Citrus Sinensis ID: 005190
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 709 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LW26 | 701 | Acyltransferase-like prot | no | no | 0.861 | 0.871 | 0.550 | 0.0 | |
| Q9ZVN2 | 704 | Acyltransferase-like prot | no | no | 0.902 | 0.909 | 0.509 | 0.0 | |
| Q0VCR6 | 334 | Transmembrane protein 68 | yes | no | 0.183 | 0.389 | 0.266 | 0.0004 |
| >sp|Q9LW26|Y3684_ARATH Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/619 (55%), Positives = 456/619 (73%), Gaps = 8/619 (1%)
Query: 95 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR 154
K L D+ +EA + + GGGPPRWFSPLECG+ +SPLLL+LPGIDG GLGLIR H++
Sbjct: 85 KRLSDFLEEAREFV--GDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKK 142
Query: 155 LGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214
LG+IFDIWCLHIPV DRT LVKL+E TV+SE+ R P RP+YLVGES+GAC+AL VAA
Sbjct: 143 LGEIFDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAA 202
Query: 215 RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL--MTGDPLKMAMD 272
RNP+IDL LILVNPAT N ++Q +L ++P + T+L GDPL +D
Sbjct: 203 RNPNIDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLD 262
Query: 273 NVAKRLSLQ---PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLH 329
++ S+Q + +D++A+S+ LP L+ + PK+TLLWK+E+LK A A NS ++
Sbjct: 263 ALSNEFSVQRMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIY 322
Query: 330 AVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389
+V+A+ L+L SG+D + +E+ +R S L KC R +G F LLEDGVDL TIIK
Sbjct: 323 SVRAETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCT 382
Query: 390 SYYRRGRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSE 449
+YRRG++HD+++D++ PT+ E + +D R + +SPVMLSTL +G +VR L G+PSE
Sbjct: 383 CFYRRGKSHDHITDYIMPTTFELKQQVDDHRLLMDGTSPVMLSTLEDGTVVRSLEGLPSE 442
Query: 450 GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIM 509
GPVL+VGYH +LG ++ ++ + M E NI LRGLAHPM+ FK+ + L D +D +IM
Sbjct: 443 GPVLYVGYHMILGFELAPMVIQLMTERNIHLRGLAHPML-FKNLQDSLVDTKMFDKYKIM 501
Query: 510 GAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIV 569
G VPVS N+YKL+ K+HVLLYPGGVREALHRKGEEYKLFWPE SEFVR+A+ FGAKIV
Sbjct: 502 GGVPVSHFNIYKLLREKAHVLLYPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKIV 561
Query: 570 PFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVP 629
PFG VGEDD+ +IVLD NDQ IP K +E+ T A +R + E+ NQ+ + P VP
Sbjct: 562 PFGVVGEDDICEIVLDSNDQRNIPILKDLMEKATKDAGNIREGDESELGNQECYFPGLVP 621
Query: 630 KVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNIL 689
K+PGRFY+YFGKPIET G+++EL+D+EKA ELYL++KSEVE+C+ YLK KRE+DPYR++L
Sbjct: 622 KIPGRFYYYFGKPIETAGKEKELKDKEKAQELYLQVKSEVEQCIDYLKVKRESDPYRHLL 681
Query: 690 PRLIYQATHGFTSQVPTFE 708
PR++YQA+HG++S++PTF+
Sbjct: 682 PRMLYQASHGWSSEIPTFD 700
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|Q9ZVN2|Y1457_ARATH Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/653 (50%), Positives = 457/653 (69%), Gaps = 13/653 (1%)
Query: 64 KKSSELVEDEAETKQRVNVREYSEEESEGNG-KSLKDYFDEAEDMIKSSSGGGPPRWFSP 122
+K + V + ++K+++ E +G G KS+KDYF A++++K+ GGPPRWFSP
Sbjct: 58 QKGANEVNGKGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKAD--GGPPRWFSP 115
Query: 123 LECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVE 182
++CG D+P LLFLPG+DG G+GL+ H+ LGK F + CLHIPV DRT F GL+K+VE
Sbjct: 116 VDCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVE 175
Query: 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP 242
+R E P +P+YLVG+S G C+ALAVAARN +DLVLILVNPATSF++S LQ +P
Sbjct: 176 DVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLP 235
Query: 243 LLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLA 302
+LE++P ++ + LS + GDP+KMA + +L I+ L Q L + LP+L+
Sbjct: 236 ILEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLT--KTMLPLLS 293
Query: 303 D---ILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359
+ I+P+ETLLWK++LL++ AYANSR+HAV+A++LVL SGKD ++PSQEE +RL L
Sbjct: 294 ELGGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLL 353
Query: 360 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFN-KICED 418
C R F +GH LLLED + L+T+IKG YRR +D VSDF+PP+ E + E
Sbjct: 354 KNCSVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEV 413
Query: 419 FRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNI 478
++R V ST+ +GKIV+GL+G+P +GPVL VGYH L+GL++ + F+ E NI
Sbjct: 414 LGFLRNAVGSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSEAFIKEKNI 473
Query: 479 LLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVRE 538
L RG+AHP++Y + D D +++ GA PV+ NL+KL+ SKSHVLL+PGG RE
Sbjct: 474 LFRGMAHPVLYSDNDPAKAFDYG--DWIKVFGAYPVTATNLFKLLDSKSHVLLFPGGARE 531
Query: 539 ALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQ 598
ALH +GE+YKL WPE EFVRMA FGA IVPFG VGEDD+A++VLDYND MKIP
Sbjct: 532 ALHNRGEQYKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLMKIPILNDY 591
Query: 599 IEELT--VTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDRE 656
I E+T +LR +++GEVANQ +++P +PKVPGRFY+ FGKPIETKGR ++D+E
Sbjct: 592 ITEVTRDTKQFKLREESEGEVANQPLYLPGLIPKVPGRFYYLFGKPIETKGRPELVKDKE 651
Query: 657 KAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFEP 709
+A+++YLE+K+EVE +AYL +KRE DPYR++L RL Y TH + VP+FEP
Sbjct: 652 EANQVYLEVKAEVENSIAYLLKKREEDPYRSVLDRLNYSLTHTTATHVPSFEP 704
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q0VCR6|TMM68_BOVIN Transmembrane protein 68 OS=Bos taurus GN=TMEM68 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 432 STLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFK 491
+ + +G V G+ IP EGP L + YH + +D + + I R +A +F
Sbjct: 104 AAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVAD---HFV 160
Query: 492 SKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW 551
K G S L + + A+ +++ S + + PGGVREAL E Y + W
Sbjct: 161 FKIPGFSLL-----LDVFCAIHGPREKCVEILQSGHLLAISPGGVREAL-MSDETYNIVW 214
Query: 552 PESSEFVRMATTFGAKIVP 570
F ++A I+P
Sbjct: 215 GNRKGFAQVAIDAKVPIIP 233
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Bos taurus (taxid: 9913) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 709 | ||||||
| 225451551 | 693 | PREDICTED: acyltransferase-like protein | 0.976 | 0.998 | 0.634 | 0.0 | |
| 359488450 | 689 | PREDICTED: acyltransferase-like protein | 0.970 | 0.998 | 0.608 | 0.0 | |
| 296082298 | 629 | unnamed protein product [Vitis vinifera] | 0.863 | 0.972 | 0.695 | 0.0 | |
| 357508295 | 697 | Acyltransferase-like protein [Medicago t | 0.981 | 0.998 | 0.621 | 0.0 | |
| 255543629 | 718 | catalytic, putative [Ricinus communis] g | 0.991 | 0.979 | 0.617 | 0.0 | |
| 224060307 | 720 | predicted protein [Populus trichocarpa] | 0.994 | 0.979 | 0.616 | 0.0 | |
| 449464236 | 719 | PREDICTED: acyltransferase-like protein | 0.983 | 0.969 | 0.584 | 0.0 | |
| 356571611 | 692 | PREDICTED: acyltransferase-like protein | 0.967 | 0.991 | 0.612 | 0.0 | |
| 224060309 | 643 | predicted protein [Populus trichocarpa] | 0.867 | 0.956 | 0.649 | 0.0 | |
| 357508285 | 671 | Acyltransferase-like protein [Medicago t | 0.937 | 0.991 | 0.576 | 0.0 |
| >gi|225451551|ref|XP_002274130.1| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/708 (63%), Positives = 542/708 (76%), Gaps = 16/708 (2%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
MA GAC + P+F R + S + + N +VS R SA V TE TP
Sbjct: 1 MAATGACFIAGGFLPMFGRDMKSIAGGLRTN-----FSVSI-RPSA----VFTEQTPAPG 50
Query: 61 FVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPPRWF 120
E+ + + + + + + ++ E +SLKDYF++++D+I+S GGPPRWF
Sbjct: 51 VTERGRFKKMSEADMISKHFDNSDVAKLEQ----RSLKDYFEQSKDLIRSD--GGPPRWF 104
Query: 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKL 180
SPLECGS SPLLLFLPGIDGVGLGLI HQRLGK+FDIWCLHIPV+DRT+FT LVKL
Sbjct: 105 SPLECGSRLDSSPLLLFLPGIDGVGLGLILHHQRLGKLFDIWCLHIPVEDRTTFTELVKL 164
Query: 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240
VE TVRSE+ RSP +P+YLVGESLG C+ALAVAARNPDIDL LIL NPATSF+KS LQS
Sbjct: 165 VERTVRSENYRSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFSKSPLQSL 224
Query: 241 IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPV 300
+PLL L+P ++ L LSL+TGDPL+MA+ N K L LQ + +L Q LVAL SYL V
Sbjct: 225 MPLLSLMPDKLNFSLPFILSLITGDPLRMAIANAEKGLPLQQRVGELPQGLVALPSYLSV 284
Query: 301 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360
L ILP+ETLLWK+++L++ASA+ANSRLHAVKA++L+L SGKD+L+ SQEE ERL AL
Sbjct: 285 LFGILPRETLLWKLKMLRSASAFANSRLHAVKAEILILSSGKDKLLSSQEECERLCHALP 344
Query: 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFR 420
CE R F GHFL LEDGVDLVTIIKG S+YRR + DY+ D++PPT SEF + E R
Sbjct: 345 NCEIRRFTDSGHFLFLEDGVDLVTIIKGVSFYRRAKYLDYILDYIPPTPSEFKNVAEPIR 404
Query: 421 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 480
W ++ PVMLSTL +GKIV+GL+GIPSEGP LFVGYH LLG++ + L+ +FM E NILL
Sbjct: 405 WFNSITCPVMLSTLEDGKIVKGLAGIPSEGPTLFVGYHMLLGIETIPLVLQFMDERNILL 464
Query: 481 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 540
RG+AHPM++ +S G L DLS +D +R++GAVPVSG N YKLMSSKSH LLYPGGVREA+
Sbjct: 465 RGIAHPMLFKRSSGGSLPDLSRFDTIRLVGAVPVSGTNFYKLMSSKSHALLYPGGVREAV 524
Query: 541 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 600
HRKGEEYKLFWPE SEFVR+A FGAKI+PFG VGEDD Q+V+DYND M IPYF+ QIE
Sbjct: 525 HRKGEEYKLFWPEQSEFVRIAARFGAKIIPFGVVGEDDFGQVVIDYNDLMMIPYFRDQIE 584
Query: 601 ELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 660
E T A +LRT + GEVANQD+H P +PK+PGRFY+ FGKPIET+GRK+ELR++EKAHE
Sbjct: 585 ENTKKAVKLRTGSSGEVANQDLHTPGILPKLPGRFYYLFGKPIETEGRKQELREKEKAHE 644
Query: 661 LYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
LYL +KSEVE CLAYLKEKRE+DPYRNILPRL YQATHGFTS VPTFE
Sbjct: 645 LYLHVKSEVESCLAYLKEKRESDPYRNILPRLFYQATHGFTSDVPTFE 692
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488450|ref|XP_002275233.2| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Vitis vinifera] gi|296082299|emb|CBI21304.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/708 (60%), Positives = 539/708 (76%), Gaps = 20/708 (2%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
MA GAC + VFRR + S++ + NPI +VST ++ ++ + +
Sbjct: 1 MAATGACFVTGGCWSVFRRDMKSATGGLRTNPI----SVSTRPSTMSSEQALAPRVEEKE 56
Query: 61 FVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPPRWF 120
+EK S+ ED E SE +SL+DYF +++D+ S S GGPPRWF
Sbjct: 57 GIEKTISKRFEDM--------------EVSEVERRSLQDYFQQSKDL--SRSDGGPPRWF 100
Query: 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKL 180
SPLECG+ +SPLLLFLPGIDGVGLGL H RLG+IFDIWCLHIPV DRT FT LVKL
Sbjct: 101 SPLECGTRLENSPLLLFLPGIDGVGLGLSMHHHRLGQIFDIWCLHIPVMDRTPFTELVKL 160
Query: 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240
VE TVRSE+ SP +P+YLVGESLG C+ALAVAARNPDIDL LIL NPATSF KS LQ
Sbjct: 161 VERTVRSENFHSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFGKSPLQPL 220
Query: 241 IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPV 300
IPL +++P Q+ + LSLMTGDPL+M M K L LQ T+ ++S+ L ALS+YL V
Sbjct: 221 IPLFDVMPDQLNLGVPYVLSLMTGDPLRMVMTTAEKGLPLQQTVGEISEGLGALSAYLSV 280
Query: 301 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360
L+DILP+ET LW++++L +ASAY NSRLHAVKA++L+L SGKD + SQEE ERL L
Sbjct: 281 LSDILPQETFLWRLKMLSSASAYVNSRLHAVKAEILILSSGKDHFLSSQEEAERLCHVLP 340
Query: 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFR 420
KC+ R F GHFL LEDG+DLVTIIKG ++YRR + HDYVSD++P SEF + E++R
Sbjct: 341 KCKIRKFANSGHFLFLEDGIDLVTIIKGVNFYRRAKYHDYVSDYIPLVPSEFRQATEEYR 400
Query: 421 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 480
W+ + +SPVMLST+ +GKIVRGL+GIPSEGPVLFVGYH LLGL++ ++ +F+ E NILL
Sbjct: 401 WLTIATSPVMLSTMEDGKIVRGLAGIPSEGPVLFVGYHMLLGLELAPMVLQFLAERNILL 460
Query: 481 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 540
RG+AHPMM+ + + G L +LS +D R+ GAVPVSG YKLMSSKSH+LLYPGG+REAL
Sbjct: 461 RGIAHPMMFNRLRSGILPELSTFDTFRVFGAVPVSGSYFYKLMSSKSHILLYPGGMREAL 520
Query: 541 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 600
HRKGEEYKLFWPESSEF+RMA FGAKIVPFG VGEDD+ Q+V+DY+D MKIPYF++QI+
Sbjct: 521 HRKGEEYKLFWPESSEFIRMAARFGAKIVPFGVVGEDDIGQVVIDYDDLMKIPYFRAQIK 580
Query: 601 ELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 660
+LT + LRT++ G+VANQD+H+P +PK+PGRFY++FGKPIET+GRK ELRD+EKAHE
Sbjct: 581 DLTNESVILRTESSGDVANQDVHLPGVLPKIPGRFYYFFGKPIETEGRKHELRDKEKAHE 640
Query: 661 LYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
LYL KSEVE C+AYLKE+R+ DPYRN+ PRL YQATHGFT++VPTF+
Sbjct: 641 LYLHAKSEVESCIAYLKERRKGDPYRNLFPRLFYQATHGFTTEVPTFD 688
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082298|emb|CBI21303.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/614 (69%), Positives = 505/614 (82%), Gaps = 2/614 (0%)
Query: 95 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR 154
+SLKDYF++++D+I+S GGPPRWFSPLECGS SPLLLFLPGIDGVGLGLI HQR
Sbjct: 17 RSLKDYFEQSKDLIRSD--GGPPRWFSPLECGSRLDSSPLLLFLPGIDGVGLGLILHHQR 74
Query: 155 LGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214
LGK+FDIWCLHIPV+DRT+FT LVKLVE TVRSE+ RSP +P+YLVGESLG C+ALAVAA
Sbjct: 75 LGKLFDIWCLHIPVEDRTTFTELVKLVERTVRSENYRSPNKPIYLVGESLGGCLALAVAA 134
Query: 215 RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274
RNPDIDL LIL NPATSF+KS LQS +PLL L+P ++ L LSL+TGDPL+MA+ N
Sbjct: 135 RNPDIDLALILANPATSFSKSPLQSLMPLLSLMPDKLNFSLPFILSLITGDPLRMAIANA 194
Query: 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQ 334
K L LQ + +L Q LVAL SYL VL ILP+ETLLWK+++L++ASA+ANSRLHAVKA+
Sbjct: 195 EKGLPLQQRVGELPQGLVALPSYLSVLFGILPRETLLWKLKMLRSASAFANSRLHAVKAE 254
Query: 335 MLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 394
+L+L SGKD+L+ SQEE ERL AL CE R F GHFL LEDGVDLVTIIKG S+YRR
Sbjct: 255 ILILSSGKDKLLSSQEECERLCHALPNCEIRRFTDSGHFLFLEDGVDLVTIIKGVSFYRR 314
Query: 395 GRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLF 454
+ DY+ D++PPT SEF + E RW ++ PVMLSTL +GKIV+GL+GIPSEGP LF
Sbjct: 315 AKYLDYILDYIPPTPSEFKNVAEPIRWFNSITCPVMLSTLEDGKIVKGLAGIPSEGPTLF 374
Query: 455 VGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514
VGYH LLG++ + L+ +FM E NILLRG+AHPM++ +S G L DLS +D +R++GAVPV
Sbjct: 375 VGYHMLLGIETIPLVLQFMDERNILLRGIAHPMLFKRSSGGSLPDLSRFDTIRLVGAVPV 434
Query: 515 SGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 574
SG N YKLMSSKSH LLYPGGVREA+HRKGEEYKLFWPE SEFVR+A FGAKI+PFG V
Sbjct: 435 SGTNFYKLMSSKSHALLYPGGVREAVHRKGEEYKLFWPEQSEFVRIAARFGAKIIPFGVV 494
Query: 575 GEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGR 634
GEDD Q+V+DYND M IPYF+ QIEE T A +LRT + GEVANQD+H P +PK+PGR
Sbjct: 495 GEDDFGQVVIDYNDLMMIPYFRDQIEENTKKAVKLRTGSSGEVANQDLHTPGILPKLPGR 554
Query: 635 FYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIY 694
FY+ FGKPIET+GRK+ELR++EKAHELYL +KSEVE CLAYLKEKRE+DPYRNILPRL Y
Sbjct: 555 FYYLFGKPIETEGRKQELREKEKAHELYLHVKSEVESCLAYLKEKRESDPYRNILPRLFY 614
Query: 695 QATHGFTSQVPTFE 708
QATHGFTS VPTFE
Sbjct: 615 QATHGFTSDVPTFE 628
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508295|ref|XP_003624436.1| Acyltransferase-like protein [Medicago truncatula] gi|355499451|gb|AES80654.1| Acyltransferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/708 (62%), Positives = 537/708 (75%), Gaps = 12/708 (1%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
M + GA F+ VSSP+FRR KP+ + R A+S +R A T++TE T +
Sbjct: 1 MPSAGASFFTGVSSPLFRRDPPQLLRKPRILRMAPRFAISVDRVPA---TIVTEEKLT-M 56
Query: 61 FVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPPRWF 120
V K+ E+ E E + + E E + K+YF+ A++ I + GGPPRWF
Sbjct: 57 TVAKREEEISTVETE-------KRWEENEEKERRTGWKEYFEHAKEFI-GVADGGPPRWF 108
Query: 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKL 180
SP ECGS +SPL+LFLPGIDG+GLGLI HQ+LG+IFD+WCLHIPV DRTSFT LVKL
Sbjct: 109 SPSECGSRLDNSPLMLFLPGIDGLGLGLISHHQKLGRIFDVWCLHIPVADRTSFTDLVKL 168
Query: 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240
VE TVRSE RSP RP+YLVGESLG C+ALAVAARN DIDLVLIL NPATSF++S LQ
Sbjct: 169 VERTVRSEYERSPNRPIYLVGESLGGCLALAVAARNRDIDLVLILSNPATSFSRSQLQFV 228
Query: 241 IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPV 300
PLLE +P ++ L + LSL G PL++ +DN K L LQ T ++L D SS LPV
Sbjct: 229 TPLLETLPDSLSPALPNILSLTAGGPLRLVLDNFVKGLPLQNTARELIGDFTTFSSSLPV 288
Query: 301 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360
LADILPKETLLWK+++ K+AS YANSRL+A+KAQ L+L SG DQL+PSQ+EGERL L
Sbjct: 289 LADILPKETLLWKLKMSKSASEYANSRLYAIKAQTLILSSGNDQLLPSQQEGERLHKLLP 348
Query: 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFR 420
CE R F GHFLLLE +DLVTI+KGASYYRRG+ HDYVSDF+PPT E ++ E R
Sbjct: 349 NCELRKFDDSGHFLLLEGSIDLVTILKGASYYRRGKYHDYVSDFIPPTPYEAKEVIESNR 408
Query: 421 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 480
+ ++S VMLSTL +G IV+GL+GIPSEGPVLFVGYH LLGL+++ L+ E NIL+
Sbjct: 409 LINAVTSAVMLSTLEDGTIVKGLAGIPSEGPVLFVGYHMLLGLELVPLVSRIYNERNILV 468
Query: 481 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 540
RG+AHPMM+ + K G L ++S +D RIMGAVPV+ NL+KL+SSKSHVLLYPGG+REAL
Sbjct: 469 RGIAHPMMFKRQKNGSLPEISSFDTFRIMGAVPVAPTNLFKLLSSKSHVLLYPGGMREAL 528
Query: 541 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 600
HRKGEEYKLFWPE SEF+RMA FGAKIVPFGAVGEDDL Q+V+DY+D +KIPYFKS+IE
Sbjct: 529 HRKGEEYKLFWPEQSEFIRMAARFGAKIVPFGAVGEDDLGQVVIDYDDLVKIPYFKSEIE 588
Query: 601 ELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 660
+LT A +LRT GEVANQ +HMP +PKVPGRFY+YFGKPIET GRK+EL+DRE + E
Sbjct: 589 KLTNEAMQLRTGASGEVANQQVHMPGILPKVPGRFYYYFGKPIETAGRKQELKDRENSQE 648
Query: 661 LYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
LYLE++SEVE+C+AYLKEKRE+DPYR+I+ RL YQATHGFTS +PTFE
Sbjct: 649 LYLEVQSEVERCIAYLKEKRESDPYRSIVSRLFYQATHGFTSDIPTFE 696
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543629|ref|XP_002512877.1| catalytic, putative [Ricinus communis] gi|223547888|gb|EEF49380.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/719 (61%), Positives = 550/719 (76%), Gaps = 16/719 (2%)
Query: 2 ATVGACIFSAV--SSPVFRRQITSSSE-----KPKRNPILKRVAVSTERTSAATTTVMTE 54
A GAC + + SSPV R + SSS K K N +R AVSTE+ S+++T +
Sbjct: 3 AATGACFPATIFISSPVVRSCLPSSSSSSSYAKQKMN---RRFAVSTEQISSSSTGTSSL 59
Query: 55 TTPTRIFVEKK-SSELVEDEAETKQRVN--VREYSEEESEGNGKSLKDYFDEAEDMIKS- 110
R+ ++K+ E E E K+++N + E +E E KD+F++++D I+S
Sbjct: 60 AENGRLEMKKQLKGEESEREEIVKEKLNPYLLELAEPEIVKYSNGWKDFFEQSKDFIRSE 119
Query: 111 -SSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVK 169
GGGPPRWFSPLECGS +SPLLL+LPGIDGVGLGL+ QH LGKIFDIWCLH+PVK
Sbjct: 120 DGGGGGPPRWFSPLECGSRLENSPLLLYLPGIDGVGLGLVTQHYSLGKIFDIWCLHLPVK 179
Query: 170 DRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229
DRT F GLVKL+E TVRSE++RSP RP+YLVGESLGAC+ALA+AARNPD+DL L+L NP
Sbjct: 180 DRTPFIGLVKLIEETVRSENSRSPNRPIYLVGESLGACLALAIAARNPDVDLALLLANPG 239
Query: 230 TSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQ 289
TSFNKS L+S IPLL++IP Q+ L L+LMTGDPLK+ M NV K + LQ TI LS
Sbjct: 240 TSFNKSQLESLIPLLDIIPDQLLLGLPYLLNLMTGDPLKVVMANVTKPVPLQQTIGGLSH 299
Query: 290 DLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349
D+ LSSYL VL D+LP+ETLLWK++LLK+ASAYANSRLHAVKAQ L+LCSGKDQL+PSQ
Sbjct: 300 DVTILSSYLSVLGDVLPRETLLWKLQLLKSASAYANSRLHAVKAQTLILCSGKDQLLPSQ 359
Query: 350 EEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTS 409
EEG+RL +AL + R F HFL LE+ VDLVTIIKG S+YRRG HDY+SD++ P+
Sbjct: 360 EEGQRLHNALPNSQNRWFQDSSHFLFLENEVDLVTIIKGTSFYRRGARHDYISDYIQPSP 419
Query: 410 SEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLI 469
EF +I + R++ +SPVMLSTL +GKIVRGL+G+PSEGPVL+VGYH LLG ++ ++
Sbjct: 420 PEFKRIYDSNRFIVHATSPVMLSTLEDGKIVRGLAGVPSEGPVLYVGYHMLLGFELTPMV 479
Query: 470 PEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHV 529
+F++E NILLRG+AHP M+ + KEG L +S +D RIMGAVPVSG YKL+SSK+HV
Sbjct: 480 TQFLLERNILLRGIAHPSMFRRLKEGLLPSMSEFDTFRIMGAVPVSGSIFYKLLSSKAHV 539
Query: 530 LLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQ 589
LLYPGGVREA HRKGEEYKLFWPE SEFVRMA FGAKIVPFG VGEDD ++ DY+DQ
Sbjct: 540 LLYPGGVREACHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGVVGEDDFFEVFFDYDDQ 599
Query: 590 MKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRK 649
MK+P+ + I+E+ + +RT++ GEV NQDMH+P +PK PGRFY+YFGKPI+T+GRK
Sbjct: 600 MKVPFLRDYIKEIAEQSKSVRTESNGEVNNQDMHLPGVLPKFPGRFYYYFGKPIQTEGRK 659
Query: 650 RELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
ELRDREKA ELYL++KSEVE CLA+LKEKRENDPYRN+ RL YQATHG T++VPTFE
Sbjct: 660 -ELRDREKAQELYLQVKSEVENCLAFLKEKRENDPYRNLFTRLAYQATHGLTAEVPTFE 717
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060307|ref|XP_002300134.1| predicted protein [Populus trichocarpa] gi|222847392|gb|EEE84939.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/722 (61%), Positives = 542/722 (75%), Gaps = 17/722 (2%)
Query: 1 MATVGACIFSAVSSPVFRRQITSS--SEKPKRNPILKRVAVSTERTSAAT-----TTVMT 53
MA G C+ A S+ V Q+T S S + NP L++ AVS+E T T T
Sbjct: 1 MAATGGCV--AFSTVVRSCQVTPSPSSGNLRPNPSLRQFAVSSESQFTKTVRKSETKRTT 58
Query: 54 ETTPTRIFVEKKSSELVEDEAETKQRVNVR---EYSEEESEGNGKSLKDYFDEAEDMIKS 110
IF EK E E + KQ+ E +E + + + KSLKDYF+E++D+I+S
Sbjct: 59 SFGENGIFKEKHKEEAREGVTKEKQKNPYELGLERNESDEDRSRKSLKDYFEESKDLIRS 118
Query: 111 SSGGG--PPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPV 168
GGG PPRWFSPL+CGS DSPLLL+LPGIDGVGLGLI HQ LG+IFDIWCLHIPV
Sbjct: 119 EGGGGGGPPRWFSPLDCGSRLDDSPLLLYLPGIDGVGLGLIMHHQSLGEIFDIWCLHIPV 178
Query: 169 KDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228
KDRTSF LVKLVE TVRSE+ SP RP+YLVGESLGAC+ALAVA RNPDIDL LIL NP
Sbjct: 179 KDRTSFIDLVKLVEQTVRSENCHSPNRPIYLVGESLGACLALAVAVRNPDIDLSLILANP 238
Query: 229 ATSFNKSVLQSTIPLLELIPGQITTMLSS--TLSLMTGDPLKMAMDNVAKRLSLQPTIQD 286
TSF KS LQ I LL +IP + +L LS+ GDPL+MAMD V K L LQ T +
Sbjct: 239 GTSFEKSQLQPLIHLLGIIPVHLYCLLEPHYGLSMRLGDPLRMAMDKVMKGLPLQQTAEG 298
Query: 287 LSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346
L +D+ A+SSY+ VLA+ILP+ETLLWK+++LK+ASA+ANSRLHAVKAQ L+L SG+DQL+
Sbjct: 299 LLKDVAAMSSYVYVLANILPEETLLWKLKMLKSASAFANSRLHAVKAQTLLLTSGRDQLL 358
Query: 347 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMP 406
PS++EG+RL AL KCE R F +GH+L LEDGVDLVT+IKGAS+YRRG+ HDYV D++P
Sbjct: 359 PSEDEGKRLRRALPKCEIRRFNDNGHYLFLEDGVDLVTVIKGASFYRRGKCHDYVFDYIP 418
Query: 407 PTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVL 466
PT SE ICE R +SPVMLSTL +GKIV+GL+GIPSEGPVLF+GYH LLG +++
Sbjct: 419 PTPSEIKNICESNRLFMRATSPVMLSTLEDGKIVKGLAGIPSEGPVLFIGYHMLLGYELV 478
Query: 467 TLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSK 526
++ ++E NIL+RG+AHPMM+ + KEG L +LS +D R MGAVPVSG NLYKL+SSK
Sbjct: 479 PMVMNLLLERNILMRGMAHPMMFTRKKEGYLPELSSFDTYRTMGAVPVSGTNLYKLLSSK 538
Query: 527 SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDY 586
+HVLLYPGG+REA HRKGE+YKL WPE SEFVRMA FGAKIVPFG GEDD +IV DY
Sbjct: 539 AHVLLYPGGLREACHRKGEQYKLIWPEQSEFVRMAARFGAKIVPFGVAGEDDFGEIVFDY 598
Query: 587 NDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETK 646
+DQMKIP+ K I+ L+ A +RT EV NQD+H P +PK PGRFY+YFGKPIET+
Sbjct: 599 DDQMKIPFLKDFIKSLSEEADTVRTGLNSEV-NQDIHSPVVLPKFPGRFYYYFGKPIETE 657
Query: 647 GRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPT 706
GR ELRD++ AHELY+++KSEVEKCLA+L+EKRE+DPYRN+L RL YQ+THGF S+VPT
Sbjct: 658 GRMSELRDKDNAHELYMQVKSEVEKCLAFLQEKRESDPYRNLLARLAYQSTHGFDSEVPT 717
Query: 707 FE 708
FE
Sbjct: 718 FE 719
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464236|ref|XP_004149835.1| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/729 (58%), Positives = 530/729 (72%), Gaps = 32/729 (4%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
MA GAC+F + F R TS + K +P+ A R +A TT M + + +
Sbjct: 1 MAATGACVFHGLLFSAFPRDRTSFTASFKSSPLAIHNA---PRFAALPTTSMDQVASSSL 57
Query: 61 -------------FVEKK--------SSELVEDEAETKQRVNVREYSEEESEGNGKSLKD 99
FV + ++ ++ AE R N S E +SL D
Sbjct: 58 PEDIASTSSVGDLFVNARFDKTYKHATTAILGAGAENGTRFN----SGSEHTEVRRSLND 113
Query: 100 YFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIF 159
YF+++ D+I+S +G PPRWFSPLE GS +SPLLLFLPGIDGVGLGLI+ HQRLGKIF
Sbjct: 114 YFEQSVDLIRSDNG--PPRWFSPLESGSRIHNSPLLLFLPGIDGVGLGLIKHHQRLGKIF 171
Query: 160 DIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDI 219
D+WCLHIPV+DRT FT L+KLVE TV+ E RSPK+P+YL GES GAC+AL+VAARNP I
Sbjct: 172 DVWCLHIPVRDRTPFTELLKLVEKTVKDEHRRSPKKPIYLAGESFGACLALSVAARNPHI 231
Query: 220 DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279
D++LIL NPATSF+KS LQ + LLE +P + L L+L+ GD ++++ V
Sbjct: 232 DIILILSNPATSFSKSPLQPVVSLLEFMPESLQVSLPYILNLLKGDASRLSLAGVGD--I 289
Query: 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLC 339
LQ + +LSQDL A+SS+L VLADILP ETL+WK+ +LK+ASA +NSRLHA+KAQ L+LC
Sbjct: 290 LQRIVSELSQDLGAVSSHLSVLADILPVETLIWKLNMLKSASADSNSRLHAIKAQTLILC 349
Query: 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHD 399
SG+DQL+PS EEGERL L KCE R F +GHFL LEDG+DL T I+GAS+YRR + D
Sbjct: 350 SGRDQLLPSMEEGERLRQFLPKCEIRRFSNNGHFLFLEDGLDLATTIRGASFYRRSQYLD 409
Query: 400 YVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHN 459
YVSDF+PP+ +E KI ED+ + +SPV+LSTL +GKIVRGL+GIP EGPVLFVGYH
Sbjct: 410 YVSDFIPPSPAEVRKIFEDYSLVNFATSPVLLSTLEDGKIVRGLAGIPEEGPVLFVGYHM 469
Query: 460 LLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINL 519
LLGL++ ++ +F E NI+LRG+AHP+M+ K KEG L DL+ YD R+MGAVPV+ N
Sbjct: 470 LLGLELAPMVGQFFKEKNIILRGMAHPLMFIKIKEGRLPDLASYDSFRMMGAVPVTAKNF 529
Query: 520 YKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 579
YKL+S+KSHVLLYPGG+REALHRKGE YKLFWPE SEF+RMA FGAKIVPFG VGEDD+
Sbjct: 530 YKLLSTKSHVLLYPGGMREALHRKGEAYKLFWPEQSEFIRMAARFGAKIVPFGVVGEDDI 589
Query: 580 AQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYF 639
+++V DY DQMK+P FK QIEELT A +LR GEVANQD+H P +PK+PGRFY+YF
Sbjct: 590 SEMVFDYEDQMKVPLFKKQIEELTSEAVKLRAHMNGEVANQDVHFPGIIPKLPGRFYYYF 649
Query: 640 GKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHG 699
GKP ET+GRK ELR+REKAHELYL++K EVE CLAYL KRE+DPYR + PRL YQA HG
Sbjct: 650 GKPFETEGRKEELRNREKAHELYLQVKGEVENCLAYLTNKRESDPYRQLWPRLAYQAKHG 709
Query: 700 FTSQVPTFE 708
FT++VPTFE
Sbjct: 710 FTAEVPTFE 718
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571611|ref|XP_003553970.1| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/713 (61%), Positives = 535/713 (75%), Gaps = 27/713 (3%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPI---LKRVAVSTERTSAATTTVMTETTP 57
MA GAC+FSA +FRR+ S + KP + I R+AVS +R A+T V
Sbjct: 1 MAAAGACLFSAA---LFRREPPSPAGKPSSHRISSTTPRLAVSVDRVPASTAAV------ 51
Query: 58 TRIFVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPP 117
+S E + A +++ + +E NG K+Y ++++++I+ GGPP
Sbjct: 52 -------ESGE--GNGAVVREKRMEEKEEKENRRMNG--WKEYLEQSKELIEPD--GGPP 98
Query: 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGL 177
RWFSPLEC S SPLLLFLPGIDGVGLGLI HQ+LG+IFD+WCLHIPV DRT FT L
Sbjct: 99 RWFSPLECASRLDYSPLLLFLPGIDGVGLGLILHHQKLGRIFDMWCLHIPVADRTPFTDL 158
Query: 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237
+K+VE TVRSE RSP RP+YLVGESLGAC+ALAVAA NPDIDLVLIL NPATSF +S L
Sbjct: 159 LKIVERTVRSEHQRSPNRPIYLVGESLGACLALAVAALNPDIDLVLILANPATSFRRSSL 218
Query: 238 QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSY 297
Q PLLE +P ++ L + L G+ L+M +DNV + L LQ T +L +D A S
Sbjct: 219 QLLTPLLEALPNPLSPGLPNILRSTEGESLRMLLDNVVQGLPLQNTAGELVKDFTAFSLS 278
Query: 298 LPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357
LPVLADILPKETL+WK+++LK+ASAYA+SRL+A+KAQ L+LCSG DQL+PSQ+EGERL
Sbjct: 279 LPVLADILPKETLVWKLKMLKSASAYAHSRLYAIKAQTLILCSGNDQLLPSQQEGERLLK 338
Query: 358 AL--HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKI 415
L KC+ R F GHFL LED +DLVTIIKG SYYRRG+ HDY SDF+PPT E I
Sbjct: 339 LLPKSKCQLRKFDDSGHFLFLEDSIDLVTIIKGTSYYRRGKYHDYASDFIPPTLDEAKNI 398
Query: 416 CEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE 475
E +++S VMLSTL +G +V+GL+GIPSEGPVLFVGYH LLGL+ + L+ +E
Sbjct: 399 IESNSLFNLIASAVMLSTLEDGTLVKGLAGIPSEGPVLFVGYHMLLGLEKIPLVSRIFLE 458
Query: 476 SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGG 535
NILLRG+AHPMM+ +SK G L DLS +D R+MGAVPV+ NL+KL SSKSHVLLYPGG
Sbjct: 459 RNILLRGVAHPMMFMRSKNGRLPDLSSFDKFRVMGAVPVAPTNLFKLFSSKSHVLLYPGG 518
Query: 536 VREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYF 595
+REALHRKGEEYKLFWPE SEFVRMA FGAKIVPFGAVGEDDL ++V DY+D +KIPYF
Sbjct: 519 MREALHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGAVGEDDLGEVVFDYDDLVKIPYF 578
Query: 596 KSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR 655
+S+IE LT A +LR+D GEVANQ +HMP +PKVPGRFY+YFGKP+E +GRK+ELRDR
Sbjct: 579 RSEIESLTNEATQLRSDAGGEVANQPVHMPLILPKVPGRFYYYFGKPLEMEGRKQELRDR 638
Query: 656 EKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
+KAHE+YL++KSEVE+C+AYLK KRE+DPYR I PRL+YQATHGF S+VPTFE
Sbjct: 639 KKAHEIYLQVKSEVERCIAYLKVKRESDPYRGIGPRLLYQATHGFESEVPTFE 691
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060309|ref|XP_002300135.1| predicted protein [Populus trichocarpa] gi|222847393|gb|EEE84940.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/639 (64%), Positives = 491/639 (76%), Gaps = 24/639 (3%)
Query: 84 EYSEEESEGNGKSLKDYFDEAEDMIKSS--SGGGPPRWFSPLECGSHTRDSPLLLFLPGI 141
E +E E + KSL+DYF+E+++ I S GGGPPRWFSPLECGS +SPLLLFLPGI
Sbjct: 14 EKTEMELRSSRKSLEDYFEESKNFIAKSDGGGGGPPRWFSPLECGSRLDNSPLLLFLPGI 73
Query: 142 DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVG 201
DG+GLGL +QH LGKIFDIWCLHIPVKDRTSF GLVKL+E TVRSES P RP+YL G
Sbjct: 74 DGIGLGLSKQHNTLGKIFDIWCLHIPVKDRTSFLGLVKLIERTVRSESYCFPNRPIYLAG 133
Query: 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261
ESLGAC+ALAVAARNPD+DLVL+L NPATSF KS LQ IPLLE++P Q +
Sbjct: 134 ESLGACLALAVAARNPDVDLVLVLANPATSFEKSQLQPLIPLLEVLPFQHQLTI------ 187
Query: 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS 321
P MAMDN K L+ TI LSQDLVA+SSYL LA+ILP+ETLLWK+++LK AS
Sbjct: 188 ----PYMMAMDNAVKGFPLEQTIGGLSQDLVAMSSYLNALANILPRETLLWKLQMLKTAS 243
Query: 322 AYANSRLHAVKAQMLVL-------C----SGKDQLMPSQEEGERLSSALHKCEPRNFYGH 370
AYANSRLHAVK+Q LVL C SG+DQL+PS+EEG+RL AL KCE R F
Sbjct: 244 AYANSRLHAVKSQTLVLSRSSLICCLPFLSGRDQLLPSEEEGQRLYVALPKCEIRKFNDS 303
Query: 371 GHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVM 430
GHFL LE VDL IIKGAS YRRG+ DY+SD++PPT EF K+ + R + +SPVM
Sbjct: 304 GHFLFLEHDVDLANIIKGASCYRRGKYLDYISDYIPPTPLEFKKLYDSNRLFVLATSPVM 363
Query: 431 LSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYF 490
LS +GKIVRGL+G+PSEGPVL+VGYH L+G +V+ LI F++E NIL+RG+ HPM+Y
Sbjct: 364 LSYFQDGKIVRGLAGVPSEGPVLYVGYHMLMGFEVIPLISNFLLERNILIRGITHPMLYV 423
Query: 491 K-SKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKL 549
K KEG + L +DV+R MGAVPVSG N YKLMSSK+H LLYPGG+REA HRKGEEYKL
Sbjct: 424 KLKKEGMMPPLQQFDVVRTMGAVPVSGSNFYKLMSSKAHALLYPGGMREAYHRKGEEYKL 483
Query: 550 FWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARL 609
FWPE SEFVRMA+ FGAKIVPFG VGEDD ++V DY+DQMKIP+ + I+ L+ L
Sbjct: 484 FWPEKSEFVRMASRFGAKIVPFGVVGEDDFGEVVFDYDDQMKIPFLRDYIKGLSEEVVSL 543
Query: 610 RTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEV 669
RT+ GEV QD+H VPK PGRFY+YFGKPIET+GRK+ELRDREKAHELYL +KSEV
Sbjct: 544 RTEADGEVGQQDLHQVGIVPKFPGRFYYYFGKPIETEGRKQELRDREKAHELYLHVKSEV 603
Query: 670 EKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
E C+A+LKEKRE+DPYRNIL RL YQA+HGF ++VPTF+
Sbjct: 604 ENCIAFLKEKRESDPYRNILARLAYQASHGFDAEVPTFD 642
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508285|ref|XP_003624431.1| Acyltransferase-like protein [Medicago truncatula] gi|355499446|gb|AES80649.1| Acyltransferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/713 (57%), Positives = 506/713 (70%), Gaps = 48/713 (6%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILK---RVAVSTERTSAATTTVMTETTP 57
M G C F VSS +F S + K K I+ R A+STER P
Sbjct: 1 MLAAGVCFFPTVSSSLFHHVPLSKAMKVKSGGIMSIVPRFAMSTERV------------P 48
Query: 58 TRIFVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPP 117
+ E KQR + K+YF++A+++I++ G PP
Sbjct: 49 VK---------------EEKQRRS--------------GWKEYFEQAKELIETDDG--PP 77
Query: 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGL 177
RWFSPLEC S +SPL+LFLPGIDGVGL LI H +LG+IFD+WCLHIPV DRT FT L
Sbjct: 78 RWFSPLECSSQWDNSPLMLFLPGIDGVGLALISHHHKLGRIFDLWCLHIPVADRTPFTDL 137
Query: 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237
VKLVE TVRSE RSP RP+YL+GESLG C+ALAVAARN DIDLVLIL NPATSF++S++
Sbjct: 138 VKLVEKTVRSEYKRSPNRPIYLIGESLGGCLALAVAARNRDIDLVLILANPATSFSRSLM 197
Query: 238 QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSY 297
Q PLL+ +P + L + LSL GDPL+M +DN K L L + +D SS
Sbjct: 198 QLLSPLLDALPDSFSPALPNILSLTAGDPLRMVLDNAVKGLPLLNAAGEPIEDFTTFSSS 257
Query: 298 LPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357
LPVLADILPKETLLWK+++LK+ASAYANS LHA+KAQ L+LCSG D+L+PSQ+EGERL
Sbjct: 258 LPVLADILPKETLLWKLKMLKSASAYANSGLHAIKAQTLILCSGNDRLLPSQQEGERLRQ 317
Query: 358 ALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICE 417
L CE R F GHFL LE +DL+T+IKG SYYRRG+ HDY SDF+PPT E KI E
Sbjct: 318 LLPSCELRKFDNSGHFLFLEGSIDLLTVIKGTSYYRRGKYHDYASDFIPPTPDEAKKIIE 377
Query: 418 DFRW--MRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE 475
+ + +++ VMLSTL +GKIV+GL+GIPSEGPVL VG H LL LDV I F E
Sbjct: 378 SYSYSLFNIVTGSVMLSTLEDGKIVKGLAGIPSEGPVLLVGNHMLLALDVAPFIIRFFTE 437
Query: 476 SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGG 535
+IL+RG AHPM + + K G L ++S +D +R+MGA PV NL+ L++SKSHVLLYPGG
Sbjct: 438 RDILVRGTAHPMFFKRQKSGRLPEVSSFDSLRVMGAYPVGVSNLFNLLASKSHVLLYPGG 497
Query: 536 VREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYF 595
+RE HRKGEEYKLFWPE SEFVRMA FGAKIVPFG+VGEDDL Q+V+DY+D +KIPYF
Sbjct: 498 LREGFHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGSVGEDDLGQVVIDYDDLVKIPYF 557
Query: 596 KSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR 655
+S+IE LT +LR D GEVANQ +++P +PKVPGRFY+YFGKPIET+GRK+EL+D+
Sbjct: 558 RSEIESLTNEVPQLRADVDGEVANQQVYLPGILPKVPGRFYYYFGKPIETEGRKQELKDK 617
Query: 656 EKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
+K+ ELY E+K+EVE+C+AYLKEKRE+DPYR+IL RL YQA HG TS +PTFE
Sbjct: 618 KKSQELYFEVKAEVERCIAYLKEKRESDPYRSILSRLSYQAAHGPTSDIPTFE 670
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 709 | ||||||
| TAIR|locus:2163091 | 684 | AT5G41120 "AT5G41120" [Arabido | 0.884 | 0.916 | 0.584 | 4.8e-197 | |
| TAIR|locus:2088404 | 701 | PES2 "AT3G26840" [Arabidopsis | 0.906 | 0.917 | 0.530 | 7.4e-185 | |
| TAIR|locus:2199481 | 704 | PES1 "AT1G54570" [Arabidopsis | 0.902 | 0.909 | 0.505 | 3.6e-176 | |
| TAIR|locus:2088474 | 634 | AT3G26820 "AT3G26820" [Arabido | 0.475 | 0.531 | 0.5 | 1.4e-161 | |
| UNIPROTKB|O53962 | 287 | Rv1920 "PROBABLE MEMBRANE PROT | 0.331 | 0.818 | 0.299 | 7.2e-18 | |
| UNIPROTKB|F1RT51 | 330 | LOC100156514 "Uncharacterized | 0.176 | 0.378 | 0.286 | 0.00061 | |
| UNIPROTKB|Q0VCR6 | 334 | TMEM68 "Transmembrane protein | 0.176 | 0.374 | 0.286 | 0.00062 |
| TAIR|locus:2163091 AT5G41120 "AT5G41120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1908 (676.7 bits), Expect = 4.8e-197, P = 4.8e-197
Identities = 370/633 (58%), Positives = 463/633 (73%)
Query: 77 KQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSG-GGPPRWFSPLECGSHTRDSPLL 135
K VN Y+EE KSL D+ EA D + S G GGPPRWFSPLECG+ +SPLL
Sbjct: 53 KVTVNPYSYTEEVRPEERKSLTDFLTEAGDFVNSDGGDGGPPRWFSPLECGARAPESPLL 112
Query: 136 LFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKR 195
L+LPGIDG GLGLIRQH+RLG+IFDIWCLH PVKDRT + KL+E TVRSE R P R
Sbjct: 113 LYLPGIDGTGLGLIRQHKRLGEIFDIWCLHFPVKDRTPARDIGKLIEKTVRSEHYRFPNR 172
Query: 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQIXXXX 255
P+Y+VGES+GA +AL VAA NPDIDLVLIL NP T F +LQ + LLE++P +
Sbjct: 173 PIYIVGESIGASLALDVAASNPDIDLVLILANPVTRFTNLMLQPVLALLEILPDGVPGLI 232
Query: 256 XXXXXXXXGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIE 315
M +N A ++ + L D A SS LP L I PK+TLLWK++
Sbjct: 233 TENFGFYQEMFETMLNENDAAQMG-----RGLLGDFFATSSNLPTLIRIFPKDTLLWKLQ 287
Query: 316 LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 375
LLK+ASA ANS++ V AQ L+L SG+DQ + ++E+ ERL AL +CE R +G FL
Sbjct: 288 LLKSASASANSQMDTVNAQTLILLSGRDQWLMNKEDIERLRGALPRCEVRELENNGQFLF 347
Query: 376 LEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLA 435
LEDGVDLV+IIK A YYRRG++ DY+SD++ PT EF + E R + ++SPV LSTL
Sbjct: 348 LEDGVDLVSIIKRAYYYRRGKSLDYISDYILPTPFEFKEYEESQRLLTAVTSPVFLSTLK 407
Query: 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEG 495
NG +VR L+GIPSEGPVL+VG H LLG+++ + F+ E NILLRGLAHP+M+ K
Sbjct: 408 NGAVVRSLAGIPSEGPVLYVGNHMLLGMELHAIALHFLKERNILLRGLAHPLMFTKKTGS 467
Query: 496 GLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESS 555
L D+ YD+ RI+GAVPVSG+N YKL+ SK+HV LYPGGVREALHRKGEEYKLFWPE S
Sbjct: 468 KLPDMQLYDLFRIIGAVPVSGMNFYKLLRSKAHVALYPGGVREALHRKGEEYKLFWPEHS 527
Query: 556 EFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKG 615
EFVR+A+ FGAKI+PFG VGEDDL ++VLDY+DQMKIP+ K+ IEE+T + LR D +G
Sbjct: 528 EFVRIASKFGAKIIPFGVVGEDDLCEMVLDYDDQMKIPFLKNLIEEITQDSVNLRNDEEG 587
Query: 616 EVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAY 675
E+ QD+H+P VPK+PGRFY YFGKPI+T+GR++EL ++EKAHE+YL++KSEVE+C+ Y
Sbjct: 588 ELGKQDLHLPGIVPKIPGRFYAYFGKPIDTEGREKELNNKEKAHEVYLQVKSEVERCMNY 647
Query: 676 LKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
LK KRE DPYRNILPR +Y THGF+SQ+PTF+
Sbjct: 648 LKIKRETDPYRNILPRSLYYLTHGFSSQIPTFD 680
|
|
| TAIR|locus:2088404 PES2 "AT3G26840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1793 (636.2 bits), Expect = 7.4e-185, P = 7.4e-185
Identities = 347/654 (53%), Positives = 468/654 (71%)
Query: 62 VEKKSSELVEDEAETKQRVNVREYSEEESEGNG--KSLKDYFDEAEDMIKSSSGGGPPRW 119
V+++ E+ A T +V YS+ E+ K L D+ +EA + + GGGPPRW
Sbjct: 51 VQRRRKNNDENRA-TVAKVVENPYSKVEAARPDLQKRLSDFLEEAREFV--GDGGGPPRW 107
Query: 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVK 179
FSPLECG+ +SPLLL+LPGIDG GLGLIR H++LG+IFDIWCLHIPV DRT LVK
Sbjct: 108 FSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEIFDIWCLHIPVSDRTPVKDLVK 167
Query: 180 LVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS 239
L+E TV+SE+ R P RP+YLVGES+GAC+AL VAARNP+IDL LILVNPAT N ++Q
Sbjct: 168 LIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVNNFMVQP 227
Query: 240 TIPLLELIPGQIXXXXXXXXXXXX--GDPLKMAMDNVAKRLSLQP---TIQDLSQDLVAL 294
+L ++P + GDPL +D ++ S+Q + +D++A+
Sbjct: 228 LSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSNEFSVQRMGGVGGGMLRDVLAV 287
Query: 295 SSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354
S+ LP L+ + PK+TLLWK+E+LK A A NS +++V+A+ L+L SG+D + +E+ +R
Sbjct: 288 SANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVRAETLILLSGRDHWLLKEEDIDR 347
Query: 355 LSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNK 414
S L KC R +G F LLEDGVDL TIIK +YRRG++HD+++D++ PT+ E +
Sbjct: 348 YSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCTCFYRRGKSHDHITDYIMPTTFELKQ 407
Query: 415 ICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMI 474
+D R + +SPVMLSTL +G +VR L G+PSEGPVL+VGYH +LG ++ ++ + M
Sbjct: 408 QVDDHRLLMDGTSPVMLSTLEDGTVVRSLEGLPSEGPVLYVGYHMILGFELAPMVIQLMT 467
Query: 475 ESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPG 534
E NI LRGLAHPM+ FK+ + L D +D +IMG VPVS N+YKL+ K+HVLLYPG
Sbjct: 468 ERNIHLRGLAHPML-FKNLQDSLVDTKMFDKYKIMGGVPVSHFNIYKLLREKAHVLLYPG 526
Query: 535 GVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPY 594
GVREALHRKGEEYKLFWPE SEFVR+A+ FGAKIVPFG VGEDD+ +IVLD NDQ IP
Sbjct: 527 GVREALHRKGEEYKLFWPERSEFVRVASKFGAKIVPFGVVGEDDICEIVLDSNDQRNIPI 586
Query: 595 FKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRD 654
K +E+ T A +R + E+ NQ+ + P VPK+PGRFY+YFGKPIET G+++EL+D
Sbjct: 587 LKDLMEKATKDAGNIREGDESELGNQECYFPGLVPKIPGRFYYYFGKPIETAGKEKELKD 646
Query: 655 REKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 708
+EKA ELYL++KSEVE+C+ YLK KRE+DPYR++LPR++YQA+HG++S++PTF+
Sbjct: 647 KEKAQELYLQVKSEVEQCIDYLKVKRESDPYRHLLPRMLYQASHGWSSEIPTFD 700
|
|
| TAIR|locus:2199481 PES1 "AT1G54570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1711 (607.4 bits), Expect = 3.6e-176, P = 3.6e-176
Identities = 330/653 (50%), Positives = 453/653 (69%)
Query: 64 KKSSELVEDEAETKQRVNVREYSEEESEGNG-KSLKDYFDEAEDMIKSSSGGGPPRWFSP 122
+K + V + ++K+++ E +G G KS+KDYF A++++K+ GGPPRWFSP
Sbjct: 58 QKGANEVNGKGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKAD--GGPPRWFSP 115
Query: 123 LECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVE 182
++CG D+P LLFLPG+DG G+GL+ H+ LGK F + CLHIPV DRT F GL+K+VE
Sbjct: 116 VDCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVE 175
Query: 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP 242
+R E P +P+YLVG+S G C+ALAVAARN +DLVLILVNPATSF++S LQ +P
Sbjct: 176 DVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLP 235
Query: 243 LLELIPGQIXXXXXXXXXXXXGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLA 302
+LE++P ++ GDP+KMA + +L I+ L Q L + LP+L+
Sbjct: 236 ILEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLT--KTMLPLLS 293
Query: 303 D---ILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359
+ I+P+ETLLWK++LL++ AYANSR+HAV+A++LVL SGKD ++PSQEE +RL L
Sbjct: 294 ELGGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLL 353
Query: 360 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICED- 418
C R F +GH LLLED + L+T+IKG YRR +D VSDF+PP+ E ++
Sbjct: 354 KNCSVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEV 413
Query: 419 FRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNI 478
++R V ST+ +GKIV+GL+G+P +GPVL VGYH L+GL++ + F+ E NI
Sbjct: 414 LGFLRNAVGSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSEAFIKEKNI 473
Query: 479 LLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVRE 538
L RG+AHP++Y + D D +++ GA PV+ NL+KL+ SKSHVLL+PGG RE
Sbjct: 474 LFRGMAHPVLYSDNDPAKAFDYG--DWIKVFGAYPVTATNLFKLLDSKSHVLLFPGGARE 531
Query: 539 ALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQ 598
ALH +GE+YKL WPE EFVRMA FGA IVPFG VGEDD+A++VLDYND MKIP
Sbjct: 532 ALHNRGEQYKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLMKIPILNDY 591
Query: 599 IEELT--VTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDRE 656
I E+T +LR +++GEVANQ +++P +PKVPGRFY+ FGKPIETKGR ++D+E
Sbjct: 592 ITEVTRDTKQFKLREESEGEVANQPLYLPGLIPKVPGRFYYLFGKPIETKGRPELVKDKE 651
Query: 657 KAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFEP 709
+A+++YLE+K+EVE +AYL +KRE DPYR++L RL Y TH + VP+FEP
Sbjct: 652 EANQVYLEVKAEVENSIAYLLKKREEDPYRSVLDRLNYSLTHTTATHVPSFEP 704
|
|
| TAIR|locus:2088474 AT3G26820 "AT3G26820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 851 (304.6 bits), Expect = 1.4e-161, Sum P(2) = 1.4e-161
Identities = 171/342 (50%), Positives = 232/342 (67%)
Query: 103 EAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIW 162
EA D + GGGPPRWFSPLEC + +SPLLLFLPGIDG GLGLIR H++LG+IFDIW
Sbjct: 60 EARDFV--GDGGGPPRWFSPLECRAQAPNSPLLLFLPGIDGTGLGLIRHHKKLGEIFDIW 117
Query: 163 CLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLV 222
CLHIPV DRT F LVKL+E TV+SE+ R P RP+YLVGES+GAC+AL VAARNP++DL
Sbjct: 118 CLHIPVSDRTPFKDLVKLIERTVKSENYRFPNRPIYLVGESIGACLALDVAARNPNVDLA 177
Query: 223 LILVNPATSFNKSVLQSTIPLLELIPGQIXXXXXXXXXXXXGDPLKMAMDNVAKRLSLQP 282
LILVNPAT N + + + +L ++P I G PL ++ ++ S+Q
Sbjct: 178 LILVNPATHVNNFMSKPLLGMLNVLPDGIPTLWEDVFGFKQGAPLTGILEAMSNEFSVQR 237
Query: 283 ---TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLC 339
+ +DL A+S+ LP L+ + K+TLLWK+E+LK+A A NS +++VKA+ L+L
Sbjct: 238 MGGVGGGMLRDLFAVSANLPTLSRMFSKDTLLWKLEMLKSAIASVNSHIYSVKAETLILP 297
Query: 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHD 399
SG+DQ + ++E+ R S L C R +G F LLED +DL TIIK +YRRG++HD
Sbjct: 298 SGRDQWLLNEEDIVRYSRTLPNCIVRKLDDNGQFPLLEDSLDLATIIKLTCFYRRGKSHD 357
Query: 400 YVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVR 441
YVSD++ PT E ++ ++ R + SPVMLSTL +G +++
Sbjct: 358 YVSDYIKPTPFELQQLLDEHRLLMDAISPVMLSTLEDGLLLK 399
|
|
| UNIPROTKB|O53962 Rv1920 "PROBABLE MEMBRANE PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Score = 227 (85.0 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 76/254 (29%), Positives = 119/254 (46%)
Query: 440 VRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSD 499
V G+ +P+E +L VG HN LGL L+ + E ++R L +FK G
Sbjct: 49 VYGIENVPTERALL-VGNHNTLGLVDAPLLAAELWERGRIVRSLGDHA-HFKIP-GWRDA 105
Query: 500 LSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVR 559
L+ V+ G ++ +LM V+++PGG RE RK E YKL W F R
Sbjct: 106 LTRTGVVE--GTREITS----ELMRRGELVMVFPGGAREVNKRKNERYKLVWKNRLGFAR 159
Query: 560 MATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVAN 619
+A G IVPF +VG + IVLD + P ++ L A +L G
Sbjct: 160 LAIQHGYPIVPFASVGAEHGIDIVLDNESPLLAP-----VQFL---AEKLLGTKDGPALV 211
Query: 620 QDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEK 679
+ + + PVP+ P R Y++FG+PI+T + D A + + +E + + +
Sbjct: 212 RGVGLT-PVPR-PERQYYWFGEPIDTTEFMGQQADDNAARRVRERAAAAIEHGIELMLAE 269
Query: 680 RENDPYRNILPRLI 693
R DP R+++ RL+
Sbjct: 270 RAADPNRSLVGRLL 283
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| UNIPROTKB|F1RT51 LOC100156514 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 39/136 (28%), Positives = 58/136 (42%)
Query: 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEG 495
+G V G+ IP EGP L + YH + +D + + I R +A +Y K
Sbjct: 108 HGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVY---KIP 164
Query: 496 GLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVL-LYPGGVREALHRKGEEYKLFWPES 554
G S L DV + + + + H+L + PGGVREAL E Y + W
Sbjct: 165 GFSLL--LDVFCALHGPREKCVEILR----SGHLLAISPGGVREAL-LSDETYNIVWGNR 217
Query: 555 SEFVRMATTFGAKIVP 570
F ++A I+P
Sbjct: 218 KGFAQVAIDAKVPIIP 233
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| UNIPROTKB|Q0VCR6 TMEM68 "Transmembrane protein 68" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEG 495
+G V G+ IP EGP L + YH + +D + + I R +A +F K
Sbjct: 108 HGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVAD---HFVFKIP 164
Query: 496 GLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVL-LYPGGVREALHRKGEEYKLFWPES 554
G S L + + A+ +++ S H+L + PGGVREAL E Y + W
Sbjct: 165 GFSLL-----LDVFCAIHGPREKCVEILQS-GHLLAISPGGVREAL-MSDETYNIVWGNR 217
Query: 555 SEFVRMATTFGAKIVP 570
F ++A I+P
Sbjct: 218 KGFAQVAIDAKVPIIP 233
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 709 676 0.00078 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 615 (65 KB)
Total size of DFA: 336 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.18u 0.21s 59.39t Elapsed: 00:00:03
Total cpu time: 59.19u 0.21s 59.40t Elapsed: 00:00:03
Start: Mon May 20 22:49:01 2013 End: Mon May 20 22:49:04 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00037918001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (693 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 709 | |||
| cd07987 | 212 | cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltra | 4e-37 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 1e-07 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 9e-06 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 7e-05 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 8e-05 | |
| pfam10230 | 260 | pfam10230, DUF2305, Uncharacterized conserved prot | 7e-04 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 8e-04 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 0.003 | |
| PLN02783 | 315 | PLN02783, PLN02783, diacylglycerol O-acyltransfera | 0.003 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 0.003 | |
| pfam03982 | 297 | pfam03982, DAGAT, Diacylglycerol acyltransferase | 0.004 |
| >gnl|CDD|153249 cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 4e-37
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 42/243 (17%)
Query: 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEF-MIESNILLRGLAHPMMYFKSKEG 495
VRGL IP EGP L V H L +D L F ++ L R LA F
Sbjct: 7 VYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALAD-HFLFPLPGL 65
Query: 496 GLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESS 555
D++R +GAVP S N +L+ VL++PGG REAL K EEY L W +
Sbjct: 66 R-------DLLRRLGAVPGSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRK 118
Query: 556 EFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKG 615
F R+A GA IVP GE++L +++ D + + F RL
Sbjct: 119 GFARLALRAGAPIVPVFTFGEEELFRVLGDPDGPVGKRLF------------RL------ 160
Query: 616 EVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR---EKAHELYL-EIKSEVEK 671
+ +P +P Y FG+PI E+ H+ Y+ ++ +EK
Sbjct: 161 ------LPLPRRLP-----LYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELIEK 209
Query: 672 CLA 674
Sbjct: 210 HKK 212
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Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. Length = 212 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.5 bits (127), Expect = 1e-07
Identities = 41/266 (15%), Positives = 78/266 (29%), Gaps = 16/266 (6%)
Query: 130 RDSPLLLFLPGIDG---VGLGLIRQHQRLGKIFDIWCLHIP-----VKDRTSFTGLVKLV 181
P L+ L G G V + + L + + + S + +
Sbjct: 19 GGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDL 78
Query: 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI 241
+ + V LVG S+G +ALA+A R+PD L+L+ PA
Sbjct: 79 AALLD----ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQ 134
Query: 242 PLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVL 301
P + +L + + + +L + + +
Sbjct: 135 PAGAAPLAALADLLLGLDAA----AFAALLAALGLLAALAAAARAGLAEALRAPLLGAAA 190
Query: 302 ADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361
A LL + L + L++ D ++P++ ++ +
Sbjct: 191 AAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPND 250
Query: 362 CEPRNFYGHGHFLLLEDGVDLVTIIK 387
G GHF LE +
Sbjct: 251 ARLVVIPGAGHFPHLEAPEAFAAALL 276
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Length = 282 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 9e-06
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL-QSTIPLL 244
+ LVG SLG +AL +AAR+P + ++L L + T+P+L
Sbjct: 58 ERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLTVPVL 108
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 7e-05
Identities = 52/214 (24%), Positives = 80/214 (37%), Gaps = 32/214 (14%)
Query: 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATS 231
SF V +++ V + + P PV+L+G S+G IAL AR P ID + +L +PA
Sbjct: 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGL-VLSSPA-- 141
Query: 232 FNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291
L +L LI + + L + + L DLS+D
Sbjct: 142 -----LGLGGAILRLILAR---LALKLLGRIRPKLPVDS------NLLEGVLTDDLSRDP 187
Query: 292 VALSSYLPVLADILP---KETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 348
+++Y AD L W L A A A+ +L+L G D+++ +
Sbjct: 188 AEVAAY---EADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDN 244
Query: 349 QEEGERLSSALHKCEPR-----NFYGHGHFLLLE 377
E R + Y H LL E
Sbjct: 245 VEGLARFFERAGSPDKELKVIPGAY---HELLNE 275
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Length = 298 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 12/113 (10%)
Query: 135 LLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIP--------VKDRTSFTGLVKLVESTVR 186
++ L G G + L + + +P + S + + +
Sbjct: 1 VVLLHGAGGSAESWRPLAEALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALLD 60
Query: 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS 239
+ PV LVG SLG +ALA AAR P+ L+L++P + +L +
Sbjct: 61 AL----GLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEELLAA 109
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|220638 pfam10230, DUF2305, Uncharacterized conserved protein (DUF2305) | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Query: 133 PLLLFLPGIDGVGLGLIRQ-----HQRLGKIFDIWCL----------HIPVKDRTSFTGL 177
PL+L +PG G+ +G R H++L FD+ + + + S
Sbjct: 3 PLILLIPGNPGL-VGFYRTFLSLLHEKLNPSFDVLGISHAGHTLSPGNNKNERVFSLQDQ 61
Query: 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217
++ +R+ + + L+G S+GA IAL V R
Sbjct: 62 IEHKIDFLRAFLPKKTDVKLILIGHSIGAYIALEVLKRLS 101
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This family of proteins is conserved from plants to humans. The function is unknown. Length = 260 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 45/233 (19%), Positives = 72/233 (30%), Gaps = 30/233 (12%)
Query: 159 FDIWCLHIP---------VKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209
FD+ + F L + +E + + V LVG S+G IA
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDLAEDLE-ALL---DALGLDKVNLVGHSMGGLIA 56
Query: 210 LAVAARNPDIDLVLILVNPATSF-NKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268
LA AA+ PD L+LV S L LL L+ L ++ + G +K
Sbjct: 57 LAYAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIK 116
Query: 269 MA---MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYAN 325
Q + L + L+ + + A
Sbjct: 117 QFQALGRPFVSDFLKQFELSSLIRFGETLALD----GLLGYALGYDLVWDRSAA------ 166
Query: 326 SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 378
L + L++ D L+P E+L++ + GH LE
Sbjct: 167 --LKDIDVPTLIIWGDDDPLVPPD-ASEKLAALFPNAQLVVIDDAGHLAQLEK 216
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This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 172 TSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228
F V+ V V + + P PV+L+G S+GA I++ A +NP++ +IL++P
Sbjct: 74 DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSP 130
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Length = 276 |
| >gnl|CDD|178380 PLN02783, PLN02783, diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 509 MGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKI 568
+G P S N L+ + ++ PGGV+E L+ + + FV++A GA +
Sbjct: 153 LGLDPASRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPL 212
Query: 569 VPFGAVGED 577
VP G+
Sbjct: 213 VPVFCFGQT 221
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Length = 315 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232
K P LVG SLG AL+ A P++ + L+N A F
Sbjct: 151 KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQF 189
|
Length = 354 |
| >gnl|CDD|112781 pfam03982, DAGAT, Diacylglycerol acyltransferase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 510 GAVPVSGINLYKLMS---SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGA 566
G + VS ++ ++ V+L GG EAL ++ L FVR+A GA
Sbjct: 121 GLIEVSRESIEYVLDKCGKGRAVVLVVGGAAEALEAHPGKHTLTLKNRKGFVRIALKTGA 180
Query: 567 KIVPFGAVGEDDL 579
+VP + GE+D+
Sbjct: 181 DLVPVYSFGENDV 193
|
The terminal step of triacylglycerol (TAG) formation is catalyzed by the enzyme diacylglycerol acyltransferase (DAGAT). Length = 297 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 709 | |||
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.97 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.97 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.94 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.94 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 99.94 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 99.93 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.93 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 99.93 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.93 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.93 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.93 | |
| PLN02578 | 354 | hydrolase | 99.93 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.92 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.92 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.92 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.92 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.92 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.92 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.92 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.92 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.92 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.91 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.91 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.91 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.91 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.91 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.91 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.91 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.91 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.9 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.9 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.9 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.9 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.89 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.89 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.89 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.89 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.88 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.88 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.88 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.88 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.88 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.88 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.88 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.87 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.87 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.87 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.86 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.86 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.85 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.85 | |
| PLN02511 | 388 | hydrolase | 99.84 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.84 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.84 | |
| KOG0831 | 334 | consensus Acyl-CoA:diacylglycerol acyltransferase | 99.83 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.83 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.82 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.81 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 99.8 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.8 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.79 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.79 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.78 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.77 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.76 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.75 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.75 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.75 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.74 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.74 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.74 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.74 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.73 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.73 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.71 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.71 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.71 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.7 | |
| PRK10566 | 249 | esterase; Provisional | 99.69 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.68 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.66 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.65 | |
| KOG4321 | 279 | consensus Predicted phosphate acyltransferases [Li | 99.65 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.63 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.61 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.6 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.6 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.6 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.59 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.58 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.57 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.56 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.55 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 99.54 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.53 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.52 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.52 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.52 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.51 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.51 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.5 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.44 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.43 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 99.42 | |
| PLN00021 | 313 | chlorophyllase | 99.4 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.4 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.4 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.4 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.38 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.37 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 99.36 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.36 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 99.35 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.35 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.33 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.33 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.31 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.3 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.3 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.3 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.27 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.27 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.26 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.24 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.24 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.23 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.19 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.16 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.16 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.14 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.13 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.12 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 99.08 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.04 | |
| PRK10115 | 686 | protease 2; Provisional | 99.02 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.0 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 98.99 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.97 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.97 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 98.97 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.97 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.97 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.92 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.92 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.87 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.86 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.86 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.85 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.84 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.82 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.81 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 98.79 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.73 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.72 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 98.71 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.67 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.64 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.61 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.6 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.6 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.58 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.54 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.54 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 98.52 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 98.52 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.5 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.5 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.45 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.44 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.44 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.42 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.39 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.38 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.37 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.37 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.31 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.29 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.29 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.28 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.28 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 98.25 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.24 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.13 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.11 | |
| COG3176 | 292 | Putative hemolysin [General function prediction on | 98.07 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.07 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.05 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 97.99 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.94 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 97.92 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.91 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 97.91 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.89 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.89 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.84 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.83 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 97.77 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 97.7 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.7 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.65 | |
| PF03279 | 295 | Lip_A_acyltrans: Bacterial lipid A biosynthesis ac | 97.63 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.62 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.51 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.48 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.46 | |
| PRK06628 | 290 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.45 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.45 | |
| PRK06553 | 308 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.44 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 97.39 | |
| COG1560 | 308 | HtrB Lauroyl/myristoyl acyltransferase [Cell envel | 97.35 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.35 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.33 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.32 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 97.31 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.22 | |
| PRK08943 | 314 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac | 97.14 | |
| PRK05646 | 310 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.14 | |
| PRK08706 | 289 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.11 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 97.08 | |
| PRK06946 | 293 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.05 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.01 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.98 | |
| PRK08733 | 306 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.96 | |
| TIGR02208 | 305 | lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) | 96.87 | |
| PRK06860 | 309 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.85 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 96.85 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.84 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 96.83 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.77 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.71 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 96.7 | |
| PRK05906 | 454 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.69 | |
| TIGR02207 | 303 | lipid_A_htrB lipid A biosynthesis lauroyl (or palm | 96.69 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.65 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.55 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 96.5 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 96.44 | |
| PRK08734 | 305 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.41 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.39 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.38 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.36 | |
| PRK08025 | 305 | lipid A biosynthesis palmitoleoyl acyltransferase; | 96.33 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 96.28 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.24 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.2 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.18 | |
| PRK08905 | 289 | lipid A biosynthesis lauroyl acyltransferase; Vali | 96.12 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.1 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 96.02 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 95.94 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 95.67 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 95.6 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.57 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 95.55 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 95.52 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 95.31 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 95.1 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 94.92 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 94.89 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 94.72 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 94.6 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 94.52 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 94.43 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 94.4 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 94.31 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 94.29 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 94.1 | |
| PRK05645 | 295 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.02 | |
| PLN02454 | 414 | triacylglycerol lipase | 93.65 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 93.39 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 93.38 | |
| PLN02162 | 475 | triacylglycerol lipase | 92.48 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 92.37 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 91.87 | |
| PLN02310 | 405 | triacylglycerol lipase | 91.82 | |
| PLN02571 | 413 | triacylglycerol lipase | 91.81 | |
| PLN00413 | 479 | triacylglycerol lipase | 91.55 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 91.25 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 91.13 | |
| PLN02934 | 515 | triacylglycerol lipase | 90.99 | |
| PLN02408 | 365 | phospholipase A1 | 90.91 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 90.8 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 90.55 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 90.25 | |
| PLN02847 | 633 | triacylglycerol lipase | 89.8 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.72 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 89.43 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 89.31 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 88.24 | |
| PLN02802 | 509 | triacylglycerol lipase | 88.12 | |
| PLN02753 | 531 | triacylglycerol lipase | 86.91 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 86.85 | |
| PLN02719 | 518 | triacylglycerol lipase | 86.47 | |
| PLN02761 | 527 | lipase class 3 family protein | 86.4 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 86.04 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 85.95 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 85.95 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 85.23 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 83.81 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 81.89 |
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=256.17 Aligned_cols=204 Identities=33% Similarity=0.463 Sum_probs=165.5
Q ss_pred Cc-eeeccCCCCCCCCeEEEeccccchhhHHhhHHH-HHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccc
Q 005190 437 GK-IVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPE-FMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514 (709)
Q Consensus 437 ~~-~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v 514 (709)
+. +|+|.||+|.++|+|+|+||+++.+|.+++... .....++.++++++..+|..+ .++++++.+|++++
T Consensus 6 ~~~~v~g~e~lp~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p--------~~~~~~~~~g~i~~ 77 (212)
T cd07987 6 RVYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLP--------GLRDLLRRLGAVPG 77 (212)
T ss_pred eeEEEeccccCCCCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCc--------cHHHHHHHcCCccc
Confidence 45 899999999999999999999774599888776 334456889999999999773 38999999999999
Q ss_pred cHHHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccccccCcc
Q 005190 515 SGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPY 594 (709)
Q Consensus 515 ~~~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~~ 594 (709)
+|+++.++|++|.+|+|||||+|+........+...+++|+||++||+++|+|||||+++|+++.+....+... . .
T Consensus 78 ~r~~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~---~-~ 153 (212)
T cd07987 78 SRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDG---P-V 153 (212)
T ss_pred CHHHHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCC---C-c
Confidence 99999999999999999999999987754455666779999999999999999999999999998766544221 0 0
Q ss_pred chHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHHHHHHH
Q 005190 595 FKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLA 674 (709)
Q Consensus 595 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~ 674 (709)
+. .....+| +|. ++++.++||+||+++....+.++++++++++++++++|+++++
T Consensus 154 ~~----------------------~~~~~l~--~p~-~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 208 (212)
T cd07987 154 GK----------------------RLFRLLP--LPR-RLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELIE 208 (212)
T ss_pred ee----------------------ehhceec--cCC-CCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001122 344 5789999999999986545567899999999999999999998
Q ss_pred HHH
Q 005190 675 YLK 677 (709)
Q Consensus 675 ~l~ 677 (709)
+++
T Consensus 209 ~~~ 211 (212)
T cd07987 209 KHK 211 (212)
T ss_pred Hhc
Confidence 765
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. |
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=263.45 Aligned_cols=217 Identities=18% Similarity=0.197 Sum_probs=166.7
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHH-HHHHhc-ceEeeeccccccccccCCCCCCCChHHHHHHhcCccc
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPE-FMIESN-ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~-~~~~~~-~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v 514 (709)
+++++|.||+|+++++|+++||++. +|..++... .....+ +.+++++++.+|+.|+ ++++++++|++|+
T Consensus 88 ~v~v~g~e~l~~~~~~I~~~nH~S~-ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~--------~g~~~~~~G~ipv 158 (315)
T PLN02783 88 RLHVEDEEAFDPNRAYVFGYEPHSV-LPIGVIALADLSGFLPLPKIRALASSAVFYTPF--------LRHIWTWLGLDPA 158 (315)
T ss_pred EEEEEchhhCCCCCCEEEEECCCcc-hhhHHHhhhhhhhccCCCchHHHhhhhhccCcH--------HHHHHHHcCCeEE
Confidence 5678999999999999999999954 365443221 122233 6789999999998855 8999999999999
Q ss_pred cHHHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccccccCcc
Q 005190 515 SGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPY 594 (709)
Q Consensus 515 ~~~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~~ 594 (709)
+|+++.++|++|.+|+|||||+||+.+.........+++|+||+++|+++|+|||||+++|+++.|+++.... ++
T Consensus 159 ~R~~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~~~~~~~~~~-----~~ 233 (315)
T PLN02783 159 SRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTRAYKWWKPGG-----PL 233 (315)
T ss_pred cHHHHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchhhhhhhcCCc-----cH
Confidence 9999999999999999999999998765545555667999999999999999999999999999987653321 12
Q ss_pred chHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHHHHHHH
Q 005190 595 FKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLA 674 (709)
Q Consensus 595 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~ 674 (709)
+..+-+.+ + ..+...-+.+.+| +|. +.+++++||+||+++.. ..++++++++++++++++|+++++
T Consensus 234 ~~~l~r~~-------~--~~p~~~wg~~~~p--iP~-~~~i~vvvG~PI~v~~~--~~~~~e~v~~~~~~~~~al~~L~~ 299 (315)
T PLN02783 234 VPKLSRAI-------G--FTPIVFWGRYGSP--IPH-RTPMHVVVGKPIEVKKN--PQPSQEEVAEVLEQFVEALQDLFE 299 (315)
T ss_pred HHHHHHhc-------C--cCceeeecccCcc--cCC-CceEEEEecCCccCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22111111 1 1111122233333 555 78999999999999843 346889999999999999999999
Q ss_pred HHHHHhc
Q 005190 675 YLKEKRE 681 (709)
Q Consensus 675 ~l~~~r~ 681 (709)
+++.+..
T Consensus 300 ~~k~~~g 306 (315)
T PLN02783 300 KHKARAG 306 (315)
T ss_pred HHHHhcC
Confidence 9998764
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=229.68 Aligned_cols=238 Identities=17% Similarity=0.192 Sum_probs=148.9
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCC
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPK 194 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~ 194 (709)
.|.+.|+ +.|+|||+||+++++..|..+.+.|.+.|+|+++|+||||.| +.+++++++.+ ...
T Consensus 5 ~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~--------~~~ 73 (256)
T PRK10349 5 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ--------QAP 73 (256)
T ss_pred chhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh--------cCC
Confidence 3555665 445799999999999999999999988899999999999998 34444444332 235
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhh-hHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQST-IPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
++++|+||||||.+|+.+|.++|++++++|++++........ +... ..........+..........+.. ..
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 147 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA------LQ 147 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH------HH
Confidence 789999999999999999999999999999998854332111 0000 000000000000000000000000 00
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCC-hhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILP-KETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~ 351 (709)
.. .................. .... ...+........ ..+..+.+.++++|+|+|+|++|.+++.+.
T Consensus 148 ~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 214 (256)
T PRK10349 148 TM-GTETARQDARALKKTVLA---------LPMPEVDVLNGGLEILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRKV- 214 (256)
T ss_pred Hc-cCchHHHHHHHHHHHhhc---------cCCCcHHHHHHHHHHHH--hCccHHHHhhcCCCeEEEecCCCccCCHHH-
Confidence 00 000000000000000000 0000 011111111111 122346678899999999999999999986
Q ss_pred HHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 352 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 352 ~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
++.+.+.++++++++++++||++++|+|+.|++.|.+
T Consensus 215 ~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 215 VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 8899999999999999999999999999999999994
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=234.24 Aligned_cols=251 Identities=14% Similarity=0.177 Sum_probs=157.5
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------------CHHHHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------------SFTGLVKLVESTV 185 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------------s~~~~~~dl~~~l 185 (709)
++|.+.|+ ++|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++++.+++
T Consensus 20 i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l 96 (294)
T PLN02824 20 IRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFC 96 (294)
T ss_pred EEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHH
Confidence 45666664 257899999999999999999999998899999999999987 2478899999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcch-hhhhhh-hHHHhhchhhhH-HhH-HHhhhh
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK-SVLQST-IPLLELIPGQIT-TML-SSTLSL 261 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~ 261 (709)
++ .+.++++|+||||||.+++.+|.++|++|+++|++++...... ...... .+....+..... ... ..++..
T Consensus 97 ~~----l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
T PLN02824 97 SD----VVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKS 172 (294)
T ss_pred HH----hcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHh
Confidence 87 4467899999999999999999999999999999998542111 000000 000000000000 000 000000
Q ss_pred hcCchhhhHHHHHhhccCC-chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEe
Q 005190 262 MTGDPLKMAMDNVAKRLSL-QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLC 339 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~ 339 (709)
. ..... ....+...... ............. .............++... .......+.++++|+|+|+
T Consensus 173 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 241 (294)
T PLN02824 173 V-ATPET-VKNILCQCYHDDSAVTDELVEAILR---------PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAW 241 (294)
T ss_pred h-cCHHH-HHHHHHHhccChhhccHHHHHHHHh---------ccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEE
Confidence 0 00000 00000000000 0000000000000 000111111111111100 1112345788999999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|++|.+++.+. ++.+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 242 G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 242 GEKDPWEPVEL-GRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred ecCCCCCChHH-HHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 99999999986 88888888889999999999999999999999999943
|
|
| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=230.42 Aligned_cols=228 Identities=21% Similarity=0.241 Sum_probs=171.2
Q ss_pred eeeccCCCCCCCCeEEEeccc--cchhhHHhhHH----HHHHH-hcceEeeeccccccccccCCCCCCCChHHHHHHhcC
Q 005190 439 IVRGLSGIPSEGPVLFVGYHN--LLGLDVLTLIP----EFMIE-SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGA 511 (709)
Q Consensus 439 ~~~g~e~ip~~~p~i~v~NH~--~~~~d~~~~~~----~~~~~-~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~ 511 (709)
++...+.++++..+|| +.|+ .+++...+... .+... .+...+.++...+|..|+ +|+++.++|+
T Consensus 52 ~l~~~~~l~p~~~Yif-~~hPHGvl~~g~~~~f~t~~~~~~~~fpg~~~~~~tl~~~f~~P~--------~R~~~~~~G~ 122 (297)
T PF03982_consen 52 RLVKTADLDPDKNYIF-GFHPHGVLPIGAFVNFATDATGFSKLFPGIRPHLLTLSVNFRIPF--------FRDFLLWLGA 122 (297)
T ss_pred EEEecccCCcCCceEE-eeCCCccccCcchhcccccccCcchhCCCcceeEEEeccceeccc--------cchhhhhccc
Confidence 4555677999888888 5676 44444322211 12222 234567777778887744 9999999999
Q ss_pred ccccHHHHHHHhcC---CCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccc
Q 005190 512 VPVSGINLYKLMSS---KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYND 588 (709)
Q Consensus 512 i~v~~~~~~~~L~~---g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~ 588 (709)
++++|+++..+|++ |++|+|+|||.+|++......+.+.|+.|+||+|+|+++|+|||||+.+||+|+|..+.+...
T Consensus 123 ~~~sr~s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE~d~~~~~~~~~~ 202 (297)
T PF03982_consen 123 VSASRESIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGENDLYDQVQNPPG 202 (297)
T ss_pred ccccccccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCChhheeeccCCch
Confidence 99999999999987 456999999999999988899999999999999999999999999999999999887755431
Q ss_pred cccCccchHHHHHHHhhhhhccccccccccCcccccC----ccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHH
Q 005190 589 QMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP----YPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLE 664 (709)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p----~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~ 664 (709)
..+.+++.++++.. ++..-+..++..++ |++|. +.+++++||+||+++ +.+.+++|+++++|++
T Consensus 203 -~~~r~~q~~~~~~~--------g~~~~~f~Grg~f~~~~~gllP~-r~pi~~VVG~PI~v~--~~~~Pt~e~Vd~~H~~ 270 (297)
T PF03982_consen 203 -SWLRRFQRWLKKKF--------GFSLPLFWGRGIFPSYSFGLLPY-RRPITTVVGKPIPVP--KIENPTQEDVDKLHAR 270 (297)
T ss_pred -hHHHHHHHHHHHHc--------CcceeeeecccccCCCccccccc-CCceEEEeeceeccc--CCCCcCHHHHHHHHHH
Confidence 11112233333221 22333334443333 66787 789999999999998 4577899999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC
Q 005190 665 IKSEVEKCLAYLKEKRENDPYRN 687 (709)
Q Consensus 665 v~~~i~~~~~~l~~~r~~~~~~~ 687 (709)
+.++++++++++|.+...++...
T Consensus 271 Y~~~L~~LFd~~K~~~g~~~d~~ 293 (297)
T PF03982_consen 271 YIEALRELFDKHKAKYGYPPDTK 293 (297)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCe
Confidence 99999999999999987555443
|
; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=224.15 Aligned_cols=174 Identities=15% Similarity=0.173 Sum_probs=138.0
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG 516 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~ 516 (709)
+++++|.||+|.++|+|+|+||+++ +|.+++... ......+++++.+|+.|+ ++++++.+|++||+|
T Consensus 52 ~v~v~g~e~~p~~~~~IivaNH~S~-lD~~~l~~~----~~~~~~fvaK~el~~~P~--------~g~~~~~~g~i~VdR 118 (245)
T PRK15018 52 KVECRKPADAESYGNAIYIANHQNN-YDMVTASNI----VQPPTVTVGKKSLLWIPF--------FGQLYWLTGNLLIDR 118 (245)
T ss_pred EEEEEccCCCCCCCCEEEEECCCch-HHHHHHHHH----hCCCcEEEEeHHHhhCCH--------HHHHHHhCCCeEEeC
Confidence 5678999999999999999999976 698766544 234467899999998754 788999999999998
Q ss_pred HH----------HHHHhc-CCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcC
Q 005190 517 IN----------LYKLMS-SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLD 585 (709)
Q Consensus 517 ~~----------~~~~L~-~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~ 585 (709)
++ +.+.++ +|.+++|||||||+. ..++. +||+|++++|.++|+|||||++.|..+.+
T Consensus 119 ~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~------~g~l~-~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~----- 186 (245)
T PRK15018 119 NNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSR------GRGLL-PFKTGAFHAAIAAGVPIIPVCVSTTSNKI----- 186 (245)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCC------CCCCC-CccHHHHHHHHHcCCCEEEEEEECccccc-----
Confidence 53 233454 477899999999952 33455 99999999999999999999999876541
Q ss_pred ccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHH
Q 005190 586 YNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEI 665 (709)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v 665 (709)
+. ....++++.+.||+||+++++ ..++.+++.+++
T Consensus 187 ---------------------------------------~~-~~~~~g~i~v~~~~PI~~~~~-----~~~~~~~l~~~v 221 (245)
T PRK15018 187 ---------------------------------------NL-NRLHNGLVIVEMLPPIDVSQY-----GKDQVRELAAHC 221 (245)
T ss_pred ---------------------------------------cc-CCccCeeEEEEEcCCCcCCCC-----ChhhHHHHHHHH
Confidence 10 001268899999999999876 345678999999
Q ss_pred HHHHHHHHHHHHHHh
Q 005190 666 KSEVEKCLAYLKEKR 680 (709)
Q Consensus 666 ~~~i~~~~~~l~~~r 680 (709)
++.|++.++++..+.
T Consensus 222 ~~~i~~~~~~l~~~~ 236 (245)
T PRK15018 222 RSIMEQKIAELDKEV 236 (245)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888887654
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=228.42 Aligned_cols=231 Identities=18% Similarity=0.175 Sum_probs=152.0
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+.++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++++.+++++ .+.++++|+|||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~----l~~~~~~LvG~S 99 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY----LDYGQVNAIGVS 99 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH----hCcCceEEEEEC
Confidence 456899999999999999999999988999999999999998 578999999999988 445789999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC-Cch
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS-LQP 282 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 282 (709)
|||.+|+.+|.++|++|+++|+++++.......... .......... . ......... ........... ...
T Consensus 100 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~-~----~~~~~~~~~--~~~~~~~~~~~~~~~ 170 (276)
T TIGR02240 100 WGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP--KVLMMMASPR-R----YIQPSHGIH--IAPDIYGGAFRRDPE 170 (276)
T ss_pred HHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch--hHHHHhcCch-h----hhccccccc--hhhhhccceeeccch
Confidence 999999999999999999999999865421111000 0000000000 0 000000000 00000000000 000
Q ss_pred HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc
Q 005190 283 TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 362 (709)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~ 362 (709)
........ . .......................+.++++|+|+|+|++|++++++. .+.+.+.++++
T Consensus 171 ~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~-~~~l~~~~~~~ 236 (276)
T TIGR02240 171 LAMAHASK----------V---RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLIN-MRLLAWRIPNA 236 (276)
T ss_pred hhhhhhhh----------c---ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHH-HHHHHHhCCCC
Confidence 00000000 0 0000000111111111111224578899999999999999999997 89999999999
Q ss_pred EEEEEcCCCccccccChhhHHHHHhhc
Q 005190 363 EPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 363 ~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++ ||++++|+|+++++.|.+|
T Consensus 237 ~~~~i~~-gH~~~~e~p~~~~~~i~~f 262 (276)
T TIGR02240 237 ELHIIDD-GHLFLITRAEAVAPIIMKF 262 (276)
T ss_pred EEEEEcC-CCchhhccHHHHHHHHHHH
Confidence 9999985 9999999999999999944
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=212.46 Aligned_cols=177 Identities=20% Similarity=0.227 Sum_probs=143.4
Q ss_pred ccCCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcc
Q 005190 434 LANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 513 (709)
Q Consensus 434 ~~~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~ 513 (709)
.+.+++|+|.||+|+++|+|+|+|||+. +|...|... .+.....+++..|+..|+ +++.+..+|.|+
T Consensus 73 ~g~r~ev~g~E~L~~~~p~ViVsNHQS~-LDil~m~~i----~p~~cvviaKr~L~yvp~--------~gl~m~L~gvvf 139 (276)
T KOG2848|consen 73 LGLRFEVRGEENLPKSKPAVIVSNHQSS-LDILGMGSI----WPKNCVVIAKRSLFYVPI--------FGLAMYLSGVVF 139 (276)
T ss_pred cceEEEEechhhCCccCCeEEEecchhH-HHHHHHHhh----cCCceEEEEeeeeeecch--------HHHHHHHcCceE
Confidence 4558899999999999999999999975 699888777 456699999999997633 666899999999
Q ss_pred ccHHH----------H-HHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhh
Q 005190 514 VSGIN----------L-YKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQI 582 (709)
Q Consensus 514 v~~~~----------~-~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~ 582 (709)
++|.+ + .++.+++..|+||||||| +.+..+. |||+|++.+|.++++|||||.+.+..++|
T Consensus 140 IdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTR------n~~g~ll-PFKKGAF~lAvqaqVPIVPvv~ssy~~f~-- 210 (276)
T KOG2848|consen 140 IDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTR------NKEGRLL-PFKKGAFHLAVQAQVPIVPVVFSSYGDFY-- 210 (276)
T ss_pred EecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCcc------CCCCccc-ccccceeeeehhcCCCEEEEEEecccccc--
Confidence 99943 2 233455689999999999 3455666 99999999999999999999997755541
Q ss_pred hcCccccccCccchHHHHHHHhhhhhccccccccccCcccccC-ccCCCCCceEEEEecCccccCCcccccCCHHHHHHH
Q 005190 583 VLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-YPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHEL 661 (709)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~ 661 (709)
-+ +-.-. .+.+.|.+.+||+++++ ++++++++
T Consensus 211 -----------------------------------------~~~~k~f~-sG~v~V~vL~pI~Tegl-----T~ddv~~L 243 (276)
T KOG2848|consen 211 -----------------------------------------STKEKVFN-SGNVIVRVLPPIPTEGL-----TKDDVDVL 243 (276)
T ss_pred -----------------------------------------cCccceee-cceEEEEEcCCCCccCC-----CcccHHHH
Confidence 11 00011 48899999999999988 78999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005190 662 YLEIKSEVEKCLAYLKEK 679 (709)
Q Consensus 662 ~~~v~~~i~~~~~~l~~~ 679 (709)
.++++++|.+.+++.-..
T Consensus 244 ~~~~R~~M~~~~~ei~~~ 261 (276)
T KOG2848|consen 244 SDECRSAMLETFKEISAE 261 (276)
T ss_pred HHHHHHHHHHHHHHhchh
Confidence 999999999998876543
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-25 Score=228.81 Aligned_cols=249 Identities=17% Similarity=0.151 Sum_probs=155.3
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHH
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRS 187 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~ 187 (709)
.-++|.+.|.+ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.+++++
T Consensus 34 ~~i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 34 LRMHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred EEEEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 45677777764 46789999999999999999999996 6899999999999998 357888899988887
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHH-hHHHhhhhhcCch
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITT-MLSSTLSLMTGDP 266 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 266 (709)
.+.++++|+||||||.+|+.+|.++|+.|+++|++++...............+......... .....+.......
T Consensus 112 ----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (302)
T PRK00870 112 ----LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRD 187 (302)
T ss_pred ----cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhcccccc
Confidence 45678999999999999999999999999999999875332211000000000000000000 0000000000000
Q ss_pred hhh-HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 267 LKM-AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 267 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
... ....+...... .......... ..+.......... .........+.++++|+++|+|++|++
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~l~~i~~P~lii~G~~D~~ 252 (302)
T PRK00870 188 LSDAVRAAYDAPFPD-ESYKAGARAF-------PLLVPTSPDDPAV-------AANRAAWAVLERWDKPFLTAFSDSDPI 252 (302)
T ss_pred CCHHHHHHhhcccCC-hhhhcchhhh-------hhcCCCCCCCcch-------HHHHHHHHhhhcCCCceEEEecCCCCc
Confidence 000 00000000000 0000000000 0000000000000 000111245688999999999999999
Q ss_pred CCcHHHHHHHHhhcCCcE---EEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLSSALHKCE---PRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~~~~~~~~---~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.. .+.+.+.+++++ +++++++||++++|+|+++++.|.+|
T Consensus 253 ~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 297 (302)
T PRK00870 253 TGGG--DAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEF 297 (302)
T ss_pred ccCc--hHHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHH
Confidence 9976 478888888776 88999999999999999999999954
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=222.39 Aligned_cols=233 Identities=14% Similarity=0.112 Sum_probs=147.6
Q ss_pred EEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCC-CCEEEEEec
Q 005190 134 LLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPK-RPVYLVGES 203 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~-~~v~LvGhS 203 (709)
.|||+||++++...|..+++.| +.+|+|+++|+||||.| +++++++|+.++++. ++. ++++|+|||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~~lvGhS 80 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSD----LPPDHKVILVGHS 80 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHh----cCCCCCEEEEecC
Confidence 4999999999999999999999 67899999999999988 468889999999987 433 589999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCch
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (709)
|||.+++.+|.++|++|+++|++++........ ............. .....+........... .....
T Consensus 81 mGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-------~~~~~ 149 (255)
T PLN02965 81 IGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEK----IWDYTFGEGPDKPPTGI-------MMKPE 149 (255)
T ss_pred cchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhcccc----ceeeeeccCCCCCcchh-------hcCHH
Confidence 999999999999999999999998853211100 0000000000000 00000000000000000 00000
Q ss_pred HHHHH-HHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC
Q 005190 283 TIQDL-SQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361 (709)
Q Consensus 283 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~ 361 (709)
..... +.+. ..... .................. ......+..+++|+++|+|++|.++++.. .+.+++.+++
T Consensus 150 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~vP~lvi~g~~D~~~~~~~-~~~~~~~~~~ 221 (255)
T PLN02965 150 FVRHYYYNQS-PLEDY-TLSSKLLRPAPVRAFQDL-----DKLPPNPEAEKVPRVYIKTAKDNLFDPVR-QDVMVENWPP 221 (255)
T ss_pred HHHHHHhcCC-CHHHH-HHHHHhcCCCCCcchhhh-----hhccchhhcCCCCEEEEEcCCCCCCCHHH-HHHHHHhCCc
Confidence 00000 0000 00000 000000000000000000 01112445789999999999999999997 9999999999
Q ss_pred cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 362 CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++++||++++|+|+++++.|.++
T Consensus 222 a~~~~i~~~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 222 AQTYVLEDSDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred ceEEEecCCCCchhhcCHHHHHHHHHHH
Confidence 9999999999999999999999999965
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-25 Score=227.88 Aligned_cols=250 Identities=13% Similarity=0.086 Sum_probs=152.6
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccC
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~ 192 (709)
++|.+.|+ +++|||+||++++...|..+++.|++.++|+++|+||||.| +++++++|+.+++++ .
T Consensus 19 i~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~----l 90 (295)
T PRK03592 19 MAYIETGE----GDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA----L 90 (295)
T ss_pred EEEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h
Confidence 45666665 57899999999999999999999987889999999999999 678899999999988 4
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hh-hhhHHHhhchhhh--HHhH---HHhhhhhcCc
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQ-STIPLLELIPGQI--TTML---SSTLSLMTGD 265 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~-~~~~~~~~~~~~~--~~~~---~~~~~~~~~~ 265 (709)
+.++++++||||||.+|+.+|.++|++|+++|++++........ .. ........+.... .... ..........
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPG 170 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccC
Confidence 55789999999999999999999999999999999843221100 00 0000111000000 0000 0000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhh---hhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVL---ADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
. ....... +....+....... ...... ............ .. .........+.++++|+|+|+|++
T Consensus 171 ~-------~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~~i~~P~lii~G~~ 238 (295)
T PRK03592 171 S-------ILRPLSD-EEMAVYRRPFPTP-ESRRPTLSWPRELPIDGEPAD--VV-ALVEEYAQWLATSDVPKLLINAEP 238 (295)
T ss_pred c-------ccccCCH-HHHHHHHhhcCCc-hhhhhhhhhhhhcCCCCcchh--hH-hhhhHhHHHhccCCCCeEEEeccC
Confidence 0 0000000 0000000000000 000000 000000000000 00 000112245678999999999999
Q ss_pred CCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 343 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|.++++....+.+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 239 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 285 (295)
T PRK03592 239 GAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAW 285 (295)
T ss_pred CcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHH
Confidence 99995554244445567899999999999999999999999999944
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-24 Score=227.44 Aligned_cols=251 Identities=15% Similarity=0.160 Sum_probs=157.1
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccC
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~ 192 (709)
++|.+.|+ +|+|||+||++++...|..+.+.|+++|+|+++|+||||.| +.+++++++.++++.+
T Consensus 78 i~Y~~~g~----g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~---- 149 (354)
T PLN02578 78 IHYVVQGE----GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV---- 149 (354)
T ss_pred EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh----
Confidence 45666664 56799999999999999999999998999999999999998 5577888899888873
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh------HHHhh-chhhhHHhHHHhhhh----
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI------PLLEL-IPGQITTMLSSTLSL---- 261 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~---- 261 (709)
..++++++||||||.+|+.+|.++|++++++|++++...+......... ..... ...............
