657.1| clpC [Streptococcus pneumoniae 2061617]
gi|395599201|gb|EJG59381.1| clpC [Streptococcus pneumoniae 2061617]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEKEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421299648|ref|ZP_15750329.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
gi|395898028|gb|EJH08977.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
Length = 685
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 338 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 384
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 385 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 438
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 439 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 492
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 493 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 552
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 553 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 598
>gi|306826128|ref|ZP_07459463.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304431604|gb|EFM34585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+I+ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVIFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S S+ M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSDHM 723
>gi|289168872|ref|YP_003447141.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
gi|288908439|emb|CBJ23281.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 30/299 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLIG 534
KD +F +E + + + P +NR + + S +S+ M + R L+
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHMQEVVKIMVRPLVA 736
>gi|421312955|ref|ZP_15763552.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
gi|395907707|gb|EJH18597.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
Length = 795
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|418968298|ref|ZP_13519916.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
gi|383340682|gb|EID18974.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|419767404|ref|ZP_14293559.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
gi|383353144|gb|EID30769.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
Length = 810
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|336437637|ref|ZP_08617341.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004940|gb|EGN34993.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 814
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D + L + L ++ Q+EA+S +++ + + R G +D PRR I F F GP
Sbjct: 497 DAQRLQKLEKTLHRRVIGQEEAVSAVARAVKRGRVGLKD-----PRRPIGSFLFLGPTGV 551
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKT 403
GK +++ ALAE ++G +++ I D+ + + +PP + GG
Sbjct: 552 GKTELSKALAETLFGREDSMIRVDMSEYMEKHSVAKMIGSPPGYVGHEEGGQ-------- 603
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L+D V P SV+ + ++KA V N L + + G + DS GR+V SN + +
Sbjct: 604 LSDQVRTH----PYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFSNTVIIMT 659
Query: 464 SSFVEDARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
S+ A + P ++ +D K E++ + +++ P +NR
Sbjct: 660 SNAGAKAIVEPKKLGFAAKEDTKADYERMKQNVMEEVRMIFRPEFLNR 707
>gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50952128|gb|AAT89829.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 839
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSGCCSATVN---GSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K + + L Q SG T G I+ LAQ++ L + + +
Sbjct: 444 AASLRDEEKNLLGERLRLEKQWRSGDVKTTAEVDEGLIAEVLAQATGIPVFKLTEE-ESA 502
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ +AL +++ Q+EAI+ +S+TI + R G +D P+R F F GP GK
Sbjct: 503 RLVFMEKALHQRVIGQEEAIAALSKTIRRTRAGLKD-----PKRPSGSFIFAGPTGVGKT 557
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 558 ELAKALAEFLFDDETAMISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEDGGQLTEKV 611
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR V N + + ++
Sbjct: 612 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNL 665
>gi|148988840|ref|ZP_01820255.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147925651|gb|EDK76727.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418147450|ref|ZP_12784222.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|418190429|ref|ZP_12826938.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
gi|353810530|gb|EHD90781.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|353851688|gb|EHE31679.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421271635|ref|ZP_15722485.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
gi|395865774|gb|EJG76912.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
Length = 795
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|417923255|ref|ZP_12566725.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
gi|342837188|gb|EGU71386.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDNM 723
>gi|421228460|ref|ZP_15685153.1| clpC [Streptococcus pneumoniae 2072047]
gi|395592354|gb|EJG52625.1| clpC [Streptococcus pneumoniae 2072047]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418203436|ref|ZP_12839859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|353864884|gb|EHE44794.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418097329|ref|ZP_12734434.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
gi|353765952|gb|EHD46493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418976927|ref|ZP_13524766.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
gi|383350654|gb|EID28517.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418172353|ref|ZP_12808970.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
gi|353833556|gb|EHE13666.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
Length = 804
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 457 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 503
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 504 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 557
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 558 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 611
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 612 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 671
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 672 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 717
>gi|417687654|ref|ZP_12336921.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|418160938|ref|ZP_12797634.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|419522151|ref|ZP_14061742.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|421237290|ref|ZP_15693881.1| clpC [Streptococcus pneumoniae 2071004]
gi|332071464|gb|EGI81958.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|353820203|gb|EHE00391.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|379536138|gb|EHZ01329.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|395599867|gb|EJG60028.1| clpC [Streptococcus pneumoniae 2071004]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421310600|ref|ZP_15761222.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
gi|395908215|gb|EJH19098.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
Length = 795
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 708
>gi|418194749|ref|ZP_12831235.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|418203447|ref|ZP_12839869.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|419456451|ref|ZP_13996405.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|421286520|ref|ZP_15737291.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
gi|353854888|gb|EHE34859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|353864578|gb|EHE44490.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|379626414|gb|EHZ91032.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|395884758|gb|EJG95794.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421218984|ref|ZP_15675871.1| clpC [Streptococcus pneumoniae 2070335]
gi|395581581|gb|EJG42052.1| clpC [Streptococcus pneumoniae 2070335]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|387627321|ref|YP_006063497.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|417695067|ref|ZP_12344251.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444381647|ref|ZP_21179853.1| ATPase family [Streptococcus pneumoniae PCS8106]
gi|444385299|ref|ZP_21183378.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|301795107|emb|CBW37577.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|332199016|gb|EGJ13097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444250579|gb|ELU57058.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|444253899|gb|ELU60346.1| ATPase family [Streptococcus pneumoniae PCS8106]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421226057|ref|ZP_15682790.1| clpC [Streptococcus pneumoniae 2070768]
gi|395587868|gb|EJG48207.1| clpC [Streptococcus pneumoniae 2070768]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418077429|ref|ZP_12714658.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|419483214|ref|ZP_14022997.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
gi|353745603|gb|EHD26272.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|379577746|gb|EHZ42664.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|323357510|ref|YP_004223906.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
gi|323273881|dbj|BAJ74026.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
Length = 841
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSG--CCSATVN-GSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K +++ L Q SG A V+ G I+ LAQ++ L + + S
Sbjct: 448 AASLRDEEKSLLAERLRLEKQWRSGDVASHAVVDEGLIAEVLAQATGIPVFKLTEE-ESS 506
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ + L +++ Q+EAI+ +S+TI ++R G +D P+R F F GP GK
Sbjct: 507 RLMFMEKTLHQRVIGQEEAIAALSRTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKT 561
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 562 ELAKALAEFLFDDEGALISLDMS-EFGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 615
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR + N + + ++
Sbjct: 616 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNL 669
>gi|182685132|ref|YP_001836879.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|303254856|ref|ZP_07340941.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|303259682|ref|ZP_07345658.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|303262149|ref|ZP_07348094.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303264584|ref|ZP_07350503.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|303266107|ref|ZP_07352001.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|303269948|ref|ZP_07355685.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|387760270|ref|YP_006067248.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|418140535|ref|ZP_12777356.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|418181561|ref|ZP_12818126.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|419515691|ref|ZP_14055313.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|421269378|ref|ZP_15720240.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|421296966|ref|ZP_15747669.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
gi|182630466|gb|ACB91414.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|301802859|emb|CBW35637.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|302598127|gb|EFL65188.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|302636789|gb|EFL67279.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302639234|gb|EFL69693.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640513|gb|EFL70923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|302644411|gb|EFL74664.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|302645954|gb|EFL76182.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|353841277|gb|EHE21334.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|353904381|gb|EHE79858.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|379634007|gb|EHZ98573.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|395866297|gb|EJG77428.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|395892540|gb|EJH03530.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168576066|ref|ZP_02721971.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|307128461|ref|YP_003880492.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|418075045|ref|ZP_12712291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|418087821|ref|ZP_12724986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|418133653|ref|ZP_12770519.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|418183745|ref|ZP_12820299.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|418217654|ref|ZP_12844329.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419432590|ref|ZP_13972715.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|419469997|ref|ZP_14009861.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|419496392|ref|ZP_14036106.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|419498572|ref|ZP_14038274.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|421303890|ref|ZP_15754551.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|421308397|ref|ZP_15759035.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
gi|183578054|gb|EDT98582.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|306485523|gb|ADM92392.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|353745219|gb|EHD25890.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|353755498|gb|EHD36101.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|353803889|gb|EHD84179.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|353846763|gb|EHE26791.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|353868467|gb|EHE48354.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|379542707|gb|EHZ07862.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|379591892|gb|EHZ56712.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|379597636|gb|EHZ62434.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|379626623|gb|EHZ91240.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|395898307|gb|EJH09252.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|395905200|gb|EJH16106.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|307705869|ref|ZP_07642707.1| chaperone clpB 1 [Streptococcus mitis SK597]
gi|307620530|gb|EFN99628.1| chaperone clpB 1 [Streptococcus mitis SK597]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
K L + L +++ Q EA+ ++Q I + R G +D PRR I F F GP GK
Sbjct: 502 KLKKLEQNLHQRVVGQSEAVHAVAQAIKRGRVGLKD-----PRRPIGSFMFLGPTGVGKT 556
Query: 353 KIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
+++ ALAE+++G + + I D+ + +PP + VG D G L++
Sbjct: 557 ELSKALAELMFGSENDLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSE 608
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V ++P SVV + ++KA V N L + + G + D+ GR++S N I + S+
Sbjct: 609 KVR----RRPYSVVLFDEIEKAHPDVLNILLQVLDDGHITDAQGRKISFKNTIIIMTSNA 664
Query: 467 VEDARILPSEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
++ + P + K+ + +EK+ R L P +NR
Sbjct: 665 GAESIVNPKRLGFSSADGSREKNYELMKEKVMEEVKR----LFRPEFLNR 710
>gi|225857764|ref|YP_002739275.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
gi|225726282|gb|ACO22134.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
Length = 810
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168486303|ref|ZP_02710811.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|418185965|ref|ZP_12822500.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|419511380|ref|ZP_14051018.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|419531233|ref|ZP_14070756.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|421214175|ref|ZP_15671125.1| clpC [Streptococcus pneumoniae 2070108]
gi|421216257|ref|ZP_15673174.1| clpC [Streptococcus pneumoniae 2070109]
gi|183570676|gb|EDT91204.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|353846558|gb|EHE26587.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|379570061|gb|EHZ35026.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|379630460|gb|EHZ95046.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|395577921|gb|EJG38450.1| clpC [Streptococcus pneumoniae 2070108]
gi|395578646|gb|EJG39160.1| clpC [Streptococcus pneumoniae 2070109]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|149003057|ref|ZP_01827966.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|149020113|ref|ZP_01835087.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|237650487|ref|ZP_04524739.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974]
gi|237822387|ref|ZP_04598232.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974M2]
gi|418144802|ref|ZP_12781597.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|419458740|ref|ZP_13998679.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
gi|147758798|gb|EDK65794.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|147930791|gb|EDK81772.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|353807268|gb|EHD87540.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|379528736|gb|EHY93990.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|410477532|ref|YP_006744291.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444386653|ref|ZP_21184680.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444391106|ref|ZP_21189019.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444393488|ref|ZP_21191134.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444396370|ref|ZP_21193894.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444398480|ref|ZP_21195962.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444399614|ref|ZP_21197061.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444402695|ref|ZP_21199850.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444405756|ref|ZP_21202610.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444408097|ref|ZP_21204764.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444410598|ref|ZP_21207126.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444412498|ref|ZP_21208819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444415474|ref|ZP_21211711.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444418459|ref|ZP_21214438.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444421115|ref|ZP_21216869.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444422920|ref|ZP_21218556.1| ATPase family [Streptococcus pneumoniae PNI0446]
gi|406370477|gb|AFS44167.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444254404|gb|ELU60837.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444254806|gb|ELU61182.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444255264|gb|ELU61620.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444259209|gb|ELU65525.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444259527|gb|ELU65840.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444266016|gb|ELU71993.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444268475|gb|ELU74329.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444271693|gb|ELU77444.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444272352|gb|ELU78071.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444274460|gb|ELU80107.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444277063|gb|ELU82587.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444279857|gb|ELU85241.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444281422|gb|ELU86740.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444283212|gb|ELU88417.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444287731|gb|ELU92644.1| ATPase family [Streptococcus pneumoniae PNI0446]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|405761809|ref|YP_006702405.1| stress response-related Clp ATPase [Streptococcus pneumoniae
SPNA45]
gi|404278698|emb|CCM09331.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPNA45]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421246491|ref|ZP_15702981.1| clpC [Streptococcus pneumoniae 2082170]
gi|395616101|gb|EJG76114.1| clpC [Streptococcus pneumoniae 2082170]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418201146|ref|ZP_12837585.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|419524681|ref|ZP_14064250.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|421243972|ref|ZP_15700481.1| clpC [Streptococcus pneumoniae 2081074]
gi|353862579|gb|EHE42510.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|379554905|gb|EHZ19977.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|395605648|gb|EJG65767.1| clpC [Streptococcus pneumoniae 2081074]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|225859966|ref|YP_002741476.1| ClpB protein [Streptococcus pneumoniae 70585]
gi|225721797|gb|ACO17651.1| ClpB protein [Streptococcus pneumoniae 70585]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|418196859|ref|ZP_12833330.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
gi|353858891|gb|EHE38850.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|307068805|ref|YP_003877771.1| ATPase [Streptococcus pneumoniae AP200]
gi|417699571|ref|ZP_12348739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|418103933|ref|ZP_12741001.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|418126846|ref|ZP_12763748.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|418149532|ref|ZP_12786291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|418167857|ref|ZP_12804507.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|418192642|ref|ZP_12829141.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|418215401|ref|ZP_12842132.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|419454288|ref|ZP_13994255.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419472072|ref|ZP_14011928.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|419485415|ref|ZP_14025186.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|419487741|ref|ZP_14027500.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|419494317|ref|ZP_14034039.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|419504919|ref|ZP_14044582.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|419507059|ref|ZP_14046717.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|421207704|ref|ZP_15664747.1| clpC [Streptococcus pneumoniae 2090008]
gi|421230746|ref|ZP_15687404.1| clpC [Streptococcus pneumoniae 2061376]
gi|421239519|ref|ZP_15696080.1| clpC [Streptococcus pneumoniae 2071247]
gi|421241666|ref|ZP_15698207.1| clpC [Streptococcus pneumoniae 2080913]
gi|421246020|ref|ZP_15702515.1| clpC [Streptococcus pneumoniae 2081685]
gi|421250464|ref|ZP_15706914.1| clpC [Streptococcus pneumoniae 2082239]
gi|421293004|ref|ZP_15743735.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|421300205|ref|ZP_15750876.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|421315048|ref|ZP_15765632.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
gi|306410342|gb|ADM85769.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
pneumoniae AP200]
gi|332198608|gb|EGJ12691.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|353773496|gb|EHD53993.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|353794382|gb|EHD74739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|353810334|gb|EHD90586.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|353827601|gb|EHE07752.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|353854476|gb|EHE34454.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|353867691|gb|EHE47582.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|379543461|gb|EHZ08611.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|379580188|gb|EHZ45083.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|379584633|gb|EHZ49499.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|379591579|gb|EHZ56403.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|379604105|gb|EHZ68867.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|379604506|gb|EHZ69265.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379622426|gb|EHZ87061.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|395571807|gb|EJG32411.1| clpC [Streptococcus pneumoniae 2090008]
gi|395592548|gb|EJG52813.1| clpC [Streptococcus pneumoniae 2061376]
gi|395599653|gb|EJG59818.1| clpC [Streptococcus pneumoniae 2071247]
gi|395605942|gb|EJG66053.1| clpC [Streptococcus pneumoniae 2080913]
gi|395606134|gb|EJG66243.1| clpC [Streptococcus pneumoniae 2081685]
gi|395612041|gb|EJG72087.1| clpC [Streptococcus pneumoniae 2082239]
gi|395891252|gb|EJH02254.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|395899629|gb|EJH10568.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|395911632|gb|EJH22497.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
Length = 810
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|194398319|ref|YP_002038791.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|418122270|ref|ZP_12759210.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|419481010|ref|ZP_14020811.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|419492127|ref|ZP_14031858.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|419500710|ref|ZP_14040401.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|419533394|ref|ZP_14072906.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|421276047|ref|ZP_15726873.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|194357986|gb|ACF56434.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|353790599|gb|EHD70981.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|379569176|gb|EHZ34150.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|379591208|gb|EHZ56037.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|379597822|gb|EHZ62619.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|379604297|gb|EHZ69058.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|395871801|gb|EJG82903.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|429316957|emb|CCP36686.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034156]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|169834204|ref|YP_001695552.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
gi|168996706|gb|ACA37318.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|15902001|ref|NP_346605.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|111657990|ref|ZP_01408696.1| hypothetical protein SpneT_02000846 [Streptococcus pneumoniae
TIGR4]
gi|418131364|ref|ZP_12768244.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|418188194|ref|ZP_12824712.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|418231032|ref|ZP_12857626.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|419478855|ref|ZP_14018674.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
gi|14973705|gb|AAK76245.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|353800779|gb|EHD81088.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|353848003|gb|EHE28022.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|353884342|gb|EHE64142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|379563127|gb|EHZ28132.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419476591|ref|ZP_14016422.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
gi|379557307|gb|EHZ22353.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168484349|ref|ZP_02709301.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|168491727|ref|ZP_02715870.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225855688|ref|YP_002737200.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225862011|ref|YP_002743520.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298229669|ref|ZP_06963350.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255666|ref|ZP_06979252.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501710|ref|YP_003723650.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|387789235|ref|YP_006254303.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|417313663|ref|ZP_12100372.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|417697393|ref|ZP_12346568.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|418084021|ref|ZP_12721213.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|418086183|ref|ZP_12723358.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|418092818|ref|ZP_12729954.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|418095001|ref|ZP_12732124.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|418101678|ref|ZP_12738757.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|418108864|ref|ZP_12745897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|418111192|ref|ZP_12748207.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|418119692|ref|ZP_12756643.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|418142741|ref|ZP_12779548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|418151709|ref|ZP_12788451.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|418153979|ref|ZP_12790713.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|418158568|ref|ZP_12795277.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|418163308|ref|ZP_12799986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|418165520|ref|ZP_12802182.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|418168216|ref|ZP_12804862.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|418177016|ref|ZP_12813603.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|418219962|ref|ZP_12846623.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|418222255|ref|ZP_12848904.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|418224411|ref|ZP_12851046.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|418228695|ref|ZP_12855308.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|418239748|ref|ZP_12866294.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419424061|ref|ZP_13964269.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|419426151|ref|ZP_13966342.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|419428262|ref|ZP_13968439.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|419437016|ref|ZP_13977097.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|419439187|ref|ZP_13979250.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|419445722|ref|ZP_13985733.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|419447883|ref|ZP_13987884.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|419449982|ref|ZP_13989975.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|419461040|ref|ZP_14000962.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|419463359|ref|ZP_14003258.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|419490013|ref|ZP_14029758.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|419502861|ref|ZP_14042539.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|419526960|ref|ZP_14066511.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|419529168|ref|ZP_14068705.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|421212045|ref|ZP_15669022.1| clpC [Streptococcus pneumoniae 2070035]
gi|421232890|ref|ZP_15689526.1| clpC [Streptococcus pneumoniae 2080076]
gi|421271771|ref|ZP_15722618.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|421288605|ref|ZP_15739363.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
gi|172042451|gb|EDT50497.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|183574069|gb|EDT94597.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225723084|gb|ACO18937.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225726430|gb|ACO22281.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298237305|gb|ADI68436.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|327388939|gb|EGE87287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|332198820|gb|EGJ12902.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|353753545|gb|EHD34168.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|353755023|gb|EHD35633.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|353761488|gb|EHD42055.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|353762538|gb|EHD43097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|353768777|gb|EHD49300.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|353775321|gb|EHD55802.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|353780303|gb|EHD60762.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|353788805|gb|EHD69201.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|353802442|gb|EHD82737.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|353812032|gb|EHD92268.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|353815305|gb|EHD95525.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|353819750|gb|EHD99939.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|353825443|gb|EHE05608.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|353827300|gb|EHE07453.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|353836135|gb|EHE16223.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|353838975|gb|EHE19051.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|353872028|gb|EHE51897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|353872650|gb|EHE52514.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|353876943|gb|EHE56788.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|353879004|gb|EHE58832.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|353890783|gb|EHE70543.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|379138977|gb|AFC95768.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|379528913|gb|EHY94166.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|379529082|gb|EHY94334.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|379535532|gb|EHZ00733.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|379555566|gb|EHZ20633.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|379562812|gb|EHZ27821.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|379569542|gb|EHZ34512.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|379584483|gb|EHZ49351.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|379584999|gb|EHZ49862.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|379598076|gb|EHZ62871.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|379611303|gb|EHZ76030.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|379611623|gb|EHZ76346.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|379616138|gb|EHZ80838.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|379616557|gb|EHZ81252.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|379620926|gb|EHZ85576.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|395571524|gb|EJG32143.1| clpC [Streptococcus pneumoniae 2070035]
gi|395593125|gb|EJG53377.1| clpC [Streptococcus pneumoniae 2080076]
gi|395877330|gb|EJG88399.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|395885237|gb|EJG96264.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419509280|ref|ZP_14048928.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
gi|379609571|gb|EHZ74309.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421209901|ref|ZP_15666910.1| clpC [Streptococcus pneumoniae 2070005]
gi|395572071|gb|EJG32672.1| clpC [Streptococcus pneumoniae 2070005]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419780450|ref|ZP_14306299.1| ATPase, AAA family [Streptococcus oralis SK100]
gi|383185250|gb|EIC77747.1| ATPase, AAA family [Streptococcus oralis SK100]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 486
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 487 IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ + + P +NR + + S SE M
Sbjct: 689 MEKRIFEELKKAYRPEFINRIDEKLVFHSLDSEHM 723
>gi|239916624|ref|YP_002956182.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414926|ref|ZP_06246668.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837831|gb|ACS29628.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 875
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 355
TL L E++ QDEAI+++S I + R+G D PRR I F F GP GK ++A
Sbjct: 569 TLDATLKERVVGQDEAITLVSDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELA 623
Query: 356 IALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
ALAE ++ + I D+ + PP + GG +
Sbjct: 624 KALAEALFDSESAMIRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQ------------LT 671
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS---- 465
+ ++P SVV L+ ++KA V N+L + + G++ DS GR V N I + S+
Sbjct: 672 EAVRRRPYSVVLLDEIEKAHPDVFNTLLQVLDDGRITDSQGRTVDFRNTIIIMTSNIGAH 731
Query: 466 --FVEDARILPSEMKDCKFSEEKIY 488
D +P +++D E + +
Sbjct: 732 HLLGSDGGAIPDDVRDSVLGELRAH 756
>gi|15904041|ref|NP_359591.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae R6]
gi|421267182|ref|ZP_15718059.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
gi|15459704|gb|AAL00802.1| Class III stress response-related ATPase, truncation [Streptococcus
pneumoniae R6]
gi|395865567|gb|EJG76706.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
Length = 762
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|149012833|ref|ZP_01833778.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147763264|gb|EDK70203.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|116516069|ref|YP_817407.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
gi|116076645|gb|ABJ54365.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|168489268|ref|ZP_02713467.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|221232896|ref|YP_002512050.1| stress response-related Clp ATPase [Streptococcus pneumoniae ATCC
700669]
gi|415701482|ref|ZP_11458391.1| clpC [Streptococcus pneumoniae 459-5]
gi|417680172|ref|ZP_12329565.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|418124567|ref|ZP_12761494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|418129107|ref|ZP_12765996.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|418138308|ref|ZP_12775142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|418179340|ref|ZP_12815917.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|418235382|ref|ZP_12861955.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|419474282|ref|ZP_14014127.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|421279960|ref|ZP_15730763.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|421295104|ref|ZP_15745822.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
gi|183572254|gb|EDT92782.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|220675358|emb|CAR69957.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae ATCC 700669]
gi|332071637|gb|EGI82130.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|353794179|gb|EHD74537.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|353797157|gb|EHD77494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|353840854|gb|EHE20916.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|353885105|gb|EHE64895.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|353899665|gb|EHE75234.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|379549351|gb|EHZ14461.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|381312670|gb|EIC53465.1| clpC [Streptococcus pneumoniae 459-5]
gi|395877188|gb|EJG88258.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|395891461|gb|EJH02456.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|421290761|ref|ZP_15741508.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|421306157|ref|ZP_15756808.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
gi|395885665|gb|EJG96687.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|395903841|gb|EJH14764.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
Length = 810
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|419818004|ref|ZP_14342123.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
gi|404465173|gb|EKA10663.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|419779161|ref|ZP_14305039.1| ATPase, AAA family [Streptococcus oralis SK10]
gi|383186528|gb|EIC78996.1| ATPase, AAA family [Streptococcus oralis SK10]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|256826231|ref|YP_003150191.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
gi|256689624|gb|ACV07426.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
sedentarius DSM 20547]
Length = 866
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I D+AI +SQ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 517 LHKRIVGMDDAIHALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 571
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 572 FLFGDEDALIQLDMS-EFGEKHTVSRMF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 625
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V NSL + ++ G+L DS GR V N I + ++
Sbjct: 626 LFDEVEKAHPDVFNSLLQILEDGRLTDSQGRTVDFKNTIIIMTTNL 671
>gi|401683711|ref|ZP_10815596.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
gi|400186751|gb|EJO20956.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 486
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 487 IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ + + P +NR + + S SE M
Sbjct: 689 MEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|377832293|ref|ZP_09815255.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
gi|377553929|gb|EHT15646.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
Length = 832
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L R L +++ QDEA+S I+++I + R+G +D P R I F F GP GK ++A
Sbjct: 516 LERVLHQRVIGQDEAVSAIARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 570
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G + N I D+ K+ + G + + G + ++ + P
Sbjct: 571 ALAEAMFGSENNMIRVDMS------EYMEKYSVSRLIGAAPGYVGYDEGGQLTEKVRQHP 624
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA V N L + + G L DS GR V N I + S+
Sbjct: 625 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDSKGRRVDFRNTILIMTSNL 674
>gi|417935180|ref|ZP_12578500.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
gi|340771750|gb|EGR94265.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|322375169|ref|ZP_08049683.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
gi|321280669|gb|EFX57708.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|270291875|ref|ZP_06198090.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
gi|270279403|gb|EFA25245.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|421489259|ref|ZP_15936642.1| ATPase, AAA family [Streptococcus oralis SK304]
gi|400366262|gb|EJP19297.1| ATPase, AAA family [Streptococcus oralis SK304]
Length = 810
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINRIDEKVVFHSLDSEHM 723
>gi|363899121|ref|ZP_09325632.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|395209294|ref|ZP_10398388.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
gi|361959451|gb|EHL12738.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|394704925|gb|EJF12454.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
Length = 818
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +SQ I + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 509 LHTRVIGQNEAVHAVSQAIKRGRVGLKD-----PKRPIGSFMFLGPTGVGKTELSKALAE 563
Query: 361 IIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++N I D+ + +PP + VG D G L++ V +
Sbjct: 564 VVFGSEQNLIRVDMSEYMEKYSVSKMIGSPPGY----VGYDE----GGQLSEKVR----R 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
P SV+ + ++KA V N L + + G + DS GR+VS N I + S+ + + P
Sbjct: 612 NPYSVILFDEIEKAHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNVGAEQIMSP 671
Query: 475 SEM----------KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
++ D + + K+ R L +P +NR
Sbjct: 672 KKLGFDSPAGQGDGDYNYMKNKVLEELKR----LFKPEFLNR 709
>gi|148984497|ref|ZP_01817785.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|387758341|ref|YP_006065320.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|418233175|ref|ZP_12859758.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|418236302|ref|ZP_12862870.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|147923274|gb|EDK74388.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|301800930|emb|CBW33589.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|353884753|gb|EHE64548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|353892534|gb|EHE72282.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|429320308|emb|CCP33650.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034183]
gi|429322128|emb|CCP35624.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994039]
gi|429323948|emb|CCP31665.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994038]
Length = 810
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDEESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|306828654|ref|ZP_07461847.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
gi|304429160|gb|EFM32247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
Length = 810
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQELPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S SE M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSEHM 723
>gi|197303865|ref|ZP_03168900.1| hypothetical protein RUMLAC_02603 [Ruminococcus lactaris ATCC
29176]
gi|197297048|gb|EDY31613.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus lactaris ATCC 29176]
Length = 812
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D K L + L +++ QDEA+S +++ + + R G +D P+R I F F GP
Sbjct: 497 DTERLKNLEKILQKRVIGQDEAVSAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 551
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 403
GK +++ ALAE ++G +E I D+ + +PP + GG
Sbjct: 552 GKTELSKALAEALFGKEEAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 603
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L+D V P SV+ + ++KA V N L + + G + DS GR+V SN + +
Sbjct: 604 LSDQVRTH----PYSVLLFDEIEKAHPDVFNVLLQVLDDGHITDSQGRKVDFSNTVIIMT 659
Query: 464 SSFVEDARILPSEM 477
S+ A I P ++
Sbjct: 660 SNAGAKAIIDPKKL 673
>gi|342164860|ref|YP_004769499.1| ATPase [Streptococcus pseudopneumoniae IS7493]
gi|341934742|gb|AEL11639.1| ATPase [Streptococcus pseudopneumoniae IS7493]
Length = 810
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEQVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S +S+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSVSRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|240142554|ref|YP_002967067.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
gi|240012501|gb|ACS43726.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
Length = 964
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAIIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K SE + KS L ++L P +NR
Sbjct: 778 RNLKKRGSSEFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|149007762|ref|ZP_01831371.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|418113531|ref|ZP_12750527.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|419467871|ref|ZP_14007749.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|419513586|ref|ZP_14053216.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|419517799|ref|ZP_14057411.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|421284339|ref|ZP_15735121.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
gi|147760757|gb|EDK67729.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|353781742|gb|EHD62183.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|379542293|gb|EHZ07451.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|379632873|gb|EHZ97443.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|379637449|gb|EIA02005.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|395879353|gb|EJG90413.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAFRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|417677915|ref|ZP_12327318.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|418156168|ref|ZP_12792889.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|418226569|ref|ZP_12853193.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
gi|332071276|gb|EGI81771.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|353818357|gb|EHD98556.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|353879209|gb|EHE59036.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATAFRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|307710307|ref|ZP_07646748.1| clpC [Streptococcus mitis SK564]
gi|307618899|gb|EFN98034.1| clpC [Streptococcus mitis SK564]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S +S+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSVSRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|383937727|ref|ZP_09990969.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
gi|418973172|ref|ZP_13521195.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383350169|gb|EID28063.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715378|gb|EID71342.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEQVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S +S+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSVSRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|406669840|ref|ZP_11077103.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
gi|405581810|gb|EKB55819.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
Length = 832
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 289 QFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFT 344
Q DL+ + L L E++ QDEA+S +S+ I + +G ++ P R I F F
Sbjct: 514 QMDLAESQRLINLEAELHERVIGQDEAVSAVSRAIRRAYSGLKN-----PNRPIGSFLFL 568
Query: 345 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQ 398
GP GK ++A ALA I+G ++N I D+ + + +PP + VG D
Sbjct: 569 GPTGVGKTELAKALAATIFGSEDNMIRVDMSEYMEKHSVSRLVGSPPGY----VGYDE-- 622
Query: 399 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 458
A + ++ KP SV+ L+ V+KA V N L +A G + D GR V N
Sbjct: 623 ------AGQLTEKVRNKPYSVILLDEVEKAHPDVFNILLQAFDDGHMTDGKGRRVDFRNT 676
Query: 459 IFVTASSF 466
IF+ S+
Sbjct: 677 IFIMTSNL 684
>gi|419535697|ref|ZP_14075191.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
gi|379561837|gb|EHZ26852.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
Length = 795
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 448 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 494
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 495 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 548
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 549 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 602
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 603 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 662
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 663 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 693
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 263 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRA---LTEKIDWQDEAISVISQT 319
SATV+ + ++ +S++ P + S+ L R L ++I Q++A+ IS+
Sbjct: 471 TSATVDADLIAEVL-ASATGIPIFKLTEEESSR--LLRMEDELHKRIIGQNDAVKSISRA 527
Query: 320 IAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQD 378
I + R G +D P+R F F GP GK ++A ALAE ++G +++ I D+
Sbjct: 528 IRRTRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALAEFLFGDEDSLISLDMSEYS 582
Query: 379 GE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHV 432
+ +PP + GG + ++ +KP SVV + V+KA +
Sbjct: 583 EKHTVSRLFGSPPGYVGYEEGGQ------------LTEKVRRKPFSVVLFDEVEKAHSDI 630
Query: 433 QNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
NSL + ++ G+L DS GREV N I + ++
Sbjct: 631 FNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|385261014|ref|ZP_10039147.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
gi|385189600|gb|EIF37062.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
Length = 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KD+ E S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDVVEESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|422012810|ref|ZP_16359452.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
gi|394752669|gb|EJF36341.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
Length = 822
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 263 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 322
+ + I+ LA S+ L Q + S + L +++ QDEA+ +SQ+I +
Sbjct: 479 IAEVTDHEIAEVLAMSTGIPVVRL-TQTETSKLLRMEDELHKRVIGQDEAVKALSQSIRR 537
Query: 323 RRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE 380
R+G +D + G S F F GP GK ++A ALAE ++G ++ I D+ + E
Sbjct: 538 TRSGLKDPNRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSE 590
Query: 381 MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAI 440
+ + + G + G + ++ +KP SVV + V+KA + NSL + +
Sbjct: 591 KHTASRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL 645
Query: 441 QTGKLPDSYGREVSVSNAIFVTASSF 466
+ G+L DS GR+V N + + ++
Sbjct: 646 EEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
Length = 858
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA++ ++ + + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 565 LHERVIGQDEAVNAVTDAVIRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 619
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN I D+ + + PP + VG D G L + V +
Sbjct: 620 SLFDSEENMIRIDMSEYMEKHTVARLIGAPPGY----VGYDE----GGQLTEAVR----R 667
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ + ++KA V N L + + G+L DS+GR V N I + S+
Sbjct: 668 KPYSVLLFDEIEKAHYDVFNVLLQILDDGRLTDSHGRTVDFKNTIIIMTSNL 719
>gi|168494045|ref|ZP_02718188.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|418079648|ref|ZP_12716867.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|418081852|ref|ZP_12719058.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|418090572|ref|ZP_12727722.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|418099535|ref|ZP_12736628.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|418106335|ref|ZP_12743385.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|418115713|ref|ZP_12752696.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|418117883|ref|ZP_12754849.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|418135979|ref|ZP_12772828.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|418174625|ref|ZP_12811231.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|419434821|ref|ZP_13974935.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|419441395|ref|ZP_13981435.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
gi|419465504|ref|ZP_14005392.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|183575907|gb|EDT96435.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|353745391|gb|EHD26061.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|353750174|gb|EHD30816.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|353759572|gb|EHD40156.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|353767755|gb|EHD48287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|353774297|gb|EHD54790.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|353783676|gb|EHD64103.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|353787084|gb|EHD67493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|353834711|gb|EHE14809.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|353899826|gb|EHE75393.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|379535630|gb|EHZ00828.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|379575063|gb|EHZ40000.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|379576052|gb|EHZ40981.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
Length = 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 708
>gi|260906427|ref|ZP_05914749.1| ATPase [Brevibacterium linens BL2]
Length = 850
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ IS+ I + R G +D P+R F F GP GK ++A AL+E
Sbjct: 510 LHKRIIGQDDAVKSISRAIRRTRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALSE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDSLISLDMS-EYSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GREV N I + ++
Sbjct: 619 LFDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|343526449|ref|ZP_08763399.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343394400|gb|EGV06948.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 809
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|309799549|ref|ZP_07693778.1| ClpC [Streptococcus infantis SK1302]
gi|308116825|gb|EFO54272.1| ClpC [Streptococcus infantis SK1302]
Length = 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KD+ E S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDVVEESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|423069576|ref|ZP_17058362.1| hypothetical protein HMPREF9682_01583 [Streptococcus intermedius
F0395]
gi|355364253|gb|EHG11986.1| hypothetical protein HMPREF9682_01583 [Streptococcus intermedius
F0395]
Length = 809
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|421282187|ref|ZP_15732980.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
gi|395878634|gb|EJG89697.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
Length = 804
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 457 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 503
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 504 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 557
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 558 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 611
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 612 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 671
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 672 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 702
>gi|419781955|ref|ZP_14307766.1| ATPase, AAA family [Streptococcus oralis SK610]
gi|383183596|gb|EIC76131.1| ATPase, AAA family [Streptococcus oralis SK610]
Length = 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S+ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQELPVYKDLVTESEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|147865471|emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]
Length = 828
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG----ASPRRDIWFNFT 344
+ + N TL AL +K+ WQ + I I+ TI Q R+G G + + + WF F
Sbjct: 577 ELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQ 636
Query: 345 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 404
G D+ K KIA LA +++G + NF+ L + + R K
Sbjct: 637 GVDMDAKEKIARELARLVFGSQNNFVSIAL-----------SSFSSTRADSTEDLRNKRS 685
Query: 405 ADYVAWELLKK--------PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 456
D + +++ P V E+V++AD Q + +A + G++ +S G E+S+S
Sbjct: 686 RDEQSCSYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISLS 745
Query: 457 NAIFV-TASSFVEDAR 471
+AI + + SF +R
Sbjct: 746 DAIIILSCESFSSRSR 761
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 22 GGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKT 81
GG + ++ C CS E E A S T + +D S LP+WLQ + D NK L +
Sbjct: 394 GGAEKQLTCCADCSANFENE--ARSIPTSTCN-SDSTTSTLPTWLQQYK-DENKKLS-RN 448
Query: 82 KEDGLALRSKITKKWDDICQSLHR 105
+D +A+R + KKW+ IC S H+
Sbjct: 449 DQDCVAVRD-LCKKWNSICSSAHK 471
>gi|255326112|ref|ZP_05367199.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
gi|255296823|gb|EET76153.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
Length = 851
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 250 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
K+ E++ G TV + +++ +S+ + + S T+ + L +++ Q
Sbjct: 464 KEEAEKAWREGGDAFGTVTPEVISEVLAASTGVPVYKITEEESSRLLTMEQELHKRVIGQ 523
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+ AI+ +S+ I + R G +D PRR F F GP GK ++A ALAE ++G +++
Sbjct: 524 EHAIAALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDS 578
Query: 369 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V +KP SVV
Sbjct: 579 LITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RKPFSVVLF 626
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 DEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 670
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + + L L +++ Q EA+ IS+ I + R G +D P+R I F F GP
Sbjct: 494 AQAESAKLLNLEEELHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGP 548
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE+++G ++ I D+ + + +PP + VG D
Sbjct: 549 TGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD---- 600
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
G L + V +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 601 GGQLTEKVR----RKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVV 656
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 657 IMTSNVGADA 666
>gi|392427998|ref|YP_006469009.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
intermedius JTH08]
gi|419777058|ref|ZP_14302976.1| Clp amino terminal domain protein [Streptococcus intermedius SK54]
gi|383845269|gb|EID82673.1| Clp amino terminal domain protein [Streptococcus intermedius SK54]
gi|391757144|dbj|BAM22761.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
intermedius JTH08]
Length = 809
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|354807343|ref|ZP_09040813.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
curvatus CRL 705]
gi|354514147|gb|EHE86124.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
curvatus CRL 705]
Length = 821
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S+ I + R+G +D P+R I F F GP GK ++A
Sbjct: 511 LEKVLHKRVVGQEEAISAVSRAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAK 565
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ ++ + G + + G + ++ KP
Sbjct: 566 ALAEAMFGSEDNLIRVDMS------EYMERYSTSRLVGAAPGYVGYEEGGQLTEKVRNKP 619
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ + V+KA + N L + + G L DS GR+V N I + S+
Sbjct: 620 YSVILFDEVEKAHPDIFNILLQVLDDGYLTDSKGRKVDFRNTIMIMTSNL 669
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 240 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 299
T E KE K+ +E + E + G ++LAQ+ S LN + L N
Sbjct: 457 TKKEWKEKQGKEESEVTVEDIAKVVSMWTGIPVSKLAQTESDKL--LNLESILHN----- 509
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
++ Q+EA++ IS+ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 510 -----RVIGQNEAVTSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 559
Query: 359 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
AE ++G +E I D+ + +PP + GG + ++
Sbjct: 560 AESMFGDEEAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQ------------LTEKV 607
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 608 RRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNV 661
>gi|384917654|ref|ZP_10017769.1| ATPase [Citreicella sp. 357]
gi|384468463|gb|EIE52893.1| ATPase [Citreicella sp. 357]
Length = 952
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEAI+ ++ + R G + G++P F F GP GK ++A ALAE
Sbjct: 604 LHERVIGQDEAIASVADAVRLARAGLRE--GSAP--TATFLFLGPTGVGKTELAKALAET 659
Query: 362 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+YG ++ I D+ + GE + PP + VG D G L + V +
Sbjct: 660 VYGDEDAMIRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTERVR----R 706
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 707 RPYSVVLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 764
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K E + + L ++L P +NR
Sbjct: 765 RNLKKRGTKEFDESKQRGELMEVLRRHFRPEFINR 799
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ ++Q + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 529 LHQRVIGQDEAVKAVAQAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 583
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + + +PP + VG D G L + V +
Sbjct: 584 ALFGSEEALIRLDMSEYMEKHAVARMIGSPPGY----VGYDE----GGQLTEKVR----R 631
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SV+ L+ ++KA V N L + ++ G+L D GR V N + + S+ D
Sbjct: 632 KPYSVILLDEIEKAHPDVYNILLQVLEDGRLTDGKGRTVDFRNTVVIMTSNVGAD 686
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 240 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 299
T E KE K+ +E + E + G ++LAQ+ S LN + L N
Sbjct: 456 TKKEWKEKQGKEESEVTVEDIAKVVSMWTGIPVSKLAQTESDKL--LNLEAILHN----- 508
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
++ QDEA++ IS+ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 509 -----RVIGQDEAVTSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 558
Query: 359 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
AE ++G ++ I D+ + +PP + GG + ++
Sbjct: 559 AESMFGDEDAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQ------------LTEKV 606
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 607 RRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNV 660
>gi|88854764|ref|ZP_01129430.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
gi|88815925|gb|EAR25781.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
Length = 825
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSGCCSATV---NGSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K+ + + L Q SG A+ G I+ LA ++ L + + S
Sbjct: 443 AASLRDEEKKLLGERLRLEKQWKSGDVGASGIVDEGLIAEVLAAATGIPVFKLTEE-ESS 501
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
+ +AL ++ Q+EAISV+S+TI + R G +D P R F F GP GK
Sbjct: 502 RLIFMEKALHMRVIGQEEAISVLSKTIRRTRAGLKD-----PNRPSGSFIFAGPTGVGKT 556
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
++A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 557 ELAKALAEFLFDDESAMISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKV 610
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR + N + + ++
Sbjct: 611 RRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNL 664
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + + L L +++ Q EA+ IS+ I + R G +D P+R I F F GP
Sbjct: 494 AQAESAKLLNLEEELHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGP 548
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE+++G ++ I D+ + + +PP + VG D
Sbjct: 549 TGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD---- 600
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
G L + V +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 601 GGQLTEKVR----RKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVV 656
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 657 IMTSNVGADA 666
>gi|417850359|ref|ZP_12496268.1| chaperone protein ClpB [Streptococcus mitis SK1080]
gi|339452754|gb|EGP65376.1| chaperone protein ClpB [Streptococcus mitis SK1080]
Length = 810
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + PI KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPIYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQNQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|225440714|ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vitis vinifera]
Length = 848
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG----ASPRRDIWFNFT 344
+ + N TL AL +K+ WQ + I I+ TI Q R+G G + + + WF F
Sbjct: 597 ELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQ 656
Query: 345 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 404
G D+ K KIA LA +++G + NF+ L + + R K
Sbjct: 657 GVDMDAKEKIARELARLVFGSQNNFVSIALSS-----------FSSTRADSTEDLRNKRS 705
Query: 405 ADYVAWELLKK--------PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 456
D + +++ P V E+V++AD Q + +A + G++ +S G E+S+S
Sbjct: 706 RDEQSCSYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISLS 765
Query: 457 NAIFV-TASSFVEDAR 471
+AI + + SF +R
Sbjct: 766 DAIIILSCESFSSRSR 781
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 22 GGLCQNVSRCQQCSEKCEQEIIASSKGGFTASIADQCQSVLPSWLQMAEPDSNKALDLKT 81
GG + ++ C CS E E A S T + +D S LP+WLQ + D NK L +
Sbjct: 414 GGAEKQLTCCADCSANFENE--ARSIPTSTCN-SDSTTSTLPTWLQQYK-DENKKLS-RN 468
Query: 82 KEDGLALRSKITKKWDDICQSLHR 105
+D +A+R + KKW+ IC S H+
Sbjct: 469 DQDCVAVRD-LCKKWNSICSSAHK 491
>gi|377557267|ref|ZP_09786919.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
gastricus PS3]
gi|376165906|gb|EHS84838.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
gastricus PS3]
Length = 679
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ VIS+ I + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 373 LHQRVIGQDEAVRVISEAIRRSRSGLKD-----PQRPIGSFMFLGPTGVGKTELAKALAE 427
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ ++ + G + + G + ++ + P SVV
Sbjct: 428 EMFGSRDQMIRIDMS------EYMERYSTSRLVGAAPGYVGYEEGGQLTEQVRRHPYSVV 481
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ V+KA V N L + + G L DS GR V N I + S+
Sbjct: 482 LLDEVEKAHPDVFNLLLQVLDDGFLTDSQGRRVDFRNTILIMTSNL 527
>gi|423071440|ref|ZP_17060214.1| hypothetical protein HMPREF9177_01531 [Streptococcus intermedius
F0413]
gi|355363914|gb|EHG11649.1| hypothetical protein HMPREF9177_01531 [Streptococcus intermedius
F0413]
Length = 809
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFLFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831]
gi|54035854|sp|Q8EU05.1|CLPB_OCEIH RecName: Full=Chaperone protein ClpB
gi|22775771|dbj|BAC12049.1| ATP-dependent Clp protease (ATP-binding subunit) [Oceanobacillus
iheyensis HTE831]
Length = 809
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 40/224 (17%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L +++ Q EA++ +++ I + R G +D P+R I F F GP GK ++A AL
Sbjct: 507 KILHDRVIGQSEAVNAVAKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 561
Query: 359 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
AE+++ ++ I D+ + +PP + VG D G L + V
Sbjct: 562 AEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGY----VGYDE----GGQLTEKVR--- 610
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI 472
+KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+ +
Sbjct: 611 -RKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSN------V 663
Query: 473 LPSEMKDCKF------SEEKIYR-AKSRLTQIL---IEPALVNR 506
SE+K K+ +EEK Y+ KS++ + L P +NR
Sbjct: 664 GASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNR 707
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHERVIGQNEAVLAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 564 VMFGDEDAMIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVMIMTSNV 663
>gi|160871680|ref|ZP_02061812.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|160872386|ref|ZP_02062518.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159120479|gb|EDP45817.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
gi|159121185|gb|EDP46523.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
Length = 868
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL +++ QDEAISV++ I + R G D P R I F F+GP GK ++ ALA
Sbjct: 567 ALHKRVVGQDEAISVVANAIRRSRAGLSD-----PNRPIGSFIFSGPTGVGKTEVCKALA 621
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
++ E + D+ + + PP + GG Y+ +
Sbjct: 622 GFLFDSDEAMVRLDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVR 669
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SVV L+ ++KA V N L + ++ G+L DS+GR V N + V S+ ++I+
Sbjct: 670 RKPYSVVLLDEIEKAHADVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL--GSQII 727
Query: 474 PSEMKDCKFSEEKIYRA-KSRLTQILIE---PALVNR 506
+F+ ++ Y A KS L I+ + P +NR
Sbjct: 728 Q------EFTSKQDYAALKSTLMDIIAQHFRPEFINR 758
>gi|418963557|ref|ZP_13515394.1| Clp amino terminal domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343153|gb|EID21348.1| Clp amino terminal domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 809
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|331267290|ref|YP_004326920.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
gi|326683962|emb|CBZ01580.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
Length = 810
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAANRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|385261591|ref|ZP_10039711.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
gi|385192794|gb|EIF40189.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
Length = 810
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINR 708
>gi|335356603|ref|ZP_08548473.1| negative regulator of genetic competence [Lactobacillus animalis
KCTC 3501]
Length = 830
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEAIS I++ I + R+G D P R I F F GP GK ++A
Sbjct: 513 LEKILHQRVVGQDEAISSIAKAIRRSRSGLSD-----PTRPIGSFMFLGPTGVGKTELAK 567
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + PP + VG D G L++ V
Sbjct: 568 ALAEAMFGSEDAMIRVDMSEYMEKYSTSRLVGAPPGY----VGYDE----GGQLSEKVR- 618
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 619 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 671
>gi|307707859|ref|ZP_07644336.1| ClpC [Streptococcus mitis NCTC 12261]
gi|307616119|gb|EFN95315.1| ClpC [Streptococcus mitis NCTC 12261]
Length = 810
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S S+ M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSDHM 723
>gi|356498707|ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807485 [Glycine max]
Length = 867
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR------RDIWFN 342
+ + N KTL AL +K+ WQ + I I+ T+ Q R+G G R + W
Sbjct: 609 ELNTENLKTLCNALEKKVPWQKDIIPEIASTLLQCRSGMVRRKGKVMRNSEEVKEETWLF 668
Query: 343 FTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGK 402
F G D+ K KIA LA +++G + + + L + + Y + + + R +
Sbjct: 669 FQGVDVEAKEKIARELARLVFGSQNDVVSIALSTFASTRADSTEDYSR-----NKRSREE 723
Query: 403 TLADYV---AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAI 459
T Y+ A + P V +E++++AD Q +AI+ G++ DS G EV++ +AI
Sbjct: 724 TSCSYIERFAEAMACNPHRVFLVEDIEQADYCSQLGFKRAIERGRVADSKGEEVALCDAI 783
Query: 460 FV-TASSFVEDARILPSEMKDCKFSEEK 486
+ + SF +R +K +EE+
Sbjct: 784 IILSCESFSSRSRACSPSVKQKPLTEEE 811
>gi|365905486|ref|ZP_09443245.1| Clp protease/DnaK/DnaJ chaperone ATP-binding subunit [Lactobacillus
versmoldensis KCTC 3814]
Length = 835
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q++AIS +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 511 LEKELHKRVIGQNDAISAVSRAIRRARSGMKD-----PDRPIGSFMFLGPTGVGKTELAK 565
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQF-RGKTLADYVAWELLKK 415
++AE+++G ++N I D+ + E + K G V F G L + V E
Sbjct: 566 SIAEVMFGSEDNLIRVDMS-EYMEQYSTSKLIGSAPG--YVGFDEGGQLTEKVRNE---- 618
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDAR 471
P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+ VED R
Sbjct: 619 PYSVILLDEVEKAHPDVFNILLQVLDDGILTDAKGRKVDFRNTIIIMTSNLGARSVEDDR 678
Query: 472 ILPSEMKDCKFSEEKIY-RAKSRLTQILIEPALVNR 506
+ KD + +++ R S L + P +NR
Sbjct: 679 SVGFGAKDARTDYKEMQSRINSELKK-FFRPEFLNR 713
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 562 VMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD----GGQLTEKVR----R 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADA 665
>gi|307711182|ref|ZP_07647604.1| clpC [Streptococcus mitis SK321]
gi|307617144|gb|EFN96322.1| clpC [Streptococcus mitis SK321]
Length = 810
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S S+ M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDSDHM 723
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 561 VMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD----GGQLTEKVR----R 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 609 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADA 664
>gi|340793465|ref|YP_004758928.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
gi|340533375|gb|AEK35855.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
Length = 874
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E+I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 530 LHERIIGQEDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 584
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 585 FLFGDEDSLISIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 638
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 639 LFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 684
>gi|424786948|ref|ZP_18213719.1| istB-like ATP binding family protein [Streptococcus intermedius
BA1]
gi|422114199|gb|EKU17906.1| istB-like ATP binding family protein [Streptococcus intermedius
BA1]
Length = 809
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFLFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSEDM 722
>gi|403737328|ref|ZP_10950162.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
gi|403192628|dbj|GAB76932.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
Length = 870
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I D+AI +SQ+I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 514 LHKRIVGMDDAIKALSQSIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 569 FLFGDEDSLITLDMS-EFAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 623 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVILMTTNL 668
>gi|419443598|ref|ZP_13983618.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
gi|379549149|gb|EHZ14260.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
Length = 810
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EALFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHM 723
>gi|414157618|ref|ZP_11413915.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
gi|410872054|gb|EKS19999.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
Length = 810
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL ++ L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVTETEILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
KD +F +E + + + P +NR
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKAYRPEFINR 708
>gi|373463300|ref|ZP_09554927.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
kisonensis F0435]
gi|371764988|gb|EHO53353.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
kisonensis F0435]
Length = 830
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 26/198 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A
Sbjct: 514 LEKVLHKRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 568
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
A+AE ++G +++ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEDDMIRVDMS------EFMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF---------- 466
SVV + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNLGATTLRDKKT 682
Query: 467 ----VEDARILPSEMKDC 480
EDA+ SEMKD
Sbjct: 683 VGFGQEDAKEGYSEMKDT 700
>gi|213965131|ref|ZP_03393329.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
gi|213952245|gb|EEB63629.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
Length = 910
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+S +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 522 LHKRIIGQEEAVSAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 576
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 577 FLFGEEDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 630
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L DS GR V N + + S+
Sbjct: 631 LFDEIEKAHKEIYNTLLQVLEDGRLTDSQGRVVDFKNTVLIFTSNL 676
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 27/186 (14%)
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 350
L N ++L + ++ QDEA+ +S+ + + R G +D P+R I F F GP G
Sbjct: 501 LLNMESLLHS---RVIGQDEAVKAVSKAVRRARAGLKD-----PKRPIGSFIFLGPTGVG 552
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTL 404
K ++A ALAE I+G ++ I D+ + + +PP + VG D G L
Sbjct: 553 KTELARALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQL 604
Query: 405 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 464
+ V +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S
Sbjct: 605 TEKVR----RKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTLVIMTS 660
Query: 465 SFVEDA 470
+ DA
Sbjct: 661 NVGADA 666
>gi|297834932|ref|XP_002885348.1| hypothetical protein ARALYDRAFT_898394 [Arabidopsis lyrata subsp.
lyrata]
gi|297331188|gb|EFH61607.1| hypothetical protein ARALYDRAFT_898394 [Arabidopsis lyrata subsp.