T Consensus 150 ~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T PLN02578 150 VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW 229 (354)
T ss_pred ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999886543321110000 00000 000000000000000
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-----hhhHhhhhcccCCccEE
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-----ASAYANSRLHAVKAQML 336 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~PvL 336 (709)
....+.... ..................+... ...............+.. ......+.+.++++|++
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 300 (354)
T PLN02578 230 QAKQPSRIE-SVLKSVYKDKSNVDDYLVESIT--------EPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLL 300 (354)
T ss_pred HhcCHHHHH-HHHHHhcCCcccCCHHHHHHHH--------hcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEE
Confidence 000000000 0000000000000000000000 000011111111111111 01123456788999999
Q ss_pred EEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 337 VLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 337 vi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|+|++|.+++.+. ++.+.+.+++++++++ ++||++++|+|+++++.|.+|
T Consensus 301 iI~G~~D~~v~~~~-~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 301 LLWGDLDPWVGPAK-AEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred EEEeCCCCCCCHHH-HHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHH
Confidence 99999999999996 9999999999999999 589999999999999999965
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-24 Score=217.08 Aligned_cols=232 Identities=13% Similarity=0.124 Sum_probs=152.4
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
.++|+|||+||++++...|..++..|+++|+|+++|+||||.| +++++++|+.+++++ .+.++++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~----l~~~~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA----LQIEKATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH----cCCCceEEEEEC
Confidence 3578899999999999999999999999999999999999988 779999999999988 445689999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
|||.+|+.+|.++|++|+++|++++......... ....+.. +........ ................ ..
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~-~~ 157 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR--HDEIFAA--------INAVSEAGA-TTRQQAAAIMRQHLNE-EG 157 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccchh--hHHHHHH--------HHHhhhccc-ccHHHHHHHHHHhcCC-HH
Confidence 9999999999999999999999976432211000 0000000 000000000 0000000000000000 00
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcE
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE 363 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~ 363 (709)
...+...... ........... + .... .....+.+..+++|+|+|+|++|.+++.+. .+.+.+.+++++
T Consensus 158 ~~~~~~~~~~------~~~~~~~~~~~-~--~~~~--~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~ 225 (255)
T PRK10673 158 VIQFLLKSFV------DGEWRFNVPVL-W--DQYP--HIVGWEKIPAWPHPALFIRGGNSPYVTEAY-RDDLLAQFPQAR 225 (255)
T ss_pred HHHHHHhcCC------cceeEeeHHHH-H--HhHH--HHhCCcccCCCCCCeEEEECCCCCCCCHHH-HHHHHHhCCCcE
Confidence 0000000000 00000000000 0 0000 011123467789999999999999999986 999999999999
Q ss_pred EEEEcCCCccccccChhhHHHHHhhc
Q 005190 364 PRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 364 ~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++||++++|+|+++++.|.+|
T Consensus 226 ~~~~~~~gH~~~~~~p~~~~~~l~~f 251 (255)
T PRK10673 226 AHVIAGAGHWVHAEKPDAVLRAIRRY 251 (255)
T ss_pred EEEeCCCCCeeeccCHHHHHHHHHHH
Confidence 99999999999999999999999954
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=228.17 Aligned_cols=254 Identities=17% Similarity=0.178 Sum_probs=154.1
Q ss_pred cccccCCCC--CCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhh
Q 005190 120 FSPLECGSH--TRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 120 ~~~~~~g~p--~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~ 189 (709)
++|.+.|+. .+++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.
T Consensus 74 i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~-- 151 (360)
T PLN02679 74 INYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE-- 151 (360)
T ss_pred EEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH--
Confidence 456666641 12357899999999999999999999988999999999999988 457888899998887
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHH-hCCCceeEEEEecCCCCcchhhhhhhhHHHhhchh--hhHH------hHHHhhh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAA-RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG--QITT------MLSSTLS 260 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~-~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~ 260 (709)
...++++|+||||||.+++.+|. .+|++|+++|++++...................+. .... ....++.
T Consensus 152 --l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 152 --VVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred --hcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 44678999999999999999887 47999999999998653321110000000000000 0000 0000000
Q ss_pred hhcCch-hhhHHHHHh-hccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-hhhHhhhhcccCCccEEE
Q 005190 261 LMTGDP-LKMAMDNVA-KRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLV 337 (709)
Q Consensus 261 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLv 337 (709)
...... +........ ......+.....+... ................ ........+.++++|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLi 297 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGNKEAVDDELVEIIRGP------------ADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILV 297 (360)
T ss_pred HhcCHHHHHHHHHHhccCcccCCHHHHHHHHhh------------ccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEE
Confidence 000000 000000000 0000000000000000 0011111111111110 011123456789999999
Q ss_pred EeeCCCCCCCcHH----HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 338 LCSGKDQLMPSQE----EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 338 i~G~~D~~v~~~~----~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|+|++|.++|.+. ..+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 298 i~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~F 353 (360)
T PLN02679 298 LWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPW 353 (360)
T ss_pred EEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHH
Confidence 9999999998863 124566778999999999999999999999999999954
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=218.24 Aligned_cols=244 Identities=20% Similarity=0.209 Sum_probs=157.3
Q ss_pred cccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCC
Q 005190 122 PLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSP 193 (709)
Q Consensus 122 ~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~ 193 (709)
|...|.+.+++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.+++++ .+
T Consensus 3 ~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~----~~ 78 (257)
T TIGR03611 3 YELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA----LN 78 (257)
T ss_pred EEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH----hC
Confidence 444555445688999999999999999999999988999999999999988 568888999999887 34
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
.++++++||||||++|+.+|..+|+.++++|++++................. ++..............
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 146 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIA------------LLQHAGPEAYVHAQAL 146 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHH------------HHhccCcchhhhhhhh
Confidence 5789999999999999999999999999999998755432111100000000 0000000000000000
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 353 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~ 353 (709)
. .....+........... ....................+. .......+.++++|+++++|++|.+++++. ++
T Consensus 147 ~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~ 218 (257)
T TIGR03611 147 F---LYPADWISENAARLAAD--EAHALAHFPGKANVLRRINALE--AFDVSARLDRIQHPVLLIANRDDMLVPYTQ-SL 218 (257)
T ss_pred h---hccccHhhccchhhhhh--hhhcccccCccHHHHHHHHHHH--cCCcHHHhcccCccEEEEecCcCcccCHHH-HH
Confidence 0 00000000000000000 0000000001111111111111 112235567889999999999999999997 88
Q ss_pred HHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 354 RLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 354 ~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+.+.+++++++.++++||++++++|+++++.|.+|
T Consensus 219 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 254 (257)
T TIGR03611 219 RLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDF 254 (257)
T ss_pred HHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHH
Confidence 999999999999999999999999999999999954
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=230.82 Aligned_cols=266 Identities=12% Similarity=0.180 Sum_probs=154.1
Q ss_pred ccccccCCCCC-CCCCEEEEeCCCCCCcccHHH-HHHHhc----CCceEEEEeCCCCCCC--------CHHHHHHHHH-H
Q 005190 119 WFSPLECGSHT-RDSPLLLFLPGIDGVGLGLIR-QHQRLG----KIFDIWCLHIPVKDRT--------SFTGLVKLVE-S 183 (709)
Q Consensus 119 ~~~~~~~g~p~-~~~p~Vv~lHG~~~s~~~~~~-~~~~L~----~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~-~ 183 (709)
-++|...|++. +.+|+|||+||++++...|.. +.+.|+ ++|+|+++|+||||.| +++++++++. .
T Consensus 187 ~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ 266 (481)
T PLN03087 187 SLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERS 266 (481)
T ss_pred EEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHH
Confidence 34455555432 235789999999999999985 446664 6899999999999988 4577777774 6
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhc-hhhh------HHhHH
Q 005190 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQI------TTMLS 256 (709)
Q Consensus 184 ~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~ 256 (709)
+++. .+.++++++||||||.+|+.+|.++|++|+++|++++................... +... .....
T Consensus 267 ll~~----lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (481)
T PLN03087 267 VLER----YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVA 342 (481)
T ss_pred HHHH----cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHH
Confidence 6666 56789999999999999999999999999999999975432211110000000000 0000 00000
Q ss_pred HhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH----hhhHhhhhcccCC
Q 005190 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA----ASAYANSRLHAVK 332 (709)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~ 332 (709)
.++.... ..... .........+....+......................+......... ........+.+++
T Consensus 343 ~w~~~~~-~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~ 418 (481)
T PLN03087 343 CWYEHIS-RTICL---VICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLK 418 (481)
T ss_pred HHHHHHH-hhhhc---ccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCC
Confidence 0000000 00000 00000000000000000000000000000000000011111011100 0111122334789
Q ss_pred ccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccc-cChhhHHHHHhhccccccc
Q 005190 333 AQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL-EDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 333 ~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~l-e~p~~~~~~I~~~~f~~r~ 395 (709)
+|+|+|+|++|.++|++. .+.+++.+|++++++++++||++++ |+|+++++.|. .|++++
T Consensus 419 vPtLII~Ge~D~ivP~~~-~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~--~F~~~~ 479 (481)
T PLN03087 419 CDVAIFHGGDDELIPVEC-SYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELE--EIWRRS 479 (481)
T ss_pred CCEEEEEECCCCCCCHHH-HHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHH--HHhhcc
Confidence 999999999999999997 9999999999999999999999985 99999999999 677665
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-24 Score=219.27 Aligned_cols=239 Identities=15% Similarity=0.091 Sum_probs=148.3
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~ 191 (709)
++|...|. +|+|||+||++.+...|..+.+.|.++|+|+++|+||||.| +.+++++++.+++++
T Consensus 26 i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---- 97 (286)
T PRK03204 26 IHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH---- 97 (286)
T ss_pred EEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH----
Confidence 45666664 57899999999988999999999998899999999999988 346777888877776
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhhhHHHhhchhhhHHhH--HHhhhhhcCchhh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTML--SSTLSLMTGDPLK 268 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 268 (709)
.+.++++++||||||.+|+.+|..+|++|+++|++++........ ...........+.. .... ......+....
T Consensus 98 ~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 174 (286)
T PRK03204 98 LGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQ-YAILRRNFFVERLIPAG-- 174 (286)
T ss_pred hCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccch-hhhhhhhHHHHHhcccc--
Confidence 556789999999999999999999999999999988754211100 00000000000000 0000 00000000000
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHH-H---Hhh---hHhhhhccc--CCccEEEEe
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELL-K---AAS---AYANSRLHA--VKAQMLVLC 339 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~---~~~~~~l~~--i~~PvLvi~ 339 (709)
....... .... .+. ..............+ . ... ......+.+ +++|+|+|+
T Consensus 175 -----~~~~~~~-~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~ 234 (286)
T PRK03204 175 -----TEHRPSS-AVMA-HYR-------------AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVW 234 (286)
T ss_pred -----ccCCCCH-HHHH-Hhc-------------CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEe
Confidence 0000000 0000 000 000000000000000 0 000 000011111 289999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|++|.++++....+.+.+.+|+.++++++++||++++|+|+++++.|.+|
T Consensus 235 G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~ 284 (286)
T PRK03204 235 GMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIER 284 (286)
T ss_pred cCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHh
Confidence 99999987654378899999999999999999999999999999999943
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=208.33 Aligned_cols=216 Identities=23% Similarity=0.300 Sum_probs=147.8
Q ss_pred EEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 135 LLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 135 Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++ ...++++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA----LGIKKVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH----TTTSSEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc----cccccccccccccc
Confidence 79999999999999999999999999999999999998 467888999999888 44478999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEecCCCCcchhhh-hhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHH
Q 005190 206 ACIALAVAARNPDIDLVLILVNPATSFNKSVL-QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (709)
Q Consensus 206 G~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (709)
|.+++.+|.++|+.|+++|+++|......... .....++..+..........+. . ..+.... .....
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~-~~~~~ 144 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA----S-------RFFYRWF-DGDEP 144 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH----H-------HHHHHHH-THHHH
T ss_pred cccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccc----c-------ccccccc-ccccc
Confidence 99999999999999999999999765432210 0000111111100000000000 0 0000000 00000
Q ss_pred HHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH--hhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc
Q 005190 285 QDLSQDLVALSSYLPVLADILPKETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 362 (709)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~ 362 (709)
...... ........... ........+.++++|+++++|++|.+++.+. .+.+.+..+++
T Consensus 145 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~-~~~~~~~~~~~ 205 (228)
T PF12697_consen 145 EDLIRS------------------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPES-AEELADKLPNA 205 (228)
T ss_dssp HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHH-HHHHHHHSTTE
T ss_pred cccccc------------------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHH-HHHHHHHCCCC
Confidence 000000 11111111111 2233346678889999999999999999886 89999999999
Q ss_pred EEEEEcCCCccccccChhhHHHH
Q 005190 363 EPRNFYGHGHFLLLEDGVDLVTI 385 (709)
Q Consensus 363 ~~~~i~~aGH~~~le~p~~~~~~ 385 (709)
++++++++||++++|+|+++++.
T Consensus 206 ~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 206 ELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEEECCCCCccHHHCHHHHhcC
Confidence 99999999999999999999863
|
... |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=216.26 Aligned_cols=246 Identities=18% Similarity=0.160 Sum_probs=152.0
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHH---HHHh-cCCceEEEEeCCCCCCCCH--------HHHHHH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ---HQRL-GKIFDIWCLHIPVKDRTSF--------TGLVKL 180 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~---~~~L-~~~~~Vi~~Dl~G~G~Ss~--------~~~~~d 180 (709)
+|.....++|...|. +|+|||+||++++...|..+ +..+ ..+|+|+++|+||||.|+. ..++++
T Consensus 15 ~~~~~~~~~y~~~g~----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (282)
T TIGR03343 15 KGLSNFRIHYNEAGN----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90 (282)
T ss_pred ccccceeEEEEecCC----CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHH
Confidence 454445566776664 57899999999888777643 3444 5689999999999999932 134677
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh--hh--hhhhHHHhhchhhhHHhHH
Q 005190 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS--VL--QSTIPLLELIPGQITTMLS 256 (709)
Q Consensus 181 l~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~ 256 (709)
+.++++. .+.++++++||||||.+++.+|.++|++++++|++++....... .. ...................
T Consensus 91 l~~~l~~----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (282)
T TIGR03343 91 VKGLMDA----LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLK 166 (282)
T ss_pred HHHHHHH----cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHH
Confidence 7777776 55679999999999999999999999999999999875321100 00 0000000000000000000
Q ss_pred HhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH---HhhhHhhhhcccCCc
Q 005190 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK---AASAYANSRLHAVKA 333 (709)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~ 333 (709)
..+.....+ .........+........ ............. .........+.++++
T Consensus 167 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 224 (282)
T TIGR03343 167 QMLNVFLFD----------QSLITEELLQGRWENIQR------------QPEHLKNFLISSQKAPLSTWDVTARLGEIKA 224 (282)
T ss_pred HHHhhCccC----------cccCcHHHHHhHHHHhhc------------CHHHHHHHHHhccccccccchHHHHHhhCCC
Confidence 000000000 000000000000000000 0000000000000 001112345788999
Q ss_pred cEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 334 QMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 334 PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|+|+++|++|.+++++. ++.+++.+|++++++++++||++++|+|+.+++.|.+|
T Consensus 225 Pvlli~G~~D~~v~~~~-~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~f 279 (282)
T TIGR03343 225 KTLVTWGRDDRFVPLDH-GLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDF 279 (282)
T ss_pred CEEEEEccCCCcCCchh-HHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHH
Confidence 99999999999999986 89999999999999999999999999999999999943
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=218.09 Aligned_cols=177 Identities=15% Similarity=0.160 Sum_probs=134.0
Q ss_pred cCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHHH----
Q 005190 443 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN---- 518 (709)
Q Consensus 443 ~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~~---- 518 (709)
.||||. +|+|+++||+++ +|.+++...++...-+..+++++..+|++|+ ++++++.+|+|||+|++
T Consensus 123 ~EnIP~-~~~IivsNHqS~-lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~--------fG~~l~~~G~IPVdR~~~~~g 192 (355)
T PTZ00261 123 WDDISR-HGCAYVGNHTSF-WDVYAFIGLTPFRHLLNTRTLMKSSLRKIPI--------FGGVFDRVGHFPVHFKSDSDG 192 (355)
T ss_pred cccCCC-CCEEEEECCCch-HHHHHHHHHcccccccccEEEEHHHHhhccH--------HHHHHHHCCCeeeeccccccc
Confidence 578996 599999999986 7998888876533334578999999998854 78899999999998621
Q ss_pred ---------------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhh
Q 005190 519 ---------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIV 583 (709)
Q Consensus 519 ---------------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~ 583 (709)
+.+.|++|.+|+|||||||+... ..+. +||+|++++|+++|+||||+++.|++++
T Consensus 193 ~~~vdrea~~~v~~~~~e~Lk~G~sLvIFPEGTRS~~g-----g~L~-pFK~GaF~LAieagvPIVPvai~Gs~~~---- 262 (355)
T PTZ00261 193 NFEVDKEKQAQVQQAIDAHLRLGGSLAFFPEGAINKHP-----QVLQ-TFRYGTFATIIKHRMEVYYMVSVGSEKT---- 262 (355)
T ss_pred ccccchHHHHHHHHHHHHHHHCCCEEEEECCcCCcCCC-----CcCC-CCcHHHHHHHHHcCCCEEEEEEeChhhc----
Confidence 23578999999999999994211 2355 9999999999999999999999997776
Q ss_pred cCccccccCccchHHHHHHHhhhhhccccccccccCcccccC-c-cCCCCCceEEEEecC-ccccCCcccccCCHHHHHH
Q 005190 584 LDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-Y-PVPKVPGRFYFYFGK-PIETKGRKRELRDREKAHE 660 (709)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-~-~~p~~~~~~~~~~G~-pI~~~~~~~~~~~~~~~~~ 660 (709)
+| + .+++.++++++.||+ ||++++... ....+.+++
T Consensus 263 ----------------------------------------wP~g~~l~~~pg~I~V~iG~~PI~~~~~~~-~eL~~~lr~ 301 (355)
T PTZ00261 263 ----------------------------------------WPWWMMIGGLPADMHIRIGAYPIDYDRDSS-KDVAVGLQQ 301 (355)
T ss_pred ----------------------------------------CCCCCccCCCCceEEEEECCCCCCCCCCCH-HHHHHHHHH
Confidence 33 1 123347899999999 999875511 111234667
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 005190 661 LYLEIKSEVEKCLAYLKEKR 680 (709)
Q Consensus 661 ~~~~v~~~i~~~~~~l~~~r 680 (709)
+.+++.++|++.++++++.|
T Consensus 302 lmqe~~~~I~~el~~~~~~~ 321 (355)
T PTZ00261 302 RMQKVRDEIAAEVAAAEEAR 321 (355)
T ss_pred HHHHHHHHHHHHHHhhhHHH
Confidence 77777777777777765443
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=215.79 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=156.3
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~ 191 (709)
++|.+.|.+ ++|+|||+||++++...|..+.+.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 18 ~~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~---- 91 (278)
T TIGR03056 18 WHVQDMGPT--AGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA---- 91 (278)
T ss_pred EEEEecCCC--CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH----
Confidence 445555542 467899999999999999999999998999999999999988 568889999998877
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCc--hhhh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD--PLKM 269 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 269 (709)
.+.++++|+||||||.+++.+|.++|++++++|++++.............+....... ............... ....
T Consensus 92 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T TIGR03056 92 EGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLA-CNPFTPPMMSRGAADQQRVER 170 (278)
T ss_pred cCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhh-hcccchHHHHhhcccCcchhH
Confidence 4456899999999999999999999999999999987543211110000000000000 000000000000000 0000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh-hHhhhhcccCCccEEEEeeCCCCCCCc
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS-AYANSRLHAVKAQMLVLCSGKDQLMPS 348 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLvi~G~~D~~v~~ 348 (709)
.......... ......+.+... ................ ......+.++++|+++|+|++|.+++.
T Consensus 171 ~~~~~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 171 LIRDTGSLLD--KAGMTYYGRLIR------------SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred Hhhccccccc--cchhhHHHHhhc------------CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 0000000000 000000000000 0000000111111000 111245678899999999999999999
Q ss_pred HHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 349 QEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 349 ~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+. .+.+.+.+++++++.++++||++++|+|+++++.|.+|
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 276 (278)
T TIGR03056 237 DE-SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQA 276 (278)
T ss_pred HH-HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHH
Confidence 96 89999999999999999999999999999999999954
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=209.07 Aligned_cols=232 Identities=19% Similarity=0.224 Sum_probs=145.1
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
.|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.+. . .++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~-------~-~~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQ-------A-PDPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHh-------C-CCCeEEEEEcHH
Confidence 47899999999999999999999998999999999999998 344444444332 2 368999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEecCCCCcchhh-hh-hh-hHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCch
Q 005190 206 ACIALAVAARNPDIDLVLILVNPATSFNKSV-LQ-ST-IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (709)
Q Consensus 206 G~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (709)
|.+++.+|.++|+.+.++|++++........ +. .. ......+...........+.... ..... .......
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~ 148 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL------ALQTL-GTPTARQ 148 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH------HHHHh-cCCccch
Confidence 9999999999999999999998765432111 10 00 00000000000000000000000 00000 0000000
Q ss_pred HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc
Q 005190 283 TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 362 (709)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~ 362 (709)
....+....... ..-....+......+. .......+.++++|+++++|++|.+++.+. .+.+.+.++++
T Consensus 149 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~ 217 (245)
T TIGR01738 149 DARALKQTLLAR--------PTPNVQVLQAGLEILA--TVDLRQPLQNISVPFLRLYGYLDGLVPAKV-VPYLDKLAPHS 217 (245)
T ss_pred HHHHHHHHhhcc--------CCCCHHHHHHHHHHhh--cccHHHHHhcCCCCEEEEeecCCcccCHHH-HHHHHHhCCCC
Confidence 111111110000 0000011111111111 112235578899999999999999999996 88899999999
Q ss_pred EEEEEcCCCccccccChhhHHHHHhhc
Q 005190 363 EPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 363 ~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++||++++|+|+++++.|.+|
T Consensus 218 ~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 218 ELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred eEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 999999999999999999999999954
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=207.61 Aligned_cols=264 Identities=16% Similarity=0.141 Sum_probs=153.7
Q ss_pred CCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHH
Q 005190 114 GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVR 186 (709)
Q Consensus 114 g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~ 186 (709)
++...|..-....+ .+..++||+||+|++...|....+.|++..+|+++|++|+|+| +.+.-.....+-++
T Consensus 74 ~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 74 NGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCceeEEEeecccc--cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 34445554333322 3577899999999999999999999999999999999999999 22222334555555
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh---h--hhhhhHHHhhchhhhHHhHHHhhhh
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS---V--LQSTIPLLELIPGQITTMLSSTLSL 261 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (709)
+.+...+..+.+|+|||+||.+|..||.+||++|..|||++|+.-.... . ......+...+.......-|..+..
T Consensus 152 ~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR 231 (365)
T KOG4409|consen 152 QWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLR 231 (365)
T ss_pred HHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHH
Confidence 5556688899999999999999999999999999999999996543321 1 0011111111111111111111111
Q ss_pred hcCch----hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH---HhhhHhhhhcccCC--
Q 005190 262 MTGDP----LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK---AASAYANSRLHAVK-- 332 (709)
Q Consensus 262 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~-- 332 (709)
..+.. ............+. ...++... .+.... ....+..-.....++. -+...+.+++..++
T Consensus 232 ~~Gp~Gp~Lv~~~~~d~~~k~~~-----~~~ed~l~--~YiY~~-n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~ 303 (365)
T KOG4409|consen 232 LMGPLGPKLVSRLRPDRFRKFPS-----LIEEDFLH--EYIYHC-NAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKD 303 (365)
T ss_pred hccccchHHHhhhhHHHHHhccc-----cchhHHHH--HHHHHh-cCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccC
Confidence 11110 00000000000000 00111100 000000 0011111111111111 11222334555555
Q ss_pred ccEEEEeeCCCCCCCcHHHHHHHHh--hcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 333 AQMLVLCSGKDQLMPSQEEGERLSS--ALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 333 ~PvLvi~G~~D~~v~~~~~~~~l~~--~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
||+++|+|++|.+..... ..+.+ ....++.++++++||.+++++|+.|++.|.+.
T Consensus 304 ~pv~fiyG~~dWmD~~~g--~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~ 360 (365)
T KOG4409|consen 304 VPVTFIYGDRDWMDKNAG--LEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEE 360 (365)
T ss_pred CCEEEEecCcccccchhH--HHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHH
Confidence 999999999999987774 33333 33369999999999999999999999999843
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=207.74 Aligned_cols=239 Identities=17% Similarity=0.156 Sum_probs=156.2
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCC
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSP 193 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~ 193 (709)
+|...|+ .++.|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++. .+
T Consensus 3 ~~~~~g~-~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~----~~ 77 (251)
T TIGR02427 3 HYRLDGA-ADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH----LG 77 (251)
T ss_pred eEEeecC-CCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC
Confidence 3444554 23578899999999999999999999999999999999999998 678889999998887 34
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
.++++++||||||.+++.+|.++|+.++++|++++........ +........ ...................
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------ 149 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVR--AEGLAALADAVLERWFTPG------ 149 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhh--hccHHHHHHHHHHHHcccc------
Confidence 5689999999999999999999999999999998754322211 100000000 0000000000000000000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
.. ................ .....+......+. .......+.++++|+++++|++|.+++.+. .
T Consensus 150 -~~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~-~ 212 (251)
T TIGR02427 150 -FR--EAHPARLDLYRNMLVR-----------QPPDGYAGCCAAIR--DADFRDRLGAIAVPTLCIAGDQDGSTPPEL-V 212 (251)
T ss_pred -cc--cCChHHHHHHHHHHHh-----------cCHHHHHHHHHHHh--cccHHHHhhhcCCCeEEEEeccCCcCChHH-H
Confidence 00 0000000000000000 01111111111111 112234567889999999999999999996 8
Q ss_pred HHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 353 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 353 ~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.+.+.+++.++++++++||++++++|+++++.|.+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 249 (251)
T TIGR02427 213 REIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDF 249 (251)
T ss_pred HHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHH
Confidence 8899999999999999999999999999999999854
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-23 Score=219.69 Aligned_cols=238 Identities=17% Similarity=0.202 Sum_probs=149.8
Q ss_pred CCCEEEEeCCCCCCccc-HHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc--CCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLG-LIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR--SPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~-~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~--~~~~~v~ 198 (709)
..++|||+||++++... |..+++.|+ ++|+|+++|+||||.| +++++++|+.++++.+... ....+++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred CCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 36789999999988764 678889996 6899999999999988 5688899999998876542 2345799
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
|+||||||++|+.+|.++|+.++++|+++|........... ..............+.. ...... ......
T Consensus 166 LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~--~~~~~~~~~~~~~~p~~--~~~~~~------~~~~~~ 235 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPP--PLVLQILILLANLLPKA--KLVPQK------DLAELA 235 (349)
T ss_pred EEEeccchHHHHHHHHhCcchhhheeEecccccccccccCc--hHHHHHHHHHHHHCCCc--eecCCC------cccccc
Confidence 99999999999999999999999999999865432211000 00000000000000000 000000 000000
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
........... .. .........+.....++.. .......+.++++|+|+|+|++|.+++++. ++.+.+.
T Consensus 236 ~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~-~~~l~~~ 304 (349)
T PLN02385 236 FRDLKKRKMAE-YN--------VIAYKDKPRLRTAVELLRT-TQEIEMQLEEVSLPLLILHGEADKVTDPSV-SKFLYEK 304 (349)
T ss_pred ccCHHHHHHhh-cC--------cceeCCCcchHHHHHHHHH-HHHHHHhcccCCCCEEEEEeCCCCccChHH-HHHHHHH
Confidence 00000000000 00 0000011112222222221 122345678899999999999999999997 8888887
Q ss_pred c--CCcEEEEEcCCCccccccChhh----HHHHHhhc
Q 005190 359 L--HKCEPRNFYGHGHFLLLEDGVD----LVTIIKGA 389 (709)
Q Consensus 359 ~--~~~~~~~i~~aGH~~~le~p~~----~~~~I~~~ 389 (709)
+ +++++++++++||++++|+|++ +.+.|.+|
T Consensus 305 ~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~w 341 (349)
T PLN02385 305 ASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISW 341 (349)
T ss_pred cCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHH
Confidence 6 5789999999999999999987 56666654
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-23 Score=211.96 Aligned_cols=231 Identities=17% Similarity=0.189 Sum_probs=147.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
.+.|+++||+++++..|..+++.|+ .+|+|+++|+||||.| ++.++.+|+.+.++.++...+..+++|+||
T Consensus 25 ~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~ 104 (276)
T PHA02857 25 KALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGH 104 (276)
T ss_pred CEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEc
Confidence 4677777999999999999999995 5899999999999988 446667777777777655555678999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCch
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (709)
||||.+|+.+|.++|+.++++|+++|........ ....+.. .. ............+. ........
T Consensus 105 S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~---~~~~~~~---~~---~~~~~~~~~~~~~~------~~~~~~~~ 169 (276)
T PHA02857 105 SMGATISILAAYKNPNLFTAMILMSPLVNAEAVP---RLNLLAA---KL---MGIFYPNKIVGKLC------PESVSRDM 169 (276)
T ss_pred CchHHHHHHHHHhCccccceEEEecccccccccc---HHHHHHH---HH---HHHhCCCCccCCCC------HhhccCCH
Confidence 9999999999999999999999999854421100 0000000 00 00000000000000 00000000
Q ss_pred -HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc-C
Q 005190 283 -TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-H 360 (709)
Q Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~-~ 360 (709)
.......+.. .........+...... ........+.++++|+|+++|++|.++|++. ++.+.+.+ +
T Consensus 170 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~-~~~l~~~~~~ 237 (276)
T PHA02857 170 DEVYKYQYDPL----------VNHEKIKAGFASQVLK-ATNKVRKIIPKIKTPILILQGTNNEISDVSG-AYYFMQHANC 237 (276)
T ss_pred HHHHHHhcCCC----------ccCCCccHHHHHHHHH-HHHHHHHhcccCCCCEEEEecCCCCcCChHH-HHHHHHHccC
Confidence 0000000000 0000011111111111 1122345678899999999999999999997 88888866 4
Q ss_pred CcEEEEEcCCCccccccChh---hHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLLEDGV---DLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~---~~~~~I~~~ 389 (709)
++++++++++||.++.|+++ ++.+.+.+|
T Consensus 238 ~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~ 269 (276)
T PHA02857 238 NREIKIYEGAKHHLHKETDEVKKSVMKEIETW 269 (276)
T ss_pred CceEEEeCCCcccccCCchhHHHHHHHHHHHH
Confidence 78999999999999999874 466666655
|
|
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-24 Score=211.94 Aligned_cols=185 Identities=22% Similarity=0.225 Sum_probs=126.6
Q ss_pred CCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 436 ~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
.+++++|.||||.+||+|+|+||++..+|.+++...+.. .+..++++++..+|+.|+ ++.+ .++++
T Consensus 8 ~~v~v~G~e~lp~~g~~iiv~NH~s~~~D~~~l~~~~~~-~~~~~~~lak~~l~~~p~--------l~~~-----~i~v~ 73 (210)
T cd07986 8 LEVDVSGLENIPKDGPVVIVANHPFGILDGLILADLLGS-VRPDVRILANQLLSKIPE--------LRDL-----FIPVD 73 (210)
T ss_pred EEEecCchhcCCCCCCEEEEEcCCccchHHHHHHHHHHH-hCCCeEEEeHHhhhhCcc--------hHhh-----EEecc
Confidence 367899999999999999999998533698777655443 345789999999997753 3322 46665
Q ss_pred HH--------------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhh
Q 005190 516 GI--------------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQ 581 (709)
Q Consensus 516 ~~--------------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~ 581 (709)
+. ++.++|++|.+|+|||||||+.......+..+. +||+|+++||.++|+|||||++.|.++.+.
T Consensus 74 r~~~~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~-~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~ 152 (210)
T cd07986 74 PLEGRAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDR-PWNPFVARLARKAKAPVVPVYFSGRNSRLF 152 (210)
T ss_pred CCCCcchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccC-CccHHHHHHHHHHCCCEEEEEEeeeCcHHH
Confidence 42 567889999999999999997654321122334 889999999999999999999999877643
Q ss_pred hhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccC-ccCCCCCceEEEEecCccccCCcccccCCHHHHHH
Q 005190 582 IVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-YPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 660 (709)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~ 660 (709)
+.... ... .++ ...+| +.+...++++.+.||+||++.++. ..++.++
T Consensus 153 ~~~~~-----------~~~-------~~~----------~~~~~~~~~~~~~~~v~v~~g~pI~~~~~~----~~~~~~~ 200 (210)
T cd07986 153 YLAGL-----------IHP-------TLR----------TLLLPRELLNKRGKTIRIRVGRPIPPEELA----RFEDAEE 200 (210)
T ss_pred HHHHc-----------cCH-------HHH----------HHHHHHHHHHhCCCEEEEEeCCcCCHHHHh----cCCCHHH
Confidence 32100 000 000 00011 112234789999999999988652 1234556
Q ss_pred HHHHHHH
Q 005190 661 LYLEIKS 667 (709)
Q Consensus 661 ~~~~v~~ 667 (709)
+.+.+++
T Consensus 201 l~~~~~~ 207 (210)
T cd07986 201 LADFLRL 207 (210)
T ss_pred HHHHHHH
Confidence 6665554
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.1e-23 Score=207.01 Aligned_cols=225 Identities=19% Similarity=0.183 Sum_probs=139.9
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
+|+|||+||++++...|..+++.|+ +|+|+++|+||||.| +++++++|+.++++. .+.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~----~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS----YNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH----cCCCCeEEEEECHH
Confidence 5689999999999999999999995 799999999999998 778999999999987 55689999999999
Q ss_pred HHHHHHHHHhCCCc-eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHH----hHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 206 ACIALAVAARNPDI-DLVLILVNPATSFNKSVLQSTIPLLELIPGQITT----MLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 206 G~iAl~~A~~~P~~-v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
|.+|+.+|.++|+. ++++|++++........... .... ........ .....+..+.... .......
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 147 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQ-ARWQ-NDRQWAQRFRQEPLEQVLADWYQQP-------VFASLNA 147 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHH-HHHh-hhHHHHHHhccCcHHHHHHHHHhcc-------hhhccCc
Confidence 99999999999765 99999988754432211100 0000 00000000 0000000000000 0000000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH-HhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
. ........... .............. .......+.+.++++|+++|+|++|..+. .+.+.
T Consensus 148 ~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~~- 208 (242)
T PRK11126 148 E-QRQQLVAKRSN-----------NNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQQ- 208 (242)
T ss_pred c-HHHHHHHhccc-----------CCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHHH-
Confidence 0 00000000000 00000000000000 01112335678899999999999998552 22222
Q ss_pred CCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 360 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 360 ~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++++++++++||++++|+|+++++.|.+|
T Consensus 209 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 238 (242)
T PRK11126 209 LALPLHVIPNAGHNAHRENPAAFAASLAQI 238 (242)
T ss_pred hcCeEEEeCCCCCchhhhChHHHHHHHHHH
Confidence 379999999999999999999999999954
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-23 Score=217.80 Aligned_cols=244 Identities=18% Similarity=0.149 Sum_probs=152.2
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHHhh
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~~~ 189 (709)
+|.+.|+. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.+++++
T Consensus 118 ~y~~~G~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-- 193 (383)
T PLN03084 118 FCVESGSN--NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-- 193 (383)
T ss_pred EEEecCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH--
Confidence 46666652 467899999999999999999999998999999999999987 457888999999988
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
...++++|+|||+||.+++.+|..+|++|+++|++++............ +..+... ....++. ......
T Consensus 194 --l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~---l~~~~~~---l~~~~~~---~~~~~~ 262 (383)
T PLN03084 194 --LKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPST---LSEFSNF---LLGEIFS---QDPLRA 262 (383)
T ss_pred --hCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHH---HHHHHHH---Hhhhhhh---cchHHH
Confidence 4457899999999999999999999999999999998643211111000 0000000 0000000 000000
Q ss_pred HHHHHhh--ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh----hhHhhhh--cccCCccEEEEeeC
Q 005190 270 AMDNVAK--RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA----SAYANSR--LHAVKAQMLVLCSG 341 (709)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--l~~i~~PvLvi~G~ 341 (709)
....+.. .....+.....+...... .......+......+... ....... ..++++|+|+|+|+
T Consensus 263 ~~~~~~~~~~~~~~~e~~~~~~~~~~~--------~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~ 334 (383)
T PLN03084 263 SDKALTSCGPYAMKEDDAMVYRRPYLT--------SGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGL 334 (383)
T ss_pred HhhhhcccCccCCCHHHHHHHhccccC--------CcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeC
Confidence 0000000 000000000001000000 000000000000111000 0001111 14679999999999
Q ss_pred CCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 342 KDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 342 ~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|.+++.+. .+.+++. .+++++++++|||++++|+|++++++|.+|
T Consensus 335 ~D~~v~~~~-~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~F 380 (383)
T PLN03084 335 RDRWLNYDG-VEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGI 380 (383)
T ss_pred CCCCcCHHH-HHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHH
Confidence 999999986 8888876 489999999999999999999999999943
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=206.07 Aligned_cols=255 Identities=16% Similarity=0.142 Sum_probs=163.5
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHH
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRS 187 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~ 187 (709)
.+++|.+.|. .++|.|+++||++.+..+|+.+...|+ .+|+|+++|+||+|.| ++..++.|+..++++
T Consensus 32 I~~h~~e~g~--~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGP--GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecC--CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH
Confidence 5777777765 378999999999999999999999996 5699999999999999 779999999999999
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhh-----------hHHhH-
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ-----------ITTML- 255 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~- 255 (709)
++.++++++||+||+++|+.+|..+|++|+++|+++............ ......... ....+
T Consensus 110 ----Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~--~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 110 ----LGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLD--SSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred ----hccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhh--hhccccCccceeEeccccCcchhhhc
Confidence 568899999999999999999999999999999998866621111100 000000000 00000
Q ss_pred ----HHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh---hHhhhhc
Q 005190 256 ----SSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS---AYANSRL 328 (709)
Q Consensus 256 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 328 (709)
+.+...+....... ....+........-....+.. .+...+..+.+...++..+... ..+...+
T Consensus 184 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~w~t~edi~-------~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPG--PLIVPKQPNENPLWLTEEDIA-------FYVSKFQIDGFTGPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred cchhHHhHHhhhccccCC--ccccCCCCCCccchhhHHHHH-------HHHhccccccccccchhhHHHhhCchhccccc
Confidence 00000000000000 000000000000000001110 1111112222222222222211 1224567
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc-EEEEEcCCCccccccChhhHHHHHhhc
Q 005190 329 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC-EPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 329 ~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~-~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++++|+++|+|++|.+.+.....+.+.+..++. +.++++++||++++|+|+++++.|.++
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f 316 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGF 316 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHH
Confidence 8899999999999999998774366777778865 788999999999999999999999944
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=216.70 Aligned_cols=253 Identities=14% Similarity=0.121 Sum_probs=146.6
Q ss_pred ccccccCCCCCC-----CCCEEEEeCCCCCCcccHH--HHHHHh--------cCCceEEEEeCCCCCCCC----------
Q 005190 119 WFSPLECGSHTR-----DSPLLLFLPGIDGVGLGLI--RQHQRL--------GKIFDIWCLHIPVKDRTS---------- 173 (709)
Q Consensus 119 ~~~~~~~g~p~~-----~~p~Vv~lHG~~~s~~~~~--~~~~~L--------~~~~~Vi~~Dl~G~G~Ss---------- 173 (709)
-++|.+.|++.. .+|+|||+||++++...|. .+.+.| +++|+|+++|+||||.|+
T Consensus 51 ~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~ 130 (360)
T PRK06489 51 RLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAF 130 (360)
T ss_pred eEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCC
Confidence 456666665210 1678999999999988875 455544 678999999999999882
Q ss_pred ----HHHHHHHHHHHH-HHhhccCCCCCEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcch-hhhhhh---hHH
Q 005190 174 ----FTGLVKLVESTV-RSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNK-SVLQST---IPL 243 (709)
Q Consensus 174 ----~~~~~~dl~~~l-~~~~~~~~~~~v~-LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~-~~~~~~---~~~ 243 (709)
++++++++.+++ ++ .+.++++ |+||||||++|+.+|.++|++|+++|++++...... ...... ...
T Consensus 131 ~~~~~~~~a~~~~~~l~~~----lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~ 206 (360)
T PRK06489 131 PRYDYDDMVEAQYRLVTEG----LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIES 206 (360)
T ss_pred CcccHHHHHHHHHHHHHHh----cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHH
Confidence 345666655543 43 4556775 899999999999999999999999999987532111 110000 000
Q ss_pred Hhhchhh---h----HHhHHHhhhh--hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHH
Q 005190 244 LELIPGQ---I----TTMLSSTLSL--MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKI 314 (709)
Q Consensus 244 ~~~~~~~---~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (709)
....... . .......... ........ ..................... .. .......+....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~ 276 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTL---AYQAQAPTRAAADKLVDERLA------AP-VTADANDFLYQW 276 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHhcCChHHHHHHHHHHHH------hh-hhcCHHHHHHHH
Confidence 0000000 0 0000000000 00000000 000000000000001100000 00 000111111111
Q ss_pred HHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH--HHHHhhcCCcEEEEEcCC----CccccccChhhHHHHHhh
Q 005190 315 ELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG--ERLSSALHKCEPRNFYGH----GHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 315 ~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~--~~l~~~~~~~~~~~i~~a----GH~~~le~p~~~~~~I~~ 388 (709)
... ...+..+.+.+|++|+|+|+|++|.++|++. + +.+++.+|++++++++++ ||+++ |+|+++++.|.+
T Consensus 277 ~~~--~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~-~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~ 352 (360)
T PRK06489 277 DSS--RDYNPSPDLEKIKAPVLAINSADDERNPPET-GVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAE 352 (360)
T ss_pred HHh--hccChHHHHHhCCCCEEEEecCCCcccChhh-HHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHH
Confidence 111 1122346788999999999999999999885 4 788999999999999996 99997 899999999994
Q ss_pred c
Q 005190 389 A 389 (709)
Q Consensus 389 ~ 389 (709)
+
T Consensus 353 F 353 (360)
T PRK06489 353 F 353 (360)
T ss_pred H
Confidence 3
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=218.28 Aligned_cols=249 Identities=21% Similarity=0.302 Sum_probs=149.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCC--ceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKI--FDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~--~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
..++||++||++++...|..+...|.+. +.|+++|++|||.+ +..++++.+..++.. ....++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~----~~~~~~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE----VFVEPVSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh----hcCcceEE
Confidence 5778999999999999999999999765 99999999999954 446666666666655 55678999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEE---EecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcC-chhhhHHHHHh
Q 005190 200 VGESLGACIALAVAARNPDIDLVLI---LVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTG-DPLKMAMDNVA 275 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lV---l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 275 (709)
+|||+||.+|+.+|+.+|+.|+++| ++++...........................+........ ...........
T Consensus 133 vghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 133 VGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKV 212 (326)
T ss_pred EEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceee
Confidence 9999999999999999999999999 5555333222221111111111111100000000000000 00000000000
Q ss_pred hccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh---hhHhhhhcccCC-ccEEEEeeCCCCCCCcHHH
Q 005190 276 KRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA---SAYANSRLHAVK-AQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~-~PvLvi~G~~D~~v~~~~~ 351 (709)
.........+.... ... . ........+. +..++... .......+.++. ||+|+++|++|+++|.+.
T Consensus 213 ~~~~~~~~~~~~~~-~~~---~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~- 282 (326)
T KOG1454|consen 213 VYTDPSRLLEKLLH-LLS---R--PVKEHFHRDA---RLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLEL- 282 (326)
T ss_pred eccccccchhhhhh-hee---c--ccccchhhhh---eeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHH-
Confidence 00000000000000 000 0 0000000000 00011001 122234556666 999999999999999996
Q ss_pred HHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 352 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 352 ~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
+..+.+.+|++++++++++||.+++|+|+++++.|. .|+++.
T Consensus 283 ~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~--~Fi~~~ 324 (326)
T KOG1454|consen 283 AEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLR--SFIARL 324 (326)
T ss_pred HHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHH--HHHHHh
Confidence 999999889999999999999999999999999999 565543
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-22 Score=210.81 Aligned_cols=254 Identities=14% Similarity=0.136 Sum_probs=153.9
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------------CHHHHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------------SFTGLVKLVESTV 185 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------------s~~~~~~dl~~~l 185 (709)
++|...+.+ +++++||++||++++...|..++..+ .++|+|+++|+||||.| +++++++|+..++
T Consensus 43 l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~ 121 (330)
T PRK10749 43 IRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFW 121 (330)
T ss_pred EEEEEccCC-CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHH
Confidence 444444431 24568999999999988999999877 58999999999999988 3678899999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh-hHHHhhchhhhHHhHHHhhhh--h
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST-IPLLELIPGQITTMLSSTLSL--M 262 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~ 262 (709)
+.+....+..+++++||||||.+++.+|.++|+.++++|+++|............ ....... .. .+..... .
T Consensus 122 ~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~ 196 (330)
T PRK10749 122 QQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWA----EG-HPRIRDGYAI 196 (330)
T ss_pred HHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHH----HH-hcCCCCcCCC
Confidence 8865555678999999999999999999999999999999998654321111000 0000000 00 0000000 0
Q ss_pred cCchhhhHHHHHhhccCC-chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeC
Q 005190 263 TGDPLKMAMDNVAKRLSL-QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG 341 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~ 341 (709)
....+... ......... .............. +.. ......+.+....+.. .......+.++++|+|+|+|+
T Consensus 197 ~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~Lii~G~ 268 (330)
T PRK10749 197 GTGRWRPL-PFAINVLTHSRERYRRNLRFYADD----PEL--RVGGPTYHWVRESILA-GEQVLAGAGDITTPLLLLQAE 268 (330)
T ss_pred CCCCCCCC-CcCCCCCCCCHHHHHHHHHHHHhC----CCc--ccCCCcHHHHHHHHHH-HHHHHhhccCCCCCEEEEEeC
Confidence 00000000 000000000 01111111111000 000 0001122222222221 112235568899999999999
Q ss_pred CCCCCCcHHHHHHHHhhc-------CCcEEEEEcCCCccccccCh---hhHHHHHhh
Q 005190 342 KDQLMPSQEEGERLSSAL-------HKCEPRNFYGHGHFLLLEDG---VDLVTIIKG 388 (709)
Q Consensus 342 ~D~~v~~~~~~~~l~~~~-------~~~~~~~i~~aGH~~~le~p---~~~~~~I~~ 388 (709)
+|.+++++. ++.+.+.+ +++++++++++||.++.|.+ +.+.+.|.+
T Consensus 269 ~D~vv~~~~-~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~ 324 (330)
T PRK10749 269 EERVVDNRM-HDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVD 324 (330)
T ss_pred CCeeeCHHH-HHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHH
Confidence 999999996 88787755 35689999999999999987 345555553
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-22 Score=210.53 Aligned_cols=233 Identities=20% Similarity=0.232 Sum_probs=143.4
Q ss_pred CCCEEEEeCCCCCCc-ccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc--CCCCCEE
Q 005190 131 DSPLLLFLPGIDGVG-LGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR--SPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~--~~~~~v~ 198 (709)
..++|||+||++.+. ..|..+...|+ +||+|+++|+||||.| +++++++|+.++++.+... ....+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 356799999998664 35666777885 6899999999999998 4678899999999987653 2345799
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
|+||||||.+|+.++.++|+.|+++|+++|............ .. ..... ....+.......... .......
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~-~~~~~----~~~~~~~~~~~~~~~---~~~~~~~ 208 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW-PI-PQILT----FVARFLPTLAIVPTA---DLLEKSV 208 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch-HH-HHHHH----HHHHHCCCCccccCC---Ccccccc
Confidence 999999999999999999999999999998654322110000 00 00000 000000000000000 0000000
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
.. .....+. ..... .........+...+... .......+.++++|+|+|+|++|.+++++. ++.+.+.
T Consensus 209 ~~-~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~ivp~~~-~~~l~~~ 276 (330)
T PLN02298 209 KV-PAKKIIA----KRNPM-----RYNGKPRLGTVVELLRV-TDYLGKKLKDVSIPFIVLHGSADVVTDPDV-SRALYEE 276 (330)
T ss_pred cC-HHHHHHH----HhCcc-----ccCCCccHHHHHHHHHH-HHHHHHhhhhcCCCEEEEecCCCCCCCHHH-HHHHHHH
Confidence 00 0000000 00000 00001111122222211 122345678899999999999999999997 8888776
Q ss_pred cC--CcEEEEEcCCCccccccChhhHHH
Q 005190 359 LH--KCEPRNFYGHGHFLLLEDGVDLVT 384 (709)
Q Consensus 359 ~~--~~~~~~i~~aGH~~~le~p~~~~~ 384 (709)
++ ++++++++++||.+++++|+...+
T Consensus 277 i~~~~~~l~~~~~a~H~~~~e~pd~~~~ 304 (330)
T PLN02298 277 AKSEDKTIKIYDGMMHSLLFGEPDENIE 304 (330)
T ss_pred hccCCceEEEcCCcEeeeecCCCHHHHH
Confidence 54 789999999999999999875433
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-23 Score=195.84 Aligned_cols=267 Identities=19% Similarity=0.244 Sum_probs=181.7
Q ss_pred CcHhhHHHHHHHhhcccCCCCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc--CCceEEEEeCCCCCCC
Q 005190 95 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG--KIFDIWCLHIPVKDRT 172 (709)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~S 172 (709)
..|++||++.+++--+ +....+-.|+. +.+.+.+|.++++||.+.|...|+.++..|. -..+|+++|+||||.|
T Consensus 41 ~pWs~yFdekedv~i~---~~~~t~n~Y~t-~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeT 116 (343)
T KOG2564|consen 41 VPWSDYFDEKEDVSID---GSDLTFNVYLT-LPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGET 116 (343)
T ss_pred CchHHhhccccccccC---CCcceEEEEEe-cCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcc
Confidence 4589999998776432 32222333433 3335679999999999999999999999995 4578889999999999
Q ss_pred --------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCCcchhhhhhhhH
Q 005190 173 --------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIP 242 (709)
Q Consensus 173 --------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~~~~~~~~~~~~ 242 (709)
+.+++++|+.++++.+-... ..+++||||||||.||...|... |. +.|+++++.+.+.....+..+..
T Consensus 117 k~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~ 194 (343)
T KOG2564|consen 117 KVENEDDLSLETMSKDFGAVIKELFGEL-PPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQH 194 (343)
T ss_pred ccCChhhcCHHHHHHHHHHHHHHHhccC-CCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHH
Confidence 77999999999999876555 46899999999999998888754 66 88999999988877777778888
Q ss_pred HHhhchhhhH---HhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH
Q 005190 243 LLELIPGQIT---TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA 319 (709)
Q Consensus 243 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (709)
+++..|+.+. +++.+-++........ + ...+....+.... ....+.|+.++...
T Consensus 195 fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~--S----ArVsmP~~~~~~~-----------------eGh~yvwrtdL~kt 251 (343)
T KOG2564|consen 195 FLRNRPKSFKSIEDAIEWHVRSGQLRNRD--S----ARVSMPSQLKQCE-----------------EGHCYVWRTDLEKT 251 (343)
T ss_pred HHhcCCccccchhhHHHHHhccccccccc--c----ceEecchheeecc-----------------CCCcEEEEeecccc
Confidence 8888877543 2222222211111000 0 0000000000000 00111122111111
Q ss_pred h------hhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccc
Q 005190 320 A------SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 320 ~------~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
. .....+.+-...+|-++|.++.|.....-. ..++. .+.++.+++.+||+++.+.|.+++..+. .|+.
T Consensus 252 e~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLt-iGQMQ---Gk~Q~~vL~~~GH~v~ED~P~kva~~~~--~f~~ 325 (343)
T KOG2564|consen 252 EQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLT-IGQMQ---GKFQLQVLPLCGHFVHEDSPHKVAECLC--VFWI 325 (343)
T ss_pred chhHHHHHhhhhhHhhCCCccceeEEecccccCccee-eeeec---cceeeeeecccCceeccCCcchHHHHHH--HHHh
Confidence 1 111224556778999999999998765442 33333 3789999999999999999999999999 7888
Q ss_pred ccC
Q 005190 394 RGR 396 (709)
Q Consensus 394 r~~ 396 (709)
|++
T Consensus 326 Rn~ 328 (343)
T KOG2564|consen 326 RNR 328 (343)
T ss_pred hhc
Confidence 886
|
|
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=197.96 Aligned_cols=165 Identities=25% Similarity=0.363 Sum_probs=129.8
Q ss_pred CCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 436 ~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
.+++|.|.||+|.++|+|+|+||+...+|..++... .++.++++++..+|..|+ ++.+++.+|++|++
T Consensus 14 ~~v~v~G~e~lp~~~~~I~v~NH~~s~~D~~~l~~~----~~~~~~~v~~~~~~~~p~--------~~~~~~~~g~ipI~ 81 (203)
T cd07992 14 RRITVVGRENVPKDGPVIFLGNHPNALIDPLLLAAT----LRRPVRFLAKADLFKNPL--------IGWLLESFGAIPVY 81 (203)
T ss_pred eeeEEECCccCCCCCCEEEEeCCccchhhHHHHHHh----cCCCcEEEEEhhhccchH--------HHHHHHHcCceEeE
Confidence 357899999999999999999999322688776665 456799999999998743 88899999999998
Q ss_pred HH------------------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHH------cCCcEEEe
Q 005190 516 GI------------------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATT------FGAKIVPF 571 (709)
Q Consensus 516 ~~------------------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~------~~~pIvPv 571 (709)
|. .+.+.|++|..|+|||||+|+ ..+.+ +++|+|+++||.+ +++|||||
T Consensus 82 r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~------~~~~~-~~fk~G~~~lA~~a~~~~~~~vpIvPv 154 (203)
T cd07992 82 RPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSH------DRPRL-LPLKAGAARMALEALEAGQKDVKIVPV 154 (203)
T ss_pred cCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCC------CCCCc-cCcCccHHHHHHHHHhcCCCCCeEEee
Confidence 63 356788999999999999983 22344 4999999999986 69999999
Q ss_pred eeecchhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccc
Q 005190 572 GAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRE 651 (709)
Q Consensus 572 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~ 651 (709)
++.+.... ..++++.+.||+||++.+....
T Consensus 155 ~i~~~~~~--------------------------------------------------~~~~~i~i~~g~pi~~~~~~~~ 184 (203)
T cd07992 155 GLNYEDKS--------------------------------------------------RFRSRVLVEFGKPISVSAFEEA 184 (203)
T ss_pred eEEeCCCC--------------------------------------------------CCCCeEEEEECCCccccccccc
Confidence 99653211 1257899999999999877544
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 005190 652 LRDREKAHELYLEIKSEV 669 (709)
Q Consensus 652 ~~~~~~~~~~~~~v~~~i 669 (709)
+.+++..+.+++++.+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~ 202 (203)
T cd07992 185 EASRDVEKKLINQLEAEL 202 (203)
T ss_pred ccchhHHHHHHHHHHHhh
Confidence 456666777777766665
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=197.67 Aligned_cols=234 Identities=21% Similarity=0.234 Sum_probs=143.4
Q ss_pred CEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHH-HHHHHHHhhccCCCCCEEEEEe
Q 005190 133 PLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKL-VESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~d-l~~~l~~~~~~~~~~~v~LvGh 202 (709)
|+|||+||++++...|..+.+.|+++|+|+++|+||||.| ++++++++ +..+++. .+.++++++||
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~G~ 77 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ----LGIEPFFLVGY 77 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH----cCCCeEEEEEe
Confidence 6799999999999999999999999999999999999988 34555555 4444443 55678999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh--chhhhHH-hHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL--IPGQITT-MLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
|+||.+|+.+|.++|+.+.+++++++............ ..... ....+.. ................. .....
T Consensus 78 S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 152 (251)
T TIGR03695 78 SMGGRIALYYALQYPERVQGLILESGSPGLATEEERAA-RRQNDEQLAQRFEQEGLEAFLDDWYQQPLFAS----QKNLP 152 (251)
T ss_pred ccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhh-hhhcchhhhhHHHhcCccHHHHHHhcCceeee----cccCC
Confidence 99999999999999999999999988654332111000 00000 0000000 00000000000000000 00000
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHH-HHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKI-ELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
. .......... ... ....+.... .............+.++++|+++++|++|..++ +. .+.+.+.
T Consensus 153 ~-~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~-~~~~~~~ 218 (251)
T TIGR03695 153 P-EQRQALRAKR----------LAN-NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QI-AKEMQKL 218 (251)
T ss_pred h-HHhHHHHHhc----------ccc-cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HH-HHHHHhc
Confidence 0 0000000000 000 001111111 110011112234567899999999999998774 43 6778888
Q ss_pred cCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 359 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 359 ~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+++++++++++||++++|+|+++++.|.+|
T Consensus 219 ~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~ 249 (251)
T TIGR03695 219 LPNLTLVIIANAGHNIHLENPEAFAKILLAF 249 (251)
T ss_pred CCCCcEEEEcCCCCCcCccChHHHHHHHHHH
Confidence 8999999999999999999999999999854
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.9e-22 Score=209.73 Aligned_cols=258 Identities=15% Similarity=0.127 Sum_probs=153.3
Q ss_pred ccccccCCCCC-CCCCEEEEeCCCCCCcc-----------cHHHHH---HHh-cCCceEEEEeCCC--CCCC--------
Q 005190 119 WFSPLECGSHT-RDSPLLLFLPGIDGVGL-----------GLIRQH---QRL-GKIFDIWCLHIPV--KDRT-------- 172 (709)
Q Consensus 119 ~~~~~~~g~p~-~~~p~Vv~lHG~~~s~~-----------~~~~~~---~~L-~~~~~Vi~~Dl~G--~G~S-------- 172 (709)
.++|...|.++ .++++|||+||++++.. .|..++ ..| .++|+|+++|+|| ||.|
T Consensus 17 ~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~ 96 (351)
T TIGR01392 17 RVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPG 96 (351)
T ss_pred eEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCC
Confidence 46677777532 24578999999999763 366665 244 6889999999999 5544
Q ss_pred -----------CHHHHHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh
Q 005190 173 -----------SFTGLVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240 (709)
Q Consensus 173 -----------s~~~~~~dl~~~l~~~~~~~~~~~-v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~ 240 (709)
+++++++++.+++++ ++.++ ++|+||||||++++.+|.++|++++++|++++............
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
T TIGR01392 97 GRPYGSDFPLITIRDDVKAQKLLLDH----LGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFN 172 (351)
T ss_pred CCcCCCCCCCCcHHHHHHHHHHHHHH----cCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHH
Confidence 247888888888877 45667 99999999999999999999999999999998654432111100
Q ss_pred h---HHHhhchh-------------hhHHhHHHhhhhhcCchhhhHHHHHhhccCCc----------hHHHHHHHhHHHh
Q 005190 241 I---PLLELIPG-------------QITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ----------PTIQDLSQDLVAL 294 (709)
Q Consensus 241 ~---~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 294 (709)
. ........ ................... ....+....... ...+.......
T Consensus 173 ~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (351)
T TIGR01392 173 EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEES-MAERFGRAPQSGESPASGFDTRFQVESYLRYQG-- 249 (351)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHH-HHHHhCcCcccccccccccCccchHHHHHHHHH--
Confidence 0 00000000 0000000000000000000 000000000000 00000000000
Q ss_pred hcchhhhhhcCChhhHHHHHHHHHHhh-----hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEE----
Q 005190 295 SSYLPVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR---- 365 (709)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~---- 365 (709)
..+........+......+...+ .+..+.+.+|++|+|+|+|++|.++|++. ++.+++.+++++++
T Consensus 250 ----~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~-~~~~a~~i~~~~~~v~~~ 324 (351)
T TIGR01392 250 ----DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAE-SRELAKALPAAGLRVTYV 324 (351)
T ss_pred ----HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHH-HHHHHHHHhhcCCceEEE
Confidence 00111111222222222222111 12346788999999999999999999997 99999999988766
Q ss_pred -EEcCCCccccccChhhHHHHHhh
Q 005190 366 -NFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 366 -~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
+++++||++++|+|+++++.|.+
T Consensus 325 ~i~~~~GH~~~le~p~~~~~~l~~ 348 (351)
T TIGR01392 325 EIESPYGHDAFLVETDQVEELIRG 348 (351)
T ss_pred EeCCCCCcchhhcCHHHHHHHHHH
Confidence 56799999999999999999994
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=207.85 Aligned_cols=254 Identities=15% Similarity=0.122 Sum_probs=148.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcc------------cHHHHHH---Hh-cCCceEEEEeCCCCCCC-----CHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL------------GLIRQHQ---RL-GKIFDIWCLHIPVKDRT-----SFTGL 177 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~------------~~~~~~~---~L-~~~~~Vi~~Dl~G~G~S-----s~~~~ 177 (709)
-++|.+.|.. +.| +||+||+.++.. .|..++. .| +++|+|+++|+||||.| +.+++
T Consensus 47 ~l~y~~~G~~--~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~ 123 (343)
T PRK08775 47 RLRYELIGPA--GAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQ 123 (343)
T ss_pred eEEEEEeccC--CCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHH
Confidence 4667777741 234 666666655554 6888886 57 57899999999999987 56889
Q ss_pred HHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh--hhhhhHHHhhch------
Q 005190 178 VKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--LQSTIPLLELIP------ 248 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~~~~~-v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~--~~~~~~~~~~~~------ 248 (709)
++|+.+++++ ++.++ ++|+||||||++|+.+|.++|++|+++|++++........ +...........
T Consensus 124 a~dl~~ll~~----l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (343)
T PRK08775 124 ADAIALLLDA----LGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAE 199 (343)
T ss_pred HHHHHHHHHH----cCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999999988 44445 5799999999999999999999999999999864432111 000000000000
Q ss_pred hhhHHhHHHhhhhhcCchhhhHHHHHhhccC-----CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhH
Q 005190 249 GQITTMLSSTLSLMTGDPLKMAMDNVAKRLS-----LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAY 323 (709)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (709)
................... .....+..... ............. ...........+.. +..... .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~---~~~~~~-~ 268 (343)
T PRK08775 200 KHGLALARQLAMLSYRTPE-EFEERFDAPPEVINGRVRVAAEDYLDAAG------AQYVARTPVNAYLR---LSESID-L 268 (343)
T ss_pred hhHHHHHHHHHHHHcCCHH-HHHHHhCCCccccCCCccchHHHHHHHHH------HHHHHhcChhHHHH---HHHHHh-h
Confidence 0000000000000000000 00000000000 0000000000000 00000011111111 111100 0
Q ss_pred hhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc-CCcEEEEEcC-CCccccccChhhHHHHHhhccccc
Q 005190 324 ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYG-HGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 324 ~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~-~~~~~~~i~~-aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
....+.++++|+|+|+|++|.+++++. .+.+.+.+ ++++++++++ +||++++|+|++|++.|. .|+.
T Consensus 269 ~~~~l~~I~~PtLvi~G~~D~~~p~~~-~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~--~FL~ 337 (343)
T PRK08775 269 HRVDPEAIRVPTVVVAVEGDRLVPLAD-LVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILT--TALR 337 (343)
T ss_pred cCCChhcCCCCeEEEEeCCCEeeCHHH-HHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHH--HHHH
Confidence 012467899999999999999999886 88888877 6999999985 999999999999999999 4554
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-22 Score=209.31 Aligned_cols=262 Identities=14% Similarity=0.082 Sum_probs=150.3
Q ss_pred ccccccCCCCC-CCCCEEEEeCCCCCCcccHHHHH---HHhc-CCceEEEEeCCCCCCCCH----------HH-----HH
Q 005190 119 WFSPLECGSHT-RDSPLLLFLPGIDGVGLGLIRQH---QRLG-KIFDIWCLHIPVKDRTSF----------TG-----LV 178 (709)
Q Consensus 119 ~~~~~~~g~p~-~~~p~Vv~lHG~~~s~~~~~~~~---~~L~-~~~~Vi~~Dl~G~G~Ss~----------~~-----~~ 178 (709)
-++|.+.|++. ++.|+||++||++++...|..++ +.|. ++|+|+++|+||||.|+. ++ ++
T Consensus 27 ~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~ 106 (339)
T PRK07581 27 RLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIY 106 (339)
T ss_pred eEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHH
Confidence 45577777532 24467888888887777776544 4674 689999999999999931 11 56
Q ss_pred HHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhc---hhh---h
Q 005190 179 KLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI---PGQ---I 251 (709)
Q Consensus 179 ~dl~~~l~~~~~~~~~~~-v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~---~~~---~ 251 (709)
+|+.+....+.+.++.++ ++||||||||++|+.+|.++|++|+++|++++..................+ +.. .
T Consensus 107 ~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 186 (339)
T PRK07581 107 DNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGW 186 (339)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 777663333333366778 579999999999999999999999999999875543221110000000000 000 0
Q ss_pred H-----HhHHHhhhhhcCchhhhHHHHHhhc-cC-Cc-hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh---
Q 005190 252 T-----TMLSSTLSLMTGDPLKMAMDNVAKR-LS-LQ-PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA--- 320 (709)
Q Consensus 252 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 320 (709)
. ..+.......... .......... .. .. .......... ............+...+..+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 187 YAEPPERGLRAHARVYAGW--GFSQAFYRQELWRAMGYASLEDFLVGF------WEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCcHHHHHHHHHHHHHHH--HhHHHHHHhhhccccChhhHHHHHHHH------HHHhhcccCcccHHHHHHHhhhcccc
Confidence 0 0000000000000 0000000000 00 00 0000000000 00000001112222211111110
Q ss_pred -----hhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcC-CCccccccChhhHHHHHhhc
Q 005190 321 -----SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG-HGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 321 -----~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~-aGH~~~le~p~~~~~~I~~~ 389 (709)
.......+.++++|+|+|+|++|.+++++. ++.+++.+++++++++++ +||++++|+|++++..|.++
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~-~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~ 332 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPED-CEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAA 332 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHH
Confidence 013346678899999999999999999997 889999999999999998 99999999999999999943
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=209.93 Aligned_cols=242 Identities=16% Similarity=0.136 Sum_probs=139.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCH--------HH----HHHHHHHHHHHhhccCCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSF--------TG----LVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~--------~~----~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
++|+|||+||++++...|...+..|+++|+|+++|+||||.|+. ++ +++++.++++. .+..+++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~----l~~~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA----KNLSNFI 179 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH----cCCCCeE
Confidence 57899999999999999999999998889999999999999821 11 23344444443 4567899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHH-hH---------HHhhhhhcCc---
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITT-ML---------SSTLSLMTGD--- 265 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~--- 265 (709)
|+||||||.+|+.+|.++|+.++++|+++|......... . ............. .. +.......+.
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~ 257 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDD-K-SEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGP 257 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcch-h-HHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhH
Confidence 999999999999999999999999999998643322111 0 0000000000000 00 0000000000
Q ss_pred -hhhhHH-HHHhhccC----CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH----HhhhHhhhhcccCCccE
Q 005190 266 -PLKMAM-DNVAKRLS----LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK----AASAYANSRLHAVKAQM 335 (709)
Q Consensus 266 -~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i~~Pv 335 (709)
...... ..+..... ..+....+.+.... .......-...+..+. .........+.++++|+
T Consensus 258 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~ 328 (402)
T PLN02894 258 NLVRRYTTARFGAHSTGDILSEEESKLLTDYVYH---------TLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPT 328 (402)
T ss_pred HHHHHHHHHHhhhcccccccCcchhhHHHHHHHH---------hhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCE
Confidence 000000 00000000 00000000000000 0000000000011110 01123345678899999
Q ss_pred EEEeeCCCCCCCcHHHHHHHHhhc-CCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 336 LVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 336 Lvi~G~~D~~v~~~~~~~~l~~~~-~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|+|++|.+.+.. ...+.+.. +.+++++++++||++++|+|++|++.|.+.
T Consensus 329 liI~G~~D~i~~~~--~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~ 381 (402)
T PLN02894 329 TFIYGRHDWMNYEG--AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYA 381 (402)
T ss_pred EEEEeCCCCCCcHH--HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHH
Confidence 99999999887644 45555544 468999999999999999999999999955
|
|
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-22 Score=195.50 Aligned_cols=164 Identities=24% Similarity=0.377 Sum_probs=128.3
Q ss_pred CCceeeccCCCCC-CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccc
Q 005190 436 NGKIVRGLSGIPS-EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514 (709)
Q Consensus 436 ~~~~~~g~e~ip~-~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v 514 (709)
.+++++|.||+|. ++|+|+|+||+++ +|..++.. ..+.++++++..++..|+ ++.+++..|++|+
T Consensus 35 ~~~~v~g~e~lp~~~~p~iiv~NH~S~-~D~~~l~~-----~~~~~~~v~k~~l~~~P~--------~g~~~~~~~~i~v 100 (214)
T PLN02901 35 YKIEVEGLENLPSPDEPAVYVSNHQSF-LDIYTLFH-----LGRPFKFISKTSIFLIPI--------IGWAMYMTGHIPL 100 (214)
T ss_pred eeEEEECCccCCCCCCcEEEEECCCCc-hHHHHHhh-----cCCceEEEEEHHhhhccH--------HHHHHHHCCcEEE
Confidence 4788999999996 6899999999976 68865432 345688999999998754 7778999999999
Q ss_pred cHH----------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhc
Q 005190 515 SGI----------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVL 584 (709)
Q Consensus 515 ~~~----------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~ 584 (709)
+|+ .+.+.|++|.+|+|||||+|+ ...++. ++++|++++|.++|+||||+++.|.++.+
T Consensus 101 ~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~------~~~~~~-~f~~G~~~lA~~~~~pIvPv~i~g~~~~~---- 169 (214)
T PLN02901 101 KRMDRRSQLECLKRCMELLKKGASVFFFPEGTRS------KDGKLA-AFKKGAFSVAAKTGVPVVPITLVGTGKIM---- 169 (214)
T ss_pred ecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCC------CCCccc-CchhhHHHHHHHcCCCEEEEEEecchhhC----
Confidence 873 256688999999999999974 223444 89999999999999999999999977662
Q ss_pred CccccccCccchHHHHHHHhhhhhccccccccccCcccccC-cc-CCCCCceEEEEecCccccCCcccccCCHHHHHHHH
Q 005190 585 DYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-YP-VPKVPGRFYFYFGKPIETKGRKRELRDREKAHELY 662 (709)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-~~-~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~ 662 (709)
| +. ....++++++.+|+||++. +.+++.
T Consensus 170 ----------------------------------------~~~~~~~~~~~~i~v~~~~pi~~~----------~~~~l~ 199 (214)
T PLN02901 170 ----------------------------------------PNGKEGILNPGSVKVVIHPPIEGS----------DADELC 199 (214)
T ss_pred ----------------------------------------cCCCcccccCCeEEEEECCCcCCC----------CHHHHH
Confidence 2 10 1112678999999999875 235677
Q ss_pred HHHHHHHHHHHH
Q 005190 663 LEIKSEVEKCLA 674 (709)
Q Consensus 663 ~~v~~~i~~~~~ 674 (709)
+++++.|++.+.
T Consensus 200 ~~~~~~i~~~~~ 211 (214)
T PLN02901 200 NEARKVIAESLV 211 (214)
T ss_pred HHHHHHHHHHhh
Confidence 777777776653
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=207.72 Aligned_cols=262 Identities=13% Similarity=0.117 Sum_probs=156.9
Q ss_pred ccccccCCCCCC-CCCEEEEeCCCCCCccc-------------HHHHH----HHhcCCceEEEEeCCCC-CCC-------
Q 005190 119 WFSPLECGSHTR-DSPLLLFLPGIDGVGLG-------------LIRQH----QRLGKIFDIWCLHIPVK-DRT------- 172 (709)
Q Consensus 119 ~~~~~~~g~p~~-~~p~Vv~lHG~~~s~~~-------------~~~~~----~~L~~~~~Vi~~Dl~G~-G~S------- 172 (709)
.++|...|.+++ ++|+|||+||++++... |..++ ..+.++|+|+++|++|+ |.|
T Consensus 34 ~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~ 113 (379)
T PRK00175 34 ELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSIN 113 (379)
T ss_pred eEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCC
Confidence 466777776432 36899999999999975 55555 23368999999999993 322
Q ss_pred --------------CHHHHHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhh
Q 005190 173 --------------SFTGLVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237 (709)
Q Consensus 173 --------------s~~~~~~dl~~~l~~~~~~~~~~~-v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~ 237 (709)
+++++++++.+++++ ++.++ ++|+||||||++++.+|.++|++|+++|++++.........
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 114 PDTGKPYGSDFPVITIRDWVRAQARLLDA----LGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCcccCCCCcCCHHHHHHHHHHHHHH----hCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 367889999999987 55667 58999999999999999999999999999998665432211
Q ss_pred hhh---hHHHhhchh------------hhHH-hHHHhhhh-hcCchhhhHHHHHhhcc---------CCchHHHHHHHhH
Q 005190 238 QST---IPLLELIPG------------QITT-MLSSTLSL-MTGDPLKMAMDNVAKRL---------SLQPTIQDLSQDL 291 (709)
Q Consensus 238 ~~~---~~~~~~~~~------------~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 291 (709)
... .......+. .... .+...... ....... ....+.... .............
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDE-LDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHH-HHhhcCccccccccccCCCccchHHHHHHHH
Confidence 000 000000000 0000 00000000 0000000 000000000 0000000000000
Q ss_pred HHhhcchhhhhhcCChhhHHHHHHHHHHhh------hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc---
Q 005190 292 VALSSYLPVLADILPKETLLWKIELLKAAS------AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC--- 362 (709)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~--- 362 (709)
............+......+.... ....+.+.+|++|+|+|+|++|.+++++. ++.+++.++++
T Consensus 269 ------~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~-~~~la~~i~~a~~~ 341 (379)
T PRK00175 269 ------GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPAR-SREIVDALLAAGAD 341 (379)
T ss_pred ------HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHH-HHHHHHHHHhcCCC
Confidence 000111122222222222222211 12456788999999999999999999997 99999999887
Q ss_pred -EEEEEc-CCCccccccChhhHHHHHhhcccccc
Q 005190 363 -EPRNFY-GHGHFLLLEDGVDLVTIIKGASYYRR 394 (709)
Q Consensus 363 -~~~~i~-~aGH~~~le~p~~~~~~I~~~~f~~r 394 (709)
++++++ ++||++++|+|+++++.|. .|+++
T Consensus 342 ~~l~~i~~~~GH~~~le~p~~~~~~L~--~FL~~ 373 (379)
T PRK00175 342 VSYAEIDSPYGHDAFLLDDPRYGRLVR--AFLER 373 (379)
T ss_pred eEEEEeCCCCCchhHhcCHHHHHHHHH--HHHHh
Confidence 777775 9999999999999999999 56554
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=199.26 Aligned_cols=239 Identities=21% Similarity=0.240 Sum_probs=160.0
Q ss_pred CEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCCC---------HHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 133 PLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS---------FTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss---------~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
.+||++||++.+...|..++..| .+||.|+++|+||||.|. ++++.+|+..+++.+....+..+++|+||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 68999999999999999999999 589999999999999994 89999999999999887777889999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc-
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ- 281 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (709)
||||.||+.++.+++..++++||.+|+.......... ..............+ .+..+. ...........+..
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~--~~~~~~~~~~~~~~p----~~~~~~-~~~~~~~~~~~sr~~ 187 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRL--ILARLALKLLGRIRP----KLPVDS-NLLEGVLTDDLSRDP 187 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCChhHHHH--HHHHHhccccccccc----ccccCc-ccccCcCcchhhcCH
Confidence 9999999999999999999999999988765300000 000000000000000 000000 00000000011111
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC-cHHHHHHHHh--h
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP-SQEEGERLSS--A 358 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~-~~~~~~~l~~--~ 358 (709)
...+.+..++. ......+..|....+.............+++|+|+++|++|.+++ .+. ..++.+ .
T Consensus 188 ~~~~~~~~dP~----------~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~-~~~~~~~~~ 256 (298)
T COG2267 188 AEVAAYEADPL----------IGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEG-LARFFERAG 256 (298)
T ss_pred HHHHHHhcCCc----------cccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHH-HHHHHHhcC
Confidence 11122222211 113444555655555544433344567789999999999999999 576 555544 4
Q ss_pred cCCcEEEEEcCCCccccccCh---hhHHHHHhhc
Q 005190 359 LHKCEPRNFYGHGHFLLLEDG---VDLVTIIKGA 389 (709)
Q Consensus 359 ~~~~~~~~i~~aGH~~~le~p---~~~~~~I~~~ 389 (709)
.++.++++++|+.|.++.|.+ +++.+.+.+|
T Consensus 257 ~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~ 290 (298)
T COG2267 257 SPDKELKVIPGAYHELLNEPDRAREEVLKDILAW 290 (298)
T ss_pred CCCceEEecCCcchhhhcCcchHHHHHHHHHHHH
Confidence 457899999999999999955 4556666644
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-21 Score=197.76 Aligned_cols=233 Identities=15% Similarity=0.171 Sum_probs=145.1
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
.++|+|||+||++++...|..+...|. ++|+|+++|+||||.| +++++++++.++++.+. ..++++|+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~v~lv 92 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP---ENEKVILV 92 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC---CCCCEEEE
Confidence 357899999999999999999999995 6899999999999976 66788888888887631 24789999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcC-chhhhHHHHHhhccC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTG-DPLKMAMDNVAKRLS 279 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 279 (709)
||||||.++..++..+|+.++++|++++...... ......+....+... . .........+ ...... .....
T Consensus 93 GhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g--~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~----~~~~~ 164 (273)
T PLN02211 93 GHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLG--FQTDEDMKDGVPDLS-E-FGDVYELGFGLGPDQPP----TSAII 164 (273)
T ss_pred EECchHHHHHHHHHhChhheeEEEEeccccCCCC--CCHHHHHhccccchh-h-hccceeeeeccCCCCCC----ceeee
Confidence 9999999999999999999999999977432110 000000000100000 0 0000000000 000000 00000
Q ss_pred CchHHHHH-HHhHHHhhcchhhhhhcCChhhHHHHHHHHH-----Hhh-hHhhhhcccC-CccEEEEeeCCCCCCCcHHH
Q 005190 280 LQPTIQDL-SQDLVALSSYLPVLADILPKETLLWKIELLK-----AAS-AYANSRLHAV-KAQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 280 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~l~~i-~~PvLvi~G~~D~~v~~~~~ 351 (709)
..+....+ +.+ .+.....+....+. ... ....+....+ ++|+++|.|++|..+|++.
T Consensus 165 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~- 229 (273)
T PLN02211 165 KKEFRRKILYQM--------------SPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQ- 229 (273)
T ss_pred CHHHHHHHHhcC--------------CCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHH-
Confidence 00000000 000 00000000000000 000 0011122345 7899999999999999996
Q ss_pred HHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 352 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 352 ~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+.+.+++.+++.++ +||.+++++|++++++|.+.
T Consensus 230 ~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~ 266 (273)
T PLN02211 230 QEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKA 266 (273)
T ss_pred HHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHH
Confidence 99999999999999996 89999999999999999853
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.6e-21 Score=195.83 Aligned_cols=246 Identities=14% Similarity=0.096 Sum_probs=140.9
Q ss_pred CCEEEEeCCCCCCccc-HHHHHHHhcC-CceEEEEeCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 132 SPLLLFLPGIDGVGLG-LIRQHQRLGK-IFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~-~~~~~~~L~~-~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
+++|||+||++++... |..+...+.+ +|+|+++|+||||.| +++++++++.+++++ .+.+++++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l 100 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK----LGLDKFYL 100 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH----cCCCcEEE
Confidence 5789999998666554 4555566654 899999999999988 246788888888776 44567999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhh-hcCchhhhH-HHHHhh-
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL-MTGDPLKMA-MDNVAK- 276 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~- 276 (709)
+||||||.+++.+|..+|+.++++|++++........ .........++......+...... ...+..... ......
T Consensus 101 iG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV-KELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHH 179 (288)
T ss_pred EEeehHHHHHHHHHHhCccccceeeEecccccchHHH-HHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754322111 000011111111111000000000 000000000 000000
Q ss_pred ccCCchHHHHHHHhHHHhhcchhhhhhc-CChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005190 277 RLSLQPTIQDLSQDLVALSSYLPVLADI-LPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 355 (709)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l 355 (709)
.................. ........ .....+.. .. ..........+.++++|+++++|++|.+ ++.. .+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~-~~~~ 252 (288)
T TIGR01250 180 LLCRTRKWPEALKHLKSG--MNTNVYNIMQGPNEFTI-TG--NLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEA-AREM 252 (288)
T ss_pred hhcccccchHHHHHHhhc--cCHHHHhcccCCccccc-cc--cccccCHHHHhhccCCCEEEEecCCCcc-CHHH-HHHH
Confidence 000000000000000000 00000000 00000000 00 0001112345678999999999999985 5565 7888
Q ss_pred HhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 356 SSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 356 ~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 253 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 286 (288)
T TIGR01250 253 QELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDF 286 (288)
T ss_pred HHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999854
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-21 Score=187.27 Aligned_cols=236 Identities=20% Similarity=0.222 Sum_probs=159.8
Q ss_pred CCEEEEeCCCCCCc-ccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhc--cCCCCCEEE
Q 005190 132 SPLLLFLPGIDGVG-LGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN--RSPKRPVYL 199 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~-~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~--~~~~~~v~L 199 (709)
...|+++||+++.. ..|...+..|+ .||.|+++|++|||.| +++.+++|+...++.++. .....+.+|
T Consensus 54 r~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL 133 (313)
T KOG1455|consen 54 RGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFL 133 (313)
T ss_pred ceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeee
Confidence 44799999998876 67888999994 8999999999999999 889999999999997544 556789999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
.||||||+|++.++.++|+..+|+|+++|........... +....+...+...+|.+.. ...+ .+.....
T Consensus 134 ~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~--p~v~~~l~~l~~liP~wk~-vp~~-------d~~~~~~ 203 (313)
T KOG1455|consen 134 FGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPH--PPVISILTLLSKLIPTWKI-VPTK-------DIIDVAF 203 (313)
T ss_pred eecCcchHHHHHHHhhCCcccccceeeecccccCCccCCC--cHHHHHHHHHHHhCCceee-cCCc-------ccccccc
Confidence 9999999999999999999999999999987655433111 1111111122222222210 0000 0000111
Q ss_pred Cc-hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 280 LQ-PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 280 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
.. +.......++.. ......+....++++ ...+....+.++.+|.+++||++|.++++.. ++.+.+.
T Consensus 204 kdp~~r~~~~~npl~----------y~g~pRl~T~~ElLr-~~~~le~~l~~vtvPflilHG~dD~VTDp~~-Sk~Lye~ 271 (313)
T KOG1455|consen 204 KDPEKRKILRSDPLC----------YTGKPRLKTAYELLR-VTADLEKNLNEVTVPFLILHGTDDKVTDPKV-SKELYEK 271 (313)
T ss_pred CCHHHHHHhhcCCce----------ecCCccHHHHHHHHH-HHHHHHHhcccccccEEEEecCCCcccCcHH-HHHHHHh
Confidence 11 111122222111 112223344444444 2344567889999999999999999999997 9988885
Q ss_pred cC--CcEEEEEcCCCccccc-cChh---hHHHHHhhc
Q 005190 359 LH--KCEPRNFYGHGHFLLL-EDGV---DLVTIIKGA 389 (709)
Q Consensus 359 ~~--~~~~~~i~~aGH~~~l-e~p~---~~~~~I~~~ 389 (709)
.+ +.++.++||+-|.++. |-++ .+...|.+|
T Consensus 272 A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 272 ASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISW 308 (313)
T ss_pred ccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence 54 7899999999999997 4333 344445555
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=202.15 Aligned_cols=237 Identities=20% Similarity=0.234 Sum_probs=149.5
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccC
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~ 192 (709)
++|...|. +++++|||+||++++...|..+...|.++|+|+++|+||||.| +++++++++.++++. .
T Consensus 121 i~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~----~ 194 (371)
T PRK14875 121 VRYLRLGE--GDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA----L 194 (371)
T ss_pred EEEecccC--CCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----c
Confidence 44555554 2467899999999999999999999988899999999999988 678888888888876 4
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
+..+++|+||||||.+++.+|..+|+++.++|++++..............+..... ...+..++.........
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---- 267 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAES---RRELKPVLELLFADPAL---- 267 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccc---hhHHHHHHHHHhcChhh----
Confidence 55689999999999999999999999999999998754322111000000000000 00000111111100000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHH-HHHH--hhhHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIE-LLKA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
............. . .......+..... .+.. ........+.+++||+|+++|++|.+++.+
T Consensus 268 ------~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~ 331 (371)
T PRK14875 268 ------VTRQMVEDLLKYK-R---------LDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA 331 (371)
T ss_pred ------CCHHHHHHHHHHh-c---------cccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH
Confidence 0000000000000 0 0000000000000 0000 001222456788999999999999999987
Q ss_pred HHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 350 EEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 350 ~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
. .+.+ .+++++.+++++||++++|+|+++++.|.+|
T Consensus 332 ~-~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 367 (371)
T PRK14875 332 H-AQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEF 367 (371)
T ss_pred H-Hhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 5 5544 3478999999999999999999999999843
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=200.52 Aligned_cols=233 Identities=15% Similarity=0.186 Sum_probs=149.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
..++|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++.+|+.++++.+....+..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 35689999999999889999999995 7999999999999988 55788899999999988766667899999
Q ss_pred echhHHHHHHHHHhCCC---ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 202 ESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
|||||.+++.++. +|+ .++++|+.+|......... .............+.+.. ...... ....
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~-----~~~~~~~l~~~~~p~~~~-~~~~~~-------~~~~ 280 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP-----IVGAVAPIFSLVAPRFQF-KGANKR-------GIPV 280 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH-----HHHHHHHHHHHhCCCCcc-cCcccc-------cCCc
Confidence 9999999997764 564 7999999988654322110 000000000000000000 000000 0000
Q ss_pred CC-chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005190 279 SL-QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357 (709)
Q Consensus 279 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~ 357 (709)
.. .......+.+... ........+...... ........+.++++|+|+++|++|.+++++. ++.+.+
T Consensus 281 s~~~~~~~~~~~dp~~----------~~g~i~~~~~~~~~~-~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~-a~~l~~ 348 (395)
T PLN02652 281 SRDPAALLAKYSDPLV----------YTGPIRVRTGHEILR-ISSYLTRNFKSVTVPFMVLHGTADRVTDPLA-SQDLYN 348 (395)
T ss_pred CCCHHHHHHHhcCCCc----------ccCCchHHHHHHHHH-HHHHHHhhcccCCCCEEEEEeCCCCCCCHHH-HHHHHH
Confidence 00 0000001100000 000001111111111 1122345678899999999999999999997 888877
Q ss_pred hcC--CcEEEEEcCCCcccccc-ChhhHHHHHhhc
Q 005190 358 ALH--KCEPRNFYGHGHFLLLE-DGVDLVTIIKGA 389 (709)
Q Consensus 358 ~~~--~~~~~~i~~aGH~~~le-~p~~~~~~I~~~ 389 (709)
..+ +.+++++++++|.+++| +++++.+.|.+|
T Consensus 349 ~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~F 383 (395)
T PLN02652 349 EAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDW 383 (395)
T ss_pred hcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHH
Confidence 654 47899999999999887 789999999965
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-20 Score=228.71 Aligned_cols=256 Identities=18% Similarity=0.187 Sum_probs=158.5
Q ss_pred CCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCC---------------HHHHH
Q 005190 114 GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS---------------FTGLV 178 (709)
Q Consensus 114 g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss---------------~~~~~ 178 (709)
++...|++|.+.|. .+++++|||+||++++...|..+...|.+.|+|+++|+||||.|+ +++++
T Consensus 1354 ~~~~~~i~~~~~G~-~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a 1432 (1655)
T PLN02980 1354 DGFSCLIKVHEVGQ-NAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVA 1432 (1655)
T ss_pred CceEEEEEEEecCC-CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHH
Confidence 34456777877775 234678999999999999999999999888999999999999872 45667
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHh-hchhhhH-HhHH
Q 005190 179 KLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQIT-TMLS 256 (709)
Q Consensus 179 ~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 256 (709)
+++.+++++ ...++++|+||||||.+|+.+|.++|++|+++|++++................. ....... ....
T Consensus 1433 ~~l~~ll~~----l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1433 DLLYKLIEH----ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred HHHHHHHHH----hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 777777776 456789999999999999999999999999999998754332211100000000 0000000 0000
Q ss_pred HhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH-HhhhHhhhhcccCCccE
Q 005190 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQM 335 (709)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pv 335 (709)
.....+.... ................... .......+...+..+. .......+.+.++++|+
T Consensus 1509 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~Pt 1571 (1655)
T PLN02980 1509 IFLENWYSGE-------LWKSLRNHPHFNKIVASRL----------LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPL 1571 (1655)
T ss_pred HHHHHhccHH-------HhhhhccCHHHHHHHHHHH----------hcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCE
Confidence 0000000000 0000000000000000000 0000111111111111 01122335688999999
Q ss_pred EEEeeCCCCCCCcHHHHHHHHhhcCC------------cEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 336 LVLCSGKDQLMPSQEEGERLSSALHK------------CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 336 Lvi~G~~D~~v~~~~~~~~l~~~~~~------------~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
|+|+|++|.+++ .. ++++.+.+++ +++++++++||++++|+|+.+++.|. .|+.+.
T Consensus 1572 LlI~Ge~D~~~~-~~-a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~--~FL~~~ 1639 (1655)
T PLN02980 1572 LLVVGEKDVKFK-QI-AQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR--KFLTRL 1639 (1655)
T ss_pred EEEEECCCCccH-HH-HHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH--HHHHhc
Confidence 999999999875 43 6677776665 48999999999999999999999999 555543
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.3e-20 Score=183.10 Aligned_cols=242 Identities=15% Similarity=0.190 Sum_probs=159.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC--CceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
..|+++++||+.|+...|..+...|++ +..|+++|.|.||.| +.+++++|+..+++.+.......+++|+||
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GH 130 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGH 130 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceeccc
Confidence 578899999999999999999999963 579999999999999 789999999999999765545678999999
Q ss_pred chhH-HHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh---chhh------hHHhHHHhhhhhcCchhhhHHH
Q 005190 203 SLGA-CIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL---IPGQ------ITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 203 S~GG-~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
|||| .+++..+..+|+.+..+|+++-..............++.. .+.. .....+.+........
T Consensus 131 smGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~------ 204 (315)
T KOG2382|consen 131 SMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNL------ 204 (315)
T ss_pred CcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchH------
Confidence 9999 8888888899999999999876553211111111111111 1110 0011111111000000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhc--ccCCccEEEEeeCCCCCCCcHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRL--HAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
..+-+..++.. ......+.-..+.+.+...+.-++... .+..+ .....|||++.|.++.+++.+.
T Consensus 205 ----------~~~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~~~s--~~~~l~~~~~~~pvlfi~g~~S~fv~~~~ 271 (315)
T KOG2382|consen 205 ----------VRQFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYEILS--YWADLEDGPYTGPVLFIKGLQSKFVPDEH 271 (315)
T ss_pred ----------HHHHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHHhhc--ccccccccccccceeEEecCCCCCcChhH
Confidence 00000000000 001111111122233332222211111 11222 5668899999999999999996
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhcccccc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 394 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r 394 (709)
-.++.+.+|+++++.+++|||++|+|+|+++.++|.+ |+.+
T Consensus 272 -~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~--Fl~~ 312 (315)
T KOG2382|consen 272 -YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISE--FLEE 312 (315)
T ss_pred -HHHHHHhccchheeecccCCceeecCCHHHHHHHHHH--Hhcc
Confidence 8899999999999999999999999999999999995 6543
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=202.01 Aligned_cols=241 Identities=13% Similarity=0.159 Sum_probs=142.9
Q ss_pred CCCCEEEEeCCCCCCccc-H-HHHHHHh-cCCceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 130 RDSPLLLFLPGIDGVGLG-L-IRQHQRL-GKIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~-~-~~~~~~L-~~~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
+++|+||++||+++++.. | ..++..+ .++|+|+++|+||||.|. ...+.+|+.++++++..+.+..++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~l 177 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYA 177 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEE
Confidence 357899999999877653 4 3455444 789999999999999982 24678899999999988887789999
Q ss_pred EEechhHHHHHHHHHhCCCc--eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhc
Q 005190 200 VGESLGACIALAVAARNPDI--DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~--v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (709)
+||||||.+++.++.++|+. +.++++++++....... ..+...+.. .....+...+....... ..........
T Consensus 178 vG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~-~~~~~~~~~---~y~~~~~~~l~~~~~~~-~~~~~~~~~~ 252 (388)
T PLN02511 178 AGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD-EDFHKGFNN---VYDKALAKALRKIFAKH-ALLFEGLGGE 252 (388)
T ss_pred EEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH-HHHhccHHH---HHHHHHHHHHHHHHHHH-HHHHhhCCCc
Confidence 99999999999999999987 78888776644321111 000000000 00000000000000000 0000000000
Q ss_pred cCCc-----hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 278 LSLQ-----PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 278 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
.... ..+.++...... .. ....... +... .......+.+|++|+|+|+|++|++++.+...
T Consensus 253 ~~~~~~~~~~~~~~fd~~~t~-------~~--~gf~~~~---~yy~--~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~ 318 (388)
T PLN02511 253 YNIPLVANAKTVRDFDDGLTR-------VS--FGFKSVD---AYYS--NSSSSDSIKHVRVPLLCIQAANDPIAPARGIP 318 (388)
T ss_pred cCHHHHHhCCCHHHHHHhhhh-------hc--CCCCCHH---HHHH--HcCchhhhccCCCCeEEEEcCCCCcCCcccCc
Confidence 0000 000000000000 00 0000000 0000 11123577899999999999999999987512
Q ss_pred HHHHhhcCCcEEEEEcCCCccccccChhh------HHHHHhhc
Q 005190 353 ERLSSALHKCEPRNFYGHGHFLLLEDGVD------LVTIIKGA 389 (709)
Q Consensus 353 ~~l~~~~~~~~~~~i~~aGH~~~le~p~~------~~~~I~~~ 389 (709)
..+.+..+++++++++++||+.++|+|+. +.+.|.+|
T Consensus 319 ~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~F 361 (388)
T PLN02511 319 REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEF 361 (388)
T ss_pred HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHH
Confidence 45667889999999999999999999875 46777743
|
|
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=175.25 Aligned_cols=115 Identities=17% Similarity=0.162 Sum_probs=92.8
Q ss_pred CceeeccCCCCC-CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 437 GKIVRGLSGIPS-EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 437 ~~~~~g~e~ip~-~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
|++++|. +|. ++|+|+|+||+++ +|.+++...+.. .++.++++++..+|+.| . +++++.+|+|||+
T Consensus 9 g~~~~g~--~p~~~~~~iiv~NH~S~-~D~~~l~~~~~~-~~~~~~~vak~~l~~~p--------~-g~~~~~~g~i~V~ 75 (163)
T cd07988 9 GWRIEGE--PPNKPKFVVIGAPHTSN-WDFVLGLLAAFA-LGLKISFLGKHSLFKPP--------L-GPFMRWLGGIPVD 75 (163)
T ss_pred CEEEEeE--cCCCCceEEEEECCCcc-HHHHHHHHHHHh-cCCceEEEEEHHhhhCc--------H-HHHHHHcCCEEeE
Confidence 6677774 776 4799999999977 799877765443 46789999999999873 2 6789999999999
Q ss_pred HHH-------HHHHhcCC--CeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeee
Q 005190 516 GIN-------LYKLMSSK--SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 516 ~~~-------~~~~L~~g--~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
|++ +.+.|++| .+|+|||||||+.. . +||+|++++|.++|+||+||++.
T Consensus 76 r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---------~-~fk~G~~~lA~~~~~PIvPv~i~ 133 (163)
T cd07988 76 RSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---------D-KWKTGFYHIARGAGVPILLVYLD 133 (163)
T ss_pred cCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---------c-ChhhHHHHHHHHcCCCEEEEEEe
Confidence 843 44566765 47999999998531 1 78999999999999999999994
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-19 Score=165.01 Aligned_cols=211 Identities=16% Similarity=0.186 Sum_probs=149.6
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+..||||||+.|+....+.+.+.| .+||.|++|.+||||.. ++++|.+++.+..+++.... ...|+++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g-y~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG-YDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC-CCeEEEEeec
Confidence 357999999999999999999999 48999999999999988 78999999999999877433 5789999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhh--hhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVL--QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||.+|+.+|.++| ++++|.++++........ .....+.+.... . .....
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk------------~--------------e~k~~ 145 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKK------------Y--------------EGKDQ 145 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhh------------c--------------cCCCH
Confidence 99999999999999 889999887655322110 111111111000 0 00011
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH- 360 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~- 360 (709)
+..++.+..... .+.........++ ..+...+..|..|+++++|.+|++++.+. +..+.....
T Consensus 146 e~~~~e~~~~~~-----------~~~~~~~~~~~~i----~~~~~~~~~I~~pt~vvq~~~D~mv~~~s-A~~Iy~~v~s 209 (243)
T COG1647 146 EQIDKEMKSYKD-----------TPMTTTAQLKKLI----KDARRSLDKIYSPTLVVQGRQDEMVPAES-ANFIYDHVES 209 (243)
T ss_pred HHHHHHHHHhhc-----------chHHHHHHHHHHH----HHHHhhhhhcccchhheecccCCCCCHHH-HHHHHHhccC
Confidence 222222222111 0122222222222 23346678899999999999999999997 888877544
Q ss_pred -CcEEEEEcCCCccccccCh-hhHHHHHh
Q 005190 361 -KCEPRNFYGHGHFLLLEDG-VDLVTIIK 387 (709)
Q Consensus 361 -~~~~~~i~~aGH~~~le~p-~~~~~~I~ 387 (709)
+.++.+++++||.+..+.. +++.+.|.
T Consensus 210 ~~KeL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 210 DDKELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred CcceeEEEccCCceeecchhHHHHHHHHH
Confidence 6899999999999998854 66777766
|
|
| >KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-20 Score=183.60 Aligned_cols=189 Identities=19% Similarity=0.189 Sum_probs=155.7
Q ss_pred hcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHHHHHHHhcCC---CeEEEecCchhhhhccCCccceeccC
Q 005190 476 SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSK---SHVLLYPGGVREALHRKGEEYKLFWP 552 (709)
Q Consensus 476 ~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~~~~~~L~~g---~~v~ifPeG~r~~~~~~~~~~~l~~~ 552 (709)
.++.+..++....|..|+ +|+++++.|.+.++|+++..+|.++ .+|+|.+||..|++......+.|.++
T Consensus 133 Pgi~~~l~tl~~~F~~P~--------~Re~l~~~Gl~svSk~s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk 204 (334)
T KOG0831|consen 133 PGIRPKLMTLSGQFYTPF--------LREYLMSLGLCSVSRESIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLK 204 (334)
T ss_pred CCCCHHHcccccceeccH--------HHHHHHHcCCccccHHHHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEe
Confidence 346777888888887755 9999999999999999999999764 89999999999999888888999999
Q ss_pred CChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccc-cC--ccCC
Q 005190 553 ESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMH-MP--YPVP 629 (709)
Q Consensus 553 ~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~p--~~~p 629 (709)
.|+||+|||+++|+++||++.+||+|+|+++.+..+ ..+..++.++++... ..+-+.+++-+ .+ |++|
T Consensus 205 ~RkGFVklAl~tGs~LVP~~sFGE~di~~q~~np~~-s~lr~~Q~~~k~~~g--------f~~~~f~grg~~~~~~gllP 275 (334)
T KOG0831|consen 205 NRKGFVKLALQTGASLVPVFSFGENDVYKQVENPKG-SRLRKFQEWFKKIFG--------FTPPIFYGRGFFQYTFGLLP 275 (334)
T ss_pred ccccHHHHHHHhCCCcCceeecccceeeeeecCCCc-chhHHHHHHHHHhcC--------cccceEeccccccccccccc
Confidence 999999999999999999999999999988877664 223345555554432 22333333332 33 7788
Q ss_pred CCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 005190 630 KVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDP 684 (709)
Q Consensus 630 ~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~l~~~r~~~~ 684 (709)
. +.++.+++|+||+++ +.+.+++|+++++++++.++++++++++|.+..-++
T Consensus 276 ~-r~pi~~VVG~Pi~v~--k~~~Pt~e~id~~H~~y~~~L~~LF~~hK~k~g~~~ 327 (334)
T KOG0831|consen 276 F-RRPITTVVGEPIPVP--KTENPTQEQIDKYHGLYIDALRKLFDEHKTKYGVPE 327 (334)
T ss_pred c-cCcceeEecCccCCc--cCcCCCHHHHHHHHHHHHHHHHHHHHhhccccCCCh
Confidence 7 789999999999999 567889999999999999999999999998875544
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-19 Score=184.50 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=83.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|.+ ++++|||+||++++...+ .+...+ .++|+|+++|+||||.| +.+++++|+..++++
T Consensus 16 ~l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~- 91 (306)
T TIGR01249 16 QLYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK- 91 (306)
T ss_pred EEEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-
Confidence 3456666643 456799999988776554 344445 46899999999999988 245677888777776
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+.++++++||||||.+++.+|.++|+.++++|++++...
T Consensus 92 ---l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 92 ---LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred ---cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 4567899999999999999999999999999999987554
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-19 Score=186.25 Aligned_cols=234 Identities=14% Similarity=0.111 Sum_probs=143.3
Q ss_pred CCEEEEeCCCCCCcc-cH-------------------------HHHHHHh-cCCceEEEEeCCCCCCC-----------C
Q 005190 132 SPLLLFLPGIDGVGL-GL-------------------------IRQHQRL-GKIFDIWCLHIPVKDRT-----------S 173 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~-~~-------------------------~~~~~~L-~~~~~Vi~~Dl~G~G~S-----------s 173 (709)
..+|+++||++++.. .| ..+++.| .+||.|+++|+||||.| +
T Consensus 21 kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~ 100 (332)
T TIGR01607 21 IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINC 100 (332)
T ss_pred eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchhh
Confidence 458999999998885 21 4578888 57999999999999987 4
Q ss_pred HHHHHHHHHHHHHHhhc-------------------cCC-CCCEEEEEechhHHHHHHHHHhCCC--------ceeEEEE
Q 005190 174 FTGLVKLVESTVRSESN-------------------RSP-KRPVYLVGESLGACIALAVAARNPD--------IDLVLIL 225 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~-------------------~~~-~~~v~LvGhS~GG~iAl~~A~~~P~--------~v~~lVl 225 (709)
++++++|+..+++.+.. ..+ ..|++|+||||||.+++.++..+++ .++|+|+
T Consensus 101 ~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~ 180 (332)
T TIGR01607 101 FDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCIS 180 (332)
T ss_pred HHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEE
Confidence 68889999999987654 233 5689999999999999999876543 5889998
Q ss_pred ecCCCCcchhhhh---hhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc-hHHHHHHHhHHHhhcchhhh
Q 005190 226 VNPATSFNKSVLQ---STIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ-PTIQDLSQDLVALSSYLPVL 301 (709)
Q Consensus 226 ~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 301 (709)
++|+......... ........+. ..+..+...+.... ....... ...+....|...
T Consensus 181 ~s~~~~i~~~~~~~~~~~~~~~~~l~----~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~Dp~~-------- 240 (332)
T TIGR01607 181 LSGMISIKSVGSDDSFKFKYFYLPVM----NFMSRVFPTFRISK--------KIRYEKSPYVNDIIKFDKFR-------- 240 (332)
T ss_pred eccceEEecccCCCcchhhhhHHHHH----HHHHHHCCcccccC--------ccccccChhhhhHHhcCccc--------
Confidence 8886543111000 0000000000 00001100000000 0000000 111111111110
Q ss_pred hhcCChhhHHHHHHHHHHhhhHhhhhcccC--CccEEEEeeCCCCCCCcHHHHHHHHhhc--CCcEEEEEcCCCcccccc
Q 005190 302 ADILPKETLLWKIELLKAASAYANSRLHAV--KAQMLVLCSGKDQLMPSQEEGERLSSAL--HKCEPRNFYGHGHFLLLE 377 (709)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLvi~G~~D~~v~~~~~~~~l~~~~--~~~~~~~i~~aGH~~~le 377 (709)
.-...+..+...++.... .....+..+ ++|+|+++|++|.+++++. +..+.+.. ++++++++++++|.++.|
T Consensus 241 --~~~~~s~~~~~~l~~~~~-~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~-~~~~~~~~~~~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 241 --YDGGITFNLASELIKATD-TLDCDIDYIPKDIPILFIHSKGDCVCSYEG-TVSFYNKLSISNKELHTLEDMDHVITIE 316 (332)
T ss_pred --cCCcccHHHHHHHHHHHH-HHHhhHhhCCCCCCEEEEEeCCCCccCHHH-HHHHHHhccCCCcEEEEECCCCCCCccC
Confidence 001122333333333221 122334555 7999999999999999997 77776654 578999999999999998
Q ss_pred C-hhhHHHHHhhc
Q 005190 378 D-GVDLVTIIKGA 389 (709)
Q Consensus 378 ~-p~~~~~~I~~~ 389 (709)
. .+++.+.|.+|
T Consensus 317 ~~~~~v~~~i~~w 329 (332)
T TIGR01607 317 PGNEEVLKKIIEW 329 (332)
T ss_pred CCHHHHHHHHHHH
Confidence 5 57888888866
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-19 Score=183.74 Aligned_cols=129 Identities=28% Similarity=0.424 Sum_probs=106.1
Q ss_pred ccCCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcc
Q 005190 434 LANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 513 (709)
Q Consensus 434 ~~~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~ 513 (709)
...+++|+|.||+|.++|+|+|+||+++ +|.+++...+.... .++++++..+|+.|+ ++++++..|+|+
T Consensus 48 ~~~r~~v~G~e~lp~~~~~ivvaNH~S~-~D~~~l~~~~~~~~--~~~f~~k~~l~~~p~--------~g~~~~~~~~i~ 116 (255)
T COG0204 48 FGLRVEVEGLENLPKGGPALVVANHQSF-LDPLLLSLALPRRG--PVRFVAKKELFKVPL--------LGWLLRLLGAIP 116 (255)
T ss_pred hCceEEEEeeecCCCCCCEEEEECchhh-hhHHHHhhhcCCCc--ceEEEeehhhccCch--------HHHHHHHcCeeE
Confidence 4458899999999998999999999985 79988887755332 699999999998743 788999999999
Q ss_pred ccHHH---------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhh
Q 005190 514 VSGIN---------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 579 (709)
Q Consensus 514 v~~~~---------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~ 579 (709)
++|++ +..++++|..++|||||||... ..++. ++|+|++++|.++++||+|+++.|..+.
T Consensus 117 v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~-----~~~~~-~~k~g~~~~a~~~~~PivPv~i~g~~~~ 185 (255)
T COG0204 117 VDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRG-----GEELL-PFKRGAARLALEAGVPIVPVAIVGAEEL 185 (255)
T ss_pred ecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCC-----ccccC-CCcchHHHHHHHcCCCEEeEEEeCCccc
Confidence 99955 2334455799999999999422 12233 8999999999999999999999997665
|
|
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-19 Score=177.41 Aligned_cols=177 Identities=14% Similarity=0.152 Sum_probs=125.1
Q ss_pred cCCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccc
Q 005190 435 ANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514 (709)
Q Consensus 435 ~~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v 514 (709)
..+++++|.||+| ++|+|+|+||+++ +|.+++... ...+++++..+++.|+ ++.+++.+|++++
T Consensus 10 ~~~~~v~g~~~~p-~~~~iiv~NH~S~-~D~~~l~~~------~~~~fv~k~el~~~p~--------~g~~~~~~g~i~v 73 (211)
T cd07991 10 FYVIKVHGKPDPP-EAPRIIVANHTSF-IDPLILFSD------LFPSIVAKKELGKLPF--------IGTILRALGCIFV 73 (211)
T ss_pred EEEEEEECCCCCC-CCCeEEEECCCcH-HHHHHHhhh------cCcEEEEehhhccCcH--------HHHHHHhCCceEE
Confidence 3477899999999 7899999999976 699777665 3477899999987643 7889999999999
Q ss_pred cHHH----------HHHHhc--CCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhh
Q 005190 515 SGIN----------LYKLMS--SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQI 582 (709)
Q Consensus 515 ~~~~----------~~~~L~--~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~ 582 (709)
+|++ +.+.++ +|.+|+|||||||+ ....+. +||+|++ ++++||+||++.|.......
T Consensus 74 ~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs------~~~~l~-~Fk~gaf----~~~~pI~Pv~i~~~~~~~~~ 142 (211)
T cd07991 74 DRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTT------NGKALI-MFKKGAF----EPGVPVQPVAIRYPNKFVDA 142 (211)
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCCeEEEecCcccc------CCCEEE-eeccccc----cCCCeeEEEEEEecCccCCc
Confidence 8854 234556 47999999999984 223555 9999976 48999999999886553111
Q ss_pred hcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHH
Q 005190 583 VLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELY 662 (709)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~ 662 (709)
...... ...+..+++ ++...++++.+.||+||+++ . +.++.+++.
T Consensus 143 ~~~~~~---~~~~~~l~~--------------------------~l~~~~~~v~v~~l~pi~~~-~-----~~~~~~~l~ 187 (211)
T cd07991 143 FWNSSG---YSSLMYLFR--------------------------LLTQPANVLEVEFLPVYTPS-E-----EGEDPKEFA 187 (211)
T ss_pred ccCCCC---ccHHHHHHH--------------------------HhCCcceEEEEEECCCcccc-c-----CCCCHHHHH
Confidence 111100 000000111 01223788999999999984 2 234667788
Q ss_pred HHHHHHHHHHH
Q 005190 663 LEIKSEVEKCL 673 (709)
Q Consensus 663 ~~v~~~i~~~~ 673 (709)
++++++|.+.+
T Consensus 188 ~~v~~~i~~~l 198 (211)
T cd07991 188 NRVRLIMANKL 198 (211)
T ss_pred HHHHHHHHHhc
Confidence 88888887765
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=183.70 Aligned_cols=229 Identities=14% Similarity=0.128 Sum_probs=134.8
Q ss_pred CCCEEEEeCCCCCCccc--HHHHHHHh-cCCceEEEEeCCCCCCCCH-------HHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRTSF-------TGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~-------~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
..|+||++||++++... +..++..| .+||+|+++|+||||.+.. ....+|+..+++.++...+..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 57899999999887543 44577777 5899999999999997721 23468888888888777777899999
Q ss_pred EechhHHHHHHHHHhCCCc--eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 201 GESLGACIALAVAARNPDI--DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~--v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
||||||.+++.+++.+++. +.++|+++++........ .+....... ....+ ...+... ............
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~-~~~~~~~~~---~~~~l---~~~l~~~-~~~~~~~~~~~~ 208 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY-RMEQGFSRV---YQRYL---LNLLKAN-AARKLAAYPGTL 208 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH-HHhhhHHHH---HHHHH---HHHHHHH-HHHHHHhccccc
Confidence 9999999998888887654 788888887554322111 000000000 00000 0000000 000000000000
Q ss_pred CCc-hHHHHHHHhHHHhhcchhhhhhcC--ChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005190 279 SLQ-PTIQDLSQDLVALSSYLPVLADIL--PKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 355 (709)
Q Consensus 279 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l 355 (709)
... +.+... ....++.+.+ +...+....+.... ......+.++++|+++|+|++|++++++. ...+
T Consensus 209 ~~~~~~~~~~--------~~~~~fd~~~~~~~~g~~~~~~~y~~--~~~~~~l~~i~~P~lii~g~~D~~~~~~~-~~~~ 277 (324)
T PRK10985 209 PINLAQLKSV--------RRLREFDDLITARIHGFADAIDYYRQ--CSALPLLNQIRKPTLIIHAKDDPFMTHEV-IPKP 277 (324)
T ss_pred cCCHHHHhcC--------CcHHHHhhhheeccCCCCCHHHHHHH--CChHHHHhCCCCCEEEEecCCCCCCChhh-ChHH
Confidence 000 000000 0000000000 00011111111111 11235678899999999999999999886 7777
Q ss_pred HhhcCCcEEEEEcCCCccccccC
Q 005190 356 SSALHKCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 356 ~~~~~~~~~~~i~~aGH~~~le~ 378 (709)
.+..+++++++++++||+.++|.
T Consensus 278 ~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 278 ESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred HHhCCCeEEEECCCCCceeeCCC
Confidence 77888999999999999999885
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=178.04 Aligned_cols=260 Identities=13% Similarity=0.100 Sum_probs=159.7
Q ss_pred cccccccCCCCCC-CCCEEEEeCCCCCCccc-------------HHHHHH---Hh-cCCceEEEEeCCCCCC--------
Q 005190 118 RWFSPLECGSHTR-DSPLLLFLPGIDGVGLG-------------LIRQHQ---RL-GKIFDIWCLHIPVKDR-------- 171 (709)
Q Consensus 118 ~~~~~~~~g~p~~-~~p~Vv~lHG~~~s~~~-------------~~~~~~---~L-~~~~~Vi~~Dl~G~G~-------- 171 (709)
..+.|...|.++. ..++||++|++.++... |..++- .| .+.|.|+++|..|-|.
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 5678888887543 35789999999886532 333321 23 2579999999998642
Q ss_pred ------------C--------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 172 ------------T--------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 172 ------------S--------s~~~~~~dl~~~l~~~~~~~~~~~v~-LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
+ ++.++++++..++++ ++.+++. ++||||||++|+.+|.++|++|+++|++++..
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~----lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKS----LGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHH----cCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 1 568888998888877 5667776 99999999999999999999999999998755
Q ss_pred Ccchhh-hhhhh---HHHhhchhh-----------hH--HhHHHhhhhhcCchhhhHHHHHhhc--cC--------CchH
Q 005190 231 SFNKSV-LQSTI---PLLELIPGQ-----------IT--TMLSSTLSLMTGDPLKMAMDNVAKR--LS--------LQPT 283 (709)
Q Consensus 231 ~~~~~~-~~~~~---~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~ 283 (709)
...... ..... ..+..-|.. .. .....+............ ...... .. ....
T Consensus 197 ~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~-~~f~r~~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYE-TTFPRNASIEVDPYEKVSTLTS 275 (389)
T ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHH-HHcCcCccccccccccccchhh
Confidence 432221 11110 111111100 00 000000000000000000 000000 00 0000
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhh-----HhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASA-----YANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
.+...... ...+........+....+.+..++. +..+.+.++++|+|+|+|++|.++|++. .+.+.+.
T Consensus 276 ~e~yl~~~------~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~-~~~la~~ 348 (389)
T PRK06765 276 FEKEINKA------TYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRY-NYKMVDI 348 (389)
T ss_pred HHHHHHHH------HHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHH-HHHHHHH
Confidence 11111100 0112233444555555555544321 3456788999999999999999999996 8888888
Q ss_pred cC----CcEEEEEcC-CCccccccChhhHHHHHhhc
Q 005190 359 LH----KCEPRNFYG-HGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 359 ~~----~~~~~~i~~-aGH~~~le~p~~~~~~I~~~ 389 (709)
++ +++++++++ +||+.++|+|+++++.|.++
T Consensus 349 lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~F 384 (389)
T PRK06765 349 LQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEF 384 (389)
T ss_pred hhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHH
Confidence 85 689999985 99999999999999999943
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=198.91 Aligned_cols=257 Identities=13% Similarity=0.085 Sum_probs=142.9
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~ 190 (709)
++|...|.+ ++|+|||+||++++...|..+.+.|+++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 15 l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~- 91 (582)
T PRK05855 15 LAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS- 91 (582)
T ss_pred EEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC-
Confidence 455555542 477899999999999999999999998999999999999998 46889999999998842
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhh----cC
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM----TG 264 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 264 (709)
...+++|+||||||.+++.++... ++.+..++.+++........+... ......+.............. ..
T Consensus 92 --~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (582)
T PRK05855 92 --PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRS-GLRRPTPRRLARALGQLLRSWYIYLFH 168 (582)
T ss_pred --CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhh-cccccchhhhhHHHHHHhhhHHHHHHh
Confidence 234699999999999998887662 444544444433211000000000 000000000000000000000 00
Q ss_pred chhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhh--cCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLAD--ILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
.+.... ...... ........................ .............. ........+..+++|+|+|+|++
T Consensus 169 ~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~lii~G~~ 243 (582)
T PRK05855 169 LPVLPE-LLWRLG--LGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANM--IRSLSRPRERYTDVPVQLIVPTG 243 (582)
T ss_pred CCCCcH-HHhccc--hhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhh--hhhhccCccCCccCceEEEEeCC
Confidence 000000 000000 000000000000000000000000 00000000000000 00111123456899999999999
Q ss_pred CCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 343 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|.++++.. .+.+.+..++.++++++ +||++++|+|+++++.|.+|
T Consensus 244 D~~v~~~~-~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 288 (582)
T PRK05855 244 DPYVRPAL-YDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEF 288 (582)
T ss_pred CcccCHHH-hccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHH
Confidence 99999986 88888888888888886 69999999999999999955
|
|
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=166.61 Aligned_cols=190 Identities=14% Similarity=0.092 Sum_probs=130.1
Q ss_pred cCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHHH----
Q 005190 443 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN---- 518 (709)
Q Consensus 443 ~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~~---- 518 (709)
.||||.++++|++|||++. +|.+++...+. +...+||+..+|..... ..-.+..+.+++..|++||.|+.
T Consensus 15 ~e~ip~~~~vIl~sNH~S~-~Dp~ii~~~~~----r~~~~lAk~~lf~ag~~-~~~~pl~~~f~~~~~~~pV~r~k~~~~ 88 (235)
T cd07985 15 EEQLAQGHNVVLLANHQTE-ADPAVISLLLE----KTHPYLAENMIYVAGDR-VVSDPLCKPFSMGRNLLCVHSKKHIDD 88 (235)
T ss_pred HHhccCCCCEEEEECCccc-ccHHHHHHHhc----cccHHHhhhhheecccc-ccccHhHHHHHhhCCceeeecCccccc
Confidence 5899999999999999976 69988888854 45688999999832100 01124478899999999997753
Q ss_pred ------------------HHHHhcCCCe-EEEecCchhhhhccCCccceeccCCC----hhHHHHHHHcCCc--EEEeee
Q 005190 519 ------------------LYKLMSSKSH-VLLYPGGVREALHRKGEEYKLFWPES----SEFVRMATTFGAK--IVPFGA 573 (709)
Q Consensus 519 ------------------~~~~L~~g~~-v~ifPeG~r~~~~~~~~~~~l~~~~k----~G~~~lA~~~~~p--IvPv~~ 573 (709)
+.++|++|+. |+|||||||+.....++-.. . +|. .+|.+||.++|+| |+|+++
T Consensus 89 ~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p-~-~Fd~~~~~~~~~La~~s~~p~hi~Plai 166 (235)
T cd07985 89 PPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYP-D-PFDPSAVEMMRLLAQKSRVPTHLYPMAL 166 (235)
T ss_pred chhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccC-C-ccchHHHHHHHHHHHhcCCCceEEeeEE
Confidence 4567899977 88999999975433322211 1 344 5689999999999 999999
Q ss_pred ecchhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccc-c
Q 005190 574 VGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRE-L 652 (709)
Q Consensus 574 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~-~ 652 (709)
. +.|+..-. ..+.+.++. . -.. ..+++.+.||+||...+.... .
T Consensus 167 ~-~ydi~Ppp------------~~v~~~ige---------------~------r~~-~f~~v~i~vg~~i~~~~~~~~~~ 211 (235)
T cd07985 167 L-TYDIMPPP------------KQVEKEIGE---------------K------RAV-AFTGVGLAVGEEIDFSAIAATHK 211 (235)
T ss_pred E-eecccCCC------------ccccccccc---------------c------ccc-cccceEEEecCCccchhhhcccC
Confidence 8 44441000 000000000 0 011 257899999999999865322 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 005190 653 RDREKAHELYLEIKSEVEKCLAY 675 (709)
Q Consensus 653 ~~~~~~~~~~~~v~~~i~~~~~~ 675 (709)
+.++..+++.+++.++|.++++.
T Consensus 212 d~~e~~~~~~~~i~~~v~~~y~~ 234 (235)
T cd07985 212 DPEEVREAFSKAAFDSVKRLYNV 234 (235)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc
Confidence 34678888999999998888754
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). |
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-18 Score=204.70 Aligned_cols=178 Identities=14% Similarity=0.052 Sum_probs=130.7
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG 516 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~ 516 (709)
|+++.|.||+|.++|+|+|+||+++ +|.+++...+ ++.+.++++..+++.|+ ++.+++..|+||++|
T Consensus 15 ~~~v~g~~~~~~~~~~i~v~NH~s~-~D~~~l~~~~----~~~~~~~~k~~l~~~~~--------~~~~~~~~~~i~v~r 81 (718)
T PRK08043 15 RVRVTGDTQALKGERVLITPNHVSF-LDGILLALFL----PVRPVFAVYTSISQQWY--------MRWLKPYIDFVPLDP 81 (718)
T ss_pred EEEEEccccCCCCCCEEEEECCCch-HHHHHHHHhC----CCCeEEEEeHHHhhhHH--------HHHHHHhCCEEEecC
Confidence 7789999999999999999999976 7998887764 34577888999998754 788899999999998
Q ss_pred HH------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccccc
Q 005190 517 IN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQM 590 (709)
Q Consensus 517 ~~------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~ 590 (709)
++ +.+.|++|..|+|||||||+ ...++. +||+|++++|.++|+|||||++.|.+... +..
T Consensus 82 ~~~~~~~~~~~~l~~g~~~~iFPEGtr~------~~~~~~-~~k~G~~~~a~~~~~pivPv~i~g~~~~~---~~~---- 147 (718)
T PRK08043 82 TKPMAIKHLVRLVEQGRPVVIFPEGRIT------VTGSLM-KIYDGAGFVAAKSGATVIPVRIEGAELTH---FSR---- 147 (718)
T ss_pred CCHHHHHHHHHHHhCCCEEEEeCCCccC------CCCCcc-CcchHHHHHHHHCCCCEEEEEEECCccCc---ccc----
Confidence 54 56789999999999999984 223444 89999999999999999999999865420 000
Q ss_pred cCccchHHHHHHHhhhhhccccccccccCcccccCccCC-CCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHH
Q 005190 591 KIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVP-KVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEV 669 (709)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p-~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v~~~i 669 (709)
+.+.+. ....++.+.||+|++..-. ....++++.+.+.+++++.|
T Consensus 148 ---------------------------------~~~~~~~~~~~~i~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 193 (718)
T PRK08043 148 ---------------------------------LKGLVKRRLFPQITLHILPPTQLPMP-DAPRARDRRKLAGEMLHQIM 193 (718)
T ss_pred ---------------------------------cCCccccccCCceEEEecCcccCCCC-CCccHHHHHHHHHHHHHHHH
Confidence 000011 1134688999999765411 12224555666666666666
Q ss_pred HHHHHH
Q 005190 670 EKCLAY 675 (709)
Q Consensus 670 ~~~~~~ 675 (709)
++.+.+
T Consensus 194 ~~~~~~ 199 (718)
T PRK08043 194 MEARMA 199 (718)
T ss_pred HHHHhh
Confidence 665433
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-17 Score=163.76 Aligned_cols=236 Identities=14% Similarity=0.111 Sum_probs=148.2
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~-G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
..++||+.||+++....+..+++.| .+||.|+.+|.+|| |.| +......|+..++++++... ..++.|+|
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG 114 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIA 114 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEE
Confidence 4578999999999877788999999 58999999999988 888 34456789999999987754 57899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||||.+|+.+|... .++++|+.+|.......-..........++. ...+..+. +.+.. .
T Consensus 115 ~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~---~~lp~~~d-~~g~~-------------l- 174 (307)
T PRK13604 115 ASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYLSLPI---DELPEDLD-FEGHN-------------L- 174 (307)
T ss_pred ECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccccCcc---cccccccc-ccccc-------------c-
Confidence 999999997777643 3888999988666431111000000000000 00000000 00000 0
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH- 360 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~- 360 (709)
....+..+... ..... .....+.+.++++|+|+|||++|.+||.+. ++.+.+..+
T Consensus 175 -~~~~f~~~~~~-----------~~~~~-----------~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~-s~~l~e~~~s 230 (307)
T PRK13604 175 -GSEVFVTDCFK-----------HGWDT-----------LDSTINKMKGLDIPFIAFTANNDSWVKQSE-VIDLLDSIRS 230 (307)
T ss_pred -cHHHHHHHHHh-----------cCccc-----------cccHHHHHhhcCCCEEEEEcCCCCccCHHH-HHHHHHHhcc
Confidence 00011111000 00000 001113346678999999999999999997 888888664
Q ss_pred -CcEEEEEcCCCccccccChh---hHHHHHhhcccccccCCCCCCcccCCCChHhH
Q 005190 361 -KCEPRNFYGHGHFLLLEDGV---DLVTIIKGASYYRRGRNHDYVSDFMPPTSSEF 412 (709)
Q Consensus 361 -~~~~~~i~~aGH~~~le~p~---~~~~~I~~~~f~~r~~~~~~v~d~~~p~~~e~ 412 (709)
++++++++|++|.+.. ++. .|.+.+.+...--.+...|...++..|+-+..
T Consensus 231 ~~kkl~~i~Ga~H~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (307)
T PRK13604 231 EQCKLYSLIGSSHDLGE-NLVVLRNFYQSVTKAAIALDNGSLDLDVDIIEPSFEDL 285 (307)
T ss_pred CCcEEEEeCCCccccCc-chHHHHHHHHHHHHHHheecCCcccccccccCCCHHHH
Confidence 7999999999998874 332 23333333333335567778888888875444
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-17 Score=162.07 Aligned_cols=213 Identities=20% Similarity=0.246 Sum_probs=122.5
Q ss_pred ceEEEEeCCCCCCCC-----------HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 005190 159 FDIWCLHIPVKDRTS-----------FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVN 227 (709)
Q Consensus 159 ~~Vi~~Dl~G~G~Ss-----------~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~ 227 (709)
|+|+++|+||+|.|+ .+++++++..+++. ++.++++++||||||.+++.+|+.+|++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA----LGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH----HTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH----hCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEe
Confidence 789999999999994 25666666666665 677789999999999999999999999999999998
Q ss_pred CCCCcchhhhhhh-hH--HHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhc
Q 005190 228 PATSFNKSVLQST-IP--LLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADI 304 (709)
Q Consensus 228 p~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (709)
++........... .. +.......................... ...... ........... ...+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~-----~~~~~~~ 145 (230)
T PF00561_consen 77 PPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ-FFAYDR-----EFVEDFLKQFQ-----SQQYARF 145 (230)
T ss_dssp ESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-----HHHHTHHHHHH-----HHHHHHT
T ss_pred eeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh-eeeccC-----ccccchhhccc-----hhhhhHH
Confidence 8530000000000 00 000000000000000000000000000 000000 00000000000 0000000
Q ss_pred CChhhHHHHHH--HHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhH
Q 005190 305 LPKETLLWKIE--LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDL 382 (709)
Q Consensus 305 ~~~~~~~~~~~--~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~ 382 (709)
........... ............+.++++|+++++|++|+++|+.. ...+.+.+|+.++++++++||+.+++.|+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~-~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~ 224 (230)
T PF00561_consen 146 AETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPES-SEQLAKLIPNSQLVLIEGSGHFAFLEGPDEF 224 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHH-HHHHHHHSTTEEEEEETTCCSTHHHHSHHHH
T ss_pred HHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHH-HHHHHHhcCCCEEEECCCCChHHHhcCHHhh
Confidence 00000000000 01111122345677899999999999999999997 8889999999999999999999999999999
Q ss_pred HHHHh
Q 005190 383 VTIIK 387 (709)
Q Consensus 383 ~~~I~ 387 (709)
++.|.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 99886
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-18 Score=154.49 Aligned_cols=225 Identities=17% Similarity=0.101 Sum_probs=152.4
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCc-ccHHHHHHHhc--CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVG-LGLIRQHQRLG--KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~-~~~~~~~~~L~--~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~ 188 (709)
.+.|...|. +...||+++|.-|+. ..|.++...+- ..+.|+++|.||||.| ..+-..+|..+.++..
T Consensus 32 ql~y~~~G~---G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM 108 (277)
T KOG2984|consen 32 QLGYCKYGH---GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLM 108 (277)
T ss_pred eeeeeecCC---CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHH
Confidence 566777776 444799999986665 57888888773 2399999999999999 3344444444444433
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
.. +...++.++|+|=||..|+.+|+++++.|..+|+.+..+..+........ .+.+ ...+.
T Consensus 109 ~a-Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~k----giRd----v~kWs---------- 169 (277)
T KOG2984|consen 109 EA-LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFK----GIRD----VNKWS---------- 169 (277)
T ss_pred HH-hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHh----chHH----Hhhhh----------
Confidence 33 44689999999999999999999999999999998876654433211111 1000 00000
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHH----HHHHHHHHhh-----hHhhhhcccCCccEEEEe
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLL----WKIELLKAAS-----AYANSRLHAVKAQMLVLC 339 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~l~~i~~PvLvi~ 339 (709)
.+..+.+. +.+..+.+. .+.+....+. ......+.+++||+|+++
T Consensus 170 ----------------~r~R~P~e----------~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~h 223 (277)
T KOG2984|consen 170 ----------------ARGRQPYE----------DHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMH 223 (277)
T ss_pred ----------------hhhcchHH----------HhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEee
Confidence 00000000 001111111 1111111111 123456799999999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhcccccc
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 394 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r 394 (709)
|++|++++... +..+....+.+++.++|.++|.+++.-+++|+..+. +|++.
T Consensus 224 G~kDp~~~~~h-v~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~--dFl~~ 275 (277)
T KOG2984|consen 224 GGKDPFCGDPH-VCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVL--DFLKS 275 (277)
T ss_pred CCcCCCCCCCC-ccchhhhcccceEEEccCCCcceeeechHHHHHHHH--HHHhc
Confidence 99999999998 888888999999999999999999999999999999 66654
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.8e-17 Score=165.54 Aligned_cols=227 Identities=15% Similarity=0.111 Sum_probs=134.9
Q ss_pred CCEEEEeCCCCC----CcccHHHHHHHhc-CCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccC-CCCCEEEE
Q 005190 132 SPLLLFLPGIDG----VGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRS-PKRPVYLV 200 (709)
Q Consensus 132 ~p~Vv~lHG~~~----s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~-~~~~v~Lv 200 (709)
++.||++||..+ +...|..+++.|+ ++|+|+++|++|||.| +++++.+|+.++++.++... +.++++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~ 105 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAW 105 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEE
Confidence 456777777653 3334666788885 6899999999999998 66788899999999987654 34679999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhch-hhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIP-GQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
||||||.+++.+|.. ++.++++|+++|........... ...... ..... +...... ......
T Consensus 106 G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~-----------~~g~~~ 168 (274)
T TIGR03100 106 GLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS---RIRHYYLGQLLS--ADFWRKL-----------LSGEVN 168 (274)
T ss_pred EECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH---HHHHHHHHHHhC--hHHHHHh-----------cCCCcc
Confidence 999999999998765 56899999999864322111110 000000 00000 0000000 000000
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH----HHH
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG----ERL 355 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~----~~l 355 (709)
.......+......... ....... ..........+..+++|+|+++|+.|...+..... ..+
T Consensus 169 ~~~~~~~~~~~~~~~~~--------~~~~~~~------~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~ 234 (274)
T TIGR03100 169 LGSSLRGLGDALLKARQ--------KGDEVAH------GGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAW 234 (274)
T ss_pred HHHHHHHHHHHHHhhhh--------cCCCccc------chHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhh
Confidence 00111111111000000 0000000 00222334566778999999999999986422100 445
Q ss_pred Hhhc--CCcEEEEEcCCCccccccCh-hhHHHHHhhc
Q 005190 356 SSAL--HKCEPRNFYGHGHFLLLEDG-VDLVTIIKGA 389 (709)
Q Consensus 356 ~~~~--~~~~~~~i~~aGH~~~le~p-~~~~~~I~~~ 389 (709)
.+.+ ++++++.+++++|++..|.. +++.+.|.+|
T Consensus 235 ~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~w 271 (274)
T TIGR03100 235 RGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEW 271 (274)
T ss_pred HHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHH
Confidence 5544 78999999999999966654 8899999965
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=206.69 Aligned_cols=123 Identities=22% Similarity=0.246 Sum_probs=104.3
Q ss_pred CCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 436 ~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
.+++++|.||+|.++|+|+|+||+++ +|.+++... .++.+++++++.+|+.|+ ++++++.+|+|||+
T Consensus 427 ~~~~v~g~e~lp~~~~~i~~~nH~s~-~D~~~~~~~----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~v~ 493 (1146)
T PRK08633 427 YRLRVEGRENIPAKGGALLLGNHVSW-IDWALLQAA----SPRPIRFVMERSIYEKWY--------LKWFFKLFGVIPIS 493 (1146)
T ss_pred EEEEEECCcCCCCCCCEEEEECCCch-HHHHHHHHH----cCCCeEEEeeHHhhhChh--------HHHHHHHCCEEEec
Confidence 36689999999999999999999975 698777666 356688999999998743 88899999999999
Q ss_pred HH-------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchh
Q 005190 516 GI-------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDD 578 (709)
Q Consensus 516 ~~-------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~ 578 (709)
|+ .+.+.|++|.+|+|||||||+. ..++. +||+|++++|.++++|||||++.|...
T Consensus 494 r~~~~~~~~~~~~~l~~g~~~~ifPeGt~~~------~~~~~-~~~~g~~~~a~~~~~~i~pv~~~g~~~ 556 (1146)
T PRK08633 494 SGGSKESLEFIRKALDDGEVVCIFPEGAITR------NGQLN-EFKRGFELIVKGTDVPIIPFYIRGLWG 556 (1146)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEECCcCCCC------CCCcc-chhHHHHHHHHHCCCCEEEEEEecccc
Confidence 83 3557899999999999999852 23455 899999999999999999999988544
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=205.08 Aligned_cols=123 Identities=19% Similarity=0.130 Sum_probs=105.2
Q ss_pred CceeeccCCCCCCC-CeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 437 GKIVRGLSGIPSEG-PVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 437 ~~~~~g~e~ip~~~-p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
+++++|.||+|.++ |+|+|+||+++ +|.+++... .++++++++++.+++.|+ ++.+++.+|++|++
T Consensus 440 ~~~~~g~~~~~~~~~~~i~~~nH~s~-~D~~~l~~~----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~ 506 (1140)
T PRK06814 440 RVEVKGLENLQKAGKKAVIAANHVSF-LDGPLLAAY----LPEEPTFAIDTDIAKAWW--------VKPFLKLAKALPVD 506 (1140)
T ss_pred EEEEeCCccccccCCCEEEEECCcch-HHHHHHHHh----CCCCeEEEEeHHHhhhhH--------HHHHHHhcCeeecC
Confidence 67899999999865 69999999976 799888877 455689999999998743 88899999999999
Q ss_pred HHH------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhh
Q 005190 516 GIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 579 (709)
Q Consensus 516 ~~~------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~ 579 (709)
|++ +.+.|++|.+|+|||||||+ ...++. |||+|++++|.++++||+||++.|..+.
T Consensus 507 r~~~~~~~~~~~~l~~g~~~~ifPeGtr~------~~~~~~-~f~~g~~~~a~~~~~~i~pv~i~g~~~~ 569 (1140)
T PRK06814 507 PTNPMATRTLIKEVQKGEKLVIFPEGRIT------VTGSLM-KIYDGPGMIADKAGAMVVPVRIDGLQFT 569 (1140)
T ss_pred CCChHHHHHHHHHHHCCCEEEEeCCCCCC------CCCCcc-ccchHHHHHHHHCCCCEEEEEEcCcccc
Confidence 854 56789999999999999984 233455 9999999999999999999999886553
|
|
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.6e-18 Score=152.30 Aligned_cols=117 Identities=22% Similarity=0.277 Sum_probs=98.8
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG 516 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~ 516 (709)
+++++|.||+|.++|+|+++||++. +|..++...+ ++.+++++++.+++.|+ +++++..+|+++++|
T Consensus 3 ~~~v~g~~~lp~~~~~i~v~nH~s~-~D~~~~~~~~----~~~~~~~~~~~~~~~p~--------~~~~~~~~g~~~i~r 69 (130)
T TIGR00530 3 KVEVVGPENLPAKSPVLVVANHQSN-LDPLTLSAAF----PPPIVFIAKKELKWIPF--------FGIMLWLTGAIFIDR 69 (130)
T ss_pred EEEEECcccCCCCCCEEEEECCCch-hHHHHHHHHc----CCCcEEEEhHHhhhCCH--------HHHHHHHcCCEEecC
Confidence 5789999999999999999999965 7997766653 45688999998888743 788999999999987
Q ss_pred HH----------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeee
Q 005190 517 IN----------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 573 (709)
Q Consensus 517 ~~----------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~ 573 (709)
.+ +.++|++|.+|+|||||+++. ... .++|++|++++|.++|+|||||++
T Consensus 70 ~~~~~~~~~~~~~~~~l~~g~~v~ifPeG~~~~------~~~-~~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 70 ENIRAIATALKAAIEVLKQGRSIGVFPEGTRSR------GRD-ILPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred CChHHHHHHHHHHHHHHhCCCEEEEeCCCCCCC------CCC-CCCcchhHHHHHHHcCCCEEeEEe
Confidence 43 677899999999999999741 123 349999999999999999999987
|
1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase. |
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=160.10 Aligned_cols=165 Identities=21% Similarity=0.274 Sum_probs=114.9
Q ss_pred CCceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcC
Q 005190 436 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGA 511 (709)
Q Consensus 436 ~~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~ 511 (709)
.++++.|.|+++ .++|+|+++||++. +|..++.. .+..+.+++.+..+ .+ .++.+++.+|+
T Consensus 8 ~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~-l~~~~~~~-----~~~~~~~v~~~~~~-~~--------~~~~~~~~~g~ 72 (189)
T cd07983 8 LRWRVIGDESADALIAQGEPVILAFWHGRL-LLMPYLFR-----RRKRIAALISRSKD-GE--------IIARVLERLGI 72 (189)
T ss_pred EeEEEeCchhhhhhccCCCCEEEEEeCchH-HHhHHHhc-----cCCCeEEEEecCcC-HH--------HHHHHHHHhCC
Confidence 477899999998 57899999999863 56544322 24566677766432 32 26778899999
Q ss_pred ccccH----------HHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhh
Q 005190 512 VPVSG----------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQ 581 (709)
Q Consensus 512 i~v~~----------~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~ 581 (709)
+++++ ..+.+.|++|.+|+|||||+|... . ++++|+++||.++|+||||+++.|....
T Consensus 73 ~~i~r~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~r~~~---------~-~~~~G~~~lA~~~~~pIvPv~i~~~~~~-- 140 (189)
T cd07983 73 RVVRGSSSRGGAAALREMLRALKDGYNIAITPDGPRGPR---------Y-KVKPGVILLARKSGAPIVPVAIAASRAW-- 140 (189)
T ss_pred CEEEcCCCCcHHHHHHHHHHHHhCCCEEEEcCCCCCCcc---------e-ecchHHHHHHHHhCCCEEEEEEEEEccE--
Confidence 99964 235678899999999999987321 1 6899999999999999999999875431
Q ss_pred hhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccC-ccCCCCCceEEEEecCccccCCcccccCCHHHHHH
Q 005190 582 IVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-YPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 660 (709)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~ 660 (709)
.... +. -.+|...+++.+.||+||+++.. .+.++.++
T Consensus 141 -~~~~-------------------------------------~~~~~~p~~~~~~~v~~~~pi~~~~~----~~~~~~~~ 178 (189)
T cd07983 141 -RLKS-------------------------------------WDRFIIPKPFSRVVIVFGEPIHVPPD----ADEEELEE 178 (189)
T ss_pred -eccC-------------------------------------ccccccCCCCcceEEEEeCCEeeCCC----CCHHHHHH
Confidence 0000 00 01333346799999999998732 13555666
Q ss_pred HHHHHHHHH
Q 005190 661 LYLEIKSEV 669 (709)
Q Consensus 661 ~~~~v~~~i 669 (709)
+.+++.+.|
T Consensus 179 ~~~~~~~~~ 187 (189)
T cd07983 179 YRLELEAAL 187 (189)
T ss_pred HHHHHHHHh
Confidence 665555544
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-16 Score=170.16 Aligned_cols=207 Identities=15% Similarity=0.095 Sum_probs=132.2
Q ss_pred CCCEEEEeCCCCCCc-ccHHHHHHHh-cCCceEEEEeCCCCCCCC-H---HHHHHHHHHHHHHhhccC--CCCCEEEEEe
Q 005190 131 DSPLLLFLPGIDGVG-LGLIRQHQRL-GKIFDIWCLHIPVKDRTS-F---TGLVKLVESTVRSESNRS--PKRPVYLVGE 202 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss-~---~~~~~dl~~~l~~~~~~~--~~~~v~LvGh 202 (709)
..|+||++||+++.. ..|..++..| ..||.|+++|+||||.|. . .+.......+++.+.... +..++.++||
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 467788878877764 5677788888 578999999999999982 1 233333345555544432 4578999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCch
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (709)
||||.+|+.+|..+|++++++|++++........ ......++......+.. ..+.. ...
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~----~~~~~~~p~~~~~~la~----~lg~~----------~~~--- 331 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD----PKRQQQVPEMYLDVLAS----RLGMH----------DAS--- 331 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCccchhhcc----hhhhhhchHHHHHHHHH----HhCCC----------CCC---
Confidence 9999999999999999999999998864311000 00111111100000000 00000 000
Q ss_pred HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhc-ccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC
Q 005190 283 TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRL-HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361 (709)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~ 361 (709)
...+.. . +..........+ .++++|+|+|+|++|.++|.+. ++.+.+..++
T Consensus 332 -~~~l~~-----------------------~---l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~-a~~l~~~~~~ 383 (414)
T PRK05077 332 -DEALRV-----------------------E---LNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEED-SRLIASSSAD 383 (414)
T ss_pred -hHHHHH-----------------------H---hhhccchhhhhhccCCCCcEEEEecCCCCCCCHHH-HHHHHHhCCC
Confidence 000000 0 000000000111 5689999999999999999997 8888999999
Q ss_pred cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 362 CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++++++++ ++.+.++++.+.+.+|
T Consensus 384 ~~l~~i~~~---~~~e~~~~~~~~i~~w 408 (414)
T PRK05077 384 GKLLEIPFK---PVYRNFDKALQEISDW 408 (414)
T ss_pred CeEEEccCC---CccCCHHHHHHHHHHH
Confidence 999999986 5667999999999866
|
|
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.5e-17 Score=157.67 Aligned_cols=163 Identities=24% Similarity=0.290 Sum_probs=122.5
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG 516 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~ 516 (709)
+++++|.||+|.++|+|+++||++. +|..++...+....+..+.+++.+..+. +..+++..|+++++|
T Consensus 13 ~~~~~g~~~~p~~~~~i~v~nH~s~-~D~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~~~~~~~g~~~i~r 80 (187)
T cd06551 13 RLEVKGPPPPPGGGPVLFVSNHSSW-WDGLILFLLLERGLRRDVYGLMDEELLE-----------RYPFFTRLGAFSVDR 80 (187)
T ss_pred EEEEeccccCCCCCCEEEEEcchhh-HHHHHHHHHHHhccCCCeEEEEcHhhhh-----------hChHHhhcCeEEecC
Confidence 6789999999999999999999965 6887777765433346778888877762 122466669999875
Q ss_pred ----------HHHHHHhcC-CCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcC
Q 005190 517 ----------INLYKLMSS-KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLD 585 (709)
Q Consensus 517 ----------~~~~~~L~~-g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~ 585 (709)
+.+.++|++ |..|+|||||+++... ..+. ++++|++++|.++++||||+++.+.++.+
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~-----~~~~-~~~~g~~~la~~~~~~IvPv~i~~~~~~~----- 149 (187)
T cd06551 81 DSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRD-----KRPL-QFKPGVAHLAEKAGVPIVPVALRYTFELF----- 149 (187)
T ss_pred CChhhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCC-----CCcc-cccchHHHHHHHcCCcEEEEEEecccccc-----
Confidence 236678899 9999999999974221 2334 78999999999999999999998754431
Q ss_pred ccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHH
Q 005190 586 YNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEI 665 (709)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v 665 (709)
....++++.+|+||.++.. ...+++.+++
T Consensus 150 --------------------------------------------~~~~~~~i~~~~pi~~~~~-------~~~~~~~~~~ 178 (187)
T cd06551 150 --------------------------------------------EQFPEIFVRIGPPIPYAET-------ALGEELAAEL 178 (187)
T ss_pred --------------------------------------------CCCCcEEEEECCCcccccc-------ccHHHHHHHH
Confidence 1146899999999999843 2356666666
Q ss_pred HHHHHHHH
Q 005190 666 KSEVEKCL 673 (709)
Q Consensus 666 ~~~i~~~~ 673 (709)
.+.|++++
T Consensus 179 ~~~~~~~~ 186 (187)
T cd06551 179 ANRLTRLL 186 (187)
T ss_pred HHHHHHhc
Confidence 66666654
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=170.18 Aligned_cols=263 Identities=16% Similarity=0.132 Sum_probs=157.5
Q ss_pred CCCEEEEeCCCCCCcccHH-----HHHHHh-cCCceEEEEeCCCCCCC----CHHHHHH-HHHHHHHHhhccCCCCCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLI-----RQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVK-LVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~-----~~~~~L-~~~~~Vi~~Dl~G~G~S----s~~~~~~-dl~~~l~~~~~~~~~~~v~L 199 (709)
..++||++||+......|. .++..| .+||+|+++|++|+|.+ ++++++. ++.+.++.+....+.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 4567999999988777775 688888 58999999999999988 5677775 48888888877778889999
Q ss_pred EEechhHHHHH----HHHHhC-CCceeEEEEecCCCCcchhhhhhhhHHHhhc-hhhhHH-----------hHHHhhhhh
Q 005190 200 VGESLGACIAL----AVAARN-PDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQITT-----------MLSSTLSLM 262 (709)
Q Consensus 200 vGhS~GG~iAl----~~A~~~-P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~ 262 (709)
+||||||.++. .+++.+ ++++++++++++...+..... +..+.... ...+.. .+...+..+
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~--l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~l 344 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGE--LGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLL 344 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcch--hhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhc
Confidence 99999999862 245555 788999999988776654321 11111000 000000 000111111
Q ss_pred cCchh--hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhh---------HhhhhcccC
Q 005190 263 TGDPL--KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASA---------YANSRLHAV 331 (709)
Q Consensus 263 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~i 331 (709)
..+.. ............... ..-++.. .-...++.......+..+-.... .....+.+|
T Consensus 345 rp~~l~w~~~v~~yl~g~~~~~-fdll~Wn---------~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I 414 (532)
T TIGR01838 345 RENDLIWNYYVDNYLKGKSPVP-FDLLFWN---------SDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKV 414 (532)
T ss_pred ChhhHHHHHHHHHHhcCCCccc-hhHHHHh---------ccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhC
Confidence 10000 000000000000000 0000000 00011233333333322211110 112467889
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhcccccccCCCCCCcccCCCChHh
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSE 411 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~~~~~~v~d~~~p~~~e 411 (709)
++|+++|+|++|.++|.+. +..+.+.+++.+..+++++||.+++++|..= .|++=++.+-.+.+.++
T Consensus 415 ~vPvLvV~G~~D~IvP~~s-a~~l~~~i~~~~~~vL~~sGHi~~ienPp~~------------~k~~y~~~~~~~~~~~~ 481 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQS-AYRGAALLGGPKTFVLGESGHIAGVVNPPSK------------NKYGHWTNAALPADPEV 481 (532)
T ss_pred CCCEEEEeeCCCCcCCHHH-HHHHHHHCCCCEEEEECCCCCchHhhCCCCC------------CCCceeeCCCCCCCHHH
Confidence 9999999999999999996 8889999999999999999999999988531 22222344445556666
Q ss_pred HHHHhhh
Q 005190 412 FNKICED 418 (709)
Q Consensus 412 ~~~~~~~ 418 (709)
+....++
T Consensus 482 w~~~a~~ 488 (532)
T TIGR01838 482 WLAGATE 488 (532)
T ss_pred HHhcCCc
Confidence 6554444
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-16 Score=164.69 Aligned_cols=245 Identities=16% Similarity=0.209 Sum_probs=143.5
Q ss_pred CCEEEEeCCCCCCcccH-----HHHHHHh-cCCceEEEEeCCCCCCC----CHHHHHH-HHHHHHHHhhccCCCCCEEEE
Q 005190 132 SPLLLFLPGIDGVGLGL-----IRQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVK-LVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~-----~~~~~~L-~~~~~Vi~~Dl~G~G~S----s~~~~~~-dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+++||++||+..+...+ ..+++.| .+||+|+++|++|+|.| +++++.. ++.++++.+....+.++++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lv 141 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLL 141 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 44699999986555444 5688888 47899999999999987 6778875 488888888887878899999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHh------------hchhhhHHhHHHhhhhhcCchhh
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE------------LIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
||||||.+++.+++.+|+.++++|++++...+..... ....+.. .++..... ..+..+ .+..
T Consensus 142 GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~f~~l--~p~~ 215 (350)
T TIGR01836 142 GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGN-MLSNWARHVDIDLAVDTMGNIPGELLN---LTFLML--KPFS 215 (350)
T ss_pred EECHHHHHHHHHHHhCchheeeEEEeccccccCCCCc-hhhhhccccCHHHHHHhcCCCCHHHHH---HHHHhc--Ccch
Confidence 9999999999999999999999999998765433211 0000000 01110000 000000 0000
Q ss_pred hH---HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhH---------hhhhcccCCccEE
Q 005190 269 MA---MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAY---------ANSRLHAVKAQML 336 (709)
Q Consensus 269 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~i~~PvL 336 (709)
.. ...........+....... ... ..... ...+...+......+...... ....+.++++|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~---w~~d~-~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvl 290 (350)
T TIGR01836 216 LGYQKYVNLVDILEDERKVENFLR-MEK---WIFDS-PDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPIL 290 (350)
T ss_pred hhhHHHHHHHHhcCChHHHHHHHH-HHH---HhcCC-cCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeE
Confidence 00 0000000011111111110 000 00000 001111111111111100000 0124678899999
Q ss_pred EEeeCCCCCCCcHHHHHHHHhhcCC--cEEEEEcCCCccccccCh---hhHHHHHhhc
Q 005190 337 VLCSGKDQLMPSQEEGERLSSALHK--CEPRNFYGHGHFLLLEDG---VDLVTIIKGA 389 (709)
Q Consensus 337 vi~G~~D~~v~~~~~~~~l~~~~~~--~~~~~i~~aGH~~~le~p---~~~~~~I~~~ 389 (709)
+++|++|.+++++. ++.+.+.+++ .++++++ +||..++..+ +++...|.+|
T Consensus 291 iv~G~~D~i~~~~~-~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~w 346 (350)
T TIGR01836 291 NIYAERDHLVPPDA-SKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKW 346 (350)
T ss_pred EEecCCCCcCCHHH-HHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHH
Confidence 99999999999997 8888887764 5666676 6999987755 6677777755
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-18 Score=157.09 Aligned_cols=120 Identities=22% Similarity=0.330 Sum_probs=71.3
Q ss_pred ceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH-
Q 005190 438 KIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG- 516 (709)
Q Consensus 438 ~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~- 516 (709)
++|+|.||+|.++|+|+++||+++ +|.+++...+.+..+..+++++...+++.|+ ++.+++.+|.++++|
T Consensus 2 v~v~g~e~l~~~~~~i~v~NH~s~-~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~i~i~r~ 72 (132)
T PF01553_consen 2 VEVEGLENLPKGGGVIFVSNHQSW-LDGFALMALLQRSGPRRPRFVAKDELFKIPF--------LGWFLRRLGFIPIDRS 72 (132)
T ss_dssp ----HHHHHHTT-EEEEEE----T-THHHHHHHHHTTT-HHH-EEEEECHHHH-TT--------THHHHHEEEEE--CCH
T ss_pred CccCccccCCCCCCEEEEecCCCC-CcchheeehhhhhccccceeEeeeccccchh--------hhhhhhhccceeeeee
Confidence 579999999999999999999977 7998888887544456799999999987643 788999999999999
Q ss_pred ---------HHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeee
Q 005190 517 ---------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 573 (709)
Q Consensus 517 ---------~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~ 573 (709)
+.+.+.|++|..|+|||||++. ..+++ .++++|++++|.+++++||||++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~i~ifPEG~~~------~~~~~-~~~~~G~~~~a~~~~~~ivPv~i 131 (132)
T PF01553_consen 73 NRKKNRKALKDIKEILRKGGSIVIFPEGTRS------RSGEL-LPFKKGAFHIALKAKVPIVPVAI 131 (132)
T ss_dssp HHHHHHHHHHHHHHHHHC---EEE-TT-S---------B--B-----HHHHHHHHHH---------
T ss_pred cccccchhHHHHHHHhhhcceeeecCCccCc------CCCcc-CCccHHHHHHHHHcCCccccccC
Confidence 3356688999999999999873 23444 49999999999999999999987
|
This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-16 Score=150.79 Aligned_cols=181 Identities=19% Similarity=0.148 Sum_probs=119.1
Q ss_pred CEEEEeCCCCCCcccHHH--HHHHhc---CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 133 PLLLFLPGIDGVGLGLIR--QHQRLG---KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~--~~~~L~---~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
|+|||+||++++...|.. +.+.++ .+|+|+++|+|||| +++++++.+++++ .+.++++++||||||.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----~~~~~~l~~l~~~----~~~~~~~lvG~S~Gg~ 73 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----ADAAELLESLVLE----HGGDPLGLVGSSLGGY 73 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----HHHHHHHHHHHHH----cCCCCeEEEEECHHHH
Confidence 579999999999999884 345554 37999999999986 5677777777776 5567899999999999
Q ss_pred HHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHH
Q 005190 208 IALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL 287 (709)
Q Consensus 208 iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (709)
+++.+|.++|. .+|+++|+... ......+...... ...... ...-...
T Consensus 74 ~a~~~a~~~~~---~~vl~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~--------------~~~~~~~ 121 (190)
T PRK11071 74 YATWLSQCFML---PAVVVNPAVRP----FELLTDYLGENEN-----------PYTGQQ--------------YVLESRH 121 (190)
T ss_pred HHHHHHHHcCC---CEEEECCCCCH----HHHHHHhcCCccc-----------ccCCCc--------------EEEcHHH
Confidence 99999999983 36888885441 1000000000000 000000 0000011
Q ss_pred HHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEE
Q 005190 288 SQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 367 (709)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i 367 (709)
..+... . .. ..+. ..+|+++|+|++|.++|.+. +.++.+ +++.+++
T Consensus 122 ~~d~~~--------------------------~--~~-~~i~-~~~~v~iihg~~De~V~~~~-a~~~~~---~~~~~~~ 167 (190)
T PRK11071 122 IYDLKV--------------------------M--QI-DPLE-SPDLIWLLQQTGDEVLDYRQ-AVAYYA---ACRQTVE 167 (190)
T ss_pred HHHHHh--------------------------c--CC-ccCC-ChhhEEEEEeCCCCcCCHHH-HHHHHH---hcceEEE
Confidence 111000 0 00 1223 67889999999999999997 888777 5678889
Q ss_pred cCCCccccccChhhHHHHHhhc
Q 005190 368 YGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 368 ~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|++|.. ...++..+.+.+|
T Consensus 168 ~ggdH~f--~~~~~~~~~i~~f 187 (190)
T PRK11071 168 EGGNHAF--VGFERYFNQIVDF 187 (190)
T ss_pred CCCCcch--hhHHHhHHHHHHH
Confidence 9999988 3446677766643
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=154.10 Aligned_cols=97 Identities=18% Similarity=0.209 Sum_probs=76.0
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHH-------HHHHHHHHHHHHhhccC--C
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFT-------GLVKLVESTVRSESNRS--P 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~-------~~~~dl~~~l~~~~~~~--~ 193 (709)
..|+||++||++++...|..++..|+ +||.|+++|+||||.+ ++. +..+|+.++++.+.... .
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLL 105 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 46899999999999989999999995 6899999999999875 111 22456666666665542 3
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVN 227 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~ 227 (709)
.++++++|||+||.+++.++.++|+...++++++
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred ccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 5789999999999999999999988655555544
|
|
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.5e-17 Score=158.61 Aligned_cols=112 Identities=19% Similarity=0.193 Sum_probs=89.2
Q ss_pred CCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHHH--------
Q 005190 447 PSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN-------- 518 (709)
Q Consensus 447 p~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~~-------- 518 (709)
+.++|+|+|+||+++ +|.+++...+.. .+...++++....+..+ .++++++.+|+++|+|++
T Consensus 19 ~~~~~~i~v~NH~S~-lD~~~l~~~~~~-~~~~~~~va~~e~~~~~--------~~g~~l~~~g~i~I~R~~~~~~~~~~ 88 (205)
T cd07993 19 QEGHPVVLLPTHRSY-LDFLLLSFILFS-LGLPLPHIAAGENLNIP--------ILGTLLRRLGAFFIRRSFGKDPLYRA 88 (205)
T ss_pred hcCCCEEEEecCcch-hHHHHHHHHHHH-CCCCCcEEEEchhhCcH--------HHHHHHHHCCCEEEecCCCccHHHHH
Confidence 444899999999975 799887766543 45566777777777653 378899999999998842
Q ss_pred -----HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHc-------CCcEEEeeeec
Q 005190 519 -----LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVPFGAVG 575 (709)
Q Consensus 519 -----~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~-------~~pIvPv~~~G 575 (709)
+.++|++|.+|+|||||||+ ...++. ++|+|++++|.++ ++|||||++..
T Consensus 89 ~~~~~~~~~l~~g~~l~iFPEGtrs------~~g~~~-~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y 150 (205)
T cd07993 89 VLQEYVQELLKNGQPLEFFIEGTRS------RTGKLL-PPKLGLLSVVVEAYLKGSVPDVLIVPVSISY 150 (205)
T ss_pred HHHHHHHHHHhCCceEEEEcCCCCC------CCCCcc-chHHHHHHHHHHHHhhCCCCCeEEEEeEEee
Confidence 34678999999999999984 223455 8999999999998 89999999953
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=162.45 Aligned_cols=244 Identities=14% Similarity=0.175 Sum_probs=140.5
Q ss_pred CCCEEEEeCCCCCCcccHH------HHHHHhc-CCceEEEEeCCCCCCC----------------CHHHHH-HHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLI------RQHQRLG-KIFDIWCLHIPVKDRT----------------SFTGLV-KLVESTVR 186 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~------~~~~~L~-~~~~Vi~~Dl~G~G~S----------------s~~~~~-~dl~~~l~ 186 (709)
++|+|||+||+.+++..|. .++..|+ +||+||++|+||++.| ++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 3678999999999888874 2444564 6999999999998743 467787 79999999
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhH-----------
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQIT----------- 252 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 252 (709)
++.... .++++++||||||.+++.++ .+|+ .|+.+++++|..........-...+.......+.
T Consensus 153 ~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 153 YVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 986544 47899999999999998554 6776 5778888888654322110000000000000000
Q ss_pred -HhHHHhhhhhcCchhhh-H-HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcC----ChhhHHHHHHHHHHhh----
Q 005190 253 -TMLSSTLSLMTGDPLKM-A-MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADIL----PKETLLWKIELLKAAS---- 321 (709)
Q Consensus 253 -~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---- 321 (709)
..+..+...+....... . ...+.. ... ..-. ...+.+.... +-..+.++.++.++..
T Consensus 231 ~~~~~~~~~~~C~~~~~c~~~~~~~~g-~~~-~~n~----------~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~y 298 (395)
T PLN02872 231 SDVLVKLLDSICEGHMDCNDLLTSITG-TNC-CFNA----------SRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHY 298 (395)
T ss_pred cHHHHHHHHHHccCchhHHHHHHHHhC-CCc-ccch----------hhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccC
Confidence 00000000000000000 0 000000 000 0000 0000111111 1112222222222110
Q ss_pred --------------hHhhhhcccC--CccEEEEeeCCCCCCCcHHHHHHHHhhcCC-cEEEEEcCCCcc---ccccChhh
Q 005190 322 --------------AYANSRLHAV--KAQMLVLCSGKDQLMPSQEEGERLSSALHK-CEPRNFYGHGHF---LLLEDGVD 381 (709)
Q Consensus 322 --------------~~~~~~l~~i--~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~-~~~~~i~~aGH~---~~le~p~~ 381 (709)
....-.+.++ ++|+++++|++|.+++++. ++.+.+.+++ .+++.++++||. ...|.|++
T Consensus 299 Dyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~d-v~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~ 377 (395)
T PLN02872 299 DYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTD-VEHTLAELPSKPELLYLENYGHIDFLLSTSAKED 377 (395)
T ss_pred CCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHH-HHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHH
Confidence 0011256677 5899999999999999997 8888888887 688899999996 44588999
Q ss_pred HHHHHhhc
Q 005190 382 LVTIIKGA 389 (709)
Q Consensus 382 ~~~~I~~~ 389 (709)
+.+.|.++
T Consensus 378 V~~~Il~f 385 (395)
T PLN02872 378 VYNHMIQF 385 (395)
T ss_pred HHHHHHHH
Confidence 99998854
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-15 Score=137.28 Aligned_cols=142 Identities=24% Similarity=0.360 Sum_probs=111.1
Q ss_pred EEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhc-cCCCCCEEEEEechhHHHHHH
Q 005190 134 LLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN-RSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~-~~~~~~v~LvGhS~GG~iAl~ 211 (709)
+||++||++++...|..+++.| +++|.|+.+|+|++|.+...+ ++.++++.+.. .....+++++|||+||.+++.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~ 77 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD---AVERVLADIRAGYPDPDRIILIGHSMGGAIAAN 77 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH---HHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH---HHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHH
Confidence 5999999999999999999999 478999999999999983333 33333333211 135689999999999999999
Q ss_pred HHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhH
Q 005190 212 VAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291 (709)
Q Consensus 212 ~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (709)
++.+. ..++++|++++. +.
T Consensus 78 ~~~~~-~~v~~~v~~~~~------------------~~------------------------------------------ 96 (145)
T PF12695_consen 78 LAARN-PRVKAVVLLSPY------------------PD------------------------------------------ 96 (145)
T ss_dssp HHHHS-TTESEEEEESES------------------SG------------------------------------------
T ss_pred Hhhhc-cceeEEEEecCc------------------cc------------------------------------------
Confidence 99998 789999999881 00
Q ss_pred HHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-CcEEEEEcCC
Q 005190 292 VALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGH 370 (709)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~a 370 (709)
.+.+...++|+++++|++|.+++.+. .+.+.+.++ +.++++++++
T Consensus 97 ---------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~i~g~ 142 (145)
T PF12695_consen 97 ---------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQ-VRRLYEALPGPKELYIIPGA 142 (145)
T ss_dssp ---------------------------------CHHHTTTTSEEEEEEETT-SSSHHHH-HHHHHHHHCSSEEEEEETTS
T ss_pred ---------------------------------hhhhhccCCcEEEEEECCCCcCCHHH-HHHHHHHcCCCcEEEEeCCC
Confidence 01124456799999999999999986 888777666 6899999999
Q ss_pred Ccc
Q 005190 371 GHF 373 (709)
Q Consensus 371 GH~ 373 (709)
+|+
T Consensus 143 ~H~ 145 (145)
T PF12695_consen 143 GHF 145 (145)
T ss_dssp -TT
T ss_pred cCc
Confidence 996
|
... |
| >KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.3e-17 Score=141.17 Aligned_cols=180 Identities=23% Similarity=0.385 Sum_probs=143.9
Q ss_pred ccCCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcc
Q 005190 434 LANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 513 (709)
Q Consensus 434 ~~~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~ 513 (709)
.++|++|.|+||+|.+||.++|-+|...++|..-+-..+..+..+.++.+.+..+|+. |. |+.+-..+..-|
T Consensus 28 iyhgyeviglenvpqegpalivyyhgaipidmyylnsrmllqrerliytigdrflfkl------pg--wgtiseafhvsp 99 (279)
T KOG4321|consen 28 IYHGYEVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKL------PG--WGTISEAFHVSP 99 (279)
T ss_pred hccceeEeecccCCCcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeC------CC--ccchhhhhccCC
Confidence 3579999999999999999999999988889988888888778899999999999965 43 555777888888
Q ss_pred ccHHHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccccccCc
Q 005190 514 VSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIP 593 (709)
Q Consensus 514 v~~~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~ 593 (709)
.+-.+|...|+.|..+.|-|+|.-|+..+ +.-|+++|..+-||++.|+++++||+|++..+..+-|..+ .
T Consensus 100 gtvqscvsilrdgnllaispggvyeaqfg-dhyyellwrnrvgfakvaieakapiipcftqnlregfrqv---------g 169 (279)
T KOG4321|consen 100 GTVQSCVSILRDGNLLAISPGGVYEAQFG-DHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREGFRQV---------G 169 (279)
T ss_pred ccHHHHHHhhccCcEEEEcCCceeeeccc-hHHHHHHHhccccceeeeeecCCCccchhHHHHHHHHHHh---------h
Confidence 88899999999999999999999988764 4568999999999999999999999999986655543333 2
Q ss_pred cchHHHHHHHhhhhhccccccccccCcccccC--ccCCCCCceEEEEecCccccCC
Q 005190 594 YFKSQIEELTVTAARLRTDTKGEVANQDMHMP--YPVPKVPGRFYFYFGKPIETKG 647 (709)
Q Consensus 594 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p--~~~p~~~~~~~~~~G~pI~~~~ 647 (709)
.|+..+.++.. +.| .| -..-.+|.++..+.|+||+.+.
T Consensus 170 ifrtffmrlyn---kvr-------------ipvypiyggfpvkfrtylgkpipyde 209 (279)
T KOG4321|consen 170 IFRTFFMRLYN---KVR-------------IPVYPIYGGFPVKFRTYLGKPIPYDE 209 (279)
T ss_pred HHHHHHHHHhh---ccc-------------ceeeeccCCcceeehhhcCCCCCCCC
Confidence 34445544432 233 33 1111257788999999999874
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=146.61 Aligned_cols=249 Identities=20% Similarity=0.240 Sum_probs=141.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC---CceEEEEeCCCCCCCC-----HHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPVKDRTS-----FTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~Dl~G~G~Ss-----~~~~~~dl~~~l~~~~~ 190 (709)
.+.|...+.. .|+++++||++++...|......+.. .|+++++|+||||.|+ ...+++++..+++.
T Consensus 11 ~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~--- 84 (282)
T COG0596 11 RLAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDA--- 84 (282)
T ss_pred EEEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHH---
Confidence 4445555442 55899999999999999884444421 2999999999999984 34556777777776
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhh--------hhHHHhhchhhhHHhHHHhhhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS--------TIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
.+..+++++||||||.+++.++.++|+.+.++|++++........... .......................
T Consensus 85 -~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
T COG0596 85 -LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAAL 163 (282)
T ss_pred -hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcc
Confidence 555569999999999999999999999999999999765411100000 00000000000000000000000
Q ss_pred c-CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeC
Q 005190 263 T-GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG 341 (709)
Q Consensus 263 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~ 341 (709)
. ........... .................. . .............. .......+..+.+|+++++|+
T Consensus 164 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 164 GLLAALAAAARAG-LAEALRAPLLGAAAAAFA------R----AARADLAAALLALL--DRDLRAALARITVPTLIIHGE 230 (282)
T ss_pred cccccccccchhc-cccccccccchhHhhhhh------h----hcccccchhhhccc--ccccchhhccCCCCeEEEecC
Confidence 0 00000000000 000000000000000000 0 00000000000000 001223457778999999999
Q ss_pred CCCCCCcHHHHHHHHhhcCC-cEEEEEcCCCccccccChhhHHHHHhh
Q 005190 342 KDQLMPSQEEGERLSSALHK-CEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 342 ~D~~v~~~~~~~~l~~~~~~-~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
+|.+.+... ...+.+..++ +++.+++++||++++++|+.+++.+.+
T Consensus 231 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAEL-ARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHHH-HHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 997777664 6677777775 999999999999999999999888874
|
|
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=148.90 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=99.9
Q ss_pred CCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 436 ~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
-+++|+|.|++|.++|+|+|+||+++ +|.+++...+.+.. ..++++++..+++.|+ ++..+..+|.++++
T Consensus 73 ~k~~V~G~e~l~~~~~~IiisNHqS~-~D~l~l~~~~~~~~-~~~kfv~K~eL~~iP~--------~G~~~~~~~~ifi~ 142 (301)
T PRK14014 73 TQWDVEGLEGLSKKGWYLVISNHQSW-VDILVLQYVFNRRI-PMLKFFLKQELIWVPF--------LGLAWWALDFPFMK 142 (301)
T ss_pred cEEEEEcCCCCCCCCCEEEEECCCcH-HHHHHHHHHHhhcc-CceEEEehHHhhhccc--------HHHHHHHcCCeEEe
Confidence 46789999999999999999999976 69988777665422 2478999999997744 77789999999998
Q ss_pred HHHH---------------------HHHhcCCCeEEEecCchhhhhcc---CCccceeccCCChhHHHHHHHcC----Cc
Q 005190 516 GINL---------------------YKLMSSKSHVLLYPGGVREALHR---KGEEYKLFWPESSEFVRMATTFG----AK 567 (709)
Q Consensus 516 ~~~~---------------------~~~L~~g~~v~ifPeG~r~~~~~---~~~~~~l~~~~k~G~~~lA~~~~----~p 567 (709)
|.+. .+..+.|.+++|||||||..... ....++-..++|+|.+.+|+++. .+
T Consensus 143 R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~~ 222 (301)
T PRK14014 143 RYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFDG 222 (301)
T ss_pred ccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCCE
Confidence 8421 11223578999999999953221 11233223489999999999996 78
Q ss_pred EEEeeeecch
Q 005190 568 IVPFGAVGED 577 (709)
Q Consensus 568 IvPv~~~G~~ 577 (709)
|+||.+.+.+
T Consensus 223 I~dvti~y~~ 232 (301)
T PRK14014 223 LLDVTIVYPD 232 (301)
T ss_pred EEEEEEEeCC
Confidence 9999998654
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-15 Score=163.39 Aligned_cols=182 Identities=16% Similarity=0.156 Sum_probs=119.2
Q ss_pred ceeeeccCCceeeccCCCCC---CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHH
Q 005190 429 VMLSTLANGKIVRGLSGIPS---EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDV 505 (709)
Q Consensus 429 ~~~~~~~~~~~~~g~e~ip~---~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~ 505 (709)
.++...+-+++|+|.||+|. ++|+|+||||+++ +|.+++...+ ++.+.+++.. +. .+.++
T Consensus 277 ~~~~~~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~-lD~~~l~~al----~~~~~~v~~~-~~-----------~l~~~ 339 (497)
T PLN02177 277 YNYKLLGIRLIVKGNPPPPPKKGQPGVLFVCNHRTV-LDPVVTAVAL----GRKISCVTYS-IS-----------KFSEL 339 (497)
T ss_pred HHHHHcCcEEEEEcCCCCCcccCCCCeEEEECCCCc-chHHHHHHHc----CCCeEEEeeh-HH-----------HHHHH
Confidence 34444555778999999995 3799999999976 6998777774 4446666621 11 15678
Q ss_pred HHHhcCccccHHH------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhh
Q 005190 506 MRIMGAVPVSGIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 579 (709)
Q Consensus 506 ~~~~g~i~v~~~~------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~ 579 (709)
+..+++++++|++ +.++|++| .++|||||||+ ....+. +|++||+.++ .|||||++.|..++
T Consensus 340 l~~i~~~~ldR~r~~~~~~~~~lL~~g-~lvIFPEGTrs------~~~~l~-~Fk~~fa~l~----~pIVPVAI~~~~~~ 407 (497)
T PLN02177 340 ISPIKAVALSREREKDAANIKRLLEEG-DLVICPEGTTC------REPFLL-RFSALFAELT----DRIVPVAINTKQSM 407 (497)
T ss_pred HHhcCEEEEeCCChHHHHHHHHHHhcC-CEEECcCcCCC------CCCCcc-hHHHHHHHHC----CcEEEEEEEccccc
Confidence 9999999999843 34678887 58899999984 233455 8899998877 59999999997766
Q ss_pred hhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHH
Q 005190 580 AQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAH 659 (709)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~ 659 (709)
+.. .......|+...+- +-....-+.|.|.+||+.+.. .. ..+...
T Consensus 408 f~~----~t~~~~~~~d~~~~---------------------------~~~p~~~y~V~fL~~l~~~~~--~~-~~~~~~ 453 (497)
T PLN02177 408 FHG----TTVRGYKLLDPYFV---------------------------FMNPRPTYEITFLNQLPKELT--CK-GGKSPI 453 (497)
T ss_pred ccc----cccccceecchhhh---------------------------hcCCCceEEEEECCCCChhhc--cc-CCCCHH
Confidence 432 21111211211111 001123479999999998841 00 123345
Q ss_pred HHHHHHHHHHHHHH
Q 005190 660 ELYLEIKSEVEKCL 673 (709)
Q Consensus 660 ~~~~~v~~~i~~~~ 673 (709)
++.++|++.|++.+
T Consensus 454 evAn~Vq~~i~~~l 467 (497)
T PLN02177 454 EVANYIQRVLAGTL 467 (497)
T ss_pred HHHHHHHHHHHHhh
Confidence 56677777776654
|
|
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-15 Score=157.35 Aligned_cols=174 Identities=10% Similarity=0.123 Sum_probs=108.7
Q ss_pred ceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHH
Q 005190 438 KIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI 517 (709)
Q Consensus 438 ~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~ 517 (709)
.+++|.|+.| ++|+|+|+||+++ +|.+++....+ ..++++...... + +..+.+++..|+|+++|+
T Consensus 152 i~v~G~e~~~-~~~~IiVaNH~S~-lDi~vL~s~~p------~~~v~kk~~~~~------~-~~~~~~~~~~g~I~VdR~ 216 (376)
T PLN02833 152 IKYHGPRPSR-RPKQVFVANHTSM-IDFIVLEQMTP------FAVIMQKHPGWV------G-FLQNTILESVGCIWFNRT 216 (376)
T ss_pred EEEECCcCCC-CCCEEEEECCCCh-HHHHHHHhhcC------ceEEEEehhhhh------H-HHHHHHHHHcCcEEecCC
Confidence 4788988777 4789999999976 79977766522 123333322211 1 113467899999999884
Q ss_pred H----------HHHHhc--CCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcC
Q 005190 518 N----------LYKLMS--SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLD 585 (709)
Q Consensus 518 ~----------~~~~L~--~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~ 585 (709)
+ +.+.++ +|.+|+|||||||+. ...+. +||+|++. .|+||+||++.+.........+
T Consensus 217 ~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~------~~~l~-~FK~Gaf~----~g~pI~PVaI~y~~~~~~~fW~ 285 (376)
T PLN02833 217 EAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVN------NEYTV-MFKKGAFE----LGCTVCPIAIKYNKIFVDAFWN 285 (376)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC------CCccc-ccchhhHh----cCCeEEEEEEEecCcccccccC
Confidence 3 122233 689999999999842 22345 89999764 5999999999754221100000
Q ss_pred ccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHH
Q 005190 586 YNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEI 665 (709)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~v 665 (709)
.. +..++..+++ ++...+..+.+.+++||+.+. .++.+++.+++
T Consensus 286 s~---~~s~~~~l~~--------------------------ll~~~~~~v~V~~LpPi~~~~-------~e~~~efA~rv 329 (376)
T PLN02833 286 SR---KQSFTMHLLR--------------------------LMTSWAVVCDVWYLEPQTLRP-------GETPIEFAERV 329 (376)
T ss_pred CC---CccHHHhHHH--------------------------HhCCCceEEEEEECCCcCCCC-------CCCHHHHHHHH
Confidence 00 0111111111 123346889999999998751 23567778888
Q ss_pred HHHHHHHH
Q 005190 666 KSEVEKCL 673 (709)
Q Consensus 666 ~~~i~~~~ 673 (709)
++.|.+.+
T Consensus 330 ~~~Ia~~l 337 (376)
T PLN02833 330 RDMIAKRA 337 (376)
T ss_pred HHHHHHhc
Confidence 88887765
|
|
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.9e-15 Score=167.54 Aligned_cols=121 Identities=18% Similarity=0.176 Sum_probs=93.5
Q ss_pred cCCceeeccCCCCC---CC-CeEEEeccccchhhHHhhHHHHHHHhcce-EeeeccccccccccCCCCCCCChHHHHHHh
Q 005190 435 ANGKIVRGLSGIPS---EG-PVLFVGYHNLLGLDVLTLIPEFMIESNIL-LRGLAHPMMYFKSKEGGLSDLSPYDVMRIM 509 (709)
Q Consensus 435 ~~~~~~~g~e~ip~---~~-p~i~v~NH~~~~~d~~~~~~~~~~~~~~~-~~~la~~~~~~~~~~~~~p~~~~~~~~~~~ 509 (709)
++|++|.|.|+||. ++ |+|+|+||+++ +|.+++...+.+ .+.. ++..+... ++. +.++++++.+
T Consensus 273 y~~v~V~g~E~l~~~~~~~~pvI~vpNHrS~-lD~llL~~~l~~-~~l~~p~iaag~n-L~~--------p~~g~llr~~ 341 (799)
T TIGR03703 273 YQGINVNNADRVRKLAQKGHEIIYVPCHRSH-MDYLLLSYVLYH-EGLVPPHIAAGIN-LNF--------WPAGPIFRRG 341 (799)
T ss_pred cCceEEechhhcccccCCCCcEEEEECCCCc-hHHHHHHHHHhh-cCCCCceEEechh-hcc--------HHHHHHHHHC
Confidence 45788999999985 55 99999999985 799888777664 3433 33333333 334 3378899999
Q ss_pred cCccccHHH-------------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHc-------CCcEE
Q 005190 510 GAVPVSGIN-------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIV 569 (709)
Q Consensus 510 g~i~v~~~~-------------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~-------~~pIv 569 (709)
|+++++|+. +..+|++|.+|+|||||||+ +..++. ++|.|++++|.+. +++||
T Consensus 342 GaffIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRS------rtGkll-~pK~G~l~~a~~a~~~~~~~~v~IV 414 (799)
T TIGR03703 342 GAFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRS------RTGRLL-PPKTGMLAMTLQAMLRGIRRPITLV 414 (799)
T ss_pred CceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcC------CCCCcc-chHHHHHHHHHHHhhccCCCCcEEE
Confidence 999999832 23578999999999999994 334566 9999999999987 89999
Q ss_pred Eeee
Q 005190 570 PFGA 573 (709)
Q Consensus 570 Pv~~ 573 (709)
||++
T Consensus 415 PVsI 418 (799)
T TIGR03703 415 PVYI 418 (799)
T ss_pred EEEE
Confidence 9988
|
Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. |
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.2e-15 Score=166.91 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=97.3
Q ss_pred ccCCceeeccCCCCC---C-CCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHh
Q 005190 434 LANGKIVRGLSGIPS---E-GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIM 509 (709)
Q Consensus 434 ~~~~~~~~g~e~ip~---~-~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~ 509 (709)
.++|++|.|.|+||. + .|+|+|+||++. +|.+++...+.+ .+..+..+|....|+.| .++++++.+
T Consensus 282 ly~~i~V~g~e~L~~~~~~~~~vI~v~NHrS~-lD~llL~~~l~~-~gl~~p~iAagenl~~p--------~lg~llr~~ 351 (818)
T PRK04974 282 LYQGINVHNAERVRQLAQDGHEIVYVPCHRSH-MDYLLLSYVLYH-QGLVPPHIAAGINLNFW--------PAGPIFRRG 351 (818)
T ss_pred HhCceEEcchhhhhhcccCCCCEEEEeCCCCc-hHHHHHHHHHhh-cCCCCceEEehHHhcch--------HHHHHHHHC
Confidence 345788999999994 4 499999999975 699877777653 45555666666667663 378899999
Q ss_pred cCccccHHH-------------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHc-------CCcEE
Q 005190 510 GAVPVSGIN-------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIV 569 (709)
Q Consensus 510 g~i~v~~~~-------------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~-------~~pIv 569 (709)
|+++|+|+. +..+|++|.+|+|||||||+ +..++. |+|.|.+.+|+++ +++||
T Consensus 352 GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRS------RtGkll-ppK~G~l~~a~~a~~~~~~~dv~IV 424 (818)
T PRK04974 352 GAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGGRS------RTGRLL-QPKTGMLAMTLQAMLRGSRRPITLV 424 (818)
T ss_pred CceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcC------CCCCCc-chhhhHHHHHHHHhhcccCCCcEEE
Confidence 999999842 23578899999999999994 334566 9999999999998 48999
Q ss_pred Eeee
Q 005190 570 PFGA 573 (709)
Q Consensus 570 Pv~~ 573 (709)
||++
T Consensus 425 PVsI 428 (818)
T PRK04974 425 PVYI 428 (818)
T ss_pred EEEE
Confidence 9988
|
|
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-14 Score=138.02 Aligned_cols=164 Identities=26% Similarity=0.345 Sum_probs=121.0
Q ss_pred cCCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccc
Q 005190 435 ANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514 (709)
Q Consensus 435 ~~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v 514 (709)
..+++++|.|+++.++|+|+++||... +|..++.... +....+++.+..++.++ +.++++.+|.+++
T Consensus 9 ~~~v~v~~~~~~~~~~~~i~~~nH~~~-~D~~~~~~~~----~~~~~~v~~~~~~~~~~--------~~~~~~~~g~~~v 75 (184)
T cd07989 9 GVRVRVEGLENLPPKGPVIIVANHQSY-LDPLVLGAAL----PRPIRFVAKKELFKIPF--------LGWLLRLLGAIPI 75 (184)
T ss_pred ceEEEEEccccCCCCCCEEEEECCcch-HHHHHHHhhc----cCceEEEEhHHhhhCch--------HHHHHHHCCeEEE
Confidence 457789999999988999999999954 5886655543 45678888888776643 7888999999998
Q ss_pred cHH----------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhc
Q 005190 515 SGI----------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVL 584 (709)
Q Consensus 515 ~~~----------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~ 584 (709)
++. .+.++|++|..++|||||++... ... .+++.|++++|.++++||+|+++.|.+..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~g~~l~i~peg~~~~~------~~~-~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~-- 146 (184)
T cd07989 76 DRGNGRSAREALREAIEALKEGESVVIFPEGTRSRD------GEL-LPFKSGAFRLAKEAGVPIVPVAISGTWGSLPK-- 146 (184)
T ss_pred ecCCchhHHHHHHHHHHHHHCCCEEEEecCcccCCC------CCc-CCCcccHHHHHHHcCCCEEeEEEeChhhhCcC--
Confidence 652 24667899999999999987421 233 38899999999999999999999886554210
Q ss_pred CccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHH
Q 005190 585 DYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLE 664 (709)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~~~~ 664 (709)
...+..+.++.+.||+||+.+.. ..+.++..++.++
T Consensus 147 -----------------------------------------~~~~~~~~~~~i~~~~pi~~~~~---~~~~~~~~~~~~~ 182 (184)
T cd07989 147 -----------------------------------------GKKLPRPGRVTVRIGEPIPPEGL---ELAEEDRKELREK 182 (184)
T ss_pred -----------------------------------------CCCcCCCCcEEEEEcCCcChhhh---ccchHHHHHHHHh
Confidence 01234467799999999998853 2244444444443
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=137.88 Aligned_cols=176 Identities=18% Similarity=0.189 Sum_probs=134.4
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcC--CceEEEEeCCCCCCC----CHHHHHHHHHHHHHHhhccC-CCCCEEEEEech
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS-PKRPVYLVGESL 204 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~~~~~~-~~~~v~LvGhS~ 204 (709)
.+++|+.||...+......+...|+. +++|+++|+.|+|.| +-....+|+.++.+.++... +.++++|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 57999999997777666666666654 799999999999999 45678899999999999988 478999999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHH
Q 005190 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (709)
Q Consensus 205 GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (709)
|+..++.+|++.| ++++||.+|..+.-... ....+.
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S~~rv~--------~~~~~~---------------------------------- 175 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTSGMRVA--------FPDTKT---------------------------------- 175 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchhhhhhh--------ccCcce----------------------------------
Confidence 9999999999999 89999998844421100 000000
Q ss_pred HHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc-E
Q 005190 285 QDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC-E 363 (709)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~-~ 363 (709)
....+ .+. ..+....|+||+|++||++|.+++... ..++.+..++. +
T Consensus 176 -~~~~d-------------~f~-----------------~i~kI~~i~~PVLiiHgtdDevv~~sH-g~~Lye~~k~~~e 223 (258)
T KOG1552|consen 176 -TYCFD-------------AFP-----------------NIEKISKITCPVLIIHGTDDEVVDFSH-GKALYERCKEKVE 223 (258)
T ss_pred -EEeec-------------ccc-----------------ccCcceeccCCEEEEecccCceecccc-cHHHHHhccccCC
Confidence 00000 000 025568899999999999999999998 99999988764 8
Q ss_pred EEEEcCCCccccccChhhHH
Q 005190 364 PRNFYGHGHFLLLEDGVDLV 383 (709)
Q Consensus 364 ~~~i~~aGH~~~le~p~~~~ 383 (709)
-.++.|+||.-..-.|+-+.
T Consensus 224 pl~v~g~gH~~~~~~~~yi~ 243 (258)
T KOG1552|consen 224 PLWVKGAGHNDIELYPEYIE 243 (258)
T ss_pred CcEEecCCCcccccCHHHHH
Confidence 88999999987766665443
|
|
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-14 Score=162.48 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=90.4
Q ss_pred eeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhc-ceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHHH
Q 005190 440 VRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESN-ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN 518 (709)
Q Consensus 440 ~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~-~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~~ 518 (709)
+..+++++.++|+|+|+||+++ +|.+++...+.+. + ..++++|...++ . +.++.+++.+|++++.|+.
T Consensus 257 ~~~lr~~~~~~~vV~vpNHrS~-lD~lll~~~l~~~-gl~~~~i~Ag~~L~-~--------~~lG~llr~~Ga~fIrR~~ 325 (783)
T PRK03355 257 LAALRALLEEHPAVLLFSHRSY-IDGLVVPVAMQEN-RLPPVHVFGGINLS-F--------GPMGPIMRRSGMIFIRRNI 325 (783)
T ss_pred HHHHHhccCCCCEEEEECCCcc-hHHHHHHHHHhhc-CCCCcEEEeHHHhc-c--------HHHHHHHHHcCcEEecCCC
Confidence 3445678889999999999976 6998887776543 3 567777777775 3 2278899999999999842
Q ss_pred -------------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHH-------HcCCcEEEeeee
Q 005190 519 -------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMAT-------TFGAKIVPFGAV 574 (709)
Q Consensus 519 -------------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~-------~~~~pIvPv~~~ 574 (709)
...++++|.++.+||||||+ ...++. ++|.|..++++ ..++|||||++.
T Consensus 326 ~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRS------rtGkLl-~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~ 394 (783)
T PRK03355 326 GDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRS------RTGKLL-PPKLGLLSYVADAYLDGRSDDVLLQPVSIS 394 (783)
T ss_pred CchHHHHHHHHHHHHHHHhCCCeEEEEecCCCC------CCCCCC-cccccHHHHHHHHHHhcccCCCEEEEEEEE
Confidence 12345678999999999994 445666 99999987775 479999999995
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.4e-14 Score=138.37 Aligned_cols=229 Identities=16% Similarity=0.155 Sum_probs=128.4
Q ss_pred CCCCEEEEeCCCCCCcc-cHH-HHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 130 RDSPLLLFLPGIDGVGL-GLI-RQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~-~~~-~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
...|.||++||+.|++. .|. .+...+ ++||.++++|.|||+.+ .-.-+.+|+..+++.++.+.+..++..
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 35789999999977664 333 366666 58999999999999988 114445899999999988888999999
Q ss_pred EEechhHHHHHHHHHhCC---CceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhH-HHHHh
Q 005190 200 VGESLGACIALAVAARNP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA-MDNVA 275 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 275 (709)
+|.|+||.+.+.+..+.. -..+++++.+| ..+.. ....++.-... .+++......+... ..++.
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P-~Dl~~-----~~~~l~~~~s~------~ly~r~l~~~L~~~~~~kl~ 220 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP-FDLEA-----CAYRLDSGFSL------RLYSRYLLRNLKRNAARKLK 220 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCH-HHHHH-----HHHHhcCchhh------hhhHHHHHHHHHHHHHHHHH
Confidence 999999944444444432 22344444444 22100 00111110000 01111111111110 00010
Q ss_pred h---ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 276 K---RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 276 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
. .... .. ....+........+..++ .+...+....+..+. ......+.+|.+|+|+|++.+|++++++. .
T Consensus 221 ~l~~~~p~-~~-~~~ik~~~ti~eFD~~~T--ap~~Gf~da~dYYr~--aSs~~~L~~Ir~PtLii~A~DDP~~~~~~-i 293 (345)
T COG0429 221 ELEPSLPG-TV-LAAIKRCRTIREFDDLLT--APLHGFADAEDYYRQ--ASSLPLLPKIRKPTLIINAKDDPFMPPEV-I 293 (345)
T ss_pred hcCcccCc-HH-HHHHHhhchHHhccceee--ecccCCCcHHHHHHh--ccccccccccccceEEEecCCCCCCChhh-C
Confidence 0 0000 00 011111111111111110 011111111111111 22346789999999999999999999986 6
Q ss_pred HHHHh-hcCCcEEEEEcCCCcccccc
Q 005190 353 ERLSS-ALHKCEPRNFYGHGHFLLLE 377 (709)
Q Consensus 353 ~~l~~-~~~~~~~~~i~~aGH~~~le 377 (709)
..... ..|++.+.+-+.+||.-++.
T Consensus 294 P~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 294 PKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred CcchhcCCCceEEEeecCCceEEecc
Confidence 66655 77899999999999999988
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.1e-14 Score=148.88 Aligned_cols=120 Identities=19% Similarity=0.266 Sum_probs=94.4
Q ss_pred eeeccCCceeeccCCCCCC---CCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH
Q 005190 431 LSTLANGKIVRGLSGIPSE---GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR 507 (709)
Q Consensus 431 ~~~~~~~~~~~g~e~ip~~---~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~ 507 (709)
.+..+-+.+|+|.||+|.+ +|+|+||||.++ +|.+++...+ ++.+.+++ +| . +.+.++++
T Consensus 266 ~~~~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~-lDp~~l~~al----~R~v~~va---y~-~--------~~ls~ll~ 328 (498)
T PLN02499 266 SRIFGGKVIVKGKPPPPASGGNSGVLFVCTHRTL-MDPVVLSTVL----GRSIPAVT---YS-I--------SRLSEILS 328 (498)
T ss_pred HHhcCceEEEEcCCCCCCcCCCCCEEEEeCCCCc-ccHHHHHHHc----CCceeehH---hh-H--------HHHHHHhc
Confidence 3345567899999999987 799999999976 6998888874 45677777 33 2 22677889
Q ss_pred HhcCccccHH------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhh
Q 005190 508 IMGAVPVSGI------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 579 (709)
Q Consensus 508 ~~g~i~v~~~------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~ 579 (709)
..+++|++|+ .+.++|++|. |+|||||||+ .+..|. +|++||+.+| +|||||++.-...+
T Consensus 329 ~i~avrv~R~r~~d~~air~lL~~G~-lvIFPEGTrs------reg~Ll-rFk~l~aela----~pVVPVAI~~~~~~ 394 (498)
T PLN02499 329 PIPTVRLTRIRDVDAEKIKRELARGD-LVVCPEGTTC------REPFLL-RFSALFAELT----DRIVPVAMNYRVGF 394 (498)
T ss_pred ccCeeeecCCchhHHHHHHHHhhCCC-EEEcCCCCCC------CCCccc-ccchhhhhhc----CceEeEEEEeccce
Confidence 9999999885 3678899999 9999999983 344566 9999999999 89999999544333
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-13 Score=142.19 Aligned_cols=225 Identities=17% Similarity=0.238 Sum_probs=134.5
Q ss_pred CCCEEEEeCCCCCCccc-HH-HHHHHh-cCCceEEEEeCCCCCCCCH-------HHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLG-LI-RQHQRL-GKIFDIWCLHIPVKDRTSF-------TGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~-~~-~~~~~L-~~~~~Vi~~Dl~G~G~Ss~-------~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
..|+||++||+.+++.. |- .++... .+||+|++++.||+|.|.+ ..+.+|+.+++++++.+++..+++.+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 46899999999776653 32 233333 5899999999999999822 56788999999999999999999999
Q ss_pred EechhHHHHHHHHHhCCC---ceeEEEEecCCCCcchhhh--hhhh-HHHhhchhhhHHhHHHhhh----hhcCchhhhH
Q 005190 201 GESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVL--QSTI-PLLELIPGQITTMLSSTLS----LMTGDPLKMA 270 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 270 (709)
|.||||.+.+.|..+-.+ .+.++.+++|+..+..... .... .+.... +...+...+. .+..+....
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~---l~~~l~~~~~~~r~~~~~~~vd~- 279 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRA---LTLNLKRIVLRHRHTLFEDPVDF- 279 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHH---HHHhHHHHHhhhhhhhhhccchh-
Confidence 999999999999987543 4677777777554311110 0000 000000 0000000000 000000000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
+...+. ..++++-+......-..+... +..+ .......+.+|++|+|+|++.+|+++|+..
T Consensus 280 -d~~~~~----~SvreFD~~~t~~~~gf~~~d------------eYY~--~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ 340 (409)
T KOG1838|consen 280 -DVILKS----RSVREFDEALTRPMFGFKSVD------------EYYK--KASSSNYVDKIKVPLLCINAADDPVVPEEA 340 (409)
T ss_pred -hhhhhc----CcHHHHHhhhhhhhcCCCcHH------------HHHh--hcchhhhcccccccEEEEecCCCCCCCccc
Confidence 000000 111111111111000000000 0111 112236789999999999999999999975
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccC
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~ 378 (709)
.-.......|++-+.+-..+||..++|.
T Consensus 341 ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 341 IPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred CCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 3445566778888888999999999986
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=7e-13 Score=134.24 Aligned_cols=259 Identities=17% Similarity=0.168 Sum_probs=162.7
Q ss_pred cccccccCCCCCCC-CCEEEEeCCCCCCcccHHH-------HHHHh-c-------CCceEEEEeCCCCC-CC--------
Q 005190 118 RWFSPLECGSHTRD-SPLLLFLPGIDGVGLGLIR-------QHQRL-G-------KIFDIWCLHIPVKD-RT-------- 172 (709)
Q Consensus 118 ~~~~~~~~g~p~~~-~p~Vv~lHG~~~s~~~~~~-------~~~~L-~-------~~~~Vi~~Dl~G~G-~S-------- 172 (709)
.++.|.+.|..+.. ...||++||+.++...... +++.+ . +.|.|+|.|..|.+ .|
T Consensus 36 ~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p 115 (368)
T COG2021 36 ARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINP 115 (368)
T ss_pred cEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCC
Confidence 58889998886543 4579999999997765552 44443 2 45999999999976 22
Q ss_pred ------------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhh-
Q 005190 173 ------------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ- 238 (709)
Q Consensus 173 ------------s~~~~~~dl~~~l~~~~~~~~~~~v~-LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~- 238 (709)
++.|+++.-..++++ ++.+++. +||.||||+.|+.++..||+.|..+|.+++..........
T Consensus 116 ~g~~yg~~FP~~ti~D~V~aq~~ll~~----LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~ 191 (368)
T COG2021 116 GGKPYGSDFPVITIRDMVRAQRLLLDA----LGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF 191 (368)
T ss_pred CCCccccCCCcccHHHHHHHHHHHHHh----cCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH
Confidence 345665555555555 7777777 9999999999999999999999999998875554332211
Q ss_pred -hhh-HHHhhchhhh------------HHhHHHhhhhhcCchhhhHHHHHhh-----ccC---CchHHHHHHHhHHHhhc
Q 005190 239 -STI-PLLELIPGQI------------TTMLSSTLSLMTGDPLKMAMDNVAK-----RLS---LQPTIQDLSQDLVALSS 296 (709)
Q Consensus 239 -~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~ 296 (709)
... ..+..-|... -..+...+..+.............. ... ....++...+..
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~q----- 266 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQ----- 266 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHH-----
Confidence 111 1111111110 0000111111110000000000000 000 011112222111
Q ss_pred chhhhhhcCChhhHHHHHHHHHHhh-----hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcE-EEEEc-C
Q 005190 297 YLPVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE-PRNFY-G 369 (709)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~-~~~i~-~ 369 (709)
...+...+...++.+..+.+..++ ......|.++++|+|++.-+.|...|++. .+.+.+.++.+. +++++ .
T Consensus 267 -g~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~-~~~~~~~L~~~~~~~~i~S~ 344 (368)
T COG2021 267 -GDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPEL-QRALAEALPAAGALREIDSP 344 (368)
T ss_pred -HHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHH-HHHHHHhccccCceEEecCC
Confidence 124556677778887777776554 23445689999999999999999999997 999999998776 65554 6
Q ss_pred CCccccccChhhHHHHHh
Q 005190 370 HGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 370 aGH~~~le~p~~~~~~I~ 387 (709)
.||..++...+.+...|.
T Consensus 345 ~GHDaFL~e~~~~~~~i~ 362 (368)
T COG2021 345 YGHDAFLVESEAVGPLIR 362 (368)
T ss_pred CCchhhhcchhhhhHHHH
Confidence 799999999999988888
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.5e-13 Score=161.40 Aligned_cols=245 Identities=13% Similarity=0.117 Sum_probs=136.5
Q ss_pred CCCEEEEeCCCCCCcccHHHH-----HHHh-cCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCC
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ-----HQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKR 195 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~-----~~~L-~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~~~~~~ 195 (709)
.+++|||+||++.+...|+.. ++.| .++|+|+++|+ |.+ ++.+++..+.+.++.++... .+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~-~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVT-GR 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhh-CC
Confidence 567899999999999999875 7888 57899999995 444 34555555555555544333 46
Q ss_pred CEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhhhhhh-HHH----hhchhhhHH--hHHHhhh---hhcC
Q 005190 196 PVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTI-PLL----ELIPGQITT--MLSSTLS---LMTG 264 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~~~~~-~~~----~~~~~~~~~--~~~~~~~---~~~~ 264 (709)
+++|+||||||.+++.+|+.+ +++|+++|++++...+......... ... ......+.. .++.++. ....