lyrata]
Length = 701
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
N L L E++ QDEA++V++ +I + RTG SP + I F F GP GK
Sbjct: 392 NLIGLAEKLHERVVGQDEAVNVVADSILRSRTGI-----GSPGKPIGSFLFLGPTGVGKT 446
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 406
++A A+AEI++ G++ I D+ E + PP + VG + +G L D
Sbjct: 447 ELAKAVAEILFQGEKGLIRIDMTEYMEEHTVSRLIGAPPGY----VGYE----KGGQLTD 498
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V K+P V+ L+ +KA V N+L + G+L D G+ V NA+ + S+
Sbjct: 499 AVR----KRPYCVILLDEAEKAHTAVFNTLLQVFDDGRLTDGQGQTVDFKNAVIIMTSNL 554
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 240 TSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLF 299
T E KE K+ +E + E + G ++LAQ+ + L N +++
Sbjct: 458 TKKEWKERQGKENSEVTTEDIALVVSAWTGVPVSKLAQAETDR---------LLNMESI- 507
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
L ++ Q+EA+ I++ I + R+G +D P+R I F F GP GK ++A AL
Sbjct: 508 --LHSRVIGQEEAVKAIAKAIRRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 560
Query: 359 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
AE ++G ++ I D+ + + +PP + GG + ++
Sbjct: 561 AEAMFGDEDALIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQ------------LTEKV 608
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI 472
+KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I + S+ +
Sbjct: 609 RRKPFSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSN------V 662
Query: 473 LPSEMKDCKF 482
SE+K K+
Sbjct: 663 GASELKRNKY 672
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 562 VMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGY----VGFDD----GGQLTEKVR----R 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADA 665
>gi|358465211|ref|ZP_09175162.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357065969|gb|EHI76139.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 810
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 17/275 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 486
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 487 IYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ + + P +NR + + S S+ M
Sbjct: 689 MEKRIFEELKKAYRPEFINRIDEKVVFHSLDSDHM 723
>gi|365902518|ref|ZP_09440341.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus malefermentans KCTC 3548]
Length = 832
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+S +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHKRVIGQEEAVSAVSRAIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++N I D+ K+ + G + + G + ++ +KP SVV
Sbjct: 571 AMFGSEDNMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVV 624
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V N L + + G L DS GR V N I + S+
Sbjct: 625 LFDEVEKAHPDVFNILLQVLDDGFLTDSKGRRVDFRNTILIMTSNL 670
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ QDEA+ +S+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETDKLLKLEEILHSRVIGQDEAVKAVSKAVRRARAGLKD-----PKRPIGSFVFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G +E+ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAESMFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 461 VTASSF 466
+ S+
Sbjct: 655 IMTSNV 660
>gi|417793983|ref|ZP_12441246.1| chaperone protein ClpB [Streptococcus oralis SK255]
gi|334271093|gb|EGL89487.1| chaperone protein ClpB [Streptococcus oralis SK255]
Length = 810
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 17/260 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
L + QEL I L++ S L Q D + L L +++ QD+
Sbjct: 461 LIAKEQELPVYKDLVTESDILTTLSRLSGIPVQKL-TQTDAKKYLNLEAELHKRVIGQDQ 519
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
A+S IS+ I + ++G H +R I F F GP GK ++A ALAE+++ + I
Sbjct: 520 AVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALI 574
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ KF + G + G + ++ KP SV+ + V+KA
Sbjct: 575 RFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHP 628
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEK 486
+ N L + + G L DS GR+V SN I + S+ + D + + KD +F +E
Sbjct: 629 DIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQEN 688
Query: 487 IYRAKSRLTQILIEPALVNR 506
+ + + P +NR
Sbjct: 689 MEKRIFEELKKAYRPEFINR 708
>gi|421894145|ref|ZP_16324636.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
pentosaceus IE-3]
gi|385272973|emb|CCG90008.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
pentosaceus IE-3]
Length = 821
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 239 PTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTL 298
P +NE K+ L E ++++ S G Q+ QS S +L
Sbjct: 465 PETNEAKKDYK--LIENGEDIAQIVS-DWTGVPLTQMKQSESDRLINLE----------- 510
Query: 299 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 357
+ L E++ Q+EA+S +++ I + R+G + SP+R I F F GP GK ++A +
Sbjct: 511 -KTLHERVIGQEEAVSSVARAIRRARSGLK-----SPKRPIGSFMFLGPTGVGKTELAKS 564
Query: 358 LAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
LA+I++G ++N I D+ ++ + G + + G + ++ +KP
Sbjct: 565 LADIMFGSEDNMIRIDMS------EYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPY 618
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + V+KA V N L + G L DS GR V N I + S+
Sbjct: 619 SVVLFDEVEKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|328542274|ref|YP_004302383.1| ATPase AAA [Polymorphum gilvum SL003B-26A1]
gi|326412023|gb|ADZ69086.1| ATPase AAA-2 domain protein [Polymorphum gilvum SL003B-26A1]
Length = 968
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAIIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K E + KS L ++L P +NR
Sbjct: 778 RNLKKRGTKEFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|421490666|ref|ZP_15938035.1| Clp amino terminal domain protein [Streptococcus anginosus SK1138]
gi|400372563|gb|EJP25505.1| Clp amino terminal domain protein [Streptococcus anginosus SK1138]
Length = 809
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|389862461|ref|YP_006364701.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
gi|388484664|emb|CCH86202.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
Length = 847
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EAI +SQ I + R G +D PRR F F GP GK ++A ALA+
Sbjct: 510 LHKRIIGQEEAIKSVSQAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELAKALAQ 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 565 FLFGEDDALIQIDM----GEFHD--KFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N+L + ++ G+L D GR V N I + ++
Sbjct: 619 LFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|379734094|ref|YP_005327599.1| putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
gi|378781900|emb|CCG01552.1| Putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
Length = 842
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EAI +SQ I + R G +D PRR F F GP GK ++A ALA+
Sbjct: 510 LHKRIIGQEEAIKSVSQAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELAKALAQ 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 565 FLFGEDDALIQIDM----GEFHD--KFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N+L + ++ G+L D GR V N I + ++
Sbjct: 619 LFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
AL E++ QDEAI ++ I + R G D + R + F F GP GK ++ ALAE
Sbjct: 566 ALHERVVGQDEAIGAVANAIRRSRAGLSDPN----RPNGSFLFLGPTGVGKTELCKALAE 621
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E + D+ + + PP + GG Y+ + +
Sbjct: 622 FLFDTQEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEHVRR 669
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ V+KA V N L + + G+L DS+GR V N + V S+ L
Sbjct: 670 KPYSVILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSN-------LG 722
Query: 475 SEMKDCKFSEEK--IYRAKSRLTQIL---IEPALVNR 506
SE+ EE+ R KS + I+ P +NR
Sbjct: 723 SEVIQTMAGEEEESYQRMKSSVMDIVGTQFRPEFINR 759
>gi|335032301|ref|ZP_08525701.1| chaperone protein ClpB [Streptococcus anginosus SK52 = DSM 20563]
gi|333767305|gb|EGL44555.1| chaperone protein ClpB [Streptococcus anginosus SK52 = DSM 20563]
Length = 809
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|339446255|ref|YP_004712259.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
gi|338906007|dbj|BAK45858.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
Length = 907
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 562 MQGEMAKLIDLEEKLHERVVGQDEAVSAVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 616
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ +++ + D+ KF Q + G + G
Sbjct: 617 TGVGKTELAKALAEYLFDSEKSMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 670
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + +KP SV+ L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 671 QLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 730
>gi|392374710|ref|YP_003206543.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258592403|emb|CBE68712.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 810
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
LT+++ Q EAI +S+ I + R G + SP R + F F GP GK ++A ALAE
Sbjct: 502 LTKRVVGQIEAIESVSRAIRRSRAGIK-----SPSRPVGSFIFLGPTGVGKTELAKALAE 556
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ +F + G + G + + ++ ++P SV+
Sbjct: 557 FLFGTEDALIRVDMS------EYMERFSTSRLIGAPPGYIGYDDSGQLTEKVRRRPFSVI 610
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 480
L+ ++KA V N L + + G+L DSYGR V N I + S+ L + M
Sbjct: 611 LLDEIEKAHPEVFNLLLQIFEDGRLTDSYGRIVDFKNTILIMTSNIGARQIGLHTAMGFA 670
Query: 481 KFSEEKIYRAKSRLTQI-----LIEPALVNR 506
K +E + K R T + + P L+NR
Sbjct: 671 KGGDEAVTYDKMRDTVLGELKRVFNPELLNR 701
>gi|294632198|ref|ZP_06710758.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292835531|gb|EFF93880.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 856
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+SV+++ + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 537 LHERVVGQDEAVSVVAEAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELARALAE 591
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E + D+ E + + G + G A + + + P S++
Sbjct: 592 ALFGSEERMVRLDMSEYQ-ERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 645
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 646 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 695
>gi|400975586|ref|ZP_10802817.1| ATP-dependent Clp protease, ATP-binding subunit [Salinibacterium
sp. PAMC 21357]
Length = 825
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 237 SAPTSNEPKEPISKDLTERSQELSGCCSATV---NGSISNQLAQSSSSSCPDLNCQFDLS 293
+A +E K+ + + L Q SG A+ G I+ LA ++ L + + S
Sbjct: 443 AASLRDEEKKLLGERLRLEKQWKSGDVGASGIVDEGLIAEVLAAATGIPVFKLTEE-ESS 501
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRK 353
+ +AL ++ Q+EA+SV+S+TI + R G +D + S F F GP GK +
Sbjct: 502 RLIFMEKALHMRVIGQEEAVSVLSKTIRRTRAGLKDPNRPSG----SFIFAGPTGVGKTE 557
Query: 354 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
+A ALAE ++ + I D+ + GE + + + G F G + ++
Sbjct: 558 LAKALAEFLFDDENALISLDMS-EYGEKHTVSRLF-----GAPPGFVGFEEGGQLTEKVR 611
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + ++KA + NSL + ++ G+L D GR + N + + ++
Sbjct: 612 RKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNL 664
>gi|389865263|ref|YP_006367504.1| genetic competence negative regulator ClpC/MecB [Modestobacter
marinus]
gi|388487467|emb|CCH89025.1| Negative regulator of genetic competence ClpC/MecB [Modestobacter
marinus]
Length = 851
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ V+++ I + R G D P R I F F GP GK ++A ALAE
Sbjct: 535 LHERVVGQDEAVEVVAEAIRRSRAGLGD-----PDRPIGSFLFLGPTGVGKTELARALAE 589
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ E V G + G A + + ++P SVV
Sbjct: 590 ALFGDSDRMVRLDMS----EFQERHTVSRLV--GSPPGYVGYEDAGQLTEAVRRRPYSVV 643
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
L+ ++KA V N+L + + G+L DS GR V SN + + S+ +A
Sbjct: 644 LLDEIEKAHPDVFNTLLQLLDAGRLTDSQGRTVDFSNTVVIMTSNLGSEA 693
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA++ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 513 LHQRVVGQDEAVAAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 567
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + + PP + VG D G L D V +
Sbjct: 568 AMFGDEDAMVRIDMSEYMEKFAVSRLVGAPPGY----VGYDE----GGQLTDAVR----R 615
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 616 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 666
>gi|194466966|ref|ZP_03072953.1| ATPase AAA-2 domain protein [Lactobacillus reuteri 100-23]
gi|194454002|gb|EDX42899.1| ATPase AAA-2 domain protein [Lactobacillus reuteri 100-23]
Length = 830
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++V+++ I + R+G +D PRR I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVAVVAKAIRRARSGLKD-----PRRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYIGYDEGGQLTEKVRQHP 620
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 472
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|405981990|ref|ZP_11040314.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
gi|404390781|gb|EJZ85847.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
Length = 841
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL ++I QDEA+ +S++I + R G +D P+R F F GP GK ++A ALA
Sbjct: 516 ALHKRIIGQDEAVKALSKSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALA 570
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++G ++ I D+ + GE + + + G + G + ++ ++P SV
Sbjct: 571 EFLFGDEDALIQLDMS-EFGEKHTSSRLF-----GAPPGYVGFDEGGELTEKVRRRPFSV 624
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + V+KA + N+L + ++ G+L DS GR V N + + ++
Sbjct: 625 VLFDEVEKAHPDIFNTLLQILEDGRLTDSQGRLVDFKNTVIIMTTNL 671
>gi|302335816|ref|YP_003801023.1| ATPase AAA-2 domain-containing protein [Olsenella uli DSM 7084]
gi|301319656|gb|ADK68143.1| ATPase AAA-2 domain protein [Olsenella uli DSM 7084]
Length = 761
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL ++ QDEA+SV+S+TI + R G D PRR F F GP GK ++A ALA
Sbjct: 462 ALERRVVGQDEAVSVVSKTIRRVRAGLSD-----PRRPGGSFLFLGPTGVGKTELAKALA 516
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E ++G + + I D+ + + PP + VG D G L V
Sbjct: 517 EFLFGSEGSLITFDMSEYMEKFAVSRLIGAPPGY----VGYDE----GGQLTKAVRLH-- 566
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 464
P SV+ + ++KA V N L + ++ G+L D GR+V+ NAI + S
Sbjct: 567 --PYSVILFDEMEKAHPDVFNILLQVLEEGRLTDGQGRKVNFRNAIVIMTS 615
>gi|298245463|ref|ZP_06969269.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
gi|297552944|gb|EFH86809.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
Length = 746
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
N + L + L + + QDEAIS +++ I + R G +D P+R I F F GP GK
Sbjct: 427 NLRNLEQDLRKHVIGQDEAISAVARAIRRSRAGLKD-----PKRPIGSFLFLGPTGVGKT 481
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAW 410
++A ALA ++GG ++ I D+ E P H V + G + G +
Sbjct: 482 ELAKALAAELFGGADHIIRFDMS----EYMEP----HTVSRLFGSPPGYVGHDEGGQLTE 533
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++ ++P SV+ + V+KA V N+L + + G+L D GR V N + + S+
Sbjct: 534 QVRRRPYSVILFDEVEKAHPEVFNALLQIMDDGRLTDGQGRTVDFKNTVVIMTSN 588
>gi|365926352|ref|ZP_09449115.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 821
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA+S +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 506 LEKVLHKRVIGQDEAVSAVSRAIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 560
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
+LAE+I+G +++ I D+ + + +PP + GG +
Sbjct: 561 SLAEVIFGSEDSMIRIDMSEYMEKYATSRLIGSPPGYVGYEEGGQ------------LTE 608
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ + P SV+ + V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 609 KVRQHPYSVILFDEVEKAHPDVFNILLQVLDDGYLSDSKGRKVDFKNTIIIMTSNL 664
>gi|309789553|ref|ZP_07684134.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG-6]
gi|308228289|gb|EFO81936.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG6]
Length = 859
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA++ +S + + R G +D PRR + F F GP GK ++A ALAE ++
Sbjct: 570 RVIGQDEAVAAVSNAVRRSRAGLQD-----PRRPLGSFLFLGPTGVGKTELARALAEFLF 624
Query: 364 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
++ + D+ + + PP + +G D G L + V +KP
Sbjct: 625 DDEQAMVRIDMSEYMEKHTVARLIGAPPGY----IGYDE----GGQLTEAVR----RKPY 672
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM 477
SVV + ++KA V N L + + G+L D GR V+ N + + S+ A L EM
Sbjct: 673 SVVLFDEIEKAHSDVFNVLLQVLDDGRLTDGQGRVVNFKNVVVIMTSNI---ASGLIQEM 729
Query: 478 KDCKFSEEKIYRAKSRLTQILIEPALVNRSSS----QKLSASETSEGMSHQ-----KLLN 528
SEE I RA + + P +NR + LS + + +S Q KLL
Sbjct: 730 TQDGESEEAIRRAVLGELRDALRPEFLNRIDETIMFRPLSREQIGQIVSIQLAHLDKLLA 789
Query: 529 KRKL 532
+RKL
Sbjct: 790 ERKL 793
>gi|379728103|ref|YP_005320288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Melissococcus
plutonius DAT561]
gi|376319006|dbj|BAL62793.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius DAT561]
Length = 829
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 518 LHKRVVGQNEAVKAVSKAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ N +PP + GG + ++ +
Sbjct: 573 AMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEEGGQ------------LTEKIRQ 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N L + + G L DS GR++ N I + S+
Sbjct: 621 KPYSVVLLDEIEKAHTDVFNMLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNI 672
>gi|297203464|ref|ZP_06920861.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|297148417|gb|EDY60364.2| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 847
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L R L E++ QDEA+ V+S + + R G ASP R I F F GP GK ++A
Sbjct: 538 LERHLHERVVGQDEAVRVVSDAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELAR 592
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G +E + D+ E + + G + G A + + + P
Sbjct: 593 ALAESLFGSEERMVRLDMSEYQ-ERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHP 646
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
S++ L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 647 YSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 700
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 278 SSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
SS + P Q D S L + L E++ QDEA+ +++ I + R G +D P+
Sbjct: 480 SSWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PK 534
Query: 337 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 389
R I F F GP GK ++A ALAE ++G ++ I D+ + +PP +
Sbjct: 535 RPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVG 594
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
GG + ++ +KP SVV L+ ++KA V N L + + G+L D
Sbjct: 595 YEEGGQ------------LTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGK 642
Query: 450 GREVSVSNAIFVTASSF 466
GR V N + + S+
Sbjct: 643 GRTVDFRNTVIIMTSNV 659
>gi|332685809|ref|YP_004455583.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius ATCC 35311]
gi|332369818|dbj|BAK20774.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius ATCC 35311]
Length = 829
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P+R I F F GP GK ++A ALAE
Sbjct: 518 LHKRVVGQNEAVKAVSKAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ N +PP + GG + ++ +
Sbjct: 573 AMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEEGGQ------------LTEKIRQ 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N L + + G L DS GR++ N I + S+
Sbjct: 621 KPYSVVLLDEIEKAHTDVFNMLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNI 672
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 278 SSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
SS + P Q D S L + L E++ QDEA+ +++ I + R G +D P+
Sbjct: 480 SSWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PK 534
Query: 337 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 389
R I F F GP GK ++A ALAE ++G ++ I D+ + +PP +
Sbjct: 535 RPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVG 594
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
GG + ++ +KP SVV L+ ++KA V N L + + G+L D
Sbjct: 595 YEEGGQ------------LTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGK 642
Query: 450 GREVSVSNAIFVTASSF 466
GR V N + + S+
Sbjct: 643 GRTVDFRNTVIIMTSNV 659
>gi|326520325|dbj|BAK07421.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 431
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTG----HEDHHGASPRRDIWFNFT 344
+ + N K L AL +++ WQ E + I+ T+ Q R+G + + + W F
Sbjct: 177 ELNAENLKLLCAALEKEVPWQKEIVPEIASTVLQCRSGIAKRRDKSRSTDAKEETWMFFL 236
Query: 345 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTL 404
G D GK ++A LA +++G ++NF+ L + + + S G+
Sbjct: 237 GGDADGKERVASELANLVFGSRKNFVSIKLGASSTSASCSTEEHRSKRPRTSTASEGEAY 296
Query: 405 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV-TA 463
+ + + + P V+ ++N ++AD + Q + +AI +G + G EV VS+AI +
Sbjct: 297 LERLYDAVSENPHRVILMDNFEQADQYCQVGIKEAIDSGVIRSQTGDEVGVSDAIVILCC 356
Query: 464 SSFVEDARILPSEMK 478
SF +R S K
Sbjct: 357 ESFDSKSRACSSPTK 371
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 278 SSSSSCPDLNCQFDLS-NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
SS + P Q D S L + L E++ QDEA+ +++ I + R G +D P+
Sbjct: 480 SSWTGIPVQQLQQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PK 534
Query: 337 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 389
R I F F GP GK ++A ALAE ++G ++ I D+ + +PP +
Sbjct: 535 RPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVG 594
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
GG + ++ +KP SVV L+ ++KA V N L + + G+L D
Sbjct: 595 YEEGGQ------------LTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGK 642
Query: 450 GREVSVSNAIFVTASSF 466
GR V N + + S+
Sbjct: 643 GRTVDFRNTVIIMTSNV 659
>gi|172041364|ref|YP_001801078.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448824288|ref|YP_007417457.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
gi|171852668|emb|CAQ05644.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448277785|gb|AGE37209.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
Length = 894
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L ++I QD+A+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 525 LHKRIIGQDDAVKAVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 580
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 581 LFGDDDALIQVDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 634
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KAD + N+L + ++ G+L D GR V N + + S+
Sbjct: 635 FDEIEKADKDIYNTLLQVLEEGRLTDGQGRIVDFKNTVLIFTSNL 679
>gi|422324030|ref|ZP_16405067.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
gi|353344624|gb|EHB88930.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
Length = 855
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 250 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
K+ E++ G TV + ++ +S+ + + + T+ + L +++ Q
Sbjct: 464 KEEAEKAWREGGDAFGTVTPEVIAEVLAASTGVPVYKITEEESTRLLTMEQELHKRVIGQ 523
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+ AI+ +S+ I + R G +D PRR F F GP GK ++A ALAE ++G +++
Sbjct: 524 EHAIAALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDS 578
Query: 369 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V +KP SVV
Sbjct: 579 LITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RKPFSVVLF 626
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 DEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 670
>gi|406040493|ref|ZP_11047848.1| putative ATPase with chaperone activity, clpB [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 949
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKETELKQLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 263 CSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQ 322
+ + I+ LA S+ L Q + S + L +++ QDEA+ ++Q+I +
Sbjct: 479 IAEVTDHEIAEVLAMSTGIPVVRL-TQTETSKLLRMEDELHKRVIGQDEAVKALAQSIRR 537
Query: 323 RRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE 380
R+G +D + G S F F GP GK ++A ALAE ++G ++ + D+ + E
Sbjct: 538 TRSGLKDPNRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALVQLDMS-EFSE 590
Query: 381 MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAI 440
+ + + G + G + ++ +KP SVV + V+KA + NSL + +
Sbjct: 591 KHTASRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQIL 645
Query: 441 QTGKLPDSYGREVSVSNAIFVTASSF 466
+ G+L DS GR+V N + + ++
Sbjct: 646 EEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|148998004|ref|ZP_01825517.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147756014|gb|EDK63057.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
Length = 726
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEEEVPVYKDLVTESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKL 512
KD +F +E + + R+ + L L++R+SS L
Sbjct: 678 GAKDIRFDQENM---EKRMFEEL--KKLIDRNSSTVL 709
>gi|283457250|ref|YP_003361820.1| ATPase [Rothia mucilaginosa DY-18]
gi|283133235|dbj|BAI64000.1| ATPase with chaperone activity, ATP-binding subunit [Rothia
mucilaginosa DY-18]
Length = 856
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 250 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
K+ E++ G TV + ++ +S+ + + + T+ + L +++ Q
Sbjct: 464 KEEAEKAWREGGDAFGTVTPEVIAEVLAASTGVPVYKITEEESTRLLTMEQELHKRVIGQ 523
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+ AI+ +S+ I + R G +D PRR F F GP GK ++A ALAE ++G +++
Sbjct: 524 EHAIAALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDS 578
Query: 369 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V +KP SVV
Sbjct: 579 LITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RKPFSVVLF 626
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 DEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 670
>gi|399526611|ref|ZP_10766373.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
gi|398362852|gb|EJN46519.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
Length = 822
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 487 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 545
Query: 331 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 388
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 546 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 598
Query: 389 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 448
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 599 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 653
Query: 449 YGREVSVSNAIFVTASSF 466
GR+V N + + ++
Sbjct: 654 QGRKVDFKNTVIIMTTNL 671
>gi|428776416|ref|YP_007168203.1| ATPase [Halothece sp. PCC 7418]
gi|428690695|gb|AFZ43989.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 798
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E+I Q EA+S +S+ I + R G +D R F F+GP GK ++ ALA+
Sbjct: 484 LHERIIGQSEAVSAVSRAIRRARVGMKD----VDRPIASFIFSGPTGVGKTELTKALAQY 539
Query: 362 IYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G +E I D+ PQ + +PP F GG ++ ++ ++
Sbjct: 540 MFGDEEAMIRLDMSEYMDPQSVSKLIGSPPGFVGYDEGG------------HLTEQVRRR 587
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P +VV L+ ++KA V NSL + + G L DS GR+V N + + S+
Sbjct: 588 PYTVVLLDEIEKAHPDVFNSLLQILDDGHLTDSKGRKVDFKNTLIIMTSNI 638
>gi|399525068|ref|ZP_10765545.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
gi|398373543|gb|EJN51465.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
Length = 822
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 487 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 545
Query: 331 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 388
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 546 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 598
Query: 389 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 448
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 599 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 653
Query: 449 YGREVSVSNAIFVTASSF 466
GR+V N + + ++
Sbjct: 654 QGRKVDFKNTVIIMTTNL 671
>gi|154249061|ref|YP_001409886.1| ATPase [Fervidobacterium nodosum Rt17-B1]
gi|154152997|gb|ABS60229.1| ATPase AAA-2 domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 822
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 24/173 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL E++ QDEAI+ IS+ I + R+G +D PRR + F F GP GK ++A ALA
Sbjct: 512 ALHERVVGQDEAINAISRAIRRARSGLKD-----PRRPVGVFLFLGPTGVGKTELAKALA 566
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E ++G ++ I D+ + + PP + VG + G TL + V
Sbjct: 567 EYLFGDEKALIRFDMSEYMEKFSVSRLIGAPPGY----VGYEE----GGTLTEKVR---- 614
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SV+ + ++KA V N L + + G+L DS G V N I + S+
Sbjct: 615 RRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNI 667
>gi|433457230|ref|ZP_20415238.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432195128|gb|ELK51687.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 812
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ QDEAI ISQ I + R G +D + S F F GP GK ++A ALAE
Sbjct: 490 LHKRVIGQDEAIKAISQAIRRTRAGLKDPNRPSG----SFIFAGPTGVGKTELAKALAEF 545
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 546 LFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVVL 599
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 600 FDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 644
>gi|328954749|ref|YP_004372082.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
gi|328455073|gb|AEB06267.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
Length = 872
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +L KTL L ++ QDEA+S ++ + + R G D P R I F F GP
Sbjct: 556 MQGELEKLKTLESELHRRVIGQDEAVSAVASAVRRSRAGLSD-----PNRPIGSFFFLGP 610
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 611 TGVGKTELAKALAECLFDDERALVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 664
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P SV+ L+ ++KA V N L + + G+L D GR+VS N I + S+
Sbjct: 665 QLTEAIRRRPYSVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRQVSFKNTIVIMTSNV 724
Query: 467 VEDA 470
A
Sbjct: 725 ASTA 728
>gi|308175906|ref|YP_003915312.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
gi|307743369|emb|CBT74341.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
Length = 840
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 310
+++E ++EL A G +L + SS LN + +L ++ QD
Sbjct: 479 EVSEVTEELIAEVLANSTGIPVVKLTEEESSRL--LNMEDELHK----------RVIGQD 526
Query: 311 EAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
AI ISQ I + R G +D + R F F GP GK ++A ALAE ++G +E I
Sbjct: 527 SAIKAISQAIRRTRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEFLFGEEEALI 582
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ + E + + + G + G + ++ ++P SVV + V+KA
Sbjct: 583 TLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHA 636
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ NSL + ++ G+L DS GR V N I + ++
Sbjct: 637 DLFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 672
>gi|341820740|emb|CCC57040.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
thailandensis fsh4-2]
Length = 834
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA+S I+++I + R+G +D P+R I F F GP GK ++A
Sbjct: 519 LEKVLHDRVVGQDEAVSAIARSIRRARSGLKD-----PKRPIGTFLFLGPTGTGKTELAK 573
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ + + G + + G + ++ ++P
Sbjct: 574 ALAEAMFGSEDNMIRVDMS------EYREAYSASRLVGSAPGYVGYEEGGQLTEKVRRQP 627
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 628 YSVVLLDEAEKAHPDIYNLMLQVFDDGFLTDSKGRKVDFRNTIIIMTSNL 677
>gi|153011782|ref|YP_001372995.1| ATPase [Ochrobactrum anthropi ATCC 49188]
gi|151563670|gb|ABS17166.1| ATPase AAA-2 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 964
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGRGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAIIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ SE + KS L ++L P +NR
Sbjct: 778 RNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|424668788|ref|ZP_18105813.1| hypothetical protein A1OC_02385 [Stenotrophomonas maltophilia
Ab55555]
gi|401072124|gb|EJP80633.1| hypothetical protein A1OC_02385 [Stenotrophomonas maltophilia
Ab55555]
Length = 949
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 31/275 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGS-ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRA 301
E KE K L E + SA V ++ +++ + +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIVSRLTGIPVSELTVE-EREKLLHLEQR 610
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERVVGQDEAVRAVADAVRLARAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ R KS + +L P +NR
Sbjct: 772 RRLKARGAAGEEYERTKSEVMDVLRGHFRPEFLNR 806
>gi|396583892|ref|ZP_10484401.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
gi|395548567|gb|EJG15807.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
Length = 822
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 487 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 545
Query: 331 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 388
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 546 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 598
Query: 389 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 448
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 599 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 653
Query: 449 YGREVSVSNAIFVTASSF 466
GR+V N + + ++
Sbjct: 654 QGRKVDFKNTVIIMTTNL 671
>gi|315605228|ref|ZP_07880274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
gi|315313045|gb|EFU61116.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
Length = 826
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 491 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 549
Query: 331 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 388
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 550 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 602
Query: 389 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 448
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 603 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 657
Query: 449 YGREVSVSNAIFVTASSF 466
GR+V N + + ++
Sbjct: 658 QGRKVDFKNTVIIMTTNL 675
>gi|160901847|ref|YP_001567428.1| ATPase [Petrotoga mobilis SJ95]
gi|160359491|gb|ABX31105.1| ATPase AAA-2 domain protein [Petrotoga mobilis SJ95]
Length = 830
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L E++ QDEAI +++ I + R+G +D PRR F F GP GK ++A LA
Sbjct: 511 VLHERVVGQDEAIKSVAKAIRRARSGLKD-----PRRPTGVFMFLGPTGVGKTELAKTLA 565
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
++G + + + D+ + + PP + VG D G L + V
Sbjct: 566 TYLFGNETHLVRIDMSEYMEKFSVSRLVGAPPGY----VGYDE----GGQLTEIVR---- 613
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-------- 465
++P SV+ L+ ++KA V N L + + G+L DS GR V N I + S+
Sbjct: 614 RRPYSVILLDEIEKAHTDVYNILLQIMDEGRLTDSQGRTVDFRNTIIIMTSNLGSEQISK 673
Query: 466 ------FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
FVE+ I SE KD K E++ A + +P +NR
Sbjct: 674 TKRSLGFVEEGTI-ESEYKDIK---EQVMSA----VKAAFKPEFINR 712
>gi|154508516|ref|ZP_02044158.1| hypothetical protein ACTODO_01017 [Actinomyces odontolyticus ATCC
17982]
gi|153798150|gb|EDN80570.1| ATPase family associated with various cellular activities (AAA)
[Actinomyces odontolyticus ATCC 17982]
Length = 826
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 491 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 549
Query: 331 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 388
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 550 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 602
Query: 389 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 448
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 603 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 657
Query: 449 YGREVSVSNAIFVTASSF 466
GR+V N + + ++
Sbjct: 658 QGRKVDFKNTVIIMTTNL 675
>gi|352516241|ref|YP_004885558.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
gi|348600348|dbj|BAK93394.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
Length = 830
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L E++ QDEA++ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 515 LEKDLHERVVGQDEAVNAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 569
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LAE ++G ++ I D+ + + +PP + VG D G L + V
Sbjct: 570 TLAESMFGEEDALIRLDMSEYMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKVR- 620
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ V+KA V N+L + + G+L DS GR V N I + S+
Sbjct: 621 ---SKPYSVILLDEVEKAHPEVFNTLLQVLDDGQLTDSKGRSVDFRNTILIMTSNI 673
>gi|25029085|ref|NP_739139.1| endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens
YS-314]
gi|259505920|ref|ZP_05748822.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium
efficiens YS-314]
gi|259166401|gb|EEW50955.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
Length = 927
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 532 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 586
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 587 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 640
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 686
>gi|336394553|ref|ZP_08575952.1| Clp protease/DnaK/DnaJ chaperone ATP-binding subunit [Lactobacillus
farciminis KCTC 3681]
Length = 833
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QD AIS +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 517 LEKELHKRVIGQDTAISAVSRAIRRARSGMKD-----PNRPIGSFMFLGPTGVGKTELAK 571
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQF-RGKTLADYVAWELLKK 415
++AE+++G ++N I D+ + E + K G V F G L + V E
Sbjct: 572 SIAEVMFGSEDNMIRVDMS-EYMEQYSTSKLIGSAPG--YVGFDEGGQLTEKVRNE---- 624
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPS 475
P SVV L+ V+KA V N L + + G L D+ GR+V N I + S+ AR L +
Sbjct: 625 PYSVVLLDEVEKAHPDVFNILLQVLDDGILTDAKGRKVDFRNTIIIMTSNL--GARAL-N 681
Query: 476 EMKDCKFSEEKIY 488
E K+ F + ++
Sbjct: 682 EDKEVGFGAKDVH 694
>gi|293191197|ref|ZP_06609130.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
gi|292820618|gb|EFF79587.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
Length = 826
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + + + L +++ QDEA+ ++Q+I + R+G +D
Sbjct: 491 IAEVLAMSTGIPVVRL-TQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDP 549
Query: 331 H--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFY 388
+ G S F F GP GK ++A ALAE ++G ++ I D+ + E + + +
Sbjct: 550 NRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-EFSEKHTASRLF 602
Query: 389 HQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDS 448
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 603 -----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDS 657
Query: 449 YGREVSVSNAIFVTASSF 466
GR+V N + + ++
Sbjct: 658 QGRKVDFKNTVIIMTTNL 675
>gi|297171669|gb|ADI22663.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0500_22O06]
Length = 827
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q +L + L ++I Q +AI +S+ I + R G +D PRR I F F+GP
Sbjct: 507 QTELDRLVHMEDELHKRIVGQQDAIEAVSRAIRRSRAGLKD-----PRRPIGSFIFSGPT 561
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++ ALAE ++ E I D+ KF + G + G +
Sbjct: 562 GVGKTELGRALAEFLFADSEALIRIDMS------EYMEKFSVSRLIGAPPGYVGYEDSGA 615
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF- 466
+ + ++P SVV L+ V+KA V N L + + G L D+YGR + N + + S+
Sbjct: 616 LTKAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNLG 675
Query: 467 ---VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ R L ++ D K S E + R + P +NR
Sbjct: 676 ARDISKGRGLGFQIGDAKSSYEVMKDKVQREIERAFNPEFLNR 718
>gi|418965095|ref|ZP_13516881.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383343636|gb|EID21813.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 809
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDVHFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|386838314|ref|YP_006243372.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098615|gb|AEY87499.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791606|gb|AGF61655.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 879
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ M PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLMGAPPGYIGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQVLDDGRITDSQGRTVDFRNTVIIMTSNI 728
>gi|359775853|ref|ZP_09279175.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
gi|359306869|dbj|GAB13004.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
Length = 830
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|116493171|ref|YP_804906.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
gi|116103321|gb|ABJ68464.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
Length = 821
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 239 PTSNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTL 298
P +NE K+ L E ++++ S G Q+ QS S +L
Sbjct: 465 PETNEAKKDYK--LIENGEDIAQIVS-DWTGVPLTQMKQSESDRLINLE----------- 510
Query: 299 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 357
+ L E++ Q EA+S +++ I + R+G + SP+R I F F GP GK ++A +
Sbjct: 511 -KTLHERVIGQKEAVSSVARAIRRARSGLK-----SPKRPIGSFMFLGPTGVGKTELAKS 564
Query: 358 LAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
LA+I++G ++N I D+ ++ + G + + G + ++ +KP
Sbjct: 565 LADIMFGSEDNMIRIDMS------EYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKPY 618
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + V+KA V N L + G L DS GR V N I + S+
Sbjct: 619 SVVLFDEVEKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|298345554|ref|YP_003718241.1| chaperone ATPase [Mobiluncus curtisii ATCC 43063]
gi|304391110|ref|ZP_07373062.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315656114|ref|ZP_07909005.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235615|gb|ADI66747.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
curtisii ATCC 43063]
gi|304325993|gb|EFL93239.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315493116|gb|EFU82716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 884
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 520 LHKRIIGQDEAVKAVSQSIRRTRAGLKD-----PKRPGGSFVFAGPTGVGKTELAKALAE 574
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ + E + + + G + G + ++ +KP SVV
Sbjct: 575 FLFGDENALVQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 628
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 629 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 674
>gi|377574374|ref|ZP_09803404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377536930|dbj|GAB48569.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 880
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I D+AI +SQ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 516 LHKRIVGNDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 571 FLFGDEDALITLDMS-EFAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 624
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 625 LFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 670
>gi|322391259|ref|ZP_08064730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
gi|321145863|gb|EFX41253.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
Length = 819
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
S E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 472 SKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 518
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 519 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 572
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 573 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 626
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 627 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 686
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 687 GAKDIRFDQENMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSQDM 732
>gi|444306034|ref|ZP_21141807.1| ATPase [Arthrobacter sp. SJCon]
gi|443481608|gb|ELT44530.1| ATPase [Arthrobacter sp. SJCon]
Length = 809
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 492 LHKRVVGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 546
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 547 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 600
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 601 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 646
>gi|335998580|ref|ZP_08564491.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
gi|335348435|gb|EGM49941.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
Length = 834
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEAI +S+ I + R+G D P R I F F GP GK ++A
Sbjct: 512 LEKILHKRVVGQDEAIKAVSKAIRRARSGLSD-----PTRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + PP + VG D G L + V
Sbjct: 567 ALAEAMFGSEDAMIRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLTEKVR- 617
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 618 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|409356843|ref|ZP_11235230.1| ATPases with chaperone activity, ATP-binding subunit [Dietzia
alimentaria 72]
Length = 884
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L+++I QDEAI +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 516 LSKRIIGQDEAIKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 570
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 571 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 624
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 625 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 670
>gi|220911112|ref|YP_002486421.1| ATPase AAA [Arthrobacter chlorophenolicus A6]
gi|219857990|gb|ACL38332.1| ATPase AAA-2 domain protein [Arthrobacter chlorophenolicus A6]
Length = 830
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing protein [Nakamurella multipartita
DSM 44233]
gi|258554326|gb|ACV77268.1| ATPase AAA-2 domain protein [Nakamurella multipartita DSM 44233]
Length = 846
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +SQ I + R G +D P+R F F GP GK ++ ALAE
Sbjct: 511 LHKRIIGQDQAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELTKALAE 565
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 566 FLFGDEDALIQVDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + V S+
Sbjct: 620 LFDEIEKAHQDIYNTLLQVLEDGRLTDGQGRTVDFKNTVIVFTSNL 665
>gi|323339619|ref|ZP_08079892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|417974548|ref|ZP_12615358.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
gi|323092944|gb|EFZ35543.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|346329069|gb|EGX97378.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
Length = 834
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEAI +S+ I + R+G D P R I F F GP GK ++A
Sbjct: 512 LEKILHKRVVGQDEAIKAVSKAIRRARSGLSD-----PTRPIGSFMFLGPTGAGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + PP + VG D G L + V
Sbjct: 567 ALAEAMFGSEDAMIRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLTEKVR- 617
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 618 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|395237684|ref|ZP_10415722.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|423351385|ref|ZP_17329036.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
gi|394487003|emb|CCI83810.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|404386569|gb|EJZ81723.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
Length = 925
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L ++I QDEA+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 528 LHKRIIGQDEAVRSVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 583
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 584 LFGEEDALIQIDM----GEFHD--KFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVL 637
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N+L + ++ G+L D GR V N + + S+
Sbjct: 638 FDEIEKAHKEVYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|227547924|ref|ZP_03977973.1| ATP-dependent protease, ATPase subunit, partial [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079998|gb|EEI17961.1| ATP-dependent protease, ATPase subunit [Corynebacterium
lipophiloflavum DSM 44291]
Length = 749
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S++I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 370 LHKRIIGQDEAVRAVSRSIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 424
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 425 FLFGDEDSLIQVDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 478
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G + D GR V N + + S+
Sbjct: 479 LFDEIEKAHKEIYNTLLQVLEEGHVTDGQGRMVDFKNTVLIFTSNL 524
>gi|68535364|ref|YP_250069.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
Length = 885
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 525 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 579
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 580 FLFGDDDALIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 633
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 634 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 679
>gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
gi|258603433|gb|EEW16696.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
Length = 885
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 525 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 579
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 580 FLFGDDDALIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 633
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 634 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 679
>gi|347524765|ref|YP_004831513.1| ATP-binding Clp protease subunit [Lactobacillus ruminis ATCC 27782]
gi|345283724|gb|AEN77577.1| ATP-binding Clp protease subunit [Lactobacillus ruminis ATCC 27782]
Length = 834
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEAI +S+ I + R+G D P R I F F GP GK ++A
Sbjct: 512 LEKILHKRVVGQDEAIKAVSKAIRRARSGLSD-----PTRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + PP + VG D G L + V
Sbjct: 567 ALAEAMFGSEDAMIRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLTEKVR- 617
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ V+KA V N L + + G L DS GR+V+ N I + S+
Sbjct: 618 ---NKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|108803150|ref|YP_643087.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108764393|gb|ABG03275.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 837
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R G +D PRR + F F GP GK ++A LAE
Sbjct: 534 LHERVIGQDEAVRAVAEAIRRARAGIKD-----PRRPVGSFIFLGPTGVGKTELARTLAE 588
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E + D+ + + PP + G A + ++ +
Sbjct: 589 YLFGEEEAMVRIDMSEYQEKHTVSRLVGAPPGYV------------GYEEAGQLTEQIRR 636
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+P SVV + ++KA + N+L + + G+L D+ GR V NA+ + S+
Sbjct: 637 RPYSVVLFDEIEKAHPDIFNTLLQILDDGRLTDAQGRTVDFRNAVIIMTSN 687
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ DA
Sbjct: 609 KPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADA 664
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ DA
Sbjct: 609 KPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADA 664
>gi|315222402|ref|ZP_07864307.1| ATPase family protein [Streptococcus anginosus F0211]
gi|315188563|gb|EFU22273.1| ATPase family protein [Streptococcus anginosus F0211]
Length = 809
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + +D +F E + + + P +NR + + S TSE M
Sbjct: 664 GATSLRDDKTVGFGARDDRFDHENMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSEDM 722
>gi|300742477|ref|ZP_07072498.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
gi|300381662|gb|EFJ78224.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
Length = 850
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD AI +S+ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 515 LHKRVIGQDNAIKALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 569
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + PP + VG D G L + V +
Sbjct: 570 FLFGDEDALITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----R 617
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF--VEDARI 472
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++ + R
Sbjct: 618 KPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDVNRR 677
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 506
+P + + R ++R+ + L E P +NR
Sbjct: 678 VPVGFQAMDHGDADYERMQARVMENLKEHFRPEFLNR 714
>gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 841
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EAI +SQ I + R G +D PRR F F GP GK ++A ALA+
Sbjct: 510 LHKRIIGQEEAIKSVSQAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELAKALAQ 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 565 FLFGEDDALIQIDM----GEFHD--RFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N+L + ++ G+L D GR V N I + ++
Sbjct: 619 LFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNL 664
>gi|311112373|ref|YP_003983595.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
gi|310943867|gb|ADP40161.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
Length = 850
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD AI +S+ I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 515 LHKRVIGQDNAIKALSRAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 569
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + PP + VG D G L + V +
Sbjct: 570 FLFGDEDALITLDMSEYQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----R 617
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF--VEDARI 472
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++ + R
Sbjct: 618 KPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSRDVNRR 677
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 506
+P + + R ++R+ + L E P +NR
Sbjct: 678 VPVGFQAMDHGDADYERMQARVMENLKEHFRPEFLNR 714
>gi|418069700|ref|ZP_12706977.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|427440976|ref|ZP_18925093.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus lolii NGRI 0510Q]
gi|357536231|gb|EHJ20262.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|425787224|dbj|GAC45881.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus lolii NGRI 0510Q]
Length = 823
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 247 PISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKI 306
P+ L E ++++ S G Q+ QS S +L + L E +
Sbjct: 471 PVEYKLQETGEDVAQIVS-DWTGVPVTQMKQSESERLVNLE------------KILHEHV 517
Query: 307 DWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGG 365
QDEA+S +++ I + R+G ++ P+R I F F GP GK ++A LA +++G
Sbjct: 518 IGQDEAVSSVARAIRRARSGLKN-----PKRPIGSFMFLGPTGVGKTELAKTLANVMFGS 572
Query: 366 KENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENV 425
++N I D+ +F + G + + G + ++ +KP SVV + V
Sbjct: 573 EDNMIRIDMS------EYMERFSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEV 626
Query: 426 DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KA V N L + G L DS GR V N I + S+
Sbjct: 627 EKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|385331432|ref|YP_005885383.1| ATPase [Marinobacter adhaerens HP15]
gi|311694582|gb|ADP97455.1| ATPase AAA-2 domain protein [Marinobacter adhaerens HP15]
Length = 912
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA++ +S + R G D RR I F F GP GK ++ ALAE
Sbjct: 604 LHQRVVGQDEAVTAVSDAVRLSRAGLGDR-----RRPIATFFFLGPTGVGKTELTKALAE 658
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + PP + GG + ++ +
Sbjct: 659 TVFGDEEAMIRIDMSEYMERHTVARLIGAPPGYVGHEEGGQ------------LTEKVRR 706
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV L+ +KA + VQN L + + G+L D GR V +N I + S+ D ++
Sbjct: 707 KPYSVVLLDEFEKAHMDVQNVLLQVFEDGRLTDGKGRVVDFTNTIIIATSNIGSD--VIR 764
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
++ + + KS L +L + P +NR
Sbjct: 765 ENIEAPEDKRKDDAELKSELLNVLRRYLRPEFINR 799
>gi|120556300|ref|YP_960651.1| ATPase [Marinobacter aquaeolei VT8]
gi|120326149|gb|ABM20464.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
Length = 949
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKAGGAAGEEYVKTKSEVMDVLRGHFRPEFINR 806
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHERVIGQDEAVKAISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + +PP + GG + ++ +
Sbjct: 562 SLFGDENAVIRIDMSEYMEKHTTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 610 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFKNTVIIMTSNV 661
>gi|304385424|ref|ZP_07367769.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici DSM 20284]
gi|304328631|gb|EFL95852.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici DSM 20284]
Length = 823
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 247 PISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKI 306
P+ L E ++++ S G Q+ QS S +L + L E +
Sbjct: 471 PVEYKLQETGEDVAQIVS-DWTGVPVTQMKQSESERLVNLE------------KILHEHV 517
Query: 307 DWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGG 365
QDEA+S +++ I + R+G ++ P+R I F F GP GK ++A LA +++G
Sbjct: 518 IGQDEAVSSVARAIRRARSGLKN-----PKRPIGSFMFLGPTGVGKTELAKTLANVMFGS 572
Query: 366 KENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENV 425
++N I D+ +F + G + + G + ++ +KP SVV + V
Sbjct: 573 EDNMIRIDMS------EYMERFSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEV 626
Query: 426 DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KA V N L + G L DS GR V N I + S+
Sbjct: 627 EKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 493 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 547
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 548 TGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ----- 602
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 603 -------LTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 655
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 656 IMTSNVGADA 665
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 492 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 602 -------LTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 654
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 655 IMTSNVGADA 664
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 494 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 548
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 549 TGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ----- 603
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 604 -------LTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 656
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 657 IMTSNVGADA 666
>gi|169830395|ref|YP_001716377.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
gi|169637239|gb|ACA58745.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 812
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +S+ I + R G +D PRR I F F GP GK ++A AL E
Sbjct: 510 LHERVVGQDEAVRAVSRAIRRARAGLKD-----PRRPIGSFIFLGPTGVGKTELARALGE 564
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + PP + VG D G L + V +
Sbjct: 565 ALFGDEDALVRIDMSEYQERHTVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 612
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+P +VV L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 613 RPYTVVLLDEIEKAHPEVFNILLQVLEDGRLTDARGRTVDFRNTVIILTSN 663
>gi|443622873|ref|ZP_21107390.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
gi|443343606|gb|ELS57731.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
Length = 849
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ V+S + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 540 LHERVVGQDEAVRVVSDAVLRSRAGL-----ASPNRPIGSFLFLGPTGVGKTELARALAE 594
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E + D+ + E + + G + G A + + + P S++
Sbjct: 595 ALFGSEERMVRLDMS-EYQERHTVSRLI-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 648
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 649 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 698
>gi|406027561|ref|YP_006726393.1| ATPase/chaperone ClpC [Lactobacillus buchneri CD034]
gi|405126050|gb|AFS00811.1| ATPase/chaperone ClpC [Lactobacillus buchneri CD034]
Length = 830
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A
Sbjct: 514 LEKILHKRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 568
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
A+AE ++G +E+ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEEDMIRVDMS------EFMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + V+KA V N L + + G L D+ GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDAKGRKIDFRNTVIIMTSNL 672
>gi|390559270|ref|ZP_10243621.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
gi|390174147|emb|CCF82914.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
Length = 817
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL E+I QDEAI +S+ + + R G +D PRR I F F GP GK +A ALA
Sbjct: 504 ALHERIIGQDEAIETLSKAVRRARAGLKD-----PRRPIGSFIFLGPTGVGKTLLARALA 558
Query: 360 EIIYGGKENFICADLC------PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E I+G +++ I D+ + PP + GG L + V
Sbjct: 559 EFIFGSEDSLIKIDMSEFMERHTVSRLVGAPPGYIGYEEGGQ--------LTEAVH---- 606
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+K SV+ L+ V+KA N L + ++ G L D+ GR V N I V S+
Sbjct: 607 RKSYSVILLDEVEKAHPEAFNMLLQILEDGTLTDAKGRRVDFRNTILVMTSN 658
>gi|270291142|ref|ZP_06197365.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici 7_4]
gi|270280538|gb|EFA26373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici 7_4]
Length = 823
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 247 PISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKI 306
P+ L E ++++ S G Q+ QS S +L + L E +
Sbjct: 471 PVEYKLQETGEDVAQIVS-DWTGVPVTQMKQSESERLVNLE------------KILHEHV 517
Query: 307 DWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGG 365
QDEA+S +++ I + R+G ++ P+R I F F GP GK ++A LA +++G
Sbjct: 518 IGQDEAVSSVARAIRRARSGLKN-----PKRPIGSFMFLGPTGVGKTELAKTLANVMFGS 572
Query: 366 KENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENV 425
++N I D+ +F + G + + G + ++ +KP SVV + V
Sbjct: 573 EDNMIRIDMS------EYMERFSTSRLVGSAPGYVGYDEGGQLTEQVRRKPYSVVLFDEV 626
Query: 426 DKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KA V N L + G L DS GR V N I + S+
Sbjct: 627 EKAHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNL 667
>gi|408528206|emb|CCK26380.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptomyces
davawensis JCM 4913]
Length = 851
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ V+S+ + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 539 LHERVIGQDEAVQVVSEAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELARALAE 593
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E + D+ + E + + G + G A + + + P S++
Sbjct: 594 ALFGSEERMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 647
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
L+ V+KA V N L + + G+L D+ GR V +N + V S+ +A
Sbjct: 648 LLDEVEKAHPDVFNILLQVLDDGRLTDAQGRTVDFTNTVIVMTSNLGSEA 697
>gi|406573371|ref|ZP_11049123.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
gi|404557303|gb|EKA62753.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
Length = 839
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ D+AI +SQ I + R G +D PRR F F GP GK ++A AL+E
Sbjct: 516 LHKRVVGNDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALSE 570
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +++ I D+ + +PP + VG D G L + V +
Sbjct: 571 FLFGDEDSLITLDMSEYSEKHTVSRLFGSPPGY----VGYDE----GGQLTEKVR----R 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 KPFSVVLFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNTVIIMTTNL 670
>gi|418323941|ref|ZP_12935198.1| ATP-dependent chaperone protein ClpB [Staphylococcus pettenkoferi
VCU012]
gi|365228870|gb|EHM70043.1| ATP-dependent chaperone protein ClpB [Staphylococcus pettenkoferi
VCU012]
Length = 870
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++S + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTESVR----R 672
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
P SV+ L+ ++KA V N L + + G+L DS GR V N I + S+ ++IL
Sbjct: 673 NPYSVILLDEIEKAHTDVFNVLLQILDEGRLTDSQGRSVDFKNTIIIMTSNI--GSQILL 730
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSH 523
+KD E +A +P ++NR L + E MSH
Sbjct: 731 ENVKDSGVITEDTEKAVMDSLNAYFKPEILNRMDDIVLFKPLSEEDMSH 779
>gi|293606965|ref|ZP_06689312.1| conserved hypothetical protein, partial [Achromobacter piechaudii
ATCC 43553]
gi|292814697|gb|EFF73831.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 812
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 554 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 611
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 612 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 667
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 668 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 714
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 715 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 772
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 773 QRRLKAGGAAGEEYEKTKSEVMDVLRGHFRPEFINR 808
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHARVVGQDEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ DA
Sbjct: 610 KPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADA 665
>gi|331702088|ref|YP_004399047.1| ATPase AAA-2 domain-containing protein [Lactobacillus buchneri NRRL
B-30929]
gi|329129431|gb|AEB73984.1| ATPase AAA-2 domain protein [Lactobacillus buchneri NRRL B-30929]
Length = 830
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A
Sbjct: 514 LEKILHKRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 568
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
A+AE ++G +E+ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEEDMIRVDMS------EFMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + V+KA V N L + + G L D+ GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDAKGRKIDFRNTVIIMTSNL 672
>gi|254380625|ref|ZP_04995991.1| chaperone protein clpB [Streptomyces sp. Mg1]
gi|194339536|gb|EDX20502.1| chaperone protein clpB [Streptomyces sp. Mg1]
Length = 879
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVTDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ M PP + GG + + +
Sbjct: 629 TLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|419926281|ref|ZP_14444057.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
coli 541-15]
gi|432662900|ref|ZP_19898529.1| hypothetical protein A1WY_04330 [Escherichia coli KTE111]
gi|388383042|gb|EIL44852.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
coli 541-15]
gi|431196732|gb|ELE95642.1| hypothetical protein A1WY_04330 [Escherichia coli KTE111]
Length = 949
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|386703501|ref|YP_006167348.1| chaperone ATPase [Escherichia coli P12b]
gi|432669215|ref|ZP_19904766.1| hypothetical protein A1Y7_00752 [Escherichia coli KTE119]
gi|383101669|gb|AFG39178.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
coli P12b]
gi|431214145|gb|ELF11980.1| hypothetical protein A1Y7_00752 [Escherichia coli KTE119]
Length = 949
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|29833783|ref|NP_828417.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|54035822|sp|Q826F2.1|CLPB2_STRAW RecName: Full=Chaperone protein ClpB 2
gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 879
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVTDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ M PP + GG + + +
Sbjct: 629 TLFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEA------------VRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|319940027|ref|ZP_08014381.1| ATP-dependent Clp proteinase [Streptococcus anginosus 1_2_62CV]
gi|319810741|gb|EFW07068.1| ATP-dependent Clp proteinase [Streptococcus anginosus 1_2_62CV]
Length = 809
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ Q+EAIS IS+ I + ++G + +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIR-----TSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDETALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSE 519
+ D + + +D +F E + + + P +NR + + S TSE
Sbjct: 664 GATSLRDDKTVGFGARDARFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE 720
>gi|295106465|emb|CBL04008.1| ATP-dependent chaperone ClpB [Gordonibacter pamelaeae 7-10-1-b]
Length = 886
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 562 MQGEMAKLVDLEEKLHERVVGQDEAVSSVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 616
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 617 TGVGKTELAKALAEYLFDSERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 670
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + +KP SVV L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 671 QLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 730
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q EA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHKRVVGQGEAVEAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G +++ I D+ + + +PP + VG D G L + V +
Sbjct: 564 VMFGDEDSMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQLTEKVR----R 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + + G+L DS GR V N + + S+ +A
Sbjct: 612 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNIGAEA 667
>gi|302546991|ref|ZP_07299333.1| ATP-dependent chaperone ClpB [Streptomyces hygroscopicus ATCC
53653]
gi|302464609|gb|EFL27702.1| ATP-dependent chaperone ClpB [Streptomyces himastatinicus ATCC
53653]
Length = 887
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++S I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LQERVIGQDEAVKLVSDAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN I D+ + PP + GG + + +
Sbjct: 629 ALFDTEENMIRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLLDEIEKAHTDVFNTLLQVLDDGRITDAQGRLVDFRNTVIIMTSNI 728
>gi|335030235|ref|ZP_08523729.1| chaperone protein ClpB [Streptococcus infantis SK1076]
gi|334266666|gb|EGL85140.1| chaperone protein ClpB [Streptococcus infantis SK1076]
Length = 810
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
S E + P+ KD+ + S L+ ++G +L Q+ + +L +
Sbjct: 463 SKEQEAPVYKDVVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|227522983|ref|ZP_03953032.1| ATP-binding Clp protease subunit [Lactobacillus hilgardii ATCC
8290]
gi|227089801|gb|EEI25113.1| ATP-binding Clp protease subunit [Lactobacillus hilgardii ATCC
8290]
Length = 831
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A A+A
Sbjct: 518 VLHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKAVA 572
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++G +++ I D+ K+ + G + + G + ++ +KP SV
Sbjct: 573 EAVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSV 626
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 627 VLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
>gi|300919756|ref|ZP_07136237.1| ATPase family protein, partial [Escherichia coli MS 115-1]
gi|300413192|gb|EFJ96502.1| ATPase family protein [Escherichia coli MS 115-1]
Length = 905
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVENWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 771 QRRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|227512856|ref|ZP_03942905.1| ATPase/chaperone ClpC [Lactobacillus buchneri ATCC 11577]
gi|227083856|gb|EEI19168.1| ATPase/chaperone ClpC [Lactobacillus buchneri ATCC 11577]
Length = 831
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A A+A
Sbjct: 518 VLHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKAVA 572
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++G +++ I D+ K+ + G + + G + ++ +KP SV
Sbjct: 573 EAVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSV 626
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 627 VLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
>gi|227509922|ref|ZP_03939971.1| ATP-binding Clp protease subunit [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190528|gb|EEI70595.1| ATP-binding Clp protease subunit [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 831
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q+EAIS +S++I + R+G +D P R I F F GP GK ++A A+A
Sbjct: 518 VLHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKAVA 572
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++G +++ I D+ K+ + G + + G + ++ +KP SV
Sbjct: 573 EAVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSV 626
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 627 VLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA++ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHRRVIGQDEAVAAVSRAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + + PP + +G D G L + V +
Sbjct: 564 ALFGQEDAMVRIDMSEYMEKHSVSRLVGAPPGY----IGHDE----GGQLTEAVR----R 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ ++KA+ V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 RPYSVILLDEIEKANPEVFNILLQVLEDGRLTDSKGRTVDFRNTVIIMTSNV 663
>gi|432368279|ref|ZP_19611385.1| hypothetical protein WCM_02222 [Escherichia coli KTE10]
gi|432483994|ref|ZP_19725921.1| hypothetical protein A15Y_00463 [Escherichia coli KTE212]
gi|432532475|ref|ZP_19769481.1| hypothetical protein A193_00923 [Escherichia coli KTE234]
gi|433172104|ref|ZP_20356671.1| hypothetical protein WGQ_00371 [Escherichia coli KTE232]
gi|430889171|gb|ELC11840.1| hypothetical protein WCM_02222 [Escherichia coli KTE10]
gi|431019431|gb|ELD32832.1| hypothetical protein A15Y_00463 [Escherichia coli KTE212]
gi|431064651|gb|ELD73516.1| hypothetical protein A193_00923 [Escherichia coli KTE234]
gi|431696724|gb|ELJ61881.1| hypothetical protein WGQ_00371 [Escherichia coli KTE232]
Length = 960
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|421277771|ref|ZP_15728586.1| exopolyphosphatase [Streptococcus mitis SPAR10]
gi|395873595|gb|EJG84686.1| exopolyphosphatase [Streptococcus mitis SPAR10]
Length = 810
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLETE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSQDM 723
>gi|417938004|ref|ZP_12581303.1| ATPase, AAA family [Streptococcus infantis SK970]
gi|343391645|gb|EGV04219.1| ATPase, AAA family [Streptococcus infantis SK970]
Length = 485
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
S E + P+ KD+ + S L+ ++G +L Q+ + +L +
Sbjct: 204 SKEQEAPVYKDVVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLEAE----------- 250
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 251 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 304
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 305 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 358
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 359 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 418
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 419 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 464
>gi|297171206|gb|ADI22214.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
gi|297171322|gb|ADI22327.1| hypothetical protein [uncultured actinobacterium HF0500_01C15]
Length = 826
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++AI IS+ I + R G +D PRR I F F+GP GK ++A ALAE
Sbjct: 519 LHKRIVGQNDAIEAISRAIRRSRAGLKD-----PRRPIGSFIFSGPTGVGKTELARALAE 573
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ +E + D+ KF + G + G + + + ++P SVV
Sbjct: 574 FLFADREALVRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVV 627
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 628 LLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 673
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHQRVVGQDEAIRAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G ++ + D+ KF + G + G + + ++P +VV
Sbjct: 562 VLFGSEDAMVRIDMS------EYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVV 615
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 616 LLDEIEKAHPDVFNILLQVMEDGRLTDAKGRTVDFRNTVIIMTSN 660
>gi|221065571|ref|ZP_03541676.1| ATPase AAA-2 domain protein [Comamonas testosteroni KF-1]
gi|220710594|gb|EED65962.1| ATPase AAA-2 domain protein [Comamonas testosteroni KF-1]
Length = 951
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAEA 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|227505957|ref|ZP_03936006.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
gi|227197479|gb|EEI77527.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
Length = 904
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 532 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 586
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 587 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 640
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 686
>gi|432529654|ref|ZP_19766702.1| hypothetical protein A191_02904 [Escherichia coli KTE233]
gi|431057350|gb|ELD66801.1| hypothetical protein A191_02904 [Escherichia coli KTE233]
Length = 971
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|399521160|ref|ZP_10761900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110398|emb|CCH38459.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 949
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|417270712|ref|ZP_12058065.1| Clp amino terminal domain protein [Escherichia coli 2.4168]
gi|386237055|gb|EII69027.1| Clp amino terminal domain protein [Escherichia coli 2.4168]
Length = 949
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K ++E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|309810835|ref|ZP_07704636.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
gi|308435141|gb|EFP58972.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
Length = 874
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ D+AI +SQ I + R G +D PRR F F GP GK ++A +LAE
Sbjct: 518 LHKRVIGNDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKSLAE 572
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 573 FLFGDEDALITLDMS-EYAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 626
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 672
>gi|402828693|ref|ZP_10877578.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
gi|402285851|gb|EJU34331.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
Length = 891
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +++ L L E++ QDEA+ ++ I + R G D P R I F F GP
Sbjct: 557 MQGEMAKLIDLEDRLHERVIGQDEAVHAVAGAIRRNRAGLSD-----PNRPIGSFLFLGP 611
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ ++ + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDTEKAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P +VV L+ ++KA V N L + + G+L D GREVS NAI + S+
Sbjct: 666 QLTEAVRRRPYTVVLLDEIEKAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNV 725
>gi|238924658|ref|YP_002938174.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
gi|238876333|gb|ACR76040.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
Length = 818
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+S +++ + + R G +D P++ I F F GP GK +++
Sbjct: 512 LEQILHKRVIGQEEAVSAVAKAVRRGRVGLKD-----PKKPIGSFLFLGPTGVGKTEVSK 566
Query: 357 ALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + +PP + GG ++
Sbjct: 567 ALAEAVFGKEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ------------LSE 614
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT-----ASS 465
++ + P SV+ + ++KA V N L + + G++ DS GR V N I + ASS
Sbjct: 615 KVRRNPFSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIIMTSNAGASS 674
Query: 466 FVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSH 523
+E R+ +D K E++ + + + +P +NR + + + M H
Sbjct: 675 IIEPKRLGFGAGEDEKQDHERMKNSVMEEVRRIFKPEFLNRIDETIVFRALNKDDMKH 732
>gi|257792794|ref|YP_003183400.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|317489076|ref|ZP_07947601.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325831045|ref|ZP_08164369.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
gi|257476691|gb|ACV57011.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|316911808|gb|EFV33392.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325486966|gb|EGC89412.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
Length = 887
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 561 MQGEMAKLVDLEDKLHERVVGQDEAVSSVAGAIRRNRAGLSD-----PNRPIGSFLFLGP 615