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 899999999999999998755 5689999998876544221100000 000 000000000 0000000 0000
Q ss_pred chhhhH--HHHHhhccCCch------HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhH------hh---hh
Q 005190 265 DPLKMA--MDNVAKRLSLQP------TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAY------AN---SR 327 (709)
Q Consensus 265 ~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~ 327 (709)
++.... ...........+ ..+.+.... .+. ..+..........+...... .. ..
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~--------~w~-~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~ 292 (994)
T PRK07868 222 DPVKTAKARVDFLRQLHDREALLPREQQRRFLESE--------GWI-AWSGPAISELLKQFIAHNRMMTGGFAINGQMVT 292 (994)
T ss_pred ChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHh--------hcc-ccchHHHHHHHHHHHHhCcccCceEEECCEEcc
Confidence 111000 000000000000 001111000 000 01111111111111110000 11 24
Q ss_pred cccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEE-EEEcCCCcccccc---ChhhHHHHHhhc
Q 005190 328 LHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEP-RNFYGHGHFLLLE---DGVDLVTIIKGA 389 (709)
Q Consensus 328 l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~-~~i~~aGH~~~le---~p~~~~~~I~~~ 389 (709)
+.++++|+|+|+|++|++++++. .+.+.+.++++++ .+++++||+.++- -++++...|.+|
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~-~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~w 357 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPAS-VRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADW 357 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHH
Confidence 78999999999999999999997 9999999999997 6889999997665 456666777766
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=139.42 Aligned_cols=99 Identities=20% Similarity=0.170 Sum_probs=84.9
Q ss_pred CCEEEEeCCCCCCc----ccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 132 SPLLLFLPGIDGVG----LGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~----~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
.++|||+||+++.. ..|..+++.|+ ++|+|+++|+||||.| +++++.+|+..+++.++.. +..+++|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEE
Confidence 56899999998643 35666788885 7899999999999998 5678889999888887654 4678999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+||||||.+++.+|.++|+.++++|+++|...
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999998655
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.6e-13 Score=128.12 Aligned_cols=215 Identities=16% Similarity=0.189 Sum_probs=136.3
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~ 204 (709)
.+.++++|=.||++..|..+...|.....++++++||+|.- +++++++.+...+.. ....+++.+.||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alfGHSm 83 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALFGHSM 83 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeecccch
Confidence 55799999999999999999999988899999999999876 667777776666642 24467999999999
Q ss_pred hHHHHHHHHHhCC---CceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 205 GACIALAVAARNP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 205 GG~iAl~~A~~~P---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
||++|..+|.+.. ....++.+.+...+..... ..+....+. ..+ ..+..+.+-+- ..+...
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~-----~~i~~~~D~--~~l-~~l~~lgG~p~--------e~led~ 147 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG-----KQIHHLDDA--DFL-ADLVDLGGTPP--------ELLEDP 147 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc-----CCccCCCHH--HHH-HHHHHhCCCCh--------HHhcCH
Confidence 9999999998642 2256677766544411110 000111110 000 00111111110 000000
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH- 360 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~- 360 (709)
+...-+.. .++.-......+.. ..-..+.||+.++.|++|..+..+. ...|.+...
T Consensus 148 El~~l~LP-------------------ilRAD~~~~e~Y~~---~~~~pl~~pi~~~~G~~D~~vs~~~-~~~W~~~t~~ 204 (244)
T COG3208 148 ELMALFLP-------------------ILRADFRALESYRY---PPPAPLACPIHAFGGEKDHEVSRDE-LGAWREHTKG 204 (244)
T ss_pred HHHHHHHH-------------------HHHHHHHHhccccc---CCCCCcCcceEEeccCcchhccHHH-HHHHHHhhcC
Confidence 11111110 01111111111111 2225789999999999999999997 887888666
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
..++++++| |||...++.+++.+.|.+.
T Consensus 205 ~f~l~~fdG-gHFfl~~~~~~v~~~i~~~ 232 (244)
T COG3208 205 DFTLRVFDG-GHFFLNQQREEVLARLEQH 232 (244)
T ss_pred CceEEEecC-cceehhhhHHHHHHHHHHH
Confidence 789999996 9999999999988888743
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.9e-13 Score=133.52 Aligned_cols=164 Identities=16% Similarity=0.162 Sum_probs=113.0
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC-CceEEEEeCCCC-------CCC--------------CHHHHHHHHHHHHHHh
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVK-------DRT--------------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~Dl~G~-------G~S--------------s~~~~~~dl~~~l~~~ 188 (709)
..|+||++||++++...|..+++.|.+ .+.+..++++|. |.+ +..+..+.+.++++.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999963 334444444443 111 0122233344444544
Q ss_pred hccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 189 SNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 189 ~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
..+. ..++++|+|||+||.+++.++..+|+.+.++|..++... ..+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------~~~------------------ 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------SLP------------------ 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------ccc------------------
Confidence 4433 246899999999999999999999998887776644110 000
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
.....++|+++++|++|.++
T Consensus 143 ------------------------------------------------------------~~~~~~~pvli~hG~~D~vv 162 (232)
T PRK11460 143 ------------------------------------------------------------ETAPTATTIHLIHGGEDPVI 162 (232)
T ss_pred ------------------------------------------------------------ccccCCCcEEEEecCCCCcc
Confidence 00113579999999999999
Q ss_pred CcHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 347 PSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 347 ~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
|.+. ++.+.+.+. ++++++++++||.+..+.-+.+.+.|.
T Consensus 163 p~~~-~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 163 DVAH-AVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CHHH-HHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 9997 777766543 578889999999997665555555555
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=154.15 Aligned_cols=124 Identities=14% Similarity=0.126 Sum_probs=96.4
Q ss_pred ccCCceee--------ccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhc-ceEeeeccccccccccCCCCCCCChHH
Q 005190 434 LANGKIVR--------GLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESN-ILLRGLAHPMMYFKSKEGGLSDLSPYD 504 (709)
Q Consensus 434 ~~~~~~~~--------g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~-~~~~~la~~~~~~~~~~~~~p~~~~~~ 504 (709)
..+|+.+. ..+++|. .|+||++||.++ +|.+++...+.. .+ ..+++++...+|+.|+ +++
T Consensus 606 ly~gI~V~~~~lerLr~~e~~p~-~pvVfVpNHRS~-lDyLLLsyvL~~-~GL~~P~IAAGdNLL~~P~--------LG~ 674 (1108)
T PTZ00374 606 LYDRVSLNSGAFERLHRYVAMPR-VAVVLLPLHRSY-IDFIIMTYLLAV-MGLPLPHVCAGDDFLRMGP--------IAT 674 (1108)
T ss_pred hcCCEEECcHHHHHHHHHhcCCC-CcEEEEeCCccc-hHHHHHHHHHHh-CCCCceEEEEchhhhcchH--------HHH
Confidence 34566555 3345564 599999999976 598777777654 34 4668999999897743 888
Q ss_pred HHHHhcCccccHHH-------------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHc-------
Q 005190 505 VMRIMGAVPVSGIN-------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF------- 564 (709)
Q Consensus 505 ~~~~~g~i~v~~~~-------------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~------- 564 (709)
+++.+|+++|+|+. ...+|++|.+|.+||||+|+ +..++. +.|.|..+|+.+.
T Consensus 675 LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk~G~sVeiFpEGTRS------RTGKLL-pPK~GlLkmalda~l~g~~~ 747 (1108)
T PTZ00374 675 LMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVLRRRPLEFFIEGTRS------RTGKTM-APKLGLLKFICDTFYEGQQE 747 (1108)
T ss_pred HHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHhCCCeEEEecCcCcC------CCCCcc-cchhhHHHHHHHHHhhcccC
Confidence 99999999998842 24568899999999999984 334555 8899999999987
Q ss_pred --CCcEEEeeeec
Q 005190 565 --GAKIVPFGAVG 575 (709)
Q Consensus 565 --~~pIvPv~~~G 575 (709)
+++||||+|.-
T Consensus 748 v~dV~IVPVSIsY 760 (1108)
T PTZ00374 748 LDDVLIIPVSLSY 760 (1108)
T ss_pred CCCCEEEEEEEeh
Confidence 89999999954
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-13 Score=124.95 Aligned_cols=190 Identities=17% Similarity=0.175 Sum_probs=135.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh--cCCceEEEEeCCCCCCC----CHHHHHHHHHHHHHHhhccC--CCCCEEEEEe
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL--GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS--PKRPVYLVGE 202 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L--~~~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~~~~~~--~~~~v~LvGh 202 (709)
+.|+++++||..|+-...-..+.-+ .-+.+|+.+++||+|.| +-+.+.-|-+++++++..+. ...+++|.|-
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGr 156 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGR 156 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEec
Confidence 5889999999999988877777666 35789999999999999 55777788888888877643 4578999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCch
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (709)
|+||++|+.+|+++.+++.++|+-|+..+.+.....-..+ ++ ...++.+.
T Consensus 157 SlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p----~~---~k~i~~lc----------------------- 206 (300)
T KOG4391|consen 157 SLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP----FP---MKYIPLLC----------------------- 206 (300)
T ss_pred ccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc----ch---hhHHHHHH-----------------------
Confidence 9999999999999999999999998865542221100000 00 00000000
Q ss_pred HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC--
Q 005190 283 TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-- 360 (709)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-- 360 (709)
.+..+. ....+.+-+.|.|+|.|.+|.++||.. ...+.+..|
T Consensus 207 -~kn~~~----------------------------------S~~ki~~~~~P~LFiSGlkDelVPP~~-Mr~Ly~~c~S~ 250 (300)
T KOG4391|consen 207 -YKNKWL----------------------------------SYRKIGQCRMPFLFISGLKDELVPPVM-MRQLYELCPSR 250 (300)
T ss_pred -HHhhhc----------------------------------chhhhccccCceEEeecCccccCCcHH-HHHHHHhCchh
Confidence 000000 012335668899999999999999997 999999887
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
+.++..+|++.|.-..-. +...++|.
T Consensus 251 ~Krl~eFP~gtHNDT~i~-dGYfq~i~ 276 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDTWIC-DGYFQAIE 276 (300)
T ss_pred hhhheeCCCCccCceEEe-ccHHHHHH
Confidence 578899999999754432 23334444
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-11 Score=128.07 Aligned_cols=103 Identities=16% Similarity=0.246 Sum_probs=75.0
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHH---HHhc-CCceEEEEeCCCCC-----C----------C--------C-----H-H
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQH---QRLG-KIFDIWCLHIPVKD-----R----------T--------S-----F-T 175 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~---~~L~-~~~~Vi~~Dl~G~G-----~----------S--------s-----~-~ 175 (709)
....|+|+|+||++++...|.... ..++ .++.|+.+|..++| . + . + .
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 345789999999999887775432 3443 58999999987665 1 1 0 0 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 176 GLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+.+++...++........++++|+||||||..|+.++.++|+.+++++.+++...
T Consensus 124 ~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 124 YVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 13345555555543334567899999999999999999999999999999988644
|
|
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.3e-13 Score=128.30 Aligned_cols=160 Identities=16% Similarity=0.119 Sum_probs=110.2
Q ss_pred CceeeccCCCCC----CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH----H
Q 005190 437 GKIVRGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----I 508 (709)
Q Consensus 437 ~~~~~g~e~ip~----~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~----~ 508 (709)
++++.|.|+++. ++|+|+++||... +|.+.+.... .+..+..+.++. .++ .+..+++ .
T Consensus 3 ~~~i~~~e~l~~~~~~~~~~il~~~H~g~-~e~~~~~~~~---~~~~~~~v~~~~--~~~--------~~~~~~~~~r~~ 68 (192)
T cd07984 3 RVEREGLEHLEAALAKGKGVILLTAHFGN-WELAGLALAL---LGYPVTVVYRPL--KNP--------LLDRLITRGRER 68 (192)
T ss_pred eeEecCHHHHHHHHHcCCCEEEEcccchH-HHHHHHHHHh---cCCCeeEEEECC--CCH--------HHHHHHHHHHHh
Confidence 567888888874 5899999999743 5776655543 244566666653 222 1444554 4
Q ss_pred hcCccccHH----HHHHHhcCCCeEEEecCchhhhhccCCccce---eccCCChhHHHHHHHcCCcEEEeeeecchhhhh
Q 005190 509 MGAVPVSGI----NLYKLMSSKSHVLLYPGGVREALHRKGEEYK---LFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQ 581 (709)
Q Consensus 509 ~g~i~v~~~----~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~---l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~ 581 (709)
.|+.+++++ ++.++|++|..|+|||+|+++... +.... -.-+++.|+++||.++|+||||+++.++
T Consensus 69 ~g~~~i~~~~~~~~~~~~l~~g~~v~i~pD~~~~~~~--~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~----- 141 (192)
T cd07984 69 FGARLIPRGGGLRELIRALKKGEIVGILPDQDPGRKG--GVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRL----- 141 (192)
T ss_pred cCCeeEcCCchHHHHHHHHhCCCEEEEEeCCCCCCCC--CEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEc-----
Confidence 688877663 567789999999999999974221 01000 0114589999999999999999999531
Q ss_pred hhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHH
Q 005190 582 IVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHEL 661 (709)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~~ 661 (709)
.++++.+.|++||++.. .++.+++
T Consensus 142 -------------------------------------------------~~~~~~i~~~~~i~~~~-------~~~~~~~ 165 (192)
T cd07984 142 -------------------------------------------------PGGGYRIEFEPPLENPP-------SEDVEED 165 (192)
T ss_pred -------------------------------------------------CCCCEEEEEeCCCCCCC-------CCCHHHH
Confidence 04679999999998762 3456677
Q ss_pred HHHHHHHHHHHH
Q 005190 662 YLEIKSEVEKCL 673 (709)
Q Consensus 662 ~~~v~~~i~~~~ 673 (709)
.+++.+.+++.+
T Consensus 166 ~~~~~~~lE~~i 177 (192)
T cd07984 166 TQRLNDALEAAI 177 (192)
T ss_pred HHHHHHHHHHHH
Confidence 777777776666
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.4e-12 Score=130.80 Aligned_cols=101 Identities=22% Similarity=0.150 Sum_probs=76.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhc----------cCCCCCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN----------RSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~----------~~~~~~v~L 199 (709)
+.|+|||+||++++...|..+++.|+ .||.|+++|++|++.++.....++..++++.+.. ....++++|
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 47899999999999999999999996 6899999999987654222222333333333322 122367999
Q ss_pred EEechhHHHHHHHHHhCCC-----ceeEEEEecCCCC
Q 005190 200 VGESLGACIALAVAARNPD-----IDLVLILVNPATS 231 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~-----~v~~lVl~~p~~~ 231 (709)
+||||||.+|+.+|..+++ .++++|+++|...
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999874 5789999988654
|
|
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2e-13 Score=128.23 Aligned_cols=156 Identities=18% Similarity=0.187 Sum_probs=117.8
Q ss_pred ccCCceeeccC-------CCCCCCCeEEEeccccchhhHHhhHHHHH-----HHhcceEeeeccccccccccCCCCCCCC
Q 005190 434 LANGKIVRGLS-------GIPSEGPVLFVGYHNLLGLDVLTLIPEFM-----IESNILLRGLAHPMMYFKSKEGGLSDLS 501 (709)
Q Consensus 434 ~~~~~~~~g~e-------~ip~~~p~i~v~NH~~~~~d~~~~~~~~~-----~~~~~~~~~la~~~~~~~~~~~~~p~~~ 501 (709)
..|+..+.+.| +=|++.|.|=|+||++. +|.+.+...+. +..+.+....|+...|.+++
T Consensus 46 g~Nk~~v~n~e~l~~l~~~Rp~n~PLiTVSNH~S~-vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~-------- 116 (286)
T KOG2847|consen 46 GYNKLLVHNRETLTALLESRPPNRPLITVSNHMSC-VDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPF-------- 116 (286)
T ss_pred cccccccccHHHHHHHHHcCCCCCCeEEEecchhc-cCCceeEEEechhhhcchhhhheehhhhhchhccHH--------
Confidence 34566676664 56888999999999953 57776654432 22245677788899999976
Q ss_pred hHHHHHHhcCccccHH---------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCc--EEE
Q 005190 502 PYDVMRIMGAVPVSGI---------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAK--IVP 570 (709)
Q Consensus 502 ~~~~~~~~g~i~v~~~---------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~p--IvP 570 (709)
...+++...++|+.|. -|.+.|..|.-|.|||||.+.. .+.+ ...+|-|..||.+++..+ |+|
T Consensus 117 ~S~fFslGkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~q-----~~~~-~~rfKWGigRlI~ea~~~PIVlP 190 (286)
T KOG2847|consen 117 HSNFFSLGKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVNQ-----MEKE-MLRFKWGIGRLILEAPKPPIVLP 190 (286)
T ss_pred HHHHHhcCceEeeeccCccccccHHHHHHhcCCCCeEEECCCceeec-----cccc-hhheeccceeeeecCCCCCEEee
Confidence 6668899999999994 3788899999999999998732 1222 237899999999998653 689
Q ss_pred eeeecchhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccC-c--cCCCCCceEEEEecCccccCC
Q 005190 571 FGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-Y--PVPKVPGRFYFYFGKPIETKG 647 (709)
Q Consensus 571 v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-~--~~p~~~~~~~~~~G~pI~~~~ 647 (709)
+...|-+|+ +| + ..|.+...+.|.||+||...+
T Consensus 191 i~h~Gmedi--------------------------------------------~P~~~p~vp~~Gk~vtV~IG~P~~~~d 226 (286)
T KOG2847|consen 191 IWHTGMEDI--------------------------------------------MPEAPPYVPRFGKTVTVTIGDPINFDD 226 (286)
T ss_pred hhhhhHHHh--------------------------------------------CccCCCccCCCCCEEEEEeCCCcchhH
Confidence 999998887 44 1 245677889999999999874
Q ss_pred c
Q 005190 648 R 648 (709)
Q Consensus 648 ~ 648 (709)
.
T Consensus 227 ~ 227 (286)
T KOG2847|consen 227 V 227 (286)
T ss_pred H
Confidence 3
|
|
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.3e-13 Score=117.15 Aligned_cols=107 Identities=26% Similarity=0.372 Sum_probs=86.1
Q ss_pred eEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHHH----------HHH
Q 005190 452 VLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN----------LYK 521 (709)
Q Consensus 452 ~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~~----------~~~ 521 (709)
+|+++||++. +|.+++...+.. .+...+.+++..+++.|+ ++.+++..|+++++|.. +.+
T Consensus 1 ~i~v~NH~s~-~D~~~l~~~~~~-~~~~~~~~~~~~~~~~p~--------~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 70 (118)
T smart00563 1 ALVVANHQSF-LDPLVLSALLPR-KGGRVRFVAKKELFYVPL--------LGWLLRLLGAIFIDRENGRLARAALREAVR 70 (118)
T ss_pred CEEEECCCch-HHHHHHHHHccc-ccCceEEEeHHHHhhccH--------HHHHHHHCCCeEEeCCCcHHHHHHHHHHHH
Confidence 5899999974 799888887654 336788999998887744 78899999999997632 445
Q ss_pred HhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeec
Q 005190 522 LMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVG 575 (709)
Q Consensus 522 ~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G 575 (709)
.+++|..++|||||++.... .+. ++++|++++|.+++++|+|+++.|
T Consensus 71 ~l~~~~~~~ifPeG~~~~~~------~~~-~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 71 LLRDGGWLLIFPEGTRSRPG------KLL-PFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred HHhCCCEEEEeCCcccCCCC------CcC-CCcccHHHHHHHcCCCEEeEEEec
Confidence 78899999999999973221 334 789999999999999999999965
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-11 Score=123.04 Aligned_cols=240 Identities=17% Similarity=0.155 Sum_probs=136.0
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCccc-HHHHH-----HHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLG-LIRQH-----QRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVE 182 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~-~~~~~-----~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~ 182 (709)
++..-+|++..++|++|-.|-.|-+... |..+. +.+.+.|.|+-+|.|||..- |.+++++++.
T Consensus 11 v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~ 90 (283)
T PF03096_consen 11 VHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLP 90 (283)
T ss_dssp EEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHH
T ss_pred EEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHH
Confidence 3444567765579999999999988876 66643 45568999999999999654 7799999999
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh--chh-hhHH-hHHHh
Q 005190 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL--IPG-QITT-MLSST 258 (709)
Q Consensus 183 ~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~--~~~-~~~~-~~~~~ 258 (709)
+++++ .+.+.++-+|--.|+.|...+|..+|++|.|+||++|...... ...+....+.. +.. .+.. ....+
T Consensus 91 ~Vl~~----f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g-w~Ew~~~K~~~~~L~~~gmt~~~~d~L 165 (283)
T PF03096_consen 91 EVLDH----FGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG-WMEWFYQKLSSWLLYSYGMTSSVKDYL 165 (283)
T ss_dssp HHHHH----HT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S----HHHHHHHHHH-------CTTS-HHHHH
T ss_pred HHHHh----CCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc-HHHHHHHHHhcccccccccccchHHhh
Confidence 99999 5567899999999999999999999999999999998544211 11111111110 000 0000 01111
Q ss_pred hhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEE
Q 005190 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVL 338 (709)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi 338 (709)
+...++..... ...+.++.... .+.+...+..+...++.... +.+.........||+|++
T Consensus 166 l~h~Fg~~~~~---------~n~Dlv~~yr~----------~l~~~~Np~Nl~~f~~sy~~-R~DL~~~~~~~~c~vLlv 225 (283)
T PF03096_consen 166 LWHYFGKEEEE---------NNSDLVQTYRQ----------HLDERINPKNLALFLNSYNS-RTDLSIERPSLGCPVLLV 225 (283)
T ss_dssp HHHHS-HHHHH---------CT-HHHHHHHH----------HHHT-TTHHHHHHHHHHHHT------SECTTCCS-EEEE
T ss_pred hhccccccccc---------ccHHHHHHHHH----------HHhcCCCHHHHHHHHHHHhc-cccchhhcCCCCCCeEEE
Confidence 11122211100 01111211111 22222344444444443332 233444556678999999
Q ss_pred eeCCCCCCCcHHHHHHHHhhc-C-CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 339 CSGKDQLMPSQEEGERLSSAL-H-KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 339 ~G~~D~~v~~~~~~~~l~~~~-~-~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
.|++.+..... ..+...+ | +.++..+++||=.+..|+|+++++.++
T Consensus 226 vG~~Sp~~~~v---v~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 226 VGDNSPHVDDV---VEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp EETTSTTHHHH---HHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred EecCCcchhhH---HHHHhhcCcccceEEEecccCCcccccCcHHHHHHHH
Confidence 99999887543 3555544 3 688999999999999999999999888
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=113.72 Aligned_cols=208 Identities=13% Similarity=0.111 Sum_probs=127.0
Q ss_pred CCEEEEeCCCCCCcc--cHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 132 SPLLLFLPGIDGVGL--GLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~--~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
..++|++||+-++.. ....++.+|+ .++.++.+|.+|.|.| .+...++|+..+++++.... ..--+++|
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v~vi~g 111 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVVPVILG 111 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEEEEEEe
Confidence 568999999977653 4555778884 7899999999999999 44777899999999976532 22346899
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
||-||.+++.+|.++++ ++-+|-++.-.. ....... +.-+.. +.+....-+-+. .. .+....
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRyd-l~~~I~e-----Rlg~~~----l~~ike~Gfid~---~~---rkG~y~- 173 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYD-LKNGINE-----RLGEDY----LERIKEQGFIDV---GP---RKGKYG- 173 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccc-hhcchhh-----hhcccH----HHHHHhCCceec---Cc---ccCCcC-
Confidence 99999999999999987 444444433111 1110000 000000 000000000000 00 000000
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccC--CccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAV--KAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
..+....+ +.....+..+...+| +||||-+||..|.++|.++ +..+++.+
T Consensus 174 ---------------------~rvt~eSl------mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~-AkefAk~i 225 (269)
T KOG4667|consen 174 ---------------------YRVTEESL------MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVED-AKEFAKII 225 (269)
T ss_pred ---------------------ceecHHHH------HHHHhchhhhhhcCcCccCceEEEeccCCceeechh-HHHHHHhc
Confidence 00000000 011111111222334 7999999999999999998 99999999
Q ss_pred CCcEEEEEcCCCccccccChhhHHHHHh
Q 005190 360 HKCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 360 ~~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
|+-++.+++|+.|.....+ .+++.+..
T Consensus 226 ~nH~L~iIEgADHnyt~~q-~~l~~lgl 252 (269)
T KOG4667|consen 226 PNHKLEIIEGADHNYTGHQ-SQLVSLGL 252 (269)
T ss_pred cCCceEEecCCCcCccchh-hhHhhhcc
Confidence 9999999999999876543 34444444
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.1e-11 Score=123.26 Aligned_cols=100 Identities=18% Similarity=0.236 Sum_probs=72.5
Q ss_pred CCCEEEEeCCCCCCcccHHHH--HHHhc--CCceEEEEeC--CCCCCCC----------------------------HHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ--HQRLG--KIFDIWCLHI--PVKDRTS----------------------------FTG 176 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~--~~~L~--~~~~Vi~~Dl--~G~G~Ss----------------------------~~~ 176 (709)
+.|+|+|+||++++...|... ...++ .++.|+++|. +|+|.+. ...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 478999999999999888543 34553 4899999998 5554221 112
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 177 ~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+.+++..+++.... ...++++++||||||.+|+.++.++|+.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 23444444443211 2346899999999999999999999999999999988644
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-12 Score=135.41 Aligned_cols=118 Identities=20% Similarity=0.201 Sum_probs=85.0
Q ss_pred eeeccCCceeeccC--CCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHH
Q 005190 431 LSTLANGKIVRGLS--GIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRI 508 (709)
Q Consensus 431 ~~~~~~~~~~~g~e--~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~ 508 (709)
++..+-+.+++|.. ..+.++|+|+||||+++ +|.+++...+.+ ..++++ .|+.++ ++++++.
T Consensus 306 ~~~~Gvrl~v~g~~p~~~~~~~gvI~V~NH~S~-LDPi~L~~Al~r---r~I~~m----tFsip~--------lg~lL~~ 369 (525)
T PLN02588 306 LAFSGIHLTLTVNDLISSDRKKGCLFVCNHRTL-LDPLYISYALRK---KNIKAV----TYSLSR--------LSELLAP 369 (525)
T ss_pred HHHcCcEEEEEeCCCCCCCCCCCEEEEECCcch-hhHHHHHHHccc---CcceEE----EEEhHH--------HHHHHHh
Confidence 33444566777443 22345799999999976 698888887531 234444 344422 7889999
Q ss_pred hcCccccHHH------HHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecc
Q 005190 509 MGAVPVSGIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGE 576 (709)
Q Consensus 509 ~g~i~v~~~~------~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~ 576 (709)
+++++++|++ +.++|++|. ++|||||||+ .+..+. +||+||+.+| ++||||++.-.
T Consensus 370 i~ti~VdRdr~~D~~aI~~LLk~Gd-lVIFPEGTRs------r~g~Ll-rFk~l~A~la----~~IVPVAI~~~ 431 (525)
T PLN02588 370 IKTVRLTRDRVKDGQAMEKLLSQGD-LVVCPEGTTC------REPYLL-RFSPLFSEVC----DVIVPVAIDSH 431 (525)
T ss_pred cCceeecCCCcchHHHHHHHHhCCC-EEEccCcccc------CCCccc-ChhhhHHHhc----CceeeEEEEEe
Confidence 9999999864 556777777 7799999983 344566 9999999987 78999999643
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.2e-10 Score=111.99 Aligned_cols=94 Identities=19% Similarity=0.161 Sum_probs=82.1
Q ss_pred CEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 133 PLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
.+||-+||-+||...|..+.+.| ..+.+++++.+||+|.+ +-.+-...+.++++.+.- .++++.+|||
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i---~~~~i~~gHS 112 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI---KGKLIFLGHS 112 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC---CCceEEEEec
Confidence 38999999999999999999999 58999999999999988 557777888888887432 3689999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.||-.|+.+|..+| +.|+++++|..-
T Consensus 113 rGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 113 RGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred cchHHHHHHHhcCc--cceEEEecCCcc
Confidence 99999999999996 569999999554
|
|
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-11 Score=128.57 Aligned_cols=199 Identities=14% Similarity=0.129 Sum_probs=125.2
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHH-hcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE-SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 515 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~ 515 (709)
++++.| |++|.++++|+++||++. +|.+++.....+. ....+++++++.+++.|+ +++.++.+|.|+++
T Consensus 80 kv~v~G-e~l~~~~~~IiiaNH~S~-~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~--------~Gw~~~~~g~I~v~ 149 (374)
T PLN02510 80 KVVFSG-DKVPPEERVLLIANHRTE-VDWMYLWDLALRKGCLGYIKYVLKSSLMKLPV--------FGWAFHIFEFIPVE 149 (374)
T ss_pred EEEEEe-ecCCCCCcEEEEECCCch-HHHHHHHHHHHhcCCCcccEEEEeHHHhhchH--------HHHHHHHcCCeeee
Confidence 668899 889888999999999975 6987776554332 225689999999998754 77789999999999
Q ss_pred HHH---------HHHHhcCC---CeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhh
Q 005190 516 GIN---------LYKLMSSK---SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIV 583 (709)
Q Consensus 516 ~~~---------~~~~L~~g---~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~ 583 (709)
|+. +.+.++++ ..++|||||||... ..+.|+.++|.++|+||+.-.+.--
T Consensus 150 R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~-----------~~~~~s~~~A~k~glPil~~vL~PR------- 211 (374)
T PLN02510 150 RKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTE-----------AKCQRSQKFAAEHGLPILNNVLLPK------- 211 (374)
T ss_pred CCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCc-----------cccchHHHHHHHcCCCcceeEEcCc-------
Confidence 742 33445543 57999999999421 2247789999999999998887321
Q ss_pred cCccccccCccchHHHHHHHhhhhhccccccccccCcccccC---cc-CCCCCceEEEEecCccccCCcccccCCHHHHH
Q 005190 584 LDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP---YP-VPKVPGRFYFYFGKPIETKGRKRELRDREKAH 659 (709)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p---~~-~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~ 659 (709)
..-+...++.+......+. +.+ +++.+- .| .+ .-..|.++++++= -++.++. ..++++.+
T Consensus 212 --------t~Gf~~~l~~L~~~l~~Iy-DvT--i~Y~~~-~Ps~~~~~~g~~p~~vhihvr-r~pi~~i---P~~~~~~~ 275 (374)
T PLN02510 212 --------TKGFVSCLQELRCSLDAVY-DVT--IGYKHR-CPSFLDNVFGIDPSEVHIHIR-RIPLKQI---PTSEDEVS 275 (374)
T ss_pred --------cccHHHHHHHHHHHHHhhe-eEE--EEeCCC-CCCHHHHhcCCCCcEEEEEEE-EEECccc---cCcHHHHH
Confidence 1112222222222111111 000 000000 12 11 1112566777663 3444432 23566777
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 005190 660 ELYLEIKSEVEKCLAYLKEK 679 (709)
Q Consensus 660 ~~~~~v~~~i~~~~~~l~~~ 679 (709)
+...+.-.+=+++++++.+.
T Consensus 276 ~WL~~~w~eKD~lL~~f~~~ 295 (374)
T PLN02510 276 AWLMDRFQLKDQLLSDFYAQ 295 (374)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 77777777788888888765
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-11 Score=121.72 Aligned_cols=181 Identities=19% Similarity=0.187 Sum_probs=110.7
Q ss_pred HHHHHHHh-cCCceEEEEeCCCCCCC----------CH-HHHHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHH
Q 005190 148 LIRQHQRL-GKIFDIWCLHIPVKDRT----------SF-TGLVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVA 213 (709)
Q Consensus 148 ~~~~~~~L-~~~~~Vi~~Dl~G~G~S----------s~-~~~~~dl~~~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A 213 (709)
|......| .+||.|+.+|+||.+.. .+ ....+|+.+.++++.... ..+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44556677 68999999999998854 11 446778888888876654 347899999999999999999
Q ss_pred HhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHH
Q 005190 214 ARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVA 293 (709)
Q Consensus 214 ~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (709)
.++|+.++++|..++............. ... ..... .+.+ .. ....+....
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~-----~~~------~~~~~--~~~~--------------~~-~~~~~~~~s- 133 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI-----YTK------AEYLE--YGDP--------------WD-NPEFYRELS- 133 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC-----HHH------GHHHH--HSST--------------TT-SHHHHHHHH-
T ss_pred cccceeeeeeeccceecchhcccccccc-----ccc------ccccc--cCcc--------------ch-hhhhhhhhc-
Confidence 9999999999998885543221110000 000 00000 0000 00 000010000
Q ss_pred hhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhccc--CCccEEEEeeCCCCCCCcHHHHHHHHhhc----CCcEEEEE
Q 005190 294 LSSYLPVLADILPKETLLWKIELLKAASAYANSRLHA--VKAQMLVLCSGKDQLMPSQEEGERLSSAL----HKCEPRNF 367 (709)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLvi~G~~D~~v~~~~~~~~l~~~~----~~~~~~~i 367 (709)
....+.+ +++|+|+++|++|..||.+. +..+.+.+ .+++++++
T Consensus 134 ------------------------------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~-s~~~~~~L~~~g~~~~~~~~ 182 (213)
T PF00326_consen 134 ------------------------------PISPADNVQIKPPVLIIHGENDPRVPPSQ-SLRLYNALRKAGKPVELLIF 182 (213)
T ss_dssp ------------------------------HGGGGGGCGGGSEEEEEEETTBSSSTTHH-HHHHHHHHHHTTSSEEEEEE
T ss_pred ------------------------------cccccccccCCCCEEEEccCCCCccCHHH-HHHHHHHHHhcCCCEEEEEc
Confidence 0122344 78999999999999999997 77666533 35899999
Q ss_pred cCCCcccccc-ChhhHHHHHhh
Q 005190 368 YGHGHFLLLE-DGVDLVTIIKG 388 (709)
Q Consensus 368 ~~aGH~~~le-~p~~~~~~I~~ 388 (709)
|++||..... ...+..+.+.+
T Consensus 183 p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 183 PGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp TT-SSSTTSHHHHHHHHHHHHH
T ss_pred CcCCCCCCCchhHHHHHHHHHH
Confidence 9999955533 23334444443
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.2e-11 Score=127.21 Aligned_cols=233 Identities=15% Similarity=0.105 Sum_probs=140.9
Q ss_pred CCCEEEEeCCCCCCcccH-----HHHHHHh-cCCceEEEEeCCCCCCC----CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGL-----IRQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~-----~~~~~~L-~~~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
...+||++|.+-.-...+ ..+++.| .+|++|+++|+++-+.. +++++++.+.+.++.++...+.+++.++
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~ 293 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLL 293 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEE
Confidence 456799999987544445 3477777 69999999999988766 7899999999999999998888999999
Q ss_pred EechhHHHHHH----HHHhCCC-ceeEEEEecCCCCcchhh-hhhhh--HHH---h-------hchhhhHHhHHHhhhhh
Q 005190 201 GESLGACIALA----VAARNPD-IDLVLILVNPATSFNKSV-LQSTI--PLL---E-------LIPGQITTMLSSTLSLM 262 (709)
Q Consensus 201 GhS~GG~iAl~----~A~~~P~-~v~~lVl~~p~~~~~~~~-~~~~~--~~~---~-------~~~~~~~~~~~~~~~~~ 262 (709)
|||+||.+++. +|+++++ +|++++++.+...+.... ..... ..+ . .++.. .+...+..+
T Consensus 294 GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~---~ma~~F~~L 370 (560)
T TIGR01839 294 GACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGS---EMAKVFAWM 370 (560)
T ss_pred EECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHH---HHHHHHHhc
Confidence 99999999997 7888886 799999987766655322 11100 000 0 01110 011111111
Q ss_pred cCchh--hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHh----------hhhccc
Q 005190 263 TGDPL--KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYA----------NSRLHA 330 (709)
Q Consensus 263 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~ 330 (709)
..+.+ ....... ..........+... ..-...++...+.+.+++..... .. .-.+.+
T Consensus 371 rP~dliw~y~v~~y--llg~~p~~fdll~W--------n~D~t~lPg~~~~e~l~ly~~N~-L~~pG~l~v~G~~idL~~ 439 (560)
T TIGR01839 371 RPNDLIWNYWVNNY--LLGNEPPAFDILYW--------NNDTTRLPAAFHGDLLDMFKSNP-LTRPDALEVCGTPIDLKK 439 (560)
T ss_pred CchhhhHHHHHHHh--hcCCCcchhhHHHH--------hCcCccchHHHHHHHHHHHhcCC-CCCCCCEEECCEEechhc
Confidence 11100 0000000 00000000000000 00011234444444443332111 11 126788
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccccCh
Q 005190 331 VKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 331 i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le~p 379 (709)
|+||++++.|.+|+++|.+. +..+.+.+. +.+++.. .+||..=.=+|
T Consensus 440 I~~Pvl~va~~~DHIvPw~s-~~~~~~l~gs~~~fvl~-~gGHIggivnp 487 (560)
T TIGR01839 440 VKCDSFSVAGTNDHITPWDA-VYRSALLLGGKRRFVLS-NSGHIQSILNP 487 (560)
T ss_pred CCCCeEEEecCcCCcCCHHH-HHHHHHHcCCCeEEEec-CCCccccccCC
Confidence 99999999999999999997 888888776 4555555 56998654444
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.9e-11 Score=121.01 Aligned_cols=169 Identities=18% Similarity=0.205 Sum_probs=101.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHH-h-cCCceEEEEeCCC------CCC---C----------------CHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQR-L-GKIFDIWCLHIPV------KDR---T----------------SFTGLVKLVES 183 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~-L-~~~~~Vi~~Dl~G------~G~---S----------------s~~~~~~dl~~ 183 (709)
..++|||+||+|++...+...... + .....+++++-|- .|. + .+....+.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 577999999999999777666552 2 2456676665431 232 1 12333444556
Q ss_pred HHHHhhcc-CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhh
Q 005190 184 TVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 184 ~l~~~~~~-~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
+++..... .+.++++|.|+|.||++|+.++.++|+.+.++|.+++........
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~-------------------------- 146 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL-------------------------- 146 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------------------
Confidence 66654332 345789999999999999999999999999999998743311000
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
... .. ..-++|++++||.+
T Consensus 147 -------------------------~~~----------------------------------~~--~~~~~pi~~~hG~~ 165 (216)
T PF02230_consen 147 -------------------------EDR----------------------------------PE--ALAKTPILIIHGDE 165 (216)
T ss_dssp -------------------------HCC----------------------------------HC--CCCTS-EEEEEETT
T ss_pred -------------------------ccc----------------------------------cc--ccCCCcEEEEecCC
Confidence 000 00 11168999999999
Q ss_pred CCCCCcHHHHHHHHhhc----CCcEEEEEcCCCccccccChhhHHHHHh
Q 005190 343 DQLMPSQEEGERLSSAL----HKCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~----~~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
|+++|.+. ++...+.+ .+++++.+++.||.+..+.-..+.+.|.
T Consensus 166 D~vvp~~~-~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 166 DPVVPFEW-AEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLE 213 (216)
T ss_dssp -SSSTHHH-HHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHH
T ss_pred CCcccHHH-HHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHh
Confidence 99999885 66555533 3689999999999998655555555554
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.6e-11 Score=113.98 Aligned_cols=240 Identities=14% Similarity=0.122 Sum_probs=150.7
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCccc-HHHHH-----HHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLG-LIRQH-----QRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVE 182 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~-~~~~~-----~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~ 182 (709)
++...+|+|.+++|++|-.|.++-+... |..+. ..+...|.|+-+|.|||-.- |.+++++++.
T Consensus 34 v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~ 113 (326)
T KOG2931|consen 34 VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLP 113 (326)
T ss_pred EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHH
Confidence 3445567776678899999999998876 66543 34456699999999999433 7899999999
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHh-hch--hhhHHhH-HHh
Q 005190 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIP--GQITTML-SST 258 (709)
Q Consensus 183 ~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~-~~~ 258 (709)
.++++ .+.+.++-+|.-.|+.|...+|..||++|.|+||+++.... .....+....+. .+. ..+.... ..+
T Consensus 114 ~VL~~----f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a-~gwiew~~~K~~s~~l~~~Gmt~~~~d~l 188 (326)
T KOG2931|consen 114 EVLDH----FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA-KGWIEWAYNKVSSNLLYYYGMTQGVKDYL 188 (326)
T ss_pred HHHHh----cCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC-chHHHHHHHHHHHHHHHhhchhhhHHHHH
Confidence 99999 66778999999999999999999999999999999984432 111111111111 000 0011111 111
Q ss_pred hhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhh---hh-cccCCcc
Q 005190 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYAN---SR-LHAVKAQ 334 (709)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-l~~i~~P 334 (709)
+...++..... ...+.++... ..+........+..+++...... +.. .. ...++||
T Consensus 189 l~H~Fg~e~~~---------~~~diVq~Yr----------~~l~~~~N~~Nl~~fl~ayn~R~-DL~~~r~~~~~tlkc~ 248 (326)
T KOG2931|consen 189 LAHHFGKEELG---------NNSDIVQEYR----------QHLGERLNPKNLALFLNAYNGRR-DLSIERPKLGTTLKCP 248 (326)
T ss_pred HHHHhcccccc---------ccHHHHHHHH----------HHHHhcCChhHHHHHHHHhcCCC-CccccCCCcCcccccc
Confidence 11122211000 0111111111 12223334444444444433211 111 11 1266799
Q ss_pred EEEEeeCCCCCCCcHHHHHHHHhhcC--CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 335 MLVLCSGKDQLMPSQEEGERLSSALH--KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 335 vLvi~G~~D~~v~~~~~~~~l~~~~~--~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
+|++.|++.+.+.... .+...+. +..+..+.+||-.+..++|.++++.++
T Consensus 249 vllvvGd~Sp~~~~vv---~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~ 300 (326)
T KOG2931|consen 249 VLLVVGDNSPHVSAVV---ECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK 300 (326)
T ss_pred EEEEecCCCchhhhhh---hhhcccCcccceEEEEcccCCcccccCchHHHHHHH
Confidence 9999999998875442 4444332 678899999999999999999999888
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.4e-11 Score=118.05 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=75.6
Q ss_pred CCCEEEEeCCCCCCcccHH---HHHHHh-cCCceEEEEeCCCCCCC--CH-----------HHHHHHHHHHHHHhhccCC
Q 005190 131 DSPLLLFLPGIDGVGLGLI---RQHQRL-GKIFDIWCLHIPVKDRT--SF-----------TGLVKLVESTVRSESNRSP 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~---~~~~~L-~~~~~Vi~~Dl~G~G~S--s~-----------~~~~~dl~~~l~~~~~~~~ 193 (709)
..|+||++||.+++...+. .+.... ..+|.|+++|.+|++.+ .+ .....++..+++.+.....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5789999999998877665 233333 36899999999998743 11 1234566667776665543
Q ss_pred --CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 194 --KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 194 --~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
.++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3589999999999999999999999999988887643
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.2e-11 Score=129.90 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=81.2
Q ss_pred CCCEEEEeCCCCCCc--ccHHH-HHHHhc---CCceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhcc--CCCC
Q 005190 131 DSPLLLFLPGIDGVG--LGLIR-QHQRLG---KIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNR--SPKR 195 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~--~~~~~-~~~~L~---~~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~--~~~~ 195 (709)
+.|++|++||++++. ..|.. +...|. ..++|+++|++|+|.|. ...+++++.++++.+... .+.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998764 34665 455542 36999999999999872 245667788888876533 3467
Q ss_pred CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+++|+||||||.+|..++..+|++|.++++++|+.+.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 9999999999999999999999999999999997653
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.2e-11 Score=112.65 Aligned_cols=156 Identities=19% Similarity=0.220 Sum_probs=102.3
Q ss_pred EEEeCCCCCCc-ccHHHHH-HHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHH
Q 005190 135 LLFLPGIDGVG-LGLIRQH-QRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAV 212 (709)
Q Consensus 135 Vv~lHG~~~s~-~~~~~~~-~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~ 212 (709)
|+++||++++. ..|..+. +.|...++|..+|+ ..-+.++|.+.+.+.+.. . .++++|||||+||..++.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~---~~P~~~~W~~~l~~~i~~----~-~~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW---DNPDLDEWVQALDQAIDA----I-DEPTILVAHSLGCLTALRW 72 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-----TS--HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc---CCCCHHHHHHHHHHHHhh----c-CCCeEEEEeCHHHHHHHHH
Confidence 68999998876 4677654 55665577777776 222677777777776654 2 4579999999999999999
Q ss_pred H-HhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhH
Q 005190 213 A-ARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291 (709)
Q Consensus 213 A-~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (709)
+ ......|.|++|++|......... .+. . . .+..
T Consensus 73 l~~~~~~~v~g~lLVAp~~~~~~~~~---------~~~--------~-~-------------------------~f~~-- 107 (171)
T PF06821_consen 73 LAEQSQKKVAGALLVAPFDPDDPEPF---------PPE--------L-D-------------------------GFTP-- 107 (171)
T ss_dssp HHHTCCSSEEEEEEES--SCGCHHCC---------TCG--------G-C-------------------------CCTT--
T ss_pred HhhcccccccEEEEEcCCCcccccch---------hhh--------c-c-------------------------cccc--
Confidence 9 777889999999998544200000 000 0 0 0000
Q ss_pred HHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCC
Q 005190 292 VALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHG 371 (709)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aG 371 (709)
.....+.+|.++|.+++|+++|.+. ++.+++.+ +++++.++++|
T Consensus 108 ----------------------------------~p~~~l~~~~~viaS~nDp~vp~~~-a~~~A~~l-~a~~~~~~~~G 151 (171)
T PF06821_consen 108 ----------------------------------LPRDPLPFPSIVIASDNDPYVPFER-AQRLAQRL-GAELIILGGGG 151 (171)
T ss_dssp ----------------------------------SHCCHHHCCEEEEEETTBSSS-HHH-HHHHHHHH-T-EEEEETS-T
T ss_pred ----------------------------------CcccccCCCeEEEEcCCCCccCHHH-HHHHHHHc-CCCeEECCCCC
Confidence 0012234677999999999999997 99999988 79999999999
Q ss_pred ccccccCh
Q 005190 372 HFLLLEDG 379 (709)
Q Consensus 372 H~~~le~p 379 (709)
|+.-.+--
T Consensus 152 Hf~~~~G~ 159 (171)
T PF06821_consen 152 HFNAASGF 159 (171)
T ss_dssp TSSGGGTH
T ss_pred CcccccCC
Confidence 99876643
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.4e-11 Score=116.31 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=108.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCC---C---------------CHHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDR---T---------------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~---S---------------s~~~~~~dl~~~l~~~~~~ 191 (709)
+.|.||++|++.|-......+++.|+ +||.|+++|+-+-.. + ..+...+++.+.++.++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 36789999999887777777888994 899999999865544 1 1135567777888887765
Q ss_pred C--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 192 S--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 192 ~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
. ...++.++|+|+||.+|+.+|... ..+++.|..-|.... .
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~-~----------------------------------- 135 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP-P----------------------------------- 135 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-G-----------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-C-----------------------------------
Confidence 5 357899999999999999999887 568888876550000 0
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
. ......++++|+++++|++|+.++.+
T Consensus 136 --------------------~---------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~ 162 (218)
T PF01738_consen 136 --------------------P---------------------------------PLEDAPKIKAPVLILFGENDPFFPPE 162 (218)
T ss_dssp --------------------G---------------------------------HHHHGGG--S-EEEEEETT-TTS-HH
T ss_pred --------------------c---------------------------------chhhhcccCCCEeecCccCCCCCChH
Confidence 0 00123568899999999999999998
Q ss_pred HHHHHHHhhc----CCcEEEEEcCCCccccccChh
Q 005190 350 EEGERLSSAL----HKCEPRNFYGHGHFLLLEDGV 380 (709)
Q Consensus 350 ~~~~~l~~~~----~~~~~~~i~~aGH~~~le~p~ 380 (709)
. .+.+.+.+ ..+++++++|++|........
T Consensus 163 ~-~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 163 E-VEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp H-HHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred H-HHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 6 66655544 579999999999998876544
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.8e-10 Score=113.74 Aligned_cols=173 Identities=16% Similarity=0.165 Sum_probs=115.5
Q ss_pred cCCCcccccccccchhhhhhHHHHHhhhhccccccccccCCC--------CcHhhHH----HHHHHh------hcccCCC
Q 005190 53 TETTPTRIFVEKKSSELVEDEAETKQRVNVREYSEEESEGNG--------KSLKDYF----DEAEDM------IKSSSGG 114 (709)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~~------~~~~~~g 114 (709)
....+++..+++...+.+++++....+..+..+....+-|+. +.|.+-+ .+..++ .+....|
T Consensus 54 ~~I~~Fki~v~~seI~dlk~rL~r~r~l~~ple~~~f~YGFNtnyl~kvv~ywr~~y~~~W~e~e~~ln~f~qykTeIeG 133 (469)
T KOG2565|consen 54 DEIYPFKISVKQSEIDDLKERLNRTRFLPPPLEGSAFEYGFNTNYLKKVVEYWRDLYLPKWKEREEFLNQFKQYKTEIEG 133 (469)
T ss_pred CceeeeeccCCHHHHHHHHHHHhhhhcCCCcccccchhhccchHHHHHHHHHHHHhhcccHHHHHHHHHhhhhhhhhhcc
Confidence 345667777777777888888777776654333322222332 2222211 111111 1222367
Q ss_pred CCCcccccccCCCCCCCC-CEEEEeCCCCCCcccHHHHHHHhcC----------CceEEEEeCCCCCCC--------CHH
Q 005190 115 GPPRWFSPLECGSHTRDS-PLLLFLPGIDGVGLGLIRQHQRLGK----------IFDIWCLHIPVKDRT--------SFT 175 (709)
Q Consensus 115 ~~~~~~~~~~~g~p~~~~-p~Vv~lHG~~~s~~~~~~~~~~L~~----------~~~Vi~~Dl~G~G~S--------s~~ 175 (709)
-.+.+++......+.++. -+||++|||+||-..|..+++.|.+ .|.|+++.+||+|.| ...
T Consensus 134 L~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~ 213 (469)
T KOG2565|consen 134 LKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAA 213 (469)
T ss_pred eeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHH
Confidence 667777765442222222 2699999999999999999999942 289999999999999 234
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 176 GLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
+.+.-+..++ .+++..++++-|..||+.|+..+|..+|+.|.|+-+-.+.
T Consensus 214 a~ArvmrkLM----lRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 214 ATARVMRKLM----LRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred HHHHHHHHHH----HHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 4444455544 4577889999999999999999999999999988775443
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.5e-10 Score=111.74 Aligned_cols=95 Identities=21% Similarity=0.321 Sum_probs=79.9
Q ss_pred EEEEeCCCCCCcccHHHHHHHhcCC-ceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 134 LLLFLPGIDGVGLGLIRQHQRLGKI-FDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~~~~~L~~~-~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
+|+|+|+.+|+...|..+++.|... +.|++++.+|.+.. +++++++...+.|.. ..+..+++|+|||+||.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~---~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRA---RQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHH---HTSSSSEEEEEETHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhh---hCCCCCeeehccCccHH
Confidence 6999999999999999999999886 99999999999733 888888887766655 34445999999999999
Q ss_pred HHHHHHHhC---CCceeEEEEecCCCC
Q 005190 208 IALAVAARN---PDIDLVLILVNPATS 231 (709)
Q Consensus 208 iAl~~A~~~---P~~v~~lVl~~p~~~ 231 (709)
+|..+|.+- ...+..++++++..+
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999764 455889999997544
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.9e-11 Score=121.96 Aligned_cols=102 Identities=15% Similarity=0.119 Sum_probs=81.6
Q ss_pred CCCEEEEeCCCCCCc-ccHHHH-HHHh-c-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCCCE
Q 005190 131 DSPLLLFLPGIDGVG-LGLIRQ-HQRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~~-~~~L-~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~--~~~~~v 197 (709)
+.|++|++||+.++. ..|... ...+ . .+++|+++|+++++.+ +...+.+++..+++.+... .+.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 578899999999988 667654 4434 3 5799999999998554 3345567777888776654 345789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+||||||||.+|..++..+|+++.++++++|+.+.
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 99999999999999999999999999999997654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-10 Score=132.18 Aligned_cols=185 Identities=18% Similarity=0.174 Sum_probs=112.5
Q ss_pred CCEEEEeCCCCCCccc--HHHHHHHh-cCCceEEEEeCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--CCC
Q 005190 132 SPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS--PKR 195 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~---------~~~~~dl~~~l~~~~~~~--~~~ 195 (709)
-|+||++||.+..... |....+.| .+||.|+.++.||.+.- +| ....+|+.+.++.+...- ..+
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 473 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPE 473 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChH
Confidence 4899999999765544 55566666 58999999999976442 11 234455555555332222 235
Q ss_pred CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHh
Q 005190 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVA 275 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (709)
++.+.|||+||.+++..+.+.| .+++.+...+..............+.. ........+
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~--------- 531 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRF------------DPEENGGGP--------- 531 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcC------------CHHHhCCCc---------
Confidence 8999999999999999999988 555555444422210000000000000 000000000
Q ss_pred hccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005190 276 KRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 355 (709)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l 355 (709)
. . ....+.. ........++++|+|+|||++|..++.++ +.++
T Consensus 532 ----~-~-~~~~~~~-------------------------------~sp~~~~~~i~~P~LliHG~~D~~v~~~q-~~~~ 573 (620)
T COG1506 532 ----P-E-DREKYED-------------------------------RSPIFYADNIKTPLLLIHGEEDDRVPIEQ-AEQL 573 (620)
T ss_pred ----c-c-ChHHHHh-------------------------------cChhhhhcccCCCEEEEeecCCccCChHH-HHHH
Confidence 0 0 0000000 01113347899999999999999999997 7777
Q ss_pred HhhcC----CcEEEEEcCCCccccc
Q 005190 356 SSALH----KCEPRNFYGHGHFLLL 376 (709)
Q Consensus 356 ~~~~~----~~~~~~i~~aGH~~~l 376 (709)
.+.+. +++++++|+.||.+.-
T Consensus 574 ~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 574 VDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred HHHHHHcCceEEEEEeCCCCcCCCC
Confidence 76443 6899999999999986
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=111.02 Aligned_cols=168 Identities=20% Similarity=0.195 Sum_probs=117.1
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCC--CC---------CC--CHHHHHHH---HHHHHHHhhccC
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPV--KD---------RT--SFTGLVKL---VESTVRSESNRS 192 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G--~G---------~S--s~~~~~~d---l~~~l~~~~~~~ 192 (709)
.+..|+||++||+|++...+......+...+.++.+.-+- .| .. +.+++..+ +.++++.....+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~ 94 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEY 94 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHh
Confidence 4467899999999999999988666666666666552111 11 11 22333333 333444433444
Q ss_pred C--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhH
Q 005190 193 P--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 193 ~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (709)
+ ..+++++|+|-||.+++.+..++|+.++++|+..+........
T Consensus 95 gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~---------------------------------- 140 (207)
T COG0400 95 GIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL---------------------------------- 140 (207)
T ss_pred CCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc----------------------------------
Confidence 4 3799999999999999999999999999999998854421110
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
.-..-..|+++++|+.|+++|...
T Consensus 141 --------------------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~ 164 (207)
T COG0400 141 --------------------------------------------------------LPDLAGTPILLSHGTEDPVVPLAL 164 (207)
T ss_pred --------------------------------------------------------ccccCCCeEEEeccCcCCccCHHH
Confidence 001235799999999999999986
Q ss_pred HHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 351 EGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 351 ~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
+.++.+.+. +++.+.++ .||.+..|.-+...+.+..
T Consensus 165 -~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 165 -AEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred -HHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHHh
Confidence 777766443 67888888 7999988776666665553
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.6e-10 Score=110.96 Aligned_cols=100 Identities=18% Similarity=0.143 Sum_probs=72.3
Q ss_pred CCEEEEeCCCCCCcc---cHHHHHHHhc-CCceEEEEe----CCCCCCCCHHHHHHHHHHHHHHhhccC----CCCCEEE
Q 005190 132 SPLLLFLPGIDGVGL---GLIRQHQRLG-KIFDIWCLH----IPVKDRTSFTGLVKLVESTVRSESNRS----PKRPVYL 199 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~---~~~~~~~~L~-~~~~Vi~~D----l~G~G~Ss~~~~~~dl~~~l~~~~~~~----~~~~v~L 199 (709)
...|||+.|++.... ....+++.|. .+|.|+-+- +.|+|.++++.-++|+.+++++++... ..++|+|
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVL 112 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVL 112 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEE
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEE
Confidence 447999999977554 4667888885 689998885 678999999999999999999999873 4679999
Q ss_pred EEechhHHHHHHHHHhCC-----CceeEEEEecCCCC
Q 005190 200 VGESLGACIALAVAARNP-----DIDLVLILVNPATS 231 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P-----~~v~~lVl~~p~~~ 231 (709)
+|||.|+.-++.|+.... ..|.|+||-+|+..
T Consensus 113 mGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 113 MGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp EEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred EecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 999999999999998753 56999999988654
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.7e-11 Score=114.26 Aligned_cols=117 Identities=14% Similarity=0.001 Sum_probs=87.1
Q ss_pred CCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhc--ceEeeeccccccccccCCCCCCCChHHHHHHhcCcc
Q 005190 436 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESN--ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 513 (709)
Q Consensus 436 ~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~--~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~ 513 (709)
-+++++|.|+++.++++|+++||+++ +|.+++...+.+ .+ ..++++++..+++.|+ ++.++...|.++
T Consensus 10 ~~i~v~G~~~~~~~~~~iiv~NH~s~-~D~~~~~~~~~~-~~~~~~~~~v~K~~l~~~p~--------~g~~~~~~~~i~ 79 (193)
T cd07990 10 VKVVVYGDEPKLPKERALIISNHRSE-VDWLVLWMLADR-FGRLGRLKIVLKDSLKYPPL--------GGWGWQLGEFIF 79 (193)
T ss_pred eEEEEEecCccCCCccEEEEEcCCcc-cCHHHHHHHHHH-cCccceEEeeehhhhhcCCh--------hhHHHhhCeeEE
Confidence 46789999999778999999999976 688777666554 33 4788999999997643 666889999999
Q ss_pred ccHHH---------HHHHhcC---CCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeee
Q 005190 514 VSGIN---------LYKLMSS---KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 573 (709)
Q Consensus 514 v~~~~---------~~~~L~~---g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~ 573 (709)
++|+. ..+.+++ |..++|||||||.... + +..+.++|.+.|+|+++-.+
T Consensus 80 v~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~------~-----~~~~~~~a~k~~~p~l~~vL 140 (193)
T cd07990 80 LKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEE------K-----KERSQEFAEKNGLPPLKHVL 140 (193)
T ss_pred EECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHH------H-----HHHHHHHHHHcCCCCcceee
Confidence 99843 1223444 8999999999984322 1 12234788888888887666
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.3e-10 Score=116.28 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=77.9
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhc---cC--CCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN---RS--PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~---~~--~~~~v~Lv 200 (709)
+.|+||++||.+ ++...|..+...|+ .++.|+.+|+|......+....+|+.++++++.. .+ ...+++|+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 468999999976 56667888888885 4899999999988776665566666666655543 22 24689999
Q ss_pred EechhHHHHHHHHHhC------CCceeEEEEecCCCCc
Q 005190 201 GESLGACIALAVAARN------PDIDLVLILVNPATSF 232 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~------P~~v~~lVl~~p~~~~ 232 (709)
|+|+||.+|+.++... +..+.++|++.|....
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 9999999999998753 3578899999886553
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-09 Score=111.55 Aligned_cols=205 Identities=15% Similarity=0.063 Sum_probs=115.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCC-C--------------------C------HHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDR-T--------------------S------FTGLVKLVES 183 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~-S--------------------s------~~~~~~dl~~ 183 (709)
.-|.||.+||.++....+......-..|+-|+.+|.+|+|. + + +..+..|+..
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 46789999999999888877665557899999999999993 2 1 1335577777
Q ss_pred HHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhch-hhhHHhHHHhhh
Q 005190 184 TVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIP-GQITTMLSSTLS 260 (709)
Q Consensus 184 ~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 260 (709)
.++.+..+- +.+++.+.|.|+||.+++.+|+..|. |++++...|...-....+ .... ......+..++.
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~vP~l~d~~~~~-------~~~~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADVPFLCDFRRAL-------ELRADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEESESSSSHHHHH-------HHT--STTTHHHHHHHH
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecCCCccchhhhh-------hcCCccccHHHHHHHHh
Confidence 777776643 34789999999999999999999864 888888877544211111 0000 000000111111
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
...... +...++. +.+.. .+......+|+||+++-.|
T Consensus 234 ~~d~~~---------------~~~~~v~--------------------------~~L~Y--~D~~nfA~ri~~pvl~~~g 270 (320)
T PF05448_consen 234 WRDPHH---------------EREPEVF--------------------------ETLSY--FDAVNFARRIKCPVLFSVG 270 (320)
T ss_dssp HHSCTH---------------CHHHHHH--------------------------HHHHT--T-HHHHGGG--SEEEEEEE
T ss_pred ccCCCc---------------ccHHHHH--------------------------HHHhh--hhHHHHHHHcCCCEEEEEe
Confidence 000000 0000111 11111 1122344789999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccccC-hhhHHHHHh
Q 005190 341 GKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLED-GVDLVTIIK 387 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le~-p~~~~~~I~ 387 (709)
-.|.++|+.. .-.....++ ..++.+++..||....+. .++..+.|+
T Consensus 271 l~D~~cPP~t-~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~ 318 (320)
T PF05448_consen 271 LQDPVCPPST-QFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLK 318 (320)
T ss_dssp TT-SSS-HHH-HHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHH
T ss_pred cCCCCCCchh-HHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHh
Confidence 9999999996 666665555 689999999999877654 444444444
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-09 Score=113.57 Aligned_cols=191 Identities=15% Similarity=0.148 Sum_probs=104.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHH-HHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQH-QRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~-~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
..|+||++.|+.+....+..++ +.+ ..|+.++++|.||.|.| +.+.+.+.+.+.+...- ..+..+|.++|
T Consensus 189 p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p-~VD~~RV~~~G 267 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRP-WVDHTRVGAWG 267 (411)
T ss_dssp -EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHST-TEEEEEEEEEE
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCC-ccChhheEEEE
Confidence 4678999999998887766555 556 59999999999999998 22344444444444421 12346899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
.|+||.+|..+|..++++++++|..+++....-... ......|......+.. ..+.. .
T Consensus 268 ~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~----~~~~~~P~my~d~LA~----rlG~~----------~---- 325 (411)
T PF06500_consen 268 FSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP----EWQQRVPDMYLDVLAS----RLGMA----------A---- 325 (411)
T ss_dssp ETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H----HHHTTS-HHHHHHHHH----HCT-S----------C----
T ss_pred eccchHHHHHHHHhcccceeeEeeeCchHhhhhccH----HHHhcCCHHHHHHHHH----HhCCc----------c----
Confidence 999999999999999999999999988654221111 1122222211111110 00000 0
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhc--ccCCccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRL--HAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
.....+... +..+.-.....+ .+.++|+|.+.|++|++.|.++ ...++...
T Consensus 326 ~~~~~l~~e--------------------------l~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD-~~lia~~s 378 (411)
T PF06500_consen 326 VSDESLRGE--------------------------LNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIED-SRLIAESS 378 (411)
T ss_dssp E-HHHHHHH--------------------------GGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHH-HHHHHHTB
T ss_pred CCHHHHHHH--------------------------HHhcCcchhccccCCCCCcceEEeecCCCCCCCHHH-HHHHHhcC
Confidence 000000000 000000011233 5678999999999999999997 88888887
Q ss_pred CCcEEEEEcCCC
Q 005190 360 HKCEPRNFYGHG 371 (709)
Q Consensus 360 ~~~~~~~i~~aG 371 (709)
.+.+...++...
T Consensus 379 ~~gk~~~~~~~~ 390 (411)
T PF06500_consen 379 TDGKALRIPSKP 390 (411)
T ss_dssp TT-EEEEE-SSS
T ss_pred CCCceeecCCCc
Confidence 788888888654
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.12 E-value=9e-09 Score=104.63 Aligned_cols=99 Identities=25% Similarity=0.319 Sum_probs=83.3
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc----CCceEEEEeCCCCCCC-------------CHHHHHHHHHHHHHHhhccC--
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG----KIFDIWCLHIPVKDRT-------------SFTGLVKLVESTVRSESNRS-- 192 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~----~~~~Vi~~Dl~G~G~S-------------s~~~~~~dl~~~l~~~~~~~-- 192 (709)
.+.+||++|.+|-...|..+.+.|. ..+.|+++.+.||-.+ ++++.++...++++......
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 4579999999999999999888884 5799999999999544 55777777777777766544
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCC
Q 005190 193 PKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPAT 230 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P---~~v~~lVl~~p~~ 230 (709)
+..+++|+|||+|+.+++.+..+.+ ..|.+++++-|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 5789999999999999999999999 7789999998854
|
|
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.9e-10 Score=120.56 Aligned_cols=182 Identities=16% Similarity=0.185 Sum_probs=115.7
Q ss_pred CCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHH-------
Q 005190 445 GIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI------- 517 (709)
Q Consensus 445 ~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~------- 517 (709)
++..+.|+|+++||.++ +|.+++...++...-.+++..+...++. +.++.+++.+|++.+.|.
T Consensus 110 ~~~~~~pvIfvp~HrS~-lDylllsyvL~~~~l~~~~~~ag~nl~~---------~~lg~~lr~~GafFirRsf~~~~LY 179 (621)
T PRK11915 110 KLDRKATLAFAFSHRSY-LDGMLLPEVILANRLSPALTFGGANLNF---------FPMGAWAKRTGAIFIRRQTKDIPVY 179 (621)
T ss_pred HhccCCCEEEEeccccc-cHHHHHHHHHHHcCCCCceeehhhhhcc---------hhHHHHHHhCCcEEeccCCCCchHH
Confidence 35567899999999987 6998888876643334555555555543 337889999999988762
Q ss_pred ------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHH-------cCCcEEEeeeecchhhhhhhc
Q 005190 518 ------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATT-------FGAKIVPFGAVGEDDLAQIVL 584 (709)
Q Consensus 518 ------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~-------~~~pIvPv~~~G~~~~~~~~~ 584 (709)
.+..+|++|.++.+||||+|+ ...++. +.|.|...+.++ .+++||||+|.- +.++
T Consensus 180 ~~vl~eYi~~ll~~G~~le~F~EG~RS------RtGkll-~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~Y-----DrV~ 247 (621)
T PRK11915 180 RFVLRAYAAQLVQNHVNLTWSIEGGRT------RTGKLR-PPVFGILRYITDAVDEIDGPEVYLVPTSIVY-----DQLH 247 (621)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCCCCC------CCCCCC-CCchhhHHHHHHHHhcCCCCCeEEEEEEEee-----cccc
Confidence 245788999999999999994 445666 666666665444 479999999943 2222
Q ss_pred Cccc-------cccCc-cchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccc-----
Q 005190 585 DYND-------QMKIP-YFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRE----- 651 (709)
Q Consensus 585 ~~~~-------~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~----- 651 (709)
+... ..+-+ -+..+++.+. . +-..-|+++|.||+||...++-.+
T Consensus 248 E~~~y~~El~G~~K~~Esl~~l~~~~~----------------------~-l~~~~G~i~V~FgePisL~~~l~~~~~~~ 304 (621)
T PRK11915 248 EVEAMTTEAYGAVKRPEDLRFLVRLAR----------------------Q-QGERLGRAYLDFGEPLPLRKRLQELRADK 304 (621)
T ss_pred cHHHHHHHhcCCCCCccHHHHHHHHHH----------------------H-HhhcCceEEEECCCCccHHHHHhhhccCc
Confidence 2110 00001 0111111000 0 111248999999999998865111
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q 005190 652 LRDREKAHELYLEIKSEVEK 671 (709)
Q Consensus 652 ~~~~~~~~~~~~~v~~~i~~ 671 (709)
......++.+..+|+..|.+
T Consensus 305 ~~~~~~v~~La~~V~~~In~ 324 (621)
T PRK11915 305 SGTGSEIERIALDVEHRINR 324 (621)
T ss_pred ccchhHHHHHHHHHHHHHhh
Confidence 11245677777777777765
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.6e-09 Score=95.28 Aligned_cols=164 Identities=22% Similarity=0.258 Sum_probs=118.6
Q ss_pred CCCCEEEEeCCCC---C--CcccHHHHHHHh-cCCceEEEEeCCCCCCC--CH---HHHHHHHHHHHHHhhccCCCCCE-
Q 005190 130 RDSPLLLFLPGID---G--VGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---TGLVKLVESTVRSESNRSPKRPV- 197 (709)
Q Consensus 130 ~~~p~Vv~lHG~~---~--s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~---~~~~~dl~~~l~~~~~~~~~~~v- 197 (709)
+..|..|.+|--+ | +......++..| ..||.++.+|+||-|.| ++ ---.+|..+++++++++++..+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 4677788887542 2 223344566666 48999999999999999 33 33457888889999998887776
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhc
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (709)
.|.|+|+|++|++.+|.+.|+.- ..+.+.|....
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e~~-~~is~~p~~~~--------------------------------------------- 139 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPEIL-VFISILPPINA--------------------------------------------- 139 (210)
T ss_pred hhcccchHHHHHHHHHHhccccc-ceeeccCCCCc---------------------------------------------
Confidence 68889999999999999998754 23333331110
Q ss_pred cCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005190 278 LSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357 (709)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~ 357 (709)
+ +. ..+....+|.++|+|+.|.+++... .-++++
T Consensus 140 ----------~-df----------------------------------s~l~P~P~~~lvi~g~~Ddvv~l~~-~l~~~~ 173 (210)
T COG2945 140 ----------Y-DF----------------------------------SFLAPCPSPGLVIQGDADDVVDLVA-VLKWQE 173 (210)
T ss_pred ----------h-hh----------------------------------hhccCCCCCceeEecChhhhhcHHH-HHHhhc
Confidence 0 00 1124567899999999999999886 667776
Q ss_pred hcCCcEEEEEcCCCccccccChhhHHHHHh
Q 005190 358 ALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 358 ~~~~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
. ...++++++++.||.+- +-..+.+.|.
T Consensus 174 ~-~~~~~i~i~~a~HFF~g-Kl~~l~~~i~ 201 (210)
T COG2945 174 S-IKITVITIPGADHFFHG-KLIELRDTIA 201 (210)
T ss_pred C-CCCceEEecCCCceecc-cHHHHHHHHH
Confidence 5 46788999999999885 4556667776
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=8e-09 Score=118.81 Aligned_cols=119 Identities=14% Similarity=0.115 Sum_probs=81.9
Q ss_pred CCCC-CcccccccCCCCCCCCCEEEEeCCCCCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCC--CH---------HHH
Q 005190 113 GGGP-PRWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------TGL 177 (709)
Q Consensus 113 ~g~~-~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~---------~~~ 177 (709)
||.. +.|+.|..........|+||++||..+... .|......| .+||.|..++.||-|.= .| ...
T Consensus 425 DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~ 504 (686)
T PRK10115 425 DGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNT 504 (686)
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCc
Confidence 5655 335666543222234699999999877664 355555555 68999999999997543 11 122
Q ss_pred HHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 178 VKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+|+.+.++++.... ...++.+.|.|.||.++..++.++|++++++|...|...
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 344444444443322 357899999999999999999999999999998877444
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1e-08 Score=96.47 Aligned_cols=219 Identities=12% Similarity=0.115 Sum_probs=125.9
Q ss_pred EEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC----------CHHHHHH-HHHHHHHHhhccCCCCCEEEEEe
Q 005190 135 LLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT----------SFTGLVK-LVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 135 Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S----------s~~~~~~-dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
|+.-.+.+.....|+.++... ++||+|..+|+||.|.| ++.|++. |+.+.++.++...+..+.+.|||
T Consensus 33 ~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgH 112 (281)
T COG4757 33 LVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGH 112 (281)
T ss_pred EEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeec
Confidence 444444555556677788888 48999999999999998 5677774 89999999888888899999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhH------HHhhchhh---hHHhHHHhhhhhcCchhhhHHHH
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP------LLELIPGQ---ITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
|+||.+.-.+ .+++ +..+....+....+.. +..... ++...... +...++.. +.+..
T Consensus 113 S~GGqa~gL~-~~~~-k~~a~~vfG~gagwsg--~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~---l~G~G------- 178 (281)
T COG4757 113 SFGGQALGLL-GQHP-KYAAFAVFGSGAGWSG--WMGLRERLGAVLLWNLVGPPLTFWKGYMPKD---LLGLG------- 178 (281)
T ss_pred cccceeeccc-ccCc-ccceeeEecccccccc--chhhhhcccceeeccccccchhhccccCcHh---hcCCC-------
Confidence 9999876544 4455 4443443333332211 111100 00000000 00001111 11100
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 353 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~ 353 (709)
...+. . .+.+....... +. ..+.... .....+....+.+|++.+...+|+++|+.. .+
T Consensus 179 --~d~p~-~----v~RdW~RwcR~-p~--y~fddp~-----------~~~~~q~yaaVrtPi~~~~~~DD~w~P~As-~d 236 (281)
T COG4757 179 --SDLPG-T----VMRDWARWCRH-PR--YYFDDPA-----------MRNYRQVYAAVRTPITFSRALDDPWAPPAS-RD 236 (281)
T ss_pred --ccCcc-h----HHHHHHHHhcC-cc--ccccChh-----------HhHHHHHHHHhcCceeeeccCCCCcCCHHH-HH
Confidence 00000 0 01110000000 00 0000000 011224457789999999999999999997 99
Q ss_pred HHHhhcCCcEEEE--EcC----CCccccccCh-hhHHHHHhhc
Q 005190 354 RLSSALHKCEPRN--FYG----HGHFLLLEDG-VDLVTIIKGA 389 (709)
Q Consensus 354 ~l~~~~~~~~~~~--i~~----aGH~~~le~p-~~~~~~I~~~ 389 (709)
.+.+..+|+.+.. ++. .||+-..-+| |.+.+.+.+|
T Consensus 237 ~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 237 AFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred HHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 9999888765543 333 4999988887 7777777765
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=98.99 E-value=5e-09 Score=118.52 Aligned_cols=102 Identities=12% Similarity=-0.013 Sum_probs=81.4
Q ss_pred CCCEEEEeCCCCCCcc---cHH-HHHHHh-cCCceEEEEeCCCCCCC-----CH-HHHHHHHHHHHHHhhcc-CCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGL---GLI-RQHQRL-GKIFDIWCLHIPVKDRT-----SF-TGLVKLVESTVRSESNR-SPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~---~~~-~~~~~L-~~~~~Vi~~Dl~G~G~S-----s~-~~~~~dl~~~l~~~~~~-~~~~~v~ 198 (709)
..|+||++||++.+.. .+. .....| ++||.|+++|+||+|.| .+ .+.++|+.++++.+..+ ....++.
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v~ 100 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNVG 100 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCCCcEE
Confidence 4789999999987653 122 233445 68999999999999999 22 67788999999987654 2246899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
++|||+||.+++.+|..+|+.++++|..++....
T Consensus 101 ~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 101 MLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred EEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 9999999999999999999999999988775543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.8e-08 Score=102.31 Aligned_cols=238 Identities=13% Similarity=0.078 Sum_probs=140.8
Q ss_pred CCCEEEEeCCCCCCcccHHH-----HHHHh-cCCceEEEEeCCCCCCC----CHHHHH-HHHHHHHHHhhccCCCCCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIR-----QHQRL-GKIFDIWCLHIPVKDRT----SFTGLV-KLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~-----~~~~L-~~~~~Vi~~Dl~G~G~S----s~~~~~-~dl~~~l~~~~~~~~~~~v~L 199 (709)
..+++|++|-+--....|.. ++..| .+|..|+.+|+++-+.+ .++++. +.+...++.+.+..+.++|.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 45679999987665554432 44444 68999999999887776 889998 889999999988888899999
Q ss_pred EEechhHHHHHHHHHhCCCc-eeEEEEecCCCCcchhhhh-hhhH--HHhhchhhhH-------HhHHHhhhhhcCchhh
Q 005190 200 VGESLGACIALAVAARNPDI-DLVLILVNPATSFNKSVLQ-STIP--LLELIPGQIT-------TMLSSTLSLMTGDPLK 268 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~-v~~lVl~~p~~~~~~~~~~-~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 268 (709)
+|||.||.++..+++.++.+ |+.++++.+...+...... .... .+..+..... ..+...+..+..+.+.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndli 265 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLI 265 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccc
Confidence 99999999999999999888 9999887665544332111 0000 0111000000 0011111111111110
Q ss_pred --hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhH---------hhhhcccCCccEEE
Q 005190 269 --MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAY---------ANSRLHAVKAQMLV 337 (709)
Q Consensus 269 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~i~~PvLv 337 (709)
.....+.....+.. .+..+..... ..++...+.+.++.+-..... ..-.+.+|+||++.
T Consensus 266 w~~fV~nyl~ge~pl~-fdllyWn~ds---------t~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~ 335 (445)
T COG3243 266 WNYFVNNYLDGEQPLP-FDLLYWNADS---------TRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYN 335 (445)
T ss_pred hHHHHHHhcCCCCCCc-hhHHHhhCCC---------ccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEE
Confidence 00111111111110 1111211111 223444444444222111110 11267889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccCh
Q 005190 338 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p 379 (709)
+.|++|.++|.+. ....++.+++-...+.-++||....=+|
T Consensus 336 ~a~~~DhI~P~~S-v~~g~~l~~g~~~f~l~~sGHIa~vVN~ 376 (445)
T COG3243 336 LAAEEDHIAPWSS-VYLGARLLGGEVTFVLSRSGHIAGVVNP 376 (445)
T ss_pred EeecccccCCHHH-HHHHHHhcCCceEEEEecCceEEEEeCC
Confidence 9999999999996 8888888888444445568999876654
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.5e-08 Score=92.02 Aligned_cols=157 Identities=18% Similarity=0.191 Sum_probs=106.0
Q ss_pred CEEEEeCCCCCCcc-cHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005190 133 PLLLFLPGIDGVGL-GLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 133 p~Vv~lHG~~~s~~-~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~ 211 (709)
+.+|.+||+.+|+. .|....+.= .-.+-.+++..--.-..++|++.+.+.+.. . .++++||+||+|+.+++.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~--l~~a~rveq~~w~~P~~~dWi~~l~~~v~a----~-~~~~vlVAHSLGc~~v~h 75 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESA--LPNARRVEQDDWEAPVLDDWIARLEKEVNA----A-EGPVVLVAHSLGCATVAH 75 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhh--CccchhcccCCCCCCCHHHHHHHHHHHHhc----c-CCCeEEEEecccHHHHHH
Confidence 45899999988773 454433221 111333344333333778888888888776 3 456999999999999999
Q ss_pred HHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhH
Q 005190 212 VAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291 (709)
Q Consensus 212 ~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (709)
++......|.|++|++|+........ + ..+. .+
T Consensus 76 ~~~~~~~~V~GalLVAppd~~~~~~~----------~--------~~~~-------------------------tf---- 108 (181)
T COG3545 76 WAEHIQRQVAGALLVAPPDVSRPEIR----------P--------KHLM-------------------------TF---- 108 (181)
T ss_pred HHHhhhhccceEEEecCCCccccccc----------h--------hhcc-------------------------cc----
Confidence 99988789999999998543211000 0 0000 00
Q ss_pred HHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCC
Q 005190 292 VALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHG 371 (709)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aG 371 (709)
. ........-|.+++.+.+|++++.+. ++.+++.+ +..++.+.++|
T Consensus 109 --------------~------------------~~p~~~lpfps~vvaSrnDp~~~~~~-a~~~a~~w-gs~lv~~g~~G 154 (181)
T COG3545 109 --------------D------------------PIPREPLPFPSVVVASRNDPYVSYEH-AEDLANAW-GSALVDVGEGG 154 (181)
T ss_pred --------------C------------------CCccccCCCceeEEEecCCCCCCHHH-HHHHHHhc-cHhheeccccc
Confidence 0 01113445799999999999999997 99999988 47778888889
Q ss_pred cccccc
Q 005190 372 HFLLLE 377 (709)
Q Consensus 372 H~~~le 377 (709)
|+.-..
T Consensus 155 HiN~~s 160 (181)
T COG3545 155 HINAES 160 (181)
T ss_pred ccchhh
Confidence 976433
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-08 Score=99.84 Aligned_cols=155 Identities=17% Similarity=0.244 Sum_probs=119.4
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCC-CCC------------------CHHHHHHHHHHHHHHhhcc
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVK-DRT------------------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~-G~S------------------s~~~~~~dl~~~l~~~~~~ 191 (709)
.|.||++|++.|-.......++.|+ .||-|+++|+-+. |.+ +..+...|+.+.++.+..+
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 3899999999998899999999995 8999999998763 322 2257778888899888764
Q ss_pred C--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 192 S--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 192 ~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
. ...+|.++|+||||.+++.+|...| .+++.+..-+.......
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~---------------------------------- 151 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT---------------------------------- 151 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc----------------------------------
Confidence 4 3567999999999999999999888 67777765442210000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
....++++|+|+++|+.|..++..
T Consensus 152 --------------------------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~ 175 (236)
T COG0412 152 --------------------------------------------------------ADAPKIKVPVLLHLAGEDPYIPAA 175 (236)
T ss_pred --------------------------------------------------------cccccccCcEEEEecccCCCCChh
Confidence 002578999999999999999999
Q ss_pred HHHHHHHhhcC----CcEEEEEcCCCccccccC
Q 005190 350 EEGERLSSALH----KCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 350 ~~~~~l~~~~~----~~~~~~i~~aGH~~~le~ 378 (709)
. .+.+.+.+. ++++.+++++.|..+-+.
T Consensus 176 ~-~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 176 D-VDALAAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred H-HHHHHHHHHhcCCCeeEEEeCCCccccccCC
Confidence 6 666666433 578899999889888554
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.7e-09 Score=119.77 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=73.1
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC------------------------------CHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT------------------------------SFTGLV 178 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S------------------------------s~~~~~ 178 (709)
++.|+|||+||++++...|..+++.|. ++|+|+++|+||||.| .+.+.+
T Consensus 447 ~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 345789999999999999999999996 7899999999999988 236677
Q ss_pred HHHHHHHHHhh------cc------CCCCCEEEEEechhHHHHHHHHHh
Q 005190 179 KLVESTVRSES------NR------SPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 179 ~dl~~~l~~~~------~~------~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.|+..+...+. .. .+..+++++||||||.++..++..
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 78888877776 22 446799999999999999999975
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1e-08 Score=108.12 Aligned_cols=102 Identities=15% Similarity=0.226 Sum_probs=86.2
Q ss_pred CCCCEEEEeCCCCCCcccHHHH------HHHh-cCCceEEEEeCCCCCCC-----------------CHHHHHH-HHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQ------HQRL-GKIFDIWCLHIPVKDRT-----------------SFTGLVK-LVEST 184 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~------~~~L-~~~~~Vi~~Dl~G~G~S-----------------s~~~~~~-dl~~~ 184 (709)
..+|+|++.||+.+++..|-.. +-.| .+||+||.-..||.-.| ||.+++. |+-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 3588999999999999988763 2233 38999999999997655 6777764 89999
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCCC
Q 005190 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATS 231 (709)
Q Consensus 185 l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~ 231 (709)
++++....+..+++.+|||.|+.+...++...|+ +|+.+++++|+..
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 9999888888999999999999999999998876 5899999999773
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.2e-08 Score=102.06 Aligned_cols=243 Identities=12% Similarity=0.065 Sum_probs=136.1
Q ss_pred CEEEEeCCCCCCcccH-HHHHHHhcCCceEEEEeCCCCCC---C----CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005190 133 PLLLFLPGIDGVGLGL-IRQHQRLGKIFDIWCLHIPVKDR---T----SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~-~~~~~~L~~~~~Vi~~Dl~G~G~---S----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~ 204 (709)
|+||++.-+.+....+ +..++.|-.+++|+..|+.--+. + +++|+++-+.++++++ +. +++++|+|+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~GvCq 177 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIAVCQ 177 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEEEch
Confidence 6799998887655433 34667774599999999877662 2 8899998888888773 33 499999999
Q ss_pred hHHHHHHHHHhC-----CCceeEEEEecCCCCcchhh--hhhhhH------HHh----hchhh----hHHhHHHhhhhh-
Q 005190 205 GACIALAVAARN-----PDIDLVLILVNPATSFNKSV--LQSTIP------LLE----LIPGQ----ITTMLSSTLSLM- 262 (709)
Q Consensus 205 GG~iAl~~A~~~-----P~~v~~lVl~~p~~~~~~~~--~~~~~~------~~~----~~~~~----~~~~~~~~~~~~- 262 (709)
||..++.+++.. |+.++++++++++..+...+ ...+.. +.+ ..+.. .....|..+...
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~ 257 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAG 257 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHH
Confidence 999988777665 66799999988776655421 111110 010 01110 000111111100
Q ss_pred --cCchhh---hHHHHHhhc---cCC-chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHh---------
Q 005190 263 --TGDPLK---MAMDNVAKR---LSL-QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYA--------- 324 (709)
Q Consensus 263 --~~~~~~---~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 324 (709)
..++.. .....+.+. ... ......+++..... -.++.+.+...++.+-......
T Consensus 258 F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~--------~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~ 329 (406)
T TIGR01849 258 FISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAV--------MDMTAEFYLQTIDVVFQQFLLPQGKFIVEGK 329 (406)
T ss_pred HHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhc--------cCCcHHHHHHHHHHHHHhCCccCCcEEECCE
Confidence 001110 000000000 000 00111111111110 1123344433332221111100
Q ss_pred hhhcccCC-ccEEEEeeCCCCCCCcHHHHHHHHhhc---C--CcEEEEEcCCCccccccC---hhhHHHHHhhc
Q 005190 325 NSRLHAVK-AQMLVLCSGKDQLMPSQEEGERLSSAL---H--KCEPRNFYGHGHFLLLED---GVDLVTIIKGA 389 (709)
Q Consensus 325 ~~~l~~i~-~PvLvi~G~~D~~v~~~~~~~~l~~~~---~--~~~~~~i~~aGH~~~le~---p~~~~~~I~~~ 389 (709)
.-++.+|+ +|+|.+.|++|.++++.. +..+.+.+ + +.+.+..+++||.-.+-- .+++...|.+|
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~q-t~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~w 402 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQ-TKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREF 402 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHH-hHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHH
Confidence 12568898 999999999999999997 88888763 4 455777778999987763 34566666644
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.8e-08 Score=93.67 Aligned_cols=87 Identities=23% Similarity=0.288 Sum_probs=64.9
Q ss_pred EEEeCCCCCCcccHHH--HHHHhc---CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 135 LLFLPGIDGVGLGLIR--QHQRLG---KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 135 Vv~lHG~~~s~~~~~~--~~~~L~---~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
|+++||+.+++.+... +.+.++ ....+.++|++- +.++..+.+..+++. ...+.+.|+|.||||..|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~----~p~~a~~~l~~~i~~----~~~~~~~liGSSlGG~~A 73 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP----FPEEAIAQLEQLIEE----LKPENVVLIGSSLGGFYA 73 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc----CHHHHHHHHHHHHHh----CCCCCeEEEEEChHHHHH
Confidence 8999999999887664 344453 346788888875 455666677777766 444559999999999999
Q ss_pred HHHHHhCCCceeEEEEecCCCCc
Q 005190 210 LAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 210 l~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
..+|.+++ +. .||+||+..+
T Consensus 74 ~~La~~~~--~~-avLiNPav~p 93 (187)
T PF05728_consen 74 TYLAERYG--LP-AVLINPAVRP 93 (187)
T ss_pred HHHHHHhC--CC-EEEEcCCCCH
Confidence 99999885 33 2899997663
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.9e-08 Score=122.08 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=83.7
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG 206 (709)
+++++|+||++++...|..+...|...++|+++|++|+|.+ +++++++++.+.++.+ .+..+++++||||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~---~~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ---QPHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh---CCCCCEEEEEechhh
Confidence 46799999999999999999999998999999999999875 7889999988888763 234589999999999
Q ss_pred HHHHHHHHh---CCCceeEEEEecCCC
Q 005190 207 CIALAVAAR---NPDIDLVLILVNPAT 230 (709)
Q Consensus 207 ~iAl~~A~~---~P~~v~~lVl~~p~~ 230 (709)
.+|..+|.+ .++.+..++++++..
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999985 578899999988743
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-08 Score=98.48 Aligned_cols=98 Identities=20% Similarity=0.269 Sum_probs=74.2
Q ss_pred EEEeCCCCC---CcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc-----CCCCCEEEEEech
Q 005190 135 LLFLPGIDG---VGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-----SPKRPVYLVGESL 204 (709)
Q Consensus 135 Vv~lHG~~~---s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~-----~~~~~v~LvGhS~ 204 (709)
||++||.+- +......++..++ .++.|+.+|+|=....++.+..+|+.+.++++... .+.++++|+|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 799999753 3444555666663 68999999999887779999999999999998876 5567999999999
Q ss_pred hHHHHHHHHHhCCC----ceeEEEEecCCCCc
Q 005190 205 GACIALAVAARNPD----IDLVLILVNPATSF 232 (709)
Q Consensus 205 GG~iAl~~A~~~P~----~v~~lVl~~p~~~~ 232 (709)
||.+|+.++....+ .++++++++|....
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999975432 38999999995543
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.2e-08 Score=105.18 Aligned_cols=104 Identities=17% Similarity=0.100 Sum_probs=77.3
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHH-----------H-------hcCCceEEEEeCC-CCCCC---------CHHHHHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQ-----------R-------LGKIFDIWCLHIP-VKDRT---------SFTGLVKL 180 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~-----------~-------L~~~~~Vi~~Dl~-G~G~S---------s~~~~~~d 180 (709)
..+.|+||+++|.+|++..+..+.+ . +.+..+++.+|.| |+|.| +.++.++|
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 3468999999999988876544321 1 1244789999976 88888 34778888
Q ss_pred HHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHHhC----------CCceeEEEEecCCCCc
Q 005190 181 VESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN----------PDIDLVLILVNPATSF 232 (709)
Q Consensus 181 l~~~l~~~~~~~~---~~~v~LvGhS~GG~iAl~~A~~~----------P~~v~~lVl~~p~~~~ 232 (709)
+.+++..+..+.+ ..+++|+|||+||..+..+|..- .=.++|+++.++....
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 8888887655444 48999999999999998888752 1137899998886653
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-07 Score=89.79 Aligned_cols=232 Identities=16% Similarity=0.124 Sum_probs=115.0
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~-G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
...++||+.+|++.....|..++.+| ++||+|+-+|..-| |.| ++....+++..+++++. ..+..++-|+
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLI 106 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLI 106 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHH-HTT---EEEE
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhh
Confidence 34678999999999999999999999 58999999998877 777 66888899999999988 4567889999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh-HHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-PLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
+-|+.|-+|...|+.- .+.-+|.......+..+-..... .++.. ....+..+.
T Consensus 107 AaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~Dyl~~-----------~i~~lp~dl------------- 160 (294)
T PF02273_consen 107 AASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGYDYLQL-----------PIEQLPEDL------------- 160 (294)
T ss_dssp EETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-GGGS------------GGG--SEE-------------
T ss_pred hhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhccchhhc-----------chhhCCCcc-------------
Confidence 9999999999999854 36666665543332111100000 00000 000000000
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhH---hhhhcccCCccEEEEeeCCCCCCCcHHHHHHHH
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAY---ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLS 356 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~ 356 (709)
++ ....-+.-.+..++.+..+.. ....+..+.+|++...+++|.+|.... ...+.
T Consensus 161 ----------df-----------eGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~e-V~~~~ 218 (294)
T PF02273_consen 161 ----------DF-----------EGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSE-VEELL 218 (294)
T ss_dssp ----------EE-----------TTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHH-HHHHH
T ss_pred ----------cc-----------cccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHH-HHHHH
Confidence 00 000111112223333322211 224567789999999999999999996 77777
Q ss_pred hh--cCCcEEEEEcCCCccccccChhh---HHHHHhhcccccccCCCCCCcccCCCChHh
Q 005190 357 SA--LHKCEPRNFYGHGHFLLLEDGVD---LVTIIKGASYYRRGRNHDYVSDFMPPTSSE 411 (709)
Q Consensus 357 ~~--~~~~~~~~i~~aGH~~~le~p~~---~~~~I~~~~f~~r~~~~~~v~d~~~p~~~e 411 (709)
.. .+.+++..++|++|-+-. ++.. |.+.+.+...--..-..|...+.+.|+-+.
T Consensus 219 ~~~~s~~~klysl~Gs~HdL~e-nl~vlrnfy~svtkaaiald~~~~~l~~~~~ep~fe~ 277 (294)
T PF02273_consen 219 DNINSNKCKLYSLPGSSHDLGE-NLVVLRNFYQSVTKAAIALDSGSLDLDIDIIEPTFED 277 (294)
T ss_dssp TT-TT--EEEEEETT-SS-TTS-SHHHHHHHHHHHHHHHHHHHTT------------HHH
T ss_pred HhcCCCceeEEEecCccchhhh-ChHHHHHHHHHHHHHHHhhcCCceeeeccccCCCHHH
Confidence 73 346899999999998763 4432 333333322222344556666777666433
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.9e-08 Score=95.28 Aligned_cols=101 Identities=19% Similarity=0.160 Sum_probs=73.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhh----cc------CCCCCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSES----NR------SPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~----~~------~~~~~v~L 199 (709)
.-|+|||+||+......|..+.++++ .||-|+++|+...+..+-.+-.+++.++++++. .. .+..++.|
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 37899999999988888999999995 789999999655433322222222222222221 11 13468999
Q ss_pred EEechhHHHHHHHHHhC-----CCceeEEEEecCCCC
Q 005190 200 VGESLGACIALAVAARN-----PDIDLVLILVNPATS 231 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~-----P~~v~~lVl~~p~~~ 231 (709)
.|||-||-+|..++..+ +..++++|+++|+.+
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 99999999999999987 568999999999764
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.3e-08 Score=97.68 Aligned_cols=100 Identities=18% Similarity=0.246 Sum_probs=74.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc---------CCceEEEEeCCCCCCC----CHHHHHHHHHHHHHHhhccC-----
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---------KIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS----- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~---------~~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~~~~~~----- 192 (709)
++.+|||+||.+|+...++.+...+. ..++++++|+...... .+.+.++.+.+.++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 35679999999999888887766552 2488999998776422 45555666666666655544
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCC
Q 005190 193 PKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPAT 230 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P---~~v~~lVl~~p~~ 230 (709)
+.++++||||||||.+|-.++...+ +.|+.+|.++++.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 6789999999999999988776543 5699999887643
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-07 Score=93.67 Aligned_cols=227 Identities=15% Similarity=0.106 Sum_probs=128.9
Q ss_pred CCCEEEEeCCCCCCcccHHH--HHHHh-cCCceEEEEeCCCCCCC-----------CH-------HHHHHHHHHHHHHhh
Q 005190 131 DSPLLLFLPGIDGVGLGLIR--QHQRL-GKIFDIWCLHIPVKDRT-----------SF-------TGLVKLVESTVRSES 189 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~--~~~~L-~~~~~Vi~~Dl~G~G~S-----------s~-------~~~~~dl~~~l~~~~ 189 (709)
.+|.+|.++|.|......+. ++..| .+|+..+.+..|-||.- .. .....+...++.++.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 58888899998875544433 24555 67999999999999876 11 334455666777776
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
.+ +..++.+.|.||||.+|..+|+..|..+..+-++++...........+ .....+. .+... ..+....
T Consensus 171 ~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvl---s~~i~W~------~L~~q-~~~~~~~ 239 (348)
T PF09752_consen 171 RE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVL---SNSINWD------ALEKQ-FEDTVYE 239 (348)
T ss_pred hc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhh---hcCCCHH------HHHHH-hcccchh
Confidence 66 678999999999999999999999998875555655332111100000 0001100 00000 0000000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCC-----ccEEEEeeCCCC
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVK-----AQMLVLCSGKDQ 344 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-----~PvLvi~G~~D~ 344 (709)
.. ............... .. ......+....+...+... ..+.+.. -.+.++.+++|.
T Consensus 240 ~~---~~~~~~~~~~~~~~~--~~--------~~~~~~Ea~~~m~~~md~~-----T~l~nf~~P~dp~~ii~V~A~~Da 301 (348)
T PF09752_consen 240 EE---ISDIPAQNKSLPLDS--ME--------ERRRDREALRFMRGVMDSF-----THLTNFPVPVDPSAIIFVAAKNDA 301 (348)
T ss_pred hh---hcccccCcccccchh--hc--------cccchHHHHHHHHHHHHhh-----ccccccCCCCCCCcEEEEEecCce
Confidence 00 000000000000000 00 0001112222222222211 2223332 347899999999
Q ss_pred CCCcHHHHHHHHhhcCCcEEEEEcCCCccc-cccChhhHHHHHhh
Q 005190 345 LMPSQEEGERLSSALHKCEPRNFYGHGHFL-LLEDGVDLVTIIKG 388 (709)
Q Consensus 345 ~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~-~le~p~~~~~~I~~ 388 (709)
++|... ...|.+.+|++++..+++ ||.. ++-+.+.+.+.|.+
T Consensus 302 YVPr~~-v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 302 YVPRHG-VLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred Eechhh-cchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHH
Confidence 999986 889999999999999987 9985 55677888888874
|
|
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-08 Score=104.41 Aligned_cols=112 Identities=13% Similarity=-0.067 Sum_probs=76.8
Q ss_pred CceeeccCCCC---CCCCeEEEeccccchhhHHhhHHHHHHH-hcceEeeeccccccccccCCCCCCCChHHHHHHhcCc
Q 005190 437 GKIVRGLSGIP---SEGPVLFVGYHNLLGLDVLTLIPEFMIE-SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAV 512 (709)
Q Consensus 437 ~~~~~g~e~ip---~~~p~i~v~NH~~~~~d~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i 512 (709)
+++|+|.++.. .++++|+++||++. +|.+++.....+. .-...++++++.+...|+ +++.+..+|.|
T Consensus 68 kv~V~gd~~~~~~~g~e~~lIisNHqS~-~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv--------~Gw~~~~~~~I 138 (376)
T PLN02380 68 KVQLYADEETFELMGKEHALVISNHRSD-IDWLVGWILAQRSGCLGSALAVMKKSSKFLPV--------IGWSMWFSEYV 138 (376)
T ss_pred EEEEEecchhhccCCCCcEEEEECCChh-HHHHHHHHHhhhcccccceeEeeHHHhhhccH--------HHHHHHHcCCE
Confidence 56788865532 24589999999976 6987665554332 013467888888886643 67789999999
Q ss_pred cccHHH---------HHHHhcC---CCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcE
Q 005190 513 PVSGIN---------LYKLMSS---KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKI 568 (709)
Q Consensus 513 ~v~~~~---------~~~~L~~---g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pI 568 (709)
+++|+. +.+.+++ |..++|||||||.... ++ .-....|.+.|.|+
T Consensus 139 fIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~------k~-----~~s~~fA~~~glP~ 195 (376)
T PLN02380 139 FLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQA------KL-----LAAQEYAASRGLPV 195 (376)
T ss_pred EecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCch------hh-----HHHHHHHHHcCCCC
Confidence 999853 3345665 7889999999984221 11 12455677788777
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-08 Score=81.36 Aligned_cols=55 Identities=11% Similarity=0.186 Sum_probs=50.6
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVR 186 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~ 186 (709)
+.+|+++||++.++..|..+++.| .++|.|+++|+||||.| +++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 668999999999999999999999 58999999999999999 78999999988763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.5e-07 Score=89.23 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=73.6
Q ss_pred cccCCCCCCCCCEEEEeCCCCCCcccHHHH--HHHhc--CCceEEEEeCCCCC--CC--CH--------HHHHHHHHHHH
Q 005190 122 PLECGSHTRDSPLLLFLPGIDGVGLGLIRQ--HQRLG--KIFDIWCLHIPVKD--RT--SF--------TGLVKLVESTV 185 (709)
Q Consensus 122 ~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~--~~~L~--~~~~Vi~~Dl~G~G--~S--s~--------~~~~~dl~~~l 185 (709)
|...+.+....|+||++||.+++...+... ...++ .+|-|+.++..... .. .| .+-...+..++
T Consensus 6 YvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv 85 (220)
T PF10503_consen 6 YVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALV 85 (220)
T ss_pred ecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHH
Confidence 444444333578999999999998877652 23453 56778878754211 11 11 12234456666
Q ss_pred HHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 186 RSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 186 ~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
+++..++. ..+|++.|+|.||+++..++..+|+.+.++.+.+..
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 66555443 568999999999999999999999999988777653
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-07 Score=90.78 Aligned_cols=192 Identities=15% Similarity=0.080 Sum_probs=117.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------C-------------------HHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------S-------------------FTGLVKLVE 182 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s-------------------~~~~~~dl~ 182 (709)
.-|.||-.||+++....|..+...=..||.|+.+|.||.|.| + +.....|+.
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 378899999999999888776655568999999999999877 0 123445555
Q ss_pred HHHHHhhcc--CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhh
Q 005190 183 STVRSESNR--SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (709)
Q Consensus 183 ~~l~~~~~~--~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (709)
.+++.+... ...+++.+.|.|.||.+++.+|+..| ++++++++-|..+--.. .++.....-+..+...++
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-------~i~~~~~~~ydei~~y~k 233 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-------AIELATEGPYDEIQTYFK 233 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh-------heeecccCcHHHHHHHHH
Confidence 555554432 23578999999999999999888766 57777777664331111 011100000000000000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
. ..+.+ .+. +..+.. .+......++++|+|+..|
T Consensus 234 ~---------------h~~~e---~~v--------------------------~~TL~y--fD~~n~A~RiK~pvL~svg 267 (321)
T COG3458 234 R---------------HDPKE---AEV--------------------------FETLSY--FDIVNLAARIKVPVLMSVG 267 (321)
T ss_pred h---------------cCchH---HHH--------------------------HHHHhh--hhhhhHHHhhccceEEeec
Confidence 0 00000 000 000000 1112334779999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCcccccc
Q 005190 341 GKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLE 377 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le 377 (709)
--|.++||.. .-.....++ ..++.+++.-+|.-.-.
T Consensus 268 L~D~vcpPst-qFA~yN~l~~~K~i~iy~~~aHe~~p~ 304 (321)
T COG3458 268 LMDPVCPPST-QFAAYNALTTSKTIEIYPYFAHEGGPG 304 (321)
T ss_pred ccCCCCCChh-hHHHhhcccCCceEEEeeccccccCcc
Confidence 9999999996 555555555 56778888777765433
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.9e-07 Score=79.20 Aligned_cols=155 Identities=15% Similarity=0.069 Sum_probs=103.7
Q ss_pred EEEEeCCCCCCccc--HHHHHHHh-cCCceEEEEeCCCC-----CCC----CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 134 LLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVK-----DRT----SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~Dl~G~-----G~S----s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
+||+-||.+++.++ ....+..| .+|+.|.-++++-. |.. .-.++-......+.+++......+.++-|
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GG 95 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGG 95 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeecc
Confidence 79999999887764 55677788 48899999887643 211 11122222222233344445566899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||||-++.++|....-.|+++++++=+......+.
T Consensus 96 kSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe-------------------------------------------- 131 (213)
T COG3571 96 KSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE-------------------------------------------- 131 (213)
T ss_pred ccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc--------------------------------------------
Confidence 999999999999877666888988753222111110
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~ 361 (709)
+. -...|..+++|+|+.+|+.|.+-..+. ...+ ...+.
T Consensus 132 ----~~------------------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~-Va~y-~ls~~ 169 (213)
T COG3571 132 ----QL------------------------------------RTEHLTGLKTPTLITQGTRDEFGTRDE-VAGY-ALSDP 169 (213)
T ss_pred ----cc------------------------------------hhhhccCCCCCeEEeecccccccCHHH-HHhh-hcCCc
Confidence 00 014567789999999999999988775 4222 23456
Q ss_pred cEEEEEcCCCccc
Q 005190 362 CEPRNFYGHGHFL 374 (709)
Q Consensus 362 ~~~~~i~~aGH~~ 374 (709)
.+++.++++.|.+
T Consensus 170 iev~wl~~adHDL 182 (213)
T COG3571 170 IEVVWLEDADHDL 182 (213)
T ss_pred eEEEEeccCcccc
Confidence 8999999999976
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.2e-06 Score=90.07 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=76.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHH---H--------HhcCCceEEEEeCCCCCCC-----C-HHHHHHHHHHHHHHhhccC-
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQH---Q--------RLGKIFDIWCLHIPVKDRT-----S-FTGLVKLVESTVRSESNRS- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~---~--------~L~~~~~Vi~~Dl~G~G~S-----s-~~~~~~dl~~~l~~~~~~~- 192 (709)
.-|+||..|+++.+........ . ...+||.|+..|.||.|.| . ...-.+|..++|+.+..+-
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpw 98 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPW 98 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTT
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCC
Confidence 4678999999986542222211 1 3368999999999999999 3 5667888888888887652
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcch
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK 234 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~ 234 (709)
.+.+|-++|.|++|..++.+|+..|..+++++...+......
T Consensus 99 s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 99 SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 136899999999999999999988999999998877555433
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.3e-07 Score=91.21 Aligned_cols=158 Identities=17% Similarity=0.175 Sum_probs=83.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHh----cC-CceEEEEeCCCC-----CCC-----------------------C----H
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRL----GK-IFDIWCLHIPVK-----DRT-----------------------S----F 174 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L----~~-~~~Vi~~Dl~G~-----G~S-----------------------s----~ 174 (709)
++-||||||+++|+..|......| .+ .+.++.+|-|-- |-. . .
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 567999999999999988766555 45 788888774321 100 1 2
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC--------CCceeEEEEecCCCCcchhhhhhhhHHHhh
Q 005190 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPATSFNKSVLQSTIPLLEL 246 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~--------P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~ 246 (709)
..+.+.+..+.+.+....+ =.-|+|+|.||.+|..++... ...++-+|++++..+....
T Consensus 84 ~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~----------- 150 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD----------- 150 (212)
T ss_dssp ---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE------------
T ss_pred cCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-----------
Confidence 2233333333333333322 246999999999999888642 1236777777664331110
Q ss_pred chhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhh
Q 005190 247 IPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANS 326 (709)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (709)
....+
T Consensus 151 -------------------------------------~~~~~-------------------------------------- 155 (212)
T PF03959_consen 151 -------------------------------------YQELY-------------------------------------- 155 (212)
T ss_dssp -------------------------------------GTTTT--------------------------------------
T ss_pred -------------------------------------hhhhh--------------------------------------
Confidence 00000
Q ss_pred hcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC-cEEEEEcCCCccccccCh
Q 005190 327 RLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-CEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 327 ~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~-~~~~~i~~aGH~~~le~p 379 (709)
.-..|++|+|-|+|.+|.+++++. .+.+.+.+.+ .+++..+ +||.++....
T Consensus 156 ~~~~i~iPtlHv~G~~D~~~~~~~-s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 156 DEPKISIPTLHVIGENDPVVPPER-SEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp --TT---EEEEEEETT-SSS-HHH-HHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ccccCCCCeEEEEeCCCCCcchHH-HHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 014578999999999999999986 8888888777 7777776 5999987544
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2e-07 Score=92.72 Aligned_cols=96 Identities=24% Similarity=0.340 Sum_probs=81.1
Q ss_pred CEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 133 PLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
|+|+++|+.+|....|..+...|.....|+.++.||.+.- +++++++...+.|.. ..+..+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~---~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRR---VQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHH---hCCCCCEEEEeeccccH
Confidence 4699999999999999999999998899999999999733 667776666555554 45667999999999999
Q ss_pred HHHHHHHhC---CCceeEEEEecCCCC
Q 005190 208 IALAVAARN---PDIDLVLILVNPATS 231 (709)
Q Consensus 208 iAl~~A~~~---P~~v~~lVl~~p~~~ 231 (709)
+|..+|.+- .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999864 557999999999776
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.8e-07 Score=97.24 Aligned_cols=98 Identities=16% Similarity=0.189 Sum_probs=59.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------------C-------------H---------
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------------S-------------F--------- 174 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------------s-------------~--------- 174 (709)
.-|+|||-||++++...|..++..|+ +||-|+++|.|..-.+ . +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 47899999999999999999999995 8999999999854211 0 0
Q ss_pred ----HH---HHHHHHHHHHHhhc----------------------cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 005190 175 ----TG---LVKLVESTVRSESN----------------------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLIL 225 (709)
Q Consensus 175 ----~~---~~~dl~~~l~~~~~----------------------~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl 225 (709)
.+ =+.++..+++.+.. ++...++.++|||+||+.++.++... .+++..|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 01 12234444444331 11235799999999999999888776 66888899
Q ss_pred ecCC
Q 005190 226 VNPA 229 (709)
Q Consensus 226 ~~p~ 229 (709)
++++
T Consensus 258 LD~W 261 (379)
T PF03403_consen 258 LDPW 261 (379)
T ss_dssp ES--
T ss_pred eCCc
Confidence 9884
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=6.9e-07 Score=93.84 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=77.8
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHh--cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRL--GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L--~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~-----~~~~v~Lv 200 (709)
..|+||++||.+ ++..........+ ..++.|+.+|+|---+-.+....+|+.+.+..+.... ..++++++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~ 157 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVA 157 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEE
Confidence 578999999975 3344443444444 4899999999998777777777777777777766542 25789999
Q ss_pred EechhHHHHHHHHHhCCC----ceeEEEEecCCCCcch
Q 005190 201 GESLGACIALAVAARNPD----IDLVLILVNPATSFNK 234 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~~~~ 234 (709)
|+|.||.+++.++..-.+ ...+.+++.|......
T Consensus 158 GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 158 GDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 999999999999876543 3567888888766543
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.6e-06 Score=86.58 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=70.6
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc--CC--ceE--EEEeCCCC----CC-------------------CCHHHHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG--KI--FDI--WCLHIPVK----DR-------------------TSFTGLVKLVE 182 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~--~~--~~V--i~~Dl~G~----G~-------------------Ss~~~~~~dl~ 182 (709)
..+.||+||++++...+..++..+. ++ -.+ +-++--|+ |. .++...+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 3469999999999999999999985 22 222 23333332 11 14567888999
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCC
Q 005190 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATS 231 (709)
Q Consensus 183 ~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~-----~v~~lVl~~p~~~ 231 (709)
.++.+++.++..+++.+|||||||..++.++..+.. .+..+|.++.+..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 999999999999999999999999999999988632 3788888876443
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.6e-07 Score=84.40 Aligned_cols=150 Identities=17% Similarity=0.234 Sum_probs=109.3
Q ss_pred CEEEEeCCCCCCcc-cHHHHHHHhc-CCceEEEEeCC-CCCCC---------------CHHHHHHHHHHHHHHhhccCCC
Q 005190 133 PLLLFLPGIDGVGL-GLIRQHQRLG-KIFDIWCLHIP-VKDRT---------------SFTGLVKLVESTVRSESNRSPK 194 (709)
Q Consensus 133 p~Vv~lHG~~~s~~-~~~~~~~~L~-~~~~Vi~~Dl~-G~G~S---------------s~~~~~~dl~~~l~~~~~~~~~ 194 (709)
..||++--+-|... .-...+..++ +||.|+.+|+. |--.| +.+-.-.++..+++.++.....
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 35666665555444 3667778884 89999999964 42222 4455667788888888877768
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHH
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (709)
+++-++|.+|||.++..+.+..| .+.+++..-|....
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d------------------------------------------ 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD------------------------------------------ 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC------------------------------------------
Confidence 89999999999999988888877 56566655441110
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~ 354 (709)
.....++++|+|++.|+.|.++|+.. ...
T Consensus 157 --------------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~-v~~ 185 (242)
T KOG3043|consen 157 --------------------------------------------------SADIANVKAPILFLFAELDEDVPPKD-VKA 185 (242)
T ss_pred --------------------------------------------------hhHHhcCCCCEEEEeecccccCCHHH-HHH
Confidence 01236688999999999999999997 777
Q ss_pred HHhhcC-----CcEEEEEcCCCccccc
Q 005190 355 LSSALH-----KCEPRNFYGHGHFLLL 376 (709)
Q Consensus 355 l~~~~~-----~~~~~~i~~aGH~~~l 376 (709)
+.+.+. +.+++++++.+|..+.
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~~ 212 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFVA 212 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhhh
Confidence 777554 2469999999997663
|
|
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.1e-07 Score=92.00 Aligned_cols=165 Identities=13% Similarity=0.082 Sum_probs=102.0
Q ss_pred CCceeeccCCCCC----CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----H
Q 005190 436 NGKIVRGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 507 (709)
Q Consensus 436 ~~~~~~g~e~ip~----~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~ 507 (709)
.++++.|.|+++. ++|+|++++|.. .+|........ .+..+..++++.-... +-.++ .
T Consensus 95 ~~v~i~g~e~l~~a~~~g~gvI~~t~H~G-nwE~~~~~l~~---~~~~~~~v~~~~~n~~----------~~~~~~~~R~ 160 (298)
T PRK08419 95 NKVTFINEENLLDALKKKRPIIVTTAHYG-YWELFSLALAA---YYGAVSIVGRLLKSAP----------INEMISKRRE 160 (298)
T ss_pred CcEEEECHHHHHHHHHcCCCEEEEeeCcc-HHHHHHHHHHh---cCCCeEEEEeCCCChH----------HHHHHHHHHH
Confidence 3567899998874 789999999973 35776544332 2335666665544311 22222 2
Q ss_pred HhcCccccH----HHHHHHhcCCCeEEEecCchhhhhccCCccc---eeccCCChhHHHHHHHcCCcEEEeeeecchhhh
Q 005190 508 IMGAVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEY---KLFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 580 (709)
Q Consensus 508 ~~g~i~v~~----~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~---~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~ 580 (709)
..|.-.++. ..+.++|++|+.|+++|...-. ...|... .-.-....|.++||.++|+||||+++...
T Consensus 161 ~~g~~~i~~~~~~r~~l~~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~---- 234 (298)
T PRK08419 161 QFGIELIDKKGAMKELLKALKQGRALGILVDQNVV--PKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFND---- 234 (298)
T ss_pred HcCCeeEECccHHHHHHHHHHcCCeEEEEecCCCC--CCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEEC----
Confidence 344433322 4577889999999999944210 0001000 01114569999999999999999999431
Q ss_pred hhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHH
Q 005190 581 QIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 660 (709)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~~~~ 660 (709)
. ++++.+.|++||+++..+ +.++++.+
T Consensus 235 -------------------------------------------------~-~~~~~i~~~~~i~~~~~~---~~~~~~~~ 261 (298)
T PRK08419 235 -------------------------------------------------D-YSHFTITFFPPIRSKITD---DAEADILE 261 (298)
T ss_pred -------------------------------------------------C-CCeEEEEEcCCccCCCCC---ChHHHHHH
Confidence 0 346888899999876321 23455666
Q ss_pred HHHHHHHHHHHHH
Q 005190 661 LYLEIKSEVEKCL 673 (709)
Q Consensus 661 ~~~~v~~~i~~~~ 673 (709)
..+++.+.+++.+
T Consensus 262 ~~~~~~~~lE~~I 274 (298)
T PRK08419 262 ATQAQASACEEMI 274 (298)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666666
|
|
| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-06 Score=81.12 Aligned_cols=137 Identities=19% Similarity=0.269 Sum_probs=91.3
Q ss_pred CCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH---------
Q 005190 446 IPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG--------- 516 (709)
Q Consensus 446 ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~--------- 516 (709)
+-.++|+|+..=|.-+. +....++. ...++.|..+..= . -....++..+|..-|..
T Consensus 42 ~~~~~p~I~afWHg~l~----l~p~~~~~--~~~~~amvS~s~D-G--------EliA~~l~kfG~~~IRGSs~Kgg~~A 106 (214)
T COG2121 42 LANEKPGIVAFWHGQLA----LGPFAFPK--GKKIYAMVSPSRD-G--------ELIARLLEKFGLRVIRGSSNKGGISA 106 (214)
T ss_pred hhccCCeEEEEeccccc----cchhhccC--CCcEEEEEcCCcC-H--------HHHHHHHHHcCceEEeccCCcchHHH
Confidence 66689999999997331 22333333 3345555544331 1 11455788888766543
Q ss_pred -HHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhhcCccccccCccc
Q 005190 517 -INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYF 595 (709)
Q Consensus 517 -~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~~~ 595 (709)
.++.+.|++|.++.|-|+|-+ |..++. ..|.+-||.++|+||+|+.+.-.. .+. +
T Consensus 107 lr~l~k~Lk~G~~i~itpDgPk------Gp~~~~----~~Gii~LA~~sg~pi~pv~~~~sr---~~~-----------l 162 (214)
T COG2121 107 LRALLKALKQGKSIAITPDGPK------GPVHKI----GDGIIALAQKSGVPIIPVGVATSR---CWR-----------L 162 (214)
T ss_pred HHHHHHHHhCCCcEEEcCCCCC------CCceec----cchhhHhhHhcCCCeEEEEEeeee---eee-----------e
Confidence 236678999999999999976 333333 599999999999999999995322 111 1
Q ss_pred hHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccC
Q 005190 596 KSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETK 646 (709)
Q Consensus 596 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~ 646 (709)
+.|.+ -.+|+.-+++.+++|+||.+.
T Consensus 163 KsWDk-------------------------~~IP~PFgk~~i~~gePi~~~ 188 (214)
T COG2121 163 KTWDK-------------------------TIIPLPFGKIKIVLGEPIEVD 188 (214)
T ss_pred ccccc-------------------------ccccCccceeEEEecCceeec
Confidence 22222 125665689999999999987
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.2e-07 Score=83.21 Aligned_cols=98 Identities=18% Similarity=0.137 Sum_probs=82.7
Q ss_pred EEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 134 LLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
.+||+-|=+|....=..+++.| ++|+.|+.+|-+-|=.+ +-++.+.|+..++++...+.+.++++|+|+|+|+-+.-
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP 83 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLP 83 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHH
Confidence 5888888888776556688888 58999999998777555 88999999999999999988899999999999998888
Q ss_pred HHHHhCC----CceeEEEEecCCCC
Q 005190 211 AVAARNP----DIDLVLILVNPATS 231 (709)
Q Consensus 211 ~~A~~~P----~~v~~lVl~~p~~~ 231 (709)
....+.| ++|..++|++|...
T Consensus 84 ~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 84 FIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred HHHhhCCHHHHhheeEEEEeccCCc
Confidence 7777766 45889999988544
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.5e-07 Score=91.19 Aligned_cols=199 Identities=19% Similarity=0.138 Sum_probs=120.2
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCC--CCC-------------CHHHHHHHHHHHHHHhhcc---
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVK--DRT-------------SFTGLVKLVESTVRSESNR--- 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~--G~S-------------s~~~~~~dl~~~l~~~~~~--- 191 (709)
.-|+||+-||.+++...|..+++.++ .||-|.++|.+|- |.. -|-+-..|+..+++.+...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 47899999999999999999999995 7999999999994 222 1123344555555554433
Q ss_pred ------CCCCCEEEEEechhHHHHHHHHHhCCCceeE--------EEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHH
Q 005190 192 ------SPKRPVYLVGESLGACIALAVAARNPDIDLV--------LILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS 257 (709)
Q Consensus 192 ------~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~--------lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (709)
....+|.++|||+||..++.++....+.... .+...+... +. . .+.. . ...
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~-~~-~------~l~q-~------~av 214 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGL-NG-R------LLNQ-C------AAV 214 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCc-Ch-h------hhcc-c------ccc
Confidence 3457899999999999999998765543211 111111000 00 0 0000 0 000
Q ss_pred hhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEE
Q 005190 258 TLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLV 337 (709)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 337 (709)
.+... ..-..|... .......+... ...-...+.+++.|+++
T Consensus 215 ~~~~~----------------------~~~~rDpri-----ravvA~~p~~~-----------~~Fg~tgl~~v~~P~~~ 256 (365)
T COG4188 215 WLPRQ----------------------AYDLRDPRI-----RAVVAINPALG-----------MIFGTTGLVKVTDPVLL 256 (365)
T ss_pred ccchh----------------------hhccccccc-----eeeeeccCCcc-----------cccccccceeeecceee
Confidence 00000 000000000 00000000000 00112556889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcCCc--EEEEEcCCCccccccChhhH
Q 005190 338 LCSGKDQLMPSQEEGERLSSALHKC--EPRNFYGHGHFLLLEDGVDL 382 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~~~--~~~~i~~aGH~~~le~p~~~ 382 (709)
+.|..|.+.|...........+++. -+..++++.|+-++|-+.+.
T Consensus 257 ~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 257 AAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 9999999888876566667778776 67889999999999988776
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.5e-06 Score=77.88 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=44.8
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHh
Q 005190 329 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 329 ~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
..+++|.|-|.|+.|.+++... .+.|++.+++..+..-+ +||+++-.+ ...+-|.
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~-s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~ 214 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSER-SEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIA 214 (230)
T ss_pred cCCCCCeeEEecccceeecchH-HHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHH
Confidence 5689999999999999999997 99999999999655555 599999665 3444444
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.5e-07 Score=88.43 Aligned_cols=49 Identities=27% Similarity=0.523 Sum_probs=30.4
Q ss_pred hcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC------CcEEEEEcCCCcccc
Q 005190 327 RLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFYGHGHFLL 375 (709)
Q Consensus 327 ~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~------~~~~~~i~~aGH~~~ 375 (709)
.+.++++|+|+|.|++|.+.|....++.+.+++. +.+++.++++||++.
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceec
Confidence 3577899999999999999998875655554322 468888999999985
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.5e-07 Score=82.76 Aligned_cols=182 Identities=14% Similarity=0.165 Sum_probs=113.5
Q ss_pred CCCCCEEEEeCCCC---CC-cccHHHHHHHhcCCceEEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCC-CCEEEEEe
Q 005190 129 TRDSPLLLFLPGID---GV-GLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPK-RPVYLVGE 202 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~---~s-~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~-~~v~LvGh 202 (709)
....+.+||+||.. ++ ..+.......+..+|+|..+++--+-.- ++++...++...++.+....++ +.+.+-||
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGH 143 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGH 143 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEccc
Confidence 34578999999952 22 3345556667788999998865333222 6677777777777766665655 44667789
Q ss_pred chhHHHHHHHHHh-CCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 203 SLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 203 S~GG~iAl~~A~~-~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|.|+.+|+.+..+ +..+|.|+++.+......+ +.....+..+... .
T Consensus 144 SaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E-----------------------L~~te~g~dlgLt---------~- 190 (270)
T KOG4627|consen 144 SAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE-----------------------LSNTESGNDLGLT---------E- 190 (270)
T ss_pred chHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH-----------------------HhCCccccccCcc---------c-
Confidence 9999999887765 3456777877665322100 0000000000000 0
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~ 361 (709)
...+. .+.+ ...+..++.|+|++.|++|.-.-.+. .+.++.....
T Consensus 191 ~~ae~------------------~Scd----------------l~~~~~v~~~ilVv~~~~espklieQ-nrdf~~q~~~ 235 (270)
T KOG4627|consen 191 RNAES------------------VSCD----------------LWEYTDVTVWILVVAAEHESPKLIEQ-NRDFADQLRK 235 (270)
T ss_pred chhhh------------------cCcc----------------HHHhcCceeeeeEeeecccCcHHHHh-hhhHHHHhhh
Confidence 00000 0110 12346788999999999997766665 7778887788
Q ss_pred cEEEEEcCCCccccccC
Q 005190 362 CEPRNFYGHGHFLLLED 378 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~ 378 (709)
+.+..+++.+|+-.+++
T Consensus 236 a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 236 ASFTLFKNYDHYDIIEE 252 (270)
T ss_pred cceeecCCcchhhHHHH
Confidence 99999999999976653
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.2e-06 Score=81.23 Aligned_cols=91 Identities=26% Similarity=0.241 Sum_probs=69.4
Q ss_pred EeCCCC--CCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 137 FLPGID--GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 137 ~lHG~~--~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
++|+.+ ++...|..+...+...+.|+++|.+|++.+ +.+++++.....+.. ..+..+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLR---AAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCCeEEEEECHHHHHH
Confidence 455544 667789999999988899999999999876 556666554444432 3446789999999999999
Q ss_pred HHHHHh---CCCceeEEEEecCCC
Q 005190 210 LAVAAR---NPDIDLVLILVNPAT 230 (709)
Q Consensus 210 l~~A~~---~P~~v~~lVl~~p~~ 230 (709)
..+|.. .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 988886 356788899887744
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.7e-06 Score=78.36 Aligned_cols=169 Identities=19% Similarity=0.222 Sum_probs=111.9
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------------------------CHHHHHHHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------------------------SFTGLVKLVESTV 185 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------------------------s~~~~~~dl~~~l 185 (709)
..+||++||.+.++..|..+++.+. ++...+++..|-.-.+ ++...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 3479999999999999998888774 4555555533322111 3455555666666
Q ss_pred HHhhccC-CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcC
Q 005190 186 RSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 186 ~~~~~~~-~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (709)
++..+.. +..++.+-|.|+||++|+..+..+|..+.+++-..+..+..... ++ .+
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~----------~~--------~~------ 138 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG----------LP--------GW------ 138 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh----------cc--------CC------
Confidence 6644422 34678999999999999999999988887777654422210000 00 00
Q ss_pred chhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCC
Q 005190 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
. .. .+ ..|++..||+.|+
T Consensus 139 --------------------------------------------~----------------~~-~~-~~~i~~~Hg~~d~ 156 (206)
T KOG2112|consen 139 --------------------------------------------L----------------PG-VN-YTPILLCHGTADP 156 (206)
T ss_pred --------------------------------------------c----------------cc-cC-cchhheecccCCc
Confidence 0 00 01 5799999999999
Q ss_pred CCCcHHHHHHHHh----hcCCcEEEEEcCCCccccccChhhHHHHHh
Q 005190 345 LMPSQEEGERLSS----ALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 345 ~v~~~~~~~~l~~----~~~~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
+||... .+.-.+ ....++++.+++.+|...-+.-+++...|.
T Consensus 157 ~vp~~~-g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 157 LVPFRF-GEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eeehHH-HHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 999875 554444 333588899999999988666555555554
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.1e-05 Score=83.37 Aligned_cols=85 Identities=18% Similarity=0.242 Sum_probs=66.3
Q ss_pred HHHHHhcCCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCC-CEEEEEechhHHHHHHHHHhCCCceeEEEEe
Q 005190 150 RQHQRLGKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKR-PVYLVGESLGACIALAVAARNPDIDLVLILV 226 (709)
Q Consensus 150 ~~~~~L~~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~-~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~ 226 (709)
.+-..|..|+.||.+...-.-.- ++++.......+++.+...++.. +.+|+|.+.||..++.+|+.+|+.+.-+|+.
T Consensus 92 evG~AL~~GHPvYFV~F~p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvla 171 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFFPEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLA 171 (581)
T ss_pred HHHHHHHcCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeec
Confidence 36677878888877754322111 88888888888888888888754 8999999999999999999999999888887
Q ss_pred cCCCCcch
Q 005190 227 NPATSFNK 234 (709)
Q Consensus 227 ~p~~~~~~ 234 (709)
+.+.++..
T Consensus 172 GaPlsywa 179 (581)
T PF11339_consen 172 GAPLSYWA 179 (581)
T ss_pred CCCccccc
Confidence 66555433
|
Their function is unknown. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.6e-05 Score=73.74 Aligned_cols=234 Identities=12% Similarity=0.148 Sum_probs=129.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc----CCceEEEEeCCCCCCC----------------CHHHHHHHHHHHHHHhhc
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG----KIFDIWCLHIPVKDRT----------------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~----~~~~Vi~~Dl~G~G~S----------------s~~~~~~dl~~~l~~~~~ 190 (709)
+.+.+++++|.+|....|..++..|- +...+|.+-..||-.- ++++.++--.++++...
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~- 106 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV- 106 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC-
Confidence 67889999999999999999888873 3466999988888532 45666666556665522
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCC--CceeEEEEecCCCC-cchhhhhhhh-HHHhhchhh-------hHHhHHHhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNP--DIDLVLILVNPATS-FNKSVLQSTI-PLLELIPGQ-------ITTMLSSTL 259 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P--~~v~~lVl~~p~~~-~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~ 259 (709)
-.+.+++++|||.|+.+.+.+..... -.|.+++++-|..- ..+++..... ..+..++.. .....|.+.
T Consensus 107 -Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 107 -PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred -CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 22578999999999999999887432 23777777755221 1111110000 011111100 001111111
Q ss_pred hhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHH----HHhhhHhhhhcccCCccE
Q 005190 260 SLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELL----KAASAYANSRLHAVKAQM 335 (709)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~~Pv 335 (709)
+.+.-... ......+++ +.... .....+..+.....+. ........+.+.+-.+-+
T Consensus 186 r~~Li~~~------l~~~n~p~e----~l~ta----------l~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l 245 (301)
T KOG3975|consen 186 RFILIKFM------LCGSNGPQE----FLSTA----------LFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSL 245 (301)
T ss_pred HHHHHHHh------cccCCCcHH----HHhhH----------HHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEE
Confidence 11100000 000000001 11000 0001111111111111 111111123334446788
Q ss_pred EEEeeCCCCCCCcHHHHHHHHhhcCCcEEEE-EcCCCccccccChhhHHHHHh
Q 005190 336 LVLCSGKDQLMPSQEEGERLSSALHKCEPRN-FYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 336 Lvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~-i~~aGH~~~le~p~~~~~~I~ 387 (709)
.+.+|.+|.++|.+. .+.+.+.+|..++.. .+++-|.......+..+..+.
T Consensus 246 ~Fyygt~DgW~p~~~-~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~ 297 (301)
T KOG3975|consen 246 WFYYGTNDGWVPSHY-YDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVF 297 (301)
T ss_pred EEEccCCCCCcchHH-HHHHhhhcchhceeeccccCCcceeecccHHHHHHHH
Confidence 999999999999997 999999998544433 278899999988888888776
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.1e-05 Score=93.79 Aligned_cols=81 Identities=12% Similarity=0.041 Sum_probs=64.5
Q ss_pred HHHHh-cCCceEEEEeCCCCCCC-----CH-HHHHHHHHHHHHHhhccC----------------CCCCEEEEEechhHH
Q 005190 151 QHQRL-GKIFDIWCLHIPVKDRT-----SF-TGLVKLVESTVRSESNRS----------------PKRPVYLVGESLGAC 207 (709)
Q Consensus 151 ~~~~L-~~~~~Vi~~Dl~G~G~S-----s~-~~~~~dl~~~l~~~~~~~----------------~~~~v~LvGhS~GG~ 207 (709)
+...+ .+||.|+..|.||+|.| .+ .+-.+|..++|+.+..+. ...+|.++|.|+||.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 33445 58999999999999999 22 555678888888876321 146999999999999
Q ss_pred HHHHHHHhCCCceeEEEEecCCCC
Q 005190 208 IALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 208 iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+++.+|+..|..++++|..++...
T Consensus 351 ~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 351 LPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHhhCCCcceEEEeeCCCCc
Confidence 999999999999999998776544
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.6e-06 Score=82.28 Aligned_cols=109 Identities=19% Similarity=0.171 Sum_probs=78.7
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc--------
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-------- 191 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~-------- 191 (709)
.+.+.|. -|+|+|+||+.-....|..+..+++ .||-|+++++-.--.-+-.+-+++..++++++...
T Consensus 39 tP~~~G~----yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 39 TPSEAGT----YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred cCCcCCC----ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 4445554 7899999999999999999999994 78999999986432222233333444444443321
Q ss_pred --CCCCCEEEEEechhHHHHHHHHHhCC-C-ceeEEEEecCCCCcc
Q 005190 192 --SPKRPVYLVGESLGACIALAVAARNP-D-IDLVLILVNPATSFN 233 (709)
Q Consensus 192 --~~~~~v~LvGhS~GG~iAl~~A~~~P-~-~v~~lVl~~p~~~~~ 233 (709)
....++.++|||.||-.|.++|..+. + .+++||.++|+.+..
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 12468999999999999999999873 2 388899999987754
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-06 Score=84.99 Aligned_cols=82 Identities=15% Similarity=0.138 Sum_probs=57.0
Q ss_pred EEEEeCCCCC-CcccHHHHHHHh-cCCce---EEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 134 LLLFLPGIDG-VGLGLIRQHQRL-GKIFD---IWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 134 ~Vv~lHG~~~-s~~~~~~~~~~L-~~~~~---Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
+|||+||.++ ....|..+.+.| ++||. |+++++-....+. ..+.++.+.++++.++..-+. +|.|||
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 4999999998 568999999999 58888 8999985554421 123446788888888877777 999999
Q ss_pred echhHHHHHHHHHhC
Q 005190 202 ESLGACIALAVAARN 216 (709)
Q Consensus 202 hS~GG~iAl~~A~~~ 216 (709)
|||||.++-.+....
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999998887644
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.5e-05 Score=79.16 Aligned_cols=114 Identities=17% Similarity=0.111 Sum_probs=80.2
Q ss_pred cccCCCCC-CCCCEEEEeCCCCC-----CcccHHHHHHHhc--CCceEEEEeCCCCCCC----CHHHHHHHHHHHHHH--
Q 005190 122 PLECGSHT-RDSPLLLFLPGIDG-----VGLGLIRQHQRLG--KIFDIWCLHIPVKDRT----SFTGLVKLVESTVRS-- 187 (709)
Q Consensus 122 ~~~~g~p~-~~~p~Vv~lHG~~~-----s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~-- 187 (709)
|.....+. ...|.|||+||.|- ....|..+...++ -+.-|+.+|+|=--+. .++|-.+.+..+.++
T Consensus 79 y~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~ 158 (336)
T KOG1515|consen 79 YRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSW 158 (336)
T ss_pred EcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHH
Confidence 44443333 56889999999753 2446777888874 5688889999876666 445555555555553
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhC------CCceeEEEEecCCCCcchh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARN------PDIDLVLILVNPATSFNKS 235 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~------P~~v~~lVl~~p~~~~~~~ 235 (709)
+....+.++++|+|-|.||.+|..+|.+. +-.++|.|++.|.......
T Consensus 159 ~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 159 LKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred HHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 33334567899999999999999988753 3568999999997765443
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-06 Score=89.87 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCEEEEeCCCCCCc--ccHHH-HHHHh-c---CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc--cCCC
Q 005190 131 DSPLLLFLPGIDGVG--LGLIR-QHQRL-G---KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN--RSPK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~--~~~~~-~~~~L-~---~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~--~~~~ 194 (709)
+.|++|++|||.++. ..|.. +.+.+ . ..++|+++|+-..-.. ......+.+..+|..+.. ..+.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 688999999998887 34554 44434 3 4799999999543222 224455556666666552 2346
Q ss_pred CCEEEEEechhHHHHHHHHHhCCC--ceeEEEEecCCCCc
Q 005190 195 RPVYLVGESLGACIALAVAARNPD--IDLVLILVNPATSF 232 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~--~v~~lVl~~p~~~~ 232 (709)
++++|||||+||.+|-.++..... .+..++.++|+.+.
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 789999999999999999988877 89999999997764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.7e-05 Score=71.08 Aligned_cols=90 Identities=16% Similarity=0.085 Sum_probs=54.9
Q ss_pred EEEeCCCCCCccc--HHH-HHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005190 135 LLFLPGIDGVGLG--LIR-QHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 135 Vv~lHG~~~s~~~--~~~-~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~ 211 (709)
||++||+.+|+.+ ... ....+....+++ +++. . +-.+-.+.+...+..+......+++.|||+|+||+.|..
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~~--~-~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~ 76 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYST--L-HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAER 76 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECCC--C-CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHH
Confidence 7999999999887 432 112232334444 4441 1 222223334444432111111257999999999999999
Q ss_pred HHHhCCCceeEEEEecCCCCc
Q 005190 212 VAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 212 ~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+|.++. + ..||+||+...
T Consensus 77 La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 77 IGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHC--C-CEEEECCCCCh
Confidence 999976 3 47889997653
|
|
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.9e-06 Score=84.85 Aligned_cols=160 Identities=16% Similarity=0.143 Sum_probs=100.1
Q ss_pred Ccee--eccCCCCC----CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccc----cccccccCCCCCCCChHHHH
Q 005190 437 GKIV--RGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHP----MMYFKSKEGGLSDLSPYDVM 506 (709)
Q Consensus 437 ~~~~--~g~e~ip~----~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~----~~~~~~~~~~~p~~~~~~~~ 506 (709)
.+++ +|.|++.. ++++|+++.|.. .||....... ..+.++..++.+ .++.. +...-
T Consensus 89 ~v~i~~~g~e~l~~a~~~gkgvIllt~H~G-nwE~~~~~l~---~~~~~~~~vyr~~~n~~~~~~----------~~~~R 154 (298)
T PRK07920 89 RVRVSIEGLEHLDAALAAGRGVVLALPHSG-NWDMAGAWLV---QHHGPFTTVAERLKPESLYER----------FVAYR 154 (298)
T ss_pred hhhhccCCHHHHHHHHhcCCCeEEEecCCC-HHHHHHHHHH---HcCCCeEEEEeccCCHHHHHH----------HHHHH
Confidence 3456 78887763 579999999963 3577543322 234455555543 23321 22233
Q ss_pred HHhc--CccccH------HHHHHHhcCCCeEEEecCchhhhhccCCcccee---ccCCChhHHHHHHHcCCcEEEeeeec
Q 005190 507 RIMG--AVPVSG------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKL---FWPESSEFVRMATTFGAKIVPFGAVG 575 (709)
Q Consensus 507 ~~~g--~i~v~~------~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l---~~~~k~G~~~lA~~~~~pIvPv~~~G 575 (709)
...| .++.+. ..+.++|++|+.|+|.|..... ..+..... .-...+|.++||.++|+||||+++.-
T Consensus 155 ~~~g~~~i~~~~~~~~~~r~ii~~Lk~g~~v~il~Dq~~~---~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r 231 (298)
T PRK07920 155 ESLGFEVLPLTGGERPPFEVLAERLRAGGVVCLLADRDLT---RSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWF 231 (298)
T ss_pred HhcCCEEEecCCCCchHHHHHHHHHHcCCeEEEEeccCcc---CCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEE
Confidence 4556 344332 3367889999999999988642 11111111 11456899999999999999999942
Q ss_pred chhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCH
Q 005190 576 EDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR 655 (709)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~ 655 (709)
. +....+.|.+|++.. .+
T Consensus 232 ~-------------------------------------------------------~~~y~v~~~~~~~~~-------~~ 249 (298)
T PRK07920 232 E-------------------------------------------------------GDGWGFRVHPPLDVP-------SA 249 (298)
T ss_pred e-------------------------------------------------------CCeEEEEEeCCCCCC-------ch
Confidence 1 112778889998764 24
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 005190 656 EKAHELYLEIKSEVEKCLAY 675 (709)
Q Consensus 656 ~~~~~~~~~v~~~i~~~~~~ 675 (709)
++..++.+++.+.+|+.+.+
T Consensus 250 ~~~~~~t~~~~~~lE~~Ir~ 269 (298)
T PRK07920 250 EDVAAMTQALADAFAANIAA 269 (298)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 56677777777777777643
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.6e-06 Score=92.00 Aligned_cols=89 Identities=9% Similarity=-0.033 Sum_probs=72.1
Q ss_pred CCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC
Q 005190 143 GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (709)
Q Consensus 143 ~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P 217 (709)
.....|..+++.|.+...+...|++|+|.+ ..++..+++.++++.+....+.++++|+||||||.++..++..+|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 456789999999964334558999999987 356777888888888777777889999999999999999999888
Q ss_pred Cc----eeEEEEecCCCC
Q 005190 218 DI----DLVLILVNPATS 231 (709)
Q Consensus 218 ~~----v~~lVl~~p~~~ 231 (709)
+. |+++|.++++..
T Consensus 185 ~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HhHHhHhccEEEECCCCC
Confidence 64 788888877544
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.1e-05 Score=78.27 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=71.5
Q ss_pred CCCEEEEeCCCCCCcccHHH----HHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIR----QHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~----~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
++..+||+||+..+...-.. +...+.-...++.+.+|+.|.- +...-...+..++..+....+.++|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 46689999999887654333 2223322348999999998865 23444556777777766666788999
Q ss_pred EEEechhHHHHHHHHHh----CC-----CceeEEEEecCCCC
Q 005190 199 LVGESLGACIALAVAAR----NP-----DIDLVLILVNPATS 231 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~----~P-----~~v~~lVl~~p~~~ 231 (709)
|++||||+.+.+.+... .+ ..+..+||++|-..
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999999887654 12 25778899888544
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00022 Score=73.60 Aligned_cols=80 Identities=20% Similarity=0.122 Sum_probs=54.0
Q ss_pred HHHHhcCCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccC------CCCCEEEEEechhHHHHHHHHHhC----CC
Q 005190 151 QHQRLGKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRS------PKRPVYLVGESLGACIALAVAARN----PD 218 (709)
Q Consensus 151 ~~~~L~~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~------~~~~v~LvGhS~GG~iAl~~A~~~----P~ 218 (709)
+...|++||.|+++|+.|.|.. .-...+..+.+.++..+... ...++.++|||-||.-++..|... ||
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 4556689999999999999875 22444455555555544322 246899999999999887666432 55
Q ss_pred c---eeEEEEecCCC
Q 005190 219 I---DLVLILVNPAT 230 (709)
Q Consensus 219 ~---v~~lVl~~p~~ 230 (709)
. +.|.++.+++.
T Consensus 99 L~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPA 113 (290)
T ss_pred cccceeEEeccCCcc
Confidence 5 56666655543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG3176 Putative hemolysin [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.7e-06 Score=84.85 Aligned_cols=147 Identities=14% Similarity=0.074 Sum_probs=98.3
Q ss_pred eeeccCCceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccc-cccC--CCCCCCChHHHHH
Q 005190 431 LSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYF-KSKE--GGLSDLSPYDVMR 507 (709)
Q Consensus 431 ~~~~~~~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~--~~~p~~~~~~~~~ 507 (709)
...++.++...+.+.+|.+++++.|||| ++-.|.+. ............|.+++...-+ +++- ..++. .+.+-.+
T Consensus 61 ~~el~~~l~~~~~~~~~d~d~fd~VcnH-lgv~Dg~~-~~d~~~~~vgtyR~l~~~~A~r~~~~ys~~ef~v-~~~~~~~ 137 (292)
T COG3176 61 SEELDARLDAAALERIPDQDRFDIVCNH-LGVRDGVI-VADLLKQLVGTYRLLANAQALRAGGFYSALEFPV-DWLEELR 137 (292)
T ss_pred hhhcCcccccccccccCCCCCeeEeccc-cceecccc-hhhhHhhhcCceEEeehHHHHHhCCCccccccce-eeecccC
Confidence 3445567778889999999999999999 55567744 4444555667788888833322 2210 01110 0111111
Q ss_pred HhcCccccHHHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeeecchhhhhhh
Q 005190 508 IMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIV 583 (709)
Q Consensus 508 ~~g~i~v~~~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~~~~~~~ 583 (709)
....+-..|..+.+.+++|++|++||.|.-+.... +....+.| ..-+.+++.+++++++|+++.|-+....++
T Consensus 138 ~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~-g~~~~~~g--caS~~~~~~~~~a~~~p~~~~~r~~~~f~~ 210 (292)
T COG3176 138 PKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDK-GRLDDMPG--CASVPGLPRKHGAALAPVHHNGRNSALFYL 210 (292)
T ss_pred hHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhc-cCcccCcc--ccccccchhhcccccchhheecccCCchhh
Confidence 22244456677888999999999999998766554 55555555 777888999999999999998766553333
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.4e-05 Score=89.49 Aligned_cols=191 Identities=15% Similarity=0.110 Sum_probs=114.5
Q ss_pred CCCCCEEEEeCCCCCCcccHH----HHHHHh--cCCceEEEEeCCCCCCC---------------CHHHHHHHHHHHHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLI----RQHQRL--GKIFDIWCLHIPVKDRT---------------SFTGLVKLVESTVRS 187 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~----~~~~~L--~~~~~Vi~~Dl~G~G~S---------------s~~~~~~dl~~~l~~ 187 (709)
.+.-|+||.+||.+++..... .+...+ ..++-|+.+|.||-|.. ..+|...-+..+++.
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 345778999999987322111 122223 47899999999998766 234444444455444
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCc-eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDI-DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~-v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
. ..+.+++.+.|+|.||.+++.++...|+. ++..+.++|++.+....-....+. ++.+
T Consensus 603 ~--~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~tery-------------------mg~p 661 (755)
T KOG2100|consen 603 P--FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERY-------------------MGLP 661 (755)
T ss_pred c--cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhh-------------------cCCC
Confidence 2 33457899999999999999999999844 555588999776431110000000 0000
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccE-EEEeeCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQM-LVLCSGKDQL 345 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-Lvi~G~~D~~ 345 (709)
. .....+... .....+..++.|. |++||+.|.-
T Consensus 662 -------------~--~~~~~y~e~-------------------------------~~~~~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 662 -------------S--ENDKGYEES-------------------------------SVSSPANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred -------------c--cccchhhhc-------------------------------cccchhhhhccCCEEEEEcCCcCC
Confidence 0 000001100 0012234455555 9999999999
Q ss_pred CCcHHHHHHHHhhcC----CcEEEEEcCCCccccccCh-hhHHHHHh
Q 005190 346 MPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDG-VDLVTIIK 387 (709)
Q Consensus 346 v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p-~~~~~~I~ 387 (709)
|..++ ...+.+.+. .+++.++|+..|.+-.-.. ..+...+.
T Consensus 696 Vh~q~-s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~ 741 (755)
T KOG2100|consen 696 VHFQQ-SAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLD 741 (755)
T ss_pred cCHHH-HHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHH
Confidence 99887 555554332 3889999999999886443 23334444
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00011 Score=80.53 Aligned_cols=104 Identities=19% Similarity=0.169 Sum_probs=71.5
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHHH-------------------hcCCceEEEEeCC-CCCCC----------CHHHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQR-------------------LGKIFDIWCLHIP-VKDRT----------SFTGLV 178 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~~-------------------L~~~~~Vi~~Dl~-G~G~S----------s~~~~~ 178 (709)
.++.|+||++.|.+|++..+..+.+. +.+..+++.+|.| |.|.| +.++.+
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHH
Confidence 45789999999999998888654321 1134789999955 89999 346777
Q ss_pred HHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHHh----C------CCceeEEEEecCCCCc
Q 005190 179 KLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----N------PDIDLVLILVNPATSF 232 (709)
Q Consensus 179 ~dl~~~l~~~~~~~~---~~~v~LvGhS~GG~iAl~~A~~----~------P~~v~~lVl~~p~~~~ 232 (709)
+++..+|..+..+.+ ..+++|.|.|+||..+-.+|.. . +-.++|+++.++....
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 777777777665443 4689999999999988777753 2 2348899999997764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.1e-05 Score=83.46 Aligned_cols=97 Identities=13% Similarity=-0.017 Sum_probs=56.6
Q ss_pred CCCEEEEeCCCCCCccc----H--------------HHHHHHh-cCCceEEEEeCCCCCCC------------CHHH---
Q 005190 131 DSPLLLFLPGIDGVGLG----L--------------IRQHQRL-GKIFDIWCLHIPVKDRT------------SFTG--- 176 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~----~--------------~~~~~~L-~~~~~Vi~~Dl~G~G~S------------s~~~--- 176 (709)
..|.||++||-++.... + ......| .+||-|+++|.+|+|+. +.+.
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 36789999997665322 1 1134556 48999999999999876 1111
Q ss_pred ------------HHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 177 ------------LVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 177 ------------~~~dl~~~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
.+-|....++.+..+- ..++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 1222334555554432 246899999999999999999986 46776666544
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.1e-05 Score=70.33 Aligned_cols=99 Identities=15% Similarity=0.055 Sum_probs=74.8
Q ss_pred CEEEEeCCCCCCcc---cHHHHHHHh-cCCceEEEEe----CCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005190 133 PLLLFLPGIDGVGL---GLIRQHQRL-GKIFDIWCLH----IPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (709)
Q Consensus 133 p~Vv~lHG~~~s~~---~~~~~~~~L-~~~~~Vi~~D----l~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~ 204 (709)
-.|||+-|++..-. ....+...| ..+|.++-+- +-|+|.+++.+-++|+..+++++....-...|+|+|||.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhST 116 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHST 116 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecCc
Confidence 35899999876543 233455566 4778888875 457888899999999999999876544456899999999
Q ss_pred hHHHHHHHHHh--CCCceeEEEEecCCCC
Q 005190 205 GACIALAVAAR--NPDIDLVLILVNPATS 231 (709)
Q Consensus 205 GG~iAl~~A~~--~P~~v~~lVl~~p~~~ 231 (709)
|+.=.+.|..+ .|..+.+.|+.+|+..
T Consensus 117 GcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 117 GCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred cchHHHHHHHhccchHHHHHHHHhCccch
Confidence 99998888733 3666777888877554
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00023 Score=72.14 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCCEEEEeCCCCCCcccHH------HHHHHh--cCCceEEEEeCCCCCCC----CHHHHHHHHHHHHHHhhccC---CCC
Q 005190 131 DSPLLLFLPGIDGVGLGLI------RQHQRL--GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS---PKR 195 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~------~~~~~L--~~~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~~~~~~---~~~ 195 (709)
....||+.-|.++.-+... .....+ ..+.+|+.+.+||.|.| +.++++.|-.+.+++++++. ..+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~ 215 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAK 215 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChh
Confidence 3558999999887665521 233333 25799999999999999 77999999999999987633 237
Q ss_pred CEEEEEechhHHHHHHHHHhC
Q 005190 196 PVYLVGESLGACIALAVAARN 216 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~ 216 (709)
.+++.|||+||.++..++.++
T Consensus 216 ~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 216 NIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred eEEEeeccccHHHHHHHHHhc
Confidence 899999999999998866654
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.7e-05 Score=74.21 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=37.4
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT 172 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S 172 (709)
++-|+|||-||++++...|..+...|+ .||-|.+++.|-+..+
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcce
Confidence 357899999999999999999999995 7899999999876544
|
|
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.6e-05 Score=80.98 Aligned_cols=109 Identities=17% Similarity=0.096 Sum_probs=81.8
Q ss_pred CCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH-------------
Q 005190 450 GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG------------- 516 (709)
Q Consensus 450 ~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~------------- 516 (709)
-++|+|.-|.+. +|..++...+....=.+++..|--.|- .|..+.++++.|++.+.|
T Consensus 296 heiVyvpcHRSh-iDylLLsy~ly~ngLvPpHiaAGINLN---------f~p~G~i~RR~GAfFIRRsfKgn~LYs~Vfr 365 (810)
T COG2937 296 HEIVYVPCHRSH-IDYLLLSYVLYHNGLVPPHIAAGINLN---------FWPMGPIFRRGGAFFIRRTFKGNPLYSTVFR 365 (810)
T ss_pred CceEEEecchhh-hhHHHHHHHHHhcCCCcchhhcccccc---------CccchHHHHhccceEEEeccCCChhHHHHHH
Confidence 489999999986 799888887765322455544432222 134788999999999988
Q ss_pred HHHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhHHHHHHHc-------CCcEEEeeeec
Q 005190 517 INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVPFGAVG 575 (709)
Q Consensus 517 ~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~-------~~pIvPv~~~G 575 (709)
+....+..+|.+|=-|-||+|+ +..++. +-|.|...|-+++ -+-+|||+|.-
T Consensus 366 EYl~~Lf~rgysleyfIEGGRS------RTGrlL-~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgY 424 (810)
T COG2937 366 EYLGELFSRGYSLEYFIEGGRS------RTGRLL-PPKTGMLSMTLQAMLRGRTRPILLVPVYIGY 424 (810)
T ss_pred HHHHHHHhCCcceEEEeecCcc------ccCCcC-CCccchHHHHHHHHhcCCCCCeEEEeeEeeh
Confidence 2355678999999999999995 445666 9999998888776 37789999943
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.6e-05 Score=80.34 Aligned_cols=163 Identities=18% Similarity=0.250 Sum_probs=107.7
Q ss_pred CCCEEEEeCCCC--CCcccHH-HHHHHh---cCCceEEEEeCCCC-CCCCH----HHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 131 DSPLLLFLPGID--GVGLGLI-RQHQRL---GKIFDIWCLHIPVK-DRTSF----TGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~--~s~~~~~-~~~~~L---~~~~~Vi~~Dl~G~-G~Ss~----~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
..|.++++||.+ .....|. .+...| .+...+-.+|++.- |.-.+ +.+.......+..+...++..+++|
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~IiL 254 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPIIL 254 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceEE
Confidence 567899999987 1122222 233333 35566777776543 32333 4455555555556667788899999
Q ss_pred EEechhHHHHHHHHHhCCCc-eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 200 VGESLGACIALAVAARNPDI-DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~-v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
+|.|||+.++.+++....+. |+++|+++=.......+.
T Consensus 255 vGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr----------------------------------------- 293 (784)
T KOG3253|consen 255 VGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR----------------------------------------- 293 (784)
T ss_pred EecccCceeeEEeccccCCceEEEEEEecccccCCCccc-----------------------------------------
Confidence 99999988888877665433 777777643111100000
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
....+.+..++.|+|++.|.+|..+++.. .+.+++.
T Consensus 294 -------------------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~-ME~vreK 329 (784)
T KOG3253|consen 294 -------------------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNS-MEEVREK 329 (784)
T ss_pred -------------------------------------------CCcchhhHhcCCceEEEecCCcccCCHHH-HHHHHHH
Confidence 00013446688999999999999999996 8888875
Q ss_pred cC-CcEEEEEcCCCccccccC
Q 005190 359 LH-KCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 359 ~~-~~~~~~i~~aGH~~~le~ 378 (709)
.. ..+++++.+++|.+-.-.
T Consensus 330 MqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 330 MQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred hhccceEEEecCCCccccCCc
Confidence 54 688999999999976543
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.89 E-value=3e-05 Score=76.45 Aligned_cols=84 Identities=17% Similarity=0.130 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC---CceEEEEeCCCC----CCC--CHHHHHHHHHHHHHHhhccCCC--CCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPVK----DRT--SFTGLVKLVESTVRSESNRSPK--RPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~Dl~G~----G~S--s~~~~~~dl~~~l~~~~~~~~~--~~v~L 199 (709)
+...|||+||+.|+...|..+...+.. .+.--.+...++ +.+ +++..++.+.+-+......... .++++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 355899999999999999887777743 221111111111 122 4555555544333333332333 58999
Q ss_pred EEechhHHHHHHHHH
Q 005190 200 VGESLGACIALAVAA 214 (709)
Q Consensus 200 vGhS~GG~iAl~~A~ 214 (709)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999865554
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=9.2e-05 Score=73.35 Aligned_cols=117 Identities=21% Similarity=0.166 Sum_probs=83.0
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHH--HHhc--CCceEEEEeC-CC------CCCC-------CH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQH--QRLG--KIFDIWCLHI-PV------KDRT-------SF 174 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~--~~L~--~~~~Vi~~Dl-~G------~G~S-------s~ 174 (709)
+|....+..|...+.+ .+.|+||+|||-.++...+.... ..|+ .+|-|..+|- ++ ++.+ .-
T Consensus 43 ~g~~r~y~l~vP~g~~-~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g 121 (312)
T COG3509 43 NGLKRSYRLYVPPGLP-SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG 121 (312)
T ss_pred CCCccceEEEcCCCCC-CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCC
Confidence 4444445555666653 34589999999999988777654 6664 6788888852 21 2222 11
Q ss_pred HHHHHHHHHHHHHhhccCCCC--CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 175 TGLVKLVESTVRSESNRSPKR--PVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~~~--~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
.+-+.++.++++.+..++..+ +|++.|.|-||.++..+++.+|+.+.++..++...
T Consensus 122 ~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 344566777777776666654 89999999999999999999999999888776544
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.1e-05 Score=71.36 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=76.5
Q ss_pred EEEEeCCCCCCcccHHHHHHHhcCCc------eEEEEeCCCC----C------------------CCCHHHHHHHHHHHH
Q 005190 134 LLLFLPGIDGVGLGLIRQHQRLGKIF------DIWCLHIPVK----D------------------RTSFTGLVKLVESTV 185 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~~~~~L~~~~------~Vi~~Dl~G~----G------------------~Ss~~~~~~dl~~~l 185 (709)
+.||+||.+|+..+....+..|.+.+ -+..+|--|- | +++..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 68999999999999999998885443 3555666552 1 015678889999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCCc-----eeEEEEecCCC
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDI-----DLVLILVNPAT 230 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~-----v~~lVl~~p~~ 230 (709)
.++...+...++.+|||||||.-...++..+... +..+|.++...
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 9999999999999999999999999999876322 66788776533
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00043 Score=74.79 Aligned_cols=101 Identities=21% Similarity=0.127 Sum_probs=74.8
Q ss_pred CCCCEEEEeCCCCCCcccHHH-----H--HHHh-cCCceEEEEeCCCCCCC---------------CHHHHHHHHHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIR-----Q--HQRL-GKIFDIWCLHIPVKDRT---------------SFTGLVKLVESTVR 186 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~-----~--~~~L-~~~~~Vi~~Dl~G~G~S---------------s~~~~~~dl~~~l~ 186 (709)
+.-|+++++-|.++--..... . ...| +.||-|+++|-||.-.. ..+|.++-+.-+.+
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 357899999998764332211 1 1233 48999999999996433 55777777777776
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+.. -...++|.+.|+|+||.++++..+++|+.++..|.-+|++.
T Consensus 720 q~g-fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 720 QTG-FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD 763 (867)
T ss_pred hcC-cccchheeEeccccccHHHHHHhhcCcceeeEEeccCccee
Confidence 633 23467899999999999999999999999988877766543
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00017 Score=72.04 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=62.9
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCC---H--HHH--HHH-HHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS---F--TGL--VKL-VESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss---~--~~~--~~d-l~~~l~~~~~~~~~~~v~LvGhS 203 (709)
...|||.-|..|--+ ..-....+..+|.|+.+++||++.|+ + ++. ++. +.-.+.. .....+.++|.|+|
T Consensus 243 q~LvIC~EGNAGFYE-vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~--Lgf~~edIilygWS 319 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYE-VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQV--LGFRQEDIILYGWS 319 (517)
T ss_pred ceEEEEecCCccceE-eeeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHH--cCCCccceEEEEee
Confidence 447888888765221 11233445579999999999999991 1 111 111 2222222 12346789999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecC
Q 005190 204 LGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
.||..++.+|..+|+ |+++||-++
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecc
Confidence 999999999999997 778888655
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.001 Score=71.98 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=61.2
Q ss_pred CCCEEEEeCCCCCCc-ccHHHHHHHh-cCC----ceEEEEeCCCC-CCC----CH----HHHHHHHHHHHHHhhc-cCCC
Q 005190 131 DSPLLLFLPGIDGVG-LGLIRQHQRL-GKI----FDIWCLHIPVK-DRT----SF----TGLVKLVESTVRSESN-RSPK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~~~~~L-~~~----~~Vi~~Dl~G~-G~S----s~----~~~~~dl~~~l~~~~~-~~~~ 194 (709)
..|+|+++||..-.. ......+..| +++ .-++.+|..+. .++ .. ..+.+++.-.++.... ....
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 578999999953211 1122233444 333 34567775321 121 11 2233444444444211 1224
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
++.+|+|+||||..|+.++.++|+.+.+++..++..
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 578999999999999999999999999999998854
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0025 Score=64.06 Aligned_cols=59 Identities=17% Similarity=0.192 Sum_probs=47.6
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC----CcEEEEEcCCCcccccc-ChhhHHHHHhh
Q 005190 329 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLE-DGVDLVTIIKG 388 (709)
Q Consensus 329 ~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le-~p~~~~~~I~~ 388 (709)
....+|-|++++++|.+++.++ .++..+... +++...+++++|..|+. +|++..+.+.+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~-ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~ 238 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRD-VEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDE 238 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHH-HHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHh
Confidence 3456999999999999999987 776665332 47788899999999876 78888888873
|
|
| >PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00035 Score=72.63 Aligned_cols=122 Identities=13% Similarity=0.042 Sum_probs=73.2
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HH
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RI 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~ 508 (709)
.+++.|.|++- .++|+|+++-|.. .++....... ..+..+..+..+.- + +.+..++ ..
T Consensus 104 ~~~~~g~e~l~~a~~~g~gvIl~t~H~G-nwE~~~~~l~---~~~~~~~~i~~~~~--n--------~~~~~~~~~~R~~ 169 (295)
T PF03279_consen 104 RVEIEGEEHLEAALAEGRGVILLTGHFG-NWELAGRALA---RRGPPVAVIYRPQK--N--------PYIDRLLNKLRER 169 (295)
T ss_pred EEEEECHHHHHHHHhcCCCCEEeCcCcC-hHHHHHHHHH---hhCCceEEEecCCc--c--------HhHHHHHHHHHHh
Confidence 45688888776 5789999999962 3575443332 23445555555431 1 1122232 34
Q ss_pred hcCccccH----HHHHHHhcCCCeEEEecCchhhhhccCCccce---eccCCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MGAVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEYK---LFWPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g~i~v~~----~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~---l~~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.|.--+++ ..+.++|++|+.|++.+...... ..+-..+ -.-....|.++||.++|+||||+++.
T Consensus 170 ~g~~~i~~~~~~~~~~~~Lk~g~~v~~l~Dq~~~~--~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~ 240 (295)
T PF03279_consen 170 FGIELIPKGEGIRELIRALKEGGIVGLLGDQDPGK--KDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAY 240 (295)
T ss_pred cCCeEecchhhHHHHHHHhccCCEEEEEECCCCCC--CCceEEeECCeecccccHHHHHHHHhCCcEEEEEEE
Confidence 44433333 34678899999999998753210 0011111 11134589999999999999999994
|
Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00015 Score=76.38 Aligned_cols=98 Identities=13% Similarity=0.124 Sum_probs=74.1
Q ss_pred EEEEeCCCCCCcccHHHHHHHhc-CCce---EEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHH
Q 005190 134 LLLFLPGIDGVGLGLIRQHQRLG-KIFD---IWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACI 208 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~~~~~L~-~~~~---Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~i 208 (709)
+++++||++.+...|..+...+. .++. ++.++.++.... +.....+.+...++.+....+.+++.|+||||||.+
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~ 140 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLD 140 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccchh
Confidence 69999999888888888777774 4454 888888865222 444444455555555555566789999999999999
Q ss_pred HHHHHHhCC--CceeEEEEecCCCC
Q 005190 209 ALAVAARNP--DIDLVLILVNPATS 231 (709)
Q Consensus 209 Al~~A~~~P--~~v~~lVl~~p~~~ 231 (709)
+..++...+ ..|+.++.++++-.
T Consensus 141 ~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 141 SRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred hHHHHhhcCccceEEEEEEeccCCC
Confidence 999999888 88999999887544
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0024 Score=61.62 Aligned_cols=77 Identities=27% Similarity=0.310 Sum_probs=51.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceE-EEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDI-WCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~V-i~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
...|||+.|++++...+.++. +..+++| +++|++.-. ++ . + + ...+.+.|||+|||-.+|.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~---~d-----~-~-~------~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLD---FD-----F-D-L------SGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccc---cc-----c-c-c------ccCceEEEEEEeHHHHHHH
Confidence 458999999999888776653 2345554 556777432 11 1 1 1 2257899999999999988
Q ss_pred HHHHhCCCceeEEEEecC
Q 005190 211 AVAARNPDIDLVLILVNP 228 (709)
Q Consensus 211 ~~A~~~P~~v~~lVl~~p 228 (709)
.+....| ++..|.+|.
T Consensus 73 ~~l~~~~--~~~aiAING 88 (213)
T PF04301_consen 73 RVLQGIP--FKRAIAING 88 (213)
T ss_pred HHhccCC--cceeEEEEC
Confidence 8765543 455566655
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00061 Score=69.61 Aligned_cols=101 Identities=17% Similarity=0.198 Sum_probs=71.5
Q ss_pred CCCEEEEeCCCCCCccc----HHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLG----LIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~----~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
++.++||+||+.-+-.. ...+.........++.+-+|..|.- +.+.-..+++.++..+....+.++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 56689999999765432 2223333345577888899987754 44555667888888887777789999
Q ss_pred EEEechhHHHHHHHHHhC--------CCceeEEEEecCCCC
Q 005190 199 LVGESLGACIALAVAARN--------PDIDLVLILVNPATS 231 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~--------P~~v~~lVl~~p~~~ 231 (709)
|++||||.++++....+- +..++-+||.+|-..
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999998876542 334666777766433
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0043 Score=60.17 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=42.9
Q ss_pred EEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccc-cccChhhHHHHHh
Q 005190 335 MLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFL-LLEDGVDLVTIIK 387 (709)
Q Consensus 335 vLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~-~le~p~~~~~~I~ 387 (709)
+.++.+++|..+|... ...+.+.+|++++..++ .||.. ++-+-+.+.+.|.
T Consensus 309 ~ivv~A~~D~Yipr~g-v~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~ 360 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTG-VRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIV 360 (371)
T ss_pred EEEEEecCCccccccC-cHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHH
Confidence 6788999999999987 99999999999999999 58875 4556677777776
|
|
| >PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0015 Score=67.54 Aligned_cols=119 Identities=11% Similarity=0.084 Sum_probs=68.8
Q ss_pred CCceeeccCCCC--CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HHh
Q 005190 436 NGKIVRGLSGIP--SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIM 509 (709)
Q Consensus 436 ~~~~~~g~e~ip--~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~~ 509 (709)
.+++++|.|++- .++|+|+++-|. ..+|........ .+..+..+..+.- ++ .+-.++ ...
T Consensus 98 ~~v~~~g~e~l~~~~gkgvIl~t~H~-GnwE~~~~~l~~---~~~~~~~vyr~~~--n~--------~~d~~~~~~R~~~ 163 (290)
T PRK06628 98 RRIEIIGIENIKKLEGQPFLLFSGHF-ANWDISLKILHK---FYPKVAVIYRKAN--NP--------YVNKLVNESRAGD 163 (290)
T ss_pred CeEEEeCHHHHHHhcCCcEEEEEecc-hHHHHHHHHHHH---hCCCeeEEEecCC--CH--------HHHHHHHHHHHhc
Confidence 355677776653 357999999996 235775443332 2223444443321 11 122222 234
Q ss_pred cCccc--cH---HHHHHHhcCCCeEEEecCch-----hhhhccCCccceeccCCChhHHHHHHHcCCcEEEeeee
Q 005190 510 GAVPV--SG---INLYKLMSSKSHVLLYPGGV-----REALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 510 g~i~v--~~---~~~~~~L~~g~~v~ifPeG~-----r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
|.-.+ .+ ..+.++|++|+.|++.|.=. .-.+. |..- ..-+|.++||.++|+||||+++.
T Consensus 164 g~~~i~~~~~~~r~l~k~Lk~g~~v~il~Dq~~~~gv~v~FF--G~~a----~t~~~~a~LA~~~~apvv~~~~~ 232 (290)
T PRK06628 164 KLRLIPKGPEGSRALVRAIKESESIVMLVDQKMNDGIEVPFL--GHPA----MTASAIAKIALQYKYPIIPCQII 232 (290)
T ss_pred CCceecCCCchHHHHHHHHHcCCeEEEEecccCCCCeeeecC--CCcc----ccchHHHHHHHHHCCCEEEEEEE
Confidence 43333 22 45778899999999995332 11111 1111 23489999999999999999993
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00039 Score=76.93 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=60.4
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-----------------CCceEEEEeCCC-----CCCCCHHHHHHHHHHHHHHh
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-----------------KIFDIWCLHIPV-----KDRTSFTGLVKLVESTVRSE 188 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-----------------~~~~Vi~~Dl~G-----~G~Ss~~~~~~dl~~~l~~~ 188 (709)
++-+|+|++|..||...-+.++..-. ..++.+++|.-+ ||. +..+.++-+.+.+..+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-~l~dQtEYV~dAIk~I 166 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-ILLDQTEYVNDAIKYI 166 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-hHHHHHHHHHHHHHHH
Confidence 46679999999999887776554332 237788888754 233 4455555555555544
Q ss_pred hccC------C---CCCEEEEEechhHHHHHHHHHhC---CCceeEEEEec
Q 005190 189 SNRS------P---KRPVYLVGESLGACIALAVAARN---PDIDLVLILVN 227 (709)
Q Consensus 189 ~~~~------~---~~~v~LvGhS~GG~iAl~~A~~~---P~~v~~lVl~~ 227 (709)
...+ + ...|+||||||||.+|...+... ++.|.-++..+
T Consensus 167 LslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 167 LSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 4322 1 34599999999999997665431 33454444443
|
|
| >PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0013 Score=68.74 Aligned_cols=161 Identities=14% Similarity=0.125 Sum_probs=95.6
Q ss_pred CCceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----H
Q 005190 436 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 507 (709)
Q Consensus 436 ~~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~ 507 (709)
...++.|.|++. .++|+|+++-|. ..+|....... ..+.++..+..+.-- +.+-.++ .
T Consensus 115 ~~~~~~g~e~l~~a~a~gkgvIllt~H~-GnWE~~~~~l~---~~~~~~~~vyr~~~n----------~~~d~~i~~~R~ 180 (308)
T PRK06553 115 GRVEVRGIEIFERLRDDGKPALIFTAHL-GNWELLAIAAA---AFGLDVTVLFRPPNN----------PYAARKVLEARR 180 (308)
T ss_pred CeeEecCHHHHHHHHhcCCCEEEEeeCc-hHHHHHHHHHH---HcCCceEEEEecCCC----------hHHHHHHHHHHH
Confidence 345677877664 357999999996 23577543322 234445555444321 1122232 2
Q ss_pred HhcCccc--cH---HHHHHHhcCCCeEEEecCchh--hh---hccCCccceeccCCChhHHHHHHHcCCcEEEeeeecch
Q 005190 508 IMGAVPV--SG---INLYKLMSSKSHVLLYPGGVR--EA---LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGED 577 (709)
Q Consensus 508 ~~g~i~v--~~---~~~~~~L~~g~~v~ifPeG~r--~~---~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~~G~~ 577 (709)
..|..-+ ++ ..+.++|++|+.|++.|.-.- .. +. |+. -..-+|.++||.++|+||||+++.-
T Consensus 181 ~~g~~~i~~~~~~~r~l~r~Lk~g~~v~il~DQ~~~~gv~v~FF--G~~----a~t~~~~a~LA~~~~apVvp~~~~R-- 252 (308)
T PRK06553 181 TTMGGLVPSGAGAAFALAGVLERGGHVGMLVDQKFTRGVEVTFF--GRP----VKTNPLLAKLARQYDCPVHGARCIR-- 252 (308)
T ss_pred HcCCCcccCCChHHHHHHHHHHcCCeEEEEecccCCCCceeccC--CCc----CCCCchHHHHHHHHCCCEEEEEEEE--
Confidence 3333222 33 346678899999999954321 11 11 111 1334889999999999999999931
Q ss_pred hhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcccccCCHHH
Q 005190 578 DLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREK 657 (709)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~~~~~~~~ 657 (709)
.-.++..+.|.+|++.+.. .+.+++
T Consensus 253 ----------------------------------------------------~~~g~y~i~~~~~~~~~~~---~~~~~d 277 (308)
T PRK06553 253 ----------------------------------------------------LPGGRFRLELTERVELPRD---ADGQID 277 (308)
T ss_pred ----------------------------------------------------cCCCeEEEEEecCCCCCCC---CCcccc
Confidence 0134588888999886522 123445
Q ss_pred HHHHHHHHHHHHHHHH
Q 005190 658 AHELYLEIKSEVEKCL 673 (709)
Q Consensus 658 ~~~~~~~v~~~i~~~~ 673 (709)
+++..+++.+.+|+.+
T Consensus 278 ~~~~t~~~n~~lE~~I 293 (308)
T PRK06553 278 VQATMQALTDVVEGWV 293 (308)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666777777777766
|
|
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00046 Score=70.93 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=72.4
Q ss_pred HHHHhcC-CCeEEEecCchhhhhccCCccceeccCCChh----HHHHHHHcCCc--EEEeeeecchhhhhhhcCcccccc
Q 005190 519 LYKLMSS-KSHVLLYPGGVREALHRKGEEYKLFWPESSE----FVRMATTFGAK--IVPFGAVGEDDLAQIVLDYNDQMK 591 (709)
Q Consensus 519 ~~~~L~~-g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G----~~~lA~~~~~p--IvPv~~~G~~~~~~~~~~~~~~~~ 591 (709)
+...|++ |..++|||+|+|........+...- ||..- |-+|+.+.|+| +.|+++. +.|+ +-
T Consensus 286 ~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~pa-pFD~~svd~mR~l~~~s~~ptHfYPlAl~-~yDI----------mP 353 (426)
T PLN02349 286 MALLLREGGQLIWIAPSGGRDRPDPLTGEWTPA-PFDPSAVDNMRRLTEKSKAPGHFYPLAML-SYDI----------MP 353 (426)
T ss_pred HHHHHhcCCeEEEEeCCCCCCCCCccCCCccCC-CCChHHHHHHHHHHHhcCCCccccchHHH-hCcc----------CC
Confidence 4557888 6789999999997554412223333 56644 55688888875 7777773 2222 11
Q ss_pred Cc-cchHHHHHHHhhhhhccccccccccCcccccCccCCC---CCceEEEEecCccccCCcccccC-CHHHHHHHHHHHH
Q 005190 592 IP-YFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPK---VPGRFYFYFGKPIETKGRKRELR-DREKAHELYLEIK 666 (709)
Q Consensus 592 ~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~---~~~~~~~~~G~pI~~~~~~~~~~-~~~~~~~~~~~v~ 666 (709)
-| -+- + ++--+ .-+.+-+-+|+-|.......... ..+.-+++.+.+.
T Consensus 354 PP~~VE---k-------------------------eIGE~R~v~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~ 405 (426)
T PLN02349 354 PPPQVE---K-------------------------EIGERRLVGFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAY 405 (426)
T ss_pred Cccccc---c-------------------------ccCceeeeeeecceeeeccccchHhhhhhcCChHHHHHHHHHHHH
Confidence 11 000 0 00001 13557788899998765422223 3455667778888
Q ss_pred HHHHHHHHHHHHH
Q 005190 667 SEVEKCLAYLKEK 679 (709)
Q Consensus 667 ~~i~~~~~~l~~~ 679 (709)
+.+.+.+..|+..
T Consensus 406 ~~V~~~Y~~L~~a 418 (426)
T PLN02349 406 ASVVEQYAVLKSA 418 (426)
T ss_pred HHHHHHHHHHHHh
Confidence 8999998888765
|
|
| >COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0016 Score=66.91 Aligned_cols=122 Identities=17% Similarity=0.105 Sum_probs=72.5
Q ss_pred CceeeccCCCCC----CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HH
Q 005190 437 GKIVRGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RI 508 (709)
Q Consensus 437 ~~~~~g~e~ip~----~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~ 508 (709)
++++.|.|++.. ++|+|+++=|.. .+|+......- .+..+..+.++.-. +.+-+++ ..
T Consensus 106 ~~~v~g~e~l~e~l~~~~gvIl~~~H~g-n~E~~~~~l~~---~~~~~~~~yrp~~n----------p~ld~~i~~~R~r 171 (308)
T COG1560 106 RVEVEGLEHLEEALANGRGVILVTPHFG-NWELGGRALAQ---QGPKVTAMYRPPKN----------PLLDWLITRGRER 171 (308)
T ss_pred eeeecCHHHHHHHHHcCCCEEEEecCcc-hHHHHHHHHHH---hCCCeeEEecCCCC----------HHHHHHHHHHHHh
Confidence 467899988754 679999999963 36776655542 23333344333222 1122222 23
Q ss_pred hc--CccccH---HHHHHHhcCCCeEEEecCchhhhhccCCccceecc---CCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MG--AVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW---PESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g--~i~v~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~---~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.| .+|... +.+.+.|++|+.|++-|.=...... +...+.+- .--+|..+||.++|++|||++++
T Consensus 172 ~~~~~~~~~~~~ir~li~~Lk~G~~v~~lpDqd~~~~~--~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~ 243 (308)
T COG1560 172 FGGRLLPRKGEGIRQLIKALKQGEAVGYLPDQDYGPGE--SVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPV 243 (308)
T ss_pred cCCcccCCCchhHHHHHHHHhcCCeEEEecCcccCCCC--CeEeccCCCcccccchHHHHHHHhCCCEEEEEEE
Confidence 33 333322 3467889999999999965421100 00011110 11289999999999999999994
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00099 Score=73.36 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=68.4
Q ss_pred CCCEEEEeCCCCCCcccH---HHHHHHhc--CCceEEEEeCCCCCCC--------------CHHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDGVGLGL---IRQHQRLG--KIFDIWCLHIPVKDRT--------------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~---~~~~~~L~--~~~~Vi~~Dl~G~G~S--------------s~~~~~~dl~~~l~~~~~~ 191 (709)
++|++|++-|=+ +...+ ..+...|+ -+.-+++++.|-+|.| +.++..+|+..+++++...
T Consensus 28 ~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 366666665543 33221 12344454 3678999999999999 6688999999999998854
Q ss_pred C---CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 192 S---PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 192 ~---~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
. ...|++++|-|+||++|..+-.+||+.+.|.+..+++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 4 356899999999999999999999999999998776443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00021 Score=72.31 Aligned_cols=102 Identities=22% Similarity=0.225 Sum_probs=62.1
Q ss_pred CCCCCEEEEeCCCCCCcccHH--HHHHHh-cC----CceEEEEeCCCCCC-----------------C-CHHH----HHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLI--RQHQRL-GK----IFDIWCLHIPVKDR-----------------T-SFTG----LVK 179 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~--~~~~~L-~~----~~~Vi~~Dl~G~G~-----------------S-s~~~----~~~ 179 (709)
...-|+|+++||.......+. ..+..+ .+ ..-+++++..+.+. . .... +.+
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 345789999999722222221 123323 22 14466677655550 0 1122 233
Q ss_pred HHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 180 LVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 180 dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
++...|+.-....+. +..|+|+||||..|+.++.++|+.+.+++.++|...
T Consensus 101 el~p~i~~~~~~~~~-~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 101 ELIPYIEANYRTDPD-RRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHHHSSEEEC-CEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred cchhHHHHhcccccc-eeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 444444442221222 289999999999999999999999999999988544
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.016 Score=63.02 Aligned_cols=114 Identities=24% Similarity=0.270 Sum_probs=74.4
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHH----------------Hh-------cCCceEEEEe-CCCCCCC--
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQ----------------RL-------GKIFDIWCLH-IPVKDRT-- 172 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~----------------~L-------~~~~~Vi~~D-l~G~G~S-- 172 (709)
++.|.+.....+..|+|+++-|.+|++..+..+.+ .+ .+..+++.+| ..|.|.|
T Consensus 55 f~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~ 134 (437)
T PLN02209 55 FYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYS 134 (437)
T ss_pred EEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCC
Confidence 34444433334468999999999888876544321 11 1336899999 6788887
Q ss_pred -------CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHHh----C------CCceeEEEEecCCCCc
Q 005190 173 -------SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----N------PDIDLVLILVNPATSF 232 (709)
Q Consensus 173 -------s~~~~~~dl~~~l~~~~~~~~---~~~v~LvGhS~GG~iAl~~A~~----~------P~~v~~lVl~~p~~~~ 232 (709)
+-++.++++..++.......+ ..+++|.|.|+||..+-.+|.. . +=.++|+++.++....
T Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 135 KTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred CCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 123445666666666554443 4689999999999877766653 1 1137899998886553
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0016 Score=64.27 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=65.8
Q ss_pred CCCCcccccccCC-CCCCCC-CEEEEeCCCCCCcccHH-HHHHHhc--------CCceEEEEeC-CCCCCC--CHHHHHH
Q 005190 114 GGPPRWFSPLECG-SHTRDS-PLLLFLPGIDGVGLGLI-RQHQRLG--------KIFDIWCLHI-PVKDRT--SFTGLVK 179 (709)
Q Consensus 114 g~~~~~~~~~~~g-~p~~~~-p~Vv~lHG~~~s~~~~~-~~~~~L~--------~~~~Vi~~Dl-~G~G~S--s~~~~~~ 179 (709)
|....+..|...+ +|.++- |.|||+||.+..+..-. .+..-+. ..+-|+++-+ +-+..+ ..+.+..
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~ 250 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLI 250 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHH
Confidence 3333344444322 233344 89999999988775433 2222211 1233444431 111112 1122223
Q ss_pred HHHHHHH-HhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 180 LVESTVR-SESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 180 dl~~~l~-~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
...++++ .+..++ ...+|+++|.|+||+-++.++.++|+.+++.++++.
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 3333333 333333 346899999999999999999999999999999877
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0024 Score=66.81 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=74.8
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHH-------HHHhcCCceEEEEeCCCCC---CC-CHHHHHHHHHHHHH
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ-------HQRLGKIFDIWCLHIPVKD---RT-SFTGLVKLVESTVR 186 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~-------~~~L~~~~~Vi~~Dl~G~G---~S-s~~~~~~dl~~~l~ 186 (709)
.|+.-......++..|+||++||.|-.......+ ...|. ...++++|+--.. .. .+.....++.+..+
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~ 186 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYD 186 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHH
Confidence 5765422221123468999999986544433332 23333 5588999986544 22 55566666666666
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCC-----CceeEEEEecCCCCcc
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNP-----DIDLVLILVNPATSFN 233 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P-----~~v~~lVl~~p~~~~~ 233 (709)
++....+.+.++|+|-|.||.+++.+..... ..-+++||++|+....
T Consensus 187 ~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 187 YLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 6664456789999999999999998875421 1246899999987754
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0028 Score=66.32 Aligned_cols=122 Identities=14% Similarity=0.095 Sum_probs=66.7
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HH
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RI 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~ 508 (709)
.+++.|.|++- .++++|+++=|. ..++....... ..+..+..+..+.-. +.+-.++ ..
T Consensus 114 ~~~~~g~e~l~~a~~~gkgvI~~t~H~-gnwE~~~~~~~---~~~~~~~~vyr~~~n----------~~~d~~~~~~R~~ 179 (314)
T PRK08943 114 RVEWHGLEILEEARANGENVIFLVPHG-WAIDIPAMLLA---SQGQPMAAMFHNQRN----------PLFDWLWNRVRRR 179 (314)
T ss_pred eEEEECHHHHHHHHhCCCCEEEEEech-hHHHHHHHHHH---hcCCCccEEEeCCCC----------HHHHHHHHHHHhh
Confidence 45677777654 467999999995 34565433322 123333333333211 1122222 22
Q ss_pred hcCccccH----HHHHHHhcCCCeEEEecCchhhhhccCCccceec---cCCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MGAVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g~i~v~~----~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.|.--+.. ..+.++|++|+.|++.+.-.-. ...|..-..+ -..-+|.++||.++|+||||+++.
T Consensus 180 ~g~~~i~~~~~~r~i~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~ 250 (314)
T PRK08943 180 FGGRLHAREDGIKPFISSVRQGYWGYYLPDEDHG--PEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPV 250 (314)
T ss_pred cCCeeecCchhHHHHHHHHhCCCeEEEeCCCCCC--CCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEE
Confidence 33322322 3467789999999998643210 0001111111 022378999999999999999994
|
|
| >PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.003 Score=66.02 Aligned_cols=121 Identities=13% Similarity=0.139 Sum_probs=65.8
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH----H
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----I 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~----~ 508 (709)
.+++.|.|++- .++++|+++=|. ..||......... ..+..+..+.- .+.+-.++. .
T Consensus 106 ~~~~~g~e~l~~a~~~gkgvI~~t~H~-GnWE~~~~~~~~~----~~~~~vyr~~~----------n~~~d~~~~~~R~~ 170 (310)
T PRK05646 106 LAHIEGLEHLQQAQQEGQGVILMALHF-TTLEIGAALLGQQ----HTIDGMYREHK----------NPVFDFIQRRGRER 170 (310)
T ss_pred eEEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHcc----CCCeEEeeCCC----------CHHHHHHHHHHhhc
Confidence 44567776553 367999999996 2357754333211 12222222211 111222232 2
Q ss_pred hc--CccccHH---HHHHHhcCCCeEEEecCchhhhhccCCccceec---cCCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MG--AVPVSGI---NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g--~i~v~~~---~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.| .++++++ .+.++|++|+.|++.+.=.-. ...|.....+ -..-+|.++||.++|+||||+++.
T Consensus 171 ~g~~~i~~~~~~~r~ilk~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~ 242 (310)
T PRK05646 171 HNLDSTAIEREDVRGMLKLLRAGRAIWYAPDQDYG--AKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQK 242 (310)
T ss_pred cCCCcccccHhhHHHHHHHHhCCCeEEEeCCCCCC--CCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEE
Confidence 33 3544443 366788999999998542100 0001111111 123489999999999999999994
|
|
| >PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0032 Score=65.17 Aligned_cols=125 Identities=12% Similarity=0.006 Sum_probs=61.9
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcC-
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGA- 511 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~- 511 (709)
.+++.|.|++. .++++|+++=|. ..||................+-+-++.+-.. +...-...|.
T Consensus 89 ~~~~~~~e~l~~~~~~gkgvI~~t~H~-GnWEl~~~~~~~~~~~~~i~r~~~n~~~d~~----------~~~~R~~~g~~ 157 (289)
T PRK08706 89 LVRYRNKHYLDDALAAGEKVIILYPHF-TAFEMAVYALNQDVPLISMYSHQKNKILDEQ----------ILKGRNRYHNV 157 (289)
T ss_pred ceEEECHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHccCCCcEEeeCCCCHHHHHH----------HHHHHhccCCc
Confidence 35677776553 467999999996 3357754333211111111222222222110 1111123333
Q ss_pred -ccccH---HHHHHHh-cCCCeEEEecCchhhhhccCCccceec---cCCChhHHHHHHHcCCcEEEeeee
Q 005190 512 -VPVSG---INLYKLM-SSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 512 -i~v~~---~~~~~~L-~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
+...+ ..+.++| ++|..|++.+.=.- ....|-....+ -..-+|.++||.++|+||||+++.
T Consensus 158 ~i~~~~~~~r~i~k~L~k~~~~v~~l~Dq~~--~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~ 226 (289)
T PRK08706 158 FLIGRTEGLRALVKQFRKSSAPFLYLPDQDF--GRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPV 226 (289)
T ss_pred ccccChhhHHHHHHHHHhCCceEEEeCCCCC--CCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEE
Confidence 22222 3466788 57767676632110 00001000100 133489999999999999999994
|
|
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00031 Score=73.16 Aligned_cols=89 Identities=19% Similarity=0.160 Sum_probs=60.9
Q ss_pred CceeeccCCCCCCCCeEEEeccccchhhHHhhHHHHHHHhcc--eEeeeccccccccccCCCCCCCChHHHHHHhcCccc
Q 005190 437 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNI--LLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 514 (709)
Q Consensus 437 ~~~~~g~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~--~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v 514 (709)
+..++|.+ +.+.++|+++||+.. +|.+.+... ....|. ..+.+++.++-.. |. +++.+...|-|.+
T Consensus 60 ~~~~~~~~--~~~e~alli~NH~~~-~Dwl~~w~~-~~~~G~l~~~~~~lK~~lk~~------Pi--~Gw~~~~~~fiFl 127 (346)
T KOG1505|consen 60 GDDVTGDK--YGKERALLIANHQSE-VDWLYLWTY-AQRKGVLGNVKIVLKKSLKYL------PI--FGWGMWFHGFIFL 127 (346)
T ss_pred eecccccc--cCCCceEEEeccccc-cchhhHHHH-HhcCCchhhhhHHHhhHHHhC------cc--hheeeeecceEEE
Confidence 44555553 667899999999964 588776633 333454 6777777777644 54 4447899999999
Q ss_pred cHHH---------HHHHhcC---CCeEEEecCchh
Q 005190 515 SGIN---------LYKLMSS---KSHVLLYPGGVR 537 (709)
Q Consensus 515 ~~~~---------~~~~L~~---g~~v~ifPeG~r 537 (709)
+|.- ..+.+++ -..+++||||||
T Consensus 128 ~R~~~~d~~~l~~~~k~l~~~~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 128 ERNWEKDEKTLISLLKHLKDSPDPYWLLLFPEGTR 162 (346)
T ss_pred ecchhhhHHHHHHHHHHhccCCCceEEEEecCCCc
Confidence 8832 2233332 468999999995
|
|
| >PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0038 Score=64.66 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=67.1
Q ss_pred CceeeccCCCC--CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HHhc
Q 005190 437 GKIVRGLSGIP--SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIMG 510 (709)
Q Consensus 437 ~~~~~g~e~ip--~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~~g 510 (709)
..++.|.|++. .++|+|+++=|. ..||.......+. .+..+..+..+.-. +.+-+++ ...|
T Consensus 94 ~~~~~g~~~~~~~~gkgvI~~t~H~-GnWEl~~~~~~~~--~~~~~~~vyr~~~n----------~~~d~~~~~~R~~~g 160 (293)
T PRK06946 94 LVQVDSAIDLTDPDGPPTIFLGLHF-VGIEAGSIWLNYS--LRRRVGSLYTPMSN----------PLLDAIAKAARGRFG 160 (293)
T ss_pred eEEEECHHHHHhcCCCCEEEEecch-hHHHHHHHHHHhc--ccCCceEEeeCCCC----------HHHHHHHHHHHHhcC
Confidence 34566666554 367999999996 2357755333211 12233334333211 1122222 2345
Q ss_pred CccccH----HHHHHHhcCCCeEEEecCchhhhhccCCccceec---cCCChhHHHHHHHcCCcEEEeeee
Q 005190 511 AVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 511 ~i~v~~----~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
..-++. ..+.++|++|+.|++.|.=.-. ...|-....+ -..-+|.++||.++|+||||+++.
T Consensus 161 ~~~i~~~~~~r~~~~~Lk~g~~v~~l~Dq~~~--~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~ 229 (293)
T PRK06946 161 AEMVSRADSARQVLRWLRDGKPVMLGADMDFG--LRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITE 229 (293)
T ss_pred CCccCCCchHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEE
Confidence 444433 3467788999999998543210 0001000100 022388999999999999999993
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.015 Score=57.08 Aligned_cols=93 Identities=18% Similarity=0.152 Sum_probs=64.3
Q ss_pred CEEEEeCCCCCCccc--HHHHHHHhc--CCceEEEEeCCCCC--CCCH---HHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 133 PLLLFLPGIDGVGLG--LIRQHQRLG--KIFDIWCLHIPVKD--RTSF---TGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~--~~~~~~~L~--~~~~Vi~~Dl~G~G--~Ss~---~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
-++|++||++.+... ...+.+.+. .|..|+++|. |-| .|.+ .+.++.+.+.+.... .+ .+-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~v~~m~-~l-sqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEKVKQMP-EL-SQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHHHhcch-hc-cCceEEEEEc
Confidence 359999999988776 777777774 6788999997 556 5544 444444444444321 12 3569999999
Q ss_pred hhHHHHHHHHHhCCCc-eeEEEEecC
Q 005190 204 LGACIALAVAARNPDI-DLVLILVNP 228 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~-v~~lVl~~p 228 (709)
.||.++-.++...++. |..+|-++.
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccC
Confidence 9999999999876543 666665543
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0018 Score=55.38 Aligned_cols=61 Identities=18% Similarity=0.258 Sum_probs=51.6
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
..|+|+|.++.|+.+|.+. ++.+++.+++++++.+++.||..+.....-+.+++. +|+..+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~-a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~--~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG-ARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVD--DYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHH-HHHHHHHCCCceEEEEeccCcceecCCChHHHHHHH--HHHHcC
Confidence 5899999999999999998 999999999999999999999999744445566666 455544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.005 Score=64.22 Aligned_cols=120 Identities=14% Similarity=0.101 Sum_probs=64.9
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHH----
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRI---- 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~---- 508 (709)
.+++.|.|++. .++|+|+++-|. ..||......... ..+..+..+.- + +.+-.++..
T Consensus 109 ~v~v~g~e~l~~a~~~gkgvI~~t~H~-GnWE~~~~~~~~~----~~~~~vyr~~~--n--------~~~d~~i~~~R~~ 173 (306)
T PRK08733 109 GVQIEGLEHLQQLQQQGRGVLLVSGHF-MTLEMCGRLLCDH----VPLAGMYRRHR--N--------PVFEWAVKRGRLR 173 (306)
T ss_pred cEEEeCHHHHHHHHhCCCCEEEEecCc-hHHHHHHHHHHcc----CCceEEEeCCC--C--------HHHHHHHHHHHhh
Confidence 45677776653 367999999996 2357754333211 12222222211 1 112222322
Q ss_pred hcCccccH---HHHHHHhcCCCeEEEecCchhhhhccCCccceec---cCCChhHHHHHHHcCCcEEEeee
Q 005190 509 MGAVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGA 573 (709)
Q Consensus 509 ~g~i~v~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~G~~~lA~~~~~pIvPv~~ 573 (709)
.|.--+++ ..+.++|++|+.|++.+.=.-. ...|-..+.+ -..-+|.++||.++|+||||+++
T Consensus 174 ~g~~~i~~~~~r~~~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~ 242 (306)
T PRK08733 174 YATHMFANEDLRATIKHLKRGGFLWYAPDQDMR--GKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFH 242 (306)
T ss_pred cCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEE
Confidence 23222223 4567889999999998542100 0001101111 02238899999999999999999
|
|
| >TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0065 Score=63.37 Aligned_cols=122 Identities=15% Similarity=0.065 Sum_probs=65.6
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH----H
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----I 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~----~ 508 (709)
.+++.|.|++. .++|+|+++=|. ..+|........ .+.++..+..+.-- +.+-.++. .
T Consensus 105 ~~~i~g~e~l~~~~~~gkgvi~~t~H~-gnwE~~~~~~~~---~~~~~~~v~r~~~n----------~~~d~~~~~~R~~ 170 (305)
T TIGR02208 105 RVNLMGLEHIEAAQAAGKPVIFLVPHG-WAIDYAGLRLAS---QGLPMVTMFNNHKN----------PLFDWLWNRVRSR 170 (305)
T ss_pred ceEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHh---cCCCceEEeeCCCC----------HHHHHHHHHHHhc
Confidence 45677777654 367999999995 345654433321 22333333322211 11222222 2
Q ss_pred hcCccccH----HHHHHHhcCCCeEEEecCchhhhhccCCccceecc---CCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MGAVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW---PESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g~i~v~~----~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~---~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.|.--+.. ..+.++|++|+.|++.+.=.-. ...|-....+. ..-+|.++||.++|+||||+++.
T Consensus 171 ~g~~~i~~~~~~r~i~~aLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~ 241 (305)
T TIGR02208 171 FGGHVYAREAGIKALLASLKRGESGYYLPDEDHG--PEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPG 241 (305)
T ss_pred CCCceecChhhHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEE
Confidence 33322322 3467788999999998533210 00011111110 12378899999999999999993
|
This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars. |
| >PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0047 Score=64.50 Aligned_cols=121 Identities=19% Similarity=0.107 Sum_probs=67.3
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH----H
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----I 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~----~ 508 (709)
.+++.|.|++- .++|+|+++=|. ..||........ .+ ++..+..+.-- +.+-.++. .
T Consensus 109 ~v~i~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~~~~---~~-~~~~vyr~~~n----------~~~d~~~~~~R~~ 173 (309)
T PRK06860 109 WTEVEGLEHIREVQAQGRGVLLVGVHF-LTLELGARIFGM---HN-PGIGVYRPNDN----------PLYDWLQTWGRLR 173 (309)
T ss_pred eEEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHc---cC-CCeEEeeCCCC----------HHHHHHHHHHHhh
Confidence 45677777653 367999999996 235775533332 12 23333322111 11222221 2
Q ss_pred hcCccccH---HHHHHHhcCCCeEEEecCchhhhhccCCccceecc----CCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MGAVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW----PESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g~i~v~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~----~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.|..-++. ..+.++|++|+.|++-+.-.-. ...+.....+- ..-+|.++||.++|+||||+++.
T Consensus 174 ~g~~~i~~~~~r~~~k~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~ 244 (309)
T PRK06860 174 SNKSMLDRKDLKGMIKALKKGERIWYAPDHDYG--PRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPR 244 (309)
T ss_pred cCCcCcCcccHHHHHHHHhcCCeEEEeCCCCCC--CCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEE
Confidence 34333333 3467788999999998643210 00011111111 23478999999999999999994
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0074 Score=54.68 Aligned_cols=86 Identities=21% Similarity=0.213 Sum_probs=61.6
Q ss_pred EEEeCCCCCCcccHHHHH--HHhcCCc---eEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 135 LLFLPGIDGVGLGLIRQH--QRLGKIF---DIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 135 Vv~lHG~~~s~~~~~~~~--~~L~~~~---~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
||++||+.+|..+..... +.+.+.. ...++.+| .+..+.++.+..++.. .+.+...|+|-|+||..|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~----h~p~~a~~ele~~i~~----~~~~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP----HDPQQALKELEKAVQE----LGDESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC----CCHHHHHHHHHHHHHH----cCCCCceEEeecchHHHH
Confidence 899999999988877633 3444333 33334443 2677888888888877 555568999999999999
Q ss_pred HHHHHhCCCceeEEEEecCCCC
Q 005190 210 LAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 210 l~~A~~~P~~v~~lVl~~p~~~ 231 (709)
..++.++. ++ .|++||+..
T Consensus 74 t~l~~~~G--ir-av~~NPav~ 92 (191)
T COG3150 74 TWLGFLCG--IR-AVVFNPAVR 92 (191)
T ss_pred HHHHHHhC--Ch-hhhcCCCcC
Confidence 99998864 33 466788554
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0093 Score=60.35 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=63.3
Q ss_pred CCEEEEeCCCC--CCcccHHHHHHHhc--CCceEEEEeCCCCCC-CCH-HHHHHHHHHHHHHhhc--cCCCCCEEEEEec
Q 005190 132 SPLLLFLPGID--GVGLGLIRQHQRLG--KIFDIWCLHIPVKDR-TSF-TGLVKLVESTVRSESN--RSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~--~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~-Ss~-~~~~~dl~~~l~~~~~--~~~~~~v~LvGhS 203 (709)
..+||+.||++ .+...+..+.+.+. .++.+.++. .|-|. +++ ..+.+.+..+.+++.. .+ ..-+.++|+|
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~~~~~Qv~~vce~l~~~~~L-~~G~naIGfS 103 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFMPLRQQASIACEKIKQMKEL-SEGYNIVAES 103 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccccccCHHHHHHHHHHHHhcchhh-cCceEEEEEc
Confidence 34699999999 55557777777774 355555554 34454 233 3333444444444333 22 2459999999
Q ss_pred hhHHHHHHHHHhCCC--ceeEEEEecC
Q 005190 204 LGACIALAVAARNPD--IDLVLILVNP 228 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~--~v~~lVl~~p 228 (709)
.||.++-.++.+.|+ .|..+|-++.