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ ++ + D+ KF Q + G + G
Sbjct: 616 TGVGKTELAKALAEYLFDSEKAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 669
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + +KP SV+ L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 670 QLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 729
>gi|456013239|gb|EMF46898.1| DNA repair protein RadA [Planococcus halocryophilus Or1]
Length = 828
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 36/200 (18%)
Query: 273 NQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG 332
++LAQ+ S LN + L N ++ Q+EA++ IS+ I + R G +D
Sbjct: 19 SKLAQTESDKL--LNLESILHN----------RVIGQNEAVTSISKAIRRARAGLKD--- 63
Query: 333 ASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPP 385
P+R I F F GP GK ++A ALAE ++G +E I D+ + +PP
Sbjct: 64 --PKRPIGSFIFLGPTGVGKTELARALAESMFGDEEAMIRIDMSEYMERHSTSRLVGSPP 121
Query: 386 KFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKL 445
+ GG + ++ +KP SVV L+ ++KA V N L + ++ G+L
Sbjct: 122 GYVGYEEGGQLTE------------KVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL 169
Query: 446 PDSYGREVSVSNAIFVTASS 465
DS GR V N + + S+
Sbjct: 170 TDSKGRRVDFRNTVIIMTSN 189
>gi|300780448|ref|ZP_07090304.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium genitalium ATCC 33030]
gi|300534558|gb|EFK55617.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium genitalium ATCC 33030]
Length = 967
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 538 LHQRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 592
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 593 FLFGDEDSLIQVDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 646
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G + D GR V N + + S+
Sbjct: 647 LFDEIEKAHKEIYNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNL 692
>gi|255282672|ref|ZP_05347227.1| negative regulator of genetic competence ClpC/MecB [Bryantella
formatexigens DSM 14469]
gi|255266693|gb|EET59898.1| ATPase family associated with various cellular activities (AAA)
[Marvinbryantia formatexigens DSM 14469]
Length = 819
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 50/286 (17%)
Query: 254 ERSQELSGCCSATVN--GSISNQLAQSSSSSCPDL---NCQFDLSNW------------- 295
E +QEL+ A + + +L Q + CP++ + +S W
Sbjct: 441 EEAQELNRVQEAVLKKLAAAQKRLDQRGGARCPEVGEEDIAEIVSMWTKIPVQRLAEKET 500
Query: 296 KTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
K L + L +++ QDEA++ +++ + + R G +D P R I F F GP GK
Sbjct: 501 KRLMKLEQTLHKRVIGQDEAVTAVAKAVKRGRVGLKD-----PARPIGSFLFLGPTGVGK 555
Query: 352 RKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLA 405
+++ LAE+++G +++ I D+ + + +PP + GG
Sbjct: 556 TELSKVLAEVVFGSEQSMIRVDMSEYMEKHSVSRLVGSPPGYVGYEEGGQ---------- 605
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT--- 462
++ ++ + P SV+ L+ V+KA V N L + + G + D+ GR+V N I +
Sbjct: 606 --LSEKVRRNPYSVILLDEVEKAHPDVFNILLQVLDDGHITDAQGRKVDFKNTIIIMTSN 663
Query: 463 --ASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
A + VE ++ + + D K + E++ + + L +P +NR
Sbjct: 664 AGAQAIVEPKKLGFTAVNDEKQNYERMKGSVMEEVKRLFKPEFLNR 709
>gi|386021033|ref|YP_005939057.1| putative ATPase with chaperone activity, clpB [Pseudomonas stutzeri
DSM 4166]
gi|327481005|gb|AEA84315.1| putative ATPase with chaperone activity, clpB [Pseudomonas stutzeri
DSM 4166]
Length = 949
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE +D ++ ++++ A+ G +LA++ + LN + + L E
Sbjct: 460 KEKQGRDNSQVTEDIVAEVVASWTGIPVMKLAETETDKL--LNME----------KLLHE 507
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQDEAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 364 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 423
G ++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 563 GDEDAMIRVDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 616
Query: 424 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|291550515|emb|CBL26777.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
torques L2-14]
Length = 814
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D K L L +++ QDEA+ +++ + + R G +D P+R I F F GP
Sbjct: 499 DAQRLKNLENVLQKRVIGQDEAVGAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 553
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 403
GK +++ ALAE ++G ++ I D+ + +PP + GG
Sbjct: 554 GKTELSKALAEALFGKEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 605
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L+D V P SV+ + ++KA V N L + + G + DS GR+V SN + +
Sbjct: 606 LSDQVRTH----PYSVILFDEIEKAHPDVFNVLLQVLDDGHITDSQGRKVDFSNTVIIMT 661
Query: 464 SSFVEDARILPSEM 477
S+ A + P ++
Sbjct: 662 SNAGAKAIVEPKKL 675
>gi|379058467|ref|ZP_09848993.1| Clp-family ATP-binding protease [Serinicoccus profundi MCCC
1A05965]
Length = 841
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
+ E +EL A G +L++ SS LN + +L +I D+
Sbjct: 476 VAEVDEELIAEVLAAATGIPVFKLSEEESSRL--LNMEQELHK----------RIIGMDD 523
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
AI +SQ I + R G +D PRR F F GP GK ++A ALAE ++G +++ I
Sbjct: 524 AIKGLSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDSLI 578
Query: 371 CADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLEN 424
D+ + +PP + GG + ++ +KP SVV +
Sbjct: 579 TLDMSEYSEKHTVSRMFGSPPGYVGYEEGGQ------------LTEKVRRKPFSVVLFDE 626
Query: 425 VDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 IEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 668
>gi|296535581|ref|ZP_06897762.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296264097|gb|EFH10541.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 938
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRAL 302
E KE K+LTE ++ SA V S Q+ + + + + L
Sbjct: 563 EAKEARLKELTEAWEKERATGSAEVRASHVAQIVSKLTGIPVSELTEAEREKLLKMEERL 622
Query: 303 TEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEII 362
+++ Q+EAIS +S + R G + G+ P F F GP GK ++A ALAE++
Sbjct: 623 HQRVIGQEEAISAVSDAVRLARAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAEVV 678
Query: 363 YGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
YG + + D+ + PP + VG D G L + V +KP
Sbjct: 679 YGDENALLRIDMSEYMERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----RKP 726
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D
Sbjct: 727 YSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGAD 779
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ IS+ + + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 508 LHKRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 562
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ FI D+ + + +PP + VG D G L + V +
Sbjct: 563 TLFGDEDAFIRIDMSEYMEKHATSRLVGSPPGY----VGHDE----GGQLTEKVR----R 610
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + S+
Sbjct: 611 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAVIMTSNV 662
>gi|375089908|ref|ZP_09736230.1| hypothetical protein HMPREF9708_00620 [Facklamia languida CCUG
37842]
gi|374566194|gb|EHR37441.1| hypothetical protein HMPREF9708_00620 [Facklamia languida CCUG
37842]
Length = 825
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 289 QFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFT 344
Q +L+ K L L E++ QD A+S +++ I + R+G + SP+R I F F
Sbjct: 506 QMNLTESKRLVHLEEELHERVIGQDAAVSSVARAIRRARSGLK-----SPQRPIGSFLFL 560
Query: 345 GPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQ 398
GP GK ++A LA+ ++G +EN I D+ + + +PP + VG D
Sbjct: 561 GPTGVGKTELAKTLADSMFGSQENMIRIDMSEYMEKHSISRMIGSPPGY----VGYDE-- 614
Query: 399 FRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNA 458
A + ++ +KP SV+ L+ ++KA V N L + G+L D GR+V N
Sbjct: 615 ------AGQLTEKVRQKPYSVILLDEIEKAHPDVFNLLLQVFDDGQLTDGKGRQVDFRNT 668
Query: 459 IFVTASSF 466
I + S+
Sbjct: 669 IIIMTSNL 676
>gi|269216425|ref|ZP_06160279.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
gi|269129954|gb|EEZ61036.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
Length = 891
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +++ L L E++ QDEA+ ++ I + R G D P R I F F GP
Sbjct: 557 MQGEIAKLIDLEDRLHERVIGQDEAVHAVAGAIRRNRAGLSD-----PNRPIGSFLFLGP 611
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ ++ + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDTEKAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P +VV L+ ++KA V N L + + G+L D GREVS NAI + S+
Sbjct: 666 QLTEAVRRRPYTVVLLDEIEKAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNV 725
>gi|451979932|ref|ZP_21928334.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
gi|451762804|emb|CCQ89548.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
Length = 808
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 256 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 315
++E +++ G N++ + S+ LN +L N KI Q EA+
Sbjct: 468 TEEDIAAVVSSMTGIPLNRIEEKESTRL--LNMAEELGN----------KIVGQKEAVEA 515
Query: 316 ISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADL 374
I++ I + R+G +D RR I F F GP GK ++A ALAE ++G ++ I D+
Sbjct: 516 ITKAIRRSRSGLKDM-----RRPIGTFLFLGPTGVGKTELAGALAEFLFGQRDALIRLDM 570
Query: 375 CPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKA 428
+ N PP + GG + ++ +KP SVV + ++KA
Sbjct: 571 SEYMEKFNVSRLTGAPPGYVGYEEGGQ------------LTEKVRRKPYSVVLFDEIEKA 618
Query: 429 DVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V + L + + G+L DSYGR V N + + S+
Sbjct: 619 NPDVFHLLLQIMDDGRLTDSYGRNVDFKNTVIILTSNI 656
>gi|403718430|ref|ZP_10943315.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
gi|403208500|dbj|GAB97998.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
Length = 864
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I D+AI +SQ I + R G +D PRR F F GP GK ++A LAE
Sbjct: 514 LHKRIVGMDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKTLAE 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 569 FLFGDEDSLITLDMS-EFAEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 623 LFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 668
>gi|163841921|ref|YP_001626326.1| hemolysin [Renibacterium salmoninarum ATCC 33209]
gi|162955397|gb|ABY24912.1| negative regulator of genetic competence [Renibacterium
salmoninarum ATCC 33209]
Length = 830
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQDEAIKSLSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 33/235 (14%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ Q+EA+S +++ + + R+G +D P+R I F F GP GK ++A
Sbjct: 504 LEQVLHNRVIGQEEAVSAVAKAVRRARSGLKD-----PKRPIGSFIFLGPTGVGKTELAR 558
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G + I D+ + + +PP + GG L D +
Sbjct: 559 ALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQ--------LTDAIR- 609
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SVV + ++KA V N L + ++ G+L DS GR V NA+ + S+ A
Sbjct: 610 ---RKPYSVVLFDEIEKAHYDVFNILLQILEDGRLTDSKGRTVDFKNAVIIMTSNV--GA 664
Query: 471 RILPSEMKDCKF----SEEKIYRAKSRLTQIL---IEPALVNRSSSQKLSASETS 518
+ L + F SE AKSR+ + + P +NR + +S TS
Sbjct: 665 KHLKKDAAAVGFLAGSSENDEKAAKSRVMEEVKRTFRPEFLNRVDEMIVFSSLTS 719
>gi|339496256|ref|YP_004716549.1| ATPase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338803628|gb|AEJ07460.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFINR 806
>gi|322387004|ref|ZP_08060617.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|419844139|ref|ZP_14367439.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
gi|321142148|gb|EFX37640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|385702161|gb|EIG39311.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
Length = 810
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLETE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSQDM 723
>gi|297172541|gb|ADI23511.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0770_41L09]
Length = 827
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q +L + L ++I Q +AI +S+ I + R G +D PRR I F F+GP
Sbjct: 507 QTELDRLVHMEDELHKRIVGQQDAIEAVSRAIRRSRAGLKD-----PRRPIGSFIFSGPT 561
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++ ALAE ++ E I D+ KF + G + G +
Sbjct: 562 GVGKTELGRALAEFLFADSEALIRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGA 615
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF- 466
+ + ++P SVV L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 616 LTKAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNLG 675
Query: 467 ---VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ R L + D K S E + R + P +NR
Sbjct: 676 ARDISKGRGLGFQTGDAKSSYEIMKDKVQREIERAFNPEFLNR 718
>gi|313114809|ref|ZP_07800309.1| ATP-dependent chaperone protein ClpB [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622864|gb|EFQ06319.1| ATP-dependent chaperone protein ClpB [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 870
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA
Sbjct: 571 VLHQRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALA 625
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
+ ++ + N + D+ KF + G + G + + +KP SV
Sbjct: 626 QALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSV 679
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKD 479
V + V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 680 VLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRR 739
Query: 480 CKFSEEKIYRAKSRLTQIL---IEPALVNR 506
S E AK ++ Q+L P +NR
Sbjct: 740 ANGSNELSEEAKHQIDQLLKSKFRPEFLNR 769
>gi|227502079|ref|ZP_03932128.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Corynebacterium accolens ATCC 49725]
gi|227077234|gb|EEI15197.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium accolens ATCC 49725]
Length = 953
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 40/223 (17%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L ++ Q EA+ +S+ I + R G +D P+R I F F GP GK ++A ALA
Sbjct: 508 VLHNRVIGQSEAVDAVSKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALA 562
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E+++ +E I D+ + +PP + GG + ++
Sbjct: 563 EVMFADEEAMIRIDMSEYMERHATSRLVGSPPGYVGYEEGGQ------------LTEKVR 610
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ +
Sbjct: 611 RKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVIIMTSN------VG 664
Query: 474 PSEMKDCKF------SEEKIYR-AKSRLTQIL---IEPALVNR 506
SE+K K+ E K Y+ KS++ + L P +NR
Sbjct: 665 ASELKRNKYVGFNLGEENKDYKEMKSKVMEELKKAFRPEFLNR 707
>gi|358446330|ref|ZP_09156877.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
gi|356607742|emb|CCE55201.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
Length = 905
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 529 LHKRIIGQNEAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 583
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 584 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 637
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 638 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 683
>gi|325288483|ref|YP_004264664.1| ATPase AAA [Syntrophobotulus glycolicus DSM 8271]
gi|324963884|gb|ADY54663.1| ATPase AAA-2 domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 841
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 36/223 (16%)
Query: 250 KDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
K+L+ +QE G ++ G N+L + S+ L L E++ Q
Sbjct: 473 KNLSILNQEDIGKIVSSWTGIPVNKLEEEESARLLKLE------------EVLHERVVGQ 520
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+EA+S +++++ + R G +D P+R I F F GP GK ++A ALAE ++G + +
Sbjct: 521 EEAVSAVARSVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAEALFGDENS 575
Query: 369 FICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + + +PP + VG D G L + V +KP SV+
Sbjct: 576 LIRVDMSEYMEKHAVSRMVGSPPGY----VGHDE----GGQLTEAVR----RKPYSVLLF 623
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 624 DEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNCVLMMTSN 666
>gi|420160739|ref|ZP_14667511.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
koreensis KCTC 3621]
gi|394746031|gb|EJF34836.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
koreensis KCTC 3621]
Length = 820
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L E++ QDEAIS I+++I + R+G +D P R I F F GP GK ++A
Sbjct: 507 LEKELHERVIGQDEAISAIARSIRRARSGLKD-----PNRPIGTFMFLGPTGVGKTELAK 561
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ + + G + + G + ++ + P
Sbjct: 562 ALAATMFGSEDNMIRVDMS------EFMESYSTSRLIGSAPGYVGYDEGGQLTEKVRRNP 615
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 616 YSVVLLDEAEKAHPDIYNLMLQVFDDGYLTDSKGRKVDFRNTIIIMTSNL 665
>gi|339634753|ref|YP_004726394.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Weissella
koreensis KACC 15510]
gi|338854549|gb|AEJ23715.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Weissella
koreensis KACC 15510]
Length = 820
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L E++ QDEAIS I+++I + R+G +D P R I F F GP GK ++A
Sbjct: 507 LEKELHERVIGQDEAISAIARSIRRARSGLKD-----PNRPIGTFMFLGPTGVGKTELAK 561
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ + + G + + G + ++ + P
Sbjct: 562 ALAATMFGSEDNMIRVDMS------EFMESYSTSRLIGSAPGYVGYDEGGQLTEKVRRNP 615
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 616 YSVVLLDEAEKAHPDIYNLMLQVFDDGYLTDSKGRKVDFRNTIIIMTSNL 665
>gi|308827063|emb|CBX33349.1| putative ATPase with chaperone activity, clpB [Cronobacter
sakazakii]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|227494485|ref|ZP_03924801.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
gi|226832219|gb|EEH64602.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
Length = 880
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL +++ Q++A+ ISQ+I + R+G +D P+R F F GP GK ++A ALA
Sbjct: 513 ALHQRVVGQEDAVKAISQSIRRTRSGLKD-----PKRPGGSFIFAGPTGVGKTELAKALA 567
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ ++ I D+ + E + + + G + G + ++ ++P SV
Sbjct: 568 EFLFDDEDALITLDMS-EFSEKHTASRLF-----GAPPGYVGYDEGGQLTEKVRRRPFSV 621
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + V+KA + NSL + ++ G+L DS GR V N I + ++
Sbjct: 622 VLFDEVEKAHADIFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 668
>gi|419753033|ref|ZP_14279437.1| ATPase [Pseudomonas aeruginosa PADK2_CF510]
gi|420139539|ref|ZP_14647370.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CIG1]
gi|384400155|gb|EIE46514.1| ATPase [Pseudomonas aeruginosa PADK2_CF510]
gi|403247736|gb|EJY61361.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CIG1]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAEVMDVLRSHFRPEFINR 806
>gi|387790113|ref|YP_006255178.1| ATP-dependent chaperone ClpB [Solitalea canadensis DSM 3403]
gi|379652946|gb|AFD06002.1| ATP-dependent chaperone ClpB [Solitalea canadensis DSM 3403]
Length = 871
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 35/219 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI ++ I + R G +D + R I F F G GK ++A ALAE
Sbjct: 564 LHKRVAGQDEAIEAVADAIRRSRAGLQDKN-----RPIGSFIFLGTTGVGKTELAKALAE 618
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I++ + N + D+ + PP + VG D G L + V +
Sbjct: 619 ILFNDEHNMVRIDMSEYQERHAVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 666
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT----ASSFVEDA 470
P SV+ L+ ++KA V N L + + G+L D+ GR V NAI + S ++D+
Sbjct: 667 HPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNAIIIMTSNIGSQLIQDS 726
Query: 471 RILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
EM D EE + R K+ + +IL + P +NR
Sbjct: 727 ---FQEMDDYN-KEEVLARTKNEVFEILKKNVRPEFLNR 761
>gi|296118950|ref|ZP_06837523.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
gi|295968048|gb|EFG81300.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
Length = 905
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 529 LHKRIIGQNEAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 583
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 584 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 637
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 638 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 683
>gi|227876310|ref|ZP_03994423.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269976114|ref|ZP_06183113.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307701521|ref|ZP_07638539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
gi|227843083|gb|EEJ53279.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269935707|gb|EEZ92242.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307613313|gb|EFN92564.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
Length = 915
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 519 LHKRIIGQNEAVKAVSQSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 573
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 574 FLFGDENALIQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 627
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 628 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 673
>gi|323143510|ref|ZP_08078190.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
gi|322416704|gb|EFY07358.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
Length = 864
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI+ I+ +I + R G D P R I F F GP GK ++ A+AE
Sbjct: 567 LHQRVIGQDEAINAIANSIRRSRAGLSD-----PNRPIGSFMFMGPTGVGKTELCKAVAE 621
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ ++ + D+ KF + G + G Y+ + ++P SV+
Sbjct: 622 FLFDTEKAMVRIDMS------EFMEKFSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSVI 675
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 480
L+ ++KA V N L + + G+L D GR V N + + S+ L SEM
Sbjct: 676 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSN-------LGSEMIQE 728
Query: 481 KFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ ++ K++L QIL +P +NR
Sbjct: 729 ETGKKSYQEIKAQLLQILEKHFKPEFLNR 757
>gi|359687498|ref|ZP_09257499.1| ATP-dependent protease ClpA [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750586|ref|ZP_13306872.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
gi|418755991|ref|ZP_13312179.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|384115662|gb|EIE01919.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|404273189|gb|EJZ40509.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
Length = 846
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ QDEAI I++++ + RTG + A R F F GP GK ++A ALAE
Sbjct: 517 LKQRVVGQDEAIEKIAKSVRRARTGFK----AERRPTGSFIFLGPTGVGKTELAKALAEF 572
Query: 362 IYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G ++ + D+ P + PP + VG D G L ++V KK
Sbjct: 573 LFGDQDAMLRVDMSEYMEPHAVSRLIGAPPGY----VGYDD----GGQLTEFVR----KK 620
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P S++ L+ ++KA + N L + ++ G L D+ GR+V+ +AI + S+
Sbjct: 621 PYSIILLDEIEKAHHDIFNVLLQVMEEGNLTDTKGRKVNFRDAIIIMTSNI 671
>gi|326693114|ref|ZP_08230119.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc
argentinum KCTC 3773]
Length = 737
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 308
+T+ ++L+G AT + +N +A+S Q D+ KTL L K+
Sbjct: 370 ITDLEKQLAGADKATKVVATTNDVAESVERLTGIPVSQMGASDIERLKTLGSRLAGKVIG 429
Query: 309 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 367
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 430 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 484
Query: 368 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 427
N I D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 485 NIIRLDMS-EYSDLTAVAKLIGTTAGYVGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 539
Query: 428 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
A+ V L + + G+L D G V+ N + + S+
Sbjct: 540 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|305678729|ref|YP_003864365.1| ClpK [Klebsiella pneumoniae]
gi|223587487|gb|ACM92030.1| ClpK [Klebsiella pneumoniae]
Length = 952
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|455641970|gb|EMF21141.1| chaperone ATPase [Citrobacter freundii GTC 09479]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|421611123|ref|ZP_16052274.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
gi|408497937|gb|EKK02445.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
Length = 859
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 472 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 527
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 528 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 582
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + + D+ + N PP F GG + ++ ++P
Sbjct: 583 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 630
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 631 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 678
>gi|418472966|ref|ZP_13042612.1| Clp protease ATP binding subunit [Streptomyces coelicoflavus
ZG0656]
gi|371546359|gb|EHN74873.1| Clp protease ATP binding subunit [Streptomyces coelicoflavus
ZG0656]
Length = 842
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ V+S + + R G +SP R I F F GP GK ++A ALAE
Sbjct: 534 LHERVVGQDEAVRVVSDAVLRSRAGL-----SSPDRPIGSFLFLGPTGVGKTELARALAE 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ + D+ + E + + G + G A + + + P S++
Sbjct: 589 ALFGSEDRMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
L+ V+KA V N L + + G+L DS GR V SNA+ V S+ D
Sbjct: 643 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFSNAVVVMTSNLGSD 691
>gi|32474446|ref|NP_867440.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
Length = 859
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 472 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 527
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 528 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 582
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + + D+ + N PP F GG + ++ ++P
Sbjct: 583 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 630
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 631 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 678
>gi|407278916|ref|ZP_11107386.1| ATP-dependent chaperone ClpB [Rhodococcus sp. P14]
Length = 853
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 553 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 607
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 608 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 655
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 656 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 707
>gi|443328933|ref|ZP_21057525.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
gi|442791478|gb|ELS00973.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
Length = 893
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA++V+S I + R G +D P R I F F GP GK ++A ALA
Sbjct: 579 LHHRVIGQEEAVAVVSAAIRRARAGMKD-----PGRPIGSFLFMGPTGVGKTELARALAA 633
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E I D+ + + PP + VG + G L++ V +
Sbjct: 634 FLFDSEEAMIRIDMSEYMEKHAVSRLVGAPPGY----VGYEE----GGQLSEAVR----R 681
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ V+KA V N L + + G++ DS GR V N I V S+ + +
Sbjct: 682 RPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNVGSEHILNI 741
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
S D K+ E + R+TQ L P VNR
Sbjct: 742 SGENDTKYEE-----VEKRVTQALRKHFRPEFVNR 771
>gi|377563590|ref|ZP_09792937.1| chaperone ClpB [Gordonia sputi NBRC 100414]
gi|377529212|dbj|GAB38102.1| chaperone ClpB [Gordonia sputi NBRC 100414]
Length = 876
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|306817201|ref|ZP_07450948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
gi|304650003|gb|EFM47281.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
Length = 915
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +SQ+I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 519 LHKRIIGQNEAVKAVSQSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 573
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 574 FLFGDENALIQLDMS-EFSEKHTASRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 627
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G L DS GR V N I + ++
Sbjct: 628 LFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 673
>gi|306836895|ref|ZP_07469849.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
gi|304567200|gb|EFM42811.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
Length = 958
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ Q+EA+ IS+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETEKLLNLEEILHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFVFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 461 VTASSFVEDA 470
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|258405978|ref|YP_003198720.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
gi|257798205|gb|ACV69142.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
Length = 866
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L E++ QDEA+ ++ + + R G +D PRR I F F GP GK ++ LA
Sbjct: 573 VLHERVVGQDEAVEAVADAVLRARAGLKD-----PRRPIGSFIFLGPTGVGKTELCKTLA 627
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E ++ +EN I D+ + + PP + VG + G L + V
Sbjct: 628 ESLFDSEENMIRLDMSEYMEKHTTARLIGAPPGY----VGYEE----GGQLTEAVR---- 675
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SV+ + ++KA V N+L + + G+L DS+GR V N I + S+
Sbjct: 676 RKPYSVILFDEIEKAHADVFNTLLQILDDGRLTDSHGRTVDFKNTIIIMTSNL 728
>gi|111023664|ref|YP_706636.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
gi|110823194|gb|ABG98478.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
Length = 789
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|414085966|ref|YP_006973814.1| ATPase with chaperone activity [Klebsiella pneumoniae]
gi|410475242|gb|AFV70479.1| ATPase with chaperone activity [Klebsiella pneumoniae]
Length = 964
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 626 LHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAES 681
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 682 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 728
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 729 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 786
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 787 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 821
>gi|404373223|ref|ZP_10978494.1| hypothetical protein ESCG_01087 [Escherichia sp. 1_1_43]
gi|226840427|gb|EEH72429.1| hypothetical protein ESCG_01087 [Escherichia sp. 1_1_43]
Length = 949
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|262204257|ref|YP_003275465.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
gi|262087604|gb|ACY23572.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
Length = 876
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|451945151|ref|YP_007465787.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451904538|gb|AGF73425.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 884
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDSLIQIDM----GEYHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 668
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 40/226 (17%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEETLHNRVIGQEEAVKAISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + +PP + VG D G L + V
Sbjct: 564 ALAESMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQLTEKVR- 614
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 615 ---NKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSN----- 666
Query: 471 RILPSEMKDCKF-------SEEKIYRAKSRLTQIL---IEPALVNR 506
+ SE+K K+ +++ KS++T L P +NR
Sbjct: 667 -VGASELKQNKYVGFSMGEADQDYKDMKSKVTDALKKAFRPEFLNR 711
>gi|453072930|ref|ZP_21975943.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
gi|452756700|gb|EME15108.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
Length = 877
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|433650994|ref|YP_007295996.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
gi|433300771|gb|AGB26591.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
Length = 874
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++S + + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LHERVIGQDEAVQLVSDAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + GG + + +
Sbjct: 629 ALFDSEDNMVRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQLTEA------------VRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N+L + + G+L D+ GR+V N + + S+
Sbjct: 677 KPYSVVLLDEIEKAHADVFNTLLQVLDDGRLTDAQGRQVDFRNTVVIMTSNI 728
>gi|449134535|ref|ZP_21770031.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
gi|448886810|gb|EMB17203.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
Length = 847
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 460 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 515
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 516 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 570
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + + D+ + N PP F GG + ++ ++P
Sbjct: 571 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 618
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 619 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 666
>gi|419964527|ref|ZP_14480483.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
gi|414570109|gb|EKT80846.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
Length = 877
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|294648540|ref|ZP_06726012.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292825581|gb|EFF84312.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 468
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 130 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 185
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 186 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 232
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 233 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 290
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 291 RRLKARSAAGEEYEKTKSEVMDVLRGHFRPEFINR 325
>gi|377559991|ref|ZP_09789520.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
gi|377522859|dbj|GAB34685.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
Length = 876
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|417304237|ref|ZP_12091266.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|440716927|ref|ZP_20897429.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
gi|327539449|gb|EGF26064.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|436437995|gb|ELP31577.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
Length = 847
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE I+++ E+SQ+ G + I+ +++ + L+ + L K + L +
Sbjct: 460 KEQITQEWREKSQQTDGVVDEEI---IAEVVSKMTGIPLTRLSTEDSLRLLK-MEEELHK 515
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q +A++ +++ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 516 RVVSQSQAVTAVAKAVRRSRSGLKD-----PKRPTGSFIFAGPTGVGKTLLAKALAEYMF 570
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + + D+ + N PP F GG + ++ ++P
Sbjct: 571 GDADALVHIDMSEYMEKHNVSRLIGAPPGFVGYEEGGQ------------LTEKIRRRPY 618
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV + ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 619 AVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTILIMTTN 666
>gi|29377725|ref|NP_816879.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
faecalis V583]
gi|227517135|ref|ZP_03947184.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227555222|ref|ZP_03985269.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|257088425|ref|ZP_05582786.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257418098|ref|ZP_05595092.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|422714244|ref|ZP_16770976.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|422716305|ref|ZP_16773016.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|422721899|ref|ZP_16778478.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|424672474|ref|ZP_18109436.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|424677514|ref|ZP_18114366.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|424680868|ref|ZP_18117664.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|424682811|ref|ZP_18119573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|424688566|ref|ZP_18125171.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|424690735|ref|ZP_18127267.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|424694470|ref|ZP_18130873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|424697804|ref|ZP_18134116.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|424701101|ref|ZP_18137278.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|424704695|ref|ZP_18140790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|424711826|ref|ZP_18144038.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|424717779|ref|ZP_18147055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|424721762|ref|ZP_18150839.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|424724563|ref|ZP_18153501.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|424727723|ref|ZP_18156352.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|424744327|ref|ZP_18172621.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|424753742|ref|ZP_18181671.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
gi|29345193|gb|AAO82949.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Enterococcus
faecalis V583]
gi|227075415|gb|EEI13378.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227175651|gb|EEI56623.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|256996455|gb|EEU83757.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257159926|gb|EEU89886.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|315028021|gb|EFT39953.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|315575413|gb|EFU87604.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|315580852|gb|EFU93043.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|402352709|gb|EJU87549.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|402354333|gb|EJU89144.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|402355646|gb|EJU90411.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|402360230|gb|EJU94834.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|402363478|gb|EJU97957.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|402366381|gb|EJV00762.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|402370657|gb|EJV04854.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|402372546|gb|EJV06661.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|402374375|gb|EJV08400.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|402381195|gb|EJV14906.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|402382846|gb|EJV16484.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|402383726|gb|EJV17311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|402390441|gb|EJV23784.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|402394441|gb|EJV27613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|402395898|gb|EJV28978.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|402399294|gb|EJV32178.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|402403745|gb|EJV36401.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|405979476|ref|ZP_11037819.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391892|gb|EJZ86953.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 822
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 260 SGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQT 319
S + I+ LA S+ L Q + + + L +++ Q+EA+ +SQ+
Sbjct: 476 SDSIAEVTEEEIAEVLAMSTGIPVFKL-TQTETTKLLKMEDELHKRVIGQEEAVRALSQS 534
Query: 320 IAQRRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQ 377
I + R+G +D + G S F F GP GK ++A ALAE ++G ++ I D+ +
Sbjct: 535 IRRTRSGLKDPNRPGGS------FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMS-E 587
Query: 378 DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLS 437
E + + + G + G + ++ +KP SVV + V+KA + NSL
Sbjct: 588 FSEKHTASRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLL 642
Query: 438 KAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ G+L DS GR+V N + + ++
Sbjct: 643 QILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|295395582|ref|ZP_06805776.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971601|gb|EFG47482.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
Length = 870
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++AI +S+ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRIIGQNDAIKSVSRAIRRTRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ + E + + + G + G + ++ ++P S+V
Sbjct: 565 FLFGDESALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRRPFSIV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GREV N I + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNL 664
>gi|153813963|ref|ZP_01966631.1| hypothetical protein RUMTOR_00170 [Ruminococcus torques ATCC 27756]
gi|317501491|ref|ZP_07959689.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088037|ref|ZP_08336958.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439725|ref|ZP_08619331.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848359|gb|EDK25277.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus torques ATCC 27756]
gi|316897120|gb|EFV19193.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408993|gb|EGG88452.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336015317|gb|EGN45135.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 814
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D K L L +++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 497 DTDRLKKLESVLHQRVIGQEEAVKAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 551
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 403
GK +++ ALAE ++G +E+ I D+ + +PP + GG
Sbjct: 552 GKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 603
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L+D V P SV+ + ++KA V N L + + G + DS GR++ SN + +
Sbjct: 604 LSDQVRTH----PYSVLLFDEIEKAHPDVFNILLQVLDDGHITDSKGRKIDFSNTVIIMT 659
Query: 464 SSFVEDARILPSEM 477
S+ A I P ++
Sbjct: 660 SNAGAKAIIEPKKL 673
>gi|417936448|ref|ZP_12579762.1| Clp amino terminal domain protein [Streptococcus infantis X]
gi|343400883|gb|EGV13392.1| Clp amino terminal domain protein [Streptococcus infantis X]
Length = 810
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 241 SNEPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
+ E + P+ KDL + S L+ ++G +L Q+ + +L +
Sbjct: 463 AKEQEVPVYKDLVKESDILTTLSR--LSGIPVQKLTQTDAKKYLNLETE----------- 509
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++A+S IS+ I + ++G ++ +R I F F GP GK ++A ALA
Sbjct: 510 -LHKRVIGQEQAVSSISRAIRRNQSGIRNN-----KRPIGSFMFLGPTGVGKTELAKALA 563
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++ + I D+ KF + G + G + ++ KP SV
Sbjct: 564 EVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPS 475
+ + V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF 677
Query: 476 EMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F +E + + + P +NR + + S +S+ M
Sbjct: 678 GAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLSSQDM 723
>gi|315656011|ref|ZP_07908909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
gi|315490075|gb|EFU79702.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
Length = 884
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ L Q + S + L ++I QD+A+ +SQ+I + R G +D
Sbjct: 490 IAEVLAMSTGIPVFKL-TQAESSKLLRMEDELHKRIIGQDDAVKAVSQSIRRTRAGLKD- 547
Query: 331 HGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYH 389
P+R F F GP GK ++A ALAE ++G + + D+ + E + + +
Sbjct: 548 ----PKRPGGSFVFAGPTGVGKTELAKALAEFLFGDENALVQLDMS-EFSEKHTASRLF- 601
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
G + G + ++ +KP SVV + V+KA + NSL + ++ G L DS
Sbjct: 602 ----GSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEGHLTDSQ 657
Query: 450 GREVSVSNAIFVTASSF 466
GR V N I + ++
Sbjct: 658 GRLVDFKNTIIIMTTNL 674
>gi|423123209|ref|ZP_17110892.1| hypothetical protein HMPREF9690_05214 [Klebsiella oxytoca 10-5246]
gi|376391036|gb|EHT03717.1| hypothetical protein HMPREF9690_05214 [Klebsiella oxytoca 10-5246]
Length = 949
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|423117865|ref|ZP_17105554.1| hypothetical protein HMPREF9689_05611 [Klebsiella oxytoca 10-5245]
gi|376375104|gb|EHS87902.1| hypothetical protein HMPREF9689_05611 [Klebsiella oxytoca 10-5245]
Length = 949
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + + E+ + K+ + +L P +NR
Sbjct: 772 RRLKAREAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|325263684|ref|ZP_08130418.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
gi|324031393|gb|EGB92674.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
Length = 814
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D K L + L +++ Q+EA++ +++ + + R G +D P+R I F F GP
Sbjct: 497 DTDRLKKLEQVLHKRVVGQEEAVNAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGV 551
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKT 403
GK +++ ALAE ++G +E+ I D+ + +PP + GG
Sbjct: 552 GKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ-------- 603
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L+D V P SV+ + V+KA V N L + + G + DS GR+V N + +
Sbjct: 604 LSDQVRTH----PYSVILFDEVEKAHPDVFNILLQVLDDGHITDSQGRKVDFCNTVIIMT 659
Query: 464 SSFVEDARILPSEM 477
S+ A I P ++
Sbjct: 660 SNAGAKAIIEPKKL 673
>gi|257083072|ref|ZP_05577433.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|256991102|gb|EEU78404.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|256963095|ref|ZP_05567266.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|307272616|ref|ZP_07553867.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
gi|256953591|gb|EEU70223.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|306510718|gb|EFM79737.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|256760910|ref|ZP_05501490.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|307288063|ref|ZP_07568079.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|422704997|ref|ZP_16762805.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
gi|256682161|gb|EEU21856.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|306500941|gb|EFM70256.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|315163552|gb|EFU07569.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|229491315|ref|ZP_04385140.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
gi|229321772|gb|EEN87568.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
Length = 877
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ Q EA++ ISQ I ++R G +D + R F F GP GK ++A ALAE
Sbjct: 511 LHKRVIGQHEAVTAISQAIRRQRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEF 566
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G + I D+ + E + + + G + G + + +KP SVV
Sbjct: 567 LFGDESALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEAVRRKPFSVVL 620
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L DS GR V N I + ++
Sbjct: 621 FDEIEKAHADLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 665
>gi|255325858|ref|ZP_05366950.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
gi|255297070|gb|EET76395.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
Length = 922
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|145226771|gb|ABP48137.1| putative ATP-dependent Clp protease [Rhodococcus sp. DK17]
Length = 877
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|254255396|ref|ZP_04948712.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
gi|124901133|gb|EAY71883.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
Length = 1065
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA++ +S + + R G + A R F F GP GK ++A ALAE+
Sbjct: 736 LRERVIGQDEAVTAVSDAVRRARAGLQ----ARRRPTAVFLFLGPTGVGKTELAKALAEV 791
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G ++ + D+ + +PP + VG D G L + V ++
Sbjct: 792 VFGDEDAIVRVDMSEYMERHAVARLIGSPPGY----VGYDE----GGQLTERVR----RR 839
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
P SVV + ++KA V N L + G+L D GR V SN + + S+ D
Sbjct: 840 PYSVVLFDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLLIATSNLASD 893
>gi|290962751|ref|YP_003493933.1| chaperone [Streptomyces scabiei 87.22]
gi|260652277|emb|CBG75410.1| chaperone [Streptomyces scabiei 87.22]
Length = 879
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVQLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ M PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|255970546|ref|ZP_05421132.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256617980|ref|ZP_05474826.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256958535|ref|ZP_05562706.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|257078149|ref|ZP_05572510.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257091493|ref|ZP_05585854.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257420295|ref|ZP_05597285.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294780724|ref|ZP_06746084.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|307270010|ref|ZP_07551335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|307274514|ref|ZP_07555695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|312899758|ref|ZP_07759078.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|312905574|ref|ZP_07764688.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|312953740|ref|ZP_07772573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|384514494|ref|YP_005709587.1| ATPase/chaperone ClpC [Enterococcus faecalis OG1RF]
gi|397701405|ref|YP_006539193.1| clpC ATPase [Enterococcus faecalis D32]
gi|421513228|ref|ZP_15960008.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|422690562|ref|ZP_16748612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|422692538|ref|ZP_16750555.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|422694175|ref|ZP_16752177.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|422698655|ref|ZP_16756547.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|422700278|ref|ZP_16758127.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|422708175|ref|ZP_16765709.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|422710749|ref|ZP_16767703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|422726124|ref|ZP_16782578.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|422731699|ref|ZP_16788055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|430356044|ref|ZP_19424742.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
gi|255961564|gb|EET94040.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256597507|gb|EEU16683.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256949031|gb|EEU65663.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|256986179|gb|EEU73481.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257000305|gb|EEU86825.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257162119|gb|EEU92079.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294452164|gb|EFG20606.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|306508786|gb|EFM77875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|306513675|gb|EFM82282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|310628344|gb|EFQ11627.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|310631303|gb|EFQ14586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|311293110|gb|EFQ71666.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|315035218|gb|EFT47150.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|315148386|gb|EFT92402.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|315152751|gb|EFT96767.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|315154576|gb|EFT98592.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|315158946|gb|EFU02963.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|315162279|gb|EFU06296.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|315171228|gb|EFU15245.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|315172856|gb|EFU16873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|315576520|gb|EFU88711.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|327536383|gb|AEA95217.1| ATPase/chaperone ClpC, probable specificity factor for ClpP
protease [Enterococcus faecalis OG1RF]
gi|397338044|gb|AFO45716.1| clpC ATPase [Enterococcus faecalis D32]
gi|401673667|gb|EJS80045.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|429514421|gb|ELA03970.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|429731906|ref|ZP_19266529.1| ATPase family protein [Corynebacterium durum F0235]
gi|429144702|gb|EKX87811.1| ATPase family protein [Corynebacterium durum F0235]
Length = 871
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 531 LHKRIIGQDDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAE 585
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|397737187|ref|ZP_10503860.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
gi|396926917|gb|EJI94153.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
Length = 877
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|384517059|ref|YP_005704364.1| clpC ATPase [Enterococcus faecalis 62]
gi|323479192|gb|ADX78631.1| clpC ATPase [Enterococcus faecalis 62]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|422728728|ref|ZP_16785136.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
gi|315150882|gb|EFT94898.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ ++S+ + + R G +D PRR I F F GP GK ++A ALAE
Sbjct: 574 LHKRVVGQDEAVRLVSEAVLRARAGIKD-----PRRPIGSFLFLGPTGVGKTELAKALAE 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N I D+ + + PP + VG D G L + V +
Sbjct: 629 ALFDSEDNMIRIDMSEYMEKHSVSRLIGAPPGY----VGYDE----GGQLTEQVR----R 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ + V+KA V N+L + + G++ DS+G+ V N + + S+
Sbjct: 677 KPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGKTVDFKNCVIILTSN 727
>gi|256854930|ref|ZP_05560294.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|307290756|ref|ZP_07570654.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|422684442|ref|ZP_16742680.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
gi|256710490|gb|EEU25534.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|306498176|gb|EFM67695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|315030822|gb|EFT42754.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|424760005|ref|ZP_18187660.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
gi|402404076|gb|EJV36710.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|300861491|ref|ZP_07107575.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|422741397|ref|ZP_16795423.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|428768366|ref|YP_007154477.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
gi|295114559|emb|CBL33196.1| ATPases with chaperone activity, ATP-binding subunit [Enterococcus
sp. 7L76]
gi|300848952|gb|EFK76705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|315143909|gb|EFT87925.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|427186539|emb|CCO73763.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|311740167|ref|ZP_07713999.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311304722|gb|EFQ80793.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 918
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 534 LHKRIIGQDEAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 589 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 643 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 688
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI +S++I + R G +D PRR F F GP GK ++A ALAE
Sbjct: 517 LHKRVIGQNEAIKALSRSIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKALAE 571
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + PP + GG + ++ +
Sbjct: 572 FLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQ------------LTEKVRR 619
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 620 KPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 671
>gi|255974129|ref|ZP_05424715.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|307283899|ref|ZP_07564072.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|422736196|ref|ZP_16792461.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
gi|255967001|gb|EET97623.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|306503549|gb|EFM72796.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|315167028|gb|EFU11045.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|432334057|ref|ZP_19585778.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430779024|gb|ELB94226.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 869
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 568 LHERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 622
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 623 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 670
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 671 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 722
>gi|345853700|ref|ZP_08806581.1| Clp protease ATP binding subunit [Streptomyces zinciresistens K42]
gi|345634824|gb|EGX56450.1| Clp protease ATP binding subunit [Streptomyces zinciresistens K42]
Length = 850
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ V++ + + R G ASP R I F F GP GK ++A ALAE
Sbjct: 541 LHERVVGQDEAVRVVADAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELARALAE 595
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E + D+ + E + + G + G A + + + P S++
Sbjct: 596 ALFGSEERMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 649
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
L+ ++KA V N L + + G+L D+ GR V SNA+ V S+ +A
Sbjct: 650 LLDEIEKAHPDVFNILLQVLDDGRLTDAQGRTVDFSNAVVVMTSNLGSEA 699
>gi|336427981|ref|ZP_08607971.1| hypothetical protein HMPREF0994_03977 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336008460|gb|EGN38477.1| hypothetical protein HMPREF0994_03977 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 813
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 29/246 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+S +++ + + R G +D PRR I F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQEEAVSAVARAMRRGRVGLQD-----PRRPIGSFLFLGPTGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ +G + +PP + VG D G L++ V +
Sbjct: 565 AMFGSENALIRIDMSEYMEGHSVSKLIGSPPGY----VGFDD----GGQLSEKVR----R 612
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
P SVV + V+KA V N L + + G + DS GR+VS N + + S+ I P
Sbjct: 613 NPYSVVLFDEVEKAHPDVFNILLQVLDDGHITDSKGRKVSFKNTVLIMTSNAGAQRIIDP 672
Query: 475 SEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNK 529
+ D K EK+ + L +P +NR + T E M L
Sbjct: 673 KNLGFSAHTDEKKDYEKMKAGVMEEVKRLFKPEFINRIDEIMVFHPLTKENMKQIITLLS 732
Query: 530 RKLIGR 535
R L R
Sbjct: 733 RDLTDR 738
>gi|389844868|ref|YP_006346948.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387859614|gb|AFK07705.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 794
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW--FNFTG 345
Q + + L + EK Q+EA+ ++SQTI + R G H P W F F G
Sbjct: 489 LQSEREKLRDLESIIHEKFVDQEEAVKIVSQTIRRARAGLNAAH--KP----WGSFLFMG 542
Query: 346 PDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQF 399
P GK ++A LA I++G +E + D+ + + PP + GG +
Sbjct: 543 PTGVGKTELAKRLAFILFGSEEAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTE- 601
Query: 400 RGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAI 459
+ ++P SVV L+ ++KA V + L + + G+L D G+ VS SN I
Sbjct: 602 -----------AVRRRPYSVVLLDEIEKAHREVHSVLLQIMDDGRLTDGKGKTVSFSNTI 650
Query: 460 FVTASSFVEDARILPSEM-KDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETS 518
+ S+ + SE+ + +EE + +A P +NR S L S
Sbjct: 651 IIMTSNIASEELASTSELSRAMDLAEESLRKA--------FRPEFINRLDSIVLFRPLDS 702
Query: 519 EGM 521
E M
Sbjct: 703 EAM 705
>gi|256960597|ref|ZP_05564768.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|293384400|ref|ZP_06630281.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|293389786|ref|ZP_06634227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|312906551|ref|ZP_07765552.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|312910758|ref|ZP_07769596.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
gi|256951093|gb|EEU67725.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|291078248|gb|EFE15612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|291080912|gb|EFE17875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|310627420|gb|EFQ10703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|311288957|gb|EFQ67513.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|69247808|ref|ZP_00604499.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal
[Enterococcus faecium DO]
gi|257880379|ref|ZP_05660032.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,230,933]
gi|257882375|ref|ZP_05662028.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,502]
gi|257886165|ref|ZP_05665818.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,501]
gi|257891707|ref|ZP_05671360.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,410]
gi|257894046|ref|ZP_05673699.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,408]
gi|260559344|ref|ZP_05831525.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium C68]
gi|293559798|ref|ZP_06676317.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1162]
gi|293568579|ref|ZP_06679897.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1071]
gi|294622845|ref|ZP_06701791.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium U0317]
gi|314939248|ref|ZP_07846500.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a04]
gi|314942545|ref|ZP_07849382.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133C]
gi|314953692|ref|ZP_07856573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133A]
gi|314992426|ref|ZP_07857851.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133B]
gi|314998259|ref|ZP_07863131.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a01]
gi|383330163|ref|YP_005356047.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium Aus0004]
gi|389869868|ref|YP_006377291.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium DO]
gi|406581106|ref|ZP_11056282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD4E]
gi|406583376|ref|ZP_11058453.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD3E]
gi|406585708|ref|ZP_11060684.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD2E]
gi|406591079|ref|ZP_11065389.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD1E]
gi|415898304|ref|ZP_11551253.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4453]
gi|416141432|ref|ZP_11599392.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4452]
gi|424791936|ref|ZP_18218227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium V689]
gi|424812991|ref|ZP_18238226.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium S447]
gi|424824694|ref|ZP_18249684.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R501]
gi|424854778|ref|ZP_18279131.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R499]
gi|424901262|ref|ZP_18324789.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R497]
gi|424951349|ref|ZP_18366460.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R496]
gi|424955143|ref|ZP_18370000.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R494]
gi|424957912|ref|ZP_18372608.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R446]
gi|424959403|ref|ZP_18373989.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1986]
gi|424962682|ref|ZP_18376999.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1190]
gi|424966466|ref|ZP_18380263.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1140]
gi|424971827|ref|ZP_18385234.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1139]
gi|424974907|ref|ZP_18388113.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1137]
gi|424977848|ref|ZP_18390823.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1123]
gi|424980389|ref|ZP_18393185.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV99]
gi|424984427|ref|ZP_18396961.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV69]
gi|424986456|ref|ZP_18398876.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV38]
gi|424991644|ref|ZP_18403782.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV26]
gi|424995738|ref|ZP_18407598.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV168]
gi|424997761|ref|ZP_18409500.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV165]
gi|425000862|ref|ZP_18412406.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV161]
gi|425003407|ref|ZP_18414777.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV102]
gi|425007446|ref|ZP_18418576.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV1]
gi|425011680|ref|ZP_18422561.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E422]
gi|425014419|ref|ZP_18425095.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E417]
gi|425016510|ref|ZP_18427071.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C621]
gi|425020613|ref|ZP_18430912.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C497]
gi|425030265|ref|ZP_18435456.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C1904]
gi|425032233|ref|ZP_18437303.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 515]
gi|425034205|ref|ZP_18439111.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 514]
gi|425040444|ref|ZP_18444914.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 513]
gi|425042601|ref|ZP_18446919.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 511]
gi|425045994|ref|ZP_18450048.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 510]
gi|425047301|ref|ZP_18451266.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 509]
gi|425052075|ref|ZP_18455707.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 506]
gi|425056615|ref|ZP_18460065.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 505]
gi|425057382|ref|ZP_18460802.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 504]
gi|425061606|ref|ZP_18464822.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 503]
gi|430824196|ref|ZP_19442762.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0120]
gi|430832437|ref|ZP_19450482.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0333]
gi|430834943|ref|ZP_19452944.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0679]
gi|430837293|ref|ZP_19455266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0680]
gi|430840077|ref|ZP_19458011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0688]
gi|430845235|ref|ZP_19463130.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1050]
gi|430847994|ref|ZP_19465826.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1133]
gi|430853898|ref|ZP_19471623.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1258]
gi|430856480|ref|ZP_19474169.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1392]
gi|430859078|ref|ZP_19476695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1552]
gi|430867550|ref|ZP_19482502.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1574]
gi|431310560|ref|ZP_19508729.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1626]
gi|431385858|ref|ZP_19511499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1627]
gi|431447323|ref|ZP_19513835.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1630]
gi|431509374|ref|ZP_19515791.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1634]
gi|431564033|ref|ZP_19519777.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1731]
gi|431744703|ref|ZP_19533570.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2071]
gi|431749761|ref|ZP_19538495.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2297]
gi|431756043|ref|ZP_19544684.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2883]
gi|431760983|ref|ZP_19549573.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3346]
gi|431768408|ref|ZP_19556846.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1321]
gi|431771921|ref|ZP_19560293.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1644]
gi|431774755|ref|ZP_19563059.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2369]
gi|431776327|ref|ZP_19564591.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2560]
gi|431780287|ref|ZP_19568470.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4389]
gi|431783284|ref|ZP_19571404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6012]
gi|431784239|ref|ZP_19572282.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6045]
gi|447913938|ref|YP_007395350.1| ATP-dependent Clp protease [Enterococcus faecium NRRL B-2354]
gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal
[Enterococcus faecium DO]
gi|257814607|gb|EEV43365.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,230,933]
gi|257818033|gb|EEV45361.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,502]
gi|257822021|gb|EEV49151.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,501]
gi|257828067|gb|EEV54693.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,410]
gi|257830425|gb|EEV57032.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,408]
gi|260074443|gb|EEW62764.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium C68]
gi|291588721|gb|EFF20551.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1071]
gi|291597704|gb|EFF28850.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium U0317]
gi|291606243|gb|EFF35658.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1162]
gi|313587768|gb|EFR66613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a01]
gi|313593034|gb|EFR71879.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133B]
gi|313594316|gb|EFR73161.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133A]
gi|313598694|gb|EFR77539.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133C]
gi|313641454|gb|EFS06034.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a04]
gi|364090118|gb|EHM32745.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4453]
gi|364090179|gb|EHM32800.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4452]
gi|378939857|gb|AFC64929.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium Aus0004]
gi|388535117|gb|AFK60309.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium DO]
gi|402916532|gb|EJX37395.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium S447]
gi|402918364|gb|EJX39066.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium V689]
gi|402925483|gb|EJX45619.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R501]
gi|402930487|gb|EJX50137.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R496]
gi|402930877|gb|EJX50491.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R497]
gi|402932346|gb|EJX51863.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R499]
gi|402934828|gb|EJX54130.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R494]
gi|402942272|gb|EJX60882.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R446]
gi|402950574|gb|EJX68565.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1986]
gi|402951458|gb|EJX69385.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1190]
gi|402955245|gb|EJX72790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1137]
gi|402956398|gb|EJX73862.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1140]
gi|402957349|gb|EJX74742.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1139]
gi|402964228|gb|EJX81031.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1123]
gi|402966590|gb|EJX83211.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV99]
gi|402968933|gb|EJX85383.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV69]
gi|402976265|gb|EJX92168.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV26]
gi|402976426|gb|EJX92321.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV168]
gi|402976494|gb|EJX92385.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV38]
gi|402985370|gb|EJY00582.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV165]
gi|402988242|gb|EJY03259.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV161]
gi|402992086|gb|EJY06817.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV102]
gi|402994992|gb|EJY09481.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV1]
gi|402995962|gb|EJY10377.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E422]
gi|402998773|gb|EJY13015.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E417]
gi|403003718|gb|EJY17586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C1904]
gi|403006923|gb|EJY20532.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C621]
gi|403008908|gb|EJY22389.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C497]
gi|403012836|gb|EJY26008.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 513]
gi|403013627|gb|EJY26707.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 515]
gi|403020968|gb|EJY33454.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 514]
gi|403022956|gb|EJY35272.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 511]
gi|403025755|gb|EJY37803.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 510]
gi|403031466|gb|EJY43069.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 505]
gi|403034442|gb|EJY45892.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 509]
gi|403035890|gb|EJY47269.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 506]
gi|403040585|gb|EJY51651.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 504]
gi|403040938|gb|EJY51984.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 503]
gi|404453066|gb|EKA00174.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD4E]
gi|404456791|gb|EKA03416.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD3E]
gi|404462243|gb|EKA08030.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD2E]
gi|404468315|gb|EKA13311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD1E]
gi|430441368|gb|ELA51479.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0120]
gi|430479922|gb|ELA57125.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0333]
gi|430484767|gb|ELA61725.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0679]
gi|430487530|gb|ELA64262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0680]
gi|430490068|gb|ELA66619.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0688]
gi|430495785|gb|ELA71917.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1050]
gi|430536070|gb|ELA76451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1133]
gi|430539963|gb|ELA80193.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1258]
gi|430544388|gb|ELA84424.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1552]
gi|430544440|gb|ELA84470.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1392]
gi|430550137|gb|ELA89943.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1574]
gi|430579192|gb|ELB17722.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1626]
gi|430580836|gb|ELB19298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1627]
gi|430585539|gb|ELB23819.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1630]
gi|430586793|gb|ELB25040.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1634]
gi|430589700|gb|ELB27822.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1731]
gi|430605012|gb|ELB42430.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2071]
gi|430611105|gb|ELB48221.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2297]
gi|430615898|gb|ELB52832.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2883]
gi|430623001|gb|ELB59709.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3346]
gi|430629236|gb|ELB65646.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1321]
gi|430632559|gb|ELB68778.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1644]
gi|430633491|gb|ELB69653.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2369]
gi|430640340|gb|ELB76184.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4389]
gi|430641177|gb|ELB76992.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2560]
gi|430645560|gb|ELB81069.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6012]
gi|430649954|gb|ELB85318.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6045]
gi|445189647|gb|AGE31289.1| ATP-dependent Clp protease [Enterococcus faecium NRRL B-2354]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + + + L ++ Q+EA+ IS+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETAKLLNMEEILHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFVFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 461 VTASSFVEDA 470
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|431241284|ref|ZP_19503787.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1622]
gi|430571679|gb|ELB10557.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1622]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|293572753|ref|ZP_06683707.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E980]
gi|431739148|ref|ZP_19528087.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1972]
gi|291607103|gb|EFF36471.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E980]
gi|430596281|gb|ELB34120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1972]
Length = 828
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|422719707|ref|ZP_16776335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
gi|315032999|gb|EFT44931.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|428779009|ref|YP_007170795.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428693288|gb|AFZ49438.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 793
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E+I Q EA+S +S+ I + R G +D R F F+GP GK ++ ALA+
Sbjct: 479 LHERIIGQSEAVSAVSRAIRRARVGMKDRD----RPIASFIFSGPTGVGKTELTKALAQY 534
Query: 362 IYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G +E I D+ PQ + +PP F GG + ++ ++
Sbjct: 535 LFGDEEAMIRLDMSEYMDPQSVSKLIGSPPGFVGYEEGGQ------------LTEQIRRR 582
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P +VV + ++KA V NS+ + + G L D+ GR+V N + + S+
Sbjct: 583 PYTVVLFDEIEKAHPDVFNSMLQILDEGHLTDAKGRQVDFKNTLLIMTSNI 633
>gi|225377785|ref|ZP_03755006.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
gi|225210369|gb|EEG92723.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
Length = 818
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
+ K L L +++ Q+EA++ +++ + + R G +D PRR I F F GP GK
Sbjct: 505 ARLKKLEATLHKRVVGQEEAVTAVAKAVRRGRVGLKD-----PRRPIGSFLFLGPTGVGK 559
Query: 352 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
+I+ ALAE ++G ++ I D+ + +PP + GG
Sbjct: 560 TEISKALAEAVFGNEQAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEDGGQ---------- 609
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT--- 462
++ ++ + P SV+ + ++KA V N L + + G + DS GR V N I +
Sbjct: 610 --LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRRVDFKNTIIIMTSN 667
Query: 463 --ASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
A S VE ++ + D K + E++ + + + +P +NR
Sbjct: 668 AGAQSIVEPKKLGFASSDDEKQNYERMKNSVMEEVRRIFKPEFLNR 713
>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 861
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L+ +I Q EA++ +S +I + R G D S F F GP GK ++A ALA+
Sbjct: 569 LSSRIIGQSEAVNAVSDSILRARAGLSDQSRPSG----SFLFLGPTGVGKTELAKALADF 624
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +++ I D+ + + PP + GG Y+ + +K
Sbjct: 625 MFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 672
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA + V N L + + G+L DS+GR V N I + S+
Sbjct: 673 PYSVVLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNL 723
>gi|78358452|ref|YP_389901.1| ATPase AAA [Desulfovibrio alaskensis G20]
gi|78220857|gb|ABB40206.1| ATPase AAA-2 domain protein [Desulfovibrio alaskensis G20]
Length = 949
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ ++ R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADSVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K E+ + KS + +L P +NR