T Consensus 104 QGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 104 QGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred chhHHHHHHHHHCCCCCCcceEEEecC
Confidence 999999999999987 4888888765
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.071 Score=57.76 Aligned_cols=110 Identities=23% Similarity=0.181 Sum_probs=71.8
Q ss_pred ccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-------------------CCceEEEEeCC-CCCCC----------
Q 005190 123 LECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-------------------KIFDIWCLHIP-VKDRT---------- 172 (709)
Q Consensus 123 ~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-------------------~~~~Vi~~Dl~-G~G~S---------- 172 (709)
.+........|+||.|-|.+|++..- .+..++. +..+++-+|.| |-|.|
T Consensus 64 ~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~ 142 (454)
T KOG1282|consen 64 FESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT 142 (454)
T ss_pred EEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC
Confidence 34333234688999999998887655 3333321 23578899976 66777
Q ss_pred CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHHh----C-----C-CceeEEEEecCCCCcc
Q 005190 173 SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----N-----P-DIDLVLILVNPATSFN 233 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~---~~~v~LvGhS~GG~iAl~~A~~----~-----P-~~v~~lVl~~p~~~~~ 233 (709)
+-+..++|.-.++.....+.+ .++++|.|.|++|..+-.+|.. + | -.++|+++-+|.....
T Consensus 143 ~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 143 GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPE 216 (454)
T ss_pred CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCcc
Confidence 224455665555555444443 6899999999999777666653 2 1 2488999988866543
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0076 Score=65.83 Aligned_cols=116 Identities=20% Similarity=0.214 Sum_probs=73.3
Q ss_pred CCCC-CcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh---cCCceEEEEeCCCCCCC---------------C
Q 005190 113 GGGP-PRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL---GKIFDIWCLHIPVKDRT---------------S 173 (709)
Q Consensus 113 ~g~~-~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L---~~~~~Vi~~Dl~G~G~S---------------s 173 (709)
||.. |-++.|...-+-..+.|.+|+.+|.-+-+..-..-...+ ..|+-+...|.||-|.- +
T Consensus 450 DGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~ 529 (712)
T KOG2237|consen 450 DGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNS 529 (712)
T ss_pred CCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhccc
Confidence 6654 455555433221225776666666544332211122222 35666666799998754 5
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
++|+...+..+++. .-....+..+.|.|.||.++.+++.++|+++.++|+--|..
T Consensus 530 f~Dfia~AeyLve~--gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 530 FDDFIACAEYLVEN--GYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred HHHHHHHHHHHHHc--CCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 56666666666654 12235689999999999999999999999998888765543
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.056 Score=62.80 Aligned_cols=90 Identities=29% Similarity=0.451 Sum_probs=63.4
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
...|+++|+|.+-+....+..++..|. .|.||.- ++++.+.. .+++++...+..|..|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~---yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAY---YIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHH---HHHHHHhcCCCCCeeeec
Confidence 357789999998887777777777663 3444432 44555544 455555556778999999
Q ss_pred echhHHHHHHHHHhCC--CceeEEEEecCCCC
Q 005190 202 ESLGACIALAVAARNP--DIDLVLILVNPATS 231 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P--~~v~~lVl~~p~~~ 231 (709)
+|+|++++..+|.... +....+|+++....
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999987642 33455888887544
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0094 Score=56.02 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=68.3
Q ss_pred CCCEEEEeCCCCCCcccHHH--HHHHh--cCCceEEEEeC--CCC---C--CC-------------CHHH----------
Q 005190 131 DSPLLLFLPGIDGVGLGLIR--QHQRL--GKIFDIWCLHI--PVK---D--RT-------------SFTG---------- 176 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~--~~~~L--~~~~~Vi~~Dl--~G~---G--~S-------------s~~~---------- 176 (709)
.-|++.++-|+..+...|.. -.+.. ..++.|+.+|- ||. | +| +.+-
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 37899999999998887754 22222 25788888884 443 1 22 1122
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh
Q 005190 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV 236 (709)
Q Consensus 177 ~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~ 236 (709)
..+.+.++++.........++.+.||||||.=|+..+.++|.+.+++-..+|......-+
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP 182 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc
Confidence 223344444322222334579999999999999999999999988777766655443333
|
|
| >PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.02 Score=62.33 Aligned_cols=109 Identities=10% Similarity=0.034 Sum_probs=61.4
Q ss_pred CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HHhcCccc-cH---HHH
Q 005190 448 SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIMGAVPV-SG---INL 519 (709)
Q Consensus 448 ~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~~g~i~v-~~---~~~ 519 (709)
.++|+|+++=|. ..||....... .+.++..+..+.-- +.+-.++ ...|+--+ ++ ..+
T Consensus 138 ~gkGvIllt~H~-GNWEl~~~~l~----~~~p~~~vyRp~kN----------p~ld~li~~~R~r~G~~lI~~~~giR~l 202 (454)
T PRK05906 138 EQEGAILFCGHQ-ANWELPFLYIT----KRYPGLAFAKPIKN----------RRLNKKIFSLRESFKGKIVPPKNGINQA 202 (454)
T ss_pred CCCCEEEEeehh-hHHHHHHHHHH----cCCCeEEEEecCCC----------HHHHHHHHHHHHhcCCeeecCchHHHHH
Confidence 467999999996 23577443222 12334444443221 1122222 33444333 22 346
Q ss_pred HHHhcCCCeEEEecCchhhhhccCCccceec---cCCChhHHHHHHHcCCcEEEeeee
Q 005190 520 YKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 520 ~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.++|++|+.|++.|.-.-. ..|.....+ -..-+|.++||.++|+||||+++.
T Consensus 203 iraLk~G~~vgiL~DQ~~~---~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~ 257 (454)
T PRK05906 203 LRALHQGEVVGIVGDQALL---SSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIY 257 (454)
T ss_pred HHHHhcCCEEEEEeCCCCC---CCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 7789999999999754310 001111110 022389999999999999999993
|
|
| >TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.013 Score=61.12 Aligned_cols=121 Identities=16% Similarity=0.089 Sum_probs=65.9
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HH
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RI 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~ 508 (709)
.+++.|.|++- .++++|+++=|. ..+|......... .....+..+.- + +.+..++ ..
T Consensus 103 ~v~i~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~~~~~----~~~~~vyr~~~--n--------~~~d~l~~~~R~~ 167 (303)
T TIGR02207 103 WMQIEGLEHLQRAQKQGRGVLLVGVHF-LTLELGARIFGQQ----QPGIGVYRPHN--N--------PLFDWIQTRGRLR 167 (303)
T ss_pred cEEEECHHHHHHHHhcCCCEEEEecch-hHHHHHHHHHHcc----CCCeEEEeCCC--C--------HHHHHHHHHHHHh
Confidence 45677777653 367999999996 3457754333311 11222222111 1 1122222 22
Q ss_pred hcCccccH---HHHHHHhcCCCeEEEecCchhhhhccCCccceec----cCCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MGAVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF----WPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g~i~v~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~----~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.|.-.+++ ..+.++|++|+.|+|-+.-.-. ...+.....+ -..-.|.++||.++|+||||+++.
T Consensus 168 ~g~~~i~~~~~r~i~~~Lk~g~~v~il~Dq~~~--~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~ 238 (303)
T TIGR02207 168 SNKAMIDRKDLRGMIKALKNGERIWYAPDHDYG--RKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPR 238 (303)
T ss_pred cCCcccCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEE
Confidence 33222333 3467788999999998742210 0001111111 123469999999999999999994
|
This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0049 Score=57.12 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC----ceeEEEEecCCCC
Q 005190 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD----IDLVLILVNPATS 231 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~ 231 (709)
..+.+.+...++......+..+++++|||+||.+|..++..... ....++..+++..
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 44556666666665555678899999999999999999887754 4555666666443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.028 Score=62.09 Aligned_cols=117 Identities=21% Similarity=0.236 Sum_probs=76.3
Q ss_pred CCCC-CcccccccCCCCCCCCCEEEEeCCCCCCcc--cHHHHH-HHhcCCceEEEEeCCCCCCC---------------C
Q 005190 113 GGGP-PRWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQH-QRLGKIFDIWCLHIPVKDRT---------------S 173 (709)
Q Consensus 113 ~g~~-~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~--~~~~~~-~~L~~~~~Vi~~Dl~G~G~S---------------s 173 (709)
||.. |.-+.|+..-....++|++|+--|.-|... .|.... ..|.+|+-.-....||-|.- +
T Consensus 428 dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NT 507 (682)
T COG1770 428 DGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNT 507 (682)
T ss_pred CCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhcccc
Confidence 4433 455555533122235788888777765554 233222 22235655555577887654 6
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+.|+.+....+++. .....+.++++|-|.||++...+|...|+.++++|+--|...
T Consensus 508 f~DFIa~a~~Lv~~--g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 508 FTDFIAAARHLVKE--GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHHHHHHHHc--CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 67777777766655 222345799999999999999999999999999998777544
|
|
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.019 Score=60.94 Aligned_cols=109 Identities=18% Similarity=0.193 Sum_probs=75.5
Q ss_pred CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHH-----------
Q 005190 449 EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI----------- 517 (709)
Q Consensus 449 ~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~----------- 517 (709)
.-|.||+.-|.+- +|-+++... ....++..-.+|.-.-.++ |+++++++.+|+..+.|+
T Consensus 157 g~PliFlPlHRSH-lDYlliTwI-L~~~~Ik~P~iAsGNNLnI--------P~Fg~Llr~LGaFFIrRriDp~~~G~KDV 226 (715)
T KOG3729|consen 157 GIPMVFLPLHRSH-LDYLLITWI-LWHFGIKLPHIASGNNLNI--------PGFGWLLRALGAFFIRRRVDPDDEGGKDV 226 (715)
T ss_pred CCceEEEecchhh-hhHHHHHHH-HHhcCcCCceeccCCcccc--------chHHHHHHhcchheeeeccCCCcccchhH
Confidence 4589999999953 677555443 3445665555555544444 558889999999998772
Q ss_pred --------HHHHHhcCCCeEEEecCchhhhhccCCccceeccCCChhH---HHHHHHcC----CcEEEeeee
Q 005190 518 --------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEF---VRMATTFG----AKIVPFGAV 574 (709)
Q Consensus 518 --------~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~---~~lA~~~~----~pIvPv~~~ 574 (709)
...++|++|..|=+|-||||+..+ +. . -.|.|. +-=|..+| +-||||.+.
T Consensus 227 LYRA~LH~yi~~~L~Q~~~iEfFlEGtRsR~G---K~---~-~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~ 291 (715)
T KOG3729|consen 227 LYRAILHSYIEQVLSQDMPIEFFLEGTRSRFG---KA---L-TPKNGLLSVVVEAVQHGFIPDCLLVPVSYT 291 (715)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeccccccC---Cc---C-CcccccHHHHHHHHhcCCCCceEEEeeecc
Confidence 256789999999999999996443 21 1 335564 34466665 579999984
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.025 Score=58.84 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=70.1
Q ss_pred CCEEEEeCCCCCCcc---cHHHHHHHh-cCCceEEEEeCCC--CCCC--------------------C------------
Q 005190 132 SPLLLFLPGIDGVGL---GLIRQHQRL-GKIFDIWCLHIPV--KDRT--------------------S------------ 173 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~---~~~~~~~~L-~~~~~Vi~~Dl~G--~G~S--------------------s------------ 173 (709)
.-.||++||.+.+.. ....+...| ..|+..+++.+|. .... .
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 347999999988764 445566677 4789999998887 1100 0
Q ss_pred ------HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC-ceeEEEEecCCCC
Q 005190 174 ------FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATS 231 (709)
Q Consensus 174 ------~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~-~v~~lVl~~p~~~ 231 (709)
.+.+...+.+.+..... .+..+++|+||+.|+..++.+.+..+. .++++|++++..+
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 12344445555555443 445669999999999999999998864 4899999999544
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.015 Score=60.64 Aligned_cols=119 Identities=14% Similarity=0.006 Sum_probs=66.0
Q ss_pred eeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH----Hhc
Q 005190 439 IVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----IMG 510 (709)
Q Consensus 439 ~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~----~~g 510 (709)
++.|.|++- .++++|+++=|. ..||........ ..++..+..+.-- +.+-.++. ..|
T Consensus 98 ~~~g~e~l~~~~~~gkgvI~lt~H~-GnwE~~~~~~~~----~~~~~~vyr~~~n----------~~~d~~~~~~R~~~g 162 (305)
T PRK08734 98 QRHGQELYDAALASGRGVIVAAPHF-GNWELLNQWLSE----RGPIAIVYRPPES----------EAVDGFLQLVRGGDN 162 (305)
T ss_pred EecCHHHHHHHHHcCCCEEEEcccc-chHHHHHHHHHc----cCCceEEEeCCCC----------HHHHHHHHHHhccCC
Confidence 567777654 357999999996 235775433331 1223333332211 11323332 334
Q ss_pred Cccc--cH---HHHHHHhcCCCeEEEecCchhhhhccCCcccee---ccCCChhHHHHHHHcCCcEEEeeee
Q 005190 511 AVPV--SG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKL---FWPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 511 ~i~v--~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l---~~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
...+ ++ ..+.++|++|+.|++.+.=.-. ...|..-.. .-..-+|.++||.++|+||||+++.
T Consensus 163 ~~~i~~~~~~~r~li~~Lk~g~~v~~l~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~ 232 (305)
T PRK08734 163 VRQVRAEGPAVRQLFKVLKDGGAVGILPDQQPK--MGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCE 232 (305)
T ss_pred CeeecCCchhHHHHHHHHhcCCeEEEeCCCCCC--CCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 3333 22 4577889999999998533210 000110010 1133489999999999999999993
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.011 Score=61.23 Aligned_cols=95 Identities=14% Similarity=0.048 Sum_probs=73.4
Q ss_pred EEEEeCCCCCCcccHHH---HHHHhc--CCceEEEEeCCCCCCC-----------------CHHHHHHHHHHHHHHhhcc
Q 005190 134 LLLFLPGIDGVGLGLIR---QHQRLG--KIFDIWCLHIPVKDRT-----------------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~~---~~~~L~--~~~~Vi~~Dl~G~G~S-----------------s~~~~~~dl~~~l~~~~~~ 191 (709)
+|+|--|.-|+-+.|.. +.-.++ .+.-++..+.|-+|+| +.++-..|...++..++..
T Consensus 82 PIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~ 161 (492)
T KOG2183|consen 82 PIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD 161 (492)
T ss_pred ceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc
Confidence 48999998887776665 222332 2466888899999998 4477778888888887765
Q ss_pred CC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 192 SP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 192 ~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
.. ..+|+.+|.|+||++|..+=.+||+.+.|.+..+.
T Consensus 162 ~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 162 LSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred cccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 32 46899999999999999999999999988776544
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.025 Score=56.81 Aligned_cols=93 Identities=14% Similarity=0.076 Sum_probs=51.1
Q ss_pred CEEEEeCCCCCCc---ccHHHHHHHh---cCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCE
Q 005190 133 PLLLFLPGIDGVG---LGLIRQHQRL---GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPV 197 (709)
Q Consensus 133 p~Vv~lHG~~~s~---~~~~~~~~~L---~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~~~~~~~v 197 (709)
.+||+.||++.+. ..+..+.+.+ -.|.-|.++++ |.+.+ ...+.++.+.+.+..... + ..-+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~-L-~~G~ 82 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPE-L-ANGF 82 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG-G-TT-E
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChh-h-hcce
Confidence 3699999998754 3455554444 36778888887 33321 223333444444443221 2 2469
Q ss_pred EEEEechhHHHHHHHHHhCCC-ceeEEEEecC
Q 005190 198 YLVGESLGACIALAVAARNPD-IDLVLILVNP 228 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~-~v~~lVl~~p 228 (709)
+++|+|.||.++-.++.++|+ .|.-+|-++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 999999999999999999875 4888888765
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.014 Score=62.89 Aligned_cols=83 Identities=11% Similarity=0.146 Sum_probs=61.2
Q ss_pred cHHHHHHHhc-CCc----eEEE--EeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC-
Q 005190 147 GLIRQHQRLG-KIF----DIWC--LHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD- 218 (709)
Q Consensus 147 ~~~~~~~~L~-~~~----~Vi~--~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~- 218 (709)
.|..+++.|. .|| .+.+ +|+|---. ..+++...+...++...... .++++|+||||||.++..+....+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 7888999985 333 2332 57764222 34577777888888776666 7899999999999999998888743
Q ss_pred -----ceeEEEEecCCCC
Q 005190 219 -----IDLVLILVNPATS 231 (709)
Q Consensus 219 -----~v~~lVl~~p~~~ 231 (709)
.|+++|.++++..
T Consensus 144 ~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPFG 161 (389)
T ss_pred hhHHhhhhEEEEeCCCCC
Confidence 4899999987554
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.019 Score=59.84 Aligned_cols=121 Identities=13% Similarity=0.058 Sum_probs=66.7
Q ss_pred CceeeccCCCC----CCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHH----H
Q 005190 437 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----I 508 (709)
Q Consensus 437 ~~~~~g~e~ip----~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~----~ 508 (709)
.+++.|.|++- .++++|+++=|. ..||........ . .++..+..+.-- +.+..++. .
T Consensus 107 ~v~~~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~l~~--~--~~~~~vyr~~~n----------~~~d~~~~~~R~~ 171 (305)
T PRK08025 107 WFDVEGLDNLKRAQMQNRGVMVVGVHF-MSLELGGRVMGL--C--QPMMATYRPHNN----------KLMEWVQTRGRMR 171 (305)
T ss_pred eEEEECHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHc--c--CCCeEEEeCCCC----------HHHHHHHHHHHhc
Confidence 45677777654 367999999996 235775543331 1 222233222111 11222322 2
Q ss_pred hcCccccH---HHHHHHhcCCCeEEEecCchhhhhccCCccceecc----CCChhHHHHHHHcCCcEEEeeee
Q 005190 509 MGAVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW----PESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 509 ~g~i~v~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~----~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.|.-.+++ ..+.++|++|+.|++-|.=.-. ...+.....+. ..-+|.++||.++|+||||+++.
T Consensus 172 ~g~~~i~~~~~r~~~~aLk~g~~v~il~DQ~~~--~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~ 242 (305)
T PRK08025 172 SNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYG--PKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMV 242 (305)
T ss_pred cCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEE
Confidence 34333333 3467789999999999532100 00011112111 12478899999999999999994
|
|
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.018 Score=60.17 Aligned_cols=110 Identities=22% Similarity=0.267 Sum_probs=80.3
Q ss_pred CCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccH------------
Q 005190 449 EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG------------ 516 (709)
Q Consensus 449 ~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~------------ 516 (709)
+-|+|+...|.++ +|.+++...+. ..++.+-++|.-+=|..- .+.+.+++..|+....|
T Consensus 149 k~pV~~lPSHrsY-~DFlllS~icy-~YDi~iP~IAAGmDF~sM-------k~mg~~LR~sGAFFMRRsFg~d~LYWaVF 219 (685)
T KOG3730|consen 149 KCPVLYLPSHRSY-MDFLLLSYICY-YYDIEIPGIAAGMDFHSM-------KGMGTMLRKSGAFFMRRSFGNDELYWAVF 219 (685)
T ss_pred cCCEEEeccchhH-HHHHHHHHHHH-hccCCCchhhcccchHhh-------hHHHHHHHhcccceeeeccCCceehHHHH
Confidence 4699999999987 68866655544 467777777776655321 23778899999999887
Q ss_pred -HHHHHHhcCC-CeEEEecCchhhhhccCCccceeccCCChhHHHHHHHc-------CCcEEEeeee
Q 005190 517 -INLYKLMSSK-SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVPFGAV 574 (709)
Q Consensus 517 -~~~~~~L~~g-~~v~ifPeG~r~~~~~~~~~~~l~~~~k~G~~~lA~~~-------~~pIvPv~~~ 574 (709)
+..+.+++++ ..|=.|-||||+.. .+-+ -.|-|...|+++- .+-||||.+.
T Consensus 220 sEYv~t~v~N~~~~VEFFiEgTRSR~------~K~L-~PK~GlL~mvlePyf~geV~Dv~iVPVSv~ 279 (685)
T KOG3730|consen 220 SEYVYTLVANYHIGVEFFIEGTRSRN------FKAL-VPKIGLLSMVLEPYFTGEVPDVMIVPVSVA 279 (685)
T ss_pred HHHHHHHHhcCCCceEEEEeeccccc------cccc-CcchhhHHHHHhhhhcCCcCceEEEEeeec
Confidence 3356677777 46889999999633 2222 4578999999874 6789999984
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.011 Score=66.38 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=59.8
Q ss_pred CCCCEEEEeCCCC---CCcccHHHHHHHh-c-C-CceEEEEeCC-C---CCCC-----CHHHHHHHHHHHHHHhhcc---
Q 005190 130 RDSPLLLFLPGID---GVGLGLIRQHQRL-G-K-IFDIWCLHIP-V---KDRT-----SFTGLVKLVESTVRSESNR--- 191 (709)
Q Consensus 130 ~~~p~Vv~lHG~~---~s~~~~~~~~~~L-~-~-~~~Vi~~Dl~-G---~G~S-----s~~~~~~dl~~~l~~~~~~--- 191 (709)
+..|+||++||.+ ++...+ ....| . . ++-|+.+++| | +..+ +...-..|...+++.++..
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 3578999999953 222222 12223 1 2 3889999988 3 2221 1112234555555444432
Q ss_pred --CCCCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 005190 192 --SPKRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (709)
Q Consensus 192 --~~~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~ 230 (709)
....+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 234689999999999999887765 245688888876543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.052 Score=51.10 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=66.8
Q ss_pred CCCCCCCCEEEEeCCCCCCcccHHH--------HHHHh-------cCCceEEE-----EeCC-CCCCC-----CHHHHHH
Q 005190 126 GSHTRDSPLLLFLPGIDGVGLGLIR--------QHQRL-------GKIFDIWC-----LHIP-VKDRT-----SFTGLVK 179 (709)
Q Consensus 126 g~p~~~~p~Vv~lHG~~~s~~~~~~--------~~~~L-------~~~~~Vi~-----~Dl~-G~G~S-----s~~~~~~ 179 (709)
|++.....+.++++|.+.+...... +...+ ..+-.+-+ +|-| +...+ -.+.-+.
T Consensus 13 GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~ 92 (177)
T PF06259_consen 13 GDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAP 92 (177)
T ss_pred CCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHH
Confidence 5544445689999999876643221 11111 12223333 3555 11111 2256667
Q ss_pred HHHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 180 LVESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 180 dl~~~l~~~~~~~-~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
++..+++.++... +...+.++|||+|+.++-..+...+..+.-+|+++++
T Consensus 93 ~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 93 RLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 7888888887766 6678999999999999998887767778888887653
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.038 Score=56.92 Aligned_cols=52 Identities=19% Similarity=0.310 Sum_probs=40.3
Q ss_pred cccCC-ccEEEEeeCCCCCCCcHHHHHHHHhhcCC--cEEEEEcCCCccccccChh
Q 005190 328 LHAVK-AQMLVLCSGKDQLMPSQEEGERLSSALHK--CEPRNFYGHGHFLLLEDGV 380 (709)
Q Consensus 328 l~~i~-~PvLvi~G~~D~~v~~~~~~~~l~~~~~~--~~~~~i~~aGH~~~le~p~ 380 (709)
+..+. +|+|+++|.+|..+|... +..+.+...+ .+...+++++|......+.
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 281 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRD-AEDLYEAARERPKKLLFVPGGGHIDLYDNPP 281 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhh-hHHHHhhhccCCceEEEecCCccccccCccH
Confidence 34454 799999999999999997 7766665544 6778889999998875444
|
|
| >PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.022 Score=58.90 Aligned_cols=119 Identities=15% Similarity=0.076 Sum_probs=63.7
Q ss_pred eeeccCCC----CCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHH----HHhc
Q 005190 439 IVRGLSGI----PSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIMG 510 (709)
Q Consensus 439 ~~~g~e~i----p~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~----~~~g 510 (709)
++.|.|++ -.++++|+++-|. ..||......... .++..++.+.-- +.+..++ ...|
T Consensus 86 ~~~g~e~l~~a~~~gkgvIllt~H~-GnwE~~~~~~~~~----~~~~~v~r~~~n----------~~~~~~~~~~R~~~g 150 (289)
T PRK08905 86 DDHGWEHVEAALAEGRGILFLTPHL-GCFEVTARYIAQR----FPLTAMFRPPRK----------AALRPLMEAGRARGN 150 (289)
T ss_pred eecCHHHHHHHHhcCCCEEEEeccc-chHHHHHHHHHhc----CCceEEEECCCC----------HHHHHHHHHHhcccC
Confidence 34554444 3367999999996 2357654333311 233444433211 1122222 2233
Q ss_pred --CccccH---HHHHHHhcCCCeEEEecCchhhhhccCCcccee---ccCCChhHHHHHHHcCCcEEEeeee
Q 005190 511 --AVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKL---FWPESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 511 --~i~v~~---~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l---~~~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
.++.++ ..+.++|++|+.|++.+.-.-. ...|..... .-.+-.|.++||.++|+||||+++.
T Consensus 151 ~~~i~~~~~~~~~i~~aLk~g~~v~il~Dq~~~--~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~ 220 (289)
T PRK08905 151 MRTAPATPQGVRMLVKALRRGEAVGILPDQVPS--GGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGE 220 (289)
T ss_pred CceeccCCccHHHHHHHHhcCCeEEEcCCCCCC--CCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEE
Confidence 232222 3577889999999998432100 000111111 1133489999999999999999993
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.061 Score=54.61 Aligned_cols=94 Identities=18% Similarity=0.106 Sum_probs=62.0
Q ss_pred CCEEEEeCCCCCCcc--cHHHHHHHhc--CCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 132 SPLLLFLPGIDGVGL--GLIRQHQRLG--KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~--~~~~~~~~L~--~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
..++|+.||+|.+.. ....+.+.+. .|..++++.. |-+.. ...+.++.+.+.+..... + ..-++++|+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~~~~~~~Qve~vce~l~~~~~-l-~~G~naIGf 101 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVGDSWLMPLTQQAEIACEKVKQMKE-L-SQGYNIVGR 101 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCccccceeCHHHHHHHHHHHHhhchh-h-hCcEEEEEE
Confidence 345999999988765 3444444443 3566666655 33221 445555555555544222 2 235999999
Q ss_pred chhHHHHHHHHHhCCC--ceeEEEEecC
Q 005190 203 SLGACIALAVAARNPD--IDLVLILVNP 228 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~--~v~~lVl~~p 228 (709)
|.||.++-.++.+.|+ .|..+|-++.
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 9999999999999987 4888888765
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.06 Score=56.73 Aligned_cols=55 Identities=15% Similarity=0.180 Sum_probs=44.1
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 329 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 329 ~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
.++++|.++|.|..|.+..++. ...+...+| ...+..+|+++|..-. ..+.+.|.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~-~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~ 314 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDS-SNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLR 314 (367)
T ss_pred HhcCccEEEEecCCCceeccCc-hHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHH
Confidence 5668999999999999999987 777777666 5678889999999887 44555555
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.096 Score=60.82 Aligned_cols=102 Identities=13% Similarity=-0.019 Sum_probs=60.2
Q ss_pred CCCCCeEEEeccccchhhHHhhHHHHHHHhcceEeeeccccccccccCCCCCCCChHHHHHHhcCcccc---------HH
Q 005190 447 PSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS---------GI 517 (709)
Q Consensus 447 p~~~p~i~v~NH~~~~~d~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~---------~~ 517 (709)
-.++|+|+++=|. ..|+........ .+.++..+..+.-. ++ ...|.-.++ -.
T Consensus 476 ~~~kgvi~~t~H~-gnwE~~~~~~~~---~~~~~~~i~r~~~~------------~R---~~~g~~~i~~~~~~~~~~~r 536 (656)
T PRK15174 476 LDQRGCIIVSAHL-GAMYAGPMILSL---LEMNSKWVASTPGV------------LK---GGYGERLISVSDKSEADVVR 536 (656)
T ss_pred hcCCCEEEEecCc-chhhHHHHHHHH---cCCCceeeecchHH------------HH---HhcCCceeccCCCCcchHHH
Confidence 3467999999996 234765544331 23333333332211 22 344433331 23
Q ss_pred HHHHHhcCCCeEEEecCch------hhhhccCCccceeccCCChhHHHHHHHcCCcEEEeee
Q 005190 518 NLYKLMSSKSHVLLYPGGV------REALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 573 (709)
Q Consensus 518 ~~~~~L~~g~~v~ifPeG~------r~~~~~~~~~~~l~~~~k~G~~~lA~~~~~pIvPv~~ 573 (709)
.+.++|++|+.|+|.|--. .-.+. |. .-.+-.|.++||.++|+||||+++
T Consensus 537 ~i~~aLk~g~~v~il~Dq~~~~~~~~v~Ff--G~----~a~~~~g~~~lA~~~~~pvv~~~~ 592 (656)
T PRK15174 537 ACMQTLHSGQSLVVAIDGALNLSAPTIDFF--GQ----QITYSTFCSRLAWKMHLPTVFSVP 592 (656)
T ss_pred HHHHHHHcCCeEEEEeCCCCCCCCceeccC--CC----ccCcCcHHHHHHHHHCCCEEEeEE
Confidence 5778899999999994332 11111 11 114458999999999999999999
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.083 Score=49.84 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCEEEEeCCCCCCc-ccHHH----------------HHHHhcCCceEEEEeCCCC---CCC------CHHHHHHHHHHHH
Q 005190 132 SPLLLFLPGIDGVG-LGLIR----------------QHQRLGKIFDIWCLHIPVK---DRT------SFTGLVKLVESTV 185 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~-~~~~~----------------~~~~L~~~~~Vi~~Dl~G~---G~S------s~~~~~~dl~~~l 185 (709)
...+|++||.|--. ..|.. +-++.+.||.|+..+.--. -.+ -...-++.+..+.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 44899999987644 35654 1233357899998865311 111 0111222223333
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCC--ceeEEEEecCCCCc
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPD--IDLVLILVNPATSF 232 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~--~v~~lVl~~p~~~~ 232 (709)
..+........++++.||.||...+.+..++|+ .|.++.+.+.+.+.
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 332233445789999999999999999999975 47777787776544
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.077 Score=55.93 Aligned_cols=34 Identities=24% Similarity=0.154 Sum_probs=29.6
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
-|++++|+|.||.+|...|.-.|..+++++=-++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~ 217 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSS 217 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCc
Confidence 4899999999999999999999999987765444
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.02 Score=52.00 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 177 ~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
+.+.+.+.+..+....+..++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 334444444444444666789999999999999988875
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.023 Score=56.64 Aligned_cols=58 Identities=21% Similarity=0.272 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC-----CCceeEEEEecCCC
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN-----PDIDLVLILVNPAT 230 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~-----P~~v~~lVl~~p~~ 230 (709)
.+..+.+++...+.....+.+..++++.||||||.+|..+|... +..+..+.+.+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 44556666666666666667788999999999999999888753 33465555555533
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.097 Score=56.04 Aligned_cols=96 Identities=8% Similarity=0.124 Sum_probs=75.9
Q ss_pred CCCEEEEeCCCCCCcccH--------HHHHHHhcCCceEEEEeCCCCCCC--------------CHHHHHHHHHHHHHHh
Q 005190 131 DSPLLLFLPGIDGVGLGL--------IRQHQRLGKIFDIWCLHIPVKDRT--------------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~--------~~~~~~L~~~~~Vi~~Dl~G~G~S--------------s~~~~~~dl~~~l~~~ 188 (709)
++|..|+|-|=+.-...| ..+++.+ +..|+.++.|-+|.| +..+...|+..+|+++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 677888888865544333 3344444 678999999999977 5688889999999998
Q ss_pred hccCC---CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 189 SNRSP---KRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 189 ~~~~~---~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
..+.+ ..|.+..|.|+-|.+++.+=.++|+.+.|.|..+.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 87663 23899999999999999999999999988877654
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.094 Score=52.06 Aligned_cols=42 Identities=21% Similarity=0.277 Sum_probs=36.8
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS 235 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~ 235 (709)
..+..++|||+||.+++.....+|+.+...++++|..+....
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~ 177 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNE 177 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCH
Confidence 456899999999999999999999999999999997765443
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.24 Score=52.04 Aligned_cols=103 Identities=17% Similarity=0.032 Sum_probs=78.5
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHH-HHHHHhcCCceEEEEeCCCCCCC----------CHHHHHHHHHHHHHHh
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLI-RQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~-~~~~~L~~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~~ 188 (709)
+...+.+. +.|+|+..-|++.+..-.. .....| +.+-+.+++|-+|.| ++.+-++|...+++.+
T Consensus 54 vtLlHk~~---drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~ 128 (448)
T PF05576_consen 54 VTLLHKDF---DRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAF 128 (448)
T ss_pred EEEEEcCC---CCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHH
Confidence 33344444 6899999999987654332 233333 356678889999988 6788899999999999
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEE-ecC
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLIL-VNP 228 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl-~~p 228 (709)
+..++ .+-+--|.|=||+.++.+=.-+|+.|.+.|. ++|
T Consensus 129 K~iY~-~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 129 KPIYP-GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred Hhhcc-CCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 88774 5799999999999999887888999998876 444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.082 Score=57.65 Aligned_cols=104 Identities=25% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHH----------------Hh-------cCCceEEEEe-CCCCCCC---------CHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQ----------------RL-------GKIFDIWCLH-IPVKDRT---------SFT 175 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~----------------~L-------~~~~~Vi~~D-l~G~G~S---------s~~ 175 (709)
....|+||.+-|.+|++..+..+.+ .+ .+..+++.+| ..|.|.| +-.
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 4468999999999887764433221 11 1347899999 6788888 111
Q ss_pred HHHHHHHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHh----C------CCceeEEEEecCCCCc
Q 005190 176 GLVKLVESTVRSESNRS---PKRPVYLVGESLGACIALAVAAR----N------PDIDLVLILVNPATSF 232 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~----~------P~~v~~lVl~~p~~~~ 232 (709)
+.++++..++....... ...+++|.|.|+||..+-.+|.. . +=.++|+++.++....
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 23345555555543333 35789999999999877777653 1 1247899998886543
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.12 Score=49.04 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=49.0
Q ss_pred CceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh--C----CCceeEEEEe
Q 005190 158 IFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR--N----PDIDLVLILV 226 (709)
Q Consensus 158 ~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~--~----P~~v~~lVl~ 226 (709)
...+..+++|-.... +...=+.++...++....+.+..+++|+|+|.|+.++..++.. . .++|.++++.
T Consensus 39 ~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlf 118 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLF 118 (179)
T ss_dssp EEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEE
T ss_pred eeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEe
Confidence 466777777765432 4455556666667666677999999999999999999999877 2 3558888887
Q ss_pred cCC
Q 005190 227 NPA 229 (709)
Q Consensus 227 ~p~ 229 (709)
+-+
T Consensus 119 GdP 121 (179)
T PF01083_consen 119 GDP 121 (179)
T ss_dssp S-T
T ss_pred cCC
Confidence 543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.18 Score=55.24 Aligned_cols=116 Identities=15% Similarity=0.104 Sum_probs=73.9
Q ss_pred CCCCCCcccccccCCCCCCCCCEEEEeCCCCCCcc--cHHHHHHH-hcCCceEEEEeCCCCCCC-----------CHHHH
Q 005190 112 SGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQR-LGKIFDIWCLHIPVKDRT-----------SFTGL 177 (709)
Q Consensus 112 ~~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~--~~~~~~~~-L~~~~~Vi~~Dl~G~G~S-----------s~~~~ 177 (709)
.||.++-++... .|.+.++.|++|+--|.-.-+. .|...... |.+|...+...+||-|+= .-+..
T Consensus 402 kDGT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~v 480 (648)
T COG1505 402 KDGTRIPYFIVR-KGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNV 480 (648)
T ss_pred CCCccccEEEEe-cCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhh
Confidence 377775555554 5533346777766555433222 34444433 367888888899998765 22344
Q ss_pred HHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 178 VKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
.+|..++.+.+..+.- .+++-+.|-|=||.+.-.+..++|+.+.++|+--|
T Consensus 481 fdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 481 FDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred hHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 4555555554443332 35789999999999999888999999987776544
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.11 Score=51.13 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=48.1
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~ 211 (709)
+..+|-+=|-..+...|..-+.. +++... . ......+.++.+....+. ++++.|||.||.+|..
T Consensus 37 ~~~~vaFRGTd~t~~~W~ed~~~-------------~~~~~~-~-~q~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~y 100 (224)
T PF11187_consen 37 GEYVVAFRGTDDTLVDWKEDFNM-------------SFQDET-P-QQKSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQY 100 (224)
T ss_pred CeEEEEEECCCCchhhHHHHHHh-------------hcCCCC-H-HHHHHHHHHHHHHHhCCC-CEEEEEechhhHHHHH
Confidence 34577777776655556543221 111111 1 112333444444444543 5999999999999999
Q ss_pred HHHhC----CCceeEEEEecC
Q 005190 212 VAARN----PDIDLVLILVNP 228 (709)
Q Consensus 212 ~A~~~----P~~v~~lVl~~p 228 (709)
+|+.. .++|..+...++
T Consensus 101 aa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 101 AAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHccHHHhhheeEEEEeeC
Confidence 98874 346777777766
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.12 Score=53.73 Aligned_cols=86 Identities=16% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACI 208 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~i 208 (709)
.-.-||.-|=||....=..+.+.| .+|+.|+.+|-.-|=.| +-++.++|+..+++....+.+..+++|+|+|+|+=+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADv 339 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADV 339 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchh
Confidence 446778888777666666778888 48999999996666555 889999999999999888888899999999999987
Q ss_pred HHHHHHhCC
Q 005190 209 ALAVAARNP 217 (709)
Q Consensus 209 Al~~A~~~P 217 (709)
--..-.+.|
T Consensus 340 lP~~~n~L~ 348 (456)
T COG3946 340 LPFAYNRLP 348 (456)
T ss_pred hHHHHHhCC
Confidence 655544444
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.094 Score=57.84 Aligned_cols=117 Identities=13% Similarity=-0.020 Sum_probs=73.9
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeC--CCCCCcc-c--HHHHHH---Hh-cCCceEEEEeCCCCCCC--CH----HHH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLP--GIDGVGL-G--LIRQHQ---RL-GKIFDIWCLHIPVKDRT--SF----TGL 177 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lH--G~~~s~~-~--~~~~~~---~L-~~~~~Vi~~Dl~G~G~S--s~----~~~ 177 (709)
||....--.|...+. ...|+++..+ -+.-... . -....+ .+ ++||.|+..|.||.|.| .+ .+-
T Consensus 28 DGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E 105 (563)
T COG2936 28 DGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSRE 105 (563)
T ss_pred CCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecccc
Confidence 555544444554432 2477788777 2222211 1 111222 34 58999999999999999 11 123
Q ss_pred HHHHHHHHHHhhc-cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 178 VKLVESTVRSESN-RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 178 ~~dl~~~l~~~~~-~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
++|-.++|+.+.. ..-+.+|..+|.|++|...+.+|+..|..++.++...+...
T Consensus 106 ~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 106 AEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 3444444444433 23367899999999999999999999988888777655443
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.11 Score=53.97 Aligned_cols=38 Identities=24% Similarity=0.159 Sum_probs=33.1
Q ss_pred CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcc
Q 005190 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN 233 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~ 233 (709)
...++||||||.=|+.+|+++|+++..+.-.++.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 68999999999999999999999999888777755543
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.39 Score=47.29 Aligned_cols=95 Identities=21% Similarity=0.215 Sum_probs=58.7
Q ss_pred EEEEeCCC--CCCc-ccHHHHHHHhc-CCceEEEEeCCC-CCCC-CHHHHHHHHHHHHHHhhccCC----CCCEEEEEec
Q 005190 134 LLLFLPGI--DGVG-LGLIRQHQRLG-KIFDIWCLHIPV-KDRT-SFTGLVKLVESTVRSESNRSP----KRPVYLVGES 203 (709)
Q Consensus 134 ~Vv~lHG~--~~s~-~~~~~~~~~L~-~~~~Vi~~Dl~G-~G~S-s~~~~~~dl~~~l~~~~~~~~----~~~v~LvGhS 203 (709)
+|-|+-|. +... ..|+.+.+.|+ +||.|++.-+.- +..- -..+..+.....++.+....+ .-|++-+|||
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHS 98 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHS 98 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecc
Confidence 56777775 3333 46888999994 899999987632 2111 112222223333333333221 2478899999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecC
Q 005190 204 LGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
|||.+-+.+...++..-++-|+++-
T Consensus 99 lGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 99 LGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cchHHHHHHhhhccCcccceEEEec
Confidence 9999999888877655567777644
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.087 Score=58.04 Aligned_cols=85 Identities=8% Similarity=-0.029 Sum_probs=56.4
Q ss_pred cHHHHHHHhc-CCce-----EEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC-
Q 005190 147 GLIRQHQRLG-KIFD-----IWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP- 217 (709)
Q Consensus 147 ~~~~~~~~L~-~~~~-----Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P- 217 (709)
.|..+++.|+ .||. ...+|+|=-..- .-+++...+...|+......++++++|+||||||.+++.+.....
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 4678888884 4554 333455522111 236666778888887766666789999999999999998776321
Q ss_pred --------------CceeEEEEecCCCC
Q 005190 218 --------------DIDLVLILVNPATS 231 (709)
Q Consensus 218 --------------~~v~~lVl~~p~~~ 231 (709)
..|++.|.++++..
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccC
Confidence 12677777766433
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.045 Score=47.26 Aligned_cols=92 Identities=17% Similarity=0.217 Sum_probs=35.9
Q ss_pred cccccccccchhhhhhHHHHHhhhhcccccc--ccccCCC----CcHhhHH-------HHHHHh-----hcccCCCCCCc
Q 005190 57 PTRIFVEKKSSELVEDEAETKQRVNVREYSE--EESEGNG----KSLKDYF-------DEAEDM-----IKSSSGGGPPR 118 (709)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~-------~~~~~~-----~~~~~~g~~~~ 118 (709)
|++..+++...+.++.+++......+..... .|+.|.. +.+.+|. .....+ .+...+|-.+.
T Consensus 2 pF~i~v~~~~l~~l~~rl~~~r~p~~~~~~~~~~w~~G~~~~~l~~L~~yW~~~fDWr~~E~~lN~~phf~t~I~g~~iH 81 (112)
T PF06441_consen 2 PFTIHVPDEELDDLRQRLRATRLPDEPPEPGQEDWDYGTPLDWLKELVDYWRNEFDWRKHEARLNSFPHFKTEIDGLDIH 81 (112)
T ss_dssp B------HHHHHHHHHHHHHS------TGGG-TT-TTSS-HHHHHHHHHHHHHT--HHHHHHHHTTS-EEEEEETTEEEE
T ss_pred CEEEECCHHHHHHHHHHHhccCCCCCCcCCCccccccCCCHHHHHHHHHHHhhcCChHHHHHHHHcCCCeeEEEeeEEEE
Confidence 3445555555666666666666554444431 1555544 2222222 111111 11122454455
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ 151 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~ 151 (709)
+++.... .+++.+|||+||++||-..|..+
T Consensus 82 Fih~rs~---~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 82 FIHVRSK---RPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEE--S----TT-EEEEEE--SS--GGGGHHH
T ss_pred EEEeeCC---CCCCeEEEEECCCCccHHhHHhh
Confidence 5554433 33677899999999999888765
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.45 Score=49.33 Aligned_cols=56 Identities=14% Similarity=-0.048 Sum_probs=34.8
Q ss_pred HHHHHHhcCCCeEEEecCchhhhhccCCccceecc---CCChhHHHHHHHcCCcEEEeeee
Q 005190 517 INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW---PESSEFVRMATTFGAKIVPFGAV 574 (709)
Q Consensus 517 ~~~~~~L~~g~~v~ifPeG~r~~~~~~~~~~~l~~---~~k~G~~~lA~~~~~pIvPv~~~ 574 (709)
..+.++|++|+.|+|-+.=.-. ...|...+.+. ..-+|.+.+|.++++||||+++.
T Consensus 173 r~l~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~ 231 (295)
T PRK05645 173 LSVIKEVRKGGQVGIPADPEPA--ESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHAL 231 (295)
T ss_pred HHHHHHHhcCCeEEEcCCCCCC--CCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEE
Confidence 3477889999999998432210 00111111111 11246778999999999999994
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.19 Score=53.45 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhccCCCCC--EEEEEechhHHHHHHHHHh
Q 005190 176 GLVKLVESTVRSESNRSPKRP--VYLVGESLGACIALAVAAR 215 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~~~~~--v~LvGhS~GG~iAl~~A~~ 215 (709)
.+.+++...++.+...++..+ |++.||||||++|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345556666666555566554 9999999999999998854
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.17 Score=54.62 Aligned_cols=111 Identities=18% Similarity=0.134 Sum_probs=74.6
Q ss_pred ccccccCC-CCCCCCCEEEEeCCCCCCcccHHHHHHH----hc---------------CCceEEEEe-CCCCCCC-----
Q 005190 119 WFSPLECG-SHTRDSPLLLFLPGIDGVGLGLIRQHQR----LG---------------KIFDIWCLH-IPVKDRT----- 172 (709)
Q Consensus 119 ~~~~~~~g-~p~~~~p~Vv~lHG~~~s~~~~~~~~~~----L~---------------~~~~Vi~~D-l~G~G~S----- 172 (709)
++.|.-.+ .+..+.|.++.+.|.+|++..+..+.+. +. ..-+++-+| .-|.|.|
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc
Confidence 44443333 2344688999999999999888776431 11 225789999 6788888
Q ss_pred ----CHHHHHHHHHHHHHHhhccCC-----CCCEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCC
Q 005190 173 ----SFTGLVKLVESTVRSESNRSP-----KRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPA 229 (709)
Q Consensus 173 ----s~~~~~~dl~~~l~~~~~~~~-----~~~v~LvGhS~GG~iAl~~A~~~P~---~v~~lVl~~p~ 229 (709)
++....+|+..+.+.+.+..+ ..+.+|+|.|+||.-+..+|..--+ ..++++++.+.
T Consensus 167 e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 167 EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 455666666666665544321 3589999999999999888876443 35556655543
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.38 Score=48.60 Aligned_cols=100 Identities=17% Similarity=0.089 Sum_probs=59.2
Q ss_pred CCCCCEEEEeCCCCC--CcccHHHHHHHhcC----CceEEEEeCCCC-------CCC--CHHHHHHHHHHHHHHhhccCC
Q 005190 129 TRDSPLLLFLPGIDG--VGLGLIRQHQRLGK----IFDIWCLHIPVK-------DRT--SFTGLVKLVESTVRSESNRSP 193 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~--s~~~~~~~~~~L~~----~~~Vi~~Dl~G~-------G~S--s~~~~~~dl~~~l~~~~~~~~ 193 (709)
....|++++.||-.- +...+..+-..+++ .--++.+|.--- +.. .+..+++++.=.++. .++
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~---~yp 171 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEE---RYP 171 (299)
T ss_pred cccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhc---cCc
Confidence 345789999998532 22233333333332 245555554320 100 223334444433333 332
Q ss_pred ----CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 194 ----KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 194 ----~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
...-+|+|.|+||.+++..+..+|+.+..++.-+|...
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 24578999999999999999999999987777766443
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.31 Score=52.37 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=24.9
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHH
Q 005190 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214 (709)
Q Consensus 181 l~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~ 214 (709)
+.+.++....+.+..++++.|||+||++|..+|+
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3333443334467778999999999999998765
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.33 Score=46.76 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=39.5
Q ss_pred HHhcCCceEEEEeCCCCCCC------------CHHHHHHHHHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHHhC
Q 005190 153 QRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVRSESNRS-PKRPVYLVGESLGACIALAVAARN 216 (709)
Q Consensus 153 ~~L~~~~~Vi~~Dl~G~G~S------------s~~~~~~dl~~~l~~~~~~~-~~~~v~LvGhS~GG~iAl~~A~~~ 216 (709)
..+....+|+++-+|=-... -.+--..|+.+..++..... .+++++|+|||.|+.+...+...+
T Consensus 40 s~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34445577888766543211 11222244444444433333 567999999999999999998875
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.23 Score=53.08 Aligned_cols=73 Identities=8% Similarity=0.009 Sum_probs=52.9
Q ss_pred cHHHHHHHhc-CCce----E--EEEeCCC-CCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC
Q 005190 147 GLIRQHQRLG-KIFD----I--WCLHIPV-KDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (709)
Q Consensus 147 ~~~~~~~~L~-~~~~----V--i~~Dl~G-~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P 217 (709)
.|..+++.|. =||. + ..+|+|= +-.+ ..+++...+...++......+.+|++|++|||||.+.+.+...++
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhccc
Confidence 6777777774 2332 3 3456663 1112 446777778888888777788899999999999999999998887
Q ss_pred Cc
Q 005190 218 DI 219 (709)
Q Consensus 218 ~~ 219 (709)
+.
T Consensus 205 ~~ 206 (473)
T KOG2369|consen 205 AE 206 (473)
T ss_pred cc
Confidence 63
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.23 Score=52.78 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 176 GLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
++.+.+..+++.........++++.|||+||++|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3444455555442222234579999999999999988853
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.24 Score=52.83 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHHh
Q 005190 175 TGLVKLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~~--~~v~LvGhS~GG~iAl~~A~~ 215 (709)
+++.+++..+++. ++. .++++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~----y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEK----YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHh----cCcccccEEEeccchHHHHHHHHHHH
Confidence 3444555555544 433 368999999999999998864
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.29 Score=52.75 Aligned_cols=29 Identities=28% Similarity=0.484 Sum_probs=23.1
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHH
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAA 214 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~ 214 (709)
+.+....+..++++.|||+||++|..+|.
T Consensus 275 k~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 275 KEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 33334477788999999999999998875
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.25 E-value=0.74 Score=46.52 Aligned_cols=112 Identities=20% Similarity=0.194 Sum_probs=75.0
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcc-cHHHHHHHhc--------------CCceEEEEeCC-CCCCC----------
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL-GLIRQHQRLG--------------KIFDIWCLHIP-VKDRT---------- 172 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~-~~~~~~~~L~--------------~~~~Vi~~Dl~-G~G~S---------- 172 (709)
|+.|..... ....|..+.+.|.++.+. .|..+ +++. +..+++.+|-| |.|.|
T Consensus 19 wly~~~~~~-ks~~pl~lwlqGgpGaSstG~GNF-eE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~ 96 (414)
T KOG1283|consen 19 WLYYATANV-KSERPLALWLQGGPGASSTGFGNF-EELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTT 96 (414)
T ss_pred EEeeecccc-ccCCCeeEEecCCCCCCCcCccch-hhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccc
Confidence 444443322 235778899998865443 33332 2221 34678888865 66777
Q ss_pred CHHHHHHHHHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHhCC---------CceeEEEEecCCCCc
Q 005190 173 SFTGLVKLVESTVRSESNRS---PKRPVYLVGESLGACIALAVAARNP---------DIDLVLILVNPATSF 232 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~~P---------~~v~~lVl~~p~~~~ 232 (709)
+..+.+.|+.++++.+...+ ...|++|+..|.||-+|..++...- ..+.+++|-+++.+.
T Consensus 97 ~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 97 NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 66888999999998876544 4579999999999999998886432 235678887776653
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.29 Score=53.24 Aligned_cols=40 Identities=25% Similarity=0.312 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 176 GLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
++.+++..+++.........++++.|||+||++|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3445555555543222223579999999999999988854
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.32 Score=52.81 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=25.7
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHH
Q 005190 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214 (709)
Q Consensus 181 l~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~ 214 (709)
+...++.+...++..++++.|||+||++|..+|.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3334444444577889999999999999998875
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.34 Score=50.88 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=24.6
Q ss_pred HHHHHHHHhhccCCCC--CEEEEEechhHHHHHHHHHh
Q 005190 180 LVESTVRSESNRSPKR--PVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 180 dl~~~l~~~~~~~~~~--~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+.+.+..+...++.. ++++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3333344433335443 59999999999999988865
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.88 Score=49.18 Aligned_cols=102 Identities=19% Similarity=0.159 Sum_probs=57.7
Q ss_pred CCCCCEEEEeCCC---CCCcccHHHHHHHhc-CC-ceEEEEeCCC----------CCCC-C--HHHHHHHHHHHHHHhhc
Q 005190 129 TRDSPLLLFLPGI---DGVGLGLIRQHQRLG-KI-FDIWCLHIPV----------KDRT-S--FTGLVKLVESTVRSESN 190 (709)
Q Consensus 129 ~~~~p~Vv~lHG~---~~s~~~~~~~~~~L~-~~-~~Vi~~Dl~G----------~G~S-s--~~~~~~dl~~~l~~~~~ 190 (709)
.++.|++|+|||. +|++......-..|+ ++ +-|+.+++|= .+.. . -.--..|....++.+++
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 4468999999996 344444334455664 44 6666666542 1211 0 01122344444444332
Q ss_pred ---cCC--CCCEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCCC
Q 005190 191 ---RSP--KRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPATS 231 (709)
Q Consensus 191 ---~~~--~~~v~LvGhS~GG~iAl~~A~~~P---~~v~~lVl~~p~~~ 231 (709)
..+ .++|.|+|+|.||+.++.+.+. | ..+.++|+.++...
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 122 4679999999999988776654 3 33555666655443
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=90.55 E-value=6.1 Score=42.78 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=68.6
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHH--HHHHhcCCce-EEEEeCCCCCCC---CHHHHHHHHHHHHHHhhcc
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIR--QHQRLGKIFD-IWCLHIPVKDRT---SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~--~~~~L~~~~~-Vi~~Dl~G~G~S---s~~~~~~dl~~~l~~~~~~ 191 (709)
-.+.|-..|+- ..|..|++-|+-. .+.|.. ....| +.. .+.-|.|=.|.+ .-+++.+-+.++|++....
T Consensus 277 Ei~yYFnPGD~--KPPL~VYFSGyR~-aEGFEgy~MMk~L--g~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~ 351 (511)
T TIGR03712 277 EFIYYFNPGDF--KPPLNVYFSGYRP-AEGFEGYFMMKRL--GAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDY 351 (511)
T ss_pred eeEEecCCcCC--CCCeEEeeccCcc-cCcchhHHHHHhc--CCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHH
Confidence 35556666763 4668999999855 555554 34444 333 344588888888 4455555555555554443
Q ss_pred CC--CCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCC
Q 005190 192 SP--KRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATS 231 (709)
Q Consensus 192 ~~--~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~ 231 (709)
++ ...++|-|-|||..-|+.+++.. |. ++|+.-|-..
T Consensus 352 LgF~~~qLILSGlSMGTfgAlYYga~l~P~---AIiVgKPL~N 391 (511)
T TIGR03712 352 LGFDHDQLILSGLSMGTFGALYYGAKLSPH---AIIVGKPLVN 391 (511)
T ss_pred hCCCHHHeeeccccccchhhhhhcccCCCc---eEEEcCcccc
Confidence 43 46799999999999999999886 43 4566555433
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=90.25 E-value=0.89 Score=47.59 Aligned_cols=47 Identities=23% Similarity=0.312 Sum_probs=35.4
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCCcchhhhh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSFNKSVLQ 238 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~-----~v~~lVl~~p~~~~~~~~~~ 238 (709)
.+.+|+.|+|||+|+.+...+.....+ .|..+++++.+.+.....|.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~ 268 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWR 268 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHH
Confidence 367799999999999999877765433 37889999876666555543
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.80 E-value=0.42 Score=52.75 Aligned_cols=42 Identities=21% Similarity=0.222 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
+..+.+.+...+......++.-+++++|||+||.+|..++..
T Consensus 230 ArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 230 ARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344445555555555556777789999999999999988765
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.72 E-value=0.49 Score=50.42 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=23.7
Q ss_pred HHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHHh
Q 005190 181 VESTVRSESNRSPK--RPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 181 l~~~l~~~~~~~~~--~~v~LvGhS~GG~iAl~~A~~ 215 (709)
+..-+..+...++. ..|++.|||+||++|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 33333333333543 369999999999999988864
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.43 E-value=0.4 Score=50.34 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCCCCEEEEeCCCCC-CcccHHHHHHHhcCCceEEEEeCCCCCCC---CH-------HHHHHHHHHHHHHhhccCCCCCE
Q 005190 129 TRDSPLLLFLPGIDG-VGLGLIRQHQRLGKIFDIWCLHIPVKDRT---SF-------TGLVKLVESTVRSESNRSPKRPV 197 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~-s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---s~-------~~~~~dl~~~l~~~~~~~~~~~v 197 (709)
+++...||+.||+-+ +...|...+......+.=..+..+|+=.. ++ ..+++++.+.+.. ....++
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~----~si~kI 152 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYD----YSIEKI 152 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhc----ccccee
Confidence 334568999999987 55667666666543322213333333211 11 3344444443332 225789
Q ss_pred EEEEechhHHHHHHHH
Q 005190 198 YLVGESLGACIALAVA 213 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A 213 (709)
..+|||+||.++..+.
T Consensus 153 SfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeeecCCeeeeEEE
Confidence 9999999998875443
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.31 E-value=1 Score=47.26 Aligned_cols=74 Identities=24% Similarity=0.217 Sum_probs=51.2
Q ss_pred ceEEEEeCC-CCCCC---------CHHHHHHHHHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHhC---------
Q 005190 159 FDIWCLHIP-VKDRT---------SFTGLVKLVESTVRSESNRS---PKRPVYLVGESLGACIALAVAARN--------- 216 (709)
Q Consensus 159 ~~Vi~~Dl~-G~G~S---------s~~~~~~dl~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~~--------- 216 (709)
.+++.+|.| |-|.| +-++.++|+..++..+..+. ...+++|.|.|+||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 468899988 88888 11233466666666655444 357899999999999877777632
Q ss_pred -CCceeEEEEecCCCCc
Q 005190 217 -PDIDLVLILVNPATSF 232 (709)
Q Consensus 217 -P~~v~~lVl~~p~~~~ 232 (709)
+=.++|+++-++....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1147899998886654
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=88.24 E-value=1.4 Score=49.74 Aligned_cols=100 Identities=12% Similarity=-0.006 Sum_probs=55.1
Q ss_pred CCCEEEEeCCCCC---Cc--ccHHHHHHHhcCCceEEEEeCCC----C---CCCC---HHHHHHHHHHHHHHhhcc---C
Q 005190 131 DSPLLLFLPGIDG---VG--LGLIRQHQRLGKIFDIWCLHIPV----K---DRTS---FTGLVKLVESTVRSESNR---S 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~--~~~~~~~~~L~~~~~Vi~~Dl~G----~---G~Ss---~~~~~~dl~~~l~~~~~~---~ 192 (709)
.-|++|++||.+- ++ ..+....-...++.=|+.+.+|= + +... -.-=..|....++.++.- .
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 4689999999642 22 22222221224677788877652 1 1111 233334555555555432 3
Q ss_pred C--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 005190 193 P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (709)
Q Consensus 193 ~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~ 230 (709)
+ .++|.|+|||.||..+......- ...+.++|+.++..
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 3 36799999999999887776652 35799999988743
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.12 E-value=0.69 Score=50.35 Aligned_cols=21 Identities=43% Similarity=0.600 Sum_probs=18.4
Q ss_pred CCEEEEEechhHHHHHHHHHh
Q 005190 195 RPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+|++.|||+||.+|..+|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 368999999999999988764
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.91 E-value=0.85 Score=49.87 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=19.2
Q ss_pred CCCEEEEEechhHHHHHHHHHh
Q 005190 194 KRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
..+|++.|||+||++|+..|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 3589999999999999998853
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=86.85 E-value=1.8 Score=39.77 Aligned_cols=37 Identities=22% Similarity=0.243 Sum_probs=32.3
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
...++-|.||||..|+.+.-++|+.+.++|.++....
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 4577889999999999999999999999999877443
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.47 E-value=0.91 Score=49.48 Aligned_cols=21 Identities=29% Similarity=0.425 Sum_probs=18.5
Q ss_pred CCEEEEEechhHHHHHHHHHh
Q 005190 195 RPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+|++.|||+||.+|..+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999998853
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=86.40 E-value=0.99 Score=49.32 Aligned_cols=20 Identities=40% Similarity=0.531 Sum_probs=18.0
Q ss_pred CCEEEEEechhHHHHHHHHH
Q 005190 195 RPVYLVGESLGACIALAVAA 214 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~ 214 (709)
.+|++.|||+||.+|...|.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 46999999999999998885
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=86.04 E-value=15 Score=33.53 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=49.4
Q ss_pred CEEEEeCCCCCCcccHHHHHHHhcCCce-EEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 133 PLLLFLPGIDGVGLGLIRQHQRLGKIFD-IWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~~~~~L~~~~~-Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
..||++-|++..+..+..+. +.+.++ ++++|+...... ++.. .+.+.||++|||-++|-
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ldfDfsA-----------------y~hirlvAwSMGVwvAe 72 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLDFDFSA-----------------YRHIRLVAWSMGVWVAE 72 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcccchhh-----------------hhhhhhhhhhHHHHHHH
Confidence 38999999998877665433 234444 667888654321 1111 23467999999999998
Q ss_pred HHHHhCCCceeEEEEecC
Q 005190 211 AVAARNPDIDLVLILVNP 228 (709)
Q Consensus 211 ~~A~~~P~~v~~lVl~~p 228 (709)
.+....+ +++.+.++.
T Consensus 73 R~lqg~~--lksatAiNG 88 (214)
T COG2830 73 RVLQGIR--LKSATAING 88 (214)
T ss_pred HHHhhcc--ccceeeecC
Confidence 8876654 555666665
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.95 E-value=0.81 Score=45.33 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC
Q 005190 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P 217 (709)
++.+..+..+++..++..++..++.|-|||+||.+|..+..++.
T Consensus 255 ~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 255 FDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34556667777777888899999999999999999998887763
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=85.95 E-value=0.81 Score=45.33 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC
Q 005190 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P 217 (709)
++.+..+..+++..++..++..++.|-|||+||.+|..+..++.
T Consensus 255 ~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 255 FDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34556667777777888899999999999999999998887763
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=85.23 E-value=42 Score=33.94 Aligned_cols=95 Identities=12% Similarity=0.119 Sum_probs=63.7
Q ss_pred CCEEEEeCCCCCCc-ccHHHHHHHhcCCceEEEEeCCCC-------CCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVG-LGLIRQHQRLGKIFDIWCLHIPVK-------DRTSFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~-~~~~~~~~~L~~~~~Vi~~Dl~G~-------G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
.|.||++-.+.|.. ...+.-.+.|-....|+..|+-.- |.=+++|+.+-+.+++..+ +..+++++-+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~-----Gp~~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL-----GPDAHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHh-----CCCCcEEEEe
Confidence 45566666665543 344556677767788888887543 3338899999999999873 2346777777
Q ss_pred hhH-----HHHHHHHHhCCCceeEEEEecCCCC
Q 005190 204 LGA-----CIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 204 ~GG-----~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.-+ .++++.+...|..-+.+++++.+..
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 654 4455555566878888999877554
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.81 E-value=1.4 Score=46.37 Aligned_cols=37 Identities=24% Similarity=0.415 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
..+.+++..+++. ++.-.+.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~----~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIEL----YPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHh----cCCcEEEEecCChHHHHHHHHHHH
Confidence 4566666666655 777889999999999999988864
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=81.89 E-value=4.2 Score=45.12 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=56.0
Q ss_pred HHHHhcCCceEEEEeCCCCCCC---------------------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 151 QHQRLGKIFDIWCLHIPVKDRT---------------------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 151 ~~~~L~~~~~Vi~~Dl~G~G~S---------------------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
....+++||.+..-|- ||..+ +..+.+.--.++++..-.+ +.+.-+..|.|-||.-+
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~-~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGK-APKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCC-CCCceEEEEeCCCcchH
Confidence 4567789999999885 44322 1122222233344333232 34678999999999999
Q ss_pred HHHHHhCCCceeEEEEecCCCCc
Q 005190 210 LAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 210 l~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+..|.++|+.+.|+|..+|+..+
T Consensus 130 l~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHhChhhcCeEEeCCchHHH
Confidence 99999999999999999996554
|
It also includes several bacterial homologues of unknown function. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 1e-12
Identities = 91/592 (15%), Positives = 185/592 (31%), Gaps = 211/592 (35%)
Query: 59 RIF--VEKKSSELVEDEAETKQRVNVREY----SEEESEGNGKSL--KDYFDEAEDMIKS 110
R+F + K E+V+ E R+N Y S ++E S+ + Y ++ + +
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQPSMMTRMYIEQRDRL--- 119
Query: 111 SSGGGPPRWFSPLECGSHTRDSPLL--------------LFLPGIDGVG-----LGLIRQ 151
F+ +R P L + + G+ G G L +
Sbjct: 120 -YNDNQV--FAKYNV---SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 152 HQRL----GKIFDIWCLHIPVKDRTSFTGLVKLVES---------TVRSESNRSPKRPVY 198
++ KIF W + +K+ S ++++++ T RS+ + + K ++
Sbjct: 174 YKVQCKMDFKIF--W---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 199 LVGESLGACIALAVAARNPDIDLVL-----------------ILVNPATSFNKSV----- 236
+ L L + + LVL IL+ T+ K V
Sbjct: 229 SIQAELRR---LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL---TTRFKQVTDFLS 282
Query: 237 -LQSTIPLLE-----LIPGQITTMLSSTLSL---------MTGDPLKMAM------DNVA 275
+T L+ L P ++ ++L L +T +P ++++ D +A
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 276 ----------KRLS---------LQPT-IQDLSQDLVALSSYLPVLADILPKETL--LW- 312
+L+ L+P + + L S P A I P L +W
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL----SVFPPSAHI-PTILLSLIWF 397
Query: 313 ---------------KIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357
K L++ + + ++ + + +++
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--YLELKVKLENEY------------ 443
Query: 358 ALHK------CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTS-- 409
ALH+ P+ F D Y+ + ++ +
Sbjct: 444 ALHRSIVDHYNIPKTFDSDDLIPPYLDQ-----------YF-----YSHIGHHLKNIEHP 487
Query: 410 ---SEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVL 466
+ F + DFR++ KI + + G +L N L L
Sbjct: 488 ERMTLFRMVFLDFRFLE-------------QKIRHDSTAWNASGSIL-----NTLQ--QL 527
Query: 467 TLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPY-DVMRIMGAVPVSGI 517
++ +++ L + ++ F K S Y D++RI I
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 4e-10
Identities = 87/604 (14%), Positives = 179/604 (29%), Gaps = 144/604 (23%)
Query: 158 IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217
+ + C + ++ + + ++ + S + + +L +
Sbjct: 30 VDNFDCKDVQDMPKSILSK--EEIDHIIMS---KDAVSGTLRLFWTL----------LSK 74
Query: 218 DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVA-- 275
++V V N L S I + P +T M + D A NV+
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 276 -KRLSLQPTIQDL-SQDLVALS-------SYL--PVLADILPKETLLWKIELLKAASAYA 324
L L+ + +L V + +++ V + + +KI L +
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC-- 192
Query: 325 NSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFY---GHGHFLL 375
+ V + L Q+ P+ SS + + E R + + LL
Sbjct: 193 -NSPETVLEMLQKLLY---QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 376 LEDGV---------D-----LVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFRW 421
+ V + L+T R V+DF+ + + +
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTT----------RFKQ-VTDFLSAA-TTTHISLDHHSM 296
Query: 422 MRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLR 481
L+ + S L K L P + P + + L++I E + +
Sbjct: 297 --TLTPDEVKSLLL--KY---LDCRPQDLPREVLTTNPR----RLSIIAESIRDGLATWD 345
Query: 482 GLAHPMMYFKSK--EGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVR-- 537
H + E L+ L P + R ++ +S ++P
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAE-YR----------KMFDRLS------VFPPSAHIP 388
Query: 538 EALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKS 597
L L W + + M K+ + V + + + ++ K
Sbjct: 389 TIL------LSLIWFDVIKSDVM--VVVNKLHKYSLVEKQPKESTISIPSIYLE---LKV 437
Query: 598 QIEELTVTAARLRT--DTKGEVANQDMHMPYPVPKVPGRFYFYFG---KPIETKGRKREL 652
++E + + + D+ PY + FY + G K IE R
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPY----LDQYFYSHIGHHLKNIEHPERMTLF 493
Query: 653 RDREKAHELYLEIKSEVEKCLAYLKEKREND--------PYRNILPRLIYQATHGFTSQV 704
R ++L+ +L++K +D N L +L + +
Sbjct: 494 R------MVFLD--------FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY-ICDND 538
Query: 705 PTFE 708
P +E
Sbjct: 539 PKYE 542
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 4e-07
Identities = 36/213 (16%), Positives = 67/213 (31%), Gaps = 15/213 (7%)
Query: 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV 236
++K+ + S S ++G S+G ALA P++ +LIL+ P +
Sbjct: 121 VLKIATCELGSI--DSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV-ITRKA 177
Query: 237 LQSTIPLLELIPGQITTMLSSTLSLMTGD--PLKMAMDNVAKRLSLQPTIQDLSQDLVAL 294
+ + P L QI L ++L L T D + + S +
Sbjct: 178 IGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIID 237
Query: 295 SSYLPVLADILPKETLLWKIELLKAASAYANS---------RLHAVKAQMLVLCSGKDQL 345
D + K+E + Y N + V+ + + + +
Sbjct: 238 FERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNW 297
Query: 346 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 378
P + L L G H + +E
Sbjct: 298 CP-PQNQLFLQKTLQNYHLDVIPGGSHLVNVEA 329
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 28/189 (14%), Positives = 57/189 (30%), Gaps = 26/189 (13%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
++VG S+G + L + P + + L+ P
Sbjct: 103 EKSHIVGNSMGGAVTLQLVVEAP--ERFDKVALMGSVG----------------APMNAR 144
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVAL---SSYLPVLADILPKET 309
+ L DP + P +++V + P + I E
Sbjct: 145 PPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQ--EV 202
Query: 310 LLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG 369
+ ++ + + L + +LV +D+++P + L+ L E
Sbjct: 203 MFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL-DTSLYLTKHLKHAELVVLDR 261
Query: 370 HGHFLLLED 378
GH+ LE
Sbjct: 262 CGHWAQLER 270
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 26/187 (13%)
Query: 194 KRPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQI 251
V +VG S+G L V+ + +LV L+L+ A + + P++
Sbjct: 105 DGKVSIVGNSMGGATGLGVSVLHS--ELVNALVLMGSA-GLVVEIHEDLRPIINYDF--T 159
Query: 252 TTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLL 311
+ + +T D K+ + R + D +Y+ + I
Sbjct: 160 REGMVHLVKALTNDGFKIDDAMINSRY-------TYATDEATRKAYVATMQWIRE----- 207
Query: 312 WKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHG 371
+ Y + V+ LV+ D+++P E + + G
Sbjct: 208 ------QGGLFYDPEFIRKVQVPTLVVQGKDDKVVPV-ETAYKFLDLIDDSWGYIIPHCG 260
Query: 372 HFLLLED 378
H+ ++E
Sbjct: 261 HWAMIEH 267
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPA----TSFNKSVLQSTIPLLELIPG 249
V LVG +LG A+ A P L+L+ P F + L +
Sbjct: 107 RVPLVGNALGGGTAVRFALDYP--ARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164
Query: 250 QITTMLSSTLSLMTGDPLKMAMDNVAKR--LSLQPTIQDLSQDLVALSSYLPVLADILPK 307
L + L +M D + + V +R L+ P A + A +
Sbjct: 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLT------ATRAMGKSFAGADFE 218
Query: 308 ETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 367
++W+ ++ ++ +L++ +D++ P + + + + F
Sbjct: 219 AGMMWR-------------EVYRLRQPVLLIWGREDRVNPL-DGALVALKTIPRAQLHVF 264
Query: 368 YGHGHFLLLED 378
GH++ +E
Sbjct: 265 GQCGHWVQVEK 275
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 32/189 (16%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
++VG + G +A+A A R + V ++L+ A + L + G +
Sbjct: 96 KAHIVGNAFGGGLAIATALRYS--ERVDRMVLMGAAGTRFDV-----TEGLNAVWGYTPS 148
Query: 254 --MLSSTLSLMTGDPLKMAMDNVAKR--LSLQPTIQDLSQDLVALSSYLPVLADILPKET 309
+ + L + D + + R S+QP Q+ + SS P
Sbjct: 149 IENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQE------SFSSMFPEPRQ------ 196
Query: 310 LLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG 369
A A ++ + + + L++ +DQ++P RL + + + F
Sbjct: 197 ------RWIDALASSDEDIKTLPNETLIIHGREDQVVPL-SSSLRLGELIDRAQLHVFGR 249
Query: 370 HGHFLLLED 378
GH+ +E
Sbjct: 250 CGHWTQIEQ 258
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 40/177 (22%), Positives = 63/177 (35%), Gaps = 31/177 (17%)
Query: 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232
F V+ V V S P PV+L+G S+G IA+ AA P ++L++P
Sbjct: 110 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 169
Query: 233 NKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQD-LSQDL 291
N + + L+ V LSL P LS++
Sbjct: 170 NPES-----------ATTFKVLAAKVLN------------LVLPNLSLGPIDSSVLSRNK 206
Query: 292 VALSSYLPVLADIL---PKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345
+ Y +D L + + I+LL A + L + L+L D+L
Sbjct: 207 TEVDIY---NSDPLICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRL 259
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 4e-06
Identities = 17/84 (20%), Positives = 33/84 (39%)
Query: 172 TSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231
+ ++ + + R +YLVG + G +A +A PD+ ++L+ PA +
Sbjct: 96 MTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155
Query: 232 FNKSVLQSTIPLLELIPGQITTML 255
L+ + P I L
Sbjct: 156 LKGDALEGNTQGVTYNPDHIPDRL 179
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 31/177 (17%)
Query: 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232
F V+ V V S P PV+L+G S+G IA+ AA P ++L++P
Sbjct: 92 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPL--- 148
Query: 233 NKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQD-LSQDL 291
+ + + L+ +V LS P LS++
Sbjct: 149 --------VLANPESATTFKVLAAKVLN------------SVLPNLSSGPIDSSVLSRNK 188
Query: 292 VALSSYLPVLADIL---PKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345
+ Y +D L + + I+LL A + L + L+L D+L
Sbjct: 189 TEVDIY---NSDPLICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRL 241
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 23/184 (12%), Positives = 54/184 (29%), Gaps = 23/184 (12%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
L G S G +A A+A D + L P
Sbjct: 90 RFILYGHSYGGYLAQAIAFHLK--DQTLGVFLTCPVI----------------TADHSKR 131
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWK 313
+ ++++ D + I + + +P L +T + +
Sbjct: 132 LTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQ--KEDKTFIDQ 189
Query: 314 IELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHF 373
++ + + + + ++ DQ++ +E +L + E GH
Sbjct: 190 LQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGY-QEQLKLINHNENGEIVLLNRTGHN 248
Query: 374 LLLE 377
L+++
Sbjct: 249 LMID 252
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 37/186 (19%), Positives = 60/186 (32%), Gaps = 24/186 (12%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
+VG +LGA + + +A P V LI VN N + L
Sbjct: 82 EHYAVVGHALGALVGMQLALDYP--ASVTVLISVNGWLRINAHTRRCFQVRERL------ 133
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLW 312
L +G + L + + L A LA K LL
Sbjct: 134 --------LYSGGAQAWV-EAQPLFLYPADWMAARAPRLEAED--ALALAHFQGKNNLLR 182
Query: 313 KIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGH 372
++ LK A ++ + ++C+ D L+P+ L +AL + GH
Sbjct: 183 RLNALKRADFSH--HADRIRCPVQIICASDDLLVPT-ACSSELHAALPDSQKMVMPYGGH 239
Query: 373 FLLLED 378
+ D
Sbjct: 240 ACNVTD 245
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 36/194 (18%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
++L+G S+G ++A + P + V L+L+ T ++ +
Sbjct: 107 AKIHLLGNSMGGHSSVAFTLKWP--ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYR 164
Query: 253 TM----LSSTLSLMTGDPLKMAMDNVAKRLSL----QPTIQDLSQDLVALSSYLPVLADI 304
L + + D + RL+ + +++ + L A P
Sbjct: 165 QPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGP- 223
Query: 305 LPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEP 364
RL +KAQ L++ D+ +P + G RL S + E
Sbjct: 224 ----------------------RLAEIKAQTLIVWGRNDRFVPM-DAGLRLLSGIAGSEL 260
Query: 365 RNFYGHGHFLLLED 378
F GH+ E
Sbjct: 261 HIFRDCGHWAQWEH 274
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Query: 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG 249
+Y+ G S G + AA DI LI ++PA + + L+ P
Sbjct: 95 KLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPE 154
Query: 250 QITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288
I L + G LK VA+ + ++ + +
Sbjct: 155 NIPDELDA----WDGRKLKGNYVRVAQTIRVEDFVDKYT 189
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 28/190 (14%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPA----TSFNKSVLQSTIPLLELIP 248
+LVG ++G AL A P D + LIL+ P + F ++ L +L
Sbjct: 104 DRAHLVGNAMGGATALNFALEYP--DRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYA 161
Query: 249 GQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKE 308
L L + D + + + R + + + L ++L
Sbjct: 162 EPSYETLKQMLQVFLYDQSLITEELLQGRW------EAIQRQPEHLKNFLISAQKAPLST 215
Query: 309 TLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 368
+ +RL +KA+ + D+ +P + G +L + F
Sbjct: 216 WDVT-------------ARLGEIKAKTFITWGRDDRFVPL-DHGLKLLWNIDDARLHVFS 261
Query: 369 GHGHFLLLED 378
G + E
Sbjct: 262 KCGAWAQWEH 271
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 29/185 (15%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
+++G SLG + R P + V +++PA +F + +
Sbjct: 135 KSHMIGLSLGGLHTMNFLLRMP--ERVKSAAILSPAETFLP---FHHDFYKYALGLTASN 189
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWK 313
+ + L+ M D + V + + + P
Sbjct: 190 GVETFLNWMMNDQNVLHPIFVKQ-------FKAGVMWQDGSRNPNPNADGF--------- 233
Query: 314 IELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHF 373
+ + L + + +L+L + + R SS + E GH
Sbjct: 234 ------PYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHV 287
Query: 374 LLLED 378
L +E
Sbjct: 288 LSMEQ 292
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-05
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 171 RTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230
+ + + V + + K V++ G SLG A+ P I + +P
Sbjct: 71 KGNPDIWWAESSAAVAHMTAKYAK--VFVFGLSLGGIFAMKALETLPGITAGGVFSSPIL 128
Query: 231 SFNKSVLQSTIPLLELIP 248
++ + E +
Sbjct: 129 PGKHHLVPGFLKYAEYMN 146
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 42/187 (22%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
+ + L+G S+G I L VA + V ++ ++ F+ L + +I
Sbjct: 84 KNITLIGYSMGGAIVLGVALKKL--PNVRKVVSLSGGARFD--------KLDKDFMEKIY 133
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRL--SLQPTIQDLSQDLVALSSYLPVLADILPKETL 310
L+ + + + ++++ +L+ + DL+A D++
Sbjct: 134 HNQLDNNYLL--ECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLI-----DLVD---- 182
Query: 311 LWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGH 370
L + + + + + L E E + + E + F
Sbjct: 183 ----------------NLKNIDIPVKAIVAKDELLTL-VEYSEIIKKEVENSELKIFETG 225
Query: 371 GHFLLLE 377
HFLL+
Sbjct: 226 KHFLLVV 232
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 20/185 (10%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
+G SLG +A +A +P + V L+ V + F+ + PG
Sbjct: 75 KAIWLGWSLGGLVASQIALTHP--ERVRALVTVASSPCFSAR---------DEWPGIKPD 123
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWK 313
+L+ ++ D + +A + T + ++ L LP+ + L
Sbjct: 124 VLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPM----PEVDVLNGG 179
Query: 314 IELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHF 373
+E+LK L V L L D L+P ++ L E F H
Sbjct: 180 LEILKTVDLRQ--PLQNVSMPFLRLYGYLDGLVP-RKVVPMLDKLWPHSESYIFAKAAHA 236
Query: 374 LLLED 378
+
Sbjct: 237 PFISH 241
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 19/165 (11%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM 254
++ G S GA ++L AA I + + P V S P+ ++ +
Sbjct: 87 GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYA-----VDDSRPPVPPDYQTRLDAL 141
Query: 255 LSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKI 314
L+ GD + M + DLVA P+ + L
Sbjct: 142 LAE---GRRGDAVTYFMTEGV----------GVPPDLVAQMQQAPMWPGMEAVAHTLPYD 188
Query: 315 ELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359
+ + +R ++ LV+ G + + L+ +
Sbjct: 189 HAVMGDNTIPTARFASISIPTLVMDGGASPAWI-RHTAQELADTI 232
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 55/302 (18%), Positives = 103/302 (34%), Gaps = 54/302 (17%)
Query: 98 KDYFDEAEDM-IKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG 156
YF+ ED+ +++ +G F + GS + P+LL L G L +
Sbjct: 9 SQYFESMEDVEVENETGKDT---FRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAII 62
Query: 157 KIFDIWCLHI--------PVKDRTSFT--GLVKLVESTVRSESNRSPKRPVYLVGESLGA 206
+ + VK+ + + K V + V + P P+ L+G S+G
Sbjct: 63 SRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLP-PPIMLIGHSMGG 121
Query: 207 CIALAVAARNPDIDLV-LILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD 265
IA+ A+ N L+ L +++ G L+S + + G
Sbjct: 122 AIAVHTASSNLVPSLLGLCMIDVV------------------EGTAMDALNSMQNFLRGR 163
Query: 266 PLKMA-MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLL------WKIELLK 318
P ++N + I++L V++ + I E W+IEL K
Sbjct: 164 PKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAK 223
Query: 319 AASAYAN------SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGH 372
+ + + L+L +G D+L G+ + + GH
Sbjct: 224 TEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKF----QMQVLPQCGH 279
Query: 373 FL 374
+
Sbjct: 280 AV 281
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 22/192 (11%), Positives = 49/192 (25%), Gaps = 19/192 (9%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTML 255
L S+G AL + ++ L I + P T I +
Sbjct: 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTT--------VMIYRAGFSSDLYPQLA 162
Query: 256 SSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIE 315
L T + ++++ + L + L + L +
Sbjct: 163 LRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQ-------SLPDFK 215
Query: 316 LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 375
+ A + K +V + + E + G H+L
Sbjct: 216 IRLALGEEDFKTGISEKIPSIVFSESFREKEYLESEYLNKHTQTKLILC----GQHHYLH 271
Query: 376 LEDGVDLVTIIK 387
+ ++ ++
Sbjct: 272 WSETNSILEKVE 283
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 709 | |||
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.96 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.96 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.96 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.95 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.95 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.95 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.95 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.95 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.94 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.94 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.94 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.94 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.94 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.94 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.94 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.94 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.94 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.94 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.94 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.94 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.94 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.94 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.94 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.94 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.94 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.94 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.93 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.93 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.93 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.93 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.93 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.93 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.93 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.93 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.93 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.93 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.93 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.93 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.93 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.93 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.92 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.92 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.92 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.92 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.92 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.92 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.92 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.92 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.92 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.92 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.92 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.92 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.92 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.92 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.92 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.92 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.92 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.91 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.91 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.91 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.91 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.91 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.91 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.91 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.91 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.91 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.91 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.9 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.9 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.9 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.9 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.9 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.9 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.89 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.89 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.89 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.89 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.89 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.89 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.89 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.89 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.88 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.88 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.88 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.88 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.88 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.87 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.79 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.87 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.87 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.87 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.86 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.85 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.85 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.84 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.83 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.83 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.83 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.83 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.83 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.83 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.83 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.82 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.82 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.81 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.81 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.81 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.81 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.8 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.8 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.8 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.79 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.79 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.79 | |
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.79 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.79 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.79 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.79 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.78 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.78 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.78 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.78 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.78 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.78 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.76 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.75 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.75 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.74 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.74 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.73 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.73 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.72 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.72 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.72 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.71 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.71 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.71 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.71 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.71 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.7 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.7 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.7 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.7 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.69 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.69 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.69 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.69 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.68 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.68 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.67 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.66 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.66 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.66 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.65 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.65 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.65 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.65 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.65 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.64 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.63 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.63 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.62 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.62 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.62 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.62 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.62 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.62 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.61 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.61 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.6 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.6 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.57 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.57 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.56 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.56 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.55 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.55 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.54 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.54 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.53 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.52 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.51 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.51 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.51 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.49 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.49 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.47 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.47 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.46 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.46 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.46 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.46 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.45 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.44 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.44 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.43 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.42 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.41 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.4 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.37 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.37 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.36 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.35 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.35 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.35 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.32 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.28 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.27 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.26 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.25 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.17 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.06 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.05 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.05 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.03 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.02 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.02 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.02 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.01 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.99 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.96 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 98.86 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 98.83 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.77 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.73 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.56 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.21 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.1 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.09 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.06 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 97.93 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 97.89 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.89 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.83 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 97.71 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 97.7 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 97.63 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.51 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.3 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.24 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.23 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.21 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.14 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.13 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.1 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.06 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.01 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.98 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.97 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.91 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 96.86 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.84 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 96.8 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 96.55 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 96.53 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.45 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 96.38 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 95.84 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 95.83 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.67 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 95.67 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.59 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.49 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.09 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.02 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 94.92 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.74 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.4 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 94.39 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 94.11 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 93.89 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 92.09 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 89.57 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 88.91 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 87.63 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 82.51 |
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=249.75 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=163.0
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~ 191 (709)
+.|...|.+.+++|+|||+||++++...|..+.+.|+++|+|+++|+||||.| +++++++|+.++++.
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~---- 78 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVA---- 78 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHH----
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHH----
Confidence 34555565445688999999999999999999999998999999999999998 678999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHh-HHHhhhhhcCchhhhH
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM-LSSTLSLMTGDPLKMA 270 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 270 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++.......... .+.......... ...+... ....
T Consensus 79 l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~-- 149 (268)
T 3v48_A 79 AGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRR----CFQVRERLLYSGGAQAWVEA---QPLF-- 149 (268)
T ss_dssp TTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHH----HHHHHHHHHHHHHHHHHHHH---HHHH--
T ss_pred cCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhH----HHHHHHHHHhccchhhhhhh---hhhh--
Confidence 55678999999999999999999999999999999986543221110 000000000000 0000000 0000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
................. .............+......+. ..+....+.+++||+|+|+|++|.+++.+.
T Consensus 150 -------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~ 218 (268)
T 3v48_A 150 -------LYPADWMAARAPRLEAE--DALALAHFQGKNNLLRRLNALK--RADFSHHADRIRCPVQIICASDDLLVPTAC 218 (268)
T ss_dssp -------HSCHHHHHTTHHHHHHH--HHHHHHTCCCHHHHHHHHHHHH--HCBCTTTGGGCCSCEEEEEETTCSSSCTHH
T ss_pred -------cCchhhhhcccccchhh--HHHHHhhcCchhHHHHHHHHHh--ccchhhhhhcCCCCeEEEEeCCCcccCHHH
Confidence 00000000000000000 0000000011111111111111 122345678999999999999999999997
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 219 -~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~f 256 (268)
T 3v48_A 219 -SSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNG 256 (268)
T ss_dssp -HHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHHHHH
T ss_pred -HHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999943
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=249.38 Aligned_cols=240 Identities=14% Similarity=0.123 Sum_probs=163.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
.++|...|.+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 16 ~l~y~~~G~~--~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~dl~~~l~~---- 89 (266)
T 3om8_A 16 SLAYRLDGAA--EKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDA---- 89 (266)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHHHHHHHHH----
T ss_pred EEEEEecCCC--CCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Confidence 4567776652 478899999999999999999999999999999999999999 679999999999998
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhH
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (709)
++.++++|+||||||.+|+.+|.++|++|+++|++++........ +.......... ..........+..+.....
T Consensus 90 l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--- 165 (266)
T 3om8_A 90 LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQA-EDMSETAAGFLGNWFPPAL--- 165 (266)
T ss_dssp TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHC-SSSHHHHHHHHHHHSCHHH---
T ss_pred hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHcc-ccHHHHHHHHHHHhcChhh---
Confidence 556789999999999999999999999999999999865432211 11000000000 0000000001100000000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
.. ......+.+.... .......+......+. ..+..+.+.++++|+|+|+|++|.+++++.
T Consensus 166 ----~~--~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~ 226 (266)
T 3om8_A 166 ----LE--RAEPVVERFRAML-----------MATNRHGLAGSFAAVR--DTDLRAQLARIERPTLVIAGAYDTVTAASH 226 (266)
T ss_dssp ----HH--SCCHHHHHHHHHH-----------HTSCHHHHHHHHHHHH--TCBCTTTGGGCCSCEEEEEETTCSSSCHHH
T ss_pred ----hh--cChHHHHHHHHHH-----------HhCCHHHHHHHHHHhh--ccchhhHhcCCCCCEEEEEeCCCCCCCHHH
Confidence 00 0001111111100 0111222221111111 122346688999999999999999999997
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+++.+|++++++++ +||++++|+|++|++.|.+|
T Consensus 227 -~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i~~F 263 (266)
T 3om8_A 227 -GELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLSF 263 (266)
T ss_dssp -HHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHHHHH
T ss_pred -HHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHHHHH
Confidence 99999999999999997 89999999999999999943
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=242.15 Aligned_cols=241 Identities=14% Similarity=0.083 Sum_probs=161.9
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
.++|...|.+.+++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 13 ~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~---- 88 (266)
T 2xua_A 13 ELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLGLMDT---- 88 (266)
T ss_dssp EEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH----
T ss_pred EEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----
Confidence 355666665311278999999999999999999999988899999999999998 679999999999998
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhH
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++........ +......... ..........+..+......
T Consensus 89 l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 164 (266)
T 2xua_A 89 LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKART--EGMHALADAVLPRWFTADYM-- 164 (266)
T ss_dssp TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHH--HCHHHHHHHHHHHHSCHHHH--
T ss_pred cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHh--cChHHHHHHHHHHHcCcccc--
Confidence 445789999999999999999999999999999999865432211 1000000000 00000000000000000000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
. ......+.+... ........+......+.. ....+.+.++++|+|+|+|++|.+++++.
T Consensus 165 -----~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 224 (266)
T 2xua_A 165 -----E--REPVVLAMIRDV-----------FVHTDKEGYASNCEAIDA--ADLRPEAPGIKVPALVISGTHDLAATPAQ 224 (266)
T ss_dssp -----H--HCHHHHHHHHHH-----------HHTSCHHHHHHHHHHHHH--CCCGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred -----c--CCHHHHHHHHHH-----------HhhCCHHHHHHHHHHHhc--cCchhhhccCCCCEEEEEcCCCCcCCHHH
Confidence 0 000000000000 000111222211122211 12345678899999999999999999996
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+.+++.++++++++++ +||++++|+|+++++.|.+|
T Consensus 225 -~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 261 (266)
T 2xua_A 225 -GRELAQAIAGARYVELD-ASHISNIERADAFTKTVVDF 261 (266)
T ss_dssp -HHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHHHH
T ss_pred -HHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHHHH
Confidence 89999999999999999 99999999999999999943
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=239.45 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=158.8
Q ss_pred cccccccCCCCCCCCCEEEEeCCCC---CCcccHHHHH-HHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHH
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQH-QRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTV 185 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~---~s~~~~~~~~-~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l 185 (709)
..++|.+.|+ +|+|||+||++ ++...|..++ +.|++.|+|+++|+||||.| +++++++|+.+++
T Consensus 23 ~~l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l 98 (286)
T 2puj_A 23 FNIHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM 98 (286)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEecCC----CCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 3456777775 57899999997 7777899899 99987899999999999998 3588899999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh----hhhhhhHHHhhchhhhHHhHHHhhhh
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS----VLQSTIPLLELIPGQITTMLSSTLSL 261 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (709)
++ ++.++++|+||||||.+|+.+|.++|++|+++|++++....... .......................+..
T Consensus 99 ~~----l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (286)
T 2puj_A 99 DA----LDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQV 174 (286)
T ss_dssp HH----TTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HH----hCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHH
Confidence 88 55678999999999999999999999999999999986532110 00000000000000000000011110
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh---hhHhhhhcccCCccEEEE
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA---SAYANSRLHAVKAQMLVL 338 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLvi 338 (709)
...+. .....+.....+.... ............+... .......+.++++|+|+|
T Consensus 175 ~~~~~----------~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii 232 (286)
T 2puj_A 175 FLYDQ----------SLITEELLQGRWEAIQ------------RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFIT 232 (286)
T ss_dssp HCSCG----------GGCCHHHHHHHHHHHH------------HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEE
T ss_pred HhcCC----------ccCCHHHHHHHHHHhh------------cCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEE
Confidence 10000 0000011111110000 0011111111111100 111335678899999999
Q ss_pred eeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 339 CSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 339 ~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|++|.+++.+. ++.+++.+|++++++++++||++++|+|+++++.|.+|
T Consensus 233 ~G~~D~~~p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 282 (286)
T 2puj_A 233 WGRDDRFVPLDH-GLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVIDF 282 (286)
T ss_dssp EETTCSSSCTHH-HHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHH
T ss_pred EECCCCccCHHH-HHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 999999999997 88999999999999999999999999999999999943
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=237.36 Aligned_cols=243 Identities=11% Similarity=0.049 Sum_probs=156.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|.+.|+ +++|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.+++++
T Consensus 18 ~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~--- 90 (281)
T 3fob_A 18 EIYYEDHGT----GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQ--- 90 (281)
T ss_dssp EEEEEEESS----SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH---
T ss_pred EEEEEECCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHH---
Confidence 466777775 6789999999999999999999994 6899999999999999 679999999999998
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhh--h-hh-hh-HHHhhchhhhH----HhHHHhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSV--L-QS-TI-PLLELIPGQIT----TMLSSTLS 260 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~--~-~~-~~-~~~~~~~~~~~----~~~~~~~~ 260 (709)
++.++++|+||||||.+++.+++.+ |++++++|++++..+..... . .. .. .....+..... .....+..
T Consensus 91 -l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (281)
T 3fob_A 91 -LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTK 169 (281)
T ss_dssp -TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHH
Confidence 5567899999999999888777664 89999999998754321100 0 00 00 00000000000 00000000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
.+.... .......+........... .............+. ..+....+.++++|+|+|+|
T Consensus 170 ~~~~~~--------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lii~G 229 (281)
T 3fob_A 170 GFFAAG--------DRTDLVSESFRLYNWDIAA----------GASPKGTLDCITAFS--KTDFRKDLEKFNIPTLIIHG 229 (281)
T ss_dssp HHTCBT--------TBCCSSCHHHHHHHHHHHH----------TSCHHHHHHHHHHHH--HCCCHHHHTTCCSCEEEEEE
T ss_pred Hhcccc--------cccccchHHHHHHhhhhhc----------ccChHHHHHHHHHcc--ccchhhhhhhcCCCEEEEec
Confidence 000000 0000000001000000000 001111111111111 12234567899999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|.++|.+...+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 230 ~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~F 278 (281)
T 3fob_A 230 DSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLF 278 (281)
T ss_dssp TTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHHH
Confidence 9999999986247778899999999999999999999999999999943
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=234.99 Aligned_cols=243 Identities=14% Similarity=0.112 Sum_probs=153.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|.+.|+ +++|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.++++++
T Consensus 10 ~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d~~~~l~~l-- 83 (271)
T 3ia2_A 10 QIYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL-- 83 (271)
T ss_dssp EEEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH--
T ss_pred EEEEEccCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHHHHHHHHHh--
Confidence 456666775 5789999999999999999999995 6899999999999999 6789999999999884
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhhh---h-hhHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQ---S-TIPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
+.++++|+||||||.+++.+++.+ |++++++|++++..+....... . ....+..+.................
T Consensus 84 --~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (271)
T 3ia2_A 84 --DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNA- 160 (271)
T ss_dssp --TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred --CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHHHHHHHhhH-
Confidence 457899999999999777666654 9999999999875543211100 0 0000000000000000000000000
Q ss_pred hhhhHHHHHhh-ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEeeCCC
Q 005190 266 PLKMAMDNVAK-RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 266 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
. ...... ................. .. ........... ..+....+.++++|+|+|+|++|
T Consensus 161 ~----~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D 222 (271)
T 3ia2_A 161 P----FYGINKGQVVSQGVQTQTLQIALL-----------AS---LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp H----HHTGGGTCCCCHHHHHHHHHHHHH-----------SC---HHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTC
T ss_pred h----hhccccccccCHHHHHHHHhhhhh-----------cc---HHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCC
Confidence 0 000000 00000000000000000 00 01111111111 11223567889999999999999
Q ss_pred CCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 344 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
.++|.+...+.+.+..+++++++++++||++++|+|+++++.|.+
T Consensus 223 ~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 267 (271)
T 3ia2_A 223 QIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLA 267 (271)
T ss_dssp SSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHH
Confidence 999988534566778899999999999999999999999999994
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=236.60 Aligned_cols=240 Identities=13% Similarity=0.136 Sum_probs=156.4
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHHhh
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~~~ 189 (709)
+|...|+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 12 ~~~~~G~---g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~-- 86 (271)
T 1wom_A 12 HVKVKGS---GKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEA-- 86 (271)
T ss_dssp TCEEEEC---CSSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHH--
T ss_pred eeEeecC---CCCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHH--
Confidence 3445554 457899999999999999999999988999999999999987 356788999999887
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh--hh-hhh-HHHhhchhhhHHhHHHhhhhhcCc
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--LQ-STI-PLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++........ .. ... .....+..........+....
T Consensus 87 --l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 161 (271)
T 1wom_A 87 --LDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVF--- 161 (271)
T ss_dssp --TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHH---
T ss_pred --cCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHH---
Confidence 456789999999999999999999999999999999864321111 00 000 000000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
..............+.+...... ............. ...+....+.++++|+|+|+|++|.+
T Consensus 162 -----~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lvi~G~~D~~ 223 (271)
T 1wom_A 162 -----AATVLNQPDRPEIKEELESRFCS-----------TDPVIARQFAKAA--FFSDHREDLSKVTVPSLILQCADDII 223 (271)
T ss_dssp -----HHHHHCCTTCHHHHHHHHHHHHH-----------SCHHHHHHHHHHH--HSCCCHHHHTTCCSCEEEEEEETCSS
T ss_pred -----HHHHhcCCCchHHHHHHHHHHhc-----------CCcHHHHHHHHHH--hCcchHHhccccCCCEEEEEcCCCCc
Confidence 00000000000111111111100 0111111110000 11122345688999999999999999
Q ss_pred CCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 224 ~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 266 (271)
T 1wom_A 224 APATV-GKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDY 266 (271)
T ss_dssp SCHHH-HHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHHHHH
Confidence 99996 88999999999999999999999999999999999943
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-27 Score=238.53 Aligned_cols=242 Identities=12% Similarity=0.104 Sum_probs=156.4
Q ss_pred cccccCCCCC-CCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccC
Q 005190 120 FSPLECGSHT-RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 120 ~~~~~~g~p~-~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~ 192 (709)
++|.+.|++. .++|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++++
T Consensus 3 l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~~l---- 78 (255)
T 3bf7_A 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTLDAL---- 78 (255)
T ss_dssp CCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCCSCCCHHHHHHHHHHHHHHH----
T ss_pred eeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHHc----
Confidence 4566666421 1467899999999999999999999988899999999999998 6789999999999883
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
+.++++|+||||||.+|+.+|.++|++|+++|++++........ .....+..+. .......... .....
T Consensus 79 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~--~~~~~~~~~~--------~~~~~~~~~~-~~~~~ 147 (255)
T 3bf7_A 79 QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAIN--------AVSESDAQTR-QQAAA 147 (255)
T ss_dssp TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSC--CCHHHHHHHH--------HHHHSCCCSH-HHHHH
T ss_pred CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcc--cHHHHHHHHH--------hccccccccH-HHHHH
Confidence 45789999999999999999999999999999997643211110 0000010000 0000000000 00000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
.+..... ........... . .... -......+. ....... ....+.++++|+|+|+|++|.+++++. .