Sbjct: 772 RRLKARGAGGEEYVKTKSEVMDVLRGHFRPEFLNR 806
>gi|257080312|ref|ZP_05574673.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|256988342|gb|EEU75644.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|339640013|ref|ZP_08661457.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453282|gb|EGP65897.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 812
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 16/224 (7%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L + L +++ QDEAIS IS+ I + ++G H +R I F F GP
Sbjct: 495 TQTDAKKYLHLEKELHQRVIGQDEAISAISRAIRRNQSGIRSH-----KRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAETLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNILLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ D + + +D + +E + + + P +NR
Sbjct: 664 GATSLRDDKTVGFGARDIRLDQENMEKRMLEELKKTYRPEFINR 707
>gi|314949476|ref|ZP_07852812.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0082]
gi|313644145|gb|EFS08725.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0082]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|229547309|ref|ZP_04436034.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
gi|229307548|gb|EEN73535.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|229547888|ref|ZP_04436613.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
gi|229306909|gb|EEN72905.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
Length = 831
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 504 LHERVIGQDEAVQAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 558
Query: 361 IIYGGKENFICADLC------PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + +PP + GG + ++ +
Sbjct: 559 SMFGDEDALIRIDMSEFMERHTTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 606
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N L + + G+L D GR V N + + S+
Sbjct: 607 KPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV 658
>gi|392988260|ref|YP_006486853.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
hirae ATCC 9790]
gi|392335680|gb|AFM69962.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
hirae ATCC 9790]
Length = 826
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 520 RVVGQDEAVKAVSRAIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAKALSEVMF 574
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + + I D+ + +PP + VG D G L + + +KP
Sbjct: 575 GDENSLIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 622
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 623 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 671
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|354615766|ref|ZP_09033497.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
gi|353219879|gb|EHB84386.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
Length = 847
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 32/239 (13%)
Query: 248 ISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNC------------------- 288
+S++ ER+ L + T+ G I + S PD++
Sbjct: 465 VSEEHYERASALRDEIN-TLRGRIEEEKQGERPSEAPDVSAVDIAEVVSRISGVPVAQLT 523
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q + TL L ++ QDEA+ +S+++ + R G A P R F F GP
Sbjct: 524 QEERERLLTLEEHLHGRVVGQDEAVRAVSESVRRTRAGL-----AEPNRPSGSFLFLGPT 578
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++A ALAE ++G ++ I D+ + GE + + G + G A
Sbjct: 579 GVGKTELARALAEALFGTDDHMIRLDMS-EYGERHTVSRLV-----GAPPGYVGYEEAGQ 632
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P SV+ L+ ++KA V N L + ++ G+L D GR V+ +N + + S+
Sbjct: 633 LTEVVRRRPYSVILLDEIEKAHADVFNLLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 691
>gi|225570736|ref|ZP_03779759.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
gi|225160198|gb|EEG72817.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
Length = 812
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ +S+ I + R G +D P+R I F F GP GK +++
Sbjct: 503 LEQTLHKRVIGQEEAVRAVSKAIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 557
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
AL+E ++G +E+ I D+ + + +PP + VG D G L++ V
Sbjct: 558 ALSEALFGNEESMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 608
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+ P SVV + ++KA V N L + + G + DS GR+V N + + S+ A
Sbjct: 609 ---RHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAGAQA 665
Query: 471 RILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
I P ++ +D +++ R +++ P VNR
Sbjct: 666 IIDPKKLGFNAREDAAGDYKRMKDNVMREIKLIFRPEFVNR 706
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A ALA
Sbjct: 512 VLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELARALA 566
Query: 360 EIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E ++G ++ I D+ + N +PP + GG + ++
Sbjct: 567 EALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTEKVR 614
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHQRVIGQDEAVKAVSRAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + + PP + VG D G L + V +
Sbjct: 562 ALFGDEDAMVRIDMSEYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L D+ GR V N + + S+
Sbjct: 610 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 660
>gi|134097027|ref|YP_001102688.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133909650|emb|CAL99762.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 853
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQDDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 565 FLFGDDDALVQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 619 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 664
>gi|431083304|ref|ZP_19495875.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1604]
gi|430565125|gb|ELB04294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1604]
Length = 828
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|427397794|ref|ZP_18890276.1| hypothetical protein HMPREF9307_02452 [Enterococcus durans
FB129-CNAB-4]
gi|430861155|ref|ZP_19478745.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1573]
gi|430965333|ref|ZP_19487735.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1576]
gi|431012569|ref|ZP_19490224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1578]
gi|431266418|ref|ZP_19506176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1623]
gi|425722105|gb|EKU85005.1| hypothetical protein HMPREF9307_02452 [Enterococcus durans
FB129-CNAB-4]
gi|430550523|gb|ELA90317.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1573]
gi|430555179|gb|ELA94731.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1576]
gi|430559666|gb|ELA99006.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1578]
gi|430576158|gb|ELB14836.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1623]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|375099628|ref|ZP_09745891.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374660360|gb|EHR60238.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 843
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA++ +++++ + R G A P R F F GP GK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVAAVAESVRRARAGL-----AEPGRPSGSFLFLGPTGVGKTELARALAE 590
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E+ I D+ + GE + + G + G A + + ++P SVV
Sbjct: 591 ALFGSEESMIRLDMS-EYGERHTVSRLV-----GAPPGYVGYEEAGQLTEAVRRRPYSVV 644
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + ++ G+L D GR V+ +N + + S+
Sbjct: 645 LLDEIEKAHQDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 690
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L +++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A
Sbjct: 504 LEEVLHDRVIGQEEAVKAISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 558
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++ ++ I D+ + + +PP + GG +
Sbjct: 559 ALAEAMFADEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTE 606
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
++ +KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 607 KVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSN----- 661
Query: 471 RILPSEMKDCKF 482
+ SE+K K+
Sbjct: 662 -VGASELKRNKY 672
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|293553560|ref|ZP_06674185.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1039]
gi|291602282|gb|EFF32509.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1039]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 495 AQTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 550 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 604
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 605 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 657
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 658 IMTSNVGADA 667
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 26/173 (15%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL +++ Q+EA+ +S I + R+G +D P+R I F F GP GK ++A ALA
Sbjct: 513 ALHQRVVGQEEAVQSVSNAIRRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARALA 567
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFY-HQVVGGDSVQFRGKTLADYVAWEL 412
++++G ++ I D+ + + +PP + H+ G + + R
Sbjct: 568 DVLFGDEDAMIRLDMSEYMEKHTVSRLLGSPPGYVGHEESGQLTEKVR------------ 615
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++P SV+ L+ ++KA V N+L + ++ G+L D+ GR V N + + S+
Sbjct: 616 -RRPYSVILLDEIEKAHPEVFNTLLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 667
>gi|416386179|ref|ZP_11684917.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
gi|357264720|gb|EHJ13568.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
Length = 789
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +KI QD A+ +S+ I + R G ++ P+R I F F GP GK ++ ALAE
Sbjct: 474 LHKKIIGQDAAVEAVSRAIRRARIGLQN-----PKRPIASFIFAGPTGVGKTELTKALAE 528
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G K+ I D+ E P + G + F G + + +KP SVV
Sbjct: 529 FLFGSKDAMIRLDMS----EYMEPQTVSKLI--GTAPGFVGYEEGGQLTEAVRRKPYSVV 582
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 583 LFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLVIMTSNL 628
>gi|332637144|ref|ZP_08416007.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Weissella
cibaria KACC 11862]
Length = 832
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+S I+++I + R+G +D P+R I F F GP GK ++A
Sbjct: 517 LEKVLHNRVVGQDEAVSAIARSIRRARSGLKD-----PQRPIGTFMFLGPTGTGKTELAK 571
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ + + G + + G + ++ + P
Sbjct: 572 ALAEAMFGSEDNMIRVDMS------EYREAYSASRLVGSAPGYVGYEEGGQLTEKVRRNP 625
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA + N + + G L D+ GR+V N I + S+
Sbjct: 626 YSVVLLDEAEKAHPDIYNLMLQVFDDGYLTDAKGRKVDFRNTIIIMTSNL 675
>gi|261209122|ref|ZP_05923525.1| uvrB/uvrC protein/AAA ATPase [Enterococcus faecium TC 6]
gi|289567358|ref|ZP_06447730.1| chaperone protein clpB [Enterococcus faecium D344SRF]
gi|294616220|ref|ZP_06696015.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1636]
gi|294619581|ref|ZP_06699011.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1679]
gi|430821377|ref|ZP_19439987.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0045]
gi|430827056|ref|ZP_19445223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0164]
gi|430829873|ref|ZP_19447944.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0269]
gi|430851185|ref|ZP_19468937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1185]
gi|430904851|ref|ZP_19484892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1575]
gi|431214027|ref|ZP_19501084.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1620]
gi|431666134|ref|ZP_19523987.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1904]
gi|431747317|ref|ZP_19536114.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2134]
gi|431766209|ref|ZP_19554705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4215]
gi|260076949|gb|EEW64673.1| uvrB/uvrC protein/AAA ATPase [Enterococcus faecium TC 6]
gi|289160849|gb|EFD08777.1| chaperone protein clpB [Enterococcus faecium D344SRF]
gi|291590918|gb|EFF22632.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1636]
gi|291594179|gb|EFF25623.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1679]
gi|430438524|gb|ELA48947.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0045]
gi|430444409|gb|ELA54256.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0164]
gi|430479362|gb|ELA56611.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0269]
gi|430534401|gb|ELA74855.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1185]
gi|430554630|gb|ELA94222.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1575]
gi|430570345|gb|ELB09310.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1620]
gi|430600061|gb|ELB37730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1904]
gi|430606585|gb|ELB43934.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2134]
gi|430627279|gb|ELB63796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4215]
Length = 830
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 577
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 578 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 625
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 492 AQTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I
Sbjct: 602 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTII 654
Query: 461 VTASSFVEDA 470
+ S+ DA
Sbjct: 655 IMTSNVGADA 664
>gi|431116708|ref|ZP_19497974.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1613]
gi|430568488|gb|ELB07535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1613]
Length = 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|430842573|ref|ZP_19460485.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1007]
gi|430492797|gb|ELA69138.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1007]
Length = 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 310
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 311 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 369
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 370 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 310
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 311 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 369
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 370 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 310
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 311 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 369
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 370 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 509 LEEVLHRRVVGQDEAVKAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELAR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67856440|gb|EAM51682.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 789
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +KI QD A+ +S+ I + R G ++ P+R I F F GP GK ++ ALAE
Sbjct: 474 LHKKIIGQDAAVEAVSRAIRRARIGLQN-----PKRPIASFIFAGPTGVGKTELTKALAE 528
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G K+ I D+ E P + G + F G + + +KP SVV
Sbjct: 529 FLFGSKDAMIRLDMS----EYMEPQTVSKLI--GTAPGFVGYEEGGQLTEAVRRKPYSVV 582
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 583 LFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLVIMTSNL 628
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 310
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 311 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 369
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 370 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|257899815|ref|ZP_05679468.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com15]
gi|257837727|gb|EEV62801.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com15]
Length = 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|418061731|ref|ZP_12699572.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
gi|373564717|gb|EHP90805.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
Length = 964
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 617 LHERVIGQEEAIRAVADAVRLARAGLREGSGPTA----TFLFLGPTGVGKTELAKTLAEV 672
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 673 IFGDQDAMIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 719
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 720 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 777
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ E + KS L ++L P +NR
Sbjct: 778 RNLTKRGSREFDEAKQKSELMEVLRGHFRPEFINR 812
>gi|227552834|ref|ZP_03982883.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium TX1330]
gi|257888815|ref|ZP_05668468.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,141,733]
gi|257897252|ref|ZP_05676905.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com12]
gi|293379009|ref|ZP_06625164.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium PC4.1]
gi|424763472|ref|ZP_18190947.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX1337RF]
gi|431041344|ref|ZP_19492838.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1590]
gi|431753215|ref|ZP_19541891.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2620]
gi|431758549|ref|ZP_19547175.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3083]
gi|431763306|ref|ZP_19551858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3548]
gi|227178077|gb|EEI59049.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium TX1330]
gi|257824869|gb|EEV51801.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,141,733]
gi|257833817|gb|EEV60238.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com12]
gi|292642550|gb|EFF60705.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium PC4.1]
gi|402422851|gb|EJV55077.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX1337RF]
gi|430561650|gb|ELB00909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1590]
gi|430612400|gb|ELB49441.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2620]
gi|430617109|gb|ELB53991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3083]
gi|430622400|gb|ELB59128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3548]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|431601052|ref|ZP_19522537.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1861]
gi|431742386|ref|ZP_19531280.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2039]
gi|430590209|gb|ELB28294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1861]
gi|430600388|gb|ELB38041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2039]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A AL+E+++
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKD-----PDRPIGSFMFLGPTGVGKTELAKALSEVMF 575
Query: 364 GGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP + VG D G L + + +KP
Sbjct: 576 GSEDALIRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR----QKPY 623
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 SVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|300916538|ref|ZP_07133268.1| ATPase family protein [Escherichia coli MS 115-1]
gi|300416162|gb|EFJ99472.1| ATPase family protein [Escherichia coli MS 115-1]
Length = 964
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 567 EAKETELKQLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 624
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 625 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GDKPV--ATFLFLGPTGVGKTELAKALAE 680
Query: 361 IIYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 681 SIYGDEGALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR---- 727
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 728 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 785
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 786 QRRLKAGGAAGEEYEKTKSEVMDVLRGHFRPEFINR 821
>gi|149921121|ref|ZP_01909579.1| ATP-dependent chaperone protein ClpB [Plesiocystis pacifica SIR-1]
gi|149818008|gb|EDM77467.1| ATP-dependent chaperone protein ClpB [Plesiocystis pacifica SIR-1]
Length = 906
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + + T+ L E++ Q EAI +S + Q R G D P R + F F GP
Sbjct: 588 LQGEQAKLLTMEAKLHERVIGQAEAIEAVSAAVRQARAGLAD-----PERPMGSFLFLGP 642
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++ + + + D+ + + PP + VG D
Sbjct: 643 TGVGKTELAKALAEFLFDDERSVVRIDMSEYMEKFSVSRLIGAPPGY----VGYDE---- 694
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
G L + V +KP SVV L+ V+KA V N L + + G+L DS GR V N +
Sbjct: 695 GGQLTEAVR----RKPYSVVLLDEVEKAHPEVFNLLLQVLDDGRLTDSQGRTVDFRNTLI 750
Query: 461 VTASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ S+ L + + SE R + L + P +NR
Sbjct: 751 IMTSNIGSQ---LAGAVATGELSEPDFLRQREALLRQHFRPEFINR 793
>gi|417918051|ref|ZP_12561604.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
gi|342829042|gb|EGU63403.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDM 722
>gi|312866922|ref|ZP_07727135.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
gi|311097705|gb|EFQ55936.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDM 722
>gi|302390927|ref|YP_003826747.1| ATPase AAA [Acetohalobium arabaticum DSM 5501]
gi|302203004|gb|ADL11682.1| ATPase AAA-2 domain protein [Acetohalobium arabaticum DSM 5501]
Length = 813
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 306 IDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYG 364
I QDEAI +SQ + + R G +D P+R I F F GP GK ++A LAE ++
Sbjct: 514 IVGQDEAIEAVSQAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKTLAEAMFD 568
Query: 365 GKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
+E I D+ + + PP + GG + ++ ++P S
Sbjct: 569 DEEAMIRIDMSEYMEKHAVSRLVGAPPGYVGHEEGGQ------------LTEQVRRQPFS 616
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS----SFVED---AR 471
V+ L+ ++KA V N L + ++ G+L DS GR V N I + S + +E+
Sbjct: 617 VILLDEIEKAHPEVFNMLLQVLEDGQLTDSQGRTVDFKNTIIIMTSNVGANLIENQSGVG 676
Query: 472 ILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
PSE K +E R K ++T L P +NR
Sbjct: 677 FTPSE----KNAETSYQRMKEKVTSELKKQFRPEFLNR 710
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQD 310
D +E ++E+ A+ G +LA++ ++ LN + + L E++ QD
Sbjct: 466 DHSEVTEEIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHERVIGQD 513
Query: 311 EAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENF 369
A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++G +++
Sbjct: 514 AAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSM 568
Query: 370 ICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
I D+ KF + G + G + ++ +KP SVV L+ ++KA
Sbjct: 569 IRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAH 622
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V N L + + G+L DS GR V N + + S+
Sbjct: 623 PDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|4103472|gb|AAD01783.1| ClpC [Lactococcus lactis subsp. cremoris MG1363]
Length = 816
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 254 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 369 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHLDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|365851807|ref|ZP_09392222.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
gi|363715748|gb|EHL99171.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
parafarraginis F0439]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S++I + R+G +D P R I F GP GK ++A
Sbjct: 514 LEKVLHQRVVGQEEAISAVSRSIRRARSGLKD-----PNRPIGSFMLLGPTGVGKTELAK 568
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
A+AE ++G +++ I D+ K+ + G + + G + ++ +KP
Sbjct: 569 AVAEAVFGSEDDMIRVDMS------EYMEKYSTSRLIGSAPGYVGYDEGGQLTEKVRQKP 622
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + V+KA V N L + + G L DS GR++ N + + S+
Sbjct: 623 YSVVLFDEVEKAHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 672
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ D
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGAD 664
>gi|357420426|ref|YP_004933418.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
gi|355397892|gb|AER67321.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
Length = 870
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L +++ QDEA+ +++ + + R+G +D PRR I F F GP GK ++A
Sbjct: 569 LEEVLHQRVVGQDEAVKLVADAVLRARSGIKD-----PRRPIGSFIFLGPTGVGKTELAK 623
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LAE ++ ++N I D+ + + PP + GG +
Sbjct: 624 TLAEALFDSEDNLIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ------------LTE 671
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ +KP SV+ + ++KA V N L + + G+L DS+GR V N I + S+
Sbjct: 672 RVRRKPYSVILFDEIEKAHQDVFNILLQVLDDGRLTDSHGRTVDFRNTIIIMTSNI 727
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGAD 663
>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
inulinus CASD]
Length = 816
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EAI+ IS I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 508 LHERVIGQNEAINAISHAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 562
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E+ I D+ + + +PP + VG D G L + V +
Sbjct: 563 TLFGDEESIIRIDMSEYMEKHTTSRLVGSPPGY----VGHDE----GGQLTEKVR----Q 610
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ + ++KA V N L + + G+L DS GR V N + S+
Sbjct: 611 KPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNV 662
>gi|422867278|ref|ZP_16913875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
gi|329577560|gb|EGG58995.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
Length = 700
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 385 LHQRVVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 439
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 440 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 487
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 488 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 539
>gi|256831690|ref|YP_003160417.1| ATPase AAA-2 domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256685221|gb|ACV08114.1| ATPase AAA-2 domain protein [Jonesia denitrificans DSM 20603]
Length = 842
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ LA S+ LN + + + L +++ Q+ AI +SQ I + R G +D
Sbjct: 480 IAEVLAMSTGIPVTRLNAE-ESQRILNMEAELHKRVVGQNRAIKALSQAIRRTRAGLKD- 537
Query: 331 HGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYH 389
P+R F F GP GK ++A ALAE ++ ++ I D+ + GE + + +
Sbjct: 538 ----PKRPGGSFIFAGPTGVGKTELAKALAEYLFDDEDALIQLDMS-EFGEKHTASRLF- 591
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
G + G + ++ +KP SVV + V+KA + NSL + ++ G+L DS
Sbjct: 592 ----GSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEEGRLTDSQ 647
Query: 450 GREVSVSNAIFVTASSF 466
GR V N + + ++
Sbjct: 648 GRVVDFKNTVIIMTTNL 664
>gi|125623476|ref|YP_001031959.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris MG1363]
gi|389853802|ref|YP_006356046.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris NZ9000]
gi|124492284|emb|CAL97216.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris MG1363]
gi|300070224|gb|ADJ59624.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris NZ9000]
Length = 816
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 254 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 369 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHLDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|441511212|ref|ZP_20993101.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
gi|441444682|dbj|GAC51062.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
Length = 876
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 576 LHERVIGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAS 630
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + +G D G L + V +
Sbjct: 631 ALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----IGYDE----GGQLTEAVR----R 678
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 679 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 730
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N I + S+ D
Sbjct: 610 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGAD 664
>gi|297181778|gb|ADI17958.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Chloroflexi bacterium HF0200_09I09]
Length = 836
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI V+++ + + R G ++ P+R I F F GP GK +A LAE
Sbjct: 511 LDDRVIGQDEAIGVVAKAVRRARAGLKN-----PKRPIGAFMFLGPTGVGKTYLAETLAE 565
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G K+N + D+ + + +PP + VG D G L D V +
Sbjct: 566 FMFGSKDNIVRLDMSEFMEKHTVSRLVGSPPGY----VGYDD----GGQLTDLVR----R 613
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-----FVED 469
+ ++ L+ ++KA V N L + G L D+ GR+V N I + S+ +D
Sbjct: 614 RSYCLILLDEIEKAHPDVFNMLLQIFDDGHLSDAKGRKVDFRNTIIIMTSNVGSDLIRKD 673
Query: 470 ARI-LPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
R + D K +E++ R K ++T+ + P +NR
Sbjct: 674 TRFGFDTATDDAKTAEQQYERMKDKVTEEMKRVFRPEFINR 714
>gi|414156400|ref|ZP_11412702.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
gi|410870047|gb|EKS18006.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDM 722
>gi|419799744|ref|ZP_14325072.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
gi|385697244|gb|EIG27681.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDM 722
>gi|385825240|ref|YP_005861582.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii DPC 6026]
gi|329666684|gb|AEB92632.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii DPC 6026]
Length = 822
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|288574959|ref|ZP_06393316.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570700|gb|EFC92257.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 865
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ ++ + + R G +D PRR I F F GP GK ++A ALAE
Sbjct: 572 LHRRVIGQDEAVDLVVNAVMRARAGIKD-----PRRPIGSFIFLGPTGVGKTELAKALAE 626
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ + + +PP + GG + + +
Sbjct: 627 SLFDTEENIVRIDMSEYMEQHSVARLIGSPPGYVGYEDGGQ------------LTEAVRR 674
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV + ++KA V N L + + G++ DS+GR V N + + S+ + AR+L
Sbjct: 675 KPYSVVLFDEIEKAHREVFNVLLQILDDGRITDSHGRTVDFKNTVIIMTSN-IGSARLLQ 733
Query: 475 SEM 477
M
Sbjct: 734 GIM 736
>gi|403714711|ref|ZP_10940596.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
gi|403211238|dbj|GAB95279.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
Length = 877
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 26/191 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G +D PRR I F F GP GK ++A LA+
Sbjct: 575 LHERVVGQDEAVQLVADAIIRARSGVKD-----PRRPIGSFLFLGPTGVGKTELAKTLAQ 629
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +N + D+ + PP + GG + + +
Sbjct: 630 ALFDSGDNVVRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQ------------LTEAVRR 677
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV + ++KA V N+L + + G+L DS GR V N + + S+ ++ L
Sbjct: 678 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFRNTVIIMTSNI--GSQFLL 735
Query: 475 SEMKDCKFSEE 485
+KD + ++E
Sbjct: 736 DGVKDGEITQE 746
>gi|386712438|ref|YP_006178760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
gi|384071993|emb|CCG43483.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
Length = 819
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 513 LHNRVIGQDEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 567
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++
Sbjct: 568 SMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRN 615
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 616 KPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSN 666
>gi|297172680|gb|ADI23647.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF4000_15H13]
Length = 826
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q +AI IS+ I + R G +D PRR I F F+GP GK ++A ALAE
Sbjct: 519 LHKRIVGQQDAIEAISRAIRRSRAGLKD-----PRRPIGSFIFSGPTGVGKTELARALAE 573
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ ++ I D+ KF + G + G + + + ++P SVV
Sbjct: 574 FLFADRDALIRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVV 627
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 628 LLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 673
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ Q+EA+ +S+ I + R G +D P+R + F F GP GK ++A AL
Sbjct: 504 KILHERVIGQEEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARAL 558
Query: 359 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
AE ++G + I D+ + + PP + GG + ++
Sbjct: 559 AEAMFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKV 606
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ DA
Sbjct: 607 RRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGADA 664
>gi|256826525|ref|YP_003150484.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
gi|256582668|gb|ACU93802.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
Length = 871
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +++ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 554 MQGEMAKLADLEDRLHERVVGQDEAVSAVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 608
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 609 TGVGKTELAKALAEYLFDTERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 662
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P SV+ L+ ++KA V N L + + G+L D GR VS NAI + S+
Sbjct: 663 QLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 722
>gi|225175258|ref|ZP_03729254.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169434|gb|EEG78232.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 818
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHKRVIGQDEAVKAISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 564 SLFGDEDAMIRLDMSEYMEKHTTARLVGSPPGY----VGYDD----GGQLTEKVR----R 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ + ++KA V N L + ++ G+L D GR V N + + S+
Sbjct: 612 KPYSVILFDEIEKAHPEVFNVLLQVLEDGRLTDGKGRAVDFRNTVIIMTSN 662
>gi|130893190|gb|ABO32597.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 472
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|430371703|ref|ZP_19429425.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
gi|429515041|gb|ELA04572.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
Length = 372
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 246 EPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEK 305
E + + + + + LSG + ++ ++Q + L + + L L ++
Sbjct: 2 EKLEELIAVKEKSLSGYSTQVTEEDVAGVVSQWTGVPLQQLEKK-ESERLMELETILHQR 60
Query: 306 IDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYG 364
+ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE ++G
Sbjct: 61 VVGQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAEAMFG 115
Query: 365 GKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
+E I D+ + +PP + GG + ++ ++P S
Sbjct: 116 SEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQRPYS 163
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 164 VILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 211
>gi|403525254|ref|YP_006660141.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter sp.
Rue61a]
gi|403227681|gb|AFR27103.1| putative ATP-dependent Clp protease ATP-binding subunit
[Arthrobacter sp. Rue61a]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 492 LHKRVVGQNEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 546
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 547 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 600
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 601 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 646
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 609 KPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEA 664
>gi|410658561|ref|YP_006910932.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|410661548|ref|YP_006913919.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
gi|409020916|gb|AFV02947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|409023904|gb|AFV05934.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
Length = 827
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 257 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
+++SG S+ G N+L + S F L ++L L E + QDEA++ +
Sbjct: 481 EDISGIVSSW-TGVPVNKLEEGES---------FRLLKLESL---LHESVIGQDEAVTAV 527
Query: 317 SQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 375
+++I + R G +D P+R I F F GP GK ++A +LAE ++G + + I D+
Sbjct: 528 ARSIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTQLARSLAESLFGDENSLIRVDMS 582
Query: 376 PQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
+ + +PP + VG D G L + V +KP SV+ + ++KA
Sbjct: 583 EYMEKHAVSRMVGSPPGY----VGHDE----GGQLTEAVR----RKPYSVILFDEIEKAH 630
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
V N L + ++ G+L DS GR V N + + S+
Sbjct: 631 PEVFNILLQVLEDGRLTDSKGRLVDFRNCVLIMTSN 666
>gi|257417375|ref|ZP_05594369.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
gi|257159203|gb|EEU89163.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
Length = 831
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ I + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 516 LHQRVVSQNEAVEAVSRAIRRARSGLKD-----PARPIGSFMFLGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + +PP + GG + ++ +
Sbjct: 571 AMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQ------------LTEKIRQ 618
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 RPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|227544413|ref|ZP_03974462.1| ATP-binding Clp protease subunit [Lactobacillus reuteri CF48-3A]
gi|338202962|ref|YP_004649107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri SD2112]
gi|227185609|gb|EEI65680.1| ATP-binding Clp protease subunit [Lactobacillus reuteri CF48-3A]
gi|336448202|gb|AEI56817.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri SD2112]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 472
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|403070669|ref|ZP_10912001.1| ATP-dependent Clp proteinase [Oceanobacillus sp. Ndiop]
Length = 713
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 266 TVNGSISN-QLAQSSSSSCPDLNCQFD-LSNWKTLFRALTEKIDWQDEAISVISQTIAQR 323
T++ IS+ QL + P Q D K L L +++ QDEA++ +++ I +
Sbjct: 384 TLDVDISDIQLVVEEKTGIPVTKMQSDEQEKMKNLSDNLRKQVIGQDEAVNKVAKAIRRS 443
Query: 324 RTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 382
R G + H R I F F GP GK ++ LAE ++G +EN I D+
Sbjct: 444 RAGLKSKH-----RPIGSFLFVGPTGVGKTELTKVLAEELFGTRENMIRLDMSEY----- 493
Query: 383 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 442
K + G + G A + + + P S++ L+ ++KA VQN + ++
Sbjct: 494 -MEKHAVSKIIGSPPGYVGHEEAGQLTERVRRNPYSILLLDEIEKAHPDVQNMFLQIMED 552
Query: 443 GKLPDSYGREVSVSNAIFVTASS 465
G L DS+GR+VS + + S+
Sbjct: 553 GHLTDSHGRKVSFKETVIIMTSN 575
>gi|372488159|ref|YP_005027724.1| chaperone ATPase [Dechlorosoma suillum PS]
gi|359354712|gb|AEV25883.1| ATPase with chaperone activity, ATP-binding subunit [Dechlorosoma
suillum PS]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKSEVMDVLRGHFRPEFLNR 806
>gi|256372657|ref|YP_003110481.1| ATPase AAA-2 domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009241|gb|ACU54808.1| ATPase AAA-2 domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 829
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +I Q+EAIS +S+ I + R G +D PRR F F GP GK ++A LAE
Sbjct: 513 LHHRIVGQEEAISALSRAIRRTRAGLKD-----PRRPSGSFIFLGPTGVGKTELAKTLAE 567
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 568 FLFGDQDALIQLDMSEYMEKHTVARLVGAPPGY----VGYDE----GGQLTEAVR----R 615
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-VEDARIL 473
+P SVV + ++KA + N+L + ++ G+L D+ GR V N I + S+ +D +
Sbjct: 616 RPFSVVLFDEIEKAHPDIFNTLLQILEDGRLTDAQGRTVDFKNTILIMTSNLGTQD--LH 673
Query: 474 PSEMKDCKFSEEKIY-RAKSRLTQIL---IEPALVNR 506
+++ K SE+ + R K RL + L +P +NR
Sbjct: 674 RAQVGFAKSSEDVNHERMKMRLNEALKTHFKPEFLNR 710
>gi|134099492|ref|YP_001105153.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133912115|emb|CAM02228.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 602
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 273 LHKRIIGQDDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 327
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 328 FLFGDDDALVQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 381
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 382 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 427
>gi|119961353|ref|YP_945989.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
aurescens TC1]
gi|119948212|gb|ABM07123.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Arthrobacter aurescens TC1]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQNEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|357589640|ref|ZP_09128306.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
nuruki S6-4]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 530 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 584
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 585 FLFGDDDSLIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 638
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 639 LFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 684
>gi|116668736|ref|YP_829669.1| ATPase [Arthrobacter sp. FB24]
gi|116608845|gb|ABK01569.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVVGQNEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 568 FLFGEEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVRRRPFSVV 621
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 667
>gi|161525461|ref|YP_001580473.1| ATPase [Burkholderia multivorans ATCC 17616]
gi|160342890|gb|ABX15976.1| ATPase AAA-2 domain protein [Burkholderia multivorans ATCC 17616]
Length = 566
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 169 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 226
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 227 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 282
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 283 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 329
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 330 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 387
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 388 QRRLKARGAAGEEYEKTKSEVMDVLRGHFRPEFLNR 423
>gi|421176337|ref|ZP_15634004.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CI27]
gi|404531145|gb|EKA41111.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
aeruginosa CI27]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKETELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKSEVMDVLRGHFRPEFLNR 806
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ Q+EA+ IS+ + + R G +D P+R I F F GP
Sbjct: 492 AQTETEKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 461 VTASSFVEDA 470
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|337282845|ref|YP_004622316.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|387880440|ref|YP_006310743.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
gi|335370438|gb|AEH56388.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|386793888|gb|AFJ26923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
Length = 809
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDM 722
>gi|42518421|ref|NP_964351.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii NCC 533]
gi|41582706|gb|AAS08317.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii NCC 533]
Length = 822
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|421742208|ref|ZP_16180349.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|406689392|gb|EKC93272.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 864
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 241 SNEPKEPISK---DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKT 297
+ E KE I++ +L + G TV+ I++ LA+ + Q S +
Sbjct: 476 AGELKERIARIESELAGIEERREGVVEVTVD-DIADVLARRTGIPV----AQLTASEKEK 530
Query: 298 LFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRK 353
L + AL ++ QDEA++ +SQ + + R G D P R F F GP GK +
Sbjct: 531 LLKLEDALHSRVVGQDEAVTAVSQAVRRSRAGMGD-----PNRPTGSFLFLGPTGVGKTE 585
Query: 354 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
+A ALAE+++G + + D+ E V G + G A + ++
Sbjct: 586 LAKALAELLFGDENRMVRFDMS----EFQEKHTVSRLV--GAPPGYVGHEEAGQLTEKVR 639
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SV+ + ++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 640 RQPYSVLLFDEIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 692
>gi|429769570|ref|ZP_19301670.1| negative regulator of genetic competence ClpC/MecB [Brevundimonas
diminuta 470-4]
gi|429186626|gb|EKY27563.1| negative regulator of genetic competence ClpC/MecB [Brevundimonas
diminuta 470-4]
Length = 941
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ Q+EAI ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 590 LHERVIGQEEAIRAVADAVRLARAGLREGSGPTA----TFLFLGPTGVGKTELAKTLAEV 645
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + GE ++ PP + VG D G L + V +
Sbjct: 646 IFGDQDAMIRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 692
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 693 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 750
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ E + KS L ++L P +NR
Sbjct: 751 RNLTKRGSREFDEAKQKSELMEVLRGHFRPEFINR 785
>gi|419925000|ref|ZP_14442860.1| ATPase AAA-2 [Escherichia coli 541-15]
gi|388388188|gb|EIL49780.1| ATPase AAA-2 [Escherichia coli 541-15]
Length = 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GDKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + KS + +L P +NR
Sbjct: 772 RRLKAGGAAGEEYEKTKSEVMDVLRGHFRPEFINR 806
>gi|291452826|ref|ZP_06592216.1| chaperone [Streptomyces albus J1074]
gi|291355775|gb|EFE82677.1| chaperone [Streptomyces albus J1074]
Length = 844
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 241 SNEPKEPISK---DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKT 297
+ E KE I++ +L + G TV+ I++ LA+ + Q S +
Sbjct: 456 AGELKERIARIESELAGIEERREGVVEVTVD-DIADVLARRTGIPV----AQLTASEKEK 510
Query: 298 LFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRK 353
L + AL ++ QDEA++ +SQ + + R G D P R F F GP GK +
Sbjct: 511 LLKLEDALHSRVVGQDEAVTAVSQAVRRSRAGMGD-----PNRPTGSFLFLGPTGVGKTE 565
Query: 354 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
+A ALAE+++G + + D+ E V G + G A + ++
Sbjct: 566 LAKALAELLFGDENRMVRFDMS----EFQEKHTVSRLV--GAPPGYVGHEEAGQLTEKVR 619
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SV+ + ++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 620 RQPYSVLLFDEIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 672
>gi|256395560|ref|YP_003117124.1| ATP-dependent chaperone ClpB [Catenulispora acidiphila DSM 44928]
gi|256361786|gb|ACU75283.1| ATP-dependent chaperone ClpB [Catenulispora acidiphila DSM 44928]
Length = 886
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVRLVADAVIRSRSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ + PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLIGAPPGYVGYEEGGQLTE------------AVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ DS GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRTVDFRNTVIIMTSNL 728
>gi|227888861|ref|ZP_04006666.1| ATP-binding Clp protease subunit [Lactobacillus johnsonii ATCC
33200]
gi|227850698|gb|EEJ60784.1| ATP-binding Clp protease subunit [Lactobacillus johnsonii ATCC
33200]
Length = 828
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 524 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 578
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 579 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 628
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 629 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 678
>gi|325674654|ref|ZP_08154341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554240|gb|EGD23915.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 810
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 261 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 320
G S T I+ +A+S+ + Q D + L L +++ Q++A+ I++ +
Sbjct: 470 GTPSVTAE-DIAEIVARSTGIPASQM-TQKDKERLRRLEDELHQRVVGQEDAVKAIARAV 527
Query: 321 AQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 379
+ RTG D PRR + F F GP GK ++A ALA+ ++G + + D+ + G
Sbjct: 528 RRSRTGMGD-----PRRPVGSFLFLGPTGVGKTELAKALAQSLFGDESKMLRLDMS-EFG 581
Query: 380 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 439
E + + G + G A + ++ + P SV+ L+ ++KA V N L +
Sbjct: 582 ERHTASRLV-----GAPPGYVGYGEAGQLTEQVRRHPYSVILLDEIEKAHPDVFNVLLQV 636
Query: 440 IQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+ G+L D GR V N + + S+ D
Sbjct: 637 LDDGRLTDGQGRTVDFKNTVLIMTSNLGSD 666
>gi|257064641|ref|YP_003144313.1| chaperone ATPase [Slackia heliotrinireducens DSM 20476]
gi|256792294|gb|ACV22964.1| ATPase with chaperone activity, ATP-binding subunit [Slackia
heliotrinireducens DSM 20476]
Length = 865
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 250 KDLTERSQELSGCCSATVNGSIS----NQLAQ--SSSSSCPDLN-CQFDLSNWKTLFRAL 302
K+L E+ +E+ + + +I+ +A S S+ P N + + S + L
Sbjct: 460 KELQEKREEVMKKAAEEADRTITEVGEKDIADIISMSTGVPVSNLTEAETSKLLRMEEVL 519
Query: 303 TEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEI 361
E+I QDEA++ +S+ I + R+G +D PRR F F GP GK +++ ALAE
Sbjct: 520 HERIIGQDEAVTALSKAIRRSRSGLKD-----PRRPAGSFIFLGPSGVGKTELSKALAEF 574
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +E + D+ + + +PP + VG D G L V ++
Sbjct: 575 LFNSEEALVSFDMSEYMEKHSVSRLVGSPPGY----VGFDE----GGQLTKAVR----QR 622
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ + ++KA V N L + ++ G+L DS GR V N I + S+
Sbjct: 623 PYSVLLFDEIEKAHPDVFNILLQILEEGRLTDSQGRSVDFRNTIVIMTSN 672
>gi|297204729|ref|ZP_06922126.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197710804|gb|EDY54838.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 879
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ + PP + GG + + +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLVGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + V+KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEVEKAHTDVFNTLLQVLDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|395212959|ref|ZP_10400037.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
gi|394456926|gb|EJF11144.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
Length = 871
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D L R L ++ Q+EAI IS + + R G +D P+R I F F G
Sbjct: 551 LQSDREKLLNLERELGRRVAGQEEAIEAISDAVRRSRAGMQD-----PKRPIGSFIFLGT 605
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALA+ ++ + + D+ + PP + VG D
Sbjct: 606 TGVGKTELAKALADYLFNDENAMVRIDMSEYQERHAVSRMIGAPPGY----VGYDE---- 657
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
G L + V +KP SVV L+ ++KA V N L + + G+L DS GR V+ N I
Sbjct: 658 GGQLTEAVR----RKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVNFKNTII 713
Query: 461 VTASSFVEDARILPS--EMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ S+ + I+ S E D +E I R K + ++L + P +NR
Sbjct: 714 IMTSNI--GSHIIQSNFEQMDEFNHDEVIERTKDEVFELLKKSVRPEFLNR 762
>gi|409349505|ref|ZP_11232940.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
equicursoris CIP 110162]
gi|407878068|emb|CCK84998.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
equicursoris CIP 110162]
Length = 818
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++ I + R+G +D + R I F F GP GK ++A A+AE
Sbjct: 509 LHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLFLGPTGVGKTELAKAVAE 563
Query: 361 IIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
++G ++N I D+ D E ++ + G + + G ++ ++ + P SV
Sbjct: 564 AVFGSEDNIIRVDMSEYMDKEASSK-------LIGSAPGYVGYEEGGQLSNKVREHPYSV 616
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-----SFVEDARILP 474
V + V+KA+ + N L + + G L DS GR++ N I + S S ED ++
Sbjct: 617 VLFDEVEKANPEIFNVLLRVLDEGFLTDSLGRKIDFRNTIIIMTSNLGSRSLEEDNQVGF 676
Query: 475 SEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKL 532
++ K K +K+ +A T+ P +NR + + T++ + L RKL
Sbjct: 677 AKTKPDQAKVISDKVAKA----TKDFFRPEFLNRIDEKIVFKPLTAKQLRTIVTLLTRKL 732
Query: 533 IGR 535
+ R
Sbjct: 733 VKR 735
>gi|322390400|ref|ZP_08063922.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
gi|321142911|gb|EFX38367.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
Length = 809
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QD+A+S IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIR-----SNKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR++ SN I + S+
Sbjct: 604 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D + + KD +F + + + + P +NR + + S +SE M
Sbjct: 664 GATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSEDM 722
>gi|359150593|ref|ZP_09183427.1| chaperone [Streptomyces sp. S4]
Length = 864
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 241 SNEPKEPISK---DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKT 297
+ E KE I++ +L + G TV+ I++ LA+ + Q S +
Sbjct: 476 AGELKERIARIESELAGIEERREGVVEVTVD-DIADVLARRTGIPV----AQLTASEKEK 530
Query: 298 LFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRK 353
L + AL ++ QDEA++ +SQ + + R G D P R F F GP GK +
Sbjct: 531 LLKLEDALHSRVVGQDEAVTAVSQAVRRSRAGMGD-----PNRPTGSFLFLGPTGVGKTE 585
Query: 354 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
+A ALAE+++G + + D+ E V G + G A + ++
Sbjct: 586 LAKALAELLFGDENRMVRFDMS----EFQEKHTVSRLV--GAPPGYVGHEEAGQLTEKVR 639
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SV+ + ++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 640 RQPYSVLLFDEIEKAHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 692
>gi|423334774|ref|ZP_17312552.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri ATCC 53608]
gi|337728295|emb|CCC03390.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri ATCC 53608]
Length = 830
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALAAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 472
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|268318843|ref|YP_003292499.1| ATP-dependent Clp protease [Lactobacillus johnsonii FI9785]
gi|262397218|emb|CAX66232.1| ATP-dependent Clp protease [Lactobacillus johnsonii FI9785]
Length = 818
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEAIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ Q+ G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|117927429|ref|YP_871980.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117647892|gb|ABK51994.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 839
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDEAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDSLIQLDMS-EFMEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|429107069|ref|ZP_19168938.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 681]
gi|429109071|ref|ZP_19170841.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 507]
gi|426293792|emb|CCJ95051.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 681]
gi|426310228|emb|CCJ96954.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
malonaticus 507]
Length = 369
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 31 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 86
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 87 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 133
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 134 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 191
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 192 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 226
>gi|257055183|ref|YP_003133015.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256585055|gb|ACU96188.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 846
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+S +++ + + RTG A P R F F GP GK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVSAVAEAVRRARTGL-----AEPDRPSGSFLFLGPTGVGKTELARALAE 590
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ + D+ + GE + + G + G A + + +KP SV+
Sbjct: 591 ALFGSEDHMVRLDMS-EYGERHTASRLV-----GAPPGYVGYEEAGQLTEAVRRKPYSVI 644
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
L+ ++KA V N L + + G+L D GR V+ +N + + S+
Sbjct: 645 LLDEIEKAHPDVFNLLLQVMDDGRLTDGRGRTVNFTNTVLIMTSN 689
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 34/222 (15%)
Query: 261 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR---ALTEKIDWQDEAISVIS 317
G A V IS +A+ SS + + + + L R L E++ QDEAI+ +S
Sbjct: 464 GKADAVV---ISEDIAEIVSSWTGIPVTKLEEAETEKLLRLESELHERVIGQDEAINAVS 520
Query: 318 QTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP 376
+ + + R G + +P+R I F F GP GK ++A LAE ++ +E I D+
Sbjct: 521 EAVRRARAGLK-----APKRPIGSFIFLGPTGVGKTELAKTLAETMFNDEEAMIRVDMSE 575
Query: 377 QDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
+ + +PP + VG D G L + V ++P SV+ + ++KA
Sbjct: 576 YMEKHSVSRLVGSPPGY----VGHDE----GGQLTEPVR----RRPYSVILFDEIEKAHP 623
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS----FVE 468
V N L + ++ G L DS+GR+V N I V S+ F+E
Sbjct: 624 DVFNILLQILEDGVLTDSHGRKVDFKNTIVVMTSNVGADFIE 665
>gi|296111051|ref|YP_003621432.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc kimchii
IMSNU 11154]
gi|339491730|ref|YP_004706235.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc sp. C2]
gi|295832582|gb|ADG40463.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc kimchii
IMSNU 11154]
gi|338853402|gb|AEJ31612.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc sp. C2]
Length = 707
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 308
+ E +++SG AT + +N +AQS Q D+ KT+ L K+
Sbjct: 371 IAELEKKISGADEATKVIATANDVAQSVERLTGIPVSQMGASDIERLKTIGTRLAGKVIG 430
Query: 309 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 367
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 431 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 485
Query: 368 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 427
N + D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 486 NIVRLDMS-EYADLTAVSKLIGTTAGYVGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 540
Query: 428 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
A+ V L + + G+L D G V+ N + + S+
Sbjct: 541 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 578
>gi|227834051|ref|YP_002835758.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|262183463|ref|ZP_06042884.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|227455067|gb|ACP33820.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
Length = 925
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 531 LHKRIIGQDDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 585
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGSDDDLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|383826095|ref|ZP_09981237.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
gi|383333857|gb|EID12305.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
Length = 850
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|295108565|emb|CBL22518.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
obeum A2-162]
Length = 832
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA+ ++Q + + R G +D P R I F F GP GK +++
Sbjct: 510 LEKELHKRVIGQDEAVKAVAQAVKRGRVGLKD-----PHRPIGSFLFLGPTGVGKTELSK 564
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + +PP + VG D G L++ V
Sbjct: 565 ALAEAVFGSEQAMIRVDMSEYMEKHSVSKLIGSPPGY----VGYDE----GGQLSEKVR- 615
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+ P SV+ + ++KA V N L + + G + D++GR+V I + S+ A
Sbjct: 616 ---RNPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDAHGRKVDFKQTIIIMTSNVGAQA 672
Query: 471 RILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
I P ++ KD + E++ + L +P +NR
Sbjct: 673 IIEPKKLGFMSEKDDRQDYERMKSGVMEEVRRLFKPEFLNR 713
>gi|451936301|ref|YP_007460155.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777224|gb|AGF48199.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 861
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +I Q EA+ +S I + R G D S F F GP GK ++A ALA+
Sbjct: 569 LNSRIIGQSEAVRAVSDAILRARAGLSDQSRPSG----SFLFLGPTGVGKTELAKALADF 624
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +++ I D+ + + PP + GG Y+ + +K
Sbjct: 625 MFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 672
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPS 475
P SVV L+ V+KA + V N L + + G+L DS+GR V N + + S+ +
Sbjct: 673 PYSVVLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTVIIMTSNLGSNH---IQ 729
Query: 476 EMKDCKFSE-EKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMS 522
M D + E K+ + +LT + P +NR S SE M+
Sbjct: 730 SMIDSTYDEIRKVLMEELKLT---LRPEFLNRIDEIVFFHSLKSEQMA 774
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 511 LHDRVIGQDEAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 565
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 566 TLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGY----VGFDE----GGQLTEKVR----R 613
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 614 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSN 664
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 506 LHNRVIGQDEAVQSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 SLFGDEDAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTVVIMTSNV 660
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|373856910|ref|ZP_09599653.1| ATP-dependent chaperone ClpB [Bacillus sp. 1NLA3E]
gi|372453156|gb|EHP26624.1| ATP-dependent chaperone ClpB [Bacillus sp. 1NLA3E]
Length = 864
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEAI +++ + + R G +D P R I F F GP GK ++A LA
Sbjct: 571 LHERVIGQDEAIELVANAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAKTLAN 625
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E I D+ + + PP + GG L + V +
Sbjct: 626 ALFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ--------LTEAVR----R 673
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + + G++ DS+GR V N + + S+ + +L
Sbjct: 674 KPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSHGRTVDFKNTVIIMTSNL--GSHLLI 731
Query: 475 SE-MKDCKFSEE 485
E MKD SEE
Sbjct: 732 DEAMKDGNISEE 743
>gi|125534026|gb|EAY80574.1| hypothetical protein OsI_35755 [Oryza sativa Indica Group]
Length = 959
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
+L +I QDEA++ IS+ I + R G D PRR I F F GP GK ++A ALA
Sbjct: 640 SLHRRIVGQDEAVTAISRAIRRARVGLRD-----PRRPIASFIFAGPTGVGKSELAKALA 694
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
YG E + D+ + + +PP + GG + +
Sbjct: 695 AYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQ------------LTEAIR 742
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++P +VV + V+KA V N + + + G+L DS GR V N++ + S+
Sbjct: 743 RRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSN 794
>gi|116672360|ref|YP_833293.1| ATPase [Arthrobacter sp. FB24]
gi|116612469|gb|ABK05193.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 857
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 256 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 315
SQE G SA V + ++ ++ + D L L +++ Q++A+S+
Sbjct: 501 SQEGPGSESAVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSL 560
Query: 316 ISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 375
I++++ + RTG GA+ R F F GP GK ++A ALA ++G +++ I D+
Sbjct: 561 IAKSVRRNRTGM----GAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMS 616
Query: 376 PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNS 435
+ GE + + G + G A + + + P S+V L+ V+KA V N
Sbjct: 617 -EFGERHTVSRLV-----GAPPGYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNL 670
Query: 436 LSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L + + G+L D +GR V N + + S+
Sbjct: 671 LLQVLDDGRLTDGHGRTVDFRNTVVIMTSNL 701
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ IS+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 609 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEA 664
>gi|297181313|gb|ADI17504.1| hypothetical protein [uncultured bacterium HF0130_06E03]
Length = 821
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E+I Q++AI+ +S+ I + R G +D PR+ I F F GP GK ++A LAE
Sbjct: 505 LKERIVGQEQAIAAVSRAIRRTRAGLQD-----PRQPIGSFIFLGPTGVGKTELAKRLAE 559
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + + PP + VG D G L + V +
Sbjct: 560 FLFDDEDALISVDMSEYMEKFAVSRLIGAPPGY----VGFDE----GGQLTEKVR----R 607
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+P SV+ L+ ++KA V N L + + G+L DS GR+V SN + + S+
Sbjct: 608 RPYSVILLDEIEKAHPDVFNILLQILDEGRLTDSNGRKVDFSNTVLIMTSNI 659
>gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|125576822|gb|EAZ18044.1| hypothetical protein OsJ_33590 [Oryza sativa Japonica Group]
Length = 959
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
+L +I QDEA++ IS+ I + R G D PRR I F F GP GK ++A ALA
Sbjct: 640 SLHRRIVGQDEAVTAISRAIRRARVGLRD-----PRRPIASFIFAGPTGVGKSELAKALA 694
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
YG E + D+ + + +PP + GG + +
Sbjct: 695 AYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQ------------LTEAIR 742
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++P +VV + V+KA V N + + + G+L DS GR V N++ + S+
Sbjct: 743 RRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSN 794
>gi|383828348|ref|ZP_09983437.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383461001|gb|EID53091.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 843
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA++ +++++ + R G A P R F F GP GK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVAAVAESVRRARAGL-----AEPDRPSGSFLFLGPTGVGKTELARALAE 590
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E+ I D+ + GE + + G + G A + + ++P SV+
Sbjct: 591 ALFGSEESMIRLDMS-EYGERHTVSRLV-----GAPPGYVGYEEAGQLTEAVRRRPYSVI 644
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + ++ G+L D GR V+ +N + + S+
Sbjct: 645 LLDEIEKAHPDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 690
>gi|381209029|ref|ZP_09916100.1| ATP-dependent Clp proteinase [Lentibacillus sp. Grbi]
Length = 709
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 274 QLAQSSSSSCPDLNCQFD-LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHG 332
QL + P Q D + L + L EK+ QDEA+ +++ + + R G +
Sbjct: 389 QLIVEEKTGIPVTKLQTDEQEKMRDLGKNLGEKVIGQDEAVQKVAKAVRRSRAGLK---- 444
Query: 333 ASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV 391
S R I F F GP GK ++ ALAE ++G +++ I D+ K
Sbjct: 445 -SKYRPIGSFLFVGPTGVGKTELTKALAEELFGSRDSLIRLDMSEY------MEKHATSK 497
Query: 392 VGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGR 451
+ G + G A + ++ + P S++ L+ ++KA VQN + ++ G+L DS+GR
Sbjct: 498 IIGSPPGYVGHEEAGQLTEKVRRNPYSILLLDEIEKAHPDVQNMFLQIMEDGQLTDSHGR 557
Query: 452 EVSVSNAIFVTASS 465
VS + + + S+
Sbjct: 558 TVSFKDTVIIMTSN 571
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 511 LHDRVIGQDEAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 565
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 566 TLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGY----VGFDE----GGQLTEKVR----R 613
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 614 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSN 664
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ + + RTG +D P R I F F GP GK ++A ALAE
Sbjct: 563 LHKRVVGQDEAVKAVSEAVRRARTGLKD-----PNRPIGSFIFLGPTGVGKTELARALAE 617
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + GG + + +
Sbjct: 618 FLFGDEDAMIRIDMSEYMEKHTVSRLIGAPPGYVGHEEGGQLTE------------AVRR 665
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N L + + G+L DS+G+ V N + + S+
Sbjct: 666 KPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSHGKTVDFKNTVIIMTSNI 717
>gi|115485055|ref|NP_001067671.1| Os11g0267400 [Oryza sativa Japonica Group]
gi|75269548|sp|Q53LY0.1|CLPC3_ORYSJ RecName: Full=Chaperone protein ClpC3, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 3; AltName: Full=Casein lytic proteinase C3;
Flags: Precursor
gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|77549794|gb|ABA92591.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113644893|dbj|BAF28034.1| Os11g0267400 [Oryza sativa Japonica Group]
Length = 932
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
+L +I QDEA++ IS+ I + R G D PRR I F F GP GK ++A ALA
Sbjct: 613 SLHRRIVGQDEAVTAISRAIRRARVGLRD-----PRRPIASFIFAGPTGVGKSELAKALA 667
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
YG E + D+ + + +PP + GG + +
Sbjct: 668 AYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQ------------LTEAIR 715
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P +VV + V+KA V N + + + G+L DS GR V N++ + S+
Sbjct: 716 RRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSNV 768
>gi|291543530|emb|CBL16639.1| ATP-dependent chaperone ClpB [Ruminococcus champanellensis 18P13]
Length = 868
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P R I F F GP GK ++A ALAE
Sbjct: 572 LHQRVIGQDEAVEKVSEAILRSRAGIQD-----PDRPIGSFLFLGPTGVGKTELAKALAE 626
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ + N + D+ + + PP + VG D G L + V +
Sbjct: 627 ALFDDERNIVRIDMSEYMEKYSVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 674
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV + ++KA V N L + + G++ DS GR V N I + S+ DA IL
Sbjct: 675 KPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIILTSNLGSDA-ILN 733
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
D + S E A+ ++ +L P +NR
Sbjct: 734 GITADNQISPE----AREQVEALLKRQFRPEFLNR 764
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 510 LHDRVIGQDEAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 564
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + VG D G L + V +
Sbjct: 565 TLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGY----VGFDE----GGQLTEKVR----R 612
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 613 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSN 663
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 278 SSSSSCPDLN-CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
S+S+ P + + + + + +++ QDEAI +SQ I + R G +D + S
Sbjct: 493 SASTGIPVFKLTEEETDRLRNMEAEIHQRVIGQDEAIKSLSQAIRRTRAGLKDPNRPSG- 551
Query: 337 RDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDS 396
F F GP GK ++A ALAE ++G ++ I D+ + E + + + G
Sbjct: 552 ---SFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMS-EFQEKHTVSRLF-----GAP 602
Query: 397 VQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVS 456
+ G + ++ ++P SVV + V+KA + NSL + ++ G+L DS GR V
Sbjct: 603 PGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFK 662
Query: 457 NAIFVTASSF 466
N + + ++
Sbjct: 663 NTVIIMTTNL 672
>gi|428780885|ref|YP_007172671.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
gi|428695164|gb|AFZ51314.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
Length = 894
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q EA+S +S I + R G +D P R I F F GP GK ++A A+AE
Sbjct: 589 LHERVIGQKEAVSAVSAAIRRARAGMKD-----PARPIGSFLFMGPTGVGKTELARAMAE 643
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E+ I D+ + + PP + GG ++ ++ +
Sbjct: 644 FLFDTEESLIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQ------------LSEQIRR 691
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ V+KA V N L + + G++ DS GR + N I V S+ D IL
Sbjct: 692 RPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRVIDFRNTIIVMTSNIGGDD-ILQ 750
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSS----QKLSASETSEGMSHQ-----K 525
+D ++ E++ + + P +NR L E +E ++ Q K
Sbjct: 751 FSQEDSQY--EQMRKKVLEALRTHFRPEFLNRIDDLIIFHTLKREELAEIITIQLRRIEK 808
Query: 526 LLNKRKL 532
LL+++KL
Sbjct: 809 LLSQQKL 815
>gi|418576687|ref|ZP_13140820.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324844|gb|EHY91989.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 869
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++S + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTEAVR----R 672
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
P SV+ L+ ++KA V N L + ++ G+L DS GREV N I + S+ ++IL
Sbjct: 673 NPYSVILLDEIEKAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSNI--GSQILL 730
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+KD + +A +P ++NR
Sbjct: 731 ENVKDAGVITDDTEKAVMNSLNQYFKPEIINR 762
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQEEAVKAVSKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + VG D G L + V +
Sbjct: 561 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGY----VGYDE----GGQLTEKVR----R 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|421504377|ref|ZP_15951319.1| ATPase [Pseudomonas mendocina DLHK]
gi|400344932|gb|EJO93300.1| ATPase [Pseudomonas mendocina DLHK]
Length = 947
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 357
L + L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A A
Sbjct: 607 LEKRLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKA 662
Query: 358 LAEIIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAW 410
LAE +YG + + D+ + GE + PP + VG D G L + V
Sbjct: 663 LAESVYGSEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR- 712
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D
Sbjct: 713 ---RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD- 768
Query: 471 RILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
I+ +K + E+ + K+ + +L P +NR
Sbjct: 769 -IIQRRLKARGAAGEEYEKTKAEVMNVLRGHFRPEFLNR 806
>gi|354613927|ref|ZP_09031824.1| ATPase AAA-2 domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353221737|gb|EHB86078.1| ATPase AAA-2 domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 692
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+A++ +S+ + + RTG D P R + F F GP GK ++A ALA
Sbjct: 383 LHQRVIGQDDAVTAVSRAVRRNRTGMND-----PDRPVGTFLFLGPTGVGKTELAKALAG 437
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++N I D+ + GE + + G + G + + ++ ++P SV+
Sbjct: 438 SLFGDEDNMIRLDMS-EFGERHTVSRLV-----GSPPGYVGYDESGQLTEKVRRRPYSVI 491
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 480
L+ ++KA V N L + G+L D GR V+ +N + + S+ + I+ S +
Sbjct: 492 LLDEIEKAHPDVFNLLLQVFDDGRLTDGQGRTVNFTNTVLIMTSNL--GSEIISSRSGEF 549
Query: 481 KFS 483
FS
Sbjct: 550 GFS 552
>gi|408826581|ref|ZP_11211471.1| Clp protease ATP binding subunit [Streptomyces somaliensis DSM
40738]
Length = 867
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+SV+S+ + + R G D PRR I F F GP GK ++A AL++
Sbjct: 554 LRQRVVGQDEAVSVVSEAVLRSRAGLAD-----PRRPIGSFLFLGPTGVGKTELARALSD 608
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E + D+ E V G + G A + + + P S++
Sbjct: 609 ALFGSEERMVRLDMS----EFQERHTVSRLV--GAPPGYVGHEEAGQLTEAVRRHPYSLL 662
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ V+KA V N L + + G+L D+ GR V N + V S+
Sbjct: 663 LLDEVEKAHPDVFNILLQVLDDGRLTDAQGRTVDFKNTVVVMTSNL 708
>gi|406927447|gb|EKD63478.1| hypothetical protein ACD_51C00271G0002 [uncultured bacterium]
Length = 877
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 241 SNEPKEPISKDLTERSQEL---SGCCSATVNGSISNQLAQ---SSSSSCPDLN-CQFDLS 293
+NE K+ I K +T+ QEL S + T +G ++++ + SS S P + ++
Sbjct: 517 ANELKKEIVK-ITKEKQELEKQSKIRTGTESGKVTSEEIRELVSSWSGVPLTKLTEEEMD 575
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
L L K+ Q EAI IS+ + + R G +D P R + F F GP GK
Sbjct: 576 KLMKLEERLGNKVIGQKEAIKAISEAVRRGRAGLKD-----PNRPVGSFLFLGPTGVGKT 630
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 406
++ L E ++ KE I D+ + + +PP + GG
Sbjct: 631 ELTKVLTEELFADKEAMIRLDMSEYMEKHSVSKLIGSPPGYIGHEEGGQ----------- 679
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 680 -LTEKIRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVNFKNCVIIATSNI 738
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHKRVIGQDEAVLSVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + + PP + VG D G L + V +
Sbjct: 561 AMFGDEEAIIRIDMSEYMEKHSTSRLVGAPPGY----VGYDE----GGQLTEKVR----R 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV + V+KA V N + + ++ G+L D GR V N + + S+
Sbjct: 609 KPYSVVLFDEVEKAHPEVFNVMLQVLEDGRLTDGKGRTVDFRNTVIIMTSN 659
>gi|73663109|ref|YP_301890.1| ATPase subunit of an ATP-dependent protease [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495624|dbj|BAE18945.1| putative ATPase subunit of an ATP-dependent protease
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 869
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++S + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVSDAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTEAVR----R 672
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
P SV+ L+ ++KA V N L + ++ G+L DS GREV N I + S+ ++IL
Sbjct: 673 NPYSVILLDEIEKAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSNI--GSQILL 730
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+KD + +A +P ++NR
Sbjct: 731 ENVKDAGVITDDTEKAVMNSLNQYFKPEIINR 762
>gi|332671844|ref|YP_004454852.1| ATPase AAA-2 domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332340882|gb|AEE47465.1| ATPase AAA-2 domain protein [Cellulomonas fimi ATCC 484]
Length = 860
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQDAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRRPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|302556316|ref|ZP_07308658.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302473934|gb|EFL37027.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 879
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKLVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAR 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ M PP + GG + + +
Sbjct: 629 ALFDSEDNMVRLDMSEYQERHTVSRLMGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|241895220|ref|ZP_04782516.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
paramesenteroides ATCC 33313]
gi|241871526|gb|EER75277.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
paramesenteroides ATCC 33313]
Length = 834
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ Q+EA+S I+++I + R+G +D P+R I F F GP GK ++A
Sbjct: 519 LEKVLHNRVVGQNEAVSAIARSIRRARSGLKD-----PKRPIGTFLFLGPTGTGKTELAK 573
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ + + G + + G + ++ ++P
Sbjct: 574 ALAEAMFGSEDNMIRVDMS------EYREAYSASRLVGSAPGYVGYEEGGQLTEKVRRQP 627
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA + N + + G L DS GR+V N I + S+
Sbjct: 628 YSVVLLDEAEKAHPDIYNLMLQVFDDGFLTDSKGRKVDFRNTIIIMTSNL 677
>gi|295112200|emb|CBL28950.1| ATP-dependent chaperone ClpB [Synergistetes bacterium SGP1]
Length = 870
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LAE
Sbjct: 574 LHRRVVGQDEAVQLVADAVLRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAE 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN I D+ + + PP + VG D G L + V +
Sbjct: 629 ALFDSEENIIRIDMSEYMEKHSVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SV+ + ++KA V N L + + G++ DS+GR V N + + S+ A +L
Sbjct: 677 RPYSVILFDEIEKAHPDVFNILLQVLDDGRITDSHGRLVDFKNTVIIMTSNIGSSA-LLE 735
Query: 475 SEMKDCKFSE 484
D K SE
Sbjct: 736 GITADGKISE 745
>gi|449104805|ref|ZP_21741543.1| hypothetical protein HMPREF9730_02440 [Treponema denticola AL-2]
gi|448962941|gb|EMB43627.1| hypothetical protein HMPREF9730_02440 [Treponema denticola AL-2]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|42527541|ref|NP_972639.1| AAA ATPase [Treponema denticola ATCC 35405]
gi|449111455|ref|ZP_21748052.1| hypothetical protein HMPREF9735_01101 [Treponema denticola ATCC
33521]
gi|449113730|ref|ZP_21750213.1| hypothetical protein HMPREF9721_00731 [Treponema denticola ATCC
35404]
gi|41818126|gb|AAS12550.1| ATPase, AAA family [Treponema denticola ATCC 35405]
gi|448957813|gb|EMB38552.1| hypothetical protein HMPREF9721_00731 [Treponema denticola ATCC
35404]
gi|448958482|gb|EMB39213.1| hypothetical protein HMPREF9735_01101 [Treponema denticola ATCC
33521]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|408410506|ref|ZP_11181716.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
gi|408410727|ref|ZP_11181928.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
gi|407875066|emb|CCK83734.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
gi|407875287|emb|CCK83522.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus sp.
66c]
Length = 820
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++ I + R+G +D + R I F F GP GK ++A A+AE
Sbjct: 509 LHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLFLGPTGVGKTELAKAVAE 563
Query: 361 IIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
++G ++N I D+ D E ++ + G + + G ++ ++ + P SV
Sbjct: 564 AVFGSEDNIIRVDMSEYMDKEASSK-------LIGSAPGYVGYEEGGQLSNKVREHPYSV 616
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-----SFVEDARILP 474
V + V+KA+ + N L + + G L DS GR++ N I + S S ED ++
Sbjct: 617 VLFDEVEKANPEIFNVLLRVLDEGFLTDSLGRKIDFRNTIIIMTSNLGSRSLEEDNQVGF 676
Query: 475 SEMK--DCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGMSHQKLLNKRKL 532
++ K K +K+ +A T+ P +NR + + T++ + L RKL
Sbjct: 677 AKTKPDQAKVISDKVAKA----TKDFFRPDFLNRIDEKIVFKPLTAKQLRTIVTLLTRKL 732
Query: 533 IGR 535
+ R
Sbjct: 733 VKR 735
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +S+ + + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQEEAVEYVSRAVRRARVGLKD-----PKRPIGSFIFLGPTGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + N I D+ + + +PP + VG D G L + V +
Sbjct: 565 AMFGDENNIIRIDMSEYMEKHTVSRLVGSPPGY----VGYDE----GGQLTEKVR----R 612
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV + ++KA V N L + + G+L DS G+ VS +N I + S+
Sbjct: 613 KPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSKGKTVSFTNTIIIMTSN 663
>gi|419929161|ref|ZP_14446846.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Escherichia coli 541-1]
gi|388403818|gb|EIL64318.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Escherichia coli 541-1]
Length = 797
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL 498
+K ++E+ + K+ + +L
Sbjct: 772 RRLKARGAADEEYEKTKAEVMDVL 795
>gi|433650481|ref|YP_007295483.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
gi|433300258|gb|AGB26078.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
Length = 849
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEA 664
>gi|269955171|ref|YP_003324960.1| ATPase AAA-2 domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269303852|gb|ACZ29402.1| ATPase AAA-2 domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 852
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+ AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQEAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|228472974|ref|ZP_04057731.1| negative regulator of genetic competence ClpC/mecB [Capnocytophaga
gingivalis ATCC 33624]
gi|228275556|gb|EEK14333.1| negative regulator of genetic competence ClpC/mecB [Capnocytophaga
gingivalis ATCC 33624]
Length = 853
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q ++ +L + +TEK+ Q+EAIS I + I + RTG +D P R I F F G
Sbjct: 526 QSEMKKLSSLEQIITEKVIGQEEAISKIVKAIKRNRTGLKD-----PNRPIGSFIFIGQT 580
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++A LA ++ +E+ I D+ KF + G + G
Sbjct: 581 GVGKTQLAKILARELFDSEESLIRLDMSEY------MEKFTTSRLIGAPPGYVGHEEGGQ 634
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + +KP SV+ L+ ++KA V N L + + G L DS GR+V N I + S+
Sbjct: 635 LTERVRRKPYSVILLDEIEKAHPDVFNMLLQVLDDGFLTDSLGRKVDFRNTIIIMTSNI 693
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 560 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQ------------LTEKVRR 607
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + + G+L DS GR V SN I + S+ DA
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADA 663
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE D +E ++++ A+ G +LA++ ++ LN + + L E
Sbjct: 460 KEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHE 507
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QD A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 364 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 423
G +++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 563 GDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 616
Query: 424 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|146282702|ref|YP_001172855.1| chaperone-associated ATPase [Pseudomonas stutzeri A1501]
gi|145570907|gb|ABP80013.1| chaperone-associated ATPase, putative [Pseudomonas stutzeri A1501]
Length = 964
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 628 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAES 683
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+YG + + D+ + GE + PP + VG D G L + V +
Sbjct: 684 VYGNESALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 730
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 731 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 788
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 789 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 823
>gi|393775997|ref|ZP_10364294.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
PBA]
gi|392716940|gb|EIZ04517.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
PBA]
Length = 949
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLARAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|172035917|ref|YP_001802418.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354556035|ref|ZP_08975333.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171697371|gb|ACB50352.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353552034|gb|EHC21432.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 789
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E+I Q+EA+ +S+ I + R G ++ P+R I F F GP GK ++ ALA+
Sbjct: 474 LHERIIGQEEAVKAVSKAIRRSRIGLQN-----PKRPIASFIFAGPTGVGKTELTKALAQ 528
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G K+ I D+ + E + K G + F G + + +KP SVV
Sbjct: 529 FLFGSKDAMIRLDMS-EYMERHTVSKLI-----GTAPGFIGYEEGGQLTEAVRRKPYSVV 582
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 583 LFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLIIMTSNL 628
>gi|422420829|ref|ZP_16497782.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL S4-171]
gi|313639760|gb|EFS04509.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 783
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE D +E ++++ A+ G +LA++ ++ LN + + L E
Sbjct: 423 KEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHE 470
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QD A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 471 RVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 525
Query: 364 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 423
G +++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 526 GDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 579
Query: 424 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 580 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 622
>gi|19553872|ref|NP_601874.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62391515|ref|YP_226917.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032]
gi|21325450|dbj|BAC00072.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN)
[Corynebacterium glutamicum ATCC 13032]
gi|385144766|emb|CCH25805.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 925
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|449119612|ref|ZP_21756008.1| hypothetical protein HMPREF9725_01473 [Treponema denticola H1-T]
gi|449122003|ref|ZP_21758349.1| hypothetical protein HMPREF9727_01109 [Treponema denticola MYR-T]
gi|448949444|gb|EMB30269.1| hypothetical protein HMPREF9727_01109 [Treponema denticola MYR-T]
gi|448950602|gb|EMB31424.1| hypothetical protein HMPREF9725_01473 [Treponema denticola H1-T]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|325104507|ref|YP_004274161.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324973355|gb|ADY52339.1| ATPase AAA-2 domain protein [Pedobacter saltans DSM 12145]
Length = 847
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q D +F + EKI QDEAI +S+ I + R G +D P++ I F F GP
Sbjct: 514 QTDSQKLLGMFDKINEKIIGQDEAIKKLSKAIQRTRAGLKD-----PKKPIGSFIFLGPT 568
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++A LA ++ + I D+ KF + G + G
Sbjct: 569 GVGKTELAKELARFMFDADDALIQIDMS------EYMEKFAVSRLVGAPPGYVGYEEGGQ 622
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +KP +VV L+ ++KA V N L + + G+L DS GR+V N I + S+
Sbjct: 623 LTEKVRRKPYAVVLLDEIEKAHPDVFNILLQVLDEGQLTDSLGRKVDFRNTIIIMTSNI 681
>gi|302867374|ref|YP_003836011.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302570233|gb|ADL46435.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 849
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L EKI QD+A+S +++ + + RTG D P R + F F GP GK ++A ALAE
Sbjct: 532 LHEKIIGQDDAVSAVAEAVRRSRTGLAD-----PDRPMGSFLFLGPTGVGKTELARALAE 586
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ E V G + G A + + ++P +VV
Sbjct: 587 ALFGEADRMVRVDMS----EFQERHTVSRLV--GAPPGYVGYEEAGQLTEAVRRRPYAVV 640
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 641 LLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 686
>gi|300362397|ref|ZP_07058573.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
gasseri JV-V03]
gi|300353388|gb|EFJ69260.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
gasseri JV-V03]
Length = 822
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|320159824|ref|YP_004173048.1| ATP-dependent Clp protease ATP-binding subunit [Anaerolinea
thermophila UNI-1]
gi|319993677|dbj|BAJ62448.1| ATP-dependent Clp protease ATP-binding subunit [Anaerolinea
thermophila UNI-1]
Length = 818
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E+I QDEA+ I+ I + R+G +D PRR I F F GP GK ++A ALAE
Sbjct: 509 LHERIIGQDEAVHAIADAIRRARSGLKD-----PRRPIGSFIFIGPSGVGKTELARALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + PP + VG + G L + V +
Sbjct: 564 FLFGDEDALVRLDMSEYREQHTVSRLFGAPPGY----VGYEE----GGQLTEAVR----R 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-VEDAR-- 471
+P V+ + ++KA V N+L + + G+L D G V N + + S+ E R
Sbjct: 612 RPYRVILFDEIEKAHPEVWNALLQILDDGRLTDGQGHVVDFRNTVLIMTSNLGTEFVRRG 671
Query: 472 ----ILPSEMKDCKFSEEKIYRA 490
LPSE + + + +KI +A
Sbjct: 672 GTLGFLPSENSEDRQAHDKIEKA 694
>gi|123965471|ref|YP_001010552.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9515]
gi|123199837|gb|ABM71445.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. MIT 9515]
Length = 915
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
++EK+ Q +AI +S I + R G ++ P+R + F F GP GK ++A +LA
Sbjct: 611 ISEKVIGQKKAIEAVSSAIRRARVGMKN-----PKRPVGSFLFMGPTGVGKTELAKSLAS 665
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E + D+ + + PP + GG L + V +
Sbjct: 666 SLFDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQ--------LTEAVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-----VED 469
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+ +ED
Sbjct: 714 KPYSVILLDEIEKAHSEVFNVLLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKIILED 773
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
A+ +P+ ++ + E + + ++ + P +NR
Sbjct: 774 AKKIPNNKENSELREHALQESINKSLSSIFRPEFLNR 810
>gi|186474276|ref|YP_001861618.1| ATPase [Burkholderia phymatum STM815]
gi|184196608|gb|ACC74572.1| ATPase AAA-2 domain protein [Burkholderia phymatum STM815]
Length = 902
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ QDEA+ +S + + R G + H R F F GP GK ++A ALAE+
Sbjct: 585 LHQRVIGQDEAVVAVSDAVRRSRAGLQARH----RPTAVFLFLGPTGVGKTELAKALAEV 640
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G ++ + D+ + PP + VG D G L + V +K
Sbjct: 641 VFGDEDAMLRFDMSEYMERHTVARLIGAPPGY----VGYDE----GGQLTERVR----RK 688
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
P SV+ L+ ++KA V N L + G+L D GR V SN + + S+ D
Sbjct: 689 PYSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGAD 742
>gi|449105215|ref|ZP_21741920.1| hypothetical protein HMPREF9729_00185 [Treponema denticola ASLM]
gi|451969521|ref|ZP_21922750.1| hypothetical protein HMPREF9728_01951 [Treponema denticola US-Trep]
gi|448967202|gb|EMB47843.1| hypothetical protein HMPREF9729_00185 [Treponema denticola ASLM]
gi|451701618|gb|EMD56079.1| hypothetical protein HMPREF9728_01951 [Treponema denticola US-Trep]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|449129118|ref|ZP_21765349.1| hypothetical protein HMPREF9724_00014 [Treponema denticola SP37]
gi|448945960|gb|EMB26825.1| hypothetical protein HMPREF9724_00014 [Treponema denticola SP37]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|420156532|ref|ZP_14663374.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
gi|394757462|gb|EJF40494.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
Length = 821
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 26/192 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+S +S+ I + R G +D P+R + F F GP GK ++ ALAE
Sbjct: 515 LHQRLVGQEEAVSAVSRAIRRGRVGLKD-----PKRPVGSFIFLGPTGVGKTELTKALAE 569
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + +PP + VG D G L + V +
Sbjct: 570 AMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGY----VGYDE----GGQLTEAVR----R 617
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV + ++KA V N L + ++ G+L D+ GR+V N + + S+ AR++
Sbjct: 618 KPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDAQGRKVDFKNTVIIMTSNV--GARLIT 675
Query: 475 SEMKDCKFSEEK 486
+ F+ E+
Sbjct: 676 EKKGSLGFASEE 687
>gi|315506221|ref|YP_004085108.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|315412840|gb|ADU10957.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 849
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L EKI QD+A+S +++ + + RTG D P R + F F GP GK ++A ALAE
Sbjct: 532 LHEKIIGQDDAVSAVAEAVRRSRTGLAD-----PDRPMGSFLFLGPTGVGKTELARALAE 586
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ E V G + G A + + ++P +VV
Sbjct: 587 ALFGEADRMVRVDMS----EFQERHTVSRLV--GAPPGYVGYEEAGQLTEAVRRRPYAVV 640
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 641 LLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 686
>gi|425094865|ref|ZP_18497946.1| hypothetical protein HMPREF1308_05182 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405609330|gb|EKB82208.1| hypothetical protein HMPREF1308_05182 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 931
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 806
>gi|422341662|ref|ZP_16422603.1| AAA family ATPase [Treponema denticola F0402]
gi|325474501|gb|EGC77688.1| AAA family ATPase [Treponema denticola F0402]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +++ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 560 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQ------------LTEKVRR 607
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
KP SVV L+ ++KA V N L + + G+L DS GR V SN I + S+ DA
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADA 663
>gi|407718906|ref|YP_006796311.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc carnosum
JB16]
gi|407242662|gb|AFT82312.1| ATP-dependent proteinase ATP-binding subunit [Leuconostoc carnosum
JB16]
Length = 708
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 257 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDWQDEAI 313
+++SG AT + SN +A+S Q D+ KT+ + L K+ QDEA+
Sbjct: 377 KQISGADEATKVIATSNDVAESVERLTGIPVAQMGASDIERLKTIGQRLAGKVIGQDEAV 436
Query: 314 SVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICA 372
+++++ I + R G ++ + R I F F GP GK ++A LA ++G KEN +
Sbjct: 437 NMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKENIVRL 491
Query: 373 DLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHV 432
D+ + ++ K G TL + V + P S+V L+ ++KA+ V
Sbjct: 492 DMS-EYSDLTAVSKLIGTTAGYIGYDDNSNTLTEKVR----RNPYSIVLLDEIEKANPQV 546
Query: 433 QNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
L + + G+L D G V+ N + + S+
Sbjct: 547 LTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 579
>gi|312138354|ref|YP_004005690.1| clp peptidase ATP-binding subunit [Rhodococcus equi 103S]
gi|311887693|emb|CBH47005.1| putative Clp peptidase ATP-binding subunit [Rhodococcus equi 103S]
Length = 810
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 261 GCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTI 320
G S T I+ +A+S+ + Q D + L L ++ Q++A+ I++ +
Sbjct: 470 GTPSVTAE-DIAEIVARSTGIPASQM-TQKDKERLRRLEDELHRRVVGQEDAVKAIARAV 527
Query: 321 AQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDG 379
+ RTG D PRR + F F GP GK ++A ALA+ ++G + + D+ + G
Sbjct: 528 RRSRTGMGD-----PRRPVGSFLFLGPTGVGKTELAKALAQSLFGDESKMLRLDMS-EFG 581
Query: 380 EMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKA 439
E + + G + G A + ++ + P SV+ L+ ++KA V N L +
Sbjct: 582 ERHTASRLV-----GAPPGYVGYGEAGQLTEQVRRHPYSVILLDEIEKAHPDVFNVLLQV 636
Query: 440 IQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+ G+L D GR V N + + S+ D
Sbjct: 637 LDDGRLTDGQGRTVDFKNTVLIMTSNLGSD 666
>gi|310657487|ref|YP_003935208.1| protein disaggregation chaperone [[Clostridium] sticklandii]
gi|308824265|emb|CBH20303.1| protein disaggregation chaperone [[Clostridium] sticklandii]
Length = 753
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIA 357
L + L +++ QDEAIS IS+T+ + R+G R+ F F GP GK ++ A
Sbjct: 454 LEQRLHQRVIGQDEAISSISRTVRRNRSGFRKR-----RKPASFIFVGPTGVGKTEVVRA 508
Query: 358 LAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWE 411
LA+ ++G +++ I D+ + +PP + VG D G L + V
Sbjct: 509 LAKEMFGSEDDMIRIDMSEYMERHTVSKLIGSPPGY----VGYDE----GGQLTEKVR-- 558
Query: 412 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++P SV+ + ++KA V N L + ++ G+L D+ GR V N I V S+
Sbjct: 559 --RRPYSVILFDEIEKAHADVFNMLLQILEDGRLTDAQGRTVFFENTIIVMTSN 610
>gi|116628955|ref|YP_814127.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus gasseri ATCC 33323]
gi|116094537|gb|ABJ59689.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus gasseri ATCC 33323]
Length = 838
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 530 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 584
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 585 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 634
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 635 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 684
>gi|89099328|ref|ZP_01172205.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
gi|89085937|gb|EAR65061.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
Length = 708
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q + S K L ++L+EK+ Q+EA+ +++ + + R G + S R I F F GP
Sbjct: 404 QDEQSKMKNLEKSLSEKVIGQEEAVKKVAKAVRRSRAGLK-----SKNRPIGSFLFVGPT 458
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 401
GK ++ LAE ++G K++ I D+ + + +PP + VG D
Sbjct: 459 GVGKTELTKTLAEELFGSKDSMIRLDMSEYMEKHSISKIIGSPPGY----VGHDE----- 509
Query: 402 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 461
A + ++ + P S++ L+ ++KA VQ+ + ++ G+L DS GR VS +++ +
Sbjct: 510 ---AGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDSVII 566
Query: 462 TASS 465
S+
Sbjct: 567 MTSN 570
>gi|449116311|ref|ZP_21752762.1| hypothetical protein HMPREF9726_00747 [Treponema denticola H-22]
gi|448954198|gb|EMB34981.1| hypothetical protein HMPREF9726_00747 [Treponema denticola H-22]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|449124054|ref|ZP_21760373.1| hypothetical protein HMPREF9723_00417 [Treponema denticola OTK]
gi|448942385|gb|EMB23279.1| hypothetical protein HMPREF9723_00417 [Treponema denticola OTK]
Length = 832
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L + + QDE IS++S +I + R G +SP R I F F GP GK +A LAE
Sbjct: 509 LKKSVIGQDEPISILSNSIRRSRAGI-----SSPDRPIGSFLFLGPTGVGKTLLAKTLAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G KE I D+ + N PP + VG DS ++ ++ +
Sbjct: 564 FLFGTKEALIRVDMSDYMEKHNAAKLIGAPPGY----VGFDS--------GGFLTEKIRR 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SV+ L+ V+KA V N L + ++ G+L DS GR V+ N + + S+
Sbjct: 612 NPYSVLLLDEVEKAHPDVFNILLQILEEGELRDSSGRIVNFKNTVIIMTSN 662
>gi|342217527|ref|ZP_08710169.1| ATP-dependent chaperone protein ClpB [Megasphaera sp. UPII 135-E]
gi|341593874|gb|EGS36692.1| ATP-dependent chaperone protein ClpB [Megasphaera sp. UPII 135-E]
Length = 864
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L +++ QDEA+ ++S I + R G +D P+R I F F GP GK ++A
Sbjct: 563 LEETLHQRLIGQDEAVQIVSDAILRARAGIKD-----PQRPIGSFIFLGPTGVGKTELAK 617
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE+++ + N + D+ + + PP + VG D G L + V
Sbjct: 618 ALAEVLFNDERNIVRIDMSEYMEKHTVSRLIGAPPGY----VGYDE----GGQLTEAVR- 668
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ P SV+ L+ ++KA + N L + + G+L D GR V+ N I + S+
Sbjct: 669 ---RHPYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRMVNFKNTIIIMTSNL 721
>gi|297622426|ref|YP_003703860.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
gi|297163606|gb|ADI13317.1| ATP-dependent chaperone ClpB [Truepera radiovictrix DSM 17093]
Length = 862
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA++ ++ I + R G D P R I F F GP GK + A ALAE
Sbjct: 562 LHKRVVGQDEALTAVADAIRRARAGLSD-----PNRPIGSFIFLGPTGVGKTETAKALAE 616
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++ +EN I D+ + PP + +G D G L + V +
Sbjct: 617 LLFDTEENLIRLDMSEYMERHATARLIGAPPGY----IGYDE----GGQLTEAVR----R 664
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SV+ + ++KA V N+L + + G+L DS GR V N + + S+ + +IL
Sbjct: 665 RPYSVLLFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRNTVVIMTSN-IGSPQILE 723
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ + E I R L Q P +NR
Sbjct: 724 ASRSGADY--ESIKRTVFGLLQTHFRPEFLNR 753
>gi|291534335|emb|CBL07447.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis M50/1]
Length = 815
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
+ + L L +++ Q++A+S +++ + + R G +D PRR I F F GP GK
Sbjct: 504 ARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKD-----PRRPIGSFLFLGPTGVGK 558
Query: 352 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
+I+ ALAE ++G +++ I D+ + +PP + GG
Sbjct: 559 TEISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ---------- 608
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N I + S+
Sbjct: 609 --LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
Query: 466 FVEDARILPSEM 477
A I P ++
Sbjct: 667 AGAQAIIEPKKL 678
>gi|282852642|ref|ZP_06261984.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
gasseri 224-1]
gi|282556384|gb|EFB62004.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
gasseri 224-1]
Length = 822
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|336324767|ref|YP_004604733.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336100749|gb|AEI08569.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 903
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 542 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 596
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 597 FLFGEDDALVQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 650
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 651 LFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 696
>gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
gi|56908137|dbj|BAD62664.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
Length = 818
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 512 LHERVVGQEEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 566
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 567 TLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQ------------LTEKIRR 614
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + S+
Sbjct: 615 KPYSVILLDEIEKAHPDVFNLLLQVLEDGRLTDSKGRTVDFRNTAVIMTSNV 666
>gi|418246284|ref|ZP_12872681.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
gi|354509829|gb|EHE82761.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
Length = 925
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQDEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|227540962|ref|ZP_03971011.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183222|gb|EEI64194.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 870
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L ++I Q++A+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 586
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 587 LFGDDDSLIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 640
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 FDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|420143743|ref|ZP_14651240.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
gi|391856614|gb|EIT67154.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
Length = 816
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S+ I + R+G D RR + F F GP GK ++A
Sbjct: 511 LEKELHKRVVGQEEAISAVSRAIRRARSGIAD-----TRRPLGSFMFLGPTGVGKTELAK 565
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G +EN I D+ KF + G + G + ++ KP
Sbjct: 566 ALAESVFGSEENMIRVDMS------EFMEKFSTSRLIGAPPGYVGYDEGGQLTEQVRNKP 619
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA + N + + + G + D+ GR+V N I + S+
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|383807762|ref|ZP_09963321.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
gi|383298505|gb|EIC91121.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
Length = 825
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L +++ Q++AI+ +S+TI ++R G +D P+R F F GP GK ++A ALA
Sbjct: 514 GLHKRVIGQEQAIAALSKTIRRQRAGLKD-----PKRPSGSFIFAGPTGVGKTELAKALA 568
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ ++ I D+ + E + + + G F G + ++ +KP SV
Sbjct: 569 EFLFEDEDALIALDMS-EYSEKHTVSRLF-----GAPPGFVGYEEGGQLTEKIRRKPFSV 622
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V + ++KA + NSL + ++ G+L D GR V N I + ++
Sbjct: 623 VLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTIIIMTTNL 669
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
KE D +E ++++ A+ G +LA++ ++ LN + + L E
Sbjct: 460 KEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKL--LNME----------KLLHE 507
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QD A+ +S + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAESMF 562
Query: 364 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 423
G +++ I D+ KF + G + G + ++ +KP SVV L+
Sbjct: 563 GDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLD 616
Query: 424 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 EIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|329940378|ref|ZP_08289659.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
griseoaurantiacus M045]
gi|329300439|gb|EGG44336.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
griseoaurantiacus M045]
Length = 843
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L E++ QDEA+ +S+ + + R G ASP R I F F GP GK ++A
Sbjct: 537 LEKHLHERVVGQDEAVRAVSEAVLRSRAGL-----ASPDRPIGSFLFLGPTGVGKTELAR 591
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G +E + D+ + E + + G + G A + + + P
Sbjct: 592 ALAEALFGSEERMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHP 645
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
S++ L+ V+KA V N L + + G+L DS GR V ++ + V S+ +A
Sbjct: 646 YSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTHTVIVMTSNLGSEA 699
>gi|220930935|ref|YP_002507843.1| ATPase AAA-2 domain-containing protein [Halothermothrix orenii H
168]
gi|219992245|gb|ACL68848.1| ATPase AAA-2 domain protein [Halothermothrix orenii H 168]
Length = 806
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI +SQ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHKRVVGQDEAIQAVSQAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E + D+ + + +PP + GG + + +
Sbjct: 561 AMFNDEETMVRIDMSEYMEKHAVSRLVGSPPGYVGHEEGGQ------------LTEPIRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS----SFVE 468
+P SVV + ++KA V N L + ++ G L D++GR V N + + S +F+E
Sbjct: 609 RPYSVVLFDEIEKAHPDVFNILLQILEDGHLTDTHGRRVDFKNTVVIMTSNVGANFIE 666
>gi|161506865|ref|YP_001576819.1| ATP-dependent Clp protease [Lactobacillus helveticus DPC 4571]
gi|160347854|gb|ABX26528.1| ATP-dependent Clp protease [Lactobacillus helveticus DPC 4571]
Length = 826
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 350
L+N +++ L +++ QD+A+S +++ I + R+G +D RR I F F GP G
Sbjct: 511 LANLESI---LHKRVIGQDKAVSAVARAIHRSRSGIKDE-----RRPIGSFLFLGPTGVG 562
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 406
K ++A ++A ++G ++N I D+ ++ Q+ G + + G
Sbjct: 563 KTELAKSVAAAMFGSEDNLIRLDMS----------EYMDQIASSKLIGSAPGYVGYEEGG 612
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++ + P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 QLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 672
Query: 467 VEDARILPSEMKDCKFSEEKIYRAKSRLTQI------LIEPALVNR 506
+R L + K F+ +K+ +AK R ++ P +NR
Sbjct: 673 --GSRTL-FDSKAVGFNADKVDQAKVRQVKVQQAIKQFFRPEFLNR 715
>gi|91775523|ref|YP_545279.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
gi|91709510|gb|ABE49438.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
Length = 949
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX]
gi|71917007|gb|AAZ56909.1| ATPase [Thermobifida fusca YX]
Length = 830
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
+ E ++EL AT G +L + SS + + L +++ QD+
Sbjct: 472 VAEVNEELIAEVLATATGIPVFRLTEEESSRLLRMEEE------------LHKRVIGQDD 519
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
AI +SQ I + R G +D P+R F F GP GK ++ ALAE ++G ++ I
Sbjct: 520 AIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALI 574
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ + E + + + G + G + ++ +KP SVV + ++KA
Sbjct: 575 QLDMS-EFMEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHG 628
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ NSL + ++ G+L D+ GR V N I V ++
Sbjct: 629 DIFNSLLQVLEEGRLTDAQGRNVDFKNTIIVMTTNL 664
>gi|269793848|ref|YP_003313303.1| chaperone ATPase [Sanguibacter keddieii DSM 10542]
gi|269096033|gb|ACZ20469.1| ATPase with chaperone activity, ATP-binding subunit [Sanguibacter
keddieii DSM 10542]
Length = 858
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQDIAIKGLSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNL 664
>gi|320536680|ref|ZP_08036693.1| putative hemolysin B [Treponema phagedenis F0421]
gi|320146471|gb|EFW38074.1| putative hemolysin B [Treponema phagedenis F0421]
Length = 823
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +K+ QDEA+S++S I + R G ASP R I F F GP GK +A LAE
Sbjct: 501 LRKKVIGQDEAVSILSNAIRRSRAGI-----ASPERPIGSFLFLGPTGVGKTLLAKTLAE 555
Query: 361 IIYGGKENFICADLCPQDGEMNN------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G E+ I D+ + N PP + GG + ++ +
Sbjct: 556 FLFGSAESLIRIDMSDYMEKHNASRLVGAPPGYIGFENGG------------MLTEKVRR 603
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+P SV+ L+ ++KA + N L + ++ G+L D+ G V+ N + + S+
Sbjct: 604 QPYSVILLDEIEKAHPDIFNLLLQVLEEGELKDNLGHTVNFRNTVIIMTSN 654
>gi|227489371|ref|ZP_03919687.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090744|gb|EEI26056.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 870
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L ++I Q++A+ +S+ I + R G +D + S F F GP GK +++ ALAE
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKDPNRPSG----SFIFAGPSGVGKTELSKALAEF 586
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G ++ I D+ GE ++ KF + G + G + ++ +KP SVV
Sbjct: 587 LFGDDDSLIQIDM----GEFHD--KFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVL 640
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 641 FDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 685
>gi|357019920|ref|ZP_09082155.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
gi|356479956|gb|EHI13089.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
Length = 831
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 493 LHKRIIGQEDAVRAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDEDALIQIDM----GEYHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|386843476|ref|YP_006248534.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103777|gb|AEY92661.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796767|gb|AGF66816.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 847
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L R L +++ Q+EA++V+S+ + + R G +SP R I F F GP GK ++A
Sbjct: 533 LERHLHQRVVGQEEAVAVVSEAVLRSRAGL-----SSPNRPIGSFLFLGPTGVGKTELAR 587
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++ + D+ + E + + G + G A + + + P
Sbjct: 588 ALAEALFGSEDRMVRLDMS-EYQERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHP 641
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
S++ L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 642 YSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 695
>gi|152973457|ref|YP_001338508.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|296104033|ref|YP_003614179.1| ATPase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|380083243|ref|YP_005351258.1| chaperone ATPase [Klebsiella pneumoniae]
gi|419976211|ref|ZP_14491612.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419982068|ref|ZP_14497335.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987611|ref|ZP_14502727.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419993475|ref|ZP_14508415.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999395|ref|ZP_14514170.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420005258|ref|ZP_14519883.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010920|ref|ZP_14525385.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016708|ref|ZP_14530996.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022501|ref|ZP_14536668.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028229|ref|ZP_14542210.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420034070|ref|ZP_14547864.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420039602|ref|ZP_14553233.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420045582|ref|ZP_14559047.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420051299|ref|ZP_14564587.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420057063|ref|ZP_14570210.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420062373|ref|ZP_14575347.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420068381|ref|ZP_14581161.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420073763|ref|ZP_14586384.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420080227|ref|ZP_14592655.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084718|ref|ZP_14596968.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|425084431|ref|ZP_18487526.1| hypothetical protein HMPREF1306_05236 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428936892|ref|ZP_19010254.1| chaperone ATPase [Klebsiella pneumoniae JHCK1]
gi|428942019|ref|ZP_19015038.1| chaperone ATPase [Klebsiella pneumoniae VA360]
gi|442557562|ref|YP_007366492.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Klebsiella
pneumoniae]
gi|449307397|ref|YP_007439753.1| chaperone ATPase [Cronobacter sakazakii SP291]
gi|150958249|gb|ABR80278.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|295058492|gb|ADF63230.1| ATPase with chaperone activity [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|356596035|gb|AET17085.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae]
gi|397341222|gb|EJJ34406.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397341409|gb|EJJ34588.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397343913|gb|EJJ37053.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397358159|gb|EJJ50886.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358357|gb|EJJ51079.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397362499|gb|EJJ55148.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397374504|gb|EJJ66835.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397377252|gb|EJJ69487.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397384213|gb|EJJ76334.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397391916|gb|EJJ83734.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397393358|gb|EJJ85117.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397402600|gb|EJJ94197.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397409384|gb|EJK00699.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397409495|gb|EJK00808.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397419954|gb|EJK11065.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397426491|gb|EJK17308.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397428309|gb|EJK19052.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397437505|gb|EJK28067.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397441959|gb|EJK32321.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397449894|gb|EJK40014.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|405596937|gb|EKB70255.1| hypothetical protein HMPREF1306_05236 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426297405|gb|EKV59906.1| chaperone ATPase [Klebsiella pneumoniae JHCK1]
gi|426299433|gb|EKV61770.1| chaperone ATPase [Klebsiella pneumoniae VA360]
gi|440685610|gb|AGC23577.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Klebsiella
pneumoniae]
gi|449097430|gb|AGE85464.1| chaperone ATPase [Cronobacter sakazakii SP291]
Length = 931
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 806
>gi|87309320|ref|ZP_01091456.1| negative regulator of genetic competence ClpC/MecB [Blastopirellula
marina DSM 3645]
gi|87287959|gb|EAQ79857.1| negative regulator of genetic competence ClpC/MecB [Blastopirellula
marina DSM 3645]
Length = 849
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
K+ I K+ E+S++ G V I+ +++ + + + D + L
Sbjct: 468 KDSIIKEWQEKSRQKDGVVDEEV---IAEVVSKMTGIPLTRMTTE-DTMRLMQMEDELHR 523
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
K+ Q +AI +S+ + + R+G +D P+R F F GP GK +A ALAE ++
Sbjct: 524 KVISQHDAIKAVSKAVRRSRSGLKD-----PKRPTGCFVFAGPTGVGKTLLAKALAEFMF 578
Query: 364 GGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G + I D+ + N PP + GG + ++ ++P
Sbjct: 579 GDADALIQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRRRPY 626
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+VV L+ ++KA V N L + ++ G+L DS+GR V N I + ++
Sbjct: 627 AVVLLDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNVILIMTTN 674
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI IS + + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 508 LHKRVIGQDEAIRAISHAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 562
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ + + +PP + GG + ++ +
Sbjct: 563 TLFGDEEAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQ------------LTEKVRQ 610
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ + ++KA V N L + + G+L DS GR V N + S+ +
Sbjct: 611 KPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSN------VGA 664
Query: 475 SEMKDCKF 482
SE+K K+
Sbjct: 665 SELKRNKY 672
>gi|238853491|ref|ZP_04643869.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
gasseri 202-4]
gi|238833931|gb|EEQ26190.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
gasseri 202-4]
Length = 822
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 569 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 618
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|421470644|ref|ZP_15919011.1| Clp amino terminal domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|400227397|gb|EJO57403.1| Clp amino terminal domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 949
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKTEVMDVLRGHFRPEFLNR 806
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SLFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|347520959|ref|YP_004778530.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|385832322|ref|YP_005870097.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
gi|343179527|dbj|BAK57866.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|343181475|dbj|BAK59813.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
Length = 816
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EAIS +S+ I + R+G D RR + F F GP GK ++A
Sbjct: 511 LEKELHKRVVGQEEAISAVSRAIRRARSGIAD-----TRRPLGSFMFLGPTGVGKTELAK 565
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G +EN I D+ KF + G + G + ++ KP
Sbjct: 566 ALAESVFGSEENMIRVDMS------EFMEKFSTSRLIGAPPGYVGYDEGGQLTEQVRNKP 619
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA + N + + + G + D+ GR+V N I + S+
Sbjct: 620 YSVILLDEVEKAHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|284990567|ref|YP_003409121.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284063812|gb|ADB74750.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 847
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+A+ V+++ + + R G D P R I F F GP GK ++A ALAE
Sbjct: 536 LHQRVVGQDDAVRVVAEAVRRSRVGLGD-----PDRPIGSFLFLGPTGVGKTELARALAE 590
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ E V G + G A + + ++P SVV
Sbjct: 591 ALFGDEDRMIRLDMS----EFQERHTVSRLV--GSPPGYVGYEDAGQLTEAVRRRPYSVV 644
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N+L + + G+L DS GR V N + + S+
Sbjct: 645 LLDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFKNTVLIMTSNL 690
>gi|326335913|ref|ZP_08202090.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Capnocytophaga
sp. oral taxon 338 str. F0234]
gi|325691877|gb|EGD33839.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Capnocytophaga
sp. oral taxon 338 str. F0234]
Length = 876
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q ++ +L + +TEK+ Q+EAIS I + I + RTG +D P R I F F G
Sbjct: 549 QSEMKKLSSLEKLITEKVIGQEEAISKIVKAIKRNRTGLKD-----PNRPIGSFIFIGQT 603
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
GK ++A LA ++ +E+ I D+ KF + G + G
Sbjct: 604 GVGKTQLAKILARELFDSEESLIRLDMSEY------MEKFTTSRLIGAPPGYVGHEEGGQ 657
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + +KP +V+ L+ ++KA V N L + + G L DS GR+V N I + S+
Sbjct: 658 LTERVRRKPYAVILLDEIEKAHPDVFNMLLQVLDDGFLTDSLGRKVDFRNTIIIMTSNL 716
>gi|325102966|ref|YP_004272620.1| ATP-dependent chaperone ClpB [Pedobacter saltans DSM 12145]
gi|324971814|gb|ADY50798.1| ATP-dependent chaperone ClpB [Pedobacter saltans DSM 12145]
Length = 865
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEAI IS I + R G D ++ I F F G GK ++A ALAE
Sbjct: 564 LHKRVAGQDEAIEAISDAIRRSRAGLSDQ-----KKPIGSFIFLGTTGVGKTELAKALAE 618
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +++ I D+ + PP + VG D G L + V +
Sbjct: 619 FLFNDEQSMIRIDMSEYQERHAVSRLIGAPPGY----VGYDE----GGQLTEAVR----R 666
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + + G+L D+ GR V+ N I + S+ A ++
Sbjct: 667 KPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNI--GAHLIQ 724
Query: 475 SEMKDCKFS--EEKIYRAKSRLTQIL---IEPALVNR 506
K+ S EE I + K+ L ++L I P +NR
Sbjct: 725 DNFKNLDESNHEEVIAKTKNELFELLKQTIRPEFLNR 761
>gi|385680704|ref|ZP_10054632.1| ATPase with chaperone activity, ATP-binding subunit [Amycolatopsis
sp. ATCC 39116]
Length = 850
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 511 LHKRIIGQEDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 565
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 566 FLFGEDDALIQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 620 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 665
>gi|385839981|ref|YP_005863305.1| negative regulator of genetic competence [Lactobacillus salivarius
CECT 5713]
gi|300214102|gb|ADJ78518.1| Negative regulator of genetic competence [Lactobacillus salivarius
CECT 5713]
Length = 832
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|417809210|ref|ZP_12455892.1| negative regulator of genetic competence [Lactobacillus salivarius
GJ-24]
gi|335351166|gb|EGM52660.1| negative regulator of genetic competence [Lactobacillus salivarius
GJ-24]
Length = 832
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|319946100|ref|ZP_08020348.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|417919257|ref|ZP_12562792.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
gi|319747746|gb|EFV99991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|342833947|gb|EGU68226.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
Length = 809
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+A+S IS+ I + ++G H +R I F F GP GK ++A ALAE
Sbjct: 509 LHKRVIGQDQAVSSISRAIRRNQSGIRSH-----KRPIGSFLFLGPTGVGKTELAKALAE 563
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++ + I D+ KF + G + G + ++ KP SV+
Sbjct: 564 VLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVL 617
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSE 476
+ V+KA + N L + + G L DS GR+V SN I + S+ + D + +
Sbjct: 618 LFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFG 677
Query: 477 MKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
KD +F + + + + P +NR + + S TS+ M
Sbjct: 678 AKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSDQM 722
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 508 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 562
Query: 359 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 563 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 616
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 617 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 664
>gi|418960617|ref|ZP_13512504.1| negative regulator of genetic competence [Lactobacillus salivarius
SMXD51]
gi|380344284|gb|EIA32630.1| negative regulator of genetic competence [Lactobacillus salivarius
SMXD51]
Length = 832
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|417787245|ref|ZP_12434928.1| ATP-dependent Clp protease, ATP-binding subunit clpC [Lactobacillus
salivarius NIAS840]
gi|334307422|gb|EGL98408.1| ATP-dependent Clp protease, ATP-binding subunit clpC [Lactobacillus
salivarius NIAS840]
Length = 832
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|329996080|ref|ZP_08302384.1| negative regulator of genetic competence ClpC/MecB [Klebsiella sp.
MS 92-3]
gi|328539505|gb|EGF65506.1| negative regulator of genetic competence ClpC/MecB [Klebsiella sp.