T Consensus 148 ~~~~~~~-~~~~~~~~~~~--~--~~~~--~~~~~~~~~---~~~~~~~--~~~~l~~i~~P~l~i~G~~D~~~~~~~-~ 214 (255)
T 3bf7_A 148 IMRQHLN-EEGVIQFLLKS--F--VDGE--WRFNVPVLW---DQYPHIV--GWEKIPAWDHPALFIPGGNSPYVSEQY-R 214 (255)
T ss_dssp HHTTTCC-CHHHHHHHHTT--E--ETTE--ESSCHHHHH---HTHHHHH--CCCCCCCCCSCEEEECBTTCSTTCGGG-H
T ss_pred HHhhhcc-hhHHHHHHHHh--c--cCCc--eeecHHHHH---hhhhhcc--ccccccccCCCeEEEECCCCCCCCHHH-H
Confidence 0000000 01111100000 0 0000 000000110 0000000 012367899999999999999999987 8
Q ss_pred HHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 353 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 353 ~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 215 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 251 (255)
T 3bf7_A 215 DDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRY 251 (255)
T ss_dssp HHHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHCCCCeEEEeCCCCCccccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999943
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=236.27 Aligned_cols=242 Identities=11% Similarity=0.091 Sum_probs=157.6
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|.+.|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++++
T Consensus 14 ~l~y~~~g~----g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l-- 87 (277)
T 1brt_A 14 DLYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL-- 87 (277)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH--
T ss_pred EEEEEEcCC----CCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh--
Confidence 345666664 5579999999999999999999996 4799999999999998 6789999999999984
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCCC-ceeEEEEecCCCCcchhhhhh-----hhHHHhhchhhhH----HhHHHhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQS-----TIPLLELIPGQIT----TMLSSTLS 260 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P~-~v~~lVl~~p~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~ 260 (709)
+.++++|+||||||.+|+.+|.++|+ +|+++|++++..+........ ....+..+..... ........
T Consensus 88 --~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (277)
T 1brt_A 88 --DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN 165 (277)
T ss_dssp --TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred --CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHH
Confidence 45789999999999999999999999 999999999854321110000 0000000000000 00000000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
.+.... ....... ..+........... .........+.....+....+.++++|+|+|+|
T Consensus 166 ~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 225 (277)
T 1brt_A 166 DFYNLD-----ENLGTRI-SEEAVRNSWNTAAS--------------GGFFAAAAAPTTWYTDFRADIPRIDVPALILHG 225 (277)
T ss_dssp HHTTHH-----HHBTTTB-CHHHHHHHHHHHHH--------------SCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEE
T ss_pred HHhhcc-----ccccccC-CHHHHHHHHHHHhc--------------cchHHHHHHHHHHhccchhhcccCCCCeEEEec
Confidence 000000 0000000 00111111110000 000011111111111223467889999999999
Q ss_pred CCCCCCCcHHHH-HHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEG-ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~-~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|.+++.+. . +.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 226 ~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 274 (277)
T 1brt_A 226 TGDRTLPIEN-TARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAF 274 (277)
T ss_dssp TTCSSSCGGG-THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred CCCccCChHH-HHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHHHH
Confidence 9999999987 6 8999999999999999999999999999999999944
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=235.09 Aligned_cols=246 Identities=13% Similarity=0.190 Sum_probs=158.0
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcc---cHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~ 187 (709)
.++|.+.|+ +|+|||+||++.+.. .|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 16 ~l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 91 (282)
T 1iup_A 16 LTNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDA 91 (282)
T ss_dssp EEEEEEECC----SSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEecCC----CCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 456666665 578999999976655 67778888988999999999999988 568999999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++...... ............+. ...+..++.....+..
T Consensus 92 ----l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 164 (282)
T 1iup_A 92 ----LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFD-VTEGLNAVWGYTPS--IENMRNLLDIFAYDRS 164 (282)
T ss_dssp ----TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCC-CCHHHHHHHTCCSC--HHHHHHHHHHHCSSGG
T ss_pred ----hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCC-CCHHHHHHhcCCCc--HHHHHHHHHHhhcCcc
Confidence 5567899999999999999999999999999999998654211 00000011110000 0001111111110000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 347 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~ 347 (709)
....+.....+... ........+......... ....... .....+.++++|+|+|+|++|.+++
T Consensus 165 ----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~l~~i~~P~lii~G~~D~~~p 228 (282)
T 1iup_A 165 ----------LVTDELARLRYEAS-IQPGFQESFSSMFPEPRQ----RWIDALA-SSDEDIKTLPNETLIIHGREDQVVP 228 (282)
T ss_dssp ----------GCCHHHHHHHHHHH-TSTTHHHHHHHHSCSSTH----HHHHHHC-CCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred ----------cCCHHHHHHHHhhc-cChHHHHHHHHHHhcccc----ccccccc-cchhhhhhcCCCEEEEecCCCCCCC
Confidence 00001111100000 000000000000000000 0000000 0114678899999999999999999
Q ss_pred cHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhcccccc
Q 005190 348 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 394 (709)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r 394 (709)
.+. ++.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 229 ~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 272 (282)
T 1iup_A 229 LSS-SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV--EFFNE 272 (282)
T ss_dssp HHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHT
T ss_pred HHH-HHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHH--HHHhc
Confidence 997 889999999999999999999999999999999999 55543
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=237.40 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=158.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCC---CCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~ 187 (709)
.++|.+.|+. ..|+|||+||++ ++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 25 ~l~y~~~G~g--~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 102 (291)
T 2wue_A 25 KLHYHEAGVG--NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQ 102 (291)
T ss_dssp EEEEEEECTT--CSSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCC--CCCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 3456666651 235899999997 777889999999988899999999999998 458889999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh-h---hhhhhHHHhhchhhhHHhHHHhhhhhc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS-V---LQSTIPLLELIPGQITTMLSSTLSLMT 263 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (709)
+ +.++++|+||||||.+|+.+|.++|++|+++|++++....... . ......................+....
T Consensus 103 l----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (291)
T 2wue_A 103 L----GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMV 178 (291)
T ss_dssp H----TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSC
T ss_pred h----CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHHHHHHHHHHhc
Confidence 3 4578999999999999999999999999999999986532110 0 000000000000000000001111111
Q ss_pred CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh------hHhhhhcccCCccEEE
Q 005190 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS------AYANSRLHAVKAQMLV 337 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLv 337 (709)
.+. .. ...+.....+... .....+........... ......+.++++|+|+
T Consensus 179 ~~~---------~~-~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 235 (291)
T 2wue_A 179 YDK---------NL-ITPELVDQRFALA-------------STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLL 235 (291)
T ss_dssp SSG---------GG-SCHHHHHHHHHHH-------------TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEE
T ss_pred cCc---------cc-CCHHHHHHHHHHh-------------cCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEE
Confidence 000 00 0001111111000 01111111111110000 1111567889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhcccccc
Q 005190 338 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 394 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r 394 (709)
|+|++|.+++.+. ++.+++.+|++++++++++||++++|+|+++++.|. .|+..
T Consensus 236 i~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 289 (291)
T 2wue_A 236 IWGREDRVNPLDG-ALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTI--EFLGG 289 (291)
T ss_dssp EEETTCSSSCGGG-GHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHH--HHTTC
T ss_pred EecCCCCCCCHHH-HHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHHhc
Confidence 9999999999997 889999999999999999999999999999999999 45543
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=237.07 Aligned_cols=244 Identities=15% Similarity=0.163 Sum_probs=157.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~ 190 (709)
-++|.+.|+ +++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 7 ~~~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~--- 79 (269)
T 2xmz_A 7 KFYEANVET----NQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK--- 79 (269)
T ss_dssp EEECCSSCC----SEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGG---
T ss_pred eEEEEEcCC----CCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH---
Confidence 456777776 45799999999999999999999988899999999999988 568889999999887
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHh--hchhhhH-HhHHHhhhhhcCchh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE--LIPGQIT-TMLSSTLSLMTGDPL 267 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++......... ....... .....+. .........+...+.
T Consensus 80 -l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
T 2xmz_A 80 -YKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEAN-QLERRLVDDARAKVLDIAGIELFVNDWEKLPL 157 (269)
T ss_dssp -GTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHH-HHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGG
T ss_pred -cCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchh-HHHHhhhhhHHHHhhccccHHHHHHHHHhCcc
Confidence 4467899999999999999999999999999999998554322111 0000000 0000000 000000000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH-HhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
... .... .......+..... ......+........ .......+.+.++++|+|+|+|++|.++
T Consensus 158 ~~~----~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 221 (269)
T 2xmz_A 158 FQS----QLEL-PVEIQHQIRQQRL-----------SQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKF 221 (269)
T ss_dssp GGG----GGGS-CHHHHHHHHHHHH-----------TSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHH
T ss_pred ccc----cccC-CHHHHHHHHHHHh-----------ccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCccc
Confidence 000 0000 0000111110000 001111111111110 0111223567889999999999999999
Q ss_pred CcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 347 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 347 ~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+... .+ +.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 222 ~~~~-~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 262 (269)
T 2xmz_A 222 VQIA-KK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMILGF 262 (269)
T ss_dssp HHHH-HH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred CHHH-HH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHHHH
Confidence 8875 55 88899999999999999999999999999999944
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-27 Score=244.04 Aligned_cols=256 Identities=15% Similarity=0.151 Sum_probs=158.0
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
.++|.+.|+. ..|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 18 ~l~y~~~G~g--~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~a~dl~~ll~~---- 91 (316)
T 3afi_E 18 SMAYRETGAQ--DAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHVRYLDAFIEQ---- 91 (316)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH----
T ss_pred EEEEEEeCCC--CCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Confidence 4566666651 123899999999999999999999988899999999999998 679999999999998
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcch-hhhh------------hhhHHHhhchhhhHHhHHHh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK-SVLQ------------STIPLLELIPGQITTMLSST 258 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~ 258 (709)
++.++++|+||||||.+|+.+|.++|++|+++|++++..+... .... .....+..+..... ....
T Consensus 92 l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 169 (316)
T 3afi_E 92 RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGE--GEAM 169 (316)
T ss_dssp TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTH--HHHH
T ss_pred cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCch--hhHH
Confidence 5567999999999999999999999999999999987432110 0000 00000000000000 0000
Q ss_pred hhhhcCchhhh-HHHHHhhccCCchHHHHHHHhHH--HhhcchhhhhhcCChh-hHHHHHHHHHHhhhHhhhhcccCCcc
Q 005190 259 LSLMTGDPLKM-AMDNVAKRLSLQPTIQDLSQDLV--ALSSYLPVLADILPKE-TLLWKIELLKAASAYANSRLHAVKAQ 334 (709)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P 334 (709)
... ...+.. ............+.......... ................ ......... ......+.++++|
T Consensus 170 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~P 243 (316)
T 3afi_E 170 ILE--ANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEAL----QSAHAALAASSYP 243 (316)
T ss_dssp HTT--SCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHH----HHHHHHHHHCCSC
T ss_pred Hhc--cchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHH----HHHHHhhhccCCC
Confidence 000 000000 00000000000000111000000 0000000000000000 000000000 1112456789999
Q ss_pred EEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 335 MLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 335 vLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|+|+|++|.+++.+. .+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 244 ~Lvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~~f 297 (316)
T 3afi_E 244 KLLFTGEPGALVSPEF-AERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAGW 297 (316)
T ss_dssp EEEEEEEECSSSCHHH-HHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCccCHHH-HHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHHHH
Confidence 9999999999999986 89999999999999999999999999999999999943
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.6e-26 Score=233.56 Aligned_cols=244 Identities=12% Similarity=0.095 Sum_probs=153.6
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCC-----------HHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS-----------FTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss-----------~~~~~~dl~~~l~~ 187 (709)
.++|.+.|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.|+ ++++++|+.+++++
T Consensus 20 ~l~y~~~G~----g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~ 95 (294)
T 1ehy_A 20 KIHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDA 95 (294)
T ss_dssp EEEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCCccccccCcCHHHHHHHHHHHHHH
Confidence 456666664 678999999999999999999999888999999999999882 46788899999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhH----HHhhchhhhHHhHHHhhhhhc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP----LLELIPGQITTMLSSTLSLMT 263 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 263 (709)
++.++++|+||||||.+|+.+|.++|++|+++|++++.............. +...... ..++..+ ..
T Consensus 96 ----l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~ 166 (294)
T 1ehy_A 96 ----LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQ---LDMAVEV--VG 166 (294)
T ss_dssp ----TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTT---CHHHHHH--HT
T ss_pred ----cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecC---cchhHHH--hc
Confidence 556789999999999999999999999999999999743211110000000 0000000 0000000 00
Q ss_pred Cch--hhhHHHHHhhc-----cCC-chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHh-----hhhccc
Q 005190 264 GDP--LKMAMDNVAKR-----LSL-QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYA-----NSRLHA 330 (709)
Q Consensus 264 ~~~--~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~ 330 (709)
... ........... ... .+....+.... .................... ...+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (294)
T 1ehy_A 167 SSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNC-------------MKPDNIHGGFNYYRANIRPDAALWTDLDHTM 233 (294)
T ss_dssp SCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHH-------------TSTTHHHHHHHHHHHHSSSSCCCCCTGGGSC
T ss_pred cchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHh-------------cCCcccchHHHHHHHHHhhhhhhcCCcccCc
Confidence 000 00000000000 000 01011111000 01111111111111110000 113458
Q ss_pred CCccEEEEeeCCCCCCCc-HHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 331 VKAQMLVLCSGKDQLMPS-QEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 331 i~~PvLvi~G~~D~~v~~-~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++|+|+|+|++|.+++. .. .+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 234 i~~P~Lvi~G~~D~~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 292 (294)
T 1ehy_A 234 SDLPVTMIWGLGDTCVPYAPL-IEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTA 292 (294)
T ss_dssp BCSCEEEEEECCSSCCTTHHH-HHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCcchHHH-HHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 999999999999999984 54 78888899999999999999999999999999999954
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-26 Score=234.52 Aligned_cols=243 Identities=21% Similarity=0.188 Sum_probs=155.6
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcc-cHHHHHHHhcCCceEEEEeCCCCCCC----------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL-GLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~-~~~~~~~~L~~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~ 187 (709)
.++|.+.|++ ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 14 ~l~~~~~G~~--~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~ 91 (286)
T 2yys_A 14 ELYVEDVGPV--EGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEA 91 (286)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEEeecCC--CCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHHHHHHHHHHH
Confidence 3556666642 4678999999999999 89999999988999999999999988 346888999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh---chhh-hHHhHHHhhhhhc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL---IPGQ-ITTMLSSTLSLMT 263 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~ 263 (709)
++.++++|+||||||.+|+.+|.++|+ |+++|++++...... . ....+.. .+.. ....+...+..
T Consensus 92 ----l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (286)
T 2yys_A 92 ----LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPW--L--AARLAEAAGLAPLPDPEENLKEALKR-- 160 (286)
T ss_dssp ----TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHH--H--HHHHHHHTTCCCCSCHHHHHHHHHHH--
T ss_pred ----hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHH--H--HHHHHHHhccccchhHHHHHHHHhcc--
Confidence 456789999999999999999999999 999999998652111 0 0001000 0000 00000000000
Q ss_pred CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh-hHhhhhcccCCccEEEEeeCC
Q 005190 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS-AYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLvi~G~~ 342 (709)
... ........ ........ ... .................. ...... .+....+.++++|+|+|+|++
T Consensus 161 ~~~-~~~~~~~~-~~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 228 (286)
T 2yys_A 161 EEP-KALFDRLM-FPTPRGRM---AYE------WLAEGAGILGSDAPGLAF-LRNGLWRLDYTPYLTPERRPLYVLVGER 228 (286)
T ss_dssp SCH-HHHHHHHH-CSSHHHHH---HHH------HHHHHTTCCCCSHHHHHH-HHTTGGGCBCGGGCCCCSSCEEEEEETT
T ss_pred CCh-HHHHHhhh-ccCCcccc---ChH------HHHHHHhhccccccchhh-cccccccCChhhhhhhcCCCEEEEEeCC
Confidence 000 00000000 00000000 000 000000111111111111 111111 123456788999999999999
Q ss_pred CCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 343 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|.+++.+ ++.+++ +|++++++++++||++++|+|+++++.|.+|
T Consensus 229 D~~~~~~--~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 272 (286)
T 2yys_A 229 DGTSYPY--AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFKEA 272 (286)
T ss_dssp CTTTTTT--HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHHHH
T ss_pred CCcCCHh--HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHHHH
Confidence 9999887 678888 8999999999999999999999999999954
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=233.65 Aligned_cols=249 Identities=13% Similarity=0.070 Sum_probs=156.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|...|++ ++|+|||+||++++...|..+++.|+ +||+|+++|+||||.| +++++++|+.++++++
T Consensus 11 ~l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~l~~l-- 86 (276)
T 1zoi_A 11 QIFYKDWGPR--DAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVAAVVAHL-- 86 (276)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH--
T ss_pred EEEEEecCCC--CCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Confidence 3456666642 46789999999999999999999996 5799999999999998 6789999999999984
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhh--h-hh-hHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVL--Q-ST-IPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
+.++++|+||||||.+|+.+|+.+ |++|+++|++++..+...... . .. ......+...........+......
T Consensus 87 --~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (276)
T 1zoi_A 87 --GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAG 164 (276)
T ss_dssp --TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred --CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHHHHHHHhhhc
Confidence 456899999999999999988887 999999999997543211000 0 00 0000000000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEeeCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
.+... ..................... .........+... ..+....+.++++|+|+|+|++|.
T Consensus 165 ~~~~~--~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~ 228 (276)
T 1zoi_A 165 PFYGY--NRPGVEASEGIIGNWWRQGMI--------------GSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQ 228 (276)
T ss_dssp TTTTT--TSTTCCCCHHHHHHHHHHHHH--------------SCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCS
T ss_pred ccccc--ccccccccHHHHHHHHhhhhh--------------hhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCc
Confidence 00000 000000000111111100000 0000111111111 112235677899999999999999
Q ss_pred CCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 345 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 345 ~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++.+...+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 273 (276)
T 1zoi_A 229 IVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAF 273 (276)
T ss_dssp SSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred ccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHHH
Confidence 999874256777889999999999999999999999999999954
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=239.45 Aligned_cols=251 Identities=14% Similarity=0.068 Sum_probs=154.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC-CceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|.+ +++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.+++++
T Consensus 35 ~l~y~~~G~~-~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~- 112 (310)
T 1b6g_A 35 RAHYLDEGNS-DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIER- 112 (310)
T ss_dssp EEEEEEEECT-TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHH-
T ss_pred EEEEEEeCCC-CCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHH-
Confidence 4667776642 1167899999999999999999999975 599999999999999 568899999999998
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
++.++++|+||||||.+|+.+|.++|++|+++|++++...................+.... .+.........-...
T Consensus 113 ---l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (310)
T 1b6g_A 113 ---LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFT-AWKYDLVTPSDLRLD 188 (310)
T ss_dssp ---HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHH-HHHHHHHSCSSCCHH
T ss_pred ---cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHH-HHHHHhccCchhhhh
Confidence 4467899999999999999999999999999999998542101000000000000000000 000000000000000
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH-------HhhhHhhhhcc-cCCccEEEEee
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK-------AASAYANSRLH-AVKAQMLVLCS 340 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~-~i~~PvLvi~G 340 (709)
.......... ..+....+.... ................. .......+.+. ++++|+|+|+|
T Consensus 189 ~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G 257 (310)
T 1b6g_A 189 QFMKRWAPTL-TEAEASAYAAPF----------PDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIG 257 (310)
T ss_dssp HHHHHHSTTC-CHHHHHHHHTTC----------SSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEE
T ss_pred hHHhhcCCCC-CHHHHHHHhccc----------CCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEec
Confidence 0000000000 000000000000 00000000000000000 00012235567 89999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEEE--cCCCccccccChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRNF--YGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~i--~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|.+++ .. .+.+++.+|+++++++ ++|||++++ +|+++++.|.+|
T Consensus 258 ~~D~~~~-~~-~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~F 305 (310)
T 1b6g_A 258 MKDKLLG-PD-VMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALKH 305 (310)
T ss_dssp TTCSSSS-HH-HHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHHHH
T ss_pred cCcchhh-hH-HHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHHHH
Confidence 9999999 75 8899999999999888 999999999 999999999943
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=228.89 Aligned_cols=242 Identities=12% Similarity=0.072 Sum_probs=155.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|.+.|+ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.+++++
T Consensus 10 ~l~y~~~g~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~--- 82 (274)
T 1a8q_A 10 EIFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTD--- 82 (274)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH---
T ss_pred EEEEEecCC----CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---
Confidence 345666664 6789999999999999999999996 5799999999999998 678999999999998
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhh---hhh-hHHHhhchhhhH----HhHHHhhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVL---QST-IPLLELIPGQIT----TMLSSTLSL 261 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~ 261 (709)
.+.++++|+||||||.+|+.+|+++ |++|+++|++++..+...... ... ...+..+..... .....+...
T Consensus 83 -l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (274)
T 1a8q_A 83 -LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEG 161 (274)
T ss_dssp -TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHHHHHHHhccc
Confidence 4457899999999999999988776 999999999997543211000 000 000000000000 000000000
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEee
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~G 340 (709)
+.... ...........+..... .. .............. .......+.++++|+|+|+|
T Consensus 162 ~~~~~-------~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 220 (274)
T 1a8q_A 162 FFSAN-------RPGNKVTQGNKDAFWYM-------------AM-AQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHG 220 (274)
T ss_dssp HTTTT-------STTCCCCHHHHHHHHHH-------------HT-TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEE
T ss_pred ccccc-------cccccccHHHHHHHHHH-------------hh-hcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEec
Confidence 00000 00000000111111100 00 00111111111111 11223567889999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCcccccc--ChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE--DGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le--~p~~~~~~I~~~ 389 (709)
++|.+++.+...+.+.+..+++++++++++||++++| +|+++++.|.+|
T Consensus 221 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~f 271 (274)
T 1a8q_A 221 DDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEF 271 (274)
T ss_dssp TTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHH
T ss_pred CcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHHH
Confidence 9999999884256677888999999999999999999 999999999944
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=231.00 Aligned_cols=240 Identities=18% Similarity=0.183 Sum_probs=148.8
Q ss_pred cccccCCCCCCCCC-EEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccC
Q 005190 120 FSPLECGSHTRDSP-LLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 120 ~~~~~~g~p~~~~p-~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~ 192 (709)
++|.+.|+ +| +|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.+ . .
T Consensus 4 l~~~~~G~----g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~---~----l 72 (258)
T 1m33_A 4 IWWQTKGQ----GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ---Q----A 72 (258)
T ss_dssp CCEEEECC----CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHHHHT---T----S
T ss_pred eEEEEecC----CCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCCCCcCHHHHHHHHHH---H----h
Confidence 45666665 56 899999999999999999999998999999999999999 44555444332 2 3
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhhhh-HHHhhchhhhHHhHHHhhhhhcCchhhhH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTI-PLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (709)
+ ++++|+||||||.+|+.+|.++|++|+++|++++........ +.... .....+..............+...
T Consensus 73 ~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 146 (258)
T 1m33_A 73 P-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLAL----- 146 (258)
T ss_dssp C-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred C-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHH-----
Confidence 3 689999999999999999999999999999998754332111 10000 000000000000000000000000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
..............+....... .......+........ .......+.++++|+|+|+|++|.+++.+.
T Consensus 147 --~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~ 214 (258)
T 1m33_A 147 --QTMGTETARQDARALKKTVLAL--------PMPEVDVLNGGLEILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRKV 214 (258)
T ss_dssp --TSTTSTTHHHHHHHHHHHHHTS--------CCCCHHHHHHHHHHHH--HCCCTTGGGGCCSCEEEEEETTCSSSCGGG
T ss_pred --HhcCCccchhhHHHHHHHHHhc--------cCCcHHHHHHHHHHHH--hCCHHHHHhhCCCCEEEEeecCCCCCCHHH
Confidence 0000000000001110000000 0000111111111111 112235678899999999999999999986
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 215 -~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 252 (258)
T 1m33_A 215 -VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVAL 252 (258)
T ss_dssp -CC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred -HHHHHHhCccceEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 88888889999999999999999999999999999944
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=231.76 Aligned_cols=242 Identities=14% Similarity=0.140 Sum_probs=155.5
Q ss_pred cccccCCCCCCCCCEEEEeCCCC---CCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHH----HHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGL----VKLVEST 184 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~----~~dl~~~ 184 (709)
++|.+.|++ +.|+|||+||++ ++...|..+++.|+++|+|+++|+||||.| +++++ ++|+.++
T Consensus 19 l~y~~~g~~--g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~ 96 (285)
T 1c4x_A 19 SHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGL 96 (285)
T ss_dssp EEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC--CCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhhhhhHHHHHHHH
Confidence 456666631 345599999997 667788889999988899999999999988 56788 8999999
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcC
Q 005190 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 185 l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (709)
++++ +.++++|+||||||.+|+.+|.++|++|+++|++++..............................+.....
T Consensus 97 l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (285)
T 1c4x_A 97 MNHF----GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY 172 (285)
T ss_dssp HHHH----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSS
T ss_pred HHHh----CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccHHHHHHHHHHhhc
Confidence 8873 457899999999999999999999999999999998653211100000001110000000001111111110
Q ss_pred chhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH--H-hh---hHhhhhcccCCccEEEE
Q 005190 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK--A-AS---AYANSRLHAVKAQMLVL 338 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~---~~~~~~l~~i~~PvLvi 338 (709)
+..... ...+.....+... ...........+.. . .. ......+.++++|+|+|
T Consensus 173 ~~~~~~--------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 231 (285)
T 1c4x_A 173 DPENFP--------GMEEIVKSRFEVA-------------NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVF 231 (285)
T ss_dssp CSTTCT--------THHHHHHHHHHHH-------------HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEE
T ss_pred Cccccc--------CcHHHHHHHHHhc-------------cCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEE
Confidence 000000 0001111100000 00111111111110 0 00 00224568899999999
Q ss_pred eeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 339 CSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 339 ~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|++|.+++.+. ++.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 232 ~G~~D~~~p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 281 (285)
T 1c4x_A 232 HGRQDRIVPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEH 281 (285)
T ss_dssp EETTCSSSCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHH
T ss_pred EeCCCeeeCHHH-HHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHHHH
Confidence 999999999997 88999999999999999999999999999999999943
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=229.83 Aligned_cols=249 Identities=13% Similarity=0.052 Sum_probs=155.6
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|...|.+ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++++
T Consensus 10 ~l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l-- 85 (275)
T 1a88_A 10 NIFYKDWGPR--DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEAL-- 85 (275)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH--
T ss_pred EEEEEEcCCC--CCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHHHHHHHHc--
Confidence 3456666642 46789999999999999999999996 5799999999999998 6789999999999984
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhhh---hh-hHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQ---ST-IPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
+.++++|+||||||.+|+.+|+.+ |++|+++|++++..+....... .. ...+..+...........+......
T Consensus 86 --~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (275)
T 1a88_A 86 --DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSG 163 (275)
T ss_dssp --TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred --CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHHhhhcc
Confidence 456899999999999999988887 9999999999975432111000 00 0000000000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEeeCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
..... .................... ..........+... .......+.++++|+|+|+|++|.
T Consensus 164 ~~~~~--~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 227 (275)
T 1a88_A 164 PFYGF--NREGATVSQGLIDHWWLQGM--------------MGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQ 227 (275)
T ss_dssp TTTTT--TSTTCCCCHHHHHHHHHHHH--------------HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCS
T ss_pred ccccc--cCcccccCHHHHHHHHHHhh--------------hcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCc
Confidence 00000 00000000011111110000 00001111111111 112234567899999999999999
Q ss_pred CCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 345 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 345 ~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++.+...+.+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 272 (275)
T 1a88_A 228 VVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAF 272 (275)
T ss_dssp SSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHHH
Confidence 999874256677888999999999999999999999999999954
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=231.05 Aligned_cols=241 Identities=17% Similarity=0.191 Sum_probs=154.9
Q ss_pred ccccccCCCCCCCCCEEEEeCCCC---CCcccHHHHH-HHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQH-QRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVR 186 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~---~s~~~~~~~~-~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~ 186 (709)
.++|.+.|+ +.++|||+||++ ++...|..++ +.|+++|+|+++|+||||.| +++++++|+.++++
T Consensus 26 ~l~y~~~g~---g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 102 (289)
T 1u2e_A 26 RIHFNDCGQ---GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVD 102 (289)
T ss_dssp EEEEEEECC---CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHH
T ss_pred EEEEeccCC---CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 455666665 333899999998 5666787788 88888899999999999998 35788888888888
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhh----hhhHHHhhchhhhHHhHHHhhhhh
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ----STIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
+ .+.++++|+||||||.+|+.+|.++|++|+++|++++.......... ....................+...
T Consensus 103 ~----l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
T 1u2e_A 103 Q----LDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIF 178 (289)
T ss_dssp H----TTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTT
T ss_pred H----hCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHh
Confidence 7 45678999999999999999999999999999999985431110000 000000000000000000111100
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh---hhHhhhhcccCCccEEEEe
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA---SAYANSRLHAVKAQMLVLC 339 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLvi~ 339 (709)
..+. .....+........... ....+......+... .......+.++++|+|+|+
T Consensus 179 ~~~~----------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 236 (289)
T 1u2e_A 179 VFDT----------SDLTDALFEARLNNMLS------------RRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVW 236 (289)
T ss_dssp SSCT----------TSCCHHHHHHHHHHHHH------------THHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEE
T ss_pred hcCc----------ccCCHHHHHHHHHHhhc------------ChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEe
Confidence 0000 00000111111100000 011111111111100 0112356788999999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|++|.+++++. ++.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 237 G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 285 (289)
T 1u2e_A 237 GRNDRFVPMDA-GLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNF 285 (289)
T ss_dssp ETTCSSSCTHH-HHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHHHH
T ss_pred eCCCCccCHHH-HHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHHHH
Confidence 99999999997 89999999999999999999999999999999999944
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=233.26 Aligned_cols=219 Identities=16% Similarity=0.191 Sum_probs=152.7
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
.+.|||+||++++...|..+++.|+ +||+|+++|+||||.| +++++++|+.++++.+... .++++|+|||
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~v~lvG~S 128 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEER--CDVLFMTGLS 128 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHH--CSEEEEEEET
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhC--CCeEEEEEEC
Confidence 4569999999999999999999995 6899999999999999 7789999999999987654 3589999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
|||.+|+.+|.++|++|+++|++++............ .+....+. .+.....+. .. ..
T Consensus 129 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~------------~~-~~ 186 (281)
T 4fbl_A 129 MGGALTVWAAGQFPERFAGIMPINAALRMESPDLAAL-AFNPDAPA--------ELPGIGSDI------------KA-EG 186 (281)
T ss_dssp HHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHH-HTCTTCCS--------EEECCCCCC------------SS-TT
T ss_pred cchHHHHHHHHhCchhhhhhhcccchhcccchhhHHH-HHhHhhHH--------hhhcchhhh------------hh-HH
Confidence 9999999999999999999999998665432211110 00000000 000000000 00 00
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC--C
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--K 361 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~--~ 361 (709)
...... ...+...+.....+. ......+.+|++|+|+|+|++|.+++++. ++.+.+.++ +
T Consensus 187 ~~~~~~-------------~~~~~~~~~~~~~~~----~~~~~~l~~i~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~~ 248 (281)
T 4fbl_A 187 VKELAY-------------PVTPVPAIKHLITIG----AVAEMLLPRVKCPALIIQSREDHVVPPHN-GELIYNGIGSTE 248 (281)
T ss_dssp CCCCCC-------------SEEEGGGHHHHHHHH----HHHHHHGGGCCSCEEEEEESSCSSSCTHH-HHHHHHHCCCSS
T ss_pred HHHhhh-------------ccCchHHHHHHHHhh----hhccccccccCCCEEEEEeCCCCCcCHHH-HHHHHHhCCCCC
Confidence 000000 000111111111111 12235678899999999999999999997 899998875 4
Q ss_pred cEEEEEcCCCccccccC-hhhHHHHHhhcccccc
Q 005190 362 CEPRNFYGHGHFLLLED-GVDLVTIIKGASYYRR 394 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~-p~~~~~~I~~~~f~~r 394 (709)
+++++++++||++++|+ ++++.+.|. .|+++
T Consensus 249 ~~l~~~~~~gH~~~~e~~~e~v~~~i~--~FL~~ 280 (281)
T 4fbl_A 249 KELLWLENSYHVATLDNDKELILERSL--AFIRK 280 (281)
T ss_dssp EEEEEESSCCSCGGGSTTHHHHHHHHH--HHHHT
T ss_pred cEEEEECCCCCcCccccCHHHHHHHHH--HHHHh
Confidence 58999999999999884 888999888 45543
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=229.04 Aligned_cols=247 Identities=13% Similarity=0.036 Sum_probs=155.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|...|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.+++++
T Consensus 10 ~l~y~~~g~----~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~--- 82 (273)
T 1a8s_A 10 QIYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEH--- 82 (273)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH---
T ss_pred EEEEEEcCC----CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Confidence 345666664 5789999999999999999999996 5799999999999998 678999999999988
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhh---hhh-hHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVL---QST-IPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
.+.++++|+||||||.+|+.+|+.+ |++|+++|++++..+...... ... ......+...........+......
T Consensus 83 -l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T 1a8s_A 83 -LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASG 161 (273)
T ss_dssp -TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHHHHHHHhhcc
Confidence 4567899999999999999988776 999999999997543211000 000 0000000000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEeeCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
.+... ..................... ............. .......+.++++|+|+|+|++|.
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
T 1a8s_A 162 PFFGF--NQPGAKSSAGMVDWFWLQGMA--------------AGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQ 225 (273)
T ss_dssp TSSST--TSTTCCCCHHHHHHHHHHHHH--------------SCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCS
T ss_pred cccCc--CCcccccCHHHHHHHHHhccc--------------cchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCc
Confidence 00000 000000000111111100000 0001111111111 112234578899999999999999
Q ss_pred CCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 345 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 345 ~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++.+...+.+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 270 (273)
T 1a8s_A 226 VVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAF 270 (273)
T ss_dssp SSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHHH
Confidence 999884256777888999999999999999999999999999954
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-26 Score=231.18 Aligned_cols=242 Identities=15% Similarity=0.128 Sum_probs=155.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|.+.|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++++
T Consensus 14 ~l~y~~~g~----~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l-- 87 (279)
T 1hkh_A 14 ELYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETL-- 87 (279)
T ss_dssp EEEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH--
T ss_pred EEEEEecCC----CCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc--
Confidence 345666664 4569999999999999999999996 5799999999999998 6789999999999984
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCCC-ceeEEEEecCCCCcchhhhhhh----hHHHhhchhhhH----HhHHHhhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQST----IPLLELIPGQIT----TMLSSTLSL 261 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P~-~v~~lVl~~p~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~ 261 (709)
+.++++|+||||||.+++.+|.++|+ +|+++|++++..+......... ...+..+..... .........
T Consensus 88 --~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (279)
T 1hkh_A 88 --DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKN 165 (279)
T ss_dssp --TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhh
Confidence 45689999999999999999999999 9999999998543211110000 000000000000 000000000
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccC---CccEEEE
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAV---KAQMLVL 338 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLvi 338 (709)
..... ....... .............. ....... .............+.++ ++|+|+|
T Consensus 166 ~~~~~-----~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~~~~~~l~~i~~~~~P~lii 225 (279)
T 1hkh_A 166 FYNLD-----ENLGSRI-SEQAVTGSWNVAIG-----------SAPVAAY---AVVPAWIEDFRSDVEAVRAAGKPTLIL 225 (279)
T ss_dssp HHTHH-----HHBTTTB-CHHHHHHHHHHHHT-----------SCTTHHH---HTHHHHTCBCHHHHHHHHHHCCCEEEE
T ss_pred hhhcc-----cCCcccc-cHHHHHhhhhhhcc-----------CcHHHHH---HHHHHHhhchhhhHHHhccCCCCEEEE
Confidence 00000 0000000 00111111110000 0001110 11111111122345667 9999999
Q ss_pred eeCCCCCCCcHHHH-HHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 339 CSGKDQLMPSQEEG-ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 339 ~G~~D~~v~~~~~~-~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|++|.+++.+. . +.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 226 ~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 276 (279)
T 1hkh_A 226 HGTKDNILPIDA-TARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTF 276 (279)
T ss_dssp EETTCSSSCTTT-THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred EcCCCccCChHH-HHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHHHH
Confidence 999999999886 6 8899999999999999999999999999999999954
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=232.32 Aligned_cols=248 Identities=14% Similarity=0.110 Sum_probs=161.4
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
.+.|...|++ ++|+|||+||++++...|..+.+.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 21 ~l~~~~~g~~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~---- 94 (299)
T 3g9x_A 21 RMHYVDVGPR--DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEA---- 94 (299)
T ss_dssp EEEEEEESCS--SSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHHHHHHHHHHH----
T ss_pred EEEEEecCCC--CCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHHHHHHHHHHH----
Confidence 3455666653 467899999999999999999999999999999999999998 779999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-hhh-hhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQS-TIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
.+.++++|+||||||.+|+.+|.++|++++++|++++........ +.. ....+..+.... ....+..........
T Consensus 95 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 171 (299)
T 3g9x_A 95 LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTAD---VGRELIIDQNAFIEG 171 (299)
T ss_dssp TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSS---HHHHHHTTSCHHHHT
T ss_pred hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCC---cchhhhccchhhHHH
Confidence 456789999999999999999999999999999999654433111 100 001111100000 000000000000000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHH------------HHhhhHhhhhcccCCccEEE
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELL------------KAASAYANSRLHAVKAQMLV 337 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~i~~PvLv 337 (709)
...................... ............. ..........+.++++|+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~ 238 (299)
T 3g9x_A 172 ALPKCVVRPLTEVEMDHYREPF-------------LKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLL 238 (299)
T ss_dssp HHHHTCSSCCCHHHHHHHHGGG-------------SSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred hhhhhhccCCCHHHHHHHHHHh-------------ccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEE
Confidence 0000000000001111100000 0000000000000 00111223456889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 338 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|+|++|.+++++. .+.+.+.++++++++++++||++++|+|+++++.|.++
T Consensus 239 i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~ 289 (299)
T 3g9x_A 239 FWGTPGVLIPPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARW 289 (299)
T ss_dssp EEEEECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHH
T ss_pred EecCCCCCCCHHH-HHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHHH
Confidence 9999999999997 99999999999999999999999999999999999965
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=229.41 Aligned_cols=240 Identities=12% Similarity=0.052 Sum_probs=151.3
Q ss_pred ccccccC--CCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005190 119 WFSPLEC--GSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 119 ~~~~~~~--g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~ 189 (709)
.++|.+. |. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 15 ~l~y~~~~~G~---~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~~ll~~-- 89 (276)
T 2wj6_A 15 KLSYIDNQRDT---DGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQ-- 89 (276)
T ss_dssp EEEEEECCCCC---SSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHHHHHHHHHHHHHH--
T ss_pred EEEEEEecCCC---CCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Confidence 4567666 64 468899999999999999999999998999999999999998 678999999999998
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
++.++++|+||||||.+|+.+|.++ |++|+++|++++.................. +..........+..+
T Consensus 90 --l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------ 160 (276)
T 2wj6_A 90 --LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKD-PERWREGTHGLFDVW------ 160 (276)
T ss_dssp --HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHC-TTTHHHHHHHHHHHH------
T ss_pred --hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccC-cchHHHHHHHHHHHh------
Confidence 4567899999999999999999999 999999999987532211111000000000 000000000000000
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-h--hHhhhhcccCCccEEEEeeCCCCC
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-S--AYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
..........+.+.... .......+......+... . ......+.++++|+++++|..|..
T Consensus 161 ------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~ 223 (276)
T 2wj6_A 161 ------LDGHDEKRVRHHLLEEM-----------ADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPT 223 (276)
T ss_dssp ------HTTBCCHHHHHHHHTTT-----------TTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSC
T ss_pred ------hcccchHHHHHHHHHHh-----------hhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCcc
Confidence 00000000000000000 000000000000000000 0 011245678999999988744333
Q ss_pred CC-cHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MP-SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~-~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+ .....+.+++.+|++++++++++||++++|+|++|++.|.+|
T Consensus 224 ~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~~F 268 (276)
T 2wj6_A 224 EPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIREF 268 (276)
T ss_dssp SHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHHHH
T ss_pred chhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHHHH
Confidence 22 222256788889999999999999999999999999999943
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=225.45 Aligned_cols=241 Identities=14% Similarity=0.132 Sum_probs=163.2
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~ 187 (709)
.++|...|+ +.|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.
T Consensus 10 ~l~~~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
T 4dnp_A 10 ALNVRVVGS---GERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDA 86 (269)
T ss_dssp HTTCEEECS---CSSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHH
T ss_pred HhhhhhcCC---CCCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHh
Confidence 355666665 568999999999999999999999988999999999999999 568899999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh---hHHHhhchhhhHHhHHHhhhhhcC
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST---IPLLELIPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 264 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++............ .................+....
T Consensus 87 ----~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (269)
T 4dnp_A 87 ----LGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGF-- 160 (269)
T ss_dssp ----TTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHH--
T ss_pred ----cCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHh--
Confidence 4557999999999999999999999999999999998654322211000 0000000000000000000000
Q ss_pred chhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCC
Q 005190 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
...............+...... ............+. .......+.++++|+|+++|++|.
T Consensus 161 -------~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~ 220 (269)
T 4dnp_A 161 -------APLAVGADVPAAVREFSRTLFN-----------MRPDITLFVSRTVF--NSDMRGVLGLVKVPCHIFQTARDH 220 (269)
T ss_dssp -------HHHHHCSSCHHHHHHHHHHHHH-----------SCHHHHHHHHHHHH--TCCCGGGGGGCCSCEEEEEEESBT
T ss_pred -------hhhhccCCChhHHHHHHHHHHc-----------cCcchhhhHhhhhc--chhhHhhhccccCCEEEEecCCCc
Confidence 0000000111111112111111 11111111111111 122345678899999999999999
Q ss_pred CCCcHHHHHHHHhhcCC-cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 345 LMPSQEEGERLSSALHK-CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 345 ~v~~~~~~~~l~~~~~~-~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++. .+.+.+.+++ +++++++++||++++|+|+++++.|.+|
T Consensus 221 ~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 265 (269)
T 4dnp_A 221 SVPASV-ATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRA 265 (269)
T ss_dssp TBCHHH-HHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHHHH
T ss_pred ccCHHH-HHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 999997 9999999998 8999999999999999999999999954
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=223.88 Aligned_cols=237 Identities=14% Similarity=0.083 Sum_probs=158.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
.++|...|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 10 ~l~~~~~g~~--~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~---- 83 (264)
T 3ibt_A 10 LMTYSESGDP--HAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDA---- 83 (264)
T ss_dssp ECCEEEESCS--SSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHHHHH----
T ss_pred EEEEEEeCCC--CCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHHHHHHh----
Confidence 4556666653 578999999999999999999999988899999999999998 679999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhhhhhhHHHhhchh--hhHHhHHHhhhhhcCchhh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTIPLLELIPG--QITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 268 (709)
.+.++++|+||||||.+|+.+|.++ |++++++|++++... ....... .+..... ............+.
T Consensus 84 l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----- 154 (264)
T 3ibt_A 84 KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQ-PHPGFWQ---QLAEGQHPTEYVAGRQSFFDEWA----- 154 (264)
T ss_dssp TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSS-CCHHHHH---HHHHTTCTTTHHHHHHHHHHHHH-----
T ss_pred cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCC-cChhhcc---hhhcccChhhHHHHHHHHHHHhc-----
Confidence 4567899999999999999999999 999999999998762 1111111 1111100 01111111111110
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhh---HhhhhcccCCccEEEEeeC--CC
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASA---YANSRLHAVKAQMLVLCSG--KD 343 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~i~~PvLvi~G~--~D 343 (709)
.........+.+..... ......+......+..... .....+.++++|+++|+|. .|
T Consensus 155 -------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~ 216 (264)
T 3ibt_A 155 -------ETTDNADVLNHLRNEMP-----------WFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPL 216 (264)
T ss_dssp -------TTCCCHHHHHHHHHTGG-----------GSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSC
T ss_pred -------ccCCcHHHHHHHHHhhh-----------hccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCcc
Confidence 00011111111111100 0111112222222211111 1225678899999999764 44
Q ss_pred CCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 344 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
...+.+. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 217 ~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 261 (264)
T 3ibt_A 217 SQDYRQL-QLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIREF 261 (264)
T ss_dssp CHHHHHH-HHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHHHH
T ss_pred chhhHHH-HHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHH
Confidence 4444554 78888999999999999999999999999999999954
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.5e-26 Score=234.40 Aligned_cols=241 Identities=13% Similarity=0.082 Sum_probs=152.2
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC-CceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|.+ +++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.+++++
T Consensus 34 ~l~y~~~G~~-~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~- 111 (297)
T 2xt0_A 34 RMHYVDEGPR-DAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDA- 111 (297)
T ss_dssp CEEEEEESCT-TCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHH-
T ss_pred EEEEEEccCC-CCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-
Confidence 4567666642 1267899999999999999999999975 699999999999998 467899999999998
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh-h--hhhhhHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS-V--LQSTIPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
++.++++|+||||||.+|+.+|.++|++|+++|++++....... . ...........+.... ...+....
T Consensus 112 ---l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-- 183 (297)
T 2xt0_A 112 ---LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDV---GKLMQRAI-- 183 (297)
T ss_dssp ---HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCH---HHHHHHHS--
T ss_pred ---hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccch---hHHHhccC--
Confidence 44578999999999999999999999999999999985421110 0 0000000000000000 00000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHh--hcchhhhhhcCC--hhhHHHHHHHHHHhhhHhhhhcc-cCCccEEEEee
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVAL--SSYLPVLADILP--KETLLWKIELLKAASAYANSRLH-AVKAQMLVLCS 340 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~i~~PvLvi~G 340 (709)
... ............... ......+..... .....+. ......+.+. ++++|+|+|+|
T Consensus 184 ----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~i~~P~Lvi~G 246 (297)
T 2xt0_A 184 ----------PGI-TDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAE------IGRQAMSFWSTQWSGPTFMAVG 246 (297)
T ss_dssp ----------TTC-CHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHH------HHHHHHHHHHHTCCSCEEEEEE
T ss_pred ----------ccC-CHHHHHHHhccccCcchhHHHHHHHHhCccccccchhh------HHHHHHHHhhhccCCCeEEEEe
Confidence 000 000000000000000 000000000000 0000000 0011224567 89999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEE--EcCCCccccccChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRN--FYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~--i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|.+++ .. .+.+.+.+|++++++ ++++||++++ +|+++++.|.+|
T Consensus 247 ~~D~~~~-~~-~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~f 294 (297)
T 2xt0_A 247 AQDPVLG-PE-VMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALAA 294 (297)
T ss_dssp TTCSSSS-HH-HHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHHH
T ss_pred CCCcccC-hH-HHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHHH
Confidence 9999999 65 888999999987765 7899999999 999999999944
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=229.00 Aligned_cols=244 Identities=14% Similarity=0.149 Sum_probs=160.0
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
.++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++++
T Consensus 21 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l--- 93 (301)
T 3kda_A 21 KLHYVKGGQ----GPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQF--- 93 (301)
T ss_dssp EEEEEEEES----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHHHHHHHHHHHHHH---
T ss_pred EEEEEEcCC----CCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHHHHHHHHHHHHHc---
Confidence 345666664 77999999999999999999999987799999999999999 7799999999999984
Q ss_pred CCCCC-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh-----------HHHhhchhhhHH------
Q 005190 192 SPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-----------PLLELIPGQITT------ 253 (709)
Q Consensus 192 ~~~~~-v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~------ 253 (709)
+.++ ++|+||||||.+|+.+|.++|++|+++|++++............. .+....+.....
T Consensus 94 -~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (301)
T 3kda_A 94 -SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKE 172 (301)
T ss_dssp -CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHHHTTCH
T ss_pred -CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHHhccch
Confidence 3445 999999999999999999999999999999986543221110000 000000000000
Q ss_pred --hHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh------hhHhh
Q 005190 254 --MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA------SAYAN 325 (709)
Q Consensus 254 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 325 (709)
....++....... .....+......... ............+... .....
T Consensus 173 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (301)
T 3kda_A 173 RFFLEHFIKSHASNT----------EVFSERLLDLYARSY-------------AKPHSLNASFEYYRALNESVRQNAELA 229 (301)
T ss_dssp HHHHHHHHHHTCSSG----------GGSCHHHHHHHHHHH-------------TSHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCc----------ccCCHHHHHHHHHHh-------------ccccccchHHHHHHhhccchhhcccch
Confidence 0001111110000 000001111111100 0111111111111111 11112
Q ss_pred hhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhcccccccCCC
Q 005190 326 SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNH 398 (709)
Q Consensus 326 ~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~~~~ 398 (709)
..+.++++|+|+|+|++| ++... .+.+.+..+++++++++++||++++|+|+++++.|. .|+++++..
T Consensus 230 ~~l~~i~~P~l~i~G~~D--~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~~l~~~~~~ 297 (301)
T 3kda_A 230 KTRLQMPTMTLAGGGAGG--MGTFQ-LEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVI--DFLSRGRHH 297 (301)
T ss_dssp TSCBCSCEEEEEECSTTS--CTTHH-HHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHH--HHHTTSCCC
T ss_pred hhccccCcceEEEecCCC--CChhH-HHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHH--HHHhhCchh
Confidence 334589999999999999 66665 888999999999999999999999999999999999 667666543
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=222.56 Aligned_cols=222 Identities=16% Similarity=0.148 Sum_probs=150.4
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCC-cccHHHHHHHhcC-CceEEEEeCCCCCCC-------C---HHHHHHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGV-GLGLIRQHQRLGK-IFDIWCLHIPVKDRT-------S---FTGLVKLVESTVRS 187 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s-~~~~~~~~~~L~~-~~~Vi~~Dl~G~G~S-------s---~~~~~~dl~~~l~~ 187 (709)
++|...|+ +.++|||+||++++ ...|..+++.|.+ +|+|+++|+||||.| + +++.++|+.++++.
T Consensus 14 l~~~~~g~---~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (254)
T 2ocg_A 14 LHYQQTGE---GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKA 90 (254)
T ss_dssp EEEEEEEC---CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHHHHHHHHHHH
T ss_pred EEEEEecC---CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 45655564 34589999999988 6789999999965 599999999999998 3 55667777777766
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++......... ......... .......
T Consensus 91 ----l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~--------- 152 (254)
T 2ocg_A 91 ----LKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDS----MIYEGIRDV-SKWSERT--------- 152 (254)
T ss_dssp ----TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH----HHHHTTSCG-GGSCHHH---------
T ss_pred ----hCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhH----HHHHHHHHH-HHHHHHh---------
Confidence 4567899999999999999999999999999999988544322111 000000000 0000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-----hhHhhhhcccCCccEEEEeeCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-----SAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
... ...... ......... .....+... .......+.++++|+|+|+|++
T Consensus 153 ~~~---~~~~~~-~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 206 (254)
T 2ocg_A 153 RKP---LEALYG-YDYFARTCE----------------------KWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEK 206 (254)
T ss_dssp HHH---HHHHHC-HHHHHHHHH----------------------HHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETT
T ss_pred HHH---HHHHhc-chhhHHHHH----------------------HHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCC
Confidence 000 000000 000000000 000000000 0012345788999999999999
Q ss_pred CCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 343 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|.+++.+. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 207 D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 252 (254)
T 2ocg_A 207 DPLVPRFH-ADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDF 252 (254)
T ss_dssp CSSSCHHH-HHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred CccCCHHH-HHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHHHHH
Confidence 99999997 89999999999999999999999999999999999943
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=233.91 Aligned_cols=245 Identities=14% Similarity=0.120 Sum_probs=154.2
Q ss_pred ccccccCCCCCCC--CCEEEEeCCCCCCcccHHHHHHHhc--CCceEEEEeCCCCCCC-----------CHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRD--SPLLLFLPGIDGVGLGLIRQHQRLG--KIFDIWCLHIPVKDRT-----------SFTGLVKLVES 183 (709)
Q Consensus 119 ~~~~~~~g~p~~~--~p~Vv~lHG~~~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~ 183 (709)
.++|...|.+..+ +++|||+||++++...|..++..|. .+|+|+++|+||||.| +++++++|+.+
T Consensus 39 ~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~~~~a~dl~~ 118 (330)
T 3nwo_A 39 ETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHA 118 (330)
T ss_dssp EEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCHHHHHHHHHH
T ss_pred EEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccHHHHHHHHHH
Confidence 3456666652223 3379999999999999998888886 5899999999999998 34778999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHh-hhhh
Q 005190 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST-LSLM 262 (709)
Q Consensus 184 ~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 262 (709)
++++ ++.++++|+||||||.+|+.+|.++|++|.++|++++........ .....+...++......+... ....
T Consensus 119 ll~~----lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (330)
T 3nwo_A 119 VCTA----LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWS-EAAGDLRAQLPAETRAALDRHEAAGT 193 (330)
T ss_dssp HHHH----HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHH-HHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHH----cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHH-HHHHHHHHhcCHHHHHHHHHHHhccC
Confidence 9988 445789999999999999999999999999999998865421100 000011111111110000000 0000
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHH------HHH-------------hhhH
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIEL------LKA-------------ASAY 323 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------------~~~~ 323 (709)
...+... .....++..... . ....+.........+ ... ....
T Consensus 194 ~~~~~~~------------~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (330)
T 3nwo_A 194 ITHPDYL------------QAAAEFYRRHVC---R----VVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWS 254 (330)
T ss_dssp TTSHHHH------------HHHHHHHHHHTC---C----SSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCB
T ss_pred CCCHHHH------------HHHHHHHHHhhc---c----ccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCc
Confidence 0000000 000000000000 0 000000000000000 000 0011
Q ss_pred hhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 324 ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 324 ~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
..+.+.+|++|+|+|+|++|.+++. . .+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 255 ~~~~l~~i~~P~Lvi~G~~D~~~p~-~-~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~~F 318 (330)
T 3nwo_A 255 VIDRLPDVTAPVLVIAGEHDEATPK-T-WQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQF 318 (330)
T ss_dssp CGGGGGGCCSCEEEEEETTCSSCHH-H-HHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred hhhhcccCCCCeEEEeeCCCccChH-H-HHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHHHH
Confidence 2356788999999999999998764 4 78899999999999999999999999999999999943
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=226.60 Aligned_cols=246 Identities=12% Similarity=0.084 Sum_probs=161.3
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~ 189 (709)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 14 ~~~y~~~g~----~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-- 87 (278)
T 3oos_A 14 KFEYFLKGE----GPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREA-- 87 (278)
T ss_dssp EEEEEEECS----SSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHHHHHHHHHHHH--
T ss_pred eEEEEecCC----CCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHHHHHHHHHHHH--
Confidence 355666664 67899999999999999999999988999999999999998 568889999999888
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh-
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK- 268 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 268 (709)
.+.++++|+||||||.+++.+|.++|++++++|++++............ ...............+..+......
T Consensus 88 --l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (278)
T 3oos_A 88 --LYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDS---IYCSKNVKFNRIVSIMNALNDDSTVQ 162 (278)
T ss_dssp --TTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTS---TTSTTSTTHHHHHHHHHHHTCTTSCH
T ss_pred --hCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccch---hhhhhchhHHHHHHHHHhhcccccCc
Confidence 4567899999999999999999999999999999999766211110000 0000000000111111111100000
Q ss_pred ---hH-HHHH-hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH---HhhhHhhhhcccCCccEEEEee
Q 005190 269 ---MA-MDNV-AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK---AASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 269 ---~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~PvLvi~G 340 (709)
.. .... .......+...... ...............+. .........+.++++|+|+|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 229 (278)
T 3oos_A 163 EERKALSREWALMSFYSEEKLEEAL-------------KLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCG 229 (278)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHT-------------TSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEE
T ss_pred hHHHHHHHHHhhcccCCcHHHHHHh-------------hccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEe
Confidence 00 0000 00000000000000 00001111111111111 0112233567889999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|.+++++. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 230 ~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 277 (278)
T 3oos_A 230 KHDVQCPYIF-SCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDT 277 (278)
T ss_dssp TTCSSSCHHH-HHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHHT
T ss_pred ccCCCCCHHH-HHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHhh
Confidence 9999999997 99999999999999999999999999999999999854
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=224.41 Aligned_cols=240 Identities=15% Similarity=0.084 Sum_probs=159.6
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHHhh
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~~~ 189 (709)
.|...|+ +.|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 20 ~~~~~g~---~~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-- 94 (282)
T 3qvm_A 20 NINITGG---GEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVA-- 94 (282)
T ss_dssp TCEEEEC---SSCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHH--
T ss_pred ceeecCC---CCCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHH--
Confidence 3445554 458999999999999999999999988999999999999998 457788888888887
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh----HHHhhchhhhHHhHHHhhhhhcCc
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI----PLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
.+.++++|+||||||.+|+.+|.++|+.++++|+++|............. ................+..
T Consensus 95 --~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 167 (282)
T 3qvm_A 95 --LDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWAN----- 167 (282)
T ss_dssp --TTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHH-----
T ss_pred --cCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHH-----
Confidence 45679999999999999999999999999999999986654332100000 0000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
..................+...... ............. ........+.++++|+|+++|++|.+
T Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~ 231 (282)
T 3qvm_A 168 ---YLAPLVMGASHSSELIGELSGSFCT-----------TDPIVAKTFAKAT--FFSDYRSLLEDISTPALIFQSAKDSL 231 (282)
T ss_dssp ---HHHHHHHCTTSCHHHHHHHHHHHHH-----------SCHHHHHHHHHHH--HSCBCGGGGGGCCSCEEEEEEEECTT
T ss_pred ---HHHhhccCCccchhhHHHHHHHHhc-----------CCcHHHHHHHHHH--hcccHHHHHhcCCCCeEEEEeCCCCc
Confidence 0000000001111111111111111 1111111111111 11222356788999999999999999
Q ss_pred CCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+. .+.+.+.++++++++++++||++++++|+++++.|.+|
T Consensus 232 ~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 274 (282)
T 3qvm_A 232 ASPEV-GQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLIHF 274 (282)
T ss_dssp CCHHH-HHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHHHHH
Confidence 99997 99999999999999999999999999999999999954
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=225.04 Aligned_cols=240 Identities=13% Similarity=0.102 Sum_probs=146.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCC-CCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSP-KRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~-~~~v~Lv 200 (709)
++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.+++++ ++ .++++|+
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~~lv 84 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMAS----IPPDEKVVLL 84 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHH----SCTTCCEEEE
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHH----hCCCCCeEEE
Confidence 57789999999999999999999995 7899999999999998 578899999999988 43 4789999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhh-hhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-TIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
||||||.+++.+|.++|++|+++|++++........... ...+........ ...... .......... .....
T Consensus 85 GhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~----~~~~~ 157 (264)
T 2wfl_A 85 GHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADM--MLDSQF-STYGNPENPG----MSMIL 157 (264)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTT--TTTCEE-EEESCTTSCE----EEEEC
T ss_pred EeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchh--hhhhhh-hhccCCCCCc----chhhh
Confidence 999999999999999999999999998743211111000 001111000000 000000 0000000000 00000
Q ss_pred CchHHHHH-HHh-HHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005190 280 LQPTIQDL-SQD-LVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357 (709)
Q Consensus 280 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~ 357 (709)
........ +.. ........... ....... ... +......... ...++|+|+|+|++|.+++.+. .+.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~-~~~~~~~~~~--~~~~~P~l~i~G~~D~~~~~~~-~~~~~~ 229 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKML---TRPGSLF-FQD-LAKAKKFSTE--RYGSVKRAYIFCNEDKSFPVEF-QKWFVE 229 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHH---CCCEECC-HHH-HTTSCCCCTT--TGGGSCEEEEEETTCSSSCHHH-HHHHHH
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhc---cCCCccc-ccc-cccccccChH--HhCCCCeEEEEeCCcCCCCHHH-HHHHHH
Confidence 00000000 000 00000000000 0000000 000 0000000001 1136899999999999999996 889999
Q ss_pred hcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 358 ALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 358 ~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+|++++++++++||++++|+|+++++.|.++
T Consensus 230 ~~p~~~~~~i~~~gH~~~~e~P~~~~~~l~~f 261 (264)
T 2wfl_A 230 SVGADKVKEIKEADHMGMLSQPREVCKCLLDI 261 (264)
T ss_dssp HHCCSEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred hCCCceEEEeCCCCCchhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999953
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-25 Score=226.93 Aligned_cols=239 Identities=13% Similarity=0.148 Sum_probs=155.2
Q ss_pred ccccccCCCCCCCCCEEEEeCCCC---CCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|+ +++|||+||++ ++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.
T Consensus 27 ~l~y~~~g~----g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~dl~~~l~~- 101 (296)
T 1j1i_A 27 ETRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKA- 101 (296)
T ss_dssp EEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH-
T ss_pred EEEEEecCC----CCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHh-
Confidence 355666665 57899999998 667788889999988899999999999987 568889999999987
Q ss_pred hccCCC-CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 189 SNRSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 189 ~~~~~~-~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+. ++++|+||||||.+|+.+|.++|++++++|++++....... ...........+. .......+.....+.
T Consensus 102 ---l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 174 (296)
T 1j1i_A 102 ---MNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI-HEDLRPIINYDFT--REGMVHLVKALTNDG- 174 (296)
T ss_dssp ---SCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCSC--HHHHHHHHHHHSCTT-
T ss_pred ---cCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCC-CchHHHHhcccCC--chHHHHHHHHhccCc-
Confidence 444 78999999999999999999999999999999986532111 1000001100000 000001111110000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh--hhHhhhhcccCCccEEEEeeCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA--SAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
...........+..... .. ....+.......... .......+.++++|+|+|+|++|.+
T Consensus 175 ---------~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~ 235 (296)
T 1j1i_A 175 ---------FKIDDAMINSRYTYATD-----EA-----TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKV 235 (296)
T ss_dssp ---------CCCCHHHHHHHHHHHHS-----HH-----HHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSS
T ss_pred ---------ccccHHHHHHHHHHhhC-----cc-----hhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcc
Confidence 00000111111100000 00 000011111111000 0012245678999999999999999
Q ss_pred CCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+. ++.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 236 ~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 278 (296)
T 1j1i_A 236 VPVET-AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSF 278 (296)
T ss_dssp SCHHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHH
T ss_pred cCHHH-HHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHHHH
Confidence 99997 88999999999999999999999999999999999943
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-24 Score=215.18 Aligned_cols=215 Identities=15% Similarity=0.124 Sum_probs=145.4
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++.+... +.++++|+|||
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence 5689999999999999999999995 6899999999999987 5677777877766655433 35689999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
|||.+|+.+|.++| |+++|+++++....... . .... .......... . .... ...
T Consensus 95 mGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~--~---~~~~----~~~~~~~~~~-~-------------~~~~-~~~ 148 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEE--T---MYEG----VLEYAREYKK-R-------------EGKS-EEQ 148 (247)
T ss_dssp HHHHHHHHHHTTSC--CSCEEEESCCSSCCCHH--H---HHHH----HHHHHHHHHH-H-------------HTCC-HHH
T ss_pred HHHHHHHHHHHhCC--CCeEEEEcceeecCcch--h---hhHH----HHHHHHHhhc-c-------------cccc-hHH
Confidence 99999999999999 99999876643321100 0 0000 0000000000 0 0000 001
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC--
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-- 361 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~-- 361 (709)
........ .. .....+.....+ .....+.+.++++|+|+|+|++|.++|++. ++.+++.+++
T Consensus 149 ~~~~~~~~----------~~-~~~~~~~~~~~~----~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~-~~~~~~~~~~~~ 212 (247)
T 1tqh_A 149 IEQEMEKF----------KQ-TPMKTLKALQEL----IADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPV 212 (247)
T ss_dssp HHHHHHHH----------TT-SCCTTHHHHHHH----HHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHCCCSS
T ss_pred HHhhhhcc----------cC-CCHHHHHHHHHH----HHHHHhhcccCCCCEEEEecCCCCCCCcch-HHHHHHhcCCCc
Confidence 11111000 00 011111111111 122345678899999999999999999997 8999999886
Q ss_pred cEEEEEcCCCccccccC-hhhHHHHHhhc
Q 005190 362 CEPRNFYGHGHFLLLED-GVDLVTIIKGA 389 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~-p~~~~~~I~~~ 389 (709)
+++++++++||++++|+ |+++++.|.+|
T Consensus 213 ~~~~~~~~~gH~~~~e~~~~~~~~~i~~F 241 (247)
T 1tqh_A 213 KQIKWYEQSGHVITLDQEKDQLHEDIYAF 241 (247)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHHHH
T ss_pred eEEEEeCCCceeeccCccHHHHHHHHHHH
Confidence 69999999999999985 79999999943
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-25 Score=222.80 Aligned_cols=233 Identities=13% Similarity=0.064 Sum_probs=146.1
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
+++|||+||++.+...|..+++.|+ .+|+|+++|+||||.| +++++++|+.++++++. ..++++||||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP---PGEKVILVGE 79 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSC---TTCCEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhcc---ccCCeEEEEE
Confidence 5689999999999999999999995 6899999999999998 57899999999998731 2468999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhh-hhHHHhhchhhhHHhHHHhhh-------hhcCchhhhHHHHH
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-TIPLLELIPGQITTMLSSTLS-------LMTGDPLKMAMDNV 274 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 274 (709)
||||.+++.+|.++|++|+++|++++........... ........+..... ....+. ........ ....
T Consensus 80 SmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~ 156 (257)
T 3c6x_A 80 SCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDT-TYFTYTKDGKEITGLKLGFTL--LREN 156 (257)
T ss_dssp ETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTC-EEEEEEETTEEEEEEECCHHH--HHHH
T ss_pred CcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhh-hhhhccCCCCccccccccHHH--HHHH
Confidence 9999999999999999999999998753211111000 00111101100000 000000 00000000 0000
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~ 354 (709)
.......... .... ... .+...... . +..........+ .++|+|+|+|++|.++|++. ++.
T Consensus 157 ~~~~~~~~~~-~~~~----------~~~--~~~~~~~~--~-~~~~~~~~~~~~--~~~P~l~i~G~~D~~~p~~~-~~~ 217 (257)
T 3c6x_A 157 LYTLCGPEEY-ELAK----------MLT--RKGSLFQN--I-LAKRPFFTKEGY--GSIKKIYVWTDQDEIFLPEF-QLW 217 (257)
T ss_dssp TSTTSCHHHH-HHHH----------HHC--CCBCCCHH--H-HHHSCCCCTTTG--GGSCEEEEECTTCSSSCHHH-HHH
T ss_pred HhcCCCHHHH-HHHH----------Hhc--CCCccchh--h-hccccccChhhc--CcccEEEEEeCCCcccCHHH-HHH
Confidence 0000000000 0000 000 00000000 0 000000000111 26899999999999999997 899
Q ss_pred HHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 355 LSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 355 l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++.+|++++++++++||++++|+|+++++.|.++
T Consensus 218 ~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~~f 252 (257)
T 3c6x_A 218 QIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEV 252 (257)
T ss_dssp HHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHCCCCeEEEeCCCCCCcccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999954
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=230.98 Aligned_cols=246 Identities=13% Similarity=0.063 Sum_probs=158.9
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHH-hcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR-LGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~-L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|...|+ +|+|||+||++++...|..+++. +.++|+|+++|+||||.| +++++++|+.++++++
T Consensus 20 ~l~~~~~g~----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~-- 93 (309)
T 3u1t_A 20 TIAYVDEGS----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDGFIDAL-- 93 (309)
T ss_dssp EEEEEEEEC----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHH--
T ss_pred EEEEEEcCC----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHHHHHHHHHc--
Confidence 345666665 67899999999999999999999 589999999999999999 6799999999999884
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchh--hhhhhh----HHHhhchhhhHHhHHHhhhhhcC
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS--VLQSTI----PLLELIPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 264 (709)
+.++++|+||||||.+|+.+|..+|++|+++|++++....... .+.... ..+....... ....... ...
T Consensus 94 --~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~ 168 (309)
T 3u1t_A 94 --GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTAD--VGEKMVL-DGN 168 (309)
T ss_dssp --TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTT--HHHHHHT-TTC
T ss_pred --CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccc--hhhhhcc-ccc
Confidence 4578999999999999999999999999999999976543210 000000 0111100000 0000000 000
Q ss_pred chhhhHHHHH-hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHH------------HHHhhhHhhhhcccC
Q 005190 265 DPLKMAMDNV-AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIEL------------LKAASAYANSRLHAV 331 (709)
Q Consensus 265 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~i 331 (709)
.......... ................ ............. ...........+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 235 (309)
T 3u1t_A 169 FFVETILPEMGVVRSLSEAEMAAYRAP-------------FPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMAS 235 (309)
T ss_dssp HHHHTHHHHTSCSSCCCHHHHHHHHTT-------------CCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred eehhhhcccccccccCCHHHHHHHHHh-------------cCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccC
Confidence 0000000000 0000000000000000 0000000000000 001111233456789
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|+|+|+|++|.+++.+. .+.+.+.+++.++++++++||++++++|+++++.|.+|
T Consensus 236 ~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 292 (309)
T 3u1t_A 236 PIPKLLFHAEPGALAPKPV-VDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIADW 292 (309)
T ss_dssp CSCEEEEEEEECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHH-HHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHHHH
Confidence 9999999999999999997 88999999999999999999999999999999999954
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=222.82 Aligned_cols=233 Identities=14% Similarity=0.137 Sum_probs=146.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCC-CCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSP-KRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~-~~~v~Lv 200 (709)
++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++. .+ .++++||
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~~lv 78 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMES----LSADEKVILV 78 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHT----SCSSSCEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHH----hccCCCEEEE
Confidence 46789999999999999999999995 6899999999999998 568899999999987 43 4689999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhh-hhHHHhhchhhhHHhHHHhhhhhcCch--------hhhH-
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-TIPLLELIPGQITTMLSSTLSLMTGDP--------LKMA- 270 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~- 270 (709)
||||||.+++.+|.++|++|+++|++++........... ...+....+... ...... ...... ....
T Consensus 79 GhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 155 (273)
T 1xkl_A 79 GHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAEN--WLDTQF-LPYGSPEEPLTSMFFGPKF 155 (273)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTT--TTTCEE-EECSCTTSCCEEEECCHHH
T ss_pred ecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhh--HHHHHH-hhccCCCCCccccccCHHH
Confidence 999999999999999999999999999753221111000 001111110000 000000 000000 0000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
.............. .... .... +..... .. +..... . ......++|+|+|+|++|.+++++.
T Consensus 156 ~~~~~~~~~~~~~~-~~~~----------~~~~--~~~~~~--~~-~~~~~~-~-~~~~~~~~P~l~i~G~~D~~~p~~~ 217 (273)
T 1xkl_A 156 LAHKLYQLCSPEDL-ALAS----------SLVR--PSSLFM--ED-LSKAKY-F-TDERFGSVKRVYIVCTEDKGIPEEF 217 (273)
T ss_dssp HHHHTSTTSCHHHH-HHHH----------HHCC--CBCCCH--HH-HHHCCC-C-CTTTGGGSCEEEEEETTCTTTTHHH
T ss_pred HHHHhhccCCHHHH-HHHH----------HhcC--CCchhh--hh-hhcccc-c-chhhhCCCCeEEEEeCCccCCCHHH
Confidence 00000000000000 0000 0000 000000 00 000000 0 0001136899999999999999996
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+++.+|++++++++++||++++|+|+++++.|.++
T Consensus 218 -~~~~~~~~p~~~~~~i~~aGH~~~~e~P~~~~~~i~~f 255 (273)
T 1xkl_A 218 -QRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEI 255 (273)
T ss_dssp -HHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred -HHHHHHhCCCCeEEEeCCCCCCchhcCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999943
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=222.65 Aligned_cols=247 Identities=13% Similarity=0.073 Sum_probs=149.9
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------------CHHHHHHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVRS 187 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------------s~~~~~~dl~~~l~~ 187 (709)
++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++|+.+++++
T Consensus 25 l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (306)
T 3r40_A 25 IFARVGGD----GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQ 100 (306)
T ss_dssp EEEEEEEC----SSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHH
T ss_pred EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHH
Confidence 44555564 67899999999999999999999988999999999999988 367888999999887
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhH-HhHHHhhhhhc-Cc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQIT-TMLSSTLSLMT-GD 265 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~ 265 (709)
.+.++++|+||||||.+|+.+|.++|++++++|++++............ ........... ........... ..
T Consensus 101 ----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (306)
T 3r40_A 101 ----LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNR-AYALKIYHWSFLAQPAPLPENLLGGD 175 (306)
T ss_dssp ----TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSH-HHHHHSTHHHHHTSCTTHHHHHHTSC
T ss_pred ----hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhh-hhhhhhHHHHHhhcccchHHHHHcCC
Confidence 4567899999999999999999999999999999998443221111000 00000000000 00000000000 00
Q ss_pred hhhhHHHHHhh-------ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh-------hHhhhhcccC
Q 005190 266 PLKMAMDNVAK-------RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS-------AYANSRLHAV 331 (709)
Q Consensus 266 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i 331 (709)
........... .....+..+...... ................. ......+.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (306)
T 3r40_A 176 PDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAF-------------ADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKI 242 (306)
T ss_dssp HHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHH-------------TSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHhhcccCCCccccCCHHHHHHHHHHH-------------ccCCCcchhhHHHHhcccccchhhhhhhhhccCC
Confidence 00000000000 000011111111100 00011111111111100 0111256889
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|+|+|+|++|.+++.....+.+.+..++++++++ ++||++++|+|+++++.|.+|
T Consensus 243 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~f 299 (306)
T 3r40_A 243 PVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALVRF 299 (306)
T ss_dssp CSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHHHH
T ss_pred CcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHHHH
Confidence 999999999999999943337788888999999999 789999999999999999944
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=222.85 Aligned_cols=245 Identities=16% Similarity=0.166 Sum_probs=150.0
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~ 189 (709)
.++|...|.+ +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++++
T Consensus 17 ~l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l- 94 (285)
T 3bwx_A 17 RLHFRAYEGD-ISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQE- 94 (285)
T ss_dssp EEEEEEECBC-TTSCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHH-
T ss_pred eEEEEEcCCC-CCCCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhc-
Confidence 3556666652 1267899999999999999999999988999999999999998 4578899999999883
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchh--hhHHhHHHhhhhhcCchh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG--QITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 267 (709)
+.++++|+||||||.+|+.+|.++|++|+++|++++..................... ....... .+.......
T Consensus 95 ---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 169 (285)
T 3bwx_A 95 ---GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAAR-ALQESSGDV- 169 (285)
T ss_dssp ---TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHHH-HHHHHHTTT-
T ss_pred ---CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHHH-HHHHhhhhc-
Confidence 457899999999999999999999999999999876433222111111000000000 0000000 000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHh--h-----cchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccC-CccEEEEe
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVAL--S-----SYLPVLADILPKETLLWKIELLKAASAYANSRLHAV-KAQMLVLC 339 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLvi~ 339 (709)
..... .............. . .....+...+.... ...........+.++ ++|+|+|+
T Consensus 170 -------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~P~lii~ 234 (285)
T 3bwx_A 170 -------YPDWD-ITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPV-------GATPQVDMWPLFDALATRPLLVLR 234 (285)
T ss_dssp -------STTCC-HHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCT-------TCCCSSCCHHHHHHHTTSCEEEEE
T ss_pred -------ccccC-hHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhh-------hccccchhhHHHHHccCCCeEEEE
Confidence 00000 00000000000000 0 00000000000000 000000001122334 79999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
|++|.+++++. .+.+++. +++++++++++||++++|+|+.+. .|.+
T Consensus 235 G~~D~~~~~~~-~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~-~i~~ 280 (285)
T 3bwx_A 235 GETSDILSAQT-AAKMASR-PGVELVTLPRIGHAPTLDEPESIA-AIGR 280 (285)
T ss_dssp ETTCSSSCHHH-HHHHHTS-TTEEEEEETTCCSCCCSCSHHHHH-HHHH
T ss_pred eCCCCccCHHH-HHHHHhC-CCcEEEEeCCCCccchhhCchHHH-HHHH
Confidence 99999999996 8899999 999999999999999999999874 6763
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=222.27 Aligned_cols=253 Identities=19% Similarity=0.170 Sum_probs=168.4
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVES 183 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~ 183 (709)
+|....+..|...+. +.|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.+
T Consensus 26 ~g~~l~~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 102 (303)
T 3pe6_A 26 DGQYLFCRYWAPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQ 102 (303)
T ss_dssp TSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHHHHHHHH
T ss_pred CCeEEEEEEeccCCC---CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 444443333333332 47889999999999999999999996 5899999999999998 56889999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhc
Q 005190 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (709)
Q Consensus 184 ~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (709)
+++.+....+..+++|+|||+||.+|+.+|..+|+.++++|+++|.................. ..........
T Consensus 103 ~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 175 (303)
T 3pe6_A 103 HVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAK-------VLNSVLPNLS 175 (303)
T ss_dssp HHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHH-------HHHTTCCSCC
T ss_pred HHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHH-------HHHHhccccc
Confidence 999988877778999999999999999999999999999999999765433221111111000 0000100000
Q ss_pred CchhhhHHHHHhhccCCc-hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 264 GDPLKMAMDNVAKRLSLQ-PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
..... ....... ........+. ..........+...... ........+.++++|+|+++|++
T Consensus 176 ~~~~~------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~ 238 (303)
T 3pe6_A 176 SGPID------SSVLSRNKTEVDIYNSDP----------LICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSA 238 (303)
T ss_dssp CCCCC------GGGTCSCHHHHHHHHTCT----------TSCCSCCCHHHHHHHHH-HHHHHHHHGGGCCSCEEEEEETT
T ss_pred CCccc------hhhhhcchhHHHHhccCc----------cccccchhhhhHHHHHH-HHHHHHHHhhcCCCCEEEEeeCC
Confidence 00000 0000000 0111111000 00011111222222221 11223356788999999999999
Q ss_pred CCCCCcHHHHHHHHhhcC--CcEEEEEcCCCccccccChhhHHHHHhhc-cccc
Q 005190 343 DQLMPSQEEGERLSSALH--KCEPRNFYGHGHFLLLEDGVDLVTIIKGA-SYYR 393 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~--~~~~~~i~~aGH~~~le~p~~~~~~I~~~-~f~~ 393 (709)
|.+++.+. .+.+.+.++ ++++++++++||++++++|+.+.+.+.+. .|+.
T Consensus 239 D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~ 291 (303)
T 3pe6_A 239 DRLCDSKG-AYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVS 291 (303)
T ss_dssp CSSBCHHH-HHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCCChHH-HHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHh
Confidence 99999996 999999888 78999999999999999999888887755 4443
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=224.86 Aligned_cols=245 Identities=15% Similarity=0.090 Sum_probs=159.0
Q ss_pred ccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005190 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~ 191 (709)
.|...+...+++|+|||+||++++...|..+++.|. +||+|+++|+||||.| +++++++++.++++.
T Consensus 35 ~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~---- 110 (315)
T 4f0j_A 35 AYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLER---- 110 (315)
T ss_dssp EEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHH----
T ss_pred EEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHH----
Confidence 344333323467899999999999999999999996 5799999999999988 678999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhh----hhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ----STIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+|||+||.+|+.+|.++|+.++++|+++|.......... ....+.....................
T Consensus 111 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 187 (315)
T 4f0j_A 111 LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYY--- 187 (315)
T ss_dssp TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTS---
T ss_pred hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHh---
Confidence 45678999999999999999999999999999999985433221110 00011110000000000000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH--HhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK--AASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
..... ............ ...........+...... .........+.++++|+|+++|++|.+
T Consensus 188 --------~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~ 251 (315)
T 4f0j_A 188 --------AGEWR-PEFDRWVQMQAG-------MYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNT 251 (315)
T ss_dssp --------TTCCC-GGGHHHHHHHHH-------HTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCC
T ss_pred --------ccccC-CchHHHHHHHHH-------HhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCc
Confidence 00000 000111110000 000011111111111111 111223356788999999999999999
Q ss_pred CC----------------cHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MP----------------SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~----------------~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++ .+. .+.+.+..+++++++++++||++++++|+++++.|.+|
T Consensus 252 ~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 310 (315)
T 4f0j_A 252 AIGKDAAPAELKARLGNYAQL-GKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEG 310 (315)
T ss_dssp CTTGGGSCHHHHTTSCCHHHH-HHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred Cccccccccccccccccchhh-hhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHHHH
Confidence 99 665 88899999999999999999999999999999999943
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=219.80 Aligned_cols=231 Identities=13% Similarity=0.052 Sum_probs=149.2
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCC-CCEEEEE
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPK-RPVYLVG 201 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~-~~v~LvG 201 (709)
+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++++ +. ++++|+|
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~lvG 79 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSL----PENEEVILVG 79 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTS----CTTCCEEEEE
T ss_pred CCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHh----cccCceEEEE
Confidence 5789999999999999999999996 5799999999999998 6788899999998873 33 7899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh-chhhhHHhHHHhhhhhcCc-------hh-hhHHH
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL-IPGQITTMLSSTLSLMTGD-------PL-KMAMD 272 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~-~~~~~ 272 (709)
|||||.+|+.+|.++|++++++|++++.................. ...... ..+....+. .. .....
T Consensus 80 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 155 (258)
T 3dqz_A 80 FSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGD----CEFSSHETRNGTMSLLKMGPKFMK 155 (258)
T ss_dssp ETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTT----CEEEEEEETTEEEEEEECCHHHHH
T ss_pred eChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhh----cccchhhhhccChhhhhhhHHHHH
Confidence 999999999999999999999999998654332222111111110 000000 000000000 00 00000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
................ . ....... ....+.. ..........++|+++|+|++|.+++++. .
T Consensus 156 ~~~~~~~~~~~~~~~~----~----------~~~~~~~--~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~ 216 (258)
T 3dqz_A 156 ARLYQNCPIEDYELAK----M----------LHRQGSF--FTEDLSK--KEKFSEEGYGSVQRVYVMSSEDKAIPCDF-I 216 (258)
T ss_dssp HHTSTTSCHHHHHHHH----H----------HCCCEEC--CHHHHHT--SCCCCTTTGGGSCEEEEEETTCSSSCHHH-H
T ss_pred HHhhccCCHHHHHHHH----H----------hccCCch--hhhhhhc--cccccccccccCCEEEEECCCCeeeCHHH-H
Confidence 0000000000000000 0 0000000 0000000 00011122237999999999999999997 9
Q ss_pred HHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 353 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 353 ~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 217 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 253 (258)
T 3dqz_A 217 RWMIDNFNVSKVYEIDGGDHMVMLSKPQKLFDSLSAI 253 (258)
T ss_dssp HHHHHHSCCSCEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHHhCCcccEEEcCCCCCchhhcChHHHHHHHHHH
Confidence 9999999999999999999999999999999999954
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=214.39 Aligned_cols=231 Identities=14% Similarity=0.141 Sum_probs=156.8
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhc--c
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESN--R 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~--~ 191 (709)
+.|...|+ .+++|+|||+||++++...|. ++..|.++|+|+++|+||||.| +++++++|+.++++.... .
T Consensus 5 l~y~~~g~-~~~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (245)
T 3e0x_A 5 LHYVHVGN-KKSPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVTKH 82 (245)
T ss_dssp CCEEEEEC-TTCSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHCTTTTT
T ss_pred eEEEecCC-CCCCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHhhhhHhh
Confidence 44555554 235789999999999999999 8888989999999999999998 789999999999922111 1
Q ss_pred CCCCCEEEEEechhHHHHHHHHHh-CCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhH
Q 005190 192 SPKRPVYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~-~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (709)
.+ +++|+|||+||.+|+.+|.+ +|+ ++++|+++|..............+.......... ..
T Consensus 83 ~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------- 144 (245)
T 3e0x_A 83 QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYL--LE------------- 144 (245)
T ss_dssp CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHH--HH-------------
T ss_pred cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcC--cc-------------
Confidence 33 89999999999999999999 999 9999999997654221111111111110000000 00
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
................ +. ............. ........+.++++|+++++|++|.+++.+.
T Consensus 145 ----~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 206 (245)
T 3e0x_A 145 ----CIGGIDNPLSEKYFET----------LE--KDPDIMINDLIAC--KLIDLVDNLKNIDIPVKAIVAKDELLTLVEY 206 (245)
T ss_dssp ----HHTCSCSHHHHHHHTT----------SC--SSHHHHHHHHHHH--HHCBCGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred ----cccccchHHHHHHHHH----------Hh--cCcHHHHHHHHHh--ccccHHHHHHhCCCCEEEEEeCCCCCCCHHH
Confidence 0000000111111000 00 0111111111111 1122345678899999999999999999997
Q ss_pred HHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+.+.+.++++++++++++||++++++|+++++.|.+|
T Consensus 207 -~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 244 (245)
T 3e0x_A 207 -SEIIKKEVENSELKIFETGKHFLLVVNAKGVAEEIKNF 244 (245)
T ss_dssp -HHHHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHHHTT
T ss_pred -HHHHHHHcCCceEEEeCCCCcceEEecHHHHHHHHHhh
Confidence 99999999999999999999999999999999999854
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=217.83 Aligned_cols=235 Identities=13% Similarity=0.154 Sum_probs=156.3
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccC
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~ 192 (709)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++ .
T Consensus 14 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~----l 85 (262)
T 3r0v_A 14 PIAFERSGS----GPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVEREIEDLAAIIDA----A 85 (262)
T ss_dssp EEEEEEEEC----SSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCCSSCCHHHHHHHHHHHHHH----T
T ss_pred EEEEEEcCC----CCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCCCCCCHHHHHHHHHHHHHh----c
Confidence 344555564 67899999999999999999999999999999999999999 689999999999988 4
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhh-----hHHhHHHhhhhhcCchh
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ-----ITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 267 (709)
+ ++++|+||||||.+|+.+|.++| +++++|+++|..............+...+... .......+......
T Consensus 86 ~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 160 (262)
T 3r0v_A 86 G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVG--- 160 (262)
T ss_dssp T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSC---
T ss_pred C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHHHHHhhcccC---
Confidence 4 78999999999999999999999 99999999986654332211101111110000 00011111111000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 347 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~ 347 (709)
...+..+.+...... ..... ....+.+...... ........+.++++|+|+|+|++|.+++
T Consensus 161 -----------~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~~~ 221 (262)
T 3r0v_A 161 -----------VPPDLVAQMQQAPMW-----PGMEA--VAHTLPYDHAVMG-DNTIPTARFASISIPTLVMDGGASPAWI 221 (262)
T ss_dssp -----------CCHHHHHHHHTSTTH-----HHHHH--TGGGHHHHHHHHT-TSCCCHHHHTTCCSCEEEEECTTCCHHH
T ss_pred -----------CCHHHHHHHHhhhcc-----cchHH--HHhhhhhhhhhhh-cCCCCHHHcCcCCCCEEEEeecCCCCCC
Confidence 001111111100000 00000 0000110000000 0111235678899999999999999999
Q ss_pred cHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 348 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++. .+.+.+.++++++++++++|| +++|+++++.|.+|
T Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~~f 259 (262)
T 3r0v_A 222 RHT-AQELADTIPNARYVTLENQTH---TVAPDAIAPVLVEF 259 (262)
T ss_dssp HHH-HHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHHHHH
T ss_pred HHH-HHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHHHHH
Confidence 996 999999999999999999999 47999999999954
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=221.65 Aligned_cols=242 Identities=13% Similarity=0.028 Sum_probs=156.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCccc-HHH-----HHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLG-LIR-----QHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLV 181 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~-~~~-----~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl 181 (709)
.++|.+.|++++++|+|||+||++++... |.. +++.|+++|+|+++|+||||.| +++++++|+
T Consensus 22 ~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l 101 (286)
T 2qmq_A 22 SVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMI 101 (286)
T ss_dssp EEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHTH
T ss_pred EEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHHH
Confidence 55677777644467899999999999875 665 7888988899999999999875 468888999
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhh
Q 005190 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261 (709)
Q Consensus 182 ~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (709)
.++++++ +.++++|+||||||.+|+.+|..+|++++++|++++........ .............. .......
T Consensus 102 ~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~ 173 (286)
T 2qmq_A 102 PCILQYL----NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM-DWAAHKLTGLTSSI---PDMILGH 173 (286)
T ss_dssp HHHHHHH----TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH-HHHHHHHHHTTSCH---HHHHHHH
T ss_pred HHHHHHh----CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh-hhhhhhhccccccc---hHHHHHH
Confidence 9999884 44689999999999999999999999999999999865432111 00000000000000 0001000
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhH--hhhhcccCCccEEEEe
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAY--ANSRLHAVKAQMLVLC 339 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~i~~PvLvi~ 339 (709)
...... . .......+.+.... ...............+...... ....+.++++|+|+|+
T Consensus 174 ~~~~~~------~---~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 234 (286)
T 2qmq_A 174 LFSQEE------L---SGNSELIQKYRGII----------QHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVV 234 (286)
T ss_dssp HSCHHH------H---HTTCHHHHHHHHHH----------HTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEE
T ss_pred HhcCCC------C---CcchHHHHHHHHHH----------HhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEe
Confidence 000000 0 00001111111110 0011111122222222111111 1245678999999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 340 SGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|++|.+++ .. .+.+.+..+ ++++++++++||++++|+|+++++.|.+|
T Consensus 235 G~~D~~~~-~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 283 (286)
T 2qmq_A 235 GDQAPHED-AV-VECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYF 283 (286)
T ss_dssp ETTSTTHH-HH-HHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHH
T ss_pred cCCCcccc-HH-HHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHH
Confidence 99999998 43 677777777 89999999999999999999999999954
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-25 Score=222.25 Aligned_cols=236 Identities=11% Similarity=0.096 Sum_probs=149.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC-CceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++|+.++++++ ...++++|+|
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG 87 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASL---PANEKIILVG 87 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTS---CTTSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhc---CCCCCEEEEE
Confidence 578999999999999999999999964 799999999999998 6788899999998873 1367999999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHh-hchhhhHHhHHH--hhh----hhcCchhhhHHHHH
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQITTMLSS--TLS----LMTGDPLKMAMDNV 274 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~ 274 (709)
|||||.+|+.+|.++|++|+++|++++................. ............ ... ...... ......+
T Consensus 88 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 166 (267)
T 3sty_A 88 HALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP-KFLATNV 166 (267)
T ss_dssp ETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH-HHHHHHT
T ss_pred EcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH-HHHHHhh
Confidence 99999999999999999999999999866543322211111110 000000000000 000 000000 0000000
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~ 354 (709)
.. ........ ... . ............ +.... ........++|+++|+|++|.+++++. .+.
T Consensus 167 ~~-~~~~~~~~-~~~---~----------~~~~~~~~~~~~-~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 227 (267)
T 3sty_A 167 YH-LSPIEDLA-LAT---A----------LVRPLYLYLAED-ISKEV--VLSSKRYGSVKRVFIVATENDALKKEF-LKL 227 (267)
T ss_dssp ST-TSCHHHHH-HHH---H----------HCCCEECCCHHH-HHHHC--CCCTTTGGGSCEEEEECCCSCHHHHHH-HHH
T ss_pred cc-cCCHHHHH-HHH---H----------hhccchhHHHHH-hhcch--hcccccccCCCEEEEEeCCCCccCHHH-HHH
Confidence 00 00000000 000 0 000000000000 00000 001112226999999999999999997 999
Q ss_pred HHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 355 LSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 355 l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.+.++++++++++++||++++|+|+++++.|.++
T Consensus 228 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 262 (267)
T 3sty_A 228 MIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLSI 262 (267)
T ss_dssp HHHHSCCSEEEECTTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHhCCCceEEEeCCCCccccccChHHHHHHHHHH
Confidence 99999999999999999999999999999999943
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-24 Score=223.74 Aligned_cols=106 Identities=21% Similarity=0.203 Sum_probs=91.3
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVR 186 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~ 186 (709)
.++|.+.|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++
T Consensus 22 ~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~ 97 (328)
T 2cjp_A 22 NMHLAELGE----GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLE 97 (328)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHHHHHHHHHHH
Confidence 355666664 6789999999999999999999996 5899999999999988 24678999999998
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
++.. ..++++|+||||||.+|+.+|.++|++|+++|+++++.
T Consensus 98 ~l~~--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 98 AIAP--NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHF 139 (328)
T ss_dssp HHCT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HhcC--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCC
Confidence 8431 15789999999999999999999999999999998753
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-24 Score=220.28 Aligned_cols=250 Identities=15% Similarity=0.127 Sum_probs=151.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHH-HHHHhcC-CceEEEEeCCCCCCC----------CHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIR-QHQRLGK-IFDIWCLHIPVKDRT----------SFTGLVKLVESTVR 186 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~-~~~~L~~-~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~ 186 (709)
.++|.+.|++ ++|+|||+||++++...|.. +++.|++ ||+|+++|+||||.| +++++++|+.++++
T Consensus 12 ~l~y~~~G~~--~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a~dl~~~l~ 89 (298)
T 1q0r_A 12 ELWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLD 89 (298)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHH
T ss_pred EEEEEeccCC--CCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHH
Confidence 3556666642 46789999999999999987 4589965 699999999999988 35789999999998
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC-Ccchhhhhhh---hHHH-hhchhhhHHhHHHhhhh
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT-SFNKSVLQST---IPLL-ELIPGQITTMLSSTLSL 261 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~-~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 261 (709)
+ .+.++++|+||||||.+|+.+|.++|++|+++|++++.. .......... ...+ ...+......+..+...
T Consensus 90 ~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T 1q0r_A 90 G----WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALM 165 (298)
T ss_dssp H----TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHH
T ss_pred H----hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhcc
Confidence 8 456789999999999999999999999999999999865 2111100000 0000 00000000000000000
Q ss_pred h--cCchhhh---H---HHHHh-hcc-CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhh-ccc
Q 005190 262 M--TGDPLKM---A---MDNVA-KRL-SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSR-LHA 330 (709)
Q Consensus 262 ~--~~~~~~~---~---~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 330 (709)
. ....... . ..... ... ...+................ .......+ ... ........ +.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~--~~~~~~~~~l~~ 235 (298)
T 1q0r_A 166 NQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGV----LAEPYAHY----SLT--LPPPSRAAELRE 235 (298)
T ss_dssp HSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTC----CSCCCGGG----GCC--CCCGGGGGGGGG
T ss_pred CcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCc----cchhhhhh----hhh--cCcccccccccc
Confidence 0 0000000 0 00000 000 00111111111100000000 00000000 000 01122345 788
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 331 VKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 331 i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++|+|+|+|++|.+++++. .+.+++.+|++++++++++|| |.|+++++.|.+|
T Consensus 236 i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH----e~p~~~~~~i~~f 289 (298)
T 1q0r_A 236 VTVPTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGH----ALPSSVHGPLAEV 289 (298)
T ss_dssp CCSCEEEEEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCS----SCCGGGHHHHHHH
T ss_pred cCCCEEEEEeCCCccCCHHH-HHHHHHhCCCCEEEEcCCCCC----CCcHHHHHHHHHH
Confidence 99999999999999999997 899999999999999999999 7889999988844
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=219.34 Aligned_cols=250 Identities=17% Similarity=0.175 Sum_probs=158.1
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~ 189 (709)
++|...|++ ++|+|||+||++++...|..+++.|. +||+|+++|+||||.| +++++++|+.+++++
T Consensus 16 l~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-- 91 (286)
T 3qit_A 16 ICLCSWGSP--EHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQE-- 91 (286)
T ss_dssp EEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHHHHHHHHHHH--
T ss_pred EEEeecCCC--CCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHh--
Confidence 445555542 57899999999999999999999996 5699999999999988 568889999999987
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhc---Cch
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT---GDP 266 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 266 (709)
.+.++++++|||+||.+|+.+|.++|++++++|++++...............+..... ....... ...
T Consensus 92 --~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 162 (286)
T 3qit_A 92 --LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLD-------YLSSTPQHPIFPD 162 (286)
T ss_dssp --SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHH-------HHTCCCCCCCBSS
T ss_pred --cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHH-------HHhcccccccccc
Confidence 5567899999999999999999999999999999998766543331111110000000 0000000 000
Q ss_pred hhhHHHHHhh--ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-----hhhHhhhhcccCCccEEEEe
Q 005190 267 LKMAMDNVAK--RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-----ASAYANSRLHAVKAQMLVLC 339 (709)
Q Consensus 267 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~PvLvi~ 339 (709)
.......... ..........+...... .............. ........ ........+.++++|+|+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 238 (286)
T 3qit_A 163 VATAASRLRQAIPSLSEEFSYILAQRITQ--PNQGGVRWSWDAII--RTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVY 238 (286)
T ss_dssp HHHHHHHHHHHSTTSCHHHHHHHHHHTEE--EETTEEEECSCGGG--GGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEE
T ss_pred HHHHHHHhhcCCcccCHHHHHHHhhcccc--ccccceeeeechhh--hccccccccccccchhHHHHHHhccCCCeEEEE
Confidence 0000000000 00001111111110000 00000000000000 00000000 11223355678999999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
|++|.+++.+. .+.+.+.+++++++++++ ||++++|+|+++++.|.+
T Consensus 239 g~~D~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 239 GDSSKLNRPED-LQQQKMTMTQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp ETTCCSSCHHH-HHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred eCCCcccCHHH-HHHHHHHCCCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 99999999997 899999999999999999 999999999999999874
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=222.41 Aligned_cols=238 Identities=16% Similarity=0.115 Sum_probs=156.8
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC--CceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhcc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~ 191 (709)
++|...|+ +|+|||+||++++...|..++..|.+ +|+|+++|+||||.| +++++++|+.++++++
T Consensus 13 l~y~~~g~----~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~l~~~--- 85 (272)
T 3fsg_A 13 ISYFSIGS----GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIEAIEEI--- 85 (272)
T ss_dssp CEEEEECC----SSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHHHHHHHHHHHHHHH---
T ss_pred EEEEEcCC----CCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---
Confidence 44556664 67899999999999999999999975 999999999999999 6799999999998873
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHH---hhchhhhH-HhHHHhhhhhcCchh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLL---ELIPGQIT-TMLSSTLSLMTGDPL 267 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+||||||.+|+.+|.++|++++++|+++|................ ......+. .....+......
T Consensus 86 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 162 (272)
T 3fsg_A 86 IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVI--- 162 (272)
T ss_dssp HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSE---
T ss_pred hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhcc---
Confidence 23578999999999999999999999999999999986543222110000000 00000000 000000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH--hhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
........+....... . ....... ...+... ........+.++++|+|+|+|++|.+
T Consensus 163 -----------~~~~~~~~~~~~~~~~------~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 221 (272)
T 3fsg_A 163 -----------INNQAWHDYQNLIIPG------L-QKEDKTF---IDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQV 221 (272)
T ss_dssp -----------ESHHHHHHHHHHTHHH------H-HHCCHHH---HHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTT
T ss_pred -----------CCCchhHHHHHHhhhh------h-hhccHHH---HHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCc
Confidence 0000000010000000 0 0000000 0000000 01111124578899999999999999
Q ss_pred CCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 222 ~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 264 (272)
T 3fsg_A 222 VGYQE-QLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDLF 264 (272)
T ss_dssp TCSHH-HHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHHHH
Confidence 99997 89999999999999999999999999999999999954
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=223.46 Aligned_cols=241 Identities=16% Similarity=0.122 Sum_probs=159.8
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHH-HHHHHh-cCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhh
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLI-RQHQRL-GKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~-~~~~~L-~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~ 189 (709)
..+.|...|+ +|+|||+||++++...|. .+...| +++|+|+++|+||||.| +++++++|+.++++++
T Consensus 33 ~~l~y~~~g~----~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~l~~l- 107 (293)
T 3hss_A 33 INLAYDDNGT----GDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETL- 107 (293)
T ss_dssp EEEEEEEECS----SEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCSCCHHHHHHHHHHHHHHH-
T ss_pred ceEEEEEcCC----CCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcccCCHHHHHHHHHHHHHhc-
Confidence 3566777775 778999999999999998 677777 68999999999999988 7899999999999884
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
+.++++|+|||+||.+|+.+|.++|+.++++|++++............ ........ . .........