MS 92-3]
gi|359730359|gb|AEV55104.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
pneumoniae]
Length = 949
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 629 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 684
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 685 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 731
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 732 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 789
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 790 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 824
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA++ ++ I + R G D PRR I F F GP GK ++ ALAE
Sbjct: 570 LRARVVGQDEAVTAVANAIRRSRAGLAD-----PRRPIGSFLFLGPTGVGKTELTKALAE 624
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +++ + D+ + + PP + GG Y+ + +
Sbjct: 625 FLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRR 672
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SV+ L+ V+KA V N L + + G+L D GR V N + V S+ D
Sbjct: 673 KPYSVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSD 727
>gi|260102347|ref|ZP_05752584.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|417013587|ref|ZP_11946672.1| ATP-dependent Clp protease [Lactobacillus helveticus MTCC 5463]
gi|112148328|gb|ABI13536.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
helveticus CNRZ32]
gi|260083856|gb|EEW67976.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|328463471|gb|EGF35122.1| ATP-dependent Clp protease [Lactobacillus helveticus MTCC 5463]
Length = 826
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 350
L+N +++ L +++ QD+A+S +++ I + R+G +D RR I F F GP G
Sbjct: 511 LANLESI---LHKRVIGQDKAVSAVARAIHRSRSGIKDE-----RRPIGSFLFLGPTGVG 562
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 406
K ++A ++A ++G ++N I D+ ++ Q+ G + + G
Sbjct: 563 KTELAKSVAAAMFGSEDNLIRLDMS----------EYMDQIASSKLIGSAPGYVGYEEGG 612
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++ + P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 QLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 672
Query: 467 VEDARILPSEMKDCKFSEEKIYRAKSRLTQI------LIEPALVNR 506
+R L + K F+ +K+ +AK R ++ P +NR
Sbjct: 673 --GSRTL-FDSKAVGFNADKVDQAKVRQAKVQQAIKQFFRPEFLNR 715
>gi|146307395|ref|YP_001187860.1| ATPase [Pseudomonas mendocina ymp]
gi|145575596|gb|ABP85128.1| ATPase AAA-2 domain protein [Pseudomonas mendocina ymp]
Length = 947
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+YG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 VYGSEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 806
>gi|420147739|ref|ZP_14655014.1| ATP-dependent proteinase [Lactobacillus gasseri CECT 5714]
gi|398400886|gb|EJN54417.1| ATP-dependent proteinase [Lactobacillus gasseri CECT 5714]
Length = 656
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+AIS +S+ I + R+G +D + R I F F GP GK ++A ALA
Sbjct: 348 LHERVIGQDKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVGKTELAKALAA 402
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLADYVAWELLKKP 416
++G + N I D+ ++ QV G + + G ++ + + P
Sbjct: 403 AVFGSERNIIRVDMS----------EYMDQVATSKLIGSAPGYVGYEEGGQLSERVRRNP 452
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 453 YSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 502
>gi|374624074|ref|ZP_09696555.1| ATPase with chaperone activity [Ectothiorhodospira sp. PHS-1]
gi|373943156|gb|EHQ53701.1| ATPase with chaperone activity [Ectothiorhodospira sp. PHS-1]
Length = 923
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 29/232 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 585 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 640
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 641 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 687
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 688 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 745
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNRSSSQKLSASETSEGMSH 523
+K + E+ + K+ + +L P +NR + + E +SH
Sbjct: 746 RRLKARGAAGEEYEKTKTEVMDVLRGHFRPEFLNRIEEIIVFHALGKEEISH 797
>gi|227530192|ref|ZP_03960241.1| ATP-binding Clp protease subunit [Lactobacillus vaginalis ATCC
49540]
gi|227349867|gb|EEJ40158.1| ATP-binding Clp protease subunit [Lactobacillus vaginalis ATCC
49540]
Length = 825
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ Q+EA+SV+++ I + R+G +D P+R I F F GP GK ++A
Sbjct: 511 LEKVLHNRVIGQNEAVSVVAKAIRRARSGLKD-----PQRPIGSFMFLGPTGVGKTELAK 565
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALA ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 566 ALAAAMFGSEDNMIRIDMS------EYMEKYSASRLIGAAPGYVGYDEGGQLTEKVRQHP 619
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA V N L + + G L D+ GR+V N I + S+
Sbjct: 620 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRKVDFRNTIIIMTSNL 669
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q EA++ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 509 LHGRVIGQSEAVTAVSKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++
Sbjct: 564 AMFGDEDAMIRIDMSEYMEKHTTSRLVGSPPGYVGYEEGGQ------------LTEKVRS 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ +
Sbjct: 612 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSN------VGA 665
Query: 475 SEMKDCKF 482
SE++ KF
Sbjct: 666 SELQKNKF 673
>gi|90961178|ref|YP_535094.1| negative regulator of genetic competence [Lactobacillus salivarius
UCC118]
gi|90820372|gb|ABD99011.1| Negative regulator of genetic competence [Lactobacillus salivarius
UCC118]
Length = 830
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 516 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 570
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 571 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 621
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 622 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 674
>gi|301299458|ref|ZP_07205734.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300852940|gb|EFK80548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 830
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 516 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 570
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 571 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 621
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 622 ---NNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 674
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL----NCQFDLSNWK---------- 296
+L +R EL +A ++ S A++ S L + Q +S+W
Sbjct: 530 ELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSD 589
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L +++ QDEA+ IS++I + R G ++ P R I F F GP
Sbjct: 590 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKN-----PNRPIASFIFAGPTGV 644
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 645 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 698
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 699 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 754
>gi|414085563|ref|YP_006994274.1| torsin family protein [Carnobacterium maltaromaticum LMA28]
gi|412999150|emb|CCO12959.1| torsin family protein [Carnobacterium maltaromaticum LMA28]
Length = 365
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ Q++A+S +S+ + + R+G +D P R I F F GP GK ++A
Sbjct: 47 LEKVLHSRVVGQEDAVSAVSRAMRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 101
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + +PP + VG D G L + +
Sbjct: 102 ALAESMFGSEDALIRVDMSEYMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 152
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 153 ---QKPYSVVLLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFKNTILIMTSNL 205
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 359 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|152964564|ref|YP_001360348.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151359081|gb|ABS02084.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 851
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 528 LHKRVIGQNDAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 583 FLFGEEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 637 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNL 682
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 359 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|269926504|ref|YP_003323127.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790164|gb|ACZ42305.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 815
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 46/275 (16%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTE 304
+ PIS+ +T +++++ A G NQ+ +S ++ + AL +
Sbjct: 466 EHPISETVT--AKDIAEVV-AQWTGVPVNQMLESETAKLAHME------------EALHK 510
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QD+AI +S I + R G D P R I F F GP GK ++A ALAE ++
Sbjct: 511 RVIGQDQAIQAVSDAIRRSRAGLSD-----PNRPIGSFIFLGPTGVGKTELARALAEFLF 565
Query: 364 GGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
+E + D+ + GE + +PP + VG D G L + V ++P
Sbjct: 566 DDREAMVRIDMS-EYGERHTVSRLIGSPPGY----VGYDE----GGQLTEVVR----RRP 612
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS----FVEDARI 472
V+ + ++KA V N + + + G+L D +GR V N + + S+ ++E +
Sbjct: 613 YQVILFDEIEKAHPEVFNVMLQILDDGRLTDGHGRTVDFRNTVIIMTSNVGTGWIEQYQP 672
Query: 473 LP-SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
L + D + ++K+ A +R + P +NR
Sbjct: 673 LGFTRAVDSRGEQKKLEDAVTRALRETFRPEFLNR 707
>gi|309780955|ref|ZP_07675694.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
5_7_47FAA]
gi|330824649|ref|YP_004387952.1| ATPase AAA-2 domain-containing protein [Alicycliphilus
denitrificans K601]
gi|404394131|ref|ZP_10985935.1| hypothetical protein HMPREF0989_02542 [Ralstonia sp. 5_2_56FAA]
gi|57282291|emb|CAD32531.1| putative clp protease [uncultured bacterium]
gi|308920258|gb|EFP65916.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
5_7_47FAA]
gi|329310021|gb|AEB84436.1| ATPase AAA-2 domain protein [Alicycliphilus denitrificans K601]
gi|348614517|gb|EGY64064.1| hypothetical protein HMPREF0989_02542 [Ralstonia sp. 5_2_56FAA]
Length = 949
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 EAKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKGEVMDVLRGHFRPEFLNR 806
>gi|255551163|ref|XP_002516629.1| conserved hypothetical protein [Ricinus communis]
gi|223544231|gb|EEF45753.1| conserved hypothetical protein [Ricinus communis]
Length = 864
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGH----EDHHGASPRRDIWFNFTGPDLC 349
N K L +L +K+ WQ + I I+ I + R+G + + R + W F G D
Sbjct: 614 NLKILCSSLEKKVPWQKDIIPEIATAILECRSGRSKSKRKSNNRAEREETWLFFLGVDSE 673
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK KIA LA ++YG + NF+ L + G D + G +
Sbjct: 674 GKEKIARELARLVYGSQANFVSIGLSNYSSTRTDSTDESKNKRGRDEL---GCGYHERFG 730
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 464
L + P V ++E+V++ D Q ++ KAI++GK+ G + +AI + S
Sbjct: 731 LALNENPHRVFFMEDVEQVDYCSQKAIKKAIESGKVALPGGENAPLKDAIIIFGS 785
>gi|153855899|ref|ZP_01996861.1| hypothetical protein DORLON_02886 [Dorea longicatena DSM 13814]
gi|149751802|gb|EDM61733.1| ATPase family associated with various cellular activities (AAA)
[Dorea longicatena DSM 13814]
Length = 811
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 24/175 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++ ++++I + R G +D P+R I F F GP GK +++
Sbjct: 502 LEQTLHKRVIGQDEAVTAVAKSIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 556
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G + + I D+ + + +PP + VG D G L++ V
Sbjct: 557 ALAEALFGDENSMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 607
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ P SVV + ++KA V N L + + G + DS GR+V SN + + S+
Sbjct: 608 ---RHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFSNTVIIMTSN 659
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 359 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|288920262|ref|ZP_06414576.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288348366|gb|EFC82629.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 881
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R G D RR + F F GP GK ++A AL E
Sbjct: 574 LHERVVGQDEAVGLVADAVIRARAGIRDQ-----RRPVGSFLFLGPTGVGKTELARALCE 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + +PP + GG + + +
Sbjct: 629 ALFDSEDAMIRIDMSEYQERHTVSRLIGSPPGYVGHEEGGQLTE------------AVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV L+ ++KA V N+L + + G+L D GR VS S+ + + S+ + +L
Sbjct: 677 KPYSVVLLDEIEKAHTDVFNTLLQVLDDGRLTDGRGRTVSFSDTVIIMTSN-IGSQWLLD 735
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 506
D EE A+SR+T L E P +NR
Sbjct: 736 GVGPDGDIDEE----ARSRVTAELRERFRPEFLNR 766
>gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 817
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL E+I Q+EAIS +++ + + R G +D PRR I F F GP GK +A ALA
Sbjct: 504 ALHERIVGQEEAISTMAKAVRRARAGLKD-----PRRPIGSFIFLGPTGVGKTLLARALA 558
Query: 360 EIIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
E ++G ++ I D+ + E +N PP + GG L + V
Sbjct: 559 EFMFGSEDALIKIDMS-EFMERHNVSRLVGAPPGYIGYEEGGQ--------LTEAVR--- 606
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+K SV+ L+ ++KA N L + ++ G L D+ GR V N I + S+
Sbjct: 607 -RKSYSVILLDEIEKAHPEAFNMLLQILEDGNLTDAKGRRVDFRNTIIIMTSNI 659
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L KI Q EA++ +S I + R G D S F F GP GK ++A ALA+
Sbjct: 569 LNSKIIGQSEAVNAVSDAILRARAGLSDQSRPSG----SFLFLGPTGVGKTELAKALADF 624
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +++ I D+ + + PP + GG Y+ + +K
Sbjct: 625 MFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 672
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + + G+L DS+GR V N I + S+
Sbjct: 673 PYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNL 723
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 503 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 557
Query: 359 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 558 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 611
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 612 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|407985354|ref|ZP_11165952.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
gi|407373047|gb|EKF22065.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
Length = 822
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDEDALIQIDM----GEYHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|148544707|ref|YP_001272077.1| ATPase [Lactobacillus reuteri DSM 20016]
gi|184154059|ref|YP_001842400.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri JCM 1112]
gi|227363830|ref|ZP_03847937.1| ATP-binding Clp protease subunit [Lactobacillus reuteri MM2-3]
gi|325683041|ref|ZP_08162557.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri MM4-1A]
gi|148531741|gb|ABQ83740.1| ATPase AAA-2 domain protein [Lactobacillus reuteri DSM 20016]
gi|183225403|dbj|BAG25920.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri JCM 1112]
gi|227071187|gb|EEI09503.1| ATP-binding Clp protease subunit [Lactobacillus reuteri MM2-3]
gi|324977391|gb|EGC14342.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
reuteri MM4-1A]
Length = 830
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++V+++ I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHQRVIGQDEAVTVVAKAIRRARSGLKD-----PSRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
AL+ ++G ++N I D+ K+ + G + + G + ++ + P
Sbjct: 567 ALSAAMFGSEDNMIRIDMS------EYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 620
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 472
SVV L+ +KA V N L + + G L D+ GR V N I + S+ ++D +
Sbjct: 621 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKE 680
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ KD + A + ++ P +NR
Sbjct: 681 VGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNR 714
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +I Q+EA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHSRIIGQEEAVIAVSKAVRRARAGLKD-----PKRPIGSFVFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|226323338|ref|ZP_03798856.1| hypothetical protein COPCOM_01112 [Coprococcus comes ATCC 27758]
gi|225208022|gb|EEG90376.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus comes ATCC 27758]
Length = 815
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 295 WKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRK 353
K L + L +++ Q+EAI +S+ + + R G +D P R I F F GP GK +
Sbjct: 502 LKKLDKTLEKRVIGQEEAIQALSKAVKRGRVGLKD-----PARPIGSFLFLGPTGVGKTE 556
Query: 354 IAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADY 407
++ ALAE ++G +E+ I D+ + +PP + GG
Sbjct: 557 LSKALAEALFGNEEDMIRVDMSEYMEKHSVSKMIGSPPGYVGHEDGGQ------------ 604
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFV 467
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N + + S+
Sbjct: 605 LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAG 664
Query: 468 EDARILPSEM 477
A I P ++
Sbjct: 665 AKAIIEPKKL 674
>gi|170016555|ref|YP_001727474.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum KM20]
gi|414597722|ref|ZP_11447282.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE E16]
gi|169803412|gb|ACA82030.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum KM20]
gi|390481561|emb|CCF29343.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE E16]
Length = 706
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 308
+ E ++++G AT + +N +A+S Q D+ KT+ + L K+
Sbjct: 370 IAELEKKIAGADEATKVVATTNDVAESVERLTGIPVSQMGASDIERLKTIGQRLAGKVIG 429
Query: 309 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 367
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 430 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 484
Query: 368 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 427
N I D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 485 NIIRLDMS-EYSDLTAVSKLIGTTAGYIGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 539
Query: 428 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
A+ V L + + G+L D G V+ N + + S+
Sbjct: 540 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|386811802|ref|ZP_10099027.1| ATPase [planctomycete KSU-1]
gi|386404072|dbj|GAB61908.1| ATPase [planctomycete KSU-1]
Length = 826
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 263 CSATVNGSISNQLAQSSSSSCPDLNC-QFDLSNWKTLFRA---LTEKIDWQDEAISVISQ 318
A V G +++++ S + + + + K L R L + + Q+EA+ I++
Sbjct: 468 TRAEVEGVVNSEIVAEVVSKMTGIPITRIESAEAKRLLRMEEELHKMVISQEEAVKAIAK 527
Query: 319 TIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQ 377
I + R G ++ P R + F F GP GK +A +LA+ ++G +E I D+
Sbjct: 528 AIRRSRAGLKN-----PNRPVASFIFVGPSGVGKTHLARSLAKFLFGEEEALIQIDMSEY 582
Query: 378 DGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVH 431
+ N PP + GG + ++ ++P +VV L+ ++KA
Sbjct: 583 MEKHNISRLIGAPPGYIGYEEGGQ------------LTEKIRRRPYAVVLLDEIEKAHPD 630
Query: 432 VQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
V N L + ++ GKL DS+GR V N + + S+ D
Sbjct: 631 VFNMLLQIMEDGKLTDSFGRHVDFRNVVIIMTSNIGADV 669
>gi|254423501|ref|ZP_05037219.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190990|gb|EDX85954.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 941
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q EA++ +S I + R G +D P R I F F GP GK ++A ALA
Sbjct: 582 LHERVIGQSEAVTAVSAAIRRARAGMKD-----PGRPIGSFLFMGPTGVGKTELARALAS 636
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
++ +E I D+ + E N+ PP + GG ++ +
Sbjct: 637 FLFDTEEALIRLDMS-EYMEKNSVSRLVGAPPGYVGYEEGGQ------------LSEAVR 683
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+ P SVV L+ V+KA V N L + + G++ DS GR V N + V S+ + IL
Sbjct: 684 RHPYSVVLLDEVEKAHTDVFNILLQVLDDGRITDSQGRTVDFRNTVIVMTSN-IGSEYIL 742
Query: 474 PSEMKDCKFSE 484
D KFSE
Sbjct: 743 DVSGDDAKFSE 753
>gi|392943462|ref|ZP_10309104.1| ATP-dependent chaperone ClpB [Frankia sp. QA3]
gi|392286756|gb|EIV92780.1| ATP-dependent chaperone ClpB [Frankia sp. QA3]
Length = 875
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+S+++ + + R+G +D PRR + F F GP GK ++A L+E
Sbjct: 574 LHQRVVGQDEAVSLVADAVIRARSGIKD-----PRRPVGSFIFLGPTGVGKTELARTLSE 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E I D+ + +PP + GG + + +
Sbjct: 629 ALFDSEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTE------------AVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G+L D+ GR V+ +N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNI 728
>gi|429757829|ref|ZP_19290359.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 181 str. F0379]
gi|429174420|gb|EKY15897.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 181 str. F0379]
Length = 821
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD A+ ++Q+I + R+G +D P+R F F GP GK ++A ALAE
Sbjct: 516 LHKRVIGQDAAVKALAQSIRRTRSGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 570
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 571 FLFGDEDALIQLDMS-EFSEKHTSSRLF-----GAPPGYVGYDEGGELTEKVRRRPFSVV 624
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR+V N + + ++
Sbjct: 625 LFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 670
>gi|423618579|ref|ZP_17594413.1| chaperone ClpB [Bacillus cereus VD115]
gi|401253156|gb|EJR59400.1| chaperone ClpB [Bacillus cereus VD115]
Length = 866
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + RTG +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARTGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLDGLEEDGSIKEE 744
>gi|330468567|ref|YP_004406310.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328811538|gb|AEB45710.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 851
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L EK+ QD+A++ +++ + + RTG D H R F F GP GK ++A ALAE
Sbjct: 533 LHEKVIGQDDAVNAVAEAVRRSRTGLADPH----RPMGSFLFLGPTGVGKTELARALAEA 588
Query: 362 IYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVY 421
++G + + D+ E V G + G A + + ++P +VV
Sbjct: 589 LFGEADRMVRVDMS----EFQERHTVSRLV--GAPPGYVGYEEAGQLTEAVRRRPYAVVL 642
Query: 422 LENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 643 LDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQEEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|405984332|ref|ZP_11042635.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
gi|404388164|gb|EJZ83248.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
Length = 906
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q ++S L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 557 MQGEMSKLMDLEVKLHERVVGQDEAVSAVASAIRRSRAGLSD-----PDRPIGSFLFLGP 611
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDDERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P SV+ L+ ++KA V N L + + G+L D GR VS N I + S+
Sbjct: 666 QLTEAVRRRPYSVILLDEMEKAHQDVFNILLQVLDDGRLTDGQGRVVSFKNTIIIMTSNV 725
>gi|421876177|ref|ZP_16307736.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C10]
gi|421879651|ref|ZP_16311113.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C11]
gi|372557928|emb|CCF23856.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C10]
gi|390446476|emb|CCF27233.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C11]
Length = 706
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQF---DLSNWKTLFRALTEKIDW 308
+ E ++++G AT + +N +A+S Q D+ KT+ + L K+
Sbjct: 370 IAELEKKIAGADEATKVVATTNDVAESVERLTGIPVSQMGASDIERLKTIGQRLAGKVIG 429
Query: 309 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 367
QDEA++++++ I + R G ++ + R I F F GP GK ++A LA ++G KE
Sbjct: 430 QDEAVNMVARAIRRNRAGFDEGN-----RPIGSFLFVGPTGVGKTELAKQLALDMFGSKE 484
Query: 368 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 427
N I D+ + ++ K G TL + V + P S+V L+ ++K
Sbjct: 485 NIIRLDMS-EYSDLTAVSKLIGTTAGYIGYDDNSNTLTEKVR----RNPYSIVLLDEIEK 539
Query: 428 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
A+ V L + + G+L D G V+ N + + S+
Sbjct: 540 ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|428777732|ref|YP_007169519.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
gi|428692011|gb|AFZ45305.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
Length = 898
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q EA++ +S I + R G +D P R I F F GP GK ++A A+AE
Sbjct: 592 LHERVIGQKEAVAAVSAAIRRARAGMKD-----PARPIGSFLFMGPTGVGKTELARAIAE 646
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E+ I D+ + + PP + GG ++ ++ +
Sbjct: 647 FLFDSEESLIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQ------------LSEQIRR 694
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-VEDARIL 473
+P SVV L+ V+KA V N L + + G++ DS GR V N I V S+ ED IL
Sbjct: 695 RPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNTIIVMTSNIGGED--IL 752
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQILIE---PALVNR 506
+D ++ + + ++ Q L E P +NR
Sbjct: 753 QFAQEDSQYEQ-----MRKKVLQALREHFRPEFLNR 783
>gi|357048825|ref|ZP_09110059.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
gi|355384778|gb|EHG31836.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
Length = 824
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 510 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 564
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ + D+ + +PP + VG D G L + +
Sbjct: 565 ALAEAMFGSEDSLVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 615
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 616 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 668
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHERVIGQEEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|222616839|gb|EEE52971.1| hypothetical protein OsJ_35634 [Oryza sativa Japonica Group]
Length = 832
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL----NCQFDLSNWK---------- 296
+L +R EL +A ++ S A++ S L + Q +S+W
Sbjct: 443 ELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSD 502
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L +++ QDEA+ IS++I + R G ++ P R I F F GP
Sbjct: 503 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKN-----PNRPIASFIFAGPTGV 557
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 558 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 611
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 612 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 667
>gi|152968278|ref|YP_001364062.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151362795|gb|ABS05798.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 840
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 513 LHKRVIGQNDAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 567
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 568 FLFGEEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 621
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 622 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNL 667
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
K L L E++ QDEA+S +S+ I + R G +D P R I F F GP GK
Sbjct: 507 RLKKLESVLHERVIGQDEAVSAVSRAIRRGRVGLKD-----PHRPIGSFLFLGPTGVGKT 561
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 406
+++ ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 562 ELSKALAEAMFGTEQALIRVDMSEYMEKHSVSKIVGSPPGYVGYEEGGQ----------- 610
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++ ++ + P SV+ + ++KA V N L + + G + DS GR++ N + + S+
Sbjct: 611 -LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFKNTVLIMTSN 668
>gi|402698425|ref|ZP_10846404.1| ATP-dependent chaperone protein ClpB [Pseudomonas fragi A22]
Length = 855
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ +S + + R G D + S F F GP GK ++ ALAE
Sbjct: 567 LHERVIGQDEAVVAVSNAVRRSRAGLSDPNRPSG----SFMFLGPTGVGKTELCKALAEF 622
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +E + D+ + + PP + GG Y+ + +K
Sbjct: 623 LFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 670
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SV+ L+ V+KA V N L + ++ G+L DS+GR V N + V S+
Sbjct: 671 PYSVILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 721
>gi|257871152|ref|ZP_05650805.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
gi|257805316|gb|EEV34138.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
Length = 827
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 513 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 567
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ + D+ + +PP + VG D G L + +
Sbjct: 568 ALAEAMFGSEDSLVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 618
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 619 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 671
>gi|315274644|ref|ZP_07869487.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria marthii FSL S4-120]
gi|313615725|gb|EFR89010.1| negative regulator of genetic competence ClpC/MecB [Listeria
marthii FSL S4-120]
Length = 338
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ QD A+ +S + + R G +D P+R I F F GP GK ++A AL
Sbjct: 21 KLLHERVIGQDAAVKAVSLAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAL 75
Query: 359 AEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLS 418
AE ++G +++ I D+ KF + G + G + ++ +KP S
Sbjct: 76 AESMFGDEDSMIRIDMS------EYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYS 129
Query: 419 VVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
VV L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 130 VVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 177
>gi|83816370|ref|YP_445441.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber DSM
13855]
gi|83757764|gb|ABC45877.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber DSM
13855]
Length = 875
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
+L E + QDEAI +S+ I + R G +D P + I F F GP GK ++A L
Sbjct: 523 SLKEHVVGQDEAIEKLSKAIRRTRAGLKD-----PEKPIGSFIFLGPTGVGKTELAKVLT 577
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ +E+ I D+ KF + G + G + ++ +KP SV
Sbjct: 578 EYLFDSQESLIRIDMS------EYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSV 631
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V L+ ++KA V N L + + G L D GREV N I + S+
Sbjct: 632 VLLDEIEKAHPDVSNILLQVLDDGILTDGMGREVDFRNTILIMTSNI 678
>gi|418291696|ref|ZP_12903665.1| ATPase AAA-2 domain-containing protein [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379063148|gb|EHY75891.1| ATPase AAA-2 domain-containing protein [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 949
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 611 LHERLVGQDEAVRAVADAVRLSRAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAES 666
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 667 IYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 713
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 714 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 771
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K + +L P +NR
Sbjct: 772 RRLKARGAAGEEYEKTKGEVMDVLRGHFRPEFLNR 806
>gi|336113490|ref|YP_004568257.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
gi|335366920|gb|AEH52871.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
Length = 860
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++S + + R G +D P R I F F GP GK ++A ALA+
Sbjct: 568 LHERVIGQDEAVRLVSDAVLRARAGMKD-----PNRPIGSFIFLGPTGVGKTELAKALAQ 622
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ G+ + I D+ KF + G + G + + +KP SV+
Sbjct: 623 HLFDGENHMIRIDMS------EYMEKFAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVI 676
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G++ DS GR V N I + S+
Sbjct: 677 LLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFKNTIVIMTSNI 722
>gi|302557367|ref|ZP_07309709.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302474985|gb|EFL38078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 834
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ V+S + + R G +SP R I F F GP GK ++A ALAE
Sbjct: 534 LHQRVVGQDEAVRVVSDAVMRSRAGL-----SSPDRPIGSFLFLGPTGVGKTELARALAE 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +E + D+ E + + G + G A + + + P S++
Sbjct: 589 ALFGSEERMVRLDMSEYQ-ERHTVSRLV-----GAPPGYVGHEEAGQLTEVVRRHPYSLL 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 643 LLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 692
>gi|193213633|ref|YP_001999586.1| AAA ATPase-2 domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193087110|gb|ACF12386.1| ATPase AAA-2 domain protein [Chlorobaculum parvum NCIB 8327]
Length = 438
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +S + + R G D +R I F F GP GK ++A LAE
Sbjct: 139 LHRRVVGQDEAVRAVSDAVKRSRAGMGDE-----KRPIGSFIFLGPTGVGKTELARTLAE 193
Query: 361 IIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + PP + GG L + V +
Sbjct: 194 YLFDDEDALIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQ--------LTEAVR----R 241
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SVV L+ ++KA V N L + + G+L DS GR V+ N I + S+ A+++
Sbjct: 242 KPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNI--GAQLIQ 299
Query: 475 SEMK--DCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
SEM+ D + SE + + +L Q+L + P +NR
Sbjct: 300 SEMERIDGEASEAVLEGLQEKLFQLLKQQVRPEFLNR 336
>gi|148655866|ref|YP_001276071.1| ATPase [Roseiflexus sp. RS-1]
gi|148567976|gb|ABQ90121.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 845
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q EAI IS+++ + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 522 LHSRVIGQHEAIVTISKSVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 576
Query: 361 IIYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E+ I D+ Q+ + +PP + GG L D V +
Sbjct: 577 FMFGSEEHLIKIDMSEFQERHTTSRLVGSPPGYVGYGEGGQ--------LTDAVR----R 624
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV + ++KA N L + ++ G L D GR V N I + S+
Sbjct: 625 KPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSN 675
>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
entomophila L48]
Length = 854
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA++ ++ + + R G D + S F F GP GK ++ ALAE
Sbjct: 566 LHERVIGQDEAVTAVANAVRRSRAGLSDPNRPSG----SFLFLGPTGVGKTELCKALAEF 621
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +E + D+ + + PP + GG Y+ + +K
Sbjct: 622 LFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 669
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA V N L + ++ G+L DS+GR V N + V S+
Sbjct: 670 PYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720
>gi|365873802|ref|ZP_09413335.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
gi|363983889|gb|EHM10096.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
Length = 873
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 304 EKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEII 362
+++ QDEA+ ++S+ + + R G +D PRR I F F GP GK ++A ALAE +
Sbjct: 576 QRVVGQDEAVRLVSEAVLRARAGIKD-----PRRPIGSFLFLGPTGVGKTELAKALAEAL 630
Query: 363 YGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
+ ++N + D+ + + PP + GG + ++ +KP
Sbjct: 631 FDSEDNMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQ------------LTEQVRRKP 678
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
SV+ + V+KA V N+L + + G++ DS+G+ V N + + S+
Sbjct: 679 YSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGKTVDFKNCVIILTSN 727
>gi|365093600|ref|ZP_09330664.1| ATPase AAA-2 domain-containing protein [Acidovorax sp. NO-1]
gi|363414287|gb|EHL21438.1| ATPase AAA-2 domain-containing protein [Acidovorax sp. NO-1]
Length = 936
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 598 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 653
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+YG + + D+ + GE + PP + VG D G L + V +
Sbjct: 654 VYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 700
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 701 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 758
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 759 RRLKARGAAGEEYEKTKAEVMDVLRGHFRPEFLNR 793
>gi|150392194|ref|YP_001322243.1| ATPase [Alkaliphilus metalliredigens QYMF]
gi|149952056|gb|ABR50584.1| ATPase AAA-2 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 812
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 268 NGSI-SNQLAQ--SSSSSCPDLNCQFDLSN-WKTLFRALTEKIDWQDEAISVISQTIAQR 323
NG + + ++AQ SS + P + Q + S L AL ++ Q+ A+ ISQ I +
Sbjct: 471 NGIVGAEEIAQIVSSWTGVPVMKLQEEESQRLLKLEEALHHRVIGQEPAVKSISQAIRRA 530
Query: 324 RTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE-- 380
R G +D P+R I F F GP GK +++ ALAE+++G ++ I D+ +
Sbjct: 531 RVGLKD-----PKRPIGSFIFLGPTGVGKTELSRALAEVMFGDEDAMIRIDMSEYMEKHT 585
Query: 381 ----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSL 436
+ +PP + GG + ++ +KP SVV + ++KA V N L
Sbjct: 586 VSRLIGSPPGYVGFNEGGQ------------LTEKVRRKPYSVVLFDEIEKAHPDVFNVL 633
Query: 437 SKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARIL 473
+ + G+L D+ GR ++ N + + S+ ++ RIL
Sbjct: 634 LQILDDGRLTDAQGRMINFKNTVIIMTSNVGAHTIKKQRIL 674
>gi|296271367|ref|YP_003653999.1| ATPase AAA-2 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094154|gb|ADG90106.1| ATPase AAA-2 domain protein [Thermobispora bispora DSM 43833]
Length = 834
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+AI +S+ I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQDDAIKALSRAIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIMLDMS-EYMEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 619 LFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDL----NCQFDLSNWK---------- 296
+L +R EL +A ++ S A++ S L + Q +S+W
Sbjct: 1023 ELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSD 1082
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L +++ QDEA+ IS++I + R G ++ P R I F F GP
Sbjct: 1083 ESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKN-----PNRPIASFIFAGPTGV 1137
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 1138 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 1191
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 1192 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 1247
>gi|297171252|gb|ADI22259.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_36I24]
gi|297171364|gb|ADI22368.1| hypothetical protein [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 827
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
+ +++ QD+AI+ I+++I + R G D P R I F F+GP GK ++A ALAE
Sbjct: 520 IHKRVIGQDDAITAIAKSIRRSRAGMRD-----PNRPIGSFIFSGPTGVGKTELARALAE 574
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ ++ I D+ KF + G + G + + + ++P SVV
Sbjct: 575 FLFADRDALIRVDMS------EYMEKFSISRLIGAPPGYVGYEDSGTLTKAVRRRPYSVV 628
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G L D+YGR + N + + S+
Sbjct: 629 LLDEIEKAHPDVFNLLLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 674
>gi|418046563|ref|ZP_12684651.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
gi|353192233|gb|EHB57737.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
Length = 845
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 514 LHKRIIGQEDAVRAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|449016715|dbj|BAM80117.1| heat shock protein ClpB [Cyanidioschyzon merolae strain 10D]
Length = 948
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIA 355
+L R L++++ Q +A+ +S+ I + R G D PRR I F F GP GK ++A
Sbjct: 639 SLERDLSKRVVGQRDAVRAVSEAIQRSRAGLAD-----PRRPIASFMFLGPTGVGKTELA 693
Query: 356 IALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
+LAE ++ ++ I D+ KF + G + G A + + ++
Sbjct: 694 KSLAERLFDSEDALIRIDMS------EYMEKFSVSRLIGAPPGYVGYEEAGQLTEAVRRR 747
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ ++KA V N L + + G+L DS GR V+ SN I + S+
Sbjct: 748 PYSVVLLDEIEKAHPDVFNVLLQVLDDGRLTDSQGRTVNFSNCIVIMTSNV 798
>gi|423314674|ref|ZP_17292607.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
gi|392682003|gb|EIY75358.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
Length = 838
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIIIMTSNI 688
>gi|288818844|ref|YP_003433192.1| chaperone protein [Hydrogenobacter thermophilus TK-6]
gi|384129594|ref|YP_005512207.1| ATPase [Hydrogenobacter thermophilus TK-6]
gi|288788244|dbj|BAI69991.1| chaperone protein [Hydrogenobacter thermophilus TK-6]
gi|308752431|gb|ADO45914.1| ATPase AAA-2 domain protein [Hydrogenobacter thermophilus TK-6]
Length = 984
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+ A+ +++ I + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 685 LHRRVIDQEHAVKAVAEAIRRARAGLKD-----PKRPIATFLFLGPTGVGKTELSKALAE 739
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G +E I D+ E + PP + VG + G L + V +
Sbjct: 740 LLFGDEEALIRLDMSEFKEEHSVAKLIGAPPGY----VGYEE----GGKLTEAVR----R 787
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V + + G+L DS+GR V N + + S+ +
Sbjct: 788 KPYSVILLDEIEKAHPRVFDLFLQVFDDGRLTDSHGRTVDFRNTVIIMTSNIGSQYLLGI 847
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
S D +F + + RAK+++ + L P +NR
Sbjct: 848 SVDGDEEFLQSEFERAKTKVLEELKYFFRPEFLNR 882
>gi|294507325|ref|YP_003571383.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber M8]
gi|294343653|emb|CBH24431.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber M8]
Length = 875
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
+L E + QDEAI +S+ I + R G +D P + I F F GP GK ++A L
Sbjct: 523 SLKEHVVGQDEAIEKLSKAIRRTRAGLKD-----PEKPIGSFIFLGPTGVGKTELAKVLT 577
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ +E+ I D+ KF + G + G + ++ +KP SV
Sbjct: 578 EYLFDSQESLIRIDMS------EYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSV 631
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
V L+ ++KA V N L + + G L D GREV N I + S+
Sbjct: 632 VLLDEIEKAHPDVSNILLQVLDDGILTDGMGREVDFRNTILIMTSNI 678
>gi|334335989|ref|YP_004541141.1| ATPase AAA-2 domain-containing protein [Isoptericola variabilis
225]
gi|334106357|gb|AEG43247.1| ATPase AAA-2 domain protein [Isoptericola variabilis 225]
Length = 855
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQEQAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRRPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + N+L + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNTLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EA+ +S+ + + R G +D P+R F F GP GK ++A ALAE
Sbjct: 507 LHSRVIGQEEAVKAVSKAVRRSRAGLKD-----PKRPTGSFIFLGPTGVGKTELARALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ I D+ + + +PP + GG + ++ +
Sbjct: 562 SIFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRR 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + ++ G+L DS GR V N I + S+
Sbjct: 610 KPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSN 660
>gi|26990034|ref|NP_745459.1| chaperone-associated ATPase [Pseudomonas putida KT2440]
gi|24984957|gb|AAN68923.1|AE016523_12 chaperone-associated ATPase, putative [Pseudomonas putida KT2440]
Length = 940
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F G GK ++A ALAE
Sbjct: 628 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKP--VATFLFLGSTGVGKTELAKALAET 683
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE ++ PP + VG D G L + V +
Sbjct: 684 IYGDESALLRIDMS-EYGERHSVARLVGAPPGY----VGYDE----GGQLTEKVR----R 730
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 731 KPYSVLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 788
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K + ++L P +NR
Sbjct: 789 RRLKAPGAAGEEYEKTKVEVMEVLRGHFRPEFLNR 823
>gi|227891885|ref|ZP_04009690.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactobacillus
salivarius ATCC 11741]
gi|227866348|gb|EEJ73769.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactobacillus
salivarius ATCC 11741]
Length = 832
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ QDEA+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 518 LEKILHNRVIGQDEAVKAVSKAIRRARSGLKD-----PTRPIGSFMFLGPTGVGKTELAK 572
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +++ I D+ + + +PP + VG D G L + V
Sbjct: 573 ALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGY----VGYDE----GGQLTEKVR- 623
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV L+ V+KA + N L + + G L DS GR+V N I + S+
Sbjct: 624 ---NNPYSVVLLDEVEKAHNDIFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 676
>gi|332710153|ref|ZP_08430106.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332351111|gb|EGJ30698.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 795
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
+I QDEA++ +S+ I + R G +D P R I F F+GP GK ++A +LA ++
Sbjct: 481 RIIGQDEAVTAVSRAIRRARVGLKD-----PNRPIASFIFSGPTGVGKTELAKSLASYLF 535
Query: 364 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + +PP F VG D G L + V ++P
Sbjct: 536 GSEDKMIRLDMSEYMERHTVSKLIGSPPGF----VGYDE----GGQLTEAVR----RQPY 583
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM 477
SVV + ++KA V N L + + G+L D+ GR V N I + S+ ++++
Sbjct: 584 SVVLFDEIEKAHPDVFNVLLQLLDDGRLTDARGRTVDFKNTILIMTSNI--GSKVIEKGG 641
Query: 478 KDCKFSEEKIYRAKSRLTQI 497
F K Y +SR QI
Sbjct: 642 SVFGFESSKTYE-ESRYNQI 660
>gi|424799446|ref|ZP_18224988.1| ClpB protein [Cronobacter sakazakii 696]
gi|423235167|emb|CCK06858.1| ClpB protein [Cronobacter sakazakii 696]
Length = 694
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 356
+L + L ++ QD A+ ISQ + +TG +G F TGP GK + A+
Sbjct: 380 SLEQRLAARVVGQDAALEAISQRLRASKTGLASENGPQG----VFLLTGPSGTGKTETAL 435
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLK 414
ALA+ +YGG+++ I +L E P H V + G + G + + K
Sbjct: 436 ALADTLYGGEKSLITINLS----EYQEP----HTVSQLKGSPPGYVGYGQGGILTEAVRK 487
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARI-L 473
+P SVV L+ V+KA V N + G + D GRE+ N + + S+ D + L
Sbjct: 488 RPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGSDHIMQL 547
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
E D SE ++ + + +PAL+ R
Sbjct: 548 LDEKPDA--SETDLHELLRPILRDHFQPALLAR 578
>gi|414073876|ref|YP_006999093.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris UC509.9]
gi|413973796|gb|AFW91260.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus lactis
subsp. cremoris UC509.9]
Length = 816
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 254 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 369 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|405982742|ref|ZP_11041053.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
gi|404389451|gb|EJZ84527.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
Length = 856
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 256 SQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISV 315
S+E S I++ ++ S+ +L + + + L E+I Q+EA++
Sbjct: 467 SEEADRATSEVTEAEIADVVSMSTGVPVSNL-TEAETEKLLRMEGVLHERIIGQEEAVTA 525
Query: 316 ISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADL 374
+S+ I + R+G +D P+R F F GP GK +++ ALAE ++ +E I D+
Sbjct: 526 LSKAIRRSRSGLKD-----PKRPAGSFIFLGPSGVGKTELSKALAEFLFNSEEALISFDM 580
Query: 375 CPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKA 428
+ + +PP + VG D G L V ++P SVV + ++KA
Sbjct: 581 SEYMEKHSVSRLVGSPPGY----VGFDE----GGQLTKAVR----QRPYSVVLFDEIEKA 628
Query: 429 DVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
V N L + ++ G+L DS GR V N + + S+
Sbjct: 629 HPDVFNILLQILEEGRLTDSQGRSVDFRNTVIIMTSN 665
>gi|167748025|ref|ZP_02420152.1| hypothetical protein ANACAC_02763 [Anaerostipes caccae DSM 14662]
gi|167652543|gb|EDR96672.1| ATPase family associated with various cellular activities (AAA)
[Anaerostipes caccae DSM 14662]
Length = 820
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q ++ + L + L +++ QD+A+ +++ I + R G +D P+R I F F GP
Sbjct: 501 QGEMERLRNLEKILHKQVIGQDKAVEAVARAIKRSRVGLKD-----PKRPIGSFLFLGPT 555
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 401
GK +++ +LA+ ++G +E+ I D+ + + +PP + GG
Sbjct: 556 GVGKTELSKSLAKAMFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQ------ 609
Query: 402 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 461
++ ++ + P SV+ L+ ++KA V N L + + G + DS GR+V N + +
Sbjct: 610 ------LSEQVRRHPYSVILLDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVLI 663
Query: 462 TASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIE-------PALVNR 506
S+ I P ++ + S+++ + ++TQ ++E P +NR
Sbjct: 664 MTSNAGASRIISPKQLGFVRTSDKE--KNHEKMTQGVMEEVRQIFKPEFLNR 713
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ Q EA++ +SQ I + R G +D + R F F GP GK ++A ALAE
Sbjct: 512 LHKRVIGQSEAVTALSQAIRRTRAGLKDPN----RPGGSFIFAGPTGVGKTELAKALAEF 567
Query: 362 IYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G ++ I D+ Q+ PP + VG D G L + V +K
Sbjct: 568 LFGDEDALITLDMSEFQEKHTVSRLFGAPPGY----VGYDE----GGQLTEKVR----RK 615
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SVV + V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 616 PFSVVLFDEVEKAHQDLFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|116511437|ref|YP_808653.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactococcus lactis subsp. cremoris SK11]
gi|116107091|gb|ABJ72231.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactococcus lactis subsp. cremoris SK11]
Length = 816
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 254 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 369 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|432340195|ref|ZP_19589660.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430774778|gb|ELB90352.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 301
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 304 EKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEII 362
E++ QDEA+ +++ + + R+G D PRR I F F GP GK ++A LA +
Sbjct: 2 ERVVGQDEAVQLVADAVIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLASAL 56
Query: 363 YGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
+ ++N + D+ + PP + VG D G L + V +KP
Sbjct: 57 FDSEDNMVRLDMSEYQERHTVSRLIGAPPGY----VGYDE----GGQLTEAVR----RKP 104
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + ++KA V N+L + + G++ DS GR+V N + + S+
Sbjct: 105 YSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNI 154
>gi|392971609|ref|ZP_10337003.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|403047073|ref|ZP_10902542.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
gi|392510496|emb|CCI60289.1| chaperone protein ClpB [Staphylococcus equorum subsp. equorum Mu2]
gi|402763769|gb|EJX17862.1| ATPase subunit of an ATP-dependent protease [Staphylococcus sp.
OJ82]
Length = 869
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ +++ + + R G +D P R I F F GP GK ++A +LA
Sbjct: 570 LHERVVGQDKAVDLVADAVVRARAGIKD-----PNRPIGSFLFLGPTGVGKTELAKSLAS 624
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +++ I D+ + + PP + VG D G L + V +
Sbjct: 625 TLFDSEKHMIRIDMSEYMEKHSVSRLIGAPPGY----VGHDE----GGQLTEAVR----R 672
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
P SV+ L+ ++KA V N L + ++ G+L DS GREV N I + S+ +++L
Sbjct: 673 NPYSVILLDEIEKAHSDVFNVLLQILEEGRLTDSKGREVDFKNTIIIMTSNI--GSQVLL 730
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+KD + +A +P ++NR
Sbjct: 731 ENVKDAGVITDATEKAVMNSLNQYFKPEIINR 762
>gi|395228435|ref|ZP_10406758.1| ClpV1 family type VI secretion ATPase [Citrobacter sp. A1]
gi|424731944|ref|ZP_18160525.1| ClpV1 family type vi secretion atpase [Citrobacter sp. L17]
gi|394718084|gb|EJF23728.1| ClpV1 family type VI secretion ATPase [Citrobacter sp. A1]
gi|422893572|gb|EKU33419.1| ClpV1 family type vi secretion atpase [Citrobacter sp. L17]
Length = 874
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 356
TL + +++ QD A++ I+Q + +TG +G F TGP GK + A+
Sbjct: 569 TLETQMGKRVVGQDYALNAIAQRLRASKTGLTPENGPQG----VFLLTGPSGTGKTETAL 624
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLK 414
ALA+I++GG+++ I +L E P H V + G + G + + K
Sbjct: 625 ALADILFGGEKSMITINLS----EYQEP----HTVSQLKGSPPGYVGYGQGGILTEAVRK 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ V+KA V N + G + D GRE+ N + + S+ DA +
Sbjct: 677 RPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGGDAVM-- 734
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL-------IEPALVNR 506
+ EE+ A+ L ++L +PAL+ R
Sbjct: 735 ------QLLEEQPEAAEPDLHELLRPLLRDHFQPALLAR 767
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q EA+ +SQ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 506 LHSRVIGQSEAVKAVSQAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + VG D G L + V +
Sbjct: 561 SMFGDENAIIRIDMSEYMEKHSTSRLVGAPPGY----VGYDE----GGQLTEKVR----R 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+ D
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGAD 663
>gi|422845089|ref|ZP_16891799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|325684709|gb|EGD26863.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 819
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 288 CQFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 343
Q S K L R L E++ QD+A+ ++ I + R+G +D + R I F F
Sbjct: 493 TQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLF 547
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGK 402
GP GK ++A A+AE ++G ++N I D+ D E ++ + G + + G
Sbjct: 548 LGPTGVGKTELAKAVAEAVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGY 600
Query: 403 TLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT 462
++ ++ + P SVV + V+KA+ + N L + + G + DS GR+V N I +
Sbjct: 601 EEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIM 660
Query: 463 AS-----SFVEDARI--LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSAS 515
S S D+ + S+ K EK+ RA T+ P +NR + +
Sbjct: 661 TSNLGSRSLEADSHVGFSASQEDQGKLIAEKVTRA----TKDFFRPEFLNRIDEKIVFKP 716
Query: 516 ETSEGMSHQKLLNKRKLIGR 535
++ + L RKL+ R
Sbjct: 717 LEAKQLREIVTLLTRKLVKR 736
>gi|265753580|ref|ZP_06088935.1| ATP-dependent Clp protease [Bacteroides sp. 3_1_33FAA]
gi|263235294|gb|EEZ20818.1| ATP-dependent Clp protease [Bacteroides sp. 3_1_33FAA]
Length = 838
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|296120872|ref|YP_003628650.1| ATPase AAA [Planctomyces limnophilus DSM 3776]
gi|296013212|gb|ADG66451.1| ATPase AAA-2 domain protein [Planctomyces limnophilus DSM 3776]
Length = 852
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI +++ + + R+G +D P+R I F F GP GK A LAE
Sbjct: 527 LHKRVVSQEEAIKQVAKAVRRSRSGLKD-----PKRPIGVFLFAGPTGVGKTLTAKTLAE 581
Query: 361 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + N PP + GG + ++ +
Sbjct: 582 FMFGEQDALVQIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQ------------LTEKIRR 629
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+P +VV L+ ++KA V N L + ++ G L DS+GR+V N IF+ ++
Sbjct: 630 RPYAVVLLDEIEKAHPDVFNMLLQIMEEGHLTDSFGRKVDFKNTIFIMTTN 680
>gi|237709929|ref|ZP_04540410.1| ATP-dependent Clp protease [Bacteroides sp. 9_1_42FAA]
gi|423238391|ref|ZP_17219507.1| hypothetical protein HMPREF1065_00130 [Bacteroides dorei
CL03T12C01]
gi|229456022|gb|EEO61743.1| ATP-dependent Clp protease [Bacteroides sp. 9_1_42FAA]
gi|392648074|gb|EIY41764.1| hypothetical protein HMPREF1065_00130 [Bacteroides dorei
CL03T12C01]
Length = 838
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L +++ QDEA+ +++ I + R G +D P+R I F F GP GK ++
Sbjct: 509 LEEVLHKRVVGQDEAVRAVARAIRRGRVGLKD-----PKRPIGSFIFLGPTGVGKTELCR 563
Query: 357 ALAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + N +PP + GG +
Sbjct: 564 ALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQ------------LTE 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++P SVV + ++KA V N L + + G+L DS GR VS N + + S+
Sbjct: 612 KVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|301500946|ref|YP_003795411.1| Clp protease ATP binding subunit [Alveolata sp. CCMP3155]
gi|300069492|gb|ADJ66599.1| Clp protease ATP binding subunit (chloroplast) [Chromerida sp.
RM11]
Length = 853
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 356
TL +L +++ Q+ A+S+++ + + R G ++ R F F GP GK ++A
Sbjct: 540 TLESSLQKRVIGQNRAVSIVADAVRRARLGFQN----IGRPLASFFFAGPTGVGKTELAK 595
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
AL+E ++G N + D+ + +PP + GG L + V
Sbjct: 596 ALSESLFGSDANLVRFDMSEFMEKHSTSRLIGSPPGYVGYGEGGQ--------LTEAVK- 646
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
K+P SVV + ++KA V N + + + G+L DS G++V +N I + S+
Sbjct: 647 ---KQPYSVVLFDEIEKAHEDVSNVMLQILDDGRLTDSTGQKVDFTNTILIFTSNLG--- 700
Query: 471 RILPSEMKDCKFSEEKIYRAKSRLTQILIE----PALVNR 506
P ++++ EEK YR S Q +E P +NR
Sbjct: 701 --YPKDVQEESLHEEKTYRYISGRVQAALEKYFRPEFINR 738
>gi|348173006|ref|ZP_08879900.1| putative ATP-dependent Clp protease [Saccharopolyspora spinosa NRRL
18395]
Length = 850
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +SQ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQNDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 565 FLFGDDDALVQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 619 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 664
>gi|317472493|ref|ZP_07931814.1| ATPase [Anaerostipes sp. 3_2_56FAA]
gi|316900007|gb|EFV22000.1| ATPase [Anaerostipes sp. 3_2_56FAA]
Length = 820
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 289 QFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPD 347
Q ++ + L + L +++ QD+A+ +++ I + R G +D P+R I F F GP
Sbjct: 501 QGEMERLRNLEKILHKQVIGQDKAVEAVARAIKRSRVGLKD-----PKRPIGSFLFLGPT 555
Query: 348 LCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRG 401
GK +++ +LA+ ++G +E+ I D+ + + +PP + GG
Sbjct: 556 GVGKTELSKSLAKAMFGREEDLIRVDMSEYMEKHSVSKIIGSPPGYVGFGEGGQ------ 609
Query: 402 KTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFV 461
++ ++ + P SV+ L+ ++KA V N L + + G + DS GR+V N + +
Sbjct: 610 ------LSEQVRRHPYSVILLDEIEKAHPDVFNILLQVLDDGHITDSNGRKVDFKNTVLI 663
Query: 462 TASSFVEDARILPSEMKDCKFSEEKIYRAKSRLTQILIE-------PALVNR 506
S+ I P ++ + S+++ + ++TQ ++E P +NR
Sbjct: 664 MTSNAGASRIISPKQLGFVRTSDKE--KNHEKMTQGVMEEVRQIFKPEFLNR 713
>gi|420264399|ref|ZP_14767030.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
gi|394768372|gb|EJF48300.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
Length = 826
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ + D+ + +PP + VG D G L + +
Sbjct: 567 ALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 617
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 618 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 670
>gi|374984658|ref|YP_004960153.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
gi|297155310|gb|ADI05022.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
Length = 874
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ V++ I + R+G D PRR I F F GP GK ++A LA
Sbjct: 574 LRERVIGQDEAVKVVADAIIRARSGIRD-----PRRPIGSFIFLGPTGVGKTELAKTLAA 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + GG + + +
Sbjct: 629 ALFDTEDNMVRLDMSEYQERHTVSRLLGAPPGYVGYEEGGQ------------LTEAVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N I + S+
Sbjct: 677 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRVVDFRNTILIMTSNI 728
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHH--GASPRRDIWFNFTGPDLCGKRKIAIALA 359
L +++ Q+EA+ +SQ I + R G +D + G S F F GP GK ++A ALA
Sbjct: 511 LHKRVIGQNEAVVALSQAIRRTRAGLKDPNRPGGS------FIFAGPTGVGKTELAKALA 564
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E ++G + I D+ + PP + VG D G L + V
Sbjct: 565 EFLFGDESALITLDMSEYSEKHAVSRLFGAPPGY----VGYDE----GGQLTEKVR---- 612
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV + V+KA + NSL + ++ G+L DS GR V N I + ++
Sbjct: 613 RKPFSVVLFDEVEKAHPDLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 665
>gi|260433267|ref|ZP_05787238.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417095|gb|EEX10354.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 940
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ Q+EAI+ ++ + R G + G + F F GP GK ++A LAE+
Sbjct: 609 LHERVIGQEEAIAAVADAVRLARAGLREGSGPTA----TFLFLGPTGVGKTELAKTLAEV 664
Query: 362 IYGGKENFICADLCPQDGE-------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+G ++ + D+ + GE + PP + VG D G L + V +
Sbjct: 665 IFGDEDALLRIDMS-EYGERHAVARLVGAPPGY----VGYDE----GGQLTEKVR----R 711
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 712 RPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 769
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ E + K+ L ++L P +NR
Sbjct: 770 KNLTKRGTKEFDEAKQKADLMEVLRSHFRPEFINR 804
>gi|257062871|ref|YP_003142543.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
gi|256790524|gb|ACV21194.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
Length = 891
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q +L+ L L E++ QDEA+S ++ I + R G D P R I F F GP
Sbjct: 557 MQGELAKLVDLEAKLHERVVGQDEAVSAVAGAIRRNRAGLSD-----PDRPIGSFLFLGP 611
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + + D+ KF Q + G + G
Sbjct: 612 TGVGKTELAKALAEYLFDTERAMVRIDMS------EYMEKFSVQRLIGAPPGYVGYDEGG 665
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++P +V+ L+ ++KA V N L + + G+L D GR V+ NAI + S+
Sbjct: 666 QLTEAVRRRPYTVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVNFKNAIIIMTSNV 725
>gi|212693187|ref|ZP_03301315.1| hypothetical protein BACDOR_02697 [Bacteroides dorei DSM 17855]
gi|212664292|gb|EEB24864.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides dorei DSM 17855]
Length = 838
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|89893184|ref|YP_516671.1| hypothetical protein DSY0438 [Desulfitobacterium hafniense Y51]
gi|219666457|ref|YP_002456892.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073164|ref|ZP_17061907.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
gi|89332632|dbj|BAE82227.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536717|gb|ACL18456.1| ATPase AAA-2 domain protein [Desulfitobacterium hafniense DCB-2]
gi|361855994|gb|EHL07928.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
Length = 826
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++A+ +S+ + + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 514 LHQRVVGQEDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAE 568
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + +G D G L + + +
Sbjct: 569 ALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGY----IGHDE----GGQLTEAIR----R 616
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + ++ G+L D+ GR V NA+ + S+
Sbjct: 617 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
gi|333488493|gb|AEF37885.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
Length = 821
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q +A++ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 493 LHKRIIGQKDAVNAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNCVLIFTSNL 647
>gi|257868131|ref|ZP_05647784.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257874594|ref|ZP_05654247.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257877740|ref|ZP_05657393.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
gi|257802245|gb|EEV31117.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257808758|gb|EEV37580.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257811906|gb|EEV40726.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
Length = 829
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 515 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 569
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ + D+ + +PP + VG D G L + +
Sbjct: 570 ALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 620
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 621 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 673
>gi|302521030|ref|ZP_07273372.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|318061546|ref|ZP_07980267.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actG]
gi|318076619|ref|ZP_07983951.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actF]
gi|333025279|ref|ZP_08453343.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
gi|302429925|gb|EFL01741.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|332745131|gb|EGJ75572.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
Length = 841
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
+ E +EL AT G +L + SS + + L +++ Q++
Sbjct: 473 VAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDE------------LHKRVIGQED 520
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
A+ +SQ I + R G +D P+R F F GP GK ++A LAE ++G ++ I
Sbjct: 521 AVKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELAKTLAEFLFGDEDALI 575
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ + E + + + G + G + ++ +KP SVV + V+KA
Sbjct: 576 SLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHP 629
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 630 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 665
>gi|429114248|ref|ZP_19175166.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
sakazakii 701]
gi|426317377|emb|CCK01279.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
sakazakii 701]
Length = 260
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L E++ QDEA+ ++ + R G + G+ P F F GP GK ++A ALAE
Sbjct: 31 LHERLVGQDEAVRAVADAVRLSRAGLRE--GSKPV--ATFLFLGPTGVGKTELAKALAES 86
Query: 362 IYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
IYG + + D+ + GE + PP + VG D G L + V +
Sbjct: 87 IYGDEHALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR----R 133
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 134 KPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--IIQ 191
Query: 475 SEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K+ + +L P +NR
Sbjct: 192 RRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNR 226
>gi|291438069|ref|ZP_06577459.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291340964|gb|EFE67920.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
Length = 841
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDDAVKALSKAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|345515457|ref|ZP_08794959.1| ATP-dependent Clp protease [Bacteroides dorei 5_1_36/D4]
gi|229436091|gb|EEO46168.1| ATP-dependent Clp protease [Bacteroides dorei 5_1_36/D4]
Length = 838
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|451336793|ref|ZP_21907347.1| ClpB protein [Amycolatopsis azurea DSM 43854]
gi|449420598|gb|EMD26069.1| ClpB protein [Amycolatopsis azurea DSM 43854]
Length = 876
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G D PR+ I F F GP GK ++A LA
Sbjct: 574 LHERVIGQDEAVRLVADAIIRARSGIRD-----PRKPIGSFIFLGPTGVGKTELAKTLAS 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ + PP + VG D G L + V +
Sbjct: 629 ALFDSEENMVRLDMSEYQERHTVSRLLGAPPGY----VGYDE----GGQLTEAVR----R 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 677 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRTVDFRNTVIIMTSNI 728
>gi|429194529|ref|ZP_19186617.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
gi|428669694|gb|EKX68629.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
Length = 841
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDDAVKALSKAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|423231490|ref|ZP_17217893.1| hypothetical protein HMPREF1063_03713 [Bacteroides dorei
CL02T00C15]
gi|423246077|ref|ZP_17227150.1| hypothetical protein HMPREF1064_03356 [Bacteroides dorei
CL02T12C06]
gi|392627120|gb|EIY21159.1| hypothetical protein HMPREF1063_03713 [Bacteroides dorei
CL02T00C15]
gi|392637062|gb|EIY30938.1| hypothetical protein HMPREF1064_03356 [Bacteroides dorei
CL02T12C06]
Length = 838
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|420237566|ref|ZP_14742031.1| Clp protease [Parascardovia denticolens IPLA 20019]
gi|391879188|gb|EIT87700.1| Clp protease [Parascardovia denticolens IPLA 20019]
Length = 862
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
+L +++ QDEA+S ++++I + R G +D PRR F F GP GK ++A ALA
Sbjct: 514 SLHKRVIGQDEAVSALARSIRRARVGLKD-----PRRPSGSFIFAGPTGVGKTELAKALA 568
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ ++ I D+ + GE + + + G + G + ++ +KP SV
Sbjct: 569 EYLFDDEDALIRVDMS-EFGEKYSTSRLF-----GAPPGYVGYEEGGELTEKVRRKPFSV 622
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 623 ILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNL 669
>gi|319640979|ref|ZP_07995687.1| hypothetical protein HMPREF9011_01284 [Bacteroides sp. 3_1_40A]
gi|345519372|ref|ZP_08798795.1| ATP-dependent Clp protease [Bacteroides sp. 4_3_47FAA]
gi|254834806|gb|EET15115.1| ATP-dependent Clp protease [Bacteroides sp. 4_3_47FAA]
gi|317387424|gb|EFV68295.1| hypothetical protein HMPREF9011_01284 [Bacteroides sp. 3_1_40A]
Length = 838
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|297582418|ref|YP_003698198.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297140875|gb|ADH97632.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 815
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA++ +S+ + + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 512 LHGRVIGQDEAVTAVSKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 566
Query: 361 IIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + N +PP + VG D G L + V +
Sbjct: 567 TLFGDEDAIIRIDMSEYMEKHNTSRLVGSPPGY----VGHDE----GGQLTEKVR----R 614
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G L DS GR V N + S+
Sbjct: 615 KPYSVILLDEIEKAHPEVFNILLQVLEDGFLTDSKGRRVDFRNTAVIMTSNV 666
>gi|435852942|ref|YP_007314261.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
gi|433669353|gb|AGB40168.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
Length = 811
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 274 QLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGA 333
+LAQ S +L + L E++ QDEA+ ++Q I + R G +D
Sbjct: 493 KLAQEESERLLNLEAE------------LHERVVGQDEAVESVAQAIRRARAGLKD---- 536
Query: 334 SPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPK 386
P+R I F F GP GK ++A LAE ++ ++ I D+ + + PP
Sbjct: 537 -PKRPIGSFIFLGPTGVGKTELAKTLAESMFDDEDAMIRVDMSEYMEKHAVSRLVGAPPG 595
Query: 387 FYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLP 446
+ GG + E+ ++P SV+ L+ ++KA V N L + ++ G+L
Sbjct: 596 YVGHDEGGQ------------LTEEVRRRPYSVILLDEIEKAHPEVFNVLLQLLEDGQLT 643
Query: 447 DSYGREVSVSNAIFVTASSFVED 469
D+ GR V N + + S+ D
Sbjct: 644 DAQGRTVDFKNTVVIMTSNVGAD 666
>gi|325567772|ref|ZP_08144383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
gi|325158545|gb|EGC70692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
Length = 829
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ ++++I + R+G +D P R I F F GP GK ++A
Sbjct: 515 LEKILHQRVVGQEEAVKAVARSIRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 569
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ + D+ + +PP + VG D G L + +
Sbjct: 570 ALAEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 620
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 621 ---SKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 673
>gi|150005806|ref|YP_001300550.1| negative regulator of genetic competence [Bacteroides vulgatus ATCC
8482]
gi|294777725|ref|ZP_06743174.1| negative regulator of genetic competence ClpC/MecB [Bacteroides
vulgatus PC510]
gi|149934230|gb|ABR40928.1| negative regulator of genetic competence [Bacteroides vulgatus ATCC
8482]
gi|294448425|gb|EFG16976.1| negative regulator of genetic competence ClpC/MecB [Bacteroides
vulgatus PC510]
Length = 838
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L K+ QD+AI+ + + I + R G +D P + I F F GP GK +A LA+
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVGLKD-----PNKPIGTFMFLGPTGVGKTHLAKELAK 588
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
+++G + I D+ KF + G + G + ++ +KP S+V
Sbjct: 589 LMFGSADALIRIDMSEY------MEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSIV 642
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DSYGR V N I + S+
Sbjct: 643 LLDEIEKAHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|402829159|ref|ZP_10878040.1| Clp amino terminal domain protein [Slackia sp. CM382]
gi|402284913|gb|EJU33406.1| Clp amino terminal domain protein [Slackia sp. CM382]
Length = 865
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 27/179 (15%)
Query: 296 KTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
K L R L E+I Q+EA++ +S+ I + R+G +D PRR F F GP GK
Sbjct: 511 KKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKD-----PRRPAGSFIFLGPSGVGK 565
Query: 352 RKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLA 405
+++ ALAE ++ +E I D+ + + +PP + VG D G L
Sbjct: 566 TELSKALAEFLFSSEEALISFDMSEYMEKHTVSRLIGSPPGY----VGFDE----GGQLT 617
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 464
V + P SVV + ++KA V N L + ++ G+L D+ GR V NA+ + S
Sbjct: 618 KAVR----QHPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTS 672
>gi|313123097|ref|YP_004033356.1| ATP-dependent clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279660|gb|ADQ60379.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 819
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 288 CQFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 343
Q S K L R L E++ QD+A+ ++ I + R+G +D + R I F F
Sbjct: 493 TQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLF 547
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGK 402
GP GK ++A A+AE ++G ++N I D+ D E ++ + G + + G
Sbjct: 548 LGPTGVGKTELAKAVAEAVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGY 600
Query: 403 TLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT 462
++ ++ + P SVV + V+KA+ + N L + + G + DS GR+V N I +
Sbjct: 601 EEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIM 660
Query: 463 AS-----SFVEDARI--LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSAS 515
S S D+ + S+ K EK+ RA T+ P +NR + +
Sbjct: 661 TSNLGSRSLEADSHVGFSASQEDQGKLIAEKVTRA----TKDFFRPEFLNRIDEKIVFKP 716
Query: 516 ETSEGMSHQKLLNKRKLIGR 535
++ + L RKL+ R
Sbjct: 717 LEAKQLREIVTLLTRKLVKR 736
>gi|449470390|ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
gi|449505877|ref|XP_004162592.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSC----PDLNCQFDLSNWK---------- 296
+L +R EL SA ++ A+S + +++ Q +S+W
Sbjct: 534 ELRDREMELKAKISALIDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTD 593
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L ++ QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 594 ESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 648
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 649 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 702
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 703 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 758
>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
Length = 860
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +S + + R+G +D P R I F F GP GK ++A ALAE
Sbjct: 569 LAMRVIGQDEALEAVSNAVRRARSGMQD-----PNRPIGSFIFMGPTGVGKTELAKALAE 623
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
I+ ++ + D+ + + PP + GG Y+ + +
Sbjct: 624 FIFDSEQAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGG------------YLTEAVRR 671
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N L + + G++ D +GR V N I + S+
Sbjct: 672 KPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDGHGRTVDFKNTIIIMTSNV 723
>gi|229016522|ref|ZP_04173463.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
gi|229022730|ref|ZP_04179254.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
gi|228738542|gb|EEL89014.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
gi|228744789|gb|EEL94850.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
Length = 866
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+L +D EE R +L P +NR
Sbjct: 730 HLLEGLEEDGSIKEESRERVMGQLRGHF-RPEFLNR 764
>gi|153003502|ref|YP_001377827.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152027075|gb|ABS24843.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 890
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
++ + RAL +++ Q+EA+ +S+ + + RTG +D P R I F F GP
Sbjct: 557 EMQRLLEMERALEKRVVGQEEALRAVSEAVRRARTGLKD-----PSRPIGTFLFLGPTGV 611
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK + A ALAE ++ +E I D+ E V G + G A +
Sbjct: 612 GKTETARALAEYLFNDEEAMIRFDMS----EFQERHTVSRLV--GAPPGYVGYEEAGKLT 665
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+ ++P SV+ + ++KA V N L + + G+L D+ GR VS N I V S+ D
Sbjct: 666 EAVRRRPYSVLLFDEIEKAHPDVFNVLLQLMDDGRLTDAKGRTVSFKNTIVVLTSNVGAD 725
Query: 470 A 470
A
Sbjct: 726 A 726
>gi|357401726|ref|YP_004913651.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386357788|ref|YP_006056034.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337768135|emb|CCB76848.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808296|gb|AEW96512.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 825
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL +++ QDEA++ +++ + + R G D P R + F F GP GK ++A ALA
Sbjct: 528 ALHQRVVGQDEAVTAVAEAVRRNRAGLGD-----PDRPVGSFLFLGPTGVGKTELAKALA 582
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E+++G ++ I D+ E V G + G A + + +KP SV
Sbjct: 583 ELLFGDEDRLIRFDMS----EFQERHTVSRLV--GAPPGYVGHEEAGQLTEAVRRKPYSV 636
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + V+KA V N L + + G+L D+ GR V N + + S+
Sbjct: 637 LLFDEVEKAHADVFNLLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 683
>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 815
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L E++ QDEA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 503 LEKILHERVIGQDEAVEAVAKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 557
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G + + D+ + + +PP + GG L ++V
Sbjct: 558 ALAEAMFGDENAMVRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQ--------LTEHVR- 608
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+KP +VV + ++KA V N L + ++ G+L D GR V N + + S+
Sbjct: 609 ---RKPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGRTVDFRNTVIIMTSN 660
>gi|288922630|ref|ZP_06416807.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288346022|gb|EFC80374.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 875
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+S+++ + + R+G D PRR + F F GP GK ++A L+E
Sbjct: 574 LHQRVVGQDEAVSLVADAVIRARSGIRD-----PRRPVGSFIFLGPTGVGKTELARTLSE 628
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E I D+ + +PP + GG + + +
Sbjct: 629 ALFDSEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTE------------AVRR 676
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ + ++KA V N+L + + G+L D+ GR V+ +N + + S+
Sbjct: 677 KPYSVILFDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNI 728
>gi|237784954|ref|YP_002905659.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
gi|237757866|gb|ACR17116.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
Length = 903
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 530 LHKRIIGQEDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAE 584
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ E ++ KF + G + G + ++ +KP SVV
Sbjct: 585 FLFGEDDALIQIDMS----EFHD--KFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 638
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA+ + N+L + ++ G+L D GR V N + + S+
Sbjct: 639 LFDEIEKANNEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 684
>gi|455652535|gb|EMF31161.1| Clp-family ATP-binding protease [Streptomyces gancidicus BKS 13-15]
Length = 841
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 510 LHKRVIGQDDAVKALSKAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALISLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|392529183|ref|ZP_10276320.1| class III stress response-like ATPase, AAA+ superfamily protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 830
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L ++ Q +A+S +S+ + + R+G +D P R I F F GP GK ++A
Sbjct: 512 LEKVLHSRVVGQKDAVSAVSRAMRRARSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + +PP + VG D G L + +
Sbjct: 567 ALAESMFGSEDALIRVDMSEYMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 617
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SVV L+ V+KA V N L + + G L D+ GR+V N I + S+
Sbjct: 618 ---QKPYSVVLLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFKNTILIMTSNL 670
>gi|357149201|ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 879
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL----SNWK---------- 296
+L ++ EL +A ++ S A++ S L + D+ S+W
Sbjct: 490 ELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSD 549
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L ++I QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 550 ESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 604
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 605 GKSELAKALASYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 658
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 659 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 714
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 257 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
++++G S+ G +LAQ S +L L +++ QD+A+ +
Sbjct: 479 EDIAGIVSSW-TGVPVQKLAQEESEKLLNLE------------EVLHQRVVGQDDAVKAV 525
Query: 317 SQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 375
S+ + + R G +D P+R + F F GP GK ++A ALAE ++G ++ + D+
Sbjct: 526 SRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMS 580
Query: 376 PQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
+ + PP + VG D G L + V +KP SVV L+ ++KA
Sbjct: 581 EYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR----RKPYSVVLLDEIEKAH 628
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
V N L + ++ G+L D+ GR V N + + S+
Sbjct: 629 PDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 664
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 257 QELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVI 316
++++G S+ G +LAQ S +L L +++ QD+A+ +
Sbjct: 479 EDIAGIVSSW-TGVPVQKLAQEESEKLLNLE------------EVLHQRVVGQDDAVKAV 525
Query: 317 SQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLC 375
S+ + + R G +D P+R + F F GP GK ++A ALAE ++G ++ + D+
Sbjct: 526 SRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMS 580
Query: 376 PQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKAD 429
+ + PP + VG D G L + V +KP SVV L+ ++KA
Sbjct: 581 EYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR----RKPYSVVLLDEIEKAH 628
Query: 430 VHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
V N L + ++ G+L D+ GR V N + + S+
Sbjct: 629 PDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSN 664
>gi|395243261|ref|ZP_10420248.1| ATP-dependent Clp protease [Lactobacillus hominis CRBIP 24.179]
gi|394484491|emb|CCI81256.1| ATP-dependent Clp protease [Lactobacillus hominis CRBIP 24.179]
Length = 824
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 350
L+N + + L E++ Q++AIS +S+ I + R+G +D + R I F F GP G
Sbjct: 507 LANLEAI---LHERVIGQNKAISAVSRAIRRSRSGIKDEN-----RPIGSFLFLGPTGVG 558
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 406
K ++A ALA+ ++G ++N I D+ ++ Q+ G + + G
Sbjct: 559 KTELAKALADAVFGSEKNIIRVDMS----------EYMDQIATSKLIGSAPGYVGYEEGG 608
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ + + P SV+ L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 609 QLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 24/174 (13%)
Query: 300 RALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIAL 358
+ L E++ Q+EA+ IS+ + + R G +D P+R I F F GP GK ++A A+
Sbjct: 506 KILHERVVGQEEAVISISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAV 560
Query: 359 AEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWEL 412
AE ++G ++ I D+ + + +PP + GG + ++
Sbjct: 561 AETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEDGGQ------------LTEKV 608
Query: 413 LKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SV+ L+ ++KA V N L + ++ G+L DS GR V N + S+
Sbjct: 609 RRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNV 662
>gi|296130887|ref|YP_003638137.1| ATPase AAA-2 domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296022702|gb|ADG75938.1| ATPase AAA-2 domain protein [Cellulomonas flavigena DSM 20109]
Length = 858
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+ AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQNAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR + N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVIDFKNTVIIMTTNL 664
>gi|403514305|ref|YP_006655125.1| ATP-dependent protease ATP-binding subunit ClpC [Lactobacillus
helveticus R0052]
gi|403079743|gb|AFR21321.1| ATP-dependent protease ATP-binding subunit ClpC [Lactobacillus
helveticus R0052]
Length = 826
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 350
L+N +++ L +++ QD+A+S +++ I + R+G +D RR I F F GP G
Sbjct: 511 LANLESI---LHKRVIGQDKAVSAVARAIRRSRSGIKDE-----RRPIGSFLFLGPTGVG 562
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVG----GDSVQFRGKTLAD 406
K ++A ++A ++G ++N I D+ ++ Q+ G + + G
Sbjct: 563 KTELAKSVAAAMFGSEDNLIRLDMS----------EYMDQIASSKLIGSAPGYVGYEEGG 612
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ ++ + P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 613 QLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 672
Query: 467 VEDARILPSEMKDCKFSEEKIYRAKSRLTQI------LIEPALVNR 506
+R L + K F+ +++ +AK R ++ P +NR
Sbjct: 673 --GSRTL-FDSKAVGFNADRVDQAKVRQAKVQQAIKQFFRPEFLNR 715
>gi|256397471|ref|YP_003119035.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256363697|gb|ACU77194.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 850
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 512 LHKRVIGQNQAIKGLSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELAKALAE 566
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 567 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 620
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 621 LFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|384914574|ref|ZP_10015358.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Methylacidiphilum
fumariolicum SolV]
gi|384527459|emb|CCG91226.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Methylacidiphilum
fumariolicum SolV]
Length = 868
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWK--------------- 296
LT++ QEL S +GS + + + PDL + +S W
Sbjct: 511 LTKQIQELESKISEE-DGSKHRMIQEEVT---PDLIAEI-VSRWTGIPVARLLEGEKEKL 565
Query: 297 -TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKI 354
L + L +++ QDEA++ + I + R+G +D P+R I F F GP GK ++
Sbjct: 566 LKLDQILHKRVVGQDEAVNAVVDAILRARSGLKD-----PKRPIGSFIFLGPTGVGKTEL 620
Query: 355 AIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYV 408
A +LAE ++ +EN I D+ + + PP + VG + G L + V
Sbjct: 621 ARSLAEALFDSEENMIRLDMSEYMEKHTVARLIGAPPGY----VGFEE----GGQLTEAV 672
Query: 409 AWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SV+ L+ ++KA V N + ++ G+L D +GR V N I + S+
Sbjct: 673 R----RKPYSVLLLDEIEKAHPEVFNLFLQILEDGRLTDGHGRTVDFKNTIIIMTSNI 726
>gi|302870468|ref|YP_003839105.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
gi|302573327|gb|ADL49529.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
Length = 879
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R+G +D PRR I F F GP GK ++A LA
Sbjct: 575 LHERVVGQDEAVQLVADAVIRARSGVKD-----PRRPIGSFLFLGPTGVGKTELAKTLAA 629
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + VG D G L + V +
Sbjct: 630 ALFDTEDNMVRLDMSEYQERHTVSRLVGAPPGY----VGYDE----GGQLTEAVR----R 677
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + V+KA V N+L + + G+L D+ GR V N + V S+
Sbjct: 678 KPYSVVLFDEVEKAHPDVFNTLLQLLDDGRLTDAQGRTVDFRNTVVVMTSNI 729
>gi|295837256|ref|ZP_06824189.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
gi|197699938|gb|EDY46871.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
Length = 841
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
+ E +EL AT G +L + SS + + L +++ Q++
Sbjct: 473 VAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDE------------LHKRVIGQED 520
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
A+ +SQ I + R G +D P+R F F GP GK ++A LAE ++G ++ I
Sbjct: 521 AVKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELAKTLAEFLFGDEDALI 575
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ + E + + + G + G + ++ +KP SVV + V+KA
Sbjct: 576 SLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHP 629
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 630 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 665
>gi|294787498|ref|ZP_06752751.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315226925|ref|ZP_07868713.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|294484854|gb|EFG32489.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315121057|gb|EFT84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 862
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL +++ QDEA+S ++++I + R G +D P+R F F GP GK ++A ALA
Sbjct: 514 ALHKRVIGQDEAVSALARSIRRARVGLKD-----PKRPSGSFIFAGPTGVGKTELAKALA 568
Query: 360 EIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
E ++ ++ I D+ + GE + + + G + G + ++ +KP SV
Sbjct: 569 EYLFDDEDALIRVDMS-EFGEKYSTSRLF-----GAPPGYVGYEEGGELTEKVRRKPFSV 622
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 623 ILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNL 669
>gi|390936556|ref|YP_006394115.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
gi|389890169|gb|AFL04236.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
Length = 858
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRTRVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 573 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 621 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|377811246|ref|YP_005043686.1| ATPase [Burkholderia sp. YI23]
gi|357940607|gb|AET94163.1| ATPase [Burkholderia sp. YI23]
Length = 910
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ QDEA+ +S + + RTG + + R F F GP GK ++A ALAE+
Sbjct: 591 LHKRVIGQDEAVEAVSDAVRRARTGLQGRN----RPIAVFLFLGPTGVGKTELAKALAEV 646
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++G ++ + D+ + +PP + VG D G L + V ++
Sbjct: 647 VFGDEDAMLRVDMSEYMERHAVSRLIGSPPGY----VGYDE----GGQLTERVR----RR 694
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
P SV+ L+ ++KA V N L + G+L D GR V SN + + S+ D
Sbjct: 695 PYSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGSD 748
>gi|271970316|ref|YP_003344512.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
gi|270513491|gb|ACZ91769.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
Length = 835
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+AI +S++I + R G +D PRR F F GP GK +++ ALAE
Sbjct: 510 LHKRIIGQDDAIKGLSRSIRRTRAGLKD-----PRRPGGSFIFAGPSGVGKTELSKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFGDEDALIMLDMS-EFMEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D+ GR V N + + ++
Sbjct: 619 LFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|310287202|ref|YP_003938460.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|311064064|ref|YP_003970789.1| genetic competence regulator ClpC [Bifidobacterium bifidum PRL2010]
gi|421734040|ref|ZP_16173129.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|421737399|ref|ZP_16176009.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
gi|309251138|gb|ADO52886.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|310866383|gb|ADP35752.1| ClpC Negative regulator of genetic competence [Bifidobacterium
bifidum PRL2010]
gi|407078036|gb|EKE50853.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|407295316|gb|EKF15088.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
Length = 858
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRTRVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 573 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 621 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|189218123|ref|YP_001938765.1| ATP-binding subunits of Clp protease ClpB [Methylacidiphilum
infernorum V4]
gi|189184981|gb|ACD82166.1| ATP-binding subunits of Clp protease ClpB [Methylacidiphilum
infernorum V4]
Length = 869
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ ++ I + R+G +D P+R I F F GP GK ++A +LAE
Sbjct: 572 LHKRVVGQDEAVQAVTDAILRARSGLKD-----PKRPIGSFIFLGPTGVGKTELARSLAE 626
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN I D+ + + PP + VG + G L + V +
Sbjct: 627 ALFDSEENMIRLDMSEYMEKHTVARLIGAPPGY----VGFEE----GGQLTEAVR----R 674
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N + ++ G+L D +GR V N I + S+
Sbjct: 675 KPYSVLLLDEIEKAHPEVFNLFLQILEDGRLTDGHGRTVDFRNTIIIMTSNI 726
>gi|401682711|ref|ZP_10814601.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
gi|400183951|gb|EJO18198.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
Length = 809
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 16/239 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L L +++ QDEAIS IS+ I + ++G S +R I F F GP
Sbjct: 495 TQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIR-----SSKRPIGSFMFLGP 549
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE ++ + I D+ KF + G + G
Sbjct: 550 TGVGKTELAKALAESLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 603
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +P SV+ + V+KA + N L + + G+L DS GR+V SN I + S+
Sbjct: 604 ELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIIIMTSNL 663
Query: 467 ----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEGM 521
+ D +++ +D + + + + P +NR + + S ++E M
Sbjct: 664 GATSLRDDKMVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAEDM 722
>gi|420914407|ref|ZP_15377714.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|420987968|ref|ZP_15451124.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|421034730|ref|ZP_15497751.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
gi|392125407|gb|EIU51163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|392182247|gb|EIV07898.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|392228051|gb|EIV53564.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
Length = 823
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|418418717|ref|ZP_12991902.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001890|gb|EHM23082.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
Length = 823
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|149174917|ref|ZP_01853541.1| negative regulator of genetic competence ClpC/MecB [Planctomyces
maris DSM 8797]
gi|148846254|gb|EDL60593.1| negative regulator of genetic competence ClpC/MecB [Planctomyces
maris DSM 8797]
Length = 846
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 40/234 (17%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQ------SSSSSCPDLNCQFDLSNWKTL 298
KE ++++ E+S+E+ G A V + ++ SS + LN + +L
Sbjct: 462 KESLTQEWREKSKEVDGVVDAEVVAEVVAKITGVPLTRLSSEDTVRLLNMEDELH----- 516
Query: 299 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 357
+++ QDEAI +S+ + + R+G +D P+R + F F+GP GK +A
Sbjct: 517 -----QRVISQDEAIKQVSKAVRRSRSGLKD-----PKRPMGAFLFSGPTGVGKTLLAKT 566
Query: 358 LAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWE 411
LAE ++G + I D+ + N PP + GG + +
Sbjct: 567 LAEFMFGDETALIQIDMSEYMEKHNVSRLIGAPPGYVGFEEGGQ------------LTEK 614
Query: 412 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV L+ ++KA V N L + ++ G L DS+GR+V N + + ++
Sbjct: 615 IRRRPYAVVLLDEIEKAHPDVFNMLLQIMEEGHLTDSFGRKVDFKNVVLIMTTN 668
>gi|452910065|ref|ZP_21958747.1| ATP-dependent Clp protease [Kocuria palustris PEL]
gi|452834683|gb|EME37482.1| ATP-dependent Clp protease [Kocuria palustris PEL]
Length = 884
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI +S++I + R G +D P+R F F GP GK ++A +LAE
Sbjct: 515 LHKRVVGQEEAIKALSRSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELARSLAE 569
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ E + + + G + G + ++ +KP SVV
Sbjct: 570 FLFGDEDSLITLDMSEYQ-EKHTVSRLF-----GAPPGYVGFEEGGQLTEKVRRKPFSVV 623
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 624 LFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 669
>gi|15672624|ref|NP_266798.1| ATP-dependent protease ATP-binding subunit [Lactococcus lactis
subsp. lactis Il1403]
gi|12723546|gb|AAK04740.1|AE006297_3 ATP-dependent protease ATP-binding subunit [Lactococcus lactis
subsp. lactis Il1403]
Length = 816
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 262 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 321
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 322 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 376
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 377 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 434
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 435 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|385838925|ref|YP_005876555.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
lactis subsp. cremoris A76]
gi|358750153|gb|AEU41132.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactococcus
lactis subsp. cremoris A76]
Length = 816
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 254 ERSQELSG----CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
E+ QE++ ++T+ G Q+ +S S +L + L +++ Q
Sbjct: 475 EKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQ 522
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKEN 368
+EAIS +S+ I + R+G D RR + F F GP GK ++A ALA+ ++G ++N
Sbjct: 523 EEAISAVSRAIRRARSGVAD-----SRRPMGSFIFLGPTGVGKTELAKALADSVFGSEDN 577
Query: 369 FICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYL 422
I D+ + PP + VG D G L + V KP SVV L
Sbjct: 578 MIRVDMSEFMEKHSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLL 625
Query: 423 ENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA V N + + + G + D+ GR+V N I + S+
Sbjct: 626 DEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|289572251|ref|ZP_06452478.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis K85]
gi|289536682|gb|EFD41260.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis K85]
Length = 586
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 252 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 306
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 307 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 360
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 361 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 406
>gi|183601796|ref|ZP_02963166.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683673|ref|YP_002470056.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|241190706|ref|YP_002968100.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196112|ref|YP_002969667.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|384193703|ref|YP_005579449.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195264|ref|YP_005581009.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|386866851|ref|YP_006279845.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|387820575|ref|YP_006300618.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|387822251|ref|YP_006302200.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679232|ref|ZP_17654108.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|61679297|gb|AAX52926.1| ClpC [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|183219402|gb|EDT90043.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621323|gb|ACL29480.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|240249098|gb|ACS46038.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250666|gb|ACS47605.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793695|gb|ADG33230.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|345282562|gb|AEN76416.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041343|gb|EHN17838.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|385700934|gb|AFI62882.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|386653276|gb|AFJ16406.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|386654859|gb|AFJ17988.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
Length = 850
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 278 SSSSSCPDLN-CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
S S+ P Q + ++ + L ++I QDEA+S +S++I + R G +D P+
Sbjct: 492 SQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKD-----PK 546
Query: 337 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 389
R F F GP GK ++A ALA+ ++ ++ I D+ + PP +
Sbjct: 547 RPAGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVG 606
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
GG+ + ++ +KP SVV + ++KA + N+L + + G L D
Sbjct: 607 YEEGGE------------LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQ 654
Query: 450 GREVSVSNAIFVTASSF 466
GR+V N I + ++
Sbjct: 655 GRKVDFKNTIIILTTNL 671
>gi|33860767|ref|NP_892328.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633709|emb|CAE18666.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 919
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
++EK+ Q++AI +S I + R G ++ P+R I F F GP GK ++A +LA
Sbjct: 615 ISEKVIGQEKAIKAVSSAIRRARVGMKN-----PKRPIGSFLFMGPTGVGKTELAKSLAS 669
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E + D+ + + PP + GG L + V +
Sbjct: 670 SLFDEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQ--------LTEAVR----R 717
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF-----VED 469
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+ +ED
Sbjct: 718 KPYSVILLDEIEKAHSEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKIILED 777
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
++I+ ++ ++ + ++ + + ++ + P +NR
Sbjct: 778 SKIITNQKENSELRKQTLQDSINKSLSSIFRPEFLNR 814
>gi|336321879|ref|YP_004601847.1| ATPase AAA [[Cellvibrio] gilvus ATCC 13127]
gi|336105460|gb|AEI13279.1| ATPase AAA-2 domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 860
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+ AI +SQ I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRVVGQNAAIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ ++P SVV
Sbjct: 565 FLFGDEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYDEGGQLTEKVRRRPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 619 LFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 664
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ Q+EA+ +++ I + R G +D P+R I F F GP GK ++A
Sbjct: 505 LEETLHNRVIGQEEAVEAVAKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAR 559
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++ +E I D+ + + +PP + VG D G L + V
Sbjct: 560 ALAESMFADEEAMIRIDMSEYMEKHATSRLVGSPPGY----VGYDE----GGQLTEKVRT 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ V+KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 ----KPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSN 662
>gi|414579681|ref|ZP_11436824.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|420886598|ref|ZP_15349958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|420889758|ref|ZP_15353106.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|420892602|ref|ZP_15355946.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|420899862|ref|ZP_15363193.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|420908077|ref|ZP_15371395.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|420934689|ref|ZP_15397962.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|420939997|ref|ZP_15403264.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|420945254|ref|ZP_15408507.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|420959184|ref|ZP_15422418.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|420960066|ref|ZP_15423297.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
gi|420970045|ref|ZP_15433246.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|421000598|ref|ZP_15463731.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392082361|gb|EIU08187.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|392087506|gb|EIU13328.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|392097223|gb|EIU23017.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|392105981|gb|EIU31767.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|392108483|gb|EIU34263.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|392124205|gb|EIU49966.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|392133101|gb|EIU58846.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|392156859|gb|EIU82557.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|392158462|gb|EIU84158.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|392175983|gb|EIV01644.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|392202752|gb|EIV28348.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392248910|gb|EIV74386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|392257278|gb|EIV82732.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
Length = 823
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|281491118|ref|YP_003353098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis KF147]
gi|281374868|gb|ADA64387.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis KF147]
gi|374672634|dbj|BAL50525.1| ATP-dependent protease ATP-binding subunit [Lactococcus lactis
subsp. lactis IO-1]
Length = 816
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 262 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 321
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 322 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 376
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 377 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 434
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 435 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|123967762|ref|YP_001008620.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. AS9601]
gi|123197872|gb|ABM69513.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
ClpB [Prochlorococcus marinus str. AS9601]
Length = 920
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L+EK+ Q++AI V+S I + R G + SP+R I F F GP GK ++A +LA
Sbjct: 616 LSEKVIGQEKAIEVVSAAIRRARVGMK-----SPKRPIGSFLFMGPTGVGKTELAKSLAT 670
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++ ++ + D+ + + PP + GG L + V +
Sbjct: 671 VLFDEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQ--------LTEAVR----R 718
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 719 KPYSVILLDEIEKAHAEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNL 770
>gi|449440498|ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSC----PDLNCQFDLSNWK---------- 296
+L +R EL SA V+ A+S + +++ Q +S+W
Sbjct: 540 ELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTD 599
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L +++ QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 600 ESDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 654
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 655 GKSELAKALAAYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 708
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 709 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 764
>gi|295104191|emb|CBL01735.1| ATP-dependent chaperone ClpB [Faecalibacterium prausnitzii SL3/3]
Length = 870
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 572 LHQRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 626
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 627 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 680
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 480
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 681 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 740
Query: 481 KFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ S E AK ++ +L P +NR
Sbjct: 741 QGSNELSEDAKHQIDLLLKSKFRPEFLNR 769
>gi|160944925|ref|ZP_02092152.1| hypothetical protein FAEPRAM212_02441 [Faecalibacterium prausnitzii
M21/2]
gi|158444109|gb|EDP21113.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
M21/2]
Length = 870
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 572 LHQRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 626
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 627 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 680
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 480
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 681 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 740
Query: 481 KFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ S E AK ++ +L P +NR
Sbjct: 741 QGSNELSEDAKHQIDLLLKSKFRPEFLNR 769
>gi|357149204|ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 921
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL----SNWK---------- 296
+L ++ EL +A ++ S A++ S L + D+ S+W
Sbjct: 532 ELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSD 591
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L ++I QDEA+ IS+ I + R G ++ P R I F F+GP
Sbjct: 592 ESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKN-----PNRPIASFIFSGPTGV 646
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 647 GKSELAKALASYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 700
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P +VV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 701 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 756
>gi|418036954|ref|ZP_12675345.1| hypothetical protein LLCRE1631_00152 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|354695099|gb|EHE94721.1| hypothetical protein LLCRE1631_00152 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 816
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 262 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 321
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 322 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 376
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 377 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 434
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 435 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|385830135|ref|YP_005867948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis CV56]
gi|326406143|gb|ADZ63214.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactococcus
lactis subsp. lactis CV56]
Length = 816
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 262 CCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIA 321
++T+ G Q+ +S S +L + L +++ Q+EAIS +S+ I
Sbjct: 487 AVASTLTGVPITQMTKSESDRLINLE------------KELHKRVVGQEEAISAVSRAIR 534
Query: 322 QRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP---- 376
+ R+G D RR + F F GP GK ++A ALA+ ++G ++N I D+
Sbjct: 535 RARSGVAD-----SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEK 589
Query: 377 --QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQN 434
+ PP + VG D G L + V KP SVV L+ V+KA V N
Sbjct: 590 HSTSRLIGAPPGY----VGYDE----GGQLTERVR----NKPYSVVLLDEVEKAHPDVFN 637
Query: 435 SLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ + + G + D+ GR+V N I + S+
Sbjct: 638 IMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|366090489|ref|ZP_09456855.1| ATP-binding Clp protease subunit [Lactobacillus acidipiscis KCTC
13900]
Length = 823
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EAI+ IS+ I + R+G D P R I F F GP GK ++A ALA
Sbjct: 511 LHKRVIGQNEAIAAISKAIRRARSGLGD-----PTRPIGSFMFLGPTGVGKTELAKALAG 565
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++N + D+ + + PP + VG D G L++ V
Sbjct: 566 AMFGDEDNMVRIDMSEYMEKYSTSRLIGAPPGY----VGYDE----GGQLSEKVR----N 613
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 614 KPYSVVLLDEVEKAHPDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL 665
>gi|319789343|ref|YP_004150976.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
gi|317113845|gb|ADU96335.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
Length = 824
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKR 352
K L L +++ Q EA+ +++ I + R G A+ R I F F GP GK
Sbjct: 495 KLKRLEEELHKRVVGQHEAVEAVAKAIKRSRLGIR----ANVNRPIGCFLFLGPTGVGKT 550
Query: 353 KIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLAD 406
++A ALAE ++G ++ I D+ + + +PP + VG + G L +
Sbjct: 551 ELAKALAEYLFGDEKALIRIDMSEYMEKHSVSRLIGSPPGY----VGYEE----GGQLTE 602
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS- 465
V +KP SV+ L+ ++KA V N L + ++ G+L D GR VS +N I + S+
Sbjct: 603 AVR----RKPYSVILLDEIEKAHPDVLNILLQIMEDGRLTDGLGRTVSFTNTILIMTSNL 658
Query: 466 ----FVEDARILPSEMKDCKFSEEKIYRAKSRL---TQILIEPALVNR 506
+ R + E+ D K E R KS + + +P +NR
Sbjct: 659 GAKHLISAQRGMGFEVADGKEEERSFERMKSLVLDEVKRYFKPEFINR 706
>gi|154487051|ref|ZP_02028458.1| hypothetical protein BIFADO_00889 [Bifidobacterium adolescentis
L2-32]
gi|154084914|gb|EDN83959.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium adolescentis L2-32]
Length = 864
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRARVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 573 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 621 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|159037904|ref|YP_001537157.1| ATPase [Salinispora arenicola CNS-205]
gi|157916739|gb|ABV98166.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 848
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L EK+ QD+A++ +++ + + RTG D P R + F F GP GK ++A ALAE
Sbjct: 533 LHEKVVGQDDAVNAVAEAVRRSRTGLAD-----PERPMGSFLFLGPTGVGKTELARALAE 587
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ E V G + G A + + ++P +VV
Sbjct: 588 ALFGEADRMVRVDMS----EFQERHTVSRLV--GAPPGYVGYEEAGQLTEAVRRRPYAVV 641
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G+L DS GR V+ N + + S+
Sbjct: 642 LLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|307150870|ref|YP_003886254.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981098|gb|ADN12979.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 790
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E+I QDEA+ +S+ + + R G +D P R I F F GP GK ++A ALA
Sbjct: 474 LHERIIGQDEAVKAVSRAVRRARVGMKD-----PNRPIASFIFAGPTGVGKTELAKALAT 528
Query: 361 IIYGGKENFICADLC----PQDGE--MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ P + +PP + +G D G L + V +
Sbjct: 529 FLFGSADAMIRLDMSEFMEPHTVSKLIGSPPGY----IGYDE----GGQLTEAVR----R 576
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP +V+ + ++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 577 KPYTVILFDEIEKAHPDVFNTLLQLLDDGRLTDAKGRTVDFKNTLIIMTSN 627
>gi|270159567|ref|ZP_06188223.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|289165637|ref|YP_003455775.1| endopeptidase Clp ATP-binding subunit B [Legionella longbeachae
NSW150]
gi|269987906|gb|EEZ94161.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|288858810|emb|CBJ12724.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
longbeachae NSW150]
Length = 859
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q+EAI +S I + R G D P R I F F GP GK ++ ALA
Sbjct: 566 LHNRLIGQNEAIEAVSNAIRRSRAGLSD-----PNRPIGSFLFLGPTGVGKTELCKALAT 620
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E + D+ + + PP + GG Y+ + +
Sbjct: 621 FLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRR 668
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SV+ L+ V+KA V N L + + G+L D GR V N I V S+ + L
Sbjct: 669 RPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSN---LI 725
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
EM + KF E+I A + + P +NR
Sbjct: 726 QEMGN-KFKYEQIKEAVMEMVRQHFRPEFINR 756
>gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus ATCC 19977]
gi|420862333|ref|ZP_15325729.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|420866918|ref|ZP_15330305.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|420876221|ref|ZP_15339597.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|420913205|ref|ZP_15376517.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|420919524|ref|ZP_15382823.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|420925292|ref|ZP_15388581.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|420964834|ref|ZP_15428051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
gi|420975640|ref|ZP_15438826.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|420981019|ref|ZP_15444192.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|421005578|ref|ZP_15468696.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|421011064|ref|ZP_15474163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|421016167|ref|ZP_15479237.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|421021609|ref|ZP_15484661.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|421027390|ref|ZP_15490429.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|421039150|ref|ZP_15502161.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|421046568|ref|ZP_15509568.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|169239617|emb|CAM60645.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus]
gi|392067696|gb|EIT93544.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|392075249|gb|EIU01083.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|392077494|gb|EIU03325.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|392115199|gb|EIU40968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|392135367|gb|EIU61107.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|392140949|gb|EIU66675.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|392173585|gb|EIU99252.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|392176817|gb|EIV02475.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|392204370|gb|EIV29958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|392213495|gb|EIV39051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|392217460|gb|EIV42996.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|392217638|gb|EIV43172.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|392227364|gb|EIV52878.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|392233350|gb|EIV58849.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|392236021|gb|EIV61519.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|392258368|gb|EIV83814.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
Length = 844
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q++A+ +S+ I + R+G +D P R I F F GP GK ++A
Sbjct: 510 LEKILHKRVIGQEQAVGSVSRAIRRSRSGLKD-----PNRPIGSFMFLGPTGVGKTELAK 564
Query: 357 ALAEIIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G +E + D+ + +PP + VG D G L + +
Sbjct: 565 ALAEAMFGNEEALVRVDMSEFMEKYSTSRLIGSPPGY----VGYDE----GGQLTEKIR- 615
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+KP SV+ + V+KA V N L + + G L DS GR+V N + + S+
Sbjct: 616 ---QKPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDSKGRKVDFKNTVMIMTSNL 668
>gi|357637096|ref|ZP_09134971.1| Clp amino terminal domain protein [Streptococcus macacae NCTC
11558]
gi|357585550|gb|EHJ52753.1| Clp amino terminal domain protein [Streptococcus macacae NCTC
11558]
Length = 813
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 264 SATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQR 323
+A I L++ S LN Q D + L + L +++ QDEA+S +S+ I +
Sbjct: 476 AAVTETDILKTLSKLSGIPVSKLN-QTDSRKYLNLEKELHKRVIGQDEAVSSVSRAIRRN 534
Query: 324 RTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMN 382
++G + RR I F F GP GK ++A ALAEI++ + I D+
Sbjct: 535 QSGIR-----TGRRPIGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMS------E 583
Query: 383 NPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQT 442
KF + G + G + ++ KP +V+ + V+KA + N L + +
Sbjct: 584 YMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYAVLLFDEVEKAHPDIFNILLQVLDD 643
Query: 443 GKLPDSYGREVSVSNAIFVTASSF 466
G L DS GR+V SN I + S+
Sbjct: 644 GVLTDSRGRKVDFSNTIIIMTSNL 667
>gi|317123796|ref|YP_004097908.1| ATPase AAA [Intrasporangium calvum DSM 43043]
gi|315587884|gb|ADU47181.1| ATPase AAA-2 domain protein [Intrasporangium calvum DSM 43043]
Length = 874
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I ++A+ +SQ I + R G +D PRR F F GP GK ++A LAE
Sbjct: 517 LHKRIVGMNDAVKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKTLAE 571
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 572 FLFGSEDALIQLDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 625
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 626 LFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNTVIIMTTNL 671
>gi|291538077|emb|CBL11188.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis XB6B4]
Length = 815
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
+ + L L +++ Q++A+S +++ + + R G +D P+R I F F GP GK
Sbjct: 504 ARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKD-----PKRPIGSFLFLGPTGVGK 558
Query: 352 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
+I+ ALAE ++G +++ I D+ + +PP + GG
Sbjct: 559 TEISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ---------- 608
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N I + S+
Sbjct: 609 --LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
Query: 466 FVEDARILPSEM 477
A I P ++
Sbjct: 667 AGAQAIIEPKKL 678
>gi|289450441|ref|YP_003474803.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184988|gb|ADC91413.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 924
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D + K L + L ++ QD A+ + Q I + R G +D P+R I F F G
Sbjct: 531 DTTRLKNLDKELKSRVIGQDAAVDAVVQAIRRGRLGLKD-----PQRPIGSFLFLGTTGV 585
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKT 403
GK ++A ALAE+++G I D+ + + +PP + VG D G
Sbjct: 586 GKTELAKALAEVMFGDPNAMIRLDMSEYMEKFDVSKLIGSPPGY----VGYDE----GGQ 637
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L + V + P SV+ + ++KA V N+L + ++ G+L DS GR V +N I +
Sbjct: 638 LTEKVR----RHPYSVILFDEIEKAHPDVFNALLQILEDGRLTDSQGRTVKFANTIIIMT 693
Query: 464 SSF 466
S+
Sbjct: 694 SNL 696
>gi|313139902|ref|ZP_07802095.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
gi|313132412|gb|EFR50029.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
Length = 867
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 527 LHKRIIGQDEAVSALSRSIRRTRVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 581
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 582 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 629
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 630 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 681
>gi|163848025|ref|YP_001636069.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222525912|ref|YP_002570383.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669314|gb|ABY35680.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449791|gb|ACM54057.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 833
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +I Q EAI IS+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 518 LHSRIVGQHEAIVTISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCP-QDGE-----MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E I D+ Q+ + +PP + GG L D V +
Sbjct: 573 FMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGYGEGGQ--------LTDAVR----R 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV + ++KA N L + ++ G L D GR V N I + S+
Sbjct: 621 KPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSN 671
>gi|365868512|ref|ZP_09408063.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|397678519|ref|YP_006520054.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense str. GO 06]
gi|418252108|ref|ZP_12878120.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|419710796|ref|ZP_14238260.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|419713561|ref|ZP_14240985.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|420878246|ref|ZP_15341613.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|420935189|ref|ZP_15398459.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|420950195|ref|ZP_15413442.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|420995114|ref|ZP_15458260.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|420996080|ref|ZP_15459223.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|421047351|ref|ZP_15510349.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353448368|gb|EHB96773.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|364000603|gb|EHM21801.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|382939686|gb|EIC64012.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|382946259|gb|EIC70545.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|392083155|gb|EIU08980.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|392146696|gb|EIU72417.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|392165281|gb|EIU90968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|392181216|gb|EIV06868.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|392191900|gb|EIV17525.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|392243903|gb|EIV69386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898]
gi|395456784|gb|AFN62447.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense str. GO 06]
Length = 844
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q+EA+ +S+ + + R G +D P+R I F F GP GK ++A ALAE ++
Sbjct: 508 RVIGQEEAVVAVSKAVRRARAGLKD-----PKRPIGSFVFLGPTGVGKTELARALAEAMF 562
Query: 364 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + + +PP + GG + ++ +KP
Sbjct: 563 GDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ------------LTEKVRRKPY 610
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+ +A
Sbjct: 611 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEA 663
>gi|293601973|ref|ZP_06684429.1| ATPase, partial [Achromobacter piechaudii ATCC 43553]
gi|292819596|gb|EFF78621.1| ATPase [Achromobacter piechaudii ATCC 43553]
Length = 810
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 33/276 (11%)
Query: 243 EPKEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCP--DLNCQFDLSNWKTLFR 300
E KE K L E + SA V Q+ S + P +L + + L +
Sbjct: 552 ETKEAELKKLVEEWERERASGSAEVKAEHVAQIV-SRLTGIPVNELTVE-EREKLLHLEQ 609
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++ + R G + G P F F GP GK ++A ALAE
Sbjct: 610 RLHERLVGQDEAVRAVADAVRLARAGLRE--GGKPV--ATFLFLGPTGVGKTELAKALAE 665
Query: 361 IIYGGKENFICADLCPQDGEMNN-------PPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
IYG + + D+ + GE + PP + VG D G L + V
Sbjct: 666 SIYGDEGALLRIDMS-EYGERHTVARLVGAPPGY----VGYDE----GGQLTEKVR---- 712
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + G+L D GR V +N I + S+ D I+
Sbjct: 713 RKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD--II 770
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+K + E+ + K + +L P +NR
Sbjct: 771 QRRLKARGAAGEEYEKTKFEVMDVLRGHFRPEFLNR 806
>gi|222152128|ref|YP_002561288.1| stress response-related Clp ATPase ClpC [Macrococcus caseolyticus
JCSC5402]
gi|222121257|dbj|BAH18592.1| truncated stress response-related Clp ATPase ClpC [Macrococcus
caseolyticus JCSC5402]
Length = 545
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ Q +A+S IS+ + + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 243 LHNRVIGQSDAVSSISKAVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELAKALAE 297
Query: 361 IIYGGKENFICADLCP------QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + +PP + VG D G L + V +
Sbjct: 298 AMFGEEDAMIRVDMSEFMEKHSVSRMVGSPPGY----VGHDD----GGQLTEKVR----R 345
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ + ++KA V N L + + G+L DS GR V N + + S+ +
Sbjct: 346 KPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSN------VGA 399
Query: 475 SEMKDCKF 482
E+KD KF
Sbjct: 400 QEIKDNKF 407
>gi|239617275|ref|YP_002940597.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239506106|gb|ACR79593.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 794
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 296 KTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW--FNFTGPDLCGKRK 353
K L + + E+ Q+EA+S ++ TI + R G + +P R W F F GP GK +
Sbjct: 498 KNLEKLIHERFIDQEEAVSAVAHTIRRARAGLK-----APNRP-WGSFLFLGPTGVGKTE 551
Query: 354 IAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADY 407
+A LA I++G ++ I D+ + + PP + GG +
Sbjct: 552 LAKTLANILFGSEDAMIRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTE--------- 602
Query: 408 VAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFV 467
+ ++P SV+ L+ V+KA V N L + + G+L D G+ V+ SN I + S+
Sbjct: 603 ---AVRRRPYSVILLDEVEKAHPDVHNVLLQVMDDGRLTDGKGKTVNFSNTILIMTSN-- 657
Query: 468 EDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ EM KF E + +L +P +NR
Sbjct: 658 ----VGSEEMTKGKFDENTTALVEQKLKSAF-KPEFLNR 691
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 271 ISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDH 330
I+ L++S+ L + + +T+ L ++ QDEAI +S+ I + R G +D
Sbjct: 488 IAEVLSKSTGIPVFKLTAE-ETDRLRTMEDELHRRVIGQDEAIKSLSRAIRRTRAGLKDP 546
Query: 331 HGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGE-----MNNP 384
+ S F F GP GK ++A +LAE ++G ++ I D+ Q+ P
Sbjct: 547 NRPSG----SFIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEFQEKHTVSRLFGAP 602
Query: 385 PKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGK 444
P + GG + ++ ++P SVV + V+KA + NSL + ++ G+
Sbjct: 603 PGYVGYEEGGQ------------LTEKVRRRPFSVVLFDEVEKAHQDLFNSLLQILEDGR 650
Query: 445 LPDSYGREVSVSNAIFVTASSF 466
L DS GR V N + + ++
Sbjct: 651 LTDSQGRVVDFKNTVIIMTTNL 672
>gi|397654739|ref|YP_006495422.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
gi|393403695|dbj|BAM28187.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
Length = 885
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|377810002|ref|YP_005005223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
claussenii ATCC BAA-344]
gi|361056743|gb|AEV95547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
claussenii ATCC BAA-344]
Length = 825
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L E++ QDEA+S +++ I + R+G +D P+R I F F GP GK ++A
Sbjct: 512 LEKTLHERVIGQDEAVSAVARAIRRARSGLKD-----PKRPIGSFMFLGPTGVGKTELAK 566
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
LA++++G ++N I D+ ++ + G + + G + ++ +KP
Sbjct: 567 TLADVMFGSEDNMIRIDMS------EYMERYSTSRLVGSAPGYVGYDEGGQLTEQVRRKP 620
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV + V+KA V N L + + G L DS GR V N I + S+
Sbjct: 621 YSVVLFDEVEKAHPDVFNLLLQVLDDGFLTDSKGRRVDFRNTILIMTSNL 670
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 506 LHGRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 561 SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 609 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 659
>gi|337291601|ref|YP_004630622.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|334699907|gb|AEG84703.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
Length = 885
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|325295444|ref|YP_004281958.1| ATPase AAA [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065892|gb|ADY73899.1| ATPase AAA-2 domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 820
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q+EA+ +++ I + R G +S +R I F F GP GK ++A ALAE
Sbjct: 503 LHKRVVGQEEAVKAVAKAIKRSRLGIR----SSAQRPIGSFLFLGPTGVGKTELAKALAE 558
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + GG L + V +
Sbjct: 559 ALFGDEKAMIRIDMSEYMEKHTVSRLIGAPPGYIGYEEGGQ--------LTEAVR----R 606
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS-----FVED 469
KP +V+ L+ ++KA V N L + ++ G+L D GR VS +NAI + S+ +
Sbjct: 607 KPYTVILLDEIEKAHPDVLNILLQIMEDGRLTDGLGRTVSFTNAILIMTSNLGAKHLISS 666
Query: 470 ARILPSEMKDCKFSEEKIYRAKSRL---TQILIEPALVNR 506
+ + E+ D K E R KS + + +P VNR
Sbjct: 667 QKGMGFEVTDGKEEERSFERMKSFVLDEVKRYFKPEFVNR 706
>gi|334564013|ref|ZP_08517004.1| ATP-dependent Clp protease [Corynebacterium bovis DSM 20582]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALAE
Sbjct: 524 LHKRIIGQEDAVRAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAE 578
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 579 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 632
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 633 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 678
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 24/251 (9%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +++++ + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 511 LHQRVVGQDEAVRAVARSVRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 565
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ + D+ +F + G + G + + +KP +VV
Sbjct: 566 ALFGDEDALVRLDMS------EYMERFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYTVV 619
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE---- 476
L+ ++KA V N L + ++ G+L D+ GR V N + + S+ L E
Sbjct: 620 LLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV--GVHTLRKEGTLG 677
Query: 477 MKDCKFSEEKIYRAKSRLTQIL---IEPALVNRSSSQKLSASETSEGMSHQKLLNKRKLI 533
+ + E R K R+T+ L P +NR + S T+E + L +++
Sbjct: 678 FRTEQEREASYERMKERVTEELKRTFRPEFLNRIDEIIVFHSLTAEHIKKIVGLMLKEVA 737
Query: 534 GRNDNPQQHDT 544
GR ++HD
Sbjct: 738 GRM---KEHDV 745
>gi|257440882|ref|ZP_05616637.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
A2-165]
gi|257196662|gb|EEU94946.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
A2-165]
Length = 875
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA++ +S+ I + R G A+P R I F F GP GK ++A ALA+
Sbjct: 577 LHKRVIGQDEAVTKVSEAILRSRAGI-----ANPNRPIGSFLFLGPTGVGKTELAKALAQ 631
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ + N + D+ KF + G + G + + +KP SVV
Sbjct: 632 ALFDDERNMVRIDMT------EYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVV 685
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDC 480
+ V+KA V N L + + G++ DS GR V N + + S+ D + E +
Sbjct: 686 LFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTVIILTSNLGSDIILNDLEQRRA 745
Query: 481 KFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ S E AK ++ +L P +NR
Sbjct: 746 QGSNELSDEAKHQIDLLLRSKFRPEFLNR 774
>gi|357390336|ref|YP_004905176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311896812|dbj|BAJ29220.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 252 LTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDE 311
+ E +EL AT G +L + SS + + L +++ Q++
Sbjct: 474 VAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDE------------LHKRVIGQED 521
Query: 312 AISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFI 370
AI +SQ I + R G +D P+R F F GP GK +++ LAE ++G ++ I
Sbjct: 522 AIKALSQAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALI 576
Query: 371 CADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADV 430
D+ + E + + + G + G + ++ +KP SVV + V+KA
Sbjct: 577 ALDMS-EFSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHP 630
Query: 431 HVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ NSL + ++ G+L DS GR V N + + ++
Sbjct: 631 DIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 508 LHERVIGQDEAVEAVAKAIRRARVGLKD-----PKRPIGSFIFLGPTGVGKTELSKALAE 562
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + +PP + VG + G L + V +
Sbjct: 563 ALFGDENAMIRLDMSEYMERHTVSKLIGSPPGY----VGFEE----GGQLTEKVR----R 610
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+P SV+ L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 611 RPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSN 661
>gi|256847752|ref|ZP_05553197.1| ATP-dependent chaperone ClpB [Lactobacillus coleohominis 101-4-CHN]
gi|256715441|gb|EEU30417.1| ATP-dependent chaperone ClpB [Lactobacillus coleohominis 101-4-CHN]
Length = 827
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ QDEA++ +++ I + R+G +D P R I F F GP GK ++A
Sbjct: 513 LEKGLHQRVIGQDEAVTALARAIRRARSGLKD-----PHRPIGSFMFLGPTGVGKTELAK 567
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ ++ + G + + G + ++ + P
Sbjct: 568 ALAEEMFGSEDNMIRIDMSEYQ------ERYSASRLVGAAPGYVGYEEGGQLTEKVRQHP 621
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARI 472
SVV L+ V+KA+V + N L + + G L DS GR+V N I + S+ + D +
Sbjct: 622 YSVVLLDEVEKANVDIFNLLLQVLDDGFLTDSKGRKVDFRNTILIMTSNLGATQLRDEKT 681
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ KD + + + A ++ P +NR
Sbjct: 682 VGFGAKDLQDNYAAMKAAIQEQLKLHFRPEFLNR 715
>gi|240144490|ref|ZP_04743091.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
gi|257203477|gb|EEV01762.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
Length = 815
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
+ + L L +++ Q++A+S +++ + + R G +D P+R I F F GP GK
Sbjct: 504 ARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKD-----PKRPIGSFLFLGPTGVGK 558
Query: 352 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
+I+ ALAE ++G +++ I D+ + +PP + GG
Sbjct: 559 TEISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQ---------- 608
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++ ++ + P SV+ + ++KA V N L + + G + DS GR+V N I + S+
Sbjct: 609 --LSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
Query: 466 FVEDARILPSEM 477
A I P ++
Sbjct: 667 AGAQAIIEPKKL 678
>gi|119025591|ref|YP_909436.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|118765175|dbj|BAF39354.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium adolescentis ATCC 15703]
Length = 864
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QDEA+S +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 518 LHKRIIGQDEAVSALSRSIRRARVGLKD-----PKRPAGSFIFAGPTGVGKTELAKALAE 572
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + PP + GG+ + ++ +
Sbjct: 573 FLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE------------LTEKVRR 620
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA + N+L + + G L D GR+V N I + ++
Sbjct: 621 KPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNL 672
>gi|392401263|ref|YP_006437863.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
gi|390532341|gb|AFM08070.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
Length = 874
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 517 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 571
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 572 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 625
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 626 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 671
>gi|347534793|ref|YP_004841463.1| Negative regulator of genetic competence clpC/mecB [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504849|gb|AEN99531.1| Negative regulator of genetic competence clpC/mecB [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 825
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D L L +++ QDEA++ +++ + + R+G +D P R I F F GP
Sbjct: 510 DADRLVNLENVLHKRVIGQDEAVTAVAKAVRRARSGLKD-----PNRPIGSFIFLGPTGV 564
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A LAE ++G +++ I D+ K+ + G + + G +
Sbjct: 565 GKTELAKDLAEEMFGSEDDVIRVDMS------EYMEKYSTSRLVGSAPGYVGYEEGGQLT 618
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++ K P SVV L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 619 EKVRKHPYSVVLLDEVEKAHPDVFNLLLQVLDDGFLTDSKGRKVDFKNTIIIMTSNL 675
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R I F F GP GK ++A ALAE
Sbjct: 505 LHKRVIGQDEAVEAVSRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + + D+ + PP + GG + ++ +
Sbjct: 560 AMFGDENAVVRIDMSEYMERHTTSRLIGAPPGYVGYEEGGQ------------LTEKIRR 607
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV L+ ++KA V N L + + G+L D GR V N + + S+
Sbjct: 608 KPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV 659
>gi|375289379|ref|YP_005123920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371576668|gb|AEX40271.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|300859188|ref|YP_003784171.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|384505360|ref|YP_005682030.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
gi|300686642|gb|ADK29564.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302331444|gb|ADL21638.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|347531245|ref|YP_004838008.1| ATPase AAA-2 [Roseburia hominis A2-183]
gi|345501393|gb|AEN96076.1| ATPase AAA-2 [Roseburia hominis A2-183]
Length = 817
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
+ K L L +++ Q+EA+S +++ + + R G +D P+R I F F GP GK
Sbjct: 504 ARLKKLEATLHKRVIGQEEAVSAVAKAVRRGRVGLKD-----PKRPIGSFLFLGPTGVGK 558
Query: 352 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
+I+ ALAE ++G ++ I D+ + +PP + GG
Sbjct: 559 TEISKALAEAVFGQEQAMIRIDMSEYMEKHSVSKMIGSPPGYVGHEDGGQ---------- 608
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
++ ++ + P +V+ + ++KA V N L + + G + DS GR+V N I + S+
Sbjct: 609 --LSEKVRRNPYAVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFKNTIIIMTSN 666
Query: 466 FVEDARILPSEMKDCKFSEEK 486
A + P ++ ++EK
Sbjct: 667 AGAQAIVEPKKLGFASGNDEK 687
>gi|384516372|ref|YP_005711464.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|334697573|gb|AEG82370.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|210615483|ref|ZP_03290610.1| hypothetical protein CLONEX_02826 [Clostridium nexile DSM 1787]
gi|210150332|gb|EEA81341.1| hypothetical protein CLONEX_02826 [Clostridium nexile DSM 1787]
Length = 814
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 29/258 (11%)
Query: 293 SNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGK 351
+ K L + L +++ Q+EA+S +++ + + R G +D P+R I F F GP GK
Sbjct: 499 ARLKKLEQTLHKRVIGQEEAVSAVARAVKRGRVGLKD-----PKRPIGSFLFLGPTGVGK 553
Query: 352 RKIAIALAEIIYGGKENFICADLCPQ------DGEMNNPPKFYHQVVGGDSVQFRGKTLA 405
+++ ALAE ++G + I D+ + +PP + VG D G L+
Sbjct: 554 TELSKALAEALFGDENAMIRVDMSEYMEKHSVSKMIGSPPGY----VGHDD----GGQLS 605
Query: 406 DYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ V + P SVV + ++KA V N L + + G + DS GR+V N + + S+
Sbjct: 606 EKVR----RNPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSN 661
Query: 466 FVEDARILPSEM-----KDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLSASETSEG 520
A + P ++ +D +K+ ++L P +NR + S T +
Sbjct: 662 AGAKAIVDPKKLGFVTKEDAAGDYKKMKANVMDEVKLLFRPEFLNRIDEIIVFHSLTIDH 721
Query: 521 MSHQKLLNKRKLIGRNDN 538
M L ++LI R N
Sbjct: 722 MKKIVGLMCKELIRRVKN 739
>gi|384507453|ref|YP_005684122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|384511635|ref|YP_005691213.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|387137283|ref|YP_005693263.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206878|gb|ADL11220.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|341825574|gb|AEK93095.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|348607728|gb|AEP71001.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|154503279|ref|ZP_02040339.1| hypothetical protein RUMGNA_01103 [Ruminococcus gnavus ATCC 29149]
gi|336432911|ref|ZP_08612741.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796273|gb|EDN78693.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus gnavus ATCC 29149]
gi|336017581|gb|EGN47339.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 813
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 291 DLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
D + L L +++ Q+EA+S +++ + + R G + SP R I F F GP
Sbjct: 497 DAHRLQKLEETLHKRVIGQEEAVSAVTRAVKRGRVGLK-----SPNRPIGSFLFLGPTGV 551
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKT 403
GK +++ ALAE ++G +++ I D+ + + +PP + VG D G
Sbjct: 552 GKTELSKALAEALFGREDSMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDE----GGQ 603
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
L+D V P SV+ + ++KA V N L + + G++ DS GR V SN + +
Sbjct: 604 LSDKVRTH----PYSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRVVDFSNTVIIMT 659
Query: 464 SSFVEDARILPSEM 477
S+ A + P ++
Sbjct: 660 SNAGAKAIVDPKKL 673
>gi|84497246|ref|ZP_00996068.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
gi|84382134|gb|EAP98016.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ D+AI +SQ I + R G +D PRR F F GP GK ++A LA
Sbjct: 515 LHKRVVGMDDAIKALSQAIRRTRAGLKD-----PRRPGGSFIFAGPTGVGKTELAKTLAA 569
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ I D+ + E + + + G + G + ++ +KP SVV
Sbjct: 570 FLFGDEDSLIQLDMS-EYSEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 623
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 624 LFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNL 669
>gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|387153291|ref|YP_005702227.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
gi|54035770|sp|Q72AW6.1|CLPB_DESVH RecName: Full=Chaperone protein ClpB
gi|46449700|gb|AAS96350.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233735|gb|ADP86589.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
Length = 865
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EA+ +S+ + + R G D P R I F F GP GK ++ LAE
Sbjct: 571 LHERVVGQEEAVDAVSEAVLRARAGLSD-----PSRPIGSFIFLGPTGVGKTELCKTLAE 625
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ + + PP + VG D G L + V +
Sbjct: 626 ALFDTEENIVRLDMSEYMEKHAVARLIGAPPGY----VGYDE----GGQLTEAVR----R 673
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + V+KA V N+L + + G+L DS+GR V N I + S+
Sbjct: 674 KPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNI 725
>gi|383314945|ref|YP_005375800.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|384509550|ref|YP_005686218.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|385808249|ref|YP_005844646.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
gi|308277132|gb|ADO27031.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|380870446|gb|AFF22920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|383805642|gb|AFH52721.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|402813960|ref|ZP_10863554.1| chaperone protein ClpB [Paenibacillus alvei DSM 29]
gi|402507807|gb|EJW18328.1| chaperone protein ClpB [Paenibacillus alvei DSM 29]
Length = 551
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 242 LHQRVIGQDEAVKAVSRAIRRARAGLKD-----PKRPMGSFIFLGPTGVGKTELARALAE 296
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + I D+ + + PP + GG + ++ +
Sbjct: 297 SLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQ------------LTEKVRR 344
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 345 KPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSN 395
>gi|386741076|ref|YP_006214256.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
gi|384477770|gb|AFH91566.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|375097571|ref|ZP_09743836.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374658304|gb|EHR53137.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 849
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 290 FDLSNWKT--LFRALTE---KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 343
F L+ +T L R TE +I Q++A+ +SQ I + R G +D P+R F F
Sbjct: 494 FKLTEEETTRLLRMETELHKRIIGQEDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIF 548
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKT 403
GP GK +++ ALA ++G + I D+ GE ++ ++ + G + G
Sbjct: 549 AGPSGVGKTELSKALANFLFGEDDALIQIDM----GEFHD--RYTASRLFGAPPGYVGYE 602
Query: 404 LADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTA 463
+ ++ +KP SVV + ++KA + N+L + ++ G+L D GR V N + +
Sbjct: 603 EGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFT 662
Query: 464 SSF 466
S+
Sbjct: 663 SNL 665
>gi|373253679|ref|ZP_09541797.1| ATP-dependent Clp protease ATP-binding subunit [Nesterenkonia sp.
F]
Length = 868
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 294 NWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRK 353
K + L +++ Q+EAI +S+ I + R G +D + S F F GP GK +
Sbjct: 508 RLKRMEEELHKRVIGQEEAIKSLSRAIRRTRAGLKDPNRPSG----SFIFAGPTGVGKTE 563
Query: 354 IAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
+A LAE ++G ++ I D+ + E + + + G + G + ++
Sbjct: 564 LAKTLAEFLFGDEDALITLDMS-EYSEKHTVSRLF-----GAPPGYVGYEEGGQLTEKVR 617
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SVV + V+KA + NSL + ++ G+L DS GR+V N + + ++
Sbjct: 618 RRPFSVVLFDEVEKAHADLFNSLLQILEDGRLSDSQGRQVDFKNTVIIMTTNL 670
>gi|379716065|ref|YP_005304402.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|387139348|ref|YP_005695327.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387141325|ref|YP_005697303.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389851114|ref|YP_006353349.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
gi|349735826|gb|AEQ07304.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355393116|gb|AER69781.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377654771|gb|AFB73120.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|388248420|gb|AFK17411.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
Length = 885
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 528 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 583 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 637 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNL 682
>gi|326328759|ref|ZP_08195095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
gi|325953381|gb|EGD45385.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
Length = 861
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +S+ I + R G +D P+R F F GP GK ++ LAE
Sbjct: 518 LHKRVIGQDEAVKALSRAIRRTRAGLKD-----PKRPGGSFIFAGPSGVGKTWLSKTLAE 572
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ + GE + + + G + G + ++ +KP SVV
Sbjct: 573 FLFGDEDALIQLDMS-EFGEKHTVSRLF-----GSPPGYVGYEEGGQLTEKVRRKPFSVV 626
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G+L DS GR V N + + ++
Sbjct: 627 LFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNL 672
>gi|384190952|ref|YP_005576700.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|384192096|ref|YP_005577843.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|289178444|gb|ADC85690.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|340364833|gb|AEK30124.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
Length = 862
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 278 SSSSSCPDLN-CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPR 336
S S+ P Q + ++ + L ++I QDEA+S +S++I + R G +D P+
Sbjct: 504 SQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKD-----PK 558
Query: 337 RDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYH 389
R F F GP GK ++A ALA+ ++ ++ I D+ + PP +
Sbjct: 559 RPAGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVG 618
Query: 390 QVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSY 449
GG+ + ++ +KP SVV + ++KA + N+L + + G L D
Sbjct: 619 YEEGGE------------LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQ 666
Query: 450 GREVSVSNAIFVTASSF 466
GR+V N I + ++
Sbjct: 667 GRKVDFKNTIIILTTNL 683
>gi|120602336|ref|YP_966736.1| ATP-dependent Clp protease ATPase ClpB [Desulfovibrio vulgaris DP4]
gi|120562565|gb|ABM28309.1| ATPase AAA-2 domain protein [Desulfovibrio vulgaris DP4]
Length = 865
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ Q+EA+ +S+ + + R G D P R I F F GP GK ++ LAE
Sbjct: 571 LHERVVGQEEAVDAVSEAVLRARAGLSD-----PSRPIGSFIFLGPTGVGKTELCKTLAE 625
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +EN + D+ + + PP + VG D G L + V +
Sbjct: 626 ALFDTEENIVRLDMSEYMEKHAVARLIGAPPGY----VGYDE----GGQLTEAVR----R 673
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + V+KA V N+L + + G+L DS+GR V N I + S+
Sbjct: 674 KPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNI 725
>gi|111222022|ref|YP_712816.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111149554|emb|CAJ61248.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 873
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ +++ + + R+G D PRR + F F GP GK ++A L+E
Sbjct: 572 LHQRVVGQDEAVGLVADAVIRARSGIRD-----PRRPVGSFIFLGPTGVGKTELARTLSE 626
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +E I D+ + +PP + GG + + +
Sbjct: 627 ALFDAEEAMIRIDMSEYQERHTVSRLIGSPPGYVGYEEGGQLTE------------AVRR 674
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G+L D+ GR V+ +N + + S+
Sbjct: 675 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDARGRTVNFTNTVIIMTSNI 726
>gi|388456237|ref|ZP_10138532.1| endopeptidase Clp ATP-binding subunit B [Fluoribacter dumoffii
Tex-KL]
Length = 858
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
L ++ Q+EAI +S +I + R G D P R I F F GP GK ++ ALA
Sbjct: 565 VLHNRLIGQNEAIDAVSNSIRRSRAGLSD-----PNRPIGSFLFLGPTGVGKTELCKALA 619
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
++ +E + D+ + + PP + GG Y+ +
Sbjct: 620 SFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVR 667
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
++P SV+ L+ V+KA V N L + + G+L D GR V N I V S+ + L
Sbjct: 668 RRPYSVILLDEVEKAHADVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSN---L 724
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
EM + KF E+I A + + P +NR
Sbjct: 725 IQEMGN-KFKYEQIKDAVMEMVRQHFRPEFINR 756
>gi|392392052|ref|YP_006428654.1| chaperone ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523130|gb|AFL98860.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 826
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++A+ +S+ + + R G +D P+R + F F GP GK ++A AL+E
Sbjct: 514 LHQRVVGQEDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALSE 568
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + PP + +G D G L + V +
Sbjct: 569 ALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGY----IGHDE----GGQLTEAVR----R 616
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + ++ G+L D+ GR V NA+ + S+
Sbjct: 617 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSN 667
>gi|400535256|ref|ZP_10798793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
gi|400331614|gb|EJO89110.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|289752310|ref|ZP_06511688.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis T92]
gi|289692897|gb|EFD60326.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis T92]
Length = 682
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 348 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 402
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 403 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 456
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 457 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 502
>gi|431792439|ref|YP_007219344.1| chaperone ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782665|gb|AGA67948.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 827
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ Q++A+ +S+ + + R G +D P+R + F F GP GK ++A ALAE
Sbjct: 514 LHQRVVGQEDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELARALAE 568
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + + PP + GG + + +
Sbjct: 569 ALFGEEDALVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTE------------AIRR 616
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + ++ G+L D+ GR V NA+ + S+
Sbjct: 617 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSNV 668
>gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
gi|183178394|gb|ACC43504.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|116695325|ref|YP_840901.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
gi|113529824|emb|CAJ96171.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
Length = 924
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 29/266 (10%)
Query: 251 DLTERSQELSGCCSATVN-GSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQ 309
+LTE Q +G + V +I+ +++ + DL + K R L E++ Q
Sbjct: 542 ELTEAWQRKTGSETLEVTVAAIAEVVSRLTGIPVTDLTQEERQKLLKMEAR-LRERVVGQ 600
Query: 310 DEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEIIYGGKENF 369
D+A+ +S + R G G + R F F GP GK ++A ALAE ++G ++
Sbjct: 601 DDAVVAVSDAVRLSRAGL----GQANRPIATFLFLGPTGVGKTELAKALAETVFGDEQAI 656
Query: 370 ICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 423
I D+ + PP + VG D G L + V +KP SV+ L+
Sbjct: 657 IRIDMSEYMERHAVARLIGAPPGY----VGYDE----GGQLTERVR----RKPYSVILLD 704
Query: 424 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM---KDC 480
++KA V N L + G+L D GR V SN + + S+ A I+ + +D
Sbjct: 705 EIEKAHPDVNNVLLQVFDDGRLTDGKGRVVDFSNTVIIATSNL--GAPIIMDNLEQPEDK 762
Query: 481 KFSEEKIYRAKSRLTQILIEPALVNR 506
+ E+ + A ++ + P +NR
Sbjct: 763 RMPEKDLREALMKVLKGHFRPEFLNR 788
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q + L L ++ Q+EA+ +++ + + R G +D P+R I F F GP
Sbjct: 492 AQTETERLLNLEEILHSRVIGQEEAVKAVAKAVRRARAGLKD-----PKRPIGSFIFLGP 546
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFR 400
GK ++A ALAE ++G ++ I D+ + + +PP + GG
Sbjct: 547 TGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQ----- 601
Query: 401 GKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIF 460
+ ++ +KP SV+ L+ ++KA V N L + ++ G+L DS GR V N +
Sbjct: 602 -------LTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVL 654
Query: 461 VTASSFVEDA 470
+ S+ +A
Sbjct: 655 IMTSNVGAEA 664
>gi|417969541|ref|ZP_12610480.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
gi|344046258|gb|EGV41924.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
Length = 925
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQEEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE ++
Sbjct: 509 RVIGQNEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAEAMF 563
Query: 364 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + + +PP + GG + ++ +KP
Sbjct: 564 GDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRRKPY 611
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
SV+ L+ ++KA V N L + + G+L DS GR V N I V S+
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSN 659
>gi|150019935|ref|YP_001305289.1| ATPase [Thermosipho melanesiensis BI429]
gi|149792456|gb|ABR29904.1| ATPase AAA-2 domain protein [Thermosipho melanesiensis BI429]
Length = 818
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALA 359
AL +I QDEA+ I+++I + R+G +D PRR + F F GP GK ++A LA
Sbjct: 505 ALHNRIVGQDEAVKAIARSIRRARSGLKD-----PRRPVGVFLFLGPTGVGKTELAKTLA 559
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
E ++G ++ I D+ + + PP + VG + G TL + V
Sbjct: 560 EYLFGDEKALIRFDMSEYMEKFSVSRLIGAPPGY----VGYEE----GGTLTEKVR---- 607
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
++P SV+ + ++KA V N L + + G+L DS G V N I + S+
Sbjct: 608 RRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNI 660
>gi|312868898|ref|ZP_07729083.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris PB013-T2-3]
gi|417886746|ref|ZP_12530890.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris F0423]
gi|311095572|gb|EFQ53831.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris PB013-T2-3]
gi|341593137|gb|EGS35994.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris F0423]
Length = 827
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+ +++ I + R+G ++ P R I F F GP GK ++A
Sbjct: 511 LEKVLHKRVIGQNEAVDAVAKAIRRARSGLKN-----PNRPIGSFMFLGPTGVGKTELAK 565
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKP 416
ALAE ++G ++N I D+ KF + G + + G + ++ + P
Sbjct: 566 ALAEAMFGSEDNMIRIDMS------EYMEKFSTSRLIGAAPGYVGYDEGGQLTEKVRQHP 619
Query: 417 LSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
SVV L+ +KA V N L + + G L DS GR V N I + S+
Sbjct: 620 YSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDSKGRRVDFRNTIIIMTSNL 669
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ Q+EA+ IS+ I + R G +D P+R I F F GP GK ++A A+AE ++
Sbjct: 509 RVIGQNEAVKSISKAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAEAMF 563
Query: 364 GGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPL 417
G ++ I D+ + + +PP + GG + ++ +KP
Sbjct: 564 GDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRRKPY 611
Query: 418 SVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
SV+ L+ ++KA V N L + + G+L DS GR V N I V S+
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSN 659
>gi|423524922|ref|ZP_17501395.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|401169148|gb|EJQ76395.1| chaperone ClpB [Bacillus cereus HuA4-10]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423455303|ref|ZP_17432156.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|401134602|gb|EJQ42215.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423420779|ref|ZP_17397868.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
gi|401100489|gb|EJQ08483.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLKEDGSIKEE 744
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 251 DLTERSQELSGCCSATVNGSISNQLAQSSSSSCPDLNCQFDL----SNWK---------- 296
+L +R EL +A ++ S A++ S + + D+ S+W
Sbjct: 531 ELRDREMELKAQITALIDKSKEMIKAETDSGETGPMVTEADIQHIVSSWTGIPVEKVSTD 590
Query: 297 ------TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLC 349
+ L +++ QDEA+ IS+++ + R G ++ P R I F F GP
Sbjct: 591 ESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKN-----PNRPIASFIFAGPTGV 645
Query: 350 GKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVA 409
GK ++A ALA +G +E I D+ + E + K G + G T +
Sbjct: 646 GKSELAKALASYYFGSEEAMIRLDMS-EFMERHTVSKLI-----GSPPGYVGYTEGGQLT 699
Query: 410 WELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+ ++P SVV + ++KA V N + + ++ G+L DS GR V N + + S+
Sbjct: 700 EAVRRRPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 755
>gi|145296675|ref|YP_001139496.1| hypothetical protein cgR_2580 [Corynebacterium glutamicum R]
gi|140846595|dbj|BAF55594.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 925
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 533 LHKRIIGQEEAVKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAG 587
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++ I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 588 FLFGDDDSLIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 641
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 642 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 687
>gi|443493153|ref|YP_007371300.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
gi|442585650|gb|AGC64793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
Length = 848
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|423666938|ref|ZP_17641967.1| chaperone ClpB [Bacillus cereus VDM034]
gi|401304867|gb|EJS10414.1| chaperone ClpB [Bacillus cereus VDM034]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423481144|ref|ZP_17457834.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
gi|401146660|gb|EJQ54174.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|15835176|ref|NP_296935.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Nigg]
gi|14194530|sp|Q9PKA8.1|CLPC_CHLMU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|7190600|gb|AAF39398.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Nigg]
Length = 870
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +K+ QD+A++ I + I + RTG +D P R + F F GP GK +A +A
Sbjct: 549 LQKKVIGQDQAVASICRAIRRSRTGIKD-----PNRPMGSFLFLGPTGVGKTLLAQQIAV 603
Query: 361 IIYGGKENFICADLC------PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++GG+++ I D+ M +PP + GG ++ ++ +
Sbjct: 604 EMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGG------------HLTEQVRR 651
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+P VV + ++KA + + + + ++ G+L DS+GR++ N I + S+ D
Sbjct: 652 RPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGAD 706
>gi|379745192|ref|YP_005336013.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
gi|378797556|gb|AFC41692.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|365103058|ref|ZP_09333090.1| ClpV1 family type VI secretion ATPase [Citrobacter freundii
4_7_47CFAA]
gi|363645397|gb|EHL84660.1| ClpV1 family type VI secretion ATPase [Citrobacter freundii
4_7_47CFAA]
Length = 873
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 297 TLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAI 356
TL + ++ QD A++ I+Q + +TG +G F TGP GK + A+
Sbjct: 567 TLETQMGNRVVGQDYALNAIAQRLRASKTGLTPENGPQG----VFLLTGPSGTGKTETAL 622
Query: 357 ALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQV--VGGDSVQFRGKTLADYVAWELLK 414
ALA+I++GG+++ I +L E P H V + G + G + + K
Sbjct: 623 ALADILFGGEKSLITINLS----EYQEP----HTVSQLKGSPPGYVGYGQGGILTEAVRK 674
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SVV L+ +KA V N + G + D GRE+ N + + S+ DA ++
Sbjct: 675 RPYSVVLLDEAEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTSNLGGDA-VMQ 733
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
+ + +E +++ L + +PAL+ R
Sbjct: 734 MLEEQPETTESELHELLRPLLREHFQPALLAR 765
>gi|270285348|ref|ZP_06194742.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Nigg]
gi|270289364|ref|ZP_06195666.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum Weiss]
gi|301336745|ref|ZP_07224947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlamydia
muridarum MopnTet14]
Length = 854
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +K+ QD+A++ I + I + RTG +D P R + F F GP GK +A +A
Sbjct: 533 LQKKVIGQDQAVASICRAIRRSRTGIKD-----PNRPMGSFLFLGPTGVGKTLLAQQIAV 587
Query: 361 IIYGGKENFICADLC------PQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++GG+++ I D+ M +PP + GG ++ ++ +
Sbjct: 588 EMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGG------------HLTEQVRR 635
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVED 469
+P VV + ++KA + + + + ++ G+L DS+GR++ N I + S+ D
Sbjct: 636 RPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGAD 690
>gi|423472842|ref|ZP_17449585.1| chaperone ClpB [Bacillus cereus BAG6O-2]
gi|402427173|gb|EJV59284.1| chaperone ClpB [Bacillus cereus BAG6O-2]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|424854144|ref|ZP_18278502.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|356664191|gb|EHI44284.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
Length = 808
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QD+A+ I++ + + RTG D P R + F F GP GK ++A ALA
Sbjct: 507 LHRRVIGQDDAVRAIARAVRRSRTGMND-----PDRPVGSFLFLGPTGVGKTELAKALAA 561
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + + D+ + GE + + G + G A + ++ + P SV+
Sbjct: 562 TLFGDENKMLRLDMS-EFGERHTVSRLV-----GAPPGYVGYGEAGQLTEQVRRNPYSVI 615
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSE---- 476
L+ ++KA V N+L + + G+L D GR V N + + S+ D I+ S+
Sbjct: 616 LLDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTVLIMTSNLGSD--IISSKSGAL 673
Query: 477 ---MKDCKFSEEKIY-RAKSRLTQILIEPALVNR 506
D + SE+ + R + RL + + P +NR
Sbjct: 674 GFSTGDAEASEKPLRDRVRGRLRESM-RPEFLNR 706
>gi|294055770|ref|YP_003549428.1| ATP-dependent chaperone ClpB [Coraliomargarita akajimensis DSM
45221]
gi|293615103|gb|ADE55258.1| ATP-dependent chaperone ClpB [Coraliomargarita akajimensis DSM
45221]
Length = 870
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA++++S+ I + R G +D PRR I F F GP GK ++A LAE
Sbjct: 571 LHERVIGQDEAVTLVSEAILRARAGIKD-----PRRPIGSFLFLGPTGVGKTELARTLAE 625
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + + PP + VG D G L + V +
Sbjct: 626 SLFDTEDNIVRIDMSEYMEKHAVARLIGAPPGY----VGYDE----GGQLTEAVR----R 673
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SVV + ++KA V N L + + G++ D+ G V N + + S+
Sbjct: 674 KPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDAQGHTVDFKNTVIIMTSN 724
>gi|347750804|ref|YP_004858369.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
gi|347583322|gb|AEO99588.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
Length = 861
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++S + + R G +D P R I F F GP GK ++A ALA+
Sbjct: 568 LHERVIGQDEAVRLVSDAVLRARAGMKD-----PNRPIGSFIFLGPTGVGKTELAKALAQ 622
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ + + I D+ KF + G + G + + +KP SV+
Sbjct: 623 HLFDDENHMIRIDMS------EYMEKFAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVI 676
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ ++KA V N L + + G++ DS GR V NAI + S+
Sbjct: 677 LLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFKNAIVIMTSNI 722
>gi|423601390|ref|ZP_17577390.1| chaperone ClpB [Bacillus cereus VD078]
gi|401230817|gb|EJR37323.1| chaperone ClpB [Bacillus cereus VD078]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++ QD+A+ IS+ I + R G +D P+R I F F GP GK ++A A+AE
Sbjct: 506 LHNRVIGQDDAVKSISRAIRRARAGLKD-----PKRPIGSFIFLGPTGVGKTELARAVAE 560
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ I D+ + + +PP + GG + ++ +
Sbjct: 561 AMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQ------------LTEKVRR 608
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ L+ ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 609 KPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSN 659
>gi|336421968|ref|ZP_08602122.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009258|gb|EGN39252.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 812
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+S +++ I + R G +D P+R I F F GP GK +++
Sbjct: 503 LEQTLHKRVVGQEEAVSAVAKAIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 557
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + +PP + VG D G L++ V
Sbjct: 558 ALAEALFGNEDAMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 608
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+ P SV+ + ++KA V N L + + G + DS GR+V N + + S+ A
Sbjct: 609 ---RHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAGAQA 665
Query: 471 RILPSEM 477
I P ++
Sbjct: 666 IIDPKKL 672
>gi|254552708|ref|ZP_05143155.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length = 303
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 143 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 197
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 198 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 251
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 252 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 297
>gi|295425660|ref|ZP_06818347.1| ATPase [Lactobacillus amylolyticus DSM 11664]
gi|295064676|gb|EFG55597.1| ATPase [Lactobacillus amylolyticus DSM 11664]
Length = 824
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+S +++ I + R+G +D RR I F F GP GK ++A ++A
Sbjct: 517 LHERVIGQDKAVSAVARAIRRSRSGIKDE-----RRPIGSFLFLGPTGVGKTELAKSVAA 571
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G ++N I D+ E +P + G + + G ++ ++ + P SVV
Sbjct: 572 AMFGSEDNMIRIDMS----EYMDPVASSKLI--GSAPGYVGYEEGGQLSEQVRRHPYSVV 625
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
L+ V+KA V N L + + G L DS GR+V N I + S+
Sbjct: 626 LLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 671
>gi|229166111|ref|ZP_04293872.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
gi|423594796|ref|ZP_17570827.1| chaperone ClpB [Bacillus cereus VD048]
gi|228617333|gb|EEK74397.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
gi|401223748|gb|EJR30316.1| chaperone ClpB [Bacillus cereus VD048]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|168701713|ref|ZP_02733990.1| negative regulator of genetic competence ClpC/MecB [Gemmata
obscuriglobus UQM 2246]
Length = 842
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 245 KEPISKDLTERSQELSGCCSATVNGSISNQLAQSSSSSCPD------LNCQFDLSNWKTL 298
KE K E+++E G V + +++ + LN + +L N
Sbjct: 470 KETQHKQWREKAKETDGVVDEEVIAEVVSKMTGVPLRKVGEDETRRLLNMEAELHNT--- 526
Query: 299 FRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIA 357
+ Q+EAI I++ + + R+G +D P+R I F F GP GK +A
Sbjct: 527 -------VISQNEAIHAIAKAVRKSRSGMKD-----PKRPIGSFIFAGPTGVGKTLLAKQ 574
Query: 358 LAEIIYGGKENFICADLCPQDGEMN------NPPKFYHQVVGGDSVQFRGKTLADYVAWE 411
LA+ ++G + N + D+ + N PP + GG + +
Sbjct: 575 LAKFMFGDENNLVQLDMSEYMEKHNVSRLVGAPPGYIGYEEGGQ------------LTEK 622
Query: 412 LLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ +KP SVV L+ ++KA V N L + ++ G+L D+ GR V N I + ++
Sbjct: 623 IRRKPYSVVLLDEIEKAHPDVWNMLLQIMEEGRLTDNVGRVVDFKNTILILTTNI 677
>gi|417749972|ref|ZP_12398348.1| ATPase family protein associated with various cellular activities
(AAA), partial [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336458455|gb|EGO37428.1| ATPase family protein associated with various cellular activities
(AAA) [Mycobacterium avium subsp. paratuberculosis S397]
Length = 503
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 174 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 228
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 229 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 282
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 283 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 328
>gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|423555991|ref|ZP_17532294.1| chaperone ClpB [Bacillus cereus MC67]
gi|401195694|gb|EJR02644.1| chaperone ClpB [Bacillus cereus MC67]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423509092|ref|ZP_17485623.1| chaperone ClpB [Bacillus cereus HuA2-1]
gi|402457236|gb|EJV89005.1| chaperone ClpB [Bacillus cereus HuA2-1]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|423366983|ref|ZP_17344416.1| chaperone ClpB [Bacillus cereus VD142]
gi|401086766|gb|EJP94987.1| chaperone ClpB [Bacillus cereus VD142]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|229056905|ref|ZP_04196301.1| Chaperone protein clpB 1 [Bacillus cereus AH603]
gi|228720433|gb|EEL72006.1| Chaperone protein clpB 1 [Bacillus cereus AH603]
Length = 866
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|440739028|ref|ZP_20918550.1| chaperone [Pseudomonas fluorescens BRIP34879]
gi|440380400|gb|ELQ16967.1| chaperone [Pseudomonas fluorescens BRIP34879]
Length = 854
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ QDEA+ +S + + R G D + S F F GP GK ++ ALAE
Sbjct: 566 LHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSG----SFMFLGPTGVGKTELCKALAEF 621
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +E + D+ + + PP + GG Y+ + +K
Sbjct: 622 LFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 669
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SV+ L+ V+KA V N L + ++ G+L DS+GR V N + V S+
Sbjct: 670 PYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720
>gi|423677009|ref|ZP_17651948.1| chaperone ClpB [Bacillus cereus VDM062]
gi|401306624|gb|EJS12090.1| chaperone ClpB [Bacillus cereus VDM062]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|350552065|ref|ZP_08921273.1| ATP-dependent chaperone ClpB [Thiorhodospira sibirica ATCC 700588]
gi|349795393|gb|EGZ49193.1| ATP-dependent chaperone ClpB [Thiorhodospira sibirica ATCC 700588]
Length = 1221
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRR-DIWFNFTGPDLCGKRKIAIALA 359
AL+ ++ QDEA+SV+S I + R G D P R + F F GP GK ++ LA
Sbjct: 923 ALSTRVIGQDEAVSVVSHAIRRSRAGLSD-----PNRPNGSFLFLGPTGVGKTELTKTLA 977
Query: 360 EIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELL 413
++ +E + D+ + + PP + GG Y+ +
Sbjct: 978 AFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVR 1025
Query: 414 KKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARIL 473
+KP SV+ L+ ++KA V N L + + G+L D +GR V N + V S+ L
Sbjct: 1026 RKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVIVMTSN-------L 1078
Query: 474 PSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
S++ EE K + +++ P VNR
Sbjct: 1079 GSQLIQEMVGEEHYQAMKQAVMEVVATHFRPEFVNR 1114
>gi|284042115|ref|YP_003392455.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
gi|283946336|gb|ADB49080.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
Length = 892
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ + + R G +D PRR I F F GP GK +++ ALA+
Sbjct: 575 LHERVIGQDEAVQLVADAVIRARAGVKD-----PRRPIGSFIFLGPTGVGKTELSRALAQ 629
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++N + D+ + PP + +G D G L + V +
Sbjct: 630 ALFDSEDNMVRLDMSEYQERHTVSRLVGAPPGY----IGYDE----GGQLTEAVR----R 677
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G++ D+ GR V N + + S+
Sbjct: 678 KPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRTVDFRNTVVIMTSNI 729
>gi|229494287|ref|ZP_04388050.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|453067540|ref|ZP_21970827.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
gi|226183250|dbj|BAH31354.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus erythropolis PR4]
gi|229318649|gb|EEN84507.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|452766831|gb|EME25074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q+EA+ +S+ I + R G +D P+R F F GP GK ++A +LA
Sbjct: 512 LHKRIIGQEEAVKSVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELAKSLAN 566
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 567 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 620
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 621 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 666
>gi|441216366|ref|ZP_20976990.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
gi|440624518|gb|ELQ86380.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
Length = 827
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|326803863|ref|YP_004321681.1| ATP-dependent chaperone protein ClpB [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650751|gb|AEA00934.1| ATP-dependent chaperone protein ClpB [Aerococcus urinae
ACS-120-V-Col10a]
Length = 872
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 305 KIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIY 363
++ QD+A++ ++ T+ + R G +D P R + F F GP GK ++A ALAE ++
Sbjct: 574 RVIGQDQAVNSVTDTVLRSRAGIQD-----PNRPLGSFLFLGPTGVGKTELAKALAEQVF 628
Query: 364 GGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLE 423
++N I D+ + N ++VG S + G + + + P SVV L+
Sbjct: 629 DSEDNMIRIDMSEYMEKAN-----VSRLVGA-SPGYIGYEEGGQLTEAVRRHPYSVVLLD 682
Query: 424 NVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEMKDCKFS 483
++KA V N L + + G+L D GR V N I + S+ D +L + KD S
Sbjct: 683 EIEKAHSDVYNILLQILDDGRLTDGQGRTVDFKNTIIIMTSNIGSD--LLLEDAKDGNTS 740
Query: 484 E---EKIYRAKSRLTQILIEPALVNR 506
E E + K RL +P +NR
Sbjct: 741 EISTEARDKVKERLYGYF-KPEFLNR 765
>gi|322386185|ref|ZP_08059818.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
cristatus ATCC 51100]
gi|417921295|ref|ZP_12564787.1| Clp amino terminal domain protein [Streptococcus cristatus ATCC
51100]
gi|321269765|gb|EFX52692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
cristatus ATCC 51100]
gi|342834455|gb|EGU68724.1| Clp amino terminal domain protein [Streptococcus cristatus ATCC
51100]
Length = 809
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 17/258 (6%)
Query: 269 GSISNQLAQSSSSSCPDLNCQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHE 328
G I L++ S L + D + L + L +++ QD A+S +S+ I + ++G
Sbjct: 477 GDILETLSRLSGIPVQKL-TRTDAKKYLNLEKELHKRVIGQDAAVSAVSRAIRRNQSGIR 535
Query: 329 DHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKF 387
+ +R I F F GP GK ++A ALAE+++ + I D+ KF
Sbjct: 536 -----TGKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALIRFDMS------EYMEKF 584
Query: 388 YHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPD 447
+ G + G + ++ +P SV+ + V+KA + N L + + G+L D
Sbjct: 585 AASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHSDIFNVLLQVLDDGQLTD 644
Query: 448 SYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFSEEKIYRAKSRLTQILIEPAL 503
S GR+V SN I + S+ + D + + +D +F + + + + P
Sbjct: 645 SKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDIRFDQANMEKRILEELKKTYRPEF 704
Query: 504 VNRSSSQKLSASETSEGM 521
+NR + + S ++E M
Sbjct: 705 INRIDEKVVFHSLSAEDM 722
>gi|229132067|ref|ZP_04260930.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
gi|228651467|gb|EEL07439.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|379752482|ref|YP_005341154.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|379759922|ref|YP_005346319.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|387873864|ref|YP_006304168.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|443308784|ref|ZP_21038570.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
gi|378802698|gb|AFC46833.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|378807864|gb|AFC51998.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|386787322|gb|AFJ33441.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|442763900|gb|ELR81899.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|226226990|ref|YP_002761096.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gemmatimonas
aurantiaca T-27]
gi|226090181|dbj|BAH38626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gemmatimonas
aurantiaca T-27]
Length = 835
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 309 QDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAEIIYGGKE 367
QDEAI ++++I + R G +D PRR I F F+GP GK ++A ALA+ ++
Sbjct: 532 QDEAIKALARSIRRSRAGLKD-----PRRPIGSFIFSGPTGVGKTELARALAKFLFADTS 586
Query: 368 NFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVVYLENVDK 427
I D+ KF + G + G + + + +KP SVV L+ ++K
Sbjct: 587 ALIRVDMS------EYMEKFSVSRLIGAPPGYVGYEDSGTLTKAVRRKPYSVVLLDEIEK 640
Query: 428 ADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF----VEDARILPSEMKDCKFS 483
A V N L + + G L D+YGR + N + + S+ + + L KD +
Sbjct: 641 AHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVVIMTSNVGAKDITKGKSLGFATKDSRGD 700
Query: 484 EEKIY-RAKSRLTQILIEPALVNR 506
E+I + K + ++ P +NR
Sbjct: 701 FERIAEKVKEEMGRVF-NPEFLNR 723
>gi|163939070|ref|YP_001643954.1| ATPase [Bacillus weihenstephanensis KBAB4]
gi|423515931|ref|ZP_17492412.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|163861267|gb|ABY42326.1| ATPase AAA-2 domain protein [Bacillus weihenstephanensis KBAB4]
gi|401166393|gb|EJQ73698.1| chaperone ClpB [Bacillus cereus HuA2-4]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
gi|13883563|gb|AAK48060.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|379706161|ref|YP_005204620.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
gi|374682860|gb|AEZ63149.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 808
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + TL + L +++ QD AIS IS+ I + + G + +R I F F GP
Sbjct: 494 TQADSKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIR-----TGKRPIASFMFLGP 548
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 549 TGVGKTELAKALAELLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 602
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 603 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNL 662
>gi|340359190|ref|ZP_08681685.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
gi|339885200|gb|EGQ74938.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
Length = 853
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+AI +S++I + R G +D P+R F F GP GK ++A ALAE
Sbjct: 510 LHKRIIGQDKAIQALSKSIRRTRAGLKD-----PKRPGGSFIFAGPTGVGKTELAKALAE 564
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++ +++ + D+ + E + + + G + G + ++ +KP SVV
Sbjct: 565 FLFDDEDSLVQLDMS-EFAEKHTVSRLF-----GAPPGYVGYDEGGQLTEKVRRKPFSVV 618
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ V+KA + NSL + ++ G L D+ GREV N + + ++
Sbjct: 619 LFDEVEKAHPDIFNSLLQILEDGHLSDAQGREVDFKNTVIIMTTNL 664
>gi|297560333|ref|YP_003679307.1| ATPase AAA [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296844781|gb|ADH66801.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 830
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA++ +S+ I + R G D P R + F F GP GK ++A ALAE
Sbjct: 528 LHERVIGQDEAVTAVSEAIRRSRAGLGD-----PDRPVGSFLFLGPTGVGKTELARALAE 582
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G +++ + D+ + E + + G F G A + + + P SV+
Sbjct: 583 ALFGSEDSMVRIDMS-EFQERHTASRLT-----GAPPGFVGYEEAGQLTEAVRRHPYSVL 636
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILPSEM--- 477
L+ V+KA V N L + + G+L D GR V N + + S+ +A + M
Sbjct: 637 LLDEVEKAHPDVFNLLLQLLDDGRLTDGQGRTVDFRNTVVIMTSNLGSEAITGGAPMGFT 696
Query: 478 KDCKFSEEKIYRAKSRLTQILIEPALVNR 506
D + + R RL + P +NR
Sbjct: 697 ADGQMDPDTEQRVMRRLREEF-RPEFINR 724
>gi|171777589|ref|ZP_02919277.1| hypothetical protein STRINF_00112 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283198|gb|EDT48622.1| ATPase family associated with various cellular activities (AAA)
[Streptococcus infantarius subsp. infantarius ATCC
BAA-102]
Length = 813
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + TL + L +++ QD AIS IS+ I + + G + +R I F F GP
Sbjct: 499 TQADSKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGIR-----TGKRPIASFMFLGP 553
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 554 TGVGKTELAKALAELLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 607
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ KP SV+ + V+KA + N L + + G L DS GR+V SN I + S+
Sbjct: 608 ELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNL 667
>gi|447915151|ref|YP_007395719.1| chaperone [Pseudomonas poae RE*1-1-14]
gi|445199014|gb|AGE24223.1| chaperone [Pseudomonas poae RE*1-1-14]
Length = 854
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAEI 361
L +++ QDEA+ +S + + R G D + S F F GP GK ++ ALAE
Sbjct: 566 LHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSG----SFMFLGPTGVGKTELCKALAEF 621
Query: 362 IYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKK 415
++ +E + D+ + + PP + GG Y+ + +K
Sbjct: 622 LFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG------------YLTEAVRRK 669
Query: 416 PLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
P SV+ L+ V+KA V N L + ++ G+L DS+GR V N + V S+
Sbjct: 670 PYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720
>gi|423609680|ref|ZP_17585541.1| chaperone ClpB [Bacillus cereus VD107]
gi|401250695|gb|EJR56987.1| chaperone ClpB [Bacillus cereus VD107]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + GG L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ--------LTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium
africanum GM041182]
gi|339332951|emb|CCC28678.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium africanum GM041182]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|300857273|ref|YP_003782257.1| ATPase [Clostridium ljungdahlii DSM 13528]
gi|300437388|gb|ADK17155.1| predicted ATPase with chaperone activity [Clostridium ljungdahlii
DSM 13528]
Length = 813
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ IS+ + + R G +D P+R I F F GP GK +++ ALAE
Sbjct: 509 LHKRVVGQDEAVKSISKAVRRARVGLKD-----PKRPIGSFIFLGPTGVGKTELSKALAE 563
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G + N I D+ + + +PP + VG D G L + V +
Sbjct: 564 AMFGDENNMIRIDMSEYMEKHTVSRLIGSPPGY----VGYDE----GGQLTEKVR----R 611
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
P SVV + ++KA V N L + ++ G+L D G+ ++ N I + S+
Sbjct: 612 NPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSN 662
>gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298496869|gb|EFI32163.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis AF2122/97]
gi|57117131|ref|YP_177995.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|121639516|ref|YP_979740.1| ATP-dependent Clp protease ATP-binding subunit clpC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148663461|ref|YP_001284984.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148824802|ref|YP_001289556.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|167968197|ref|ZP_02550474.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis H37Ra]
gi|224992013|ref|YP_002646702.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800637|ref|YP_003033638.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289445190|ref|ZP_06434934.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289747433|ref|ZP_06506811.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|294993716|ref|ZP_06799407.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis 210]
gi|297636272|ref|ZP_06954052.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN 4207]
gi|297733266|ref|ZP_06962384.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN R506]
gi|306791193|ref|ZP_07429495.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|307086394|ref|ZP_07495507.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|313660596|ref|ZP_07817476.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN V2475]
gi|340628561|ref|YP_004747013.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|375297863|ref|YP_005102130.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|378773377|ref|YP_005173110.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|383309326|ref|YP_005362137.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|385992823|ref|YP_005911121.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|385996461|ref|YP_005914759.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|386000382|ref|YP_005918681.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|392388189|ref|YP_005309818.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|392434075|ref|YP_006475119.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|397675551|ref|YP_006517086.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|422814849|ref|ZP_16863067.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|424806159|ref|ZP_18231590.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|424945484|ref|ZP_18361180.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|433628738|ref|YP_007262367.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|433632691|ref|YP_007266319.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|433636704|ref|YP_007270331.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|433643788|ref|YP_007289547.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|449065710|ref|YP_007432793.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
gi|61221148|sp|P0A522.1|CLPC_MYCTU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|61221149|sp|P0A523.1|CLPC_MYCBO RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|31620370|emb|CAD95813.1| PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPC
[Mycobacterium bovis AF2122/97]
gi|121495164|emb|CAL73650.1| Probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148507613|gb|ABQ75422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148723329|gb|ABR07954.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|224775128|dbj|BAH27934.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253322140|gb|ACT26743.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289418148|gb|EFD15349.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289687961|gb|EFD55449.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|308340222|gb|EFP29073.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|308364160|gb|EFP53011.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|323717705|gb|EGB26905.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|326905435|gb|EGE52368.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|328460368|gb|AEB05791.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|339296415|gb|AEJ48526.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|339300016|gb|AEJ52126.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|340006751|emb|CCC45939.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|341603537|emb|CCC66218.1| probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221429|gb|AEN02060.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|356595698|gb|AET20927.1| Putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|358229999|dbj|GAA43491.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|378546740|emb|CCE39019.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|379029983|dbj|BAL67716.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|380723279|gb|AFE18388.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|392055484|gb|AFM51042.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|395140456|gb|AFN51615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|432156344|emb|CCK53602.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|432160336|emb|CCK57659.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|432164284|emb|CCK61736.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|432168297|emb|CCK65831.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|440583104|emb|CCG13507.1| putative ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC1
[Mycobacterium tuberculosis 7199-99]
gi|444897153|emb|CCP46419.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|449034218|gb|AGE69645.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|357236003|ref|ZP_09123346.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
gi|356883985|gb|EHI74185.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
Length = 813
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 288 CQFDLSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGP 346
Q D + L R L +++ Q++A+S +S+ I + R+G + +R I F F GP
Sbjct: 499 TQADNQRYLNLERELHKRVIGQEDAVSAVSRAIRRNRSGIR-----TGKRPIGSFMFLGP 553
Query: 347 DLCGKRKIAIALAEIIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLAD 406
GK ++A ALAE+++ + I D+ KF + G + G
Sbjct: 554 TGVGKTELAKALAELLFDDESALIRFDMS------EYMEKFAASRLNGAPPGYVGYEEGG 607
Query: 407 YVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++ +KP SV+ + V+KA + N L + + G L DS GR+V+ SN I + S+
Sbjct: 608 ELTEKVRQKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRQVNFSNTIIIMTSNL 667
>gi|167761662|ref|ZP_02433789.1| hypothetical protein CLOSCI_04074 [Clostridium scindens ATCC 35704]
gi|167660805|gb|EDS04935.1| ATPase family associated with various cellular activities (AAA)
[Clostridium scindens ATCC 35704]
Length = 812
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L +++ Q+EA+S +++ I + R G +D P+R I F F GP GK +++
Sbjct: 503 LEQTLHKRVVGQEEAVSAVAKAIKRGRVGLKD-----PKRPIGSFLFLGPTGVGKTELSK 557
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ I D+ + + +PP + VG D G L++ V
Sbjct: 558 ALAEALFGNEDAMIRVDMSEYMEKHSVAKMIGSPPGY----VGHDD----GGQLSEQVR- 608
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+ P SV+ + ++KA V N L + + G + DS GR+V N + + S+ A
Sbjct: 609 ---RHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAGAQA 665
Query: 471 RILPSEM 477
I P ++
Sbjct: 666 IIDPKKL 672
>gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobacterium leprae TN]
gi|221229510|ref|YP_002502926.1| ATP-dependent Clp protease [Mycobacterium leprae Br4923]
gi|13432105|sp|P24428.2|CLPC_MYCLE RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|13092579|emb|CAC29743.1| putative ATP-dependent Clp protease [Mycobacterium leprae]
gi|219932617|emb|CAR70328.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|452990568|emb|CCQ98240.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium ultunense Esp]
Length = 812
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L EK+ Q++A+ +S + + R G +D P++ + F F GP GK +A ALAE
Sbjct: 507 LHEKVIGQNQAVEAVSNAVRRARVGLKD-----PKKPVGTFIFVGPTGVGKTYLAKALAE 561
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G +E+ I D+ + + +PP + VG D G L + V +
Sbjct: 562 TLFGDEESMIRIDMSEYMEKHSVSRLVGSPPGY----VGYDE----GGQLTEAVR----R 609
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
KP SV+ + ++KA V N L + + G+L DS GR V N + + S+
Sbjct: 610 KPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTVIIMTSN 660
>gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS]
gi|126237506|gb|ABO00907.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308371394|ref|ZP_07424826.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308372592|ref|ZP_07429192.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308373956|ref|ZP_07434280.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308374925|ref|ZP_07442106.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308376170|ref|ZP_07437892.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308378380|ref|ZP_07482390.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308379552|ref|ZP_07486731.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308380740|ref|ZP_07490948.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
gi|308213724|gb|EFO73123.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308328891|gb|EFP17742.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308332729|gb|EFP21580.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308343544|gb|EFP32395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308348011|gb|EFP36862.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308351952|gb|EFP40803.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308352738|gb|EFP41589.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308356587|gb|EFP45438.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308360544|gb|EFP49395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
Length = 827
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|296386957|ref|ZP_06876456.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAb1]
gi|416874981|ref|ZP_11918474.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 152504]
gi|334842534|gb|EGM21140.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 152504]
Length = 932
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 242 NEPKEPISKDLTERSQELSGCCSATVN-GSISNQLAQSSSSSCPDLNCQFDLSNWKTLFR 300
E KE + + +TER Q+ G + V I+ +++ + +L + + +
Sbjct: 531 QERKEHLEQ-ITERWQQTQGSKTEEVRVEDIAEIISKLTGIPVTELTAE-EREKLLQMEE 588
Query: 301 ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIWFNFTGPDLCGKRKIAIALAE 360
L +++ Q EAI+ +S + R G G+ P F F GP GK ++A ALAE
Sbjct: 589 RLHQRVIGQQEAITAVSDAVRLARAGL--RQGSRP--IATFLFLGPTGVGKTELAKALAE 644
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
+++G ++ I D+ + PP + VG D G L + V +
Sbjct: 645 VVFGDEDAMIRIDMSEYMERHAVSRLIGAPPGY----VGYDE----GGQLTERVR----R 692
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
+P SV+ L+ ++KA V N L + G+L D GR V +N I + S+ + +
Sbjct: 693 RPYSVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKN 752
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
++ + EK+ R + P +NR
Sbjct: 753 AQAGEFALPPEKLKRELMTTLRGHFRPEFLNR 784
>gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897996|gb|EFG77576.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 844
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|423663845|ref|ZP_17639014.1| chaperone ClpB [Bacillus cereus VDM022]
gi|401295745|gb|EJS01369.1| chaperone ClpB [Bacillus cereus VDM022]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxanivorans CB1190]
gi|326954518|gb|AEA28215.1| ATPase AAA-2 domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +SQ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 511 LHKRIIGQEDAVKAVSQAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 565
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ ++ + G + G + ++ +KP SVV
Sbjct: 566 FLFGEDDALIQIDM----GEFHD--RYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 619
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA V N+L + ++ G+L D GR V N + + S+
Sbjct: 620 LFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNL 665
>gi|108801719|ref|YP_641916.1| ATPase [Mycobacterium sp. MCS]
gi|119870870|ref|YP_940822.1| ATPase [Mycobacterium sp. KMS]
gi|108772138|gb|ABG10860.1| ATPase AAA-2 [Mycobacterium sp. MCS]
gi|119696959|gb|ABL94032.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|229010560|ref|ZP_04167762.1| Chaperone protein clpB 1 [Bacillus mycoides DSM 2048]
gi|228750758|gb|EEM00582.1| Chaperone protein clpB 1 [Bacillus mycoides DSM 2048]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
>gi|118466434|ref|YP_879836.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
gi|254773513|ref|ZP_05215029.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118167721|gb|ABK68618.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
Length = 822
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 493 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 547
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 548 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 601
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 602 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 647
>gi|104773532|ref|YP_618512.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|418035229|ref|ZP_12673687.1| hypothetical protein LDBUL1519_00387 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103422613|emb|CAI97218.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|354690647|gb|EHE90591.1| hypothetical protein LDBUL1519_00387 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 819
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++ I + R+G +D + R I F F GP GK ++A A+AE
Sbjct: 510 LHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLFLGPTGVGKTELAKAVAE 564
Query: 361 IIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
++G ++N I D+ D E ++ + G + + G ++ ++ + P SV
Sbjct: 565 AVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGYEEGGQLSNKVREHPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-----SFVEDARI-- 472
V + V+KA+ + N L + + G + DS GR+V N I + S S D+ +
Sbjct: 618 VLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIMTSNLGSRSLEADSHVGF 677
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
S+ K EK+ RA T+ P +NR
Sbjct: 678 SASQEDQGKLIAEKVTRA----TKDFFRPEFLNR 707
>gi|404424419|ref|ZP_11006001.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403651405|gb|EJZ06539.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 842
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|375092863|ref|ZP_09739128.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
gi|374653596|gb|EHR48429.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
Length = 889
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ +++ I + R+G +D PRR I F F GP GK ++A LA
Sbjct: 575 LHERVVGQDEAVQLVADAIIRARSGIKD-----PRRPIGSFVFLGPTGVGKTELAKTLAA 629
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ +N + D+ + PP + VG + G L + V +
Sbjct: 630 ALFDTADNMVRLDMSEYQERHTVSRLVGAPPGY----VGFEE----GGQLTEAVR----R 677
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SVV + ++KA V N+L + + G+L D+ GR V N + + S+
Sbjct: 678 KPYSVVLFDEIEKAHTDVFNTLLQVLDDGRLTDAQGRTVDFRNTVIIMTSNI 729
>gi|319948880|ref|ZP_08022993.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
gi|319437482|gb|EFV92489.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
Length = 883
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++AI +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 516 LHKRIIGQEDAIKAVSRAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 570
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 571 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 624
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 625 LFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNL 670
>gi|305680627|ref|ZP_07403435.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
gi|305660158|gb|EFM49657.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
Length = 890
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 585
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 685
>gi|118472509|ref|YP_890312.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399990311|ref|YP_006570661.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
gi|118173796|gb|ABK74692.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399234873|gb|AFP42366.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|134298058|ref|YP_001111554.1| ATPase [Desulfotomaculum reducens MI-1]
gi|134050758|gb|ABO48729.1| ATPase AAA-2 domain protein [Desulfotomaculum reducens MI-1]
Length = 812
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 24/175 (13%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L L ++ QD+A+ +S+ + + R G +D P+R + F F GP GK ++A
Sbjct: 506 LEEVLHRRVVGQDDAVKAVSRAVRRARAGLKD-----PKRPVGSFIFLGPTGVGKTELAR 560
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
ALAE ++G ++ + D+ + + PP + VG D G L + V
Sbjct: 561 ALAESLFGDEDALVRIDMSEYMEKHAVSRLVGAPPGY----VGYDE----GGQLTEAVR- 611
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASS 465
+KP SVV L+ ++KA V N L + ++ G+L DS GR V N + + S+
Sbjct: 612 ---RKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSRGRVVDFRNTVIIMTSN 663
>gi|116513529|ref|YP_812435.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|418029954|ref|ZP_12668471.1| hypothetical protein LDBUL1632_01265 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|116092844|gb|ABJ57997.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|354688417|gb|EHE88456.1| hypothetical protein LDBUL1632_01265 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 819
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QD+A+ ++ I + R+G +D + R I F F GP GK ++A A+AE
Sbjct: 510 LHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLFLGPTGVGKTELAKAVAE 564
Query: 361 IIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSV 419
++G ++N I D+ D E ++ + G + + G ++ ++ + P SV
Sbjct: 565 AVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGYEEGGQLSNKVREHPYSV 617
Query: 420 VYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS-----SFVEDARI-- 472
V + V+KA+ + N L + + G + DS GR+V N I + S S D+ +
Sbjct: 618 VLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIMTSNLGSRSLEADSHVGF 677
Query: 473 LPSEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
S+ K EK+ RA T+ P +NR
Sbjct: 678 SASQEDQGKLIAEKVTRA----TKDFFRPEFLNR 707
>gi|359421709|ref|ZP_09213621.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
gi|358242425|dbj|GAB11690.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHPEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|337755940|ref|YP_004648451.1| ClpB protein [Francisella sp. TX077308]
gi|336447545|gb|AEI36851.1| ClpB protein [Francisella sp. TX077308]
Length = 860
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QD+AI +S + + R+G D P R I F F GP GK ++ ALAE
Sbjct: 568 LHKRVIGQDQAIKAVSNAVRRSRSGLSD-----PNRPIGSFMFLGPTGVGKTELTKALAE 622
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ + D+ + + PP + GG Y+ + +
Sbjct: 623 FLFDDQDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGG------------YLTEHVRR 670
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDARILP 474
KP SV+ L+ V+KA V N L + + G+L D GR V N + V S+
Sbjct: 671 KPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHK---I 727
Query: 475 SEMKDCKFSEEKIYRAKSRLTQILIEPALVNR 506
EM+D + E + A + P VNR
Sbjct: 728 QEMQDQDY--ETVKSAVMEMVLSHFRPEFVNR 757
>gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit
[Amycolicicoccus subflavus DQS3-9A1]
Length = 851
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +++ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 512 LHKRIIGQEDAVRAVAKAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 566
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 567 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 620
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 621 LFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 666
>gi|332295625|ref|YP_004437548.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178728|gb|AEE14417.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 800
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 35/225 (15%)
Query: 292 LSNWKTLFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCG 350
L+N +++ L ++I QDEA+ +S+ I + R+G +D PRR + F F GP G
Sbjct: 499 LTNMESI---LHKRIIGQDEAVVAVSEAIRRSRSGLKD-----PRRPVGSFLFLGPTGVG 550
Query: 351 KRKIAIALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTL 404
K +++ ALA ++ + + D+ + + PP + GG +
Sbjct: 551 KTELSKALAAFLFKDENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEV----- 605
Query: 405 ADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTAS 464
+ ++P SV+ L+ ++KA V N L + + G+L D GR + N + + S
Sbjct: 606 -------IRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGKGRTIDFRNTVIIMTS 658
Query: 465 SFVEDARILPSEMKDCKFSEEKIYRAKSRLTQIL---IEPALVNR 506
+ D +L S ++D E + +AK+R+ +L P +NR
Sbjct: 659 NLGSDI-LLNSNVED----EREFEKAKNRVLSLLNSTFRPEFLNR 698
>gi|315446238|ref|YP_004079117.1| chaperone ATPase [Mycobacterium gilvum Spyr1]
gi|315264541|gb|ADU01283.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
gilvum Spyr1]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|300812110|ref|ZP_07092558.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496949|gb|EFK32023.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 819
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 32/262 (12%)
Query: 288 CQFDLSNWKTLFR---ALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNF 343
Q S K L R L E++ QD+A+ ++ I + R+G +D + R I F F
Sbjct: 493 TQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDEN-----RPIGSFLF 547
Query: 344 TGPDLCGKRKIAIALAEIIYGGKENFICADLCP-QDGEMNNPPKFYHQVVGGDSVQFRGK 402
GP GK ++A A+AE ++G ++N I D+ D E ++ + G + + G
Sbjct: 548 LGPTGVGKTELAKAVAEAVFGSEDNIIRVDMSEYMDRESSSK-------LIGSAPGYVGY 600
Query: 403 TLADYVAWELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVT 462
++ ++ + P SVV + V+KA+ + N L + + G + DS GR+V N I +
Sbjct: 601 EEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIM 660
Query: 463 ASSFVEDARIL---------PSEMKDCKFSEEKIYRAKSRLTQILIEPALVNRSSSQKLS 513
S+ +R L S+ K EK+ RA T+ P +NR + +
Sbjct: 661 TSNL--GSRSLEAGSHVGFSASQEDQGKLIAEKVTRA----TKDFFRPEFLNRIDEKIVF 714
Query: 514 ASETSEGMSHQKLLNKRKLIGR 535
++ + L RKL+ R
Sbjct: 715 KPLEAKQLREIVTLLTRKLVKR 736
>gi|302555193|ref|ZP_07307535.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302472811|gb|EFL35904.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 842
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L +++ QDEA+ V+S + + R G A+P R I F F GP GK ++A ALAE
Sbjct: 537 LHQRVVGQDEAVRVVSDAVLRSRAGL-----ANPDRPIGSFLFLGPTGVGKTELARALAE 591
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++G ++ + D+ + PP + G A + + +
Sbjct: 592 ALFGSEDRMVRLDMSEYQERHTVSRLIGAPPGYV------------GHEEAGQLTEVVRR 639
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
P S++ L+ V+KA V N L + + G+L DS GR V +N + V S+ +A
Sbjct: 640 HPYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEA 695
>gi|225022124|ref|ZP_03711316.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
gi|224945057|gb|EEG26266.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
Length = 890
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D PRR F F GP GK +++ ALA
Sbjct: 531 LHKRIIGQEDAVKAVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKALAN 585
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 586 FLFGEDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 639
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 640 LFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVDFKNTVLIFTSNL 685
>gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PYR-GCK]
gi|145214508|gb|ABP43912.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK]
Length = 847
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|433446675|ref|ZP_20410567.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
gi|432000182|gb|ELK21082.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
Length = 860
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L E++ QDEA+ ++S + + R G +D P R I F F GP GK ++A ALAE
Sbjct: 566 LHERVIGQDEAVELVSDAVLRARAGMKD-----PNRPIGSFLFLGPTGVGKTELAKALAE 620
Query: 361 IIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLK 414
++ ++ I D+ + + PP + VG + G L + V +
Sbjct: 621 ALFDSEQQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR----R 668
Query: 415 KPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+
Sbjct: 669 KPYSVILLDEIEKAHPEVFNILLQMLDDGRMTDSQGRTVDFKNTVVIMTSNI 720
>gi|392418483|ref|YP_006455088.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
gi|390618259|gb|AFM19409.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
Length = 847
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I Q++A+ +S+ I + R G +D P+R F F GP GK +++ ALA
Sbjct: 514 LHKRIIGQEDAVKAVSKAIRRTRAGLKD-----PKRPSGSFIFAGPSGVGKTELSKALAN 568
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 569 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVV 622
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + NSL + ++ G+L D GR V N + + S+
Sbjct: 623 LFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNL 668
>gi|376291130|ref|YP_005163377.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372104526|gb|AEX68123.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
Length = 878
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 302 LTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAIALAE 360
L ++I QD+A+ +S+ I + R G +D PRR F F GP GK +++ +LA
Sbjct: 527 LHKRIIGQDDAVKSVSRAIRRTRAGLKD-----PRRPSGSFIFAGPSGVGKTELSKSLAN 581
Query: 361 IIYGGKENFICADLCPQDGEMNNPPKFYHQVVGGDSVQFRGKTLADYVAWELLKKPLSVV 420
++G + I D+ GE ++ +F + G + G + ++ +KP SVV
Sbjct: 582 FLFGDDDALIQIDM----GEFHD--RFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVV 635
Query: 421 YLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSF 466
+ ++KA + N+L + ++ G+L D GR V N + + S+
Sbjct: 636 LFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNL 681
>gi|423392449|ref|ZP_17369675.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
gi|401634586|gb|EJS52351.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
Length = 866
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 298 LFRALTEKIDWQDEAISVISQTIAQRRTGHEDHHGASPRRDIW-FNFTGPDLCGKRKIAI 356
L + L+E++ Q+EA+S++S + + R G +D P R I F F GP GK ++A
Sbjct: 568 LEQILSERVIGQEEAVSLVSDAVLRARAGIKD-----PNRPIGSFIFLGPTGVGKTELAK 622
Query: 357 ALAEIIYGGKENFICADLCPQDGE------MNNPPKFYHQVVGGDSVQFRGKTLADYVAW 410
LA+ ++ +E I D+ + + PP + VG + G L + V
Sbjct: 623 TLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGY----VGYEE----GGQLTEAVR- 673
Query: 411 ELLKKPLSVVYLENVDKADVHVQNSLSKAIQTGKLPDSYGREVSVSNAIFVTASSFVEDA 470
+KP SV+ L+ ++KA V N L + + G++ DS GR V N + + S+ + A
Sbjct: 674 ---RKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSN-IGSA 729
Query: 471 RILPSEMKDCKFSEE 485
+L +D EE
Sbjct: 730 HLLEGLEEDGSIKEE 744
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,895,280,662
Number of Sequences: 23463169
Number of extensions: 447665887
Number of successful extensions: 1083831
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4611
Number of HSP's successfully gapped in prelim test: 7112
Number of HSP's that attempted gapping in prelim test: 1057662
Number of HSP's gapped (non-prelim): 18878
length of query: 710
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 560
effective length of database: 8,839,720,017
effective search space: 4950243209520
effective search space used: 4950243209520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 81 (35.8 bits)