T Consensus 108 ---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~-------~---~~~~~~~~~ 173 (293)
T 3hss_A 108 ---DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFN-KAEAELYD-------S---GVQLPPTYD 173 (293)
T ss_dssp ---TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHH-HHHHHHHH-------H---TCCCCHHHH
T ss_pred ---CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHH-HHHHHHHh-------h---cccchhhHH
Confidence 457899999999999999999999999999999999765433221100 00000000 0 000000000
Q ss_pred HHHHHhh-----ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH-HhhhHhhhhcccCCccEEEEeeCCC
Q 005190 270 AMDNVAK-----RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 270 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
....... ................. .............. .........+.++++|+|+|+|++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D 242 (293)
T 3hss_A 174 ARARLLENFSRKTLNDDVAVGDWIAMFSM-----------WPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADD 242 (293)
T ss_dssp HHHHHHHHSCHHHHTCHHHHHHHHHHHHH-----------SCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTC
T ss_pred HHHHHhhhcccccccccccHHHHHHHHhh-----------ccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCC
Confidence 0000000 00000000000000000 00000000000000 0111223556889999999999999
Q ss_pred CCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 344 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+++++. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 243 ~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 287 (293)
T 3hss_A 243 VVTPPYL-GREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKF 287 (293)
T ss_dssp SSSCHHH-HHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred CCCCHHH-HHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHHHH
Confidence 9999997 99999999999999999999999999999999999944
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=218.49 Aligned_cols=256 Identities=14% Similarity=0.125 Sum_probs=147.9
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~ 190 (709)
++|...|+ .++.++|||+||++++...|......+ .++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 17 l~~~~~g~-~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl~~~~~~l~- 94 (293)
T 1mtz_A 17 IYYKLCKA-PEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF- 94 (293)
T ss_dssp EEEEEECC-SSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHHH-
T ss_pred EEEEEECC-CCCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHHHHHHHHhc-
Confidence 45666664 112378999999876665554444444 56799999999999998 45788999999998841
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhh-hhcCchhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS-LMTGDPLKM 269 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 269 (709)
+.++++|+||||||.+|+.+|.++|++|+++|++++........ .....+...++......+..... .........
T Consensus 95 --~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (293)
T 1mtz_A 95 --GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV-KEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQ 171 (293)
T ss_dssp --TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH-HHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHH
T ss_pred --CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHH-HHHHHHHHhcCHHHHHHHHHhhccCCcChHHHH
Confidence 34689999999999999999999999999999999865421100 00001111111110000000000 000000000
Q ss_pred -HHHHHhh-c----cCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCC
Q 005190 270 -AMDNVAK-R----LSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 270 -~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
....... . ................. . .+........+. ....+ ......+.+.++++|+|+|+|++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~i~~P~lii~G~~D 244 (293)
T 1mtz_A 172 EAVNYFYHQHLLRSEDWPPEVLKSLEYAERR-N---VYRIMNGPNEFT-ITGTI--KDWDITDKISAIKIPTLITVGEYD 244 (293)
T ss_dssp HHHHHHHHHHTSCSSCCCHHHHHHHHHHHHS-S---HHHHHTCSBTTB-CCSTT--TTCBCTTTGGGCCSCEEEEEETTC
T ss_pred HHHHHHHHhhcccccCchHHHHHhHhhhccc-h---hhhhccCcceec-ccccc--cCCChhhhhccCCCCEEEEeeCCC
Confidence 0000000 0 00000000000000000 0 000000000000 00000 001123466789999999999999
Q ss_pred CCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 344 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+++.. ++.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 245 -~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 288 (293)
T 1mtz_A 245 -EVTPNV-ARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDF 288 (293)
T ss_dssp -SSCHHH-HHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred -CCCHHH-HHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 677775 88999999999999999999999999999999999954
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.6e-24 Score=222.82 Aligned_cols=238 Identities=19% Similarity=0.186 Sum_probs=162.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC-CceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
+.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++|+.++++.+....+..+++|+|
T Consensus 59 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G 138 (342)
T 3hju_A 59 PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLG 138 (342)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 477899999999999999999999965 899999999999988 66889999999999988887777999999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC-
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL- 280 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 280 (709)
|||||.+++.+|..+|++++++|+++|.................. ............... ......
T Consensus 139 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~ 205 (342)
T 3hju_A 139 HSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAK-------VLNLVLPNLSLGPID------SSVLSRN 205 (342)
T ss_dssp ETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHH-------HHHHHCTTCBCCCCC------GGGSCSC
T ss_pred eChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHH-------HHHHhccccccCccc------ccccccc
Confidence 999999999999999999999999999765433221111111110 001111111000000 000000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
.........+.. .........+...... ........+.++++|+|+|+|++|.+++.+. .+.+.+.++
T Consensus 206 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~ 273 (342)
T 3hju_A 206 KTEVDIYNSDPL----------ICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRLCDSKG-AYLLMELAK 273 (342)
T ss_dssp HHHHHHHHTCTT----------CCCSCCBHHHHHHHHH-HHHHHHHHGGGCCSCEEEEEETTCSSSCHHH-HHHHHHHCC
T ss_pred hHHHHHHhcCcc----------cccccccHHHHHHHHH-HHHHHHHHHHhCCcCEEEEEeCCCcccChHH-HHHHHHHcC
Confidence 011111110000 0011111222222222 1123345678899999999999999999996 999999888
Q ss_pred --CcEEEEEcCCCccccccChhhHHHHHhhc-cccc
Q 005190 361 --KCEPRNFYGHGHFLLLEDGVDLVTIIKGA-SYYR 393 (709)
Q Consensus 361 --~~~~~~i~~aGH~~~le~p~~~~~~I~~~-~f~~ 393 (709)
++++++++++||++++++|+.+.+.+.+. .|+.
T Consensus 274 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~ 309 (342)
T 3hju_A 274 SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVS 309 (342)
T ss_dssp CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHh
Confidence 79999999999999999999888876654 4443
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=218.74 Aligned_cols=209 Identities=15% Similarity=0.187 Sum_probs=148.6
Q ss_pred CCCEEEEeCCCCCC--cccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGV--GLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s--~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+.|+|||+||++++ ...|..+++.|+ .+|+|+++|+||||.| ++.++++|+.++++.+......++++|+
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lv 105 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMA 105 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcccceEEEE
Confidence 46789999999999 888999999995 6899999999999998 5678899999999987654334689999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+|+.+|.++|++++++|+++|........ .... ...... ... ...
T Consensus 106 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~----------~~~~~~-~~~---------~~~- 157 (251)
T 2wtm_A 106 GHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIA-------RTGE----------LLGLKF-DPE---------NIP- 157 (251)
T ss_dssp EETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHH-------HHTE----------ETTEEC-BTT---------BCC-
T ss_pred EECcchHHHHHHHHhCcccceEEEEECcHHHhHHHH-------hhhh----------hccccC-Cch---------hcc-
Confidence 999999999999999999999999998854321100 0000 000000 000 000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
....... .. .... .+ .... ........+.++++|+|+|+|++|.+++.+. ++.+.+.++
T Consensus 158 -~~~~~~~----~~---------~~~~-~~---~~~~--~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~~~ 216 (251)
T 2wtm_A 158 -DELDAWD----GR---------KLKG-NY---VRVA--QTIRVEDFVDKYTKPVLIVHGDQDEAVPYEA-SVAFSKQYK 216 (251)
T ss_dssp -SEEEETT----TE---------EEET-HH---HHHH--TTCCHHHHHHHCCSCEEEEEETTCSSSCHHH-HHHHHHHSS
T ss_pred -hHHhhhh----cc---------ccch-HH---HHHH--HccCHHHHHHhcCCCEEEEEeCCCCCcChHH-HHHHHHhCC
Confidence 0000000 00 0000 00 0000 0011123456789999999999999999997 889999999
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++||++ .|+|+++++.|.+|
T Consensus 217 ~~~~~~~~~~gH~~-~~~~~~~~~~i~~f 244 (251)
T 2wtm_A 217 NCKLVTIPGDTHCY-DHHLELVTEAVKEF 244 (251)
T ss_dssp SEEEEEETTCCTTC-TTTHHHHHHHHHHH
T ss_pred CcEEEEECCCCccc-chhHHHHHHHHHHH
Confidence 99999999999999 99999999999955
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-24 Score=215.33 Aligned_cols=230 Identities=18% Similarity=0.200 Sum_probs=139.7
Q ss_pred CCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCC--
Q 005190 126 GSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRP-- 196 (709)
Q Consensus 126 g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~-- 196 (709)
|++..++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++. ...++
T Consensus 10 g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~~----l~~~~~p 85 (264)
T 1r3d_A 10 AKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQA----HVTSEVP 85 (264)
T ss_dssp SCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHT----TCCTTSE
T ss_pred CCCCCCCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCCccCHHHHHHHHHHHHHH----hCcCCCc
Confidence 4432234889999999999999999999998 8999999999999998 578888999998887 33344
Q ss_pred EEEEEechhHHHHHH---HHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh--chhhhH-HhHHHhhhhhcCchhhhH
Q 005190 197 VYLVGESLGACIALA---VAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL--IPGQIT-TMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 197 v~LvGhS~GG~iAl~---~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~ 270 (709)
++|+||||||.+|+. +|.++|++|+++|++++.......... ....... ...... ......+..+....
T Consensus 86 ~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 160 (264)
T 1r3d_A 86 VILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEK-AARWQHDQQWAQRFSQQPIEHVLSDWYQQA---- 160 (264)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHH-HHHHHHHHHHHHHHHHSCHHHHHHHHTTSG----
T ss_pred eEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhh-hhhhcccHHHHHHhccccHHHHHHHHhhhh----
Confidence 999999999999999 888999999999999875443221100 0000000 000000 00000000000000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh----hhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA----SAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
...... ........... ......... ..+... .....+.+.++++|+|+|+|++|..+
T Consensus 161 ---~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 222 (264)
T 1r3d_A 161 ---VFSSLN-HEQRQTLIAQR-----------SANLGSSVA---HMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF 222 (264)
T ss_dssp ---GGTTCC-HHHHHHHHHHH-----------TTSCHHHHH---HHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH
T ss_pred ---hhhccC-HHHHHHHHHHH-----------hhcchHHHH---HHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchH
Confidence 000000 00000000000 000011111 111110 11223456789999999999999754
Q ss_pred CcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 347 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 347 ~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+ .+.+..+ .++++++++||++++|+|+++++.|.+|
T Consensus 223 ~------~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~f 258 (264)
T 1r3d_A 223 Q------QLAESSG-LSYSQVAQAGHNVHHEQPQAFAKIVQAM 258 (264)
T ss_dssp H------HHHHHHC-SEEEEETTCCSCHHHHCHHHHHHHHHHH
T ss_pred H------HHHHHhC-CcEEEcCCCCCchhhcCHHHHHHHHHHH
Confidence 2 2333333 7899999999999999999999999954
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-24 Score=221.59 Aligned_cols=242 Identities=14% Similarity=0.112 Sum_probs=161.3
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccC
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~ 192 (709)
+.|...|+ +|+||++||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++++
T Consensus 60 ~~~~~~g~----~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l---- 131 (314)
T 3kxp_A 60 LNVREKGS----GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIRTL---- 131 (314)
T ss_dssp EEEEEECC----SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH----
T ss_pred EEEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHHHHHHHHHHHh----
Confidence 44555554 77999999999999999999999988899999999999999 7899999999999984
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhh---hHHhHHHhhhhhcCchhhh
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ---ITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 269 (709)
+.++++|+||||||.+++.+|.++|+.++++|++++...................+.. .......+..
T Consensus 132 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 202 (314)
T 3kxp_A 132 ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAG--------- 202 (314)
T ss_dssp TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHHHH---------
T ss_pred CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHHHh---------
Confidence 3468999999999999999999999999999999986654333222211111111100 0000000000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
..... .............. .....+....... ................+.++++|+|+++|++|.+++.+
T Consensus 203 ----~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~ 272 (314)
T 3kxp_A 203 ----RYPNI-PADAIRIRAESGYQ--PVDGGLRPLASSA---AMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAA 272 (314)
T ss_dssp ----HSTTS-CHHHHHHHHHHSEE--EETTEEEESSCHH---HHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHH
T ss_pred ----hcccC-chHHHHHHhhhhhc--ccccccccccChh---hhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHH
Confidence 00000 00011111000000 0000000000000 11111111111333556789999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 350 EEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 350 ~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
. .+.+.+.++++++++++++||+++.|+|+++++.|.+|
T Consensus 273 ~-~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~~f 311 (314)
T 3kxp_A 273 A-LAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAITNF 311 (314)
T ss_dssp H-HHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHHHH
T ss_pred H-HHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHH
Confidence 7 99999999999999999999999999999999999954
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=227.19 Aligned_cols=251 Identities=11% Similarity=0.068 Sum_probs=150.9
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|.+.|+. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 32 ~l~y~~~G~g--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ll~~--- 106 (318)
T 2psd_A 32 FINYYDSEKH--AENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFEL--- 106 (318)
T ss_dssp EEEEEECCSC--TTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHHHHHHHHTT---
T ss_pred EEEEEEcCCC--CCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHHHHHHHHHh---
Confidence 3556666651 246899999999999999999999988899999999999998 468888999998887
Q ss_pred cCCC-CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcc--hhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 191 RSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN--KSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 191 ~~~~-~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+. ++++|+||||||.+|+.+|.++|++|+++|++++..... ..........+..+...... ... .....+
T Consensus 107 -l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~ 180 (318)
T 2psd_A 107 -LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGE---KMV--LENNFF 180 (318)
T ss_dssp -SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHH---HHH--TTTCHH
T ss_pred -cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccch---hhh--hcchHH
Confidence 445 789999999999999999999999999999987642211 00000000111100000000 000 000000
Q ss_pred hh-HHHH-HhhccCCchHHHHHHHhHHHh---hcchhhhhhcCChh--hHHHHHHHHHHhhhHhhhhcccC-CccEEEEe
Q 005190 268 KM-AMDN-VAKRLSLQPTIQDLSQDLVAL---SSYLPVLADILPKE--TLLWKIELLKAASAYANSRLHAV-KAQMLVLC 339 (709)
Q Consensus 268 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i-~~PvLvi~ 339 (709)
.. .... ..... ..+............ ......+....... ......... ......+.++ ++|+|+|+
T Consensus 181 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~~P~Lvi~ 255 (318)
T 2psd_A 181 VETVLPSKIMRKL-EPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIV----RNYNAYLRASDDLPKLFIE 255 (318)
T ss_dssp HHTHHHHTCSSCC-CHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHH----HHHHHHHHTCTTSCEEEEE
T ss_pred HHhhccccccccC-CHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHH----HHHHHHhccccCCCeEEEE
Confidence 00 0000 00000 000011000000000 00000000000000 000000011 1112345678 99999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 340 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|++| ++++ . .+.+.+.+++++++++ ++||++++|+|+++++.|.+|
T Consensus 256 G~~D-~~~~-~-~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~f 301 (318)
T 2psd_A 256 SDPG-FFSN-A-IVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIKSF 301 (318)
T ss_dssp EEEC-SSHH-H-HHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHHHH
T ss_pred eccc-cCcH-H-HHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHHHH
Confidence 9999 8877 5 8899999999999999 789999999999999999944
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-24 Score=220.58 Aligned_cols=238 Identities=15% Similarity=0.137 Sum_probs=155.4
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCC-CCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~-G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
+.|...|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||| |.| +++++++|+.+++++
T Consensus 57 ~~~~~~g~~--~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~---- 130 (306)
T 2r11_A 57 THVIASGPE--DAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDN---- 130 (306)
T ss_dssp EEEEEESCT--TSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHH----
T ss_pred EEEEeeCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----
Confidence 344445542 478999999999999999999999988999999999999 877 678999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHH
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (709)
.+.++++|+||||||.+|+.+|..+|++|+++|+++|......................... .........
T Consensus 131 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------ 201 (306)
T 2r11_A 131 LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVE---TFLNWMMND------ 201 (306)
T ss_dssp TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHH---HHHHHHTTT------
T ss_pred cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHH---HHHHHhhCC------
Confidence 44578999999999999999999999999999999987654222111110000000000000 000000000
Q ss_pred HHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005190 272 DNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~ 351 (709)
...................... ..+.... ...........+.++++|+|+++|++|.+++.+.
T Consensus 202 -----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 264 (306)
T 2r11_A 202 -----QNVLHPIFVKQFKAGVMWQDGS----RNPNPNA-------DGFPYVFTDEELRSARVPILLLLGEHEVIYDPHS- 264 (306)
T ss_dssp -----CCCSCHHHHHHHHHHHHCCSSS----CCCCCCT-------TSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHH-
T ss_pred -----ccccccccccccHHHHHHHHhh----hhhhhhc-------cCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHH-
Confidence 0000000000000000000000 0000000 0000001224567899999999999999999886
Q ss_pred HH-HHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 352 GE-RLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 352 ~~-~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.. .+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 303 (306)
T 2r11_A 265 ALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMRF 303 (306)
T ss_dssp HHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHHH
Confidence 65 555578999999999999999999999999999954
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=221.53 Aligned_cols=238 Identities=13% Similarity=0.124 Sum_probs=156.9
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHH-hcCCceEEEEeCCCCCCC----------CHHHHHHHHHHHHHHh
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR-LGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~-L~~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~~ 188 (709)
++|...+. ++|+|||+||++++...|..+++. ++++|+|+++|+||||.| +++++++++.++++.+
T Consensus 15 ~~~~~~~~---~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (279)
T 4g9e_A 15 IAVRESEG---EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL 91 (279)
T ss_dssp EEEEECCC---CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCC---CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh
Confidence 44555544 478899999999999999999999 578999999999999998 5688899999999873
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhH---HHhh-chhhhHHhHHHhhhhhcC
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP---LLEL-IPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~ 264 (709)
+.++++|+||||||.+|+.+|.++|+ +.++|+++++............. .... .................
T Consensus 92 ----~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 165 (279)
T 4g9e_A 92 ----GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTC- 165 (279)
T ss_dssp ----TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHH-
T ss_pred ----CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhc-
Confidence 45689999999999999999999999 77888888755433222100000 0000 00000000000000000
Q ss_pred chhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-hhhHhhhhcccCCccEEEEeeCCC
Q 005190 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
.............. ............+.. ........+.++++|+|+|+|++|
T Consensus 166 -----------~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 219 (279)
T 4g9e_A 166 -----------GEPFEASLLDIVAR---------------TDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDE 219 (279)
T ss_dssp -----------CSSCCHHHHHHHHH---------------SCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTC
T ss_pred -----------cCcccHHHHHHHHh---------------hhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCC
Confidence 00000000100000 011111111111111 112223456788999999999999
Q ss_pred CCCCcHHHHHHHH-hhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 344 QLMPSQEEGERLS-SALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 344 ~~v~~~~~~~~l~-~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
.+++.+. .+.+. +..+++++++++++||++++|+|+++++.|. .|+++.
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~ 269 (279)
T 4g9e_A 220 PFVELDF-VSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLA--RFIRDC 269 (279)
T ss_dssp SSBCHHH-HTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHH--HHHHHH
T ss_pred cccchHH-HHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHH--HHHHHh
Confidence 9999997 77777 7788999999999999999999999999999 455443
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=217.11 Aligned_cols=241 Identities=15% Similarity=0.112 Sum_probs=148.9
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------------CHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVR 186 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------------s~~~~~~dl~~~l~ 186 (709)
.++|.+.|+ +++|||+||++++...|..+.+.|+++|+|+++|+||||.| +.+.+++|+.++++
T Consensus 16 ~~~~~~~g~----g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (291)
T 3qyj_A 16 RINLVKAGH----GAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMS 91 (291)
T ss_dssp EEEEEEECC----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccCHHHHHHHHHHHHH
Confidence 455666665 67899999999999999999999999999999999999998 34677888888887
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh-HHHhh--------chhhhHHhHHH
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-PLLEL--------IPGQITTMLSS 257 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~ 257 (709)
. .+.++++|+||||||.+|+.+|.++|++++++|++++...... ..... .+... .+..... .
T Consensus 92 ~----l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 162 (291)
T 3qyj_A 92 K----LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKM--YRTTDQEFATAYYHWFFLIQPDNLPE---T 162 (291)
T ss_dssp H----TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHH--HHTCCHHHHHHTTHHHHTTCSTTHHH---H
T ss_pred H----cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchh--hhcchhhhhHHHHHHHHhccCCCchH---H
Confidence 7 5567899999999999999999999999999999987432110 00000 00000 0000000 0
Q ss_pred hhhhhcCchhhhHHHHHhh-----ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-----hhhHhhhh
Q 005190 258 TLSLMTGDPLKMAMDNVAK-----RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-----ASAYANSR 327 (709)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 327 (709)
.+ ..++.......+.. .....+....+.... ............... ........
T Consensus 163 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 3qyj_A 163 LI---GANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCF-------------SQPAVIHATCEDYRAAATIDLEHDELDM 226 (291)
T ss_dssp HH---HTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHH-------------TSHHHHHHHHHHHHHHTTHHHHHHHTTT
T ss_pred HH---cCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHh-------------cCCCcchhHHHHHHcccccchhhcchhc
Confidence 00 00000000000000 000001111111000 011111111111110 01112235
Q ss_pred cccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 328 LHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 328 l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.+++||+|+|+|++|.+.+.......+.+..++++..+++ +||++++|+|+++++.|.+|
T Consensus 227 ~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~~f 287 (291)
T 3qyj_A 227 KQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIYNF 287 (291)
T ss_dssp TCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHHHH
T ss_pred CCccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHHHH
Confidence 67899999999999997653211245666777888888886 89999999999999999954
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.4e-24 Score=218.06 Aligned_cols=239 Identities=9% Similarity=0.024 Sum_probs=156.6
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~ 187 (709)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 19 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~ 94 (297)
T 2qvb_A 19 RMAYIDEGK----GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDA 94 (297)
T ss_dssp EEEEEEESS----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHH
T ss_pred EEEEEecCC----CCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHHHHHHHHHHHHH
Confidence 455666665 68999999999999999999999988899999999999988 357888999999988
Q ss_pred hhccCCC-CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-h-hhhhHHHhhchhhh-HHhH---HHhhh
Q 005190 188 ESNRSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-L-QSTIPLLELIPGQI-TTML---SSTLS 260 (709)
Q Consensus 188 ~~~~~~~-~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~---~~~~~ 260 (709)
.+. ++++|+||||||.+|+.+|.++|++++++|+++|........ . ......+..+.... .... ...+.
T Consensus 95 ----~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (297)
T 2qvb_A 95 ----LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVE 170 (297)
T ss_dssp ----TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHHHHTTCHHHH
T ss_pred ----cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhhhccccHHHH
Confidence 445 789999999999999999999999999999999866422110 0 00011111100000 0000 00000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCCh-hhHHHHHHHHH------------HhhhHhhhh
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPK-ETLLWKIELLK------------AASAYANSR 327 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~ 327 (709)
... ..........+......... ... ........+.. .........
T Consensus 171 ~~~--------~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (297)
T 2qvb_A 171 RVL--------PGAILRQLSDEEMNHYRRPF-------------VNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSW 229 (297)
T ss_dssp THH--------HHTCSSCCCHHHHHHHHGGG-------------CSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHH
T ss_pred HHH--------hccccccCCHHHHHHHHHHh-------------cCcccchhhHHHHHHhccccCCchhhHHHHHHHHhh
Confidence 000 00000000001111111000 000 00000111111 011223356
Q ss_pred cccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 328 LHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 328 l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.++++|+|+|+|++|.+++.+. .+.+.+.+++ +++++ ++||++++|+|+++++.|.+|
T Consensus 230 l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~~f 288 (297)
T 2qvb_A 230 LEETDMPKLFINAEPGAIITGRI-RDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIAQF 288 (297)
T ss_dssp HHHCCSCEEEEEEEECSSSCHHH-HHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHHHH
T ss_pred cccccccEEEEecCCCCcCCHHH-HHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHHHH
Confidence 67899999999999999999996 9999999999 99999 999999999999999999954
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=221.26 Aligned_cols=253 Identities=9% Similarity=0.026 Sum_probs=156.2
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~ 187 (709)
.++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 20 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (302)
T 1mj5_A 20 RMAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEA 95 (302)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 345666664 67899999999999999999999988899999999999987 457889999999988
Q ss_pred hhccCCC-CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh-h-hhhhHHHhhchhhhHHhHHHhhhhhcC
Q 005190 188 ESNRSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-L-QSTIPLLELIPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 188 ~~~~~~~-~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (709)
.+. ++++|+||||||.+|+.+|.++|++++++|+++|........ . ......+..+...... .... ...
T Consensus 96 ----l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~ 167 (302)
T 1mj5_A 96 ----LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGE---ELVL-QDN 167 (302)
T ss_dssp ----TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHH---HHHT-TTC
T ss_pred ----hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchh---hhhc-ChH
Confidence 445 789999999999999999999999999999999866422110 0 0011111110000000 0000 000
Q ss_pred chhhhHHHHHhhccCCchHHHHHHHhHHH---hhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeC
Q 005190 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVA---LSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG 341 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~ 341 (709)
.................+........... ...........+....... ............+.++++|+|+|+|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~i~~P~l~i~g~ 244 (302)
T 1mj5_A 168 VFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA---DVVAIARDYAGWLSESPIPKLFINAE 244 (302)
T ss_dssp HHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH---HHHHHHHHHHHHHTTCCSCEEEEEEE
T ss_pred HHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccch---hhHHHHHHHHhhhhccCCCeEEEEeC
Confidence 00000000000000000111111000000 0000000000000000000 00001112235678899999999999
Q ss_pred CCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 342 KDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 342 ~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|.+++++. .+.+.+.+++ +++++ ++||++++|+|+++++.|.+|
T Consensus 245 ~D~~~~~~~-~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~~f 289 (302)
T 1mj5_A 245 PGALTTGRM-RDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIAAF 289 (302)
T ss_dssp ECSSSSHHH-HHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHHHH
T ss_pred CCCCCChHH-HHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHHHH
Confidence 999999996 9999999999 99999 999999999999999999944
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-24 Score=222.85 Aligned_cols=244 Identities=17% Similarity=0.186 Sum_probs=153.8
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~ 191 (709)
+.|...|. ++|+|||+||++++...|..++..| +|+|+++|+||||.| +++++++|+.+++++
T Consensus 72 ~~~~~~g~---~~~~vv~~hG~~~~~~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~---- 142 (330)
T 3p2m_A 72 ISALRWGG---SAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRE---- 142 (330)
T ss_dssp EEEEEESS---SCCSEEEECCTTCCGGGGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHHH----
T ss_pred EEEEEeCC---CCCeEEEECCCCCccchHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Confidence 44555565 4678999999999999999999998 899999999999999 578999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHH
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++......... ........... ...............
T Consensus 143 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~ 214 (330)
T 3p2m_A 143 LAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHA-----ELTAEQRGTVA---LMHGEREFPSFQAML 214 (330)
T ss_dssp SSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHH-----HHTCC--------------CCBSCHHHHH
T ss_pred hCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhh-----hhhhhhhhhhh---hhcCCccccCHHHHH
Confidence 4567899999999999999999999999999999998533111100 00000000000 000000000000000
Q ss_pred HHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH--hhhHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 272 DNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
......... .....+.......... .....+.+....+.. ........+.++++|+|+|+|++|.+++++
T Consensus 215 ~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~ 286 (330)
T 3p2m_A 215 DLTIAAAPH-RDVKSLRRGVFHNSRR-------LDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQ 286 (330)
T ss_dssp HHHHHHCTT-SCHHHHHHHHHTTEEE-------CSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHH
T ss_pred HHHHhcCCC-CCHHHHHHHHHhcccc-------cCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHH
Confidence 000000000 0000000000000000 000000000000000 000112456788999999999999999999
Q ss_pred HHHHHHHhhcCCcE-EEEEcCCCccccccChhhHHHHHhhc
Q 005190 350 EEGERLSSALHKCE-PRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 350 ~~~~~l~~~~~~~~-~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
. ++.+.+.+++++ +++++++||++++|+|+++++.|.+|
T Consensus 287 ~-~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 326 (330)
T 3p2m_A 287 D-TAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGV 326 (330)
T ss_dssp H-HHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHHHH
T ss_pred H-HHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHHHH
Confidence 7 999999999999 99999999999999999999999944
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=223.73 Aligned_cols=259 Identities=12% Similarity=0.104 Sum_probs=157.8
Q ss_pred ccccccCCCCCC-CCCEEEEeCCCCCCccc-------------HHHHH---HHh-cCCceEEEEeCCCCCCC--------
Q 005190 119 WFSPLECGSHTR-DSPLLLFLPGIDGVGLG-------------LIRQH---QRL-GKIFDIWCLHIPVKDRT-------- 172 (709)
Q Consensus 119 ~~~~~~~g~p~~-~~p~Vv~lHG~~~s~~~-------------~~~~~---~~L-~~~~~Vi~~Dl~G~G~S-------- 172 (709)
.++|...|.+.+ ++|+|||+||++++... |..++ +.| .++|+|+++|+||||.|
T Consensus 28 ~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~ 107 (377)
T 3i1i_A 28 QMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITT 107 (377)
T ss_dssp EEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCC
T ss_pred eEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccC
Confidence 456777775432 46899999999999877 77777 556 57999999999999651
Q ss_pred --------------------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHHhCCCceeEEEE-ecCCC
Q 005190 173 --------------------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLIL-VNPAT 230 (709)
Q Consensus 173 --------------------s~~~~~~dl~~~l~~~~~~~~~~~v~-LvGhS~GG~iAl~~A~~~P~~v~~lVl-~~p~~ 230 (709)
+++++++|+.+++++ .+.++++ |+||||||.+|+.+|.++|++|+++|+ +++..
T Consensus 108 g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~----l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (377)
T 3i1i_A 108 GPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD----MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQ 183 (377)
T ss_dssp STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH----TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSB
T ss_pred CCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH----cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCC
Confidence 458899999999987 5566775 999999999999999999999999999 66644
Q ss_pred Ccchhhhhhhh---HHHhhchhh------------hHHhHHHhhhhhcCchhhhHHHHHhhc---------cCCchHHHH
Q 005190 231 SFNKSVLQSTI---PLLELIPGQ------------ITTMLSSTLSLMTGDPLKMAMDNVAKR---------LSLQPTIQD 286 (709)
Q Consensus 231 ~~~~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 286 (709)
........... ..+...+.. .................. ....+... .........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (377)
T 3i1i_A 184 NPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHF-YETTYPRNSIEVEPYEKVSSLTSFEK 262 (377)
T ss_dssp CCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHH-HHHHSCCCSSCCGGGTCTTCCCHHHH
T ss_pred cCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHH-HHHHhhhhhccccccccccchhHHHH
Confidence 32211110000 000000000 000000000000000000 00000000 000000111
Q ss_pred HHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh-----hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc--
Q 005190 287 LSQDLVALSSYLPVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-- 359 (709)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~-- 359 (709)
....... ..........+......+.... ......+.++++|+|+|+|++|.+++++. ++.+.+.+
T Consensus 263 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~ 335 (377)
T 3i1i_A 263 EINKLTY------RSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRY-NYKMVDLLQK 335 (377)
T ss_dssp HHHHHHH------HTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHH-HHHHHHHHHH
T ss_pred HHHHHHh------hhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHH-HHHHHHHHHh
Confidence 1111100 1111122222222222222111 11235678899999999999999999997 99999988
Q ss_pred --CCcEEEEEcC-CCccccccChhhHHHHHhhc
Q 005190 360 --HKCEPRNFYG-HGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 360 --~~~~~~~i~~-aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++ +||++++|+|+++++.|.+|
T Consensus 336 ~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~f 368 (377)
T 3i1i_A 336 QGKYAEVYEIESINGHMAGVFDIHLFEKKVYEF 368 (377)
T ss_dssp TTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHH
T ss_pred cCCCceEEEcCCCCCCcchhcCHHHHHHHHHHH
Confidence 9999999998 99999999999999999944
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=217.62 Aligned_cols=258 Identities=17% Similarity=0.138 Sum_probs=146.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC--CceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~ 188 (709)
.++|...|. ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++++
T Consensus 28 ~~~~~~~g~---~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~~l 104 (316)
T 3c5v_A 28 TFRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAM 104 (316)
T ss_dssp EEEEEEECS---SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCC---CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 355555554 467899999999999999999999987 999999999999998 5789999999999986
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCCCcchhhhhhhhHHHhhchhh---hHHhHHHhhhhhc
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ---ITTMLSSTLSLMT 263 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 263 (709)
.... .++++|+||||||.+|+.+|.+ +|+ ++++|++++...................+.. .............
T Consensus 105 ~~~~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
T 3c5v_A 105 YGDL-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQ 182 (316)
T ss_dssp HTTC-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTS
T ss_pred hccC-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhccc
Confidence 3222 2689999999999999999996 577 9999999874221100000000111100000 0000000000000
Q ss_pred CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCC
Q 005190 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
....................... ...... ............... ............+.++++|+|+|+|++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~P~Lli~g~~D 254 (316)
T 3c5v_A 183 IRNLESARVSMVGQVKQCEGITS-PEGSKK----DHPYTWRIELAKTEK---YWDGWFRGLSNLFLSCPIPKLLLLAGVD 254 (316)
T ss_dssp CCCHHHHHHHHHHHEEECC-----------------CEEESCCGGGGHH---HHHHHHTTHHHHHHHSSSCEEEEESSCC
T ss_pred ccchhhhhhhhhHHhhhcccccc-cccccc----ccceeeeecccchhh---hhhhhhhhhHHHhhcCCCCEEEEEeccc
Confidence 00000000000000000000000 000000 000000000000000 0000000112344578999999999999
Q ss_pred CCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 344 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
.+.+... .....+++++++++++||++++|+|+++++.|. .|+.+.
T Consensus 255 ~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~ 300 (316)
T 3c5v_A 255 RLDKDLT----IGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVA--TFLIRH 300 (316)
T ss_dssp CCCHHHH----HHHHTTCSEEEECCCCSSCHHHHSHHHHHHHHH--HHHHHT
T ss_pred ccccHHH----HHhhCCceeEEEcCCCCCcccccCHHHHHHHHH--HHHHhc
Confidence 8754332 233456889999999999999999999999999 555544
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=219.62 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=93.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|.+.+++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++.
T Consensus 14 ~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~- 92 (356)
T 2e3j_A 14 RIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDS- 92 (356)
T ss_dssp EEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHHHHHHHHHH-
T ss_pred EEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHHHHHHHHHH-
Confidence 45666666533357899999999999999999999996 5899999999999988 457888999999887
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
.+.++++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 93 ---l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 93 ---YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp ---TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ---cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 456789999999999999999999999999999998765
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-23 Score=215.46 Aligned_cols=236 Identities=13% Similarity=0.124 Sum_probs=153.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~-G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
++|+|||+||++++...|..+++.|+ ++|+|+++|+||| |.| +++++++|+.++++.+. ..+..+++|+|
T Consensus 34 ~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~~~~lvG 112 (305)
T 1tht_A 34 KNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQ-TKGTQNIGLIA 112 (305)
T ss_dssp CSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHH-HTTCCCEEEEE
T ss_pred CCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceehHHHHHHHHHHHHHHH-hCCCCceEEEE
Confidence 46789999999999999999999996 6899999999999 988 56788999999998876 34567999999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||||.+|+.+|.+ | .++++|++++....... ....... .... ....... ... ......
T Consensus 113 hSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~----~~~~~~~--~~~~----~~~~~~~-~~~--------~~~~~~ 171 (305)
T 1tht_A 113 ASLSARVAYEVISD-L-ELSFLITAVGVVNLRDT----LEKALGF--DYLS----LPIDELP-NDL--------DFEGHK 171 (305)
T ss_dssp ETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHH----HHHHHSS--CGGG----SCGGGCC-SEE--------EETTEE
T ss_pred ECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHH----HHHHhhh--hhhh----cchhhCc-ccc--------cccccc
Confidence 99999999999998 7 89999998774321100 0000000 0000 0000000 000 000000
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc--
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-- 359 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~-- 359 (709)
.....+...... ..+ .. .......+.++++|+|+|+|++|.++|++. ++.+.+.+
T Consensus 172 ~~~~~~~~~~~~---------~~~--~~-----------~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~i~~ 228 (305)
T 1tht_A 172 LGSEVFVRDCFE---------HHW--DT-----------LDSTLDKVANTSVPLIAFTANNDDWVKQEE-VYDMLAHIRT 228 (305)
T ss_dssp EEHHHHHHHHHH---------TTC--SS-----------HHHHHHHHTTCCSCEEEEEETTCTTSCHHH-HHHHHTTCTT
T ss_pred cCHHHHHHHHHh---------ccc--cc-----------hhhHHHHHhhcCCCEEEEEeCCCCccCHHH-HHHHHHhcCC
Confidence 000000000000 000 00 001224568899999999999999999997 88999876
Q ss_pred CCcEEEEEcCCCccccccChhhHHHHHhh---cccccccCCCCCCcccCCCChHhH
Q 005190 360 HKCEPRNFYGHGHFLLLEDGVDLVTIIKG---ASYYRRGRNHDYVSDFMPPTSSEF 412 (709)
Q Consensus 360 ~~~~~~~i~~aGH~~~le~p~~~~~~I~~---~~f~~r~~~~~~v~d~~~p~~~e~ 412 (709)
+++++++++++||.++ |+|+.+.+.+.+ |..--.....+.+.+++.|.-+.+
T Consensus 229 ~~~~l~~i~~agH~~~-e~p~~~~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (305)
T 1tht_A 229 GHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQL 283 (305)
T ss_dssp CCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHH
T ss_pred CCcEEEEeCCCCCchh-hCchHHHHHHHHHHHHHHHhCcccchhhhhhhccchHhh
Confidence 4789999999999996 899876555553 222123356778888888876555
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=213.32 Aligned_cols=209 Identities=11% Similarity=0.129 Sum_probs=152.9
Q ss_pred CCCEEEEeCCCCCC--cccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGV--GLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s--~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+.|+|||+||++++ ...|..+++.|. .||.|+++|+||||.| ++.++++|+.++++.+....+.++++|+
T Consensus 45 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 124 (270)
T 3pfb_A 45 IYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLV 124 (270)
T ss_dssp SEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred CCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCCCeEEEE
Confidence 47899999999988 556888999995 6899999999999998 5789999999999998877667799999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+|+.+|..+|+.++++|+++|...................+ .. ..... ...
T Consensus 125 G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~---------~~~- 182 (270)
T 3pfb_A 125 GHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNP--------DH----IPDRL---------PFK- 182 (270)
T ss_dssp EETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCT--------TS----CCSEE---------EET-
T ss_pred EeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCc--------cc----ccccc---------ccc-
Confidence 999999999999999999999999999865432211100000000000 00 00000 000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
............. .......+.++++|+|+++|++|.+++.+. .+.+.+.++
T Consensus 183 -------------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~ 234 (270)
T 3pfb_A 183 -------------------------DLTLGGFYLRIAQ--QLPIYEVSAQFTKPVCLIHGTDDTVVSPNA-SKKYDQIYQ 234 (270)
T ss_dssp -------------------------TEEEEHHHHHHHH--HCCHHHHHTTCCSCEEEEEETTCSSSCTHH-HHHHHHHCS
T ss_pred -------------------------ccccchhHhhccc--ccCHHHHHhhCCccEEEEEcCCCCCCCHHH-HHHHHHhCC
Confidence 0000000000000 011224567889999999999999999997 899999999
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++||+++.++++++.+.|.+|
T Consensus 235 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 263 (270)
T 3pfb_A 235 NSTLHLIEGADHCFSDSYQKNAVNLTTDF 263 (270)
T ss_dssp SEEEEEETTCCTTCCTHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCCcccCccchHHHHHHHHHH
Confidence 99999999999999999999999999954
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=202.29 Aligned_cols=210 Identities=13% Similarity=0.109 Sum_probs=152.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+.|+|||+||++++...|..+++.|+ +||+|+++|+||||.| +++++.+|+.++++.+... ..+++|+
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~l~ 98 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YAKVFVF 98 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CSEEEEE
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cCCeEEE
Confidence 46789999999999999999999996 7899999999999999 7888899999999998766 5789999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+++.+|.++|+.++++++++|..............+ ...+.......+ .
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-------------~ 154 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKY-----------AEYMNRLAGKSD-------------E 154 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHH-----------HHHHHHHHTCCC-------------C
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHH-----------HHHHHhhcccCc-------------c
Confidence 9999999999999999999999999988665432221111000 000100000000 0
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
........ ...+. .+..........+.++++|+|+++|++|.+++.+. .+.+.+.++
T Consensus 155 ~~~~~~~~------------------~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~ 211 (251)
T 3dkr_A 155 STQILAYL------------------PGQLA----AIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRL-AYQLRDALI 211 (251)
T ss_dssp HHHHHHHH------------------HHHHH----HHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTH-HHHHHHHCT
T ss_pred hhhHHhhh------------------HHHHH----HHHHHHHHHhccccccCCCEEEEecCCCcccChHH-HHHHHHHhc
Confidence 00000000 00000 00111112235678889999999999999999997 888888777
Q ss_pred C-c--EEEEEcCCCccccccC-hhhHHHHHhhc
Q 005190 361 K-C--EPRNFYGHGHFLLLED-GVDLVTIIKGA 389 (709)
Q Consensus 361 ~-~--~~~~i~~aGH~~~le~-p~~~~~~I~~~ 389 (709)
+ . ++++++++||+++.+. ++++.+.|.+|
T Consensus 212 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 244 (251)
T 3dkr_A 212 NAARVDFHWYDDAKHVITVNSAHHALEEDVIAF 244 (251)
T ss_dssp TCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCCcccccccchhHHHHHHHHH
Confidence 6 4 8999999999999986 99999999954
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=218.94 Aligned_cols=260 Identities=15% Similarity=0.127 Sum_probs=158.4
Q ss_pred ccccccCCCCCC-CCCEEEEeCCCCCCcc-------------cHHHHHH---Hh-cCCceEEEEeCCC--CCCC------
Q 005190 119 WFSPLECGSHTR-DSPLLLFLPGIDGVGL-------------GLIRQHQ---RL-GKIFDIWCLHIPV--KDRT------ 172 (709)
Q Consensus 119 ~~~~~~~g~p~~-~~p~Vv~lHG~~~s~~-------------~~~~~~~---~L-~~~~~Vi~~Dl~G--~G~S------ 172 (709)
.++|.+.|++.. ++|+|||+||++++.. .|..++. .| +++|+|+++|+|| ||.|
T Consensus 32 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~ 111 (366)
T 2pl5_A 32 VIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIH 111 (366)
T ss_dssp EEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBC
T ss_pred eeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCC
Confidence 455666665322 3689999999999988 7888774 44 6899999999999 7866
Q ss_pred --------------CHHHHHHHHHHHHHHhhccCCCCCE-EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhh
Q 005190 173 --------------SFTGLVKLVESTVRSESNRSPKRPV-YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237 (709)
Q Consensus 173 --------------s~~~~~~dl~~~l~~~~~~~~~~~v-~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~ 237 (709)
+++++++|+.+++++ .+.+++ +|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~dl~~~l~~----l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 187 (366)
T 2pl5_A 112 PETSTPYGSRFPFVSIQDMVKAQKLLVES----LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI 187 (366)
T ss_dssp TTTSSBCGGGSCCCCHHHHHHHHHHHHHH----TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH
T ss_pred CCCCccccCCCCcccHHHHHHHHHHHHHH----cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccc
Confidence 468888999998887 455788 8999999999999999999999999999999765432211
Q ss_pred hhhh---HHHhhchhhh-----------HHhHHHhhhhhcCchhhhHHHHHhhccCC------chHHHHHHHhHHHhhcc
Q 005190 238 QSTI---PLLELIPGQI-----------TTMLSSTLSLMTGDPLKMAMDNVAKRLSL------QPTIQDLSQDLVALSSY 297 (709)
Q Consensus 238 ~~~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 297 (709)
.... ..+...+... ...+...+..............+...... ...........
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 261 (366)
T 2pl5_A 188 AFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ------ 261 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST------
T ss_pred hhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHH------
Confidence 1000 0000000000 00000000000000000000000000000 00000000000
Q ss_pred hhhhhhcCChhhHHHHHHHHHHhh----hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC----CcEEEEE-c
Q 005190 298 LPVLADILPKETLLWKIELLKAAS----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNF-Y 368 (709)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~----~~~~~~i-~ 368 (709)
...+........+......+.... ......+.++++|+|+|+|++|.+++++. ++.+.+.++ +++++++ +
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 340 (366)
T 2pl5_A 262 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ-SREIVKSLEAADKRVFYVELQS 340 (366)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH-HHHHHHHHHHTTCCEEEEEECC
T ss_pred HHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHH-HHHHHHHhhhcccCeEEEEeCC
Confidence 000001112222222222222111 11234678899999999999999999996 899999888 8999999 8
Q ss_pred CCCccccccChhhHHHHHhhc
Q 005190 369 GHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 369 ~aGH~~~le~p~~~~~~I~~~ 389 (709)
++||++++|+|+++++.|.+|
T Consensus 341 ~~gH~~~~e~p~~~~~~i~~f 361 (366)
T 2pl5_A 341 GEGHDSFLLKNPKQIEILKGF 361 (366)
T ss_dssp CBSSGGGGSCCHHHHHHHHHH
T ss_pred CCCcchhhcChhHHHHHHHHH
Confidence 999999999999999999943
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=221.94 Aligned_cols=260 Identities=10% Similarity=0.051 Sum_probs=161.3
Q ss_pred ccccccCCCCC-CCCCEEEEeCCCCCCccc---HHHHHH---Hh-cCCceEEEEeCCC--CCCC----------------
Q 005190 119 WFSPLECGSHT-RDSPLLLFLPGIDGVGLG---LIRQHQ---RL-GKIFDIWCLHIPV--KDRT---------------- 172 (709)
Q Consensus 119 ~~~~~~~g~p~-~~~p~Vv~lHG~~~s~~~---~~~~~~---~L-~~~~~Vi~~Dl~G--~G~S---------------- 172 (709)
.++|...|..+ +++|+|||+||++++... |..++. .| +++|+|+++|+|| ||.|
T Consensus 95 ~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~ 174 (444)
T 2vat_A 95 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYG 174 (444)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCG
T ss_pred eEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccc
Confidence 45676666532 236799999999999998 888775 57 6899999999999 6876
Q ss_pred ------CHHHHHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh---H
Q 005190 173 ------SFTGLVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI---P 242 (709)
Q Consensus 173 ------s~~~~~~dl~~~l~~~~~~~~~~~-v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~---~ 242 (709)
+++++++|+.++++++ +.++ ++|+||||||++|+.+|.++|++|+++|++++............. .
T Consensus 175 ~~f~~~t~~~~a~dl~~ll~~l----~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 250 (444)
T 2vat_A 175 AKFPRTTIRDDVRIHRQVLDRL----GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQ 250 (444)
T ss_dssp GGCCCCCHHHHHHHHHHHHHHH----TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHhc----CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHH
Confidence 5678899999999883 4567 999999999999999999999999999999997654321110000 0
Q ss_pred HHhhchhhh------------HHhHHHhhhhhcCchhhhHHHHHhhccC-----------------------------Cc
Q 005190 243 LLELIPGQI------------TTMLSSTLSLMTGDPLKMAMDNVAKRLS-----------------------------LQ 281 (709)
Q Consensus 243 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~ 281 (709)
.+...+... ......................+..... ..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
T 2vat_A 251 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 330 (444)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCch
Confidence 000000000 0000000000000000000000000000 00
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhh------HhhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASA------YANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 355 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l 355 (709)
...+.+.... ...+........+......+...+. .....+.++++|+|+|+|++|.+++.+. ++.+
T Consensus 331 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~-~~~l 403 (444)
T 2vat_A 331 EAVSSYLRYQ------AQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDE-HVEM 403 (444)
T ss_dssp GGHHHHHHHH------HHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHH-HHHH
T ss_pred hhHHHHHHHH------HHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHH-HHHH
Confidence 0000000000 0011111222222222222221110 1345678899999999999999999996 9999
Q ss_pred HhhcCCcEEEEEc-CCCccccccChhhHHHHHhhc
Q 005190 356 SSALHKCEPRNFY-GHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 356 ~~~~~~~~~~~i~-~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.++++++++++ ++||++++|+|+++++.|.+|
T Consensus 404 ~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~f 438 (444)
T 2vat_A 404 GRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGF 438 (444)
T ss_dssp HHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHH
T ss_pred HHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHHH
Confidence 9999999999999 899999999999999999954
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=214.34 Aligned_cols=259 Identities=13% Similarity=0.080 Sum_probs=159.6
Q ss_pred ccccccCCCCCC-CCCEEEEeCCCCCCccc---------HHHHHH---Hh-cCCceEEEEeCCC-CCCC-----------
Q 005190 119 WFSPLECGSHTR-DSPLLLFLPGIDGVGLG---------LIRQHQ---RL-GKIFDIWCLHIPV-KDRT----------- 172 (709)
Q Consensus 119 ~~~~~~~g~p~~-~~p~Vv~lHG~~~s~~~---------~~~~~~---~L-~~~~~Vi~~Dl~G-~G~S----------- 172 (709)
.++|...|++++ ++|+|||+||++++... |..++. .| +++|+|+++|+|| ||.|
T Consensus 45 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g 124 (377)
T 2b61_A 45 NVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTG 124 (377)
T ss_dssp EEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTS
T ss_pred eEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCcccc
Confidence 456666665432 26899999999999998 888875 48 7899999999999 5755
Q ss_pred ----------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh-
Q 005190 173 ----------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST- 240 (709)
Q Consensus 173 ----------s~~~~~~dl~~~l~~~~~~~~~~~v~-LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~- 240 (709)
+++++++|+.++++. .+.++++ |+||||||.+|+.+|.++|++|+++|++++............
T Consensus 125 ~~~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 200 (377)
T 2b61_A 125 KPYGSQFPNIVVQDIVKVQKALLEH----LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNH 200 (377)
T ss_dssp SBCGGGCCCCCHHHHHHHHHHHHHH----TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHH
T ss_pred ccccccCCcccHHHHHHHHHHHHHH----cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHH
Confidence 357788888888877 5567887 999999999999999999999999999999755432111000
Q ss_pred --hHHHhhchhhh----------HHh--HHHhhhhh-cCchhhhHHHHHhhccC-------CchHHHHHHHhHHHhhcch
Q 005190 241 --IPLLELIPGQI----------TTM--LSSTLSLM-TGDPLKMAMDNVAKRLS-------LQPTIQDLSQDLVALSSYL 298 (709)
Q Consensus 241 --~~~~~~~~~~~----------~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 298 (709)
...+...+... ... ........ ...... ....+..... .............
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 273 (377)
T 2b61_A 201 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQ-LAKAFGRATKSDGSFWGDYFQVESYLSYQG------ 273 (377)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHH-HHHHTTTCBCTTCCTTSCCBHHHHHHHHHH------
T ss_pred HHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHH-HHHHhccccccccccccchHHHHHHHHhhh------
Confidence 00000000000 000 00000000 000000 0000000000 0001111111000
Q ss_pred hhhhhcCChhhHHHHHHHHHHhh-----hHhhhhcccCCccEEEEeeCCCCCCCc----HHHHHHHHhhcCCcEEEEEc-
Q 005190 299 PVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPS----QEEGERLSSALHKCEPRNFY- 368 (709)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvi~G~~D~~v~~----~~~~~~l~~~~~~~~~~~i~- 368 (709)
..+........+......+.... ......+.++++|+|+|+|++|.++++ +. .+.+.+.++++++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~l~~~~~~~~~~~i~~ 352 (377)
T 2b61_A 274 KKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKS-KQLLEQSGVDLHFYEFPS 352 (377)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHH-HHHHHHTTCEEEEEEECC
T ss_pred hhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHH-HHHHHhcCCCceEEEeCC
Confidence 00111122222222222222111 112456788999999999999999999 75 88899999999999999
Q ss_pred CCCccccccChhhHHHHHhhc
Q 005190 369 GHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 369 ~aGH~~~le~p~~~~~~I~~~ 389 (709)
++||++++|+|+++++.|.+|
T Consensus 353 ~~gH~~~~e~p~~~~~~i~~f 373 (377)
T 2b61_A 353 DYGHDAFLVDYDQFEKRIRDG 373 (377)
T ss_dssp TTGGGHHHHCHHHHHHHHHHH
T ss_pred CCCchhhhcCHHHHHHHHHHH
Confidence 999999999999999999944
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=206.42 Aligned_cols=219 Identities=16% Similarity=0.229 Sum_probs=148.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.+ +.++++|+|||
T Consensus 19 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~lvG~S 94 (267)
T 3fla_A 19 ARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPF----GDRPLALFGHS 94 (267)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGG----TTSCEEEEEET
T ss_pred CCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc----CCCceEEEEeC
Confidence 578999999999999999999999988899999999999988 7788899988888773 56789999999
Q ss_pred hhHHHHHHHHHhCCCc----eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 204 LGACIALAVAARNPDI----DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
|||.+|+.+|..+|+. +.++|++++.......... ...... ......+ ....... .....
T Consensus 95 ~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~-----~~~~~~--~~~~~~~-~~~~~~~----~~~~~---- 158 (267)
T 3fla_A 95 MGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDD-----VRGASD--ERLVAEL-RKLGGSD----AAMLA---- 158 (267)
T ss_dssp HHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSC-----TTCCCH--HHHHHHH-HHTCHHH----HHHHH----
T ss_pred hhHHHHHHHHHhhhhhccccccEEEECCCCccccccchh-----hcccch--HHHHHHH-HHhcCcc----hhhcc----
Confidence 9999999999999986 8999999876443221100 000000 0000000 0000000 00000
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
.......... .+........ .........+++|+|+++|++|.+++.+. .+.+.+..
T Consensus 159 ~~~~~~~~~~-------------------~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~ 215 (267)
T 3fla_A 159 DPELLAMVLP-------------------AIRSDYRAVE---TYRHEPGRRVDCPVTVFTGDHDPRVSVGE-ARAWEEHT 215 (267)
T ss_dssp SHHHHHHHHH-------------------HHHHHHHHHH---HCCCCTTCCBSSCEEEEEETTCTTCCHHH-HHGGGGGB
T ss_pred CHHHHHHHHH-------------------HHHHHHHhhh---cccccccCcCCCCEEEEecCCCCCCCHHH-HHHHHHhc
Confidence 0000000000 0000001111 11111225789999999999999999996 88999988
Q ss_pred CC-cEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 360 HK-CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 360 ~~-~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
++ ++++++++ ||+.++++|+++++.|.+ |+.+.
T Consensus 216 ~~~~~~~~~~g-gH~~~~~~~~~~~~~i~~--fl~~~ 249 (267)
T 3fla_A 216 TGPADLRVLPG-GHFFLVDQAAPMIATMTE--KLAGP 249 (267)
T ss_dssp SSCEEEEEESS-STTHHHHTHHHHHHHHHH--HTC--
T ss_pred CCCceEEEecC-CceeeccCHHHHHHHHHH--Hhccc
Confidence 87 99999998 999999999999999994 45433
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-22 Score=213.40 Aligned_cols=167 Identities=16% Similarity=0.157 Sum_probs=118.2
Q ss_pred CcccccccccchhhhhhHHHHHhhhhccccccccccCCC----CcHhhHHHH------HHHhh------cccCCCCCCcc
Q 005190 56 TPTRIFVEKKSSELVEDEAETKQRVNVREYSEEESEGNG----KSLKDYFDE------AEDMI------KSSSGGGPPRW 119 (709)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~------~~~~~g~~~~~ 119 (709)
.|++..+++...+.++.++...+.. +.. ...|+.|.. +.+.+|+.. .+..+ ....+|..
T Consensus 5 ~pf~i~~~~~~~~~l~~~l~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~w~~~~dwr~~e~~ln~~~~~~~~i~g~~--- 79 (388)
T 4i19_A 5 RPFQVQIPQADIDDLKRRLSETRWP-ELV-DVGWSRGAPLSYIKELAEYWRDGFDWRAAERRINQYPQFTTEIDGAT--- 79 (388)
T ss_dssp EEECCCCCHHHHHHHHHHHHTCCCC-CCC-CCTTTTSSCHHHHHHHHHHHHHTCCHHHHHHHHHTSCEEEEEETTEE---
T ss_pred eeeeeeCCHHHHHHHHHHHhcCCCC-CCC-CCchhcCCCHHHHHHHHHHHhhhcChhHHHHHhccCCcEEEEECCeE---
Confidence 4566677766667666666655444 222 224555544 112222211 11111 11114433
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC----------CceEEEEeCCCCCCC--------CHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK----------IFDIWCLHIPVKDRT--------SFTGLVKLV 181 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~----------~~~Vi~~Dl~G~G~S--------s~~~~~~dl 181 (709)
++|...+++.+++++|||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++++
T Consensus 80 i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~~~~~~~~a~~~ 159 (388)
T 4i19_A 80 IHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSAGWELGRIAMAW 159 (388)
T ss_dssp EEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSCCCCHHHHHHHH
T ss_pred EEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 34433332233577899999999999999999999976 899999999999988 678899999
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 182 ~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.++++. ++.++++++||||||.+++.+|.++|+.|+++|+++|...
T Consensus 160 ~~l~~~----lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 160 SKLMAS----LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp HHHHHH----TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred HHHHHH----cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 999987 5567899999999999999999999999999999987544
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=207.65 Aligned_cols=256 Identities=16% Similarity=0.121 Sum_probs=144.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|...|++ ++++|||+||++++...+ .+...+ .++|+|+++|+||||.| +++++++|+.+++++
T Consensus 26 ~l~~~~~g~~--~g~~vvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~- 101 (317)
T 1wm1_A 26 RIYWELSGNP--NGKPAVFIHGGPGGGISP-HHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREM- 101 (317)
T ss_dssp EEEEEEEECT--TSEEEEEECCTTTCCCCG-GGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHH-
T ss_pred EEEEEEcCCC--CCCcEEEECCCCCcccch-hhhhhccccCCeEEEECCCCCCCCCCCcccccccHHHHHHHHHHHHHH-
Confidence 3456666642 356799999997765322 223344 46899999999999998 357888999888887
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhH--HHhhchhhhHHhHHHhhhhhcCch
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP--LLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++........ ..... .....+. .+..+........
T Consensus 102 ---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 173 (317)
T 1wm1_A 102 ---AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRL-HWYYQDGASRFFPE----KWERVLSILSDDE 173 (317)
T ss_dssp ---TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHH-HHHHTSSGGGTSHH----HHHHHHTTSCTTG
T ss_pred ---cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhh-hHHhhccchhhcHH----HHHHHHhhccchh
Confidence 556789999999999999999999999999999998754322110 00000 0000000 0000000000000
Q ss_pred hhhHHHHHhh-ccCCchHHH-HHHHh---HHHh-hcch--hhhhhcCChhhHHHHHHHH-----HHh----hhH-hhhhc
Q 005190 267 LKMAMDNVAK-RLSLQPTIQ-DLSQD---LVAL-SSYL--PVLADILPKETLLWKIELL-----KAA----SAY-ANSRL 328 (709)
Q Consensus 267 ~~~~~~~~~~-~~~~~~~~~-~~~~~---~~~~-~~~~--~~~~~~~~~~~~~~~~~~~-----~~~----~~~-~~~~l 328 (709)
.......... ......... ..... .... .... ....+ +...........+ ... ... ....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (317)
T 1wm1_A 174 RKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESAS-FGEDDFALAFARIENHYFTHLGFLESDDQLLRNV 252 (317)
T ss_dssp GGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGG-GGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTG
T ss_pred hcchHHHHHhhhcCCCccccccccccccccccchhhccCCccccc-ccccchhhhHHHhhhhhhhcccccccchhhHhhc
Confidence 0000000000 000000000 00000 0000 0000 00000 0000000000000 000 001 23456
Q ss_pred ccCC-ccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCcccccc-ChhhHHHHHhh
Q 005190 329 HAVK-AQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE-DGVDLVTIIKG 388 (709)
Q Consensus 329 ~~i~-~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le-~p~~~~~~I~~ 388 (709)
.+++ +|+|+|+|++|.+++++. ++.+++.+|++++++++++||+++.+ .++++.+.|.+
T Consensus 253 ~~i~~~P~lii~G~~D~~~~~~~-~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~ 313 (317)
T 1wm1_A 253 PLIRHIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDR 313 (317)
T ss_dssp GGGTTSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEecCCCCCCHHH-HHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHHH
Confidence 6785 999999999999999996 88999999999999999999999765 57888888884
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=229.43 Aligned_cols=251 Identities=14% Similarity=0.123 Sum_probs=159.1
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~ 189 (709)
++|...|+ +|+|||+||++++...|..+++.|+ +||+|+++|+||||.| +++++++|+.++++++
T Consensus 250 l~~~~~g~----~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l- 324 (555)
T 3i28_A 250 LHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL- 324 (555)
T ss_dssp EEEEEECS----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH-
T ss_pred EEEEEcCC----CCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc-
Confidence 34555554 7899999999999999999999996 5799999999999998 4688899999999884
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhh----------chhh----hHHhH
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL----------IPGQ----ITTML 255 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~----------~~~~----~~~~~ 255 (709)
+.++++|+||||||.+|+.+|.++|++++++|++++.................. .+.. .....
T Consensus 325 ---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (555)
T 3i28_A 325 ---GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNL 401 (555)
T ss_dssp ---TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCH
T ss_pred ---CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhH
Confidence 456899999999999999999999999999999988654332221111100000 0000 00000
Q ss_pred HHhhhhhcCchhh----h-HHHHH------------hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH
Q 005190 256 SSTLSLMTGDPLK----M-AMDNV------------AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK 318 (709)
Q Consensus 256 ~~~~~~~~~~~~~----~-~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (709)
...+......... . ..... ............+..... ..-......+......
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 471 (555)
T 3i28_A 402 SRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFK----------KSGFRGPLNWYRNMER 471 (555)
T ss_dssp HHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHT----------TTTTHHHHHTTSCHHH
T ss_pred HHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHh----------cccchhHHHHHHhccc
Confidence 0011100000000 0 00000 000000000111110000 0000001111111111
Q ss_pred HhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 319 AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 319 ~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.........+.++++|+|+|+|++|.+++++. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 472 ~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 541 (555)
T 3i28_A 472 NWKWACKSLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKW 541 (555)
T ss_dssp HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred cchhhccccccccccCEEEEEeCCCCCcCHHH-HHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHHHHHH
Confidence 11122335667899999999999999999997 88999999999999999999999999999999999954
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=223.86 Aligned_cols=243 Identities=10% Similarity=0.045 Sum_probs=158.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
.++|...|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.++++++
T Consensus 15 ~l~y~~~G~----gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l-- 88 (456)
T 3vdx_A 15 DLYYEDHGT----GVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL-- 88 (456)
T ss_dssp EEEEEEESS----SEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH--
T ss_pred EEEEEEeCC----CCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Confidence 445666664 689999999999999999999999 68999999999999999 6799999999999984
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCCCcchhhhhh-----hhHHHhhchhhh----HHhHHHhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQS-----TIPLLELIPGQI----TTMLSSTLS 260 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~ 260 (709)
+.++++|+||||||.+++.+|+.+ |+.++++|++++........... .......+.... .......+.
T Consensus 89 --~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (456)
T 3vdx_A 89 --DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN 166 (456)
T ss_dssp --TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred --CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHHH
Confidence 456899999999999999999887 99999999999866432211100 000011000000 000000000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
....... .................... . ... ................+.++++|+|+|+|
T Consensus 167 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~----------~-~~~---~~~~~~~~~~~d~~~~l~~i~~PvLiI~G 226 (456)
T 3vdx_A 167 DFYNLDE------NLGTRISEEAVRNSWNTAAS----------G-GFF---AAAAAPTTWYTDFRADIPRIDVPALILHG 226 (456)
T ss_dssp HHTTTTT------SBTTTBCHHHHHHHHHHHHT----------S-CTT---HHHHGGGGTTCCCTTTSTTCCSCCEEEEE
T ss_pred HHhcccc------cccccccHHHHHHHhhhccc----------c-chh---hhhhhhhhhhhhHHHHhhhCCCCEEEEEe
Confidence 0000000 00000000111111100000 0 000 00000000111223567889999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++|.+++.+...+.+.+..+++++++++++||++++++|+++++.|.+|
T Consensus 227 ~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~~F 275 (456)
T 3vdx_A 227 TGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAF 275 (456)
T ss_dssp TTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHHHH
Confidence 9999999983378888899999999999999999999999999999955
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-22 Score=205.37 Aligned_cols=106 Identities=20% Similarity=0.148 Sum_probs=84.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|...|++ ++++|||+||++++...+ .+...+ .++|+|+++|+||||.| +++++++|+.+++++
T Consensus 23 ~l~y~~~G~~--~g~pvvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~- 98 (313)
T 1azw_A 23 TLYFEQCGNP--HGKPVVMLHGGPGGGCND-KMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTH- 98 (313)
T ss_dssp EEEEEEEECT--TSEEEEEECSTTTTCCCG-GGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHH-
T ss_pred EEEEEecCCC--CCCeEEEECCCCCccccH-HHHHhcCcCcceEEEECCCCCcCCCCCcccccccHHHHHHHHHHHHHH-
Confidence 3456666642 456799999987765332 233444 47899999999999998 457889999999887
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
++.++++|+||||||.+|+.+|.++|++|+++|++++...
T Consensus 99 ---l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~ 138 (313)
T 1azw_A 99 ---LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLL 138 (313)
T ss_dssp ---TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred ---hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccC
Confidence 5567899999999999999999999999999999987543
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=213.42 Aligned_cols=169 Identities=10% Similarity=0.065 Sum_probs=117.6
Q ss_pred ccCCCcccccccccchhhhhhHHHHHhhhhccccc--cccccCCC----CcHhhHHHH------HHHhhc------ccCC
Q 005190 52 MTETTPTRIFVEKKSSELVEDEAETKQRVNVREYS--EEESEGNG----KSLKDYFDE------AEDMIK------SSSG 113 (709)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~------~~~~~~------~~~~ 113 (709)
..+..|++..+++...+.++.+++..+...+..+. ..|+.|.. +.+.+|+.. .+..+. ...+
T Consensus 14 ~~~~~pf~i~~~~~~l~~l~~~l~~~r~~~~~~~~~~~~~~~G~~~~~~~~l~~~w~~~~dwr~~e~~ln~~~~~~~~i~ 93 (408)
T 3g02_A 14 SISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLNSFPQFTTEIE 93 (408)
T ss_dssp CSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHTTSCEEEEEET
T ss_pred CCCCeeeeeeCCHHHHHHHHHHHHccCCCCccccCCCcccccCCCHHHHHHHHHHHhhhcChHHHHHHHhcCCCEEEEEC
Confidence 33456888888888888888887775544333221 13555544 222333321 111111 0113
Q ss_pred CCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC-------CceEEEEeCCCCCCC---------CHHHH
Q 005190 114 GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-------IFDIWCLHIPVKDRT---------SFTGL 177 (709)
Q Consensus 114 g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~-------~~~Vi~~Dl~G~G~S---------s~~~~ 177 (709)
|. -++|...+++.+++++|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++
T Consensus 94 g~---~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~~~~~~ 170 (408)
T 3g02_A 94 GL---TIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDN 170 (408)
T ss_dssp TE---EEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCCCHHHH
T ss_pred CE---EEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCCCHHHH
Confidence 32 345555554344678899999999999999999999964 689999999999988 56889
Q ss_pred HHHHHHHHHHhhccCCCC-CEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 005190 178 VKLVESTVRSESNRSPKR-PVYLVGESLGACIALAVAARNPDIDLVLILVN 227 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~~~~-~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~ 227 (709)
++++.++++. ++.+ +++++||||||.+++.+|.++|+.+..++.++
T Consensus 171 a~~~~~l~~~----lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~ 217 (408)
T 3g02_A 171 ARVVDQLMKD----LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFC 217 (408)
T ss_dssp HHHHHHHHHH----TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred HHHHHHHHHH----hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCC
Confidence 9999999987 5555 89999999999999999999977554444333
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-22 Score=200.86 Aligned_cols=214 Identities=15% Similarity=0.183 Sum_probs=151.6
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+|+|||+||++++...|..+++.|. .+|.|+++|+||||.| +++++++|+.++++.+... ..+++|+|||
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i~l~G~S 117 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTIFVTGLS 117 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEEEEEEET
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcEEEEEEc
Confidence 6899999999999999999999996 5899999999999999 7899999999999997665 6789999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
+||.+|+.+|..+|+ ++++|+++|.......... ..... ....++....... .....
T Consensus 118 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~------------~~~~~ 174 (270)
T 3rm3_A 118 MGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAG-----MTGGG-----ELPRYLDSIGSDL------------KNPDV 174 (270)
T ss_dssp HHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHH-----SCC--------CCSEEECCCCCC------------SCTTC
T ss_pred HhHHHHHHHHHhCCC-ccEEEEEcceecccccccc-----hhcch-----hHHHHHHHhCccc------------cccch
Confidence 999999999999999 9999999986654221110 00000 0000000000000 00000
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc-
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC- 362 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~- 362 (709)
....+ ...+...+....... ......+.++++|+|+++|++|.+++.+. .+.+.+.+++.
T Consensus 175 ~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~ 235 (270)
T 3rm3_A 175 KELAY--------------EKTPTASLLQLARLM----AQTKAKLDRIVCPALIFVSDEDHVVPPGN-ADIIFQGISSTE 235 (270)
T ss_dssp CCCCC--------------SEEEHHHHHHHHHHH----HHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHSCCSS
T ss_pred Hhhcc--------------cccChhHHHHHHHHH----HHHHhhhhhcCCCEEEEECCCCcccCHHH-HHHHHHhcCCCc
Confidence 00000 000111111111111 12235578889999999999999999997 89999988866
Q ss_pred -EEEEEcCCCccccccCh-hhHHHHHhhc
Q 005190 363 -EPRNFYGHGHFLLLEDG-VDLVTIIKGA 389 (709)
Q Consensus 363 -~~~~i~~aGH~~~le~p-~~~~~~I~~~ 389 (709)
++++++++||+++.+.+ +++.+.|.+|
T Consensus 236 ~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 264 (270)
T 3rm3_A 236 KEIVRLRNSYHVATLDYDQPMIIERSLEF 264 (270)
T ss_dssp EEEEEESSCCSCGGGSTTHHHHHHHHHHH
T ss_pred ceEEEeCCCCcccccCccHHHHHHHHHHH
Confidence 99999999999999987 8899988854
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=219.78 Aligned_cols=255 Identities=14% Similarity=0.114 Sum_probs=151.7
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc---C--Cc---eEEEEeCCCCCCC------------CHHHHHHHHHHHHHHhhcc
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG---K--IF---DIWCLHIPVKDRT------------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~---~--~~---~Vi~~Dl~G~G~S------------s~~~~~~dl~~~l~~~~~~ 191 (709)
.|+|||+||++++...|..+++.|+ . || +|+++|+||||.| ++.++++|+.++++.....
T Consensus 52 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~ 131 (398)
T 2y6u_A 52 RLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGS 131 (398)
T ss_dssp EEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhccc
Confidence 3689999999999999999999997 2 67 9999999999976 5678899999999875432
Q ss_pred CCCC--CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhh---hhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 192 SPKR--PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL---QSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 192 ~~~~--~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
.+.. +++|+||||||.+|+.+|..+|++|+++|+++|......... .................+...........
T Consensus 132 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (398)
T 2y6u_A 132 IDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANE 211 (398)
T ss_dssp STTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSH
T ss_pred ccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccccccccccccccccchhhHHHhhhhccccCCCH
Confidence 2223 499999999999999999999999999999998765421000 00000000000000000000000000000
Q ss_pred hhhHHHHHhh----ccCCchHHHHHHHhHHHhhc-----chhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEE
Q 005190 267 LKMAMDNVAK----RLSLQPTIQDLSQDLVALSS-----YLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLV 337 (709)
Q Consensus 267 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 337 (709)
......+.. ..........+... ..... ....+...............+..........+.++++|+|+
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 289 (398)
T 2y6u_A 212 -SEYVKYMRNGSFFTNAHSQILQNIIDF-ERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIH 289 (398)
T ss_dssp -HHHHHHHHHTSTTTTSCHHHHHHHHHH-HEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEE
T ss_pred -HHHHHHhhcCcccccCCHHHHHHHHHh-cCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEE
Confidence 000000000 00000111111100 00000 00000000000000000000000011223567889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 338 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|+|++|.+++++. ++.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 290 i~G~~D~~~~~~~-~~~l~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 340 (398)
T 2y6u_A 290 IVGARSNWCPPQN-QLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERINHH 340 (398)
T ss_dssp EEETTCCSSCHHH-HHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred EEcCCCCCCCHHH-HHHHHHhCCCceEEEeCCCCccchhcCHHHHHHHHHHH
Confidence 9999999999997 89999999999999999999999999999999999965
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=209.47 Aligned_cols=229 Identities=10% Similarity=0.016 Sum_probs=143.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC---CceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
++++|||+||++++...|..+.+.|++ +|+|+++|+||||.| +.+++++++.++++. . .++++|+|
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~l~~~~~~----~-~~~~~lvG 109 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAK----A-PQGVHLIC 109 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHH----C-TTCEEEEE
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHHHHHHHHHHHHHHHhhc----C-CCcEEEEE
Confidence 467899999999999999999999964 799999999999998 345556666666554 4 57899999
Q ss_pred echhHHHHHHHHHhCCC-ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 202 ESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
|||||.+|+.+|.++|+ +|+++|++++............ ............... ........ .........
T Consensus 110 hS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~ 181 (302)
T 1pja_A 110 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL---KWLFPTSMRSNLYRI----CYSPWGQE-FSICNYWHD 181 (302)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHH---HHHCTTCCHHHHHHH----HTSTTGGG-STGGGGBCC
T ss_pred ECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhh---hhHHHHHHHHHHhhc----cchHHHHH-hhhhhcccC
Confidence 99999999999999999 7999999998654322110000 001111000000000 00000000 000000000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
......... .......+....... ......+.+.+++ |+++|+|++|.+++++. ++.+.+..+
T Consensus 182 ~~~~~~~~~----~~~~~~~~~~~~~~~-----------~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~-~~~~~~~~~ 244 (302)
T 1pja_A 182 PHHDDLYLN----ASSFLALINGERDHP-----------NATVWRKNFLRVG-HLVLIGGPDDGVITPWQ-SSFFGFYDA 244 (302)
T ss_dssp TTCHHHHHH----HCSSHHHHTTSSCCT-----------THHHHHHHHTTCS-EEEEEECTTCSSSSSGG-GGGTCEECT
T ss_pred hhhhhhhhc----cchHHHHhhcCCccc-----------cchhHHHHHhccC-cEEEEEeCCCCccchhH-hhHhhhcCC
Confidence 000000000 000000000000000 0011235678899 99999999999999986 777766666
Q ss_pred C---------------------------cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 K---------------------------CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~---------------------------~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+ +++++++++||+++.|+|+++++.|.+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 300 (302)
T 1pja_A 245 NETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPW 300 (302)
T ss_dssp TCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGG
T ss_pred cccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHh
Confidence 5 9999999999999999999999999954
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=209.20 Aligned_cols=232 Identities=11% Similarity=0.078 Sum_probs=144.8
Q ss_pred CCCEEEEeCCC--CCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
++|+|||+||+ +++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++ .+.++++|+
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~lv 115 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAILMIFEH----FKFQSYLLC 115 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHH----SCCSEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccHHHHHHHHHHHHHH----hCCCCeEEE
Confidence 46899999954 6667899999999999999999999999998 579999999999988 456789999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchh--hhh----hhhHHHhhchhhhH-H-hHHHhhhhhcCchhhhHHH
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKS--VLQ----STIPLLELIPGQIT-T-MLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~--~~~----~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 272 (709)
||||||.+|+.+|.++|++|+++|+++|....... ... .............. . ...............
T Consensus 116 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 191 (292)
T 3l80_A 116 VHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQF---- 191 (292)
T ss_dssp EETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHH----
T ss_pred EEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHH----
Confidence 99999999999999999999999999975431110 000 00000000000000 0 000000000000000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
............ .+.....-..... . .........+.+.. ++|+|+|+|++|..++++ .
T Consensus 192 ---------~~~~~~~~~~~~------~~~~~~~l~~~~~-~--~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~--~ 250 (292)
T 3l80_A 192 ---------KQLWRGYDYCQR------QLNDVQSLPDFKI-R--LALGEEDFKTGISE-KIPSIVFSESFREKEYLE--S 250 (292)
T ss_dssp ---------HHHHHHHHHHHH------HHHTTTTSTTCCS-S--CCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT--S
T ss_pred ---------HHhHHHHHHHHH------HHHhhhhccccch-h--hhhcchhhhhccCC-CCCEEEEEccCccccchH--H
Confidence 000000000000 0000000000000 0 00000111134556 899999999999998877 4
Q ss_pred HHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 353 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 353 ~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
.+.+.+++.+ ++++++||++++|+|+++++.|. .|+++.
T Consensus 251 -~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~--~fl~~~ 289 (292)
T 3l80_A 251 -EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVE--QLLSNH 289 (292)
T ss_dssp -TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHH--HHHHTC
T ss_pred -HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHH--HHHHhc
Confidence 7777888999 99999999999999999999999 455543
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-21 Score=187.14 Aligned_cols=169 Identities=15% Similarity=0.253 Sum_probs=145.1
Q ss_pred cccCCCCCCCCCEEEEeCCCCCCcccHHH--HHHHhc-CCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005190 122 PLECGSHTRDSPLLLFLPGIDGVGLGLIR--QHQRLG-KIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (709)
Q Consensus 122 ~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~--~~~~L~-~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~ 187 (709)
|...| ++|+||++||++++...|.. +.+.|+ +||.|+++|+||+|.| +.+++++++..+++.
T Consensus 21 ~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (207)
T 3bdi_A 21 MVTDS----NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKA 96 (207)
T ss_dssp ECCTT----CCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTTCCHHHHHHHHHHHHHH
T ss_pred EeccC----CCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCcchHHHHHHHHHHHHHH
Confidence 55444 37799999999999999999 999995 5699999999999998 678888888888877
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+.++++++|||+||.+++.+|..+|+.++++|+++|..... +
T Consensus 97 ----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------~------------------------ 139 (207)
T 3bdi_A 97 ----NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES---------L------------------------ 139 (207)
T ss_dssp ----TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG---------G------------------------
T ss_pred ----cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc---------h------------------------
Confidence 455789999999999999999999999999999999852210 0
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 347 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~ 347 (709)
...+.++++|+++++|++|.+++
T Consensus 140 ---------------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~ 162 (207)
T 3bdi_A 140 ---------------------------------------------------------KGDMKKIRQKTLLVWGSKDHVVP 162 (207)
T ss_dssp ---------------------------------------------------------HHHHTTCCSCEEEEEETTCTTTT
T ss_pred ---------------------------------------------------------hHHHhhccCCEEEEEECCCCccc
Confidence 01235678999999999999999
Q ss_pred cHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 348 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+. .+.+.+.++++++++++++||+.+.++++++.+.|.+|
T Consensus 163 ~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 203 (207)
T 3bdi_A 163 IAL-SKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDF 203 (207)
T ss_dssp HHH-HHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred hHH-HHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 997 89999999999999999999999999999999999854
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-24 Score=219.33 Aligned_cols=248 Identities=14% Similarity=0.096 Sum_probs=150.2
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------------CHHHHHHHHHHHHHH
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVRS 187 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------------s~~~~~~dl~~~l~~ 187 (709)
++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 17 ~~~~~~g~----~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~ 92 (304)
T 3b12_A 17 INCVVGGS----GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRT 92 (304)
Confidence 44555554 67899999999999999999999999999999999999988 335677788888877
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh---HHH----hhchhhhHHhHHHhhh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI---PLL----ELIPGQITTMLSSTLS 260 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~ 260 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++............. ... ...+.... .....
T Consensus 93 ----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 165 (304)
T 3b12_A 93 ----LGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYP---EKVIG 165 (304)
Confidence 44568999999999999999999999999999999986543221110000 000 00000000 00000
Q ss_pred hhcCchhhh-HHHHHhh--ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-----hhHhhhhcccCC
Q 005190 261 LMTGDPLKM-AMDNVAK--RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-----SAYANSRLHAVK 332 (709)
Q Consensus 261 ~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~ 332 (709)
......... ....... .....+.......... ............... .......+.+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (304)
T 3b12_A 166 ADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWR-------------DPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQ 232 (304)
Confidence 000000000 0000000 0000000000000000 000000000111000 001111267899
Q ss_pred ccEEEEeeCCCCCC-CcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 333 AQMLVLCSGKDQLM-PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 333 ~PvLvi~G~~D~~v-~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
+|+|+|+|++|..+ +... .+.+.+..++++++++ ++||++++|+|+++++.|. .|+++.
T Consensus 233 ~P~lii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~--~fl~~~ 292 (304)
T 3b12_A 233 CPALVFSGSAGLMHSLFEM-QVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILR--EFLSDA 292 (304)
Confidence 99999999999655 5554 7788888889999999 9999999999999999999 555443
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=209.12 Aligned_cols=246 Identities=14% Similarity=0.122 Sum_probs=150.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHH------Hhc-CCceEEEEeCCCCCCC----------------CHHHHHH-HHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQ------RLG-KIFDIWCLHIPVKDRT----------------SFTGLVK-LVESTVR 186 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~------~L~-~~~~Vi~~Dl~G~G~S----------------s~~~~~~-dl~~~l~ 186 (709)
++|+|||+||++++...|..+.. .|+ +||+|+++|+||||.| +++++++ |+.++++
T Consensus 57 ~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 136 (377)
T 1k8q_A 57 RRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATID 136 (377)
T ss_dssp TCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHH
T ss_pred CCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHH
Confidence 57899999999999998876544 775 5799999999999987 3457888 9989888
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCCCcchhhhhhhhHHHhhchhh-hHH---------
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQ-ITT--------- 253 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~-~~~--------- 253 (709)
.+....+.++++|+||||||.+|+.+|..+|+ +++++|+++|......... .. ..+...... ...
T Consensus 137 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 214 (377)
T 1k8q_A 137 FILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTET-LI-NKLMLVPSFLFKLIFGNKIFYP 214 (377)
T ss_dssp HHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCS-GG-GGGGTSCHHHHHHHSCSSEESC
T ss_pred HHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccchh-HH-HHHHhhccHHHHhhcCccccCc
Confidence 87766667899999999999999999999998 8999999998654322110 00 000000000 000
Q ss_pred ---hHHHhhhhhcCch----hhhHHHHHhhcc----CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh--
Q 005190 254 ---MLSSTLSLMTGDP----LKMAMDNVAKRL----SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-- 320 (709)
Q Consensus 254 ---~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 320 (709)
............. ............ ........+... .........+..........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
T 1k8q_A 215 HHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSH----------NPAGTSVQNVLHWSQAVKSGKF 284 (377)
T ss_dssp CCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTT----------CCCCEEHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhcc----------CCCCccHHHHHHHHHHHhcCCe
Confidence 0000000000000 000000000000 000000000000 00000000111111111100
Q ss_pred ---------------h--hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcE-EEEEcCCCccccc---cCh
Q 005190 321 ---------------S--AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE-PRNFYGHGHFLLL---EDG 379 (709)
Q Consensus 321 ---------------~--~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~-~~~i~~aGH~~~l---e~p 379 (709)
. ......+.++++|+|+|+|++|.+++++. ++.+.+.+++++ +++++++||+.++ ++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 363 (377)
T 1k8q_A 285 QAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD-VDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAP 363 (377)
T ss_dssp BCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHH-HHHHHTTCTTEEEEEEETTCCTTHHHHCTTHH
T ss_pred eeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHH-HHHHHHhCcCcccEEecCCCCceEEEecCCcH
Confidence 0 00012378899999999999999999997 999999999988 9999999999997 899
Q ss_pred hhHHHHHhhc
Q 005190 380 VDLVTIIKGA 389 (709)
Q Consensus 380 ~~~~~~I~~~ 389 (709)
+++.+.|.+|
T Consensus 364 ~~~~~~i~~f 373 (377)
T 1k8q_A 364 QAVYNEIVSM 373 (377)
T ss_dssp HHTHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999854
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.3e-22 Score=201.79 Aligned_cols=215 Identities=14% Similarity=0.120 Sum_probs=142.8
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~ 204 (709)
+|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.+. +..+++|+||||
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~---~~~~~~lvG~S~ 127 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHR---LTHDYALFGHSM 127 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT---CSSSEEEEEETH
T ss_pred CceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeCH
Confidence 37899999999999999999999988999999999999987 78999999999988732 467899999999
Q ss_pred hHHHHHHHHHhCCCcee----EEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 205 GACIALAVAARNPDIDL----VLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 205 GG~iAl~~A~~~P~~v~----~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||.+|+.+|.++|+.+. +++++++........... ..... .... ..+.......
T Consensus 128 Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~-----~~~~~--~~~~-~~~~~~~~~~-------------- 185 (280)
T 3qmv_A 128 GALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRAD-----HTLSD--TALR-EVIRDLGGLD-------------- 185 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCG-----GGSCH--HHHH-HHHHHHTCCC--------------
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccc-----cccCH--HHHH-HHHHHhCCCC--------------
Confidence 99999999999998876 788877644321111000 00000 0000 0000000000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
.. ...+.. +... ....+....... .......+..+++|+|+|+|++|.+++.+. .+.+.+..+
T Consensus 186 ~~----~~~~~~--------~~~~-~~~~~~~~~~~~---~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~-~~~~~~~~~ 248 (280)
T 3qmv_A 186 DA----DTLGAA--------YFDR-RLPVLRADLRAC---ERYDWHPRPPLDCPTTAFSAAADPIATPEM-VEAWRPYTT 248 (280)
T ss_dssp ---------------------CCT-THHHHHHHHHHH---HTCCCCCCCCBCSCEEEEEEEECSSSCHHH-HHTTGGGBS
T ss_pred hh----hhcCHH--------HHHH-HHHHHHHHHHHH---HhccccCCCceecCeEEEEecCCCCcChHH-HHHHHHhcC
Confidence 00 000000 0000 000011011111 111112356789999999999999999987 888888888
Q ss_pred C-cEEEEEcCCCccccc--cChhhHHHHHhhc
Q 005190 361 K-CEPRNFYGHGHFLLL--EDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~-~~~~~i~~aGH~~~l--e~p~~~~~~I~~~ 389 (709)
+ .++++++ +||+.++ ++|+++++.|.++
T Consensus 249 ~~~~~~~~~-ggH~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 249 GSFLRRHLP-GNHFFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp SCEEEEEEE-EETTGGGSSHHHHHHHHHHHTT
T ss_pred CceEEEEec-CCCeEEcCchhHHHHHHHHHhh
Confidence 7 4666666 5999999 8999999999854
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=195.25 Aligned_cols=211 Identities=15% Similarity=0.092 Sum_probs=145.2
Q ss_pred CCCEEEEeCCCCCCcccHHH--HHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIR--QHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~--~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
++|+|||+||++++...|.. +...+ ..+|+|+++|+||||.| +++++++|+.++++++. .++++|+
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~----~~~~~l~ 111 (270)
T 3llc_A 36 ERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFK----PEKAILV 111 (270)
T ss_dssp TSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC----CSEEEEE
T ss_pred CCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccHHHHHHHHHHHHHHhc----cCCeEEE
Confidence 47899999999998766544 66777 57999999999999998 77899999999999853 5789999
Q ss_pred EechhHHHHHHHHHh---CC---CceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHH
Q 005190 201 GESLGACIALAVAAR---NP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (709)
Q Consensus 201 GhS~GG~iAl~~A~~---~P---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (709)
|||+||.+|+.+|.+ +| +.++++|+++|......... ...+.......+...........
T Consensus 112 G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------- 177 (270)
T 3llc_A 112 GSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI------EPLLGDRERAELAENGYFEEVSE-------- 177 (270)
T ss_dssp EETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT------GGGCCHHHHHHHHHHSEEEECCT--------
T ss_pred EeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh------hhhhhhhhhhhhhccCcccChhh--------
Confidence 999999999999999 99 99999999998655322110 00001000000000000000000
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~ 354 (709)
... ............. ........+.++++|+++++|++|.+++.+. .+.
T Consensus 178 ---~~~------------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~-~~~ 227 (270)
T 3llc_A 178 ---YSP------------------------EPNIFTRALMEDG--RANRVMAGMIDTGCPVHILQGMADPDVPYQH-ALK 227 (270)
T ss_dssp ---TCS------------------------SCEEEEHHHHHHH--HHTCCTTSCCCCCSCEEEEEETTCSSSCHHH-HHH
T ss_pred ---ccc------------------------chhHHHHHHHhhh--hhhhhhhhhhcCCCCEEEEecCCCCCCCHHH-HHH
Confidence 000 0000000000000 0111234567889999999999999999997 999
Q ss_pred HHhhcCC--cEEEEEcCCCcccc-ccChhhHHHHHhhc
Q 005190 355 LSSALHK--CEPRNFYGHGHFLL-LEDGVDLVTIIKGA 389 (709)
Q Consensus 355 l~~~~~~--~~~~~i~~aGH~~~-le~p~~~~~~I~~~ 389 (709)
+.+.+++ +++++++++||++. .+.++++.+.|.+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 265 (270)
T 3llc_A 228 LVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAM 265 (270)
T ss_dssp HHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHH
Confidence 9999888 99999999999655 46788888888854
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-20 Score=189.01 Aligned_cols=234 Identities=12% Similarity=0.129 Sum_probs=148.6
Q ss_pred CCCEEEEeCCCC---CCcccHH-HHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005190 131 DSPLLLFLPGID---GVGLGLI-RQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~-~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG 206 (709)
..|+|||+||++ ++...|. .+.+.|++.|.|+++|+||+|.+++....+|+.++++.+....+..+++|+||||||
T Consensus 28 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg 107 (275)
T 3h04_A 28 TKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGA 107 (275)
T ss_dssp CSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHTTTTSCEEEEEETHHH
T ss_pred CCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCccccchhHHHHHHHHHHHHhhCCCCCEEEEEecHHH
Confidence 477899999988 6666554 778888766999999999999999999999999999998888778899999999999
Q ss_pred HHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHH
Q 005190 207 CIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQD 286 (709)
Q Consensus 207 ~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (709)
.+|+.+|.+ +.++++|+++|...................+.... ......+...... ... .. .....
T Consensus 108 ~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~~-~~-~~~~~ 174 (275)
T 3h04_A 108 YLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSIN---ETMIAQLTSPTPV------VQD-QI-AQRFL 174 (275)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTSC---HHHHHTTSCSSCC------SSC-SS-GGGHH
T ss_pred HHHHHHhcc--CCccEEEeccccccccccccccccchhhcccccch---HHHHhcccCCCCc------CCC-cc-ccchh
Confidence 999999999 88999999999776533222111111111111000 0000000000000 000 00 00000
Q ss_pred HHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEE
Q 005190 287 LSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRN 366 (709)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~ 366 (709)
..............+... . .. . .........+.+++ |+|+++|++|.+++.+. ++.+.+.++++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~-~-~~-------~-~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~ 242 (275)
T 3h04_A 175 IYVYARGTGKWINMINIA-D-YT-------D-SKYNIAPDELKTLP-PVFIAHCNGDYDVPVEE-SEHIMNHVPHSTFER 242 (275)
T ss_dssp HHHHHHHHTCHHHHHCCS-C-TT-------S-GGGSCCHHHHTTCC-CEEEEEETTCSSSCTHH-HHHHHTTCSSEEEEE
T ss_pred hhhhhhhcCchHHhhccc-c-cc-------c-cccccccchhccCC-CEEEEecCCCCCCChHH-HHHHHHhcCCceEEE
Confidence 000000000000000000 0 00 0 00000112346677 99999999999999997 999999999999999
Q ss_pred EcCCCccccccCh---hhHHHHHhhc
Q 005190 367 FYGHGHFLLLEDG---VDLVTIIKGA 389 (709)
Q Consensus 367 i~~aGH~~~le~p---~~~~~~I~~~ 389 (709)
++++||.++.+.+ +++.+.+.+|
T Consensus 243 ~~~~~H~~~~~~~~~~~~~~~~i~~f 268 (275)
T 3h04_A 243 VNKNEHDFDRRPNDEAITIYRKVVDF 268 (275)
T ss_dssp ECSSCSCTTSSCCHHHHHHHHHHHHH
T ss_pred eCCCCCCcccCCchhHHHHHHHHHHH
Confidence 9999999999998 4777777744
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=197.42 Aligned_cols=101 Identities=11% Similarity=0.021 Sum_probs=87.6
Q ss_pred CCCEEEEeCCCCCCccc---HHHHHHHhcCCceEEEEe----CCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGIDGVGLG---LIRQHQRLGKIFDIWCLH----IPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~---~~~~~~~L~~~~~Vi~~D----l~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
++|+|||+||++++... |..+++.|+++|+|+++| +||||.|+..+.++|+.++++.+....+..+++|+|||
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~~~~~d~~~~~~~l~~~l~~~~~~LvGhS 116 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDAEDVDDLIGILLRDHCMNEVALFATS 116 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHHHHHHHHHHHHHHHHHHSCCCCEEEEEEG
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccccCcHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 46789999999876543 677888898899999995 59999999988899999999887766777899999999
Q ss_pred hhHHHHHHHHH--hCCCceeEEEEecCCCC
Q 005190 204 LGACIALAVAA--RNPDIDLVLILVNPATS 231 (709)
Q Consensus 204 ~GG~iAl~~A~--~~P~~v~~lVl~~p~~~ 231 (709)
|||.+|+.+|. .+|++|+++|+++|...
T Consensus 117 mGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 117 TGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp GGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred HhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 99999999999 57999999999988543
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=180.37 Aligned_cols=171 Identities=18% Similarity=0.165 Sum_probs=128.8
Q ss_pred CCCEEEEeCCCCCC---cccHHH-HHHHhcC--CceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCC-CCEEEEEec
Q 005190 131 DSPLLLFLPGIDGV---GLGLIR-QHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPK-RPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s---~~~~~~-~~~~L~~--~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~-~~v~LvGhS 203 (709)
+.|+|||+||++++ ...|.. +.+.|++ +|+|+++|+||++..+ +.+++..+++. .+. .+++|+|||
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~~---~~~~~~~~~~~----l~~~~~~~lvG~S 75 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITAR---ESIWLPFMETE----LHCDEKTIIIGHS 75 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTCC---HHHHHHHHHHT----SCCCTTEEEEEET
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCccc---HHHHHHHHHHH----hCcCCCEEEEEcC
Confidence 46789999999998 466776 7888976 8999999999986443 45566666665 334 789999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
|||.+|+.+|.++| ++++|++++......... .....+...+
T Consensus 76 ~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-------------------~~~~~~~~~~----------------- 117 (194)
T 2qs9_A 76 SGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN-------------------ERASGYFTRP----------------- 117 (194)
T ss_dssp HHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH-------------------HHHTSTTSSC-----------------
T ss_pred cHHHHHHHHHHhCC--CCEEEEEcCCccccchhh-------------------hHHHhhhccc-----------------
Confidence 99999999999999 999999998654211000 0000000000
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcE
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE 363 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~ 363 (709)
.. ...+..+.+|+++++|++|.++|.+. .+.+.+.+ +++
T Consensus 118 ---------------------~~------------------~~~~~~~~~p~lii~G~~D~~vp~~~-~~~~~~~~-~~~ 156 (194)
T 2qs9_A 118 ---------------------WQ------------------WEKIKANCPYIVQFGSTDDPFLPWKE-QQEVADRL-ETK 156 (194)
T ss_dssp ---------------------CC------------------HHHHHHHCSEEEEEEETTCSSSCHHH-HHHHHHHH-TCE
T ss_pred ---------------------cc------------------HHHHHhhCCCEEEEEeCCCCcCCHHH-HHHHHHhc-CCe
Confidence 00 01122346799999999999999997 88898888 899
Q ss_pred EEEEcCCCccccccChhhHHHHHh
Q 005190 364 PRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 364 ~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
+++++++||+++.|+|+.+++++.
T Consensus 157 ~~~~~~~gH~~~~~~p~~~~~~~~ 180 (194)
T 2qs9_A 157 LHKFTDCGHFQNTEFHELITVVKS 180 (194)
T ss_dssp EEEESSCTTSCSSCCHHHHHHHHH
T ss_pred EEEeCCCCCccchhCHHHHHHHHH
Confidence 999999999999999999988773
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-21 Score=187.41 Aligned_cols=163 Identities=17% Similarity=0.157 Sum_probs=137.7
Q ss_pred CCCEEEEeCCCCCCcccHHH--HHHHhc-CCceEEEEeCCCCCCC-------CHHHHH--HHHHHHHHHhhccCCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIR--QHQRLG-KIFDIWCLHIPVKDRT-------SFTGLV--KLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~--~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~--~dl~~~l~~~~~~~~~~~v~ 198 (709)
++|+||++||++++...|.. +.+.|+ +||.|+++|+||+|.| +++++. +++..+++.+ +.++++
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 106 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDAL----ELGPPV 106 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHH----TCCSCE
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhhcchHHHHHHHHHHh----CCCCeE
Confidence 57899999999999999998 588885 6799999999999988 455555 8888888774 356899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
++|||+||.+++.+|..+|+.++++|+++|......
T Consensus 107 l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-------------------------------------------- 142 (210)
T 1imj_A 107 VISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI-------------------------------------------- 142 (210)
T ss_dssp EEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS--------------------------------------------
T ss_pred EEEECchHHHHHHHHHhCccccceEEEeCCCccccc--------------------------------------------
Confidence 999999999999999999999999999988532000
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
....+.++++|+++++|++|. ++.+. .+.+ +.
T Consensus 143 ---------------------------------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~-~~~~-~~ 174 (210)
T 1imj_A 143 ---------------------------------------------NAANYASVKTPALIVYGDQDP-MGQTS-FEHL-KQ 174 (210)
T ss_dssp ---------------------------------------------CHHHHHTCCSCEEEEEETTCH-HHHHH-HHHH-TT
T ss_pred ---------------------------------------------cchhhhhCCCCEEEEEcCccc-CCHHH-HHHH-hh
Confidence 001235678999999999999 99886 8888 88
Q ss_pred cCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 359 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 359 ~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++++||+++.++|+++.+.|.+|
T Consensus 175 ~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 205 (210)
T 1imj_A 175 LPNHRVLIMKGAGHPCYLDKPEEWHTGLLDF 205 (210)
T ss_dssp SSSEEEEEETTCCTTHHHHCHHHHHHHHHHH
T ss_pred CCCCCEEEecCCCcchhhcCHHHHHHHHHHH
Confidence 8999999999999999999999999999854
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=177.45 Aligned_cols=174 Identities=17% Similarity=0.146 Sum_probs=134.3
Q ss_pred CCCEEEEeCCCCCCcc-cHHHHHH-Hh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 131 DSPLLLFLPGIDGVGL-GLIRQHQ-RL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~-~~~~~~~-~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
+.|+|||+||++++.. .|..... .| +++|+|+++|+|..+..+++++++++.++++. . .++++|+||||||.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~G~S~Gg~ 77 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHT----L-HENTYLVAHSLGCP 77 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGG----C-CTTEEEEEETTHHH
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCCCCCCHHHHHHHHHHHHHh----c-cCCEEEEEeCccHH
Confidence 4567999999999998 8888775 68 68999999999955555888999988888876 3 57899999999999
Q ss_pred HHHHHHHhCCC--ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHH
Q 005190 208 IALAVAARNPD--IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQ 285 (709)
Q Consensus 208 iAl~~A~~~P~--~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (709)
+++.+|.++|+ .++++|+++|....... . +. . ..+...
T Consensus 78 ~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-~----------~~--------~-~~~~~~-------------------- 117 (192)
T 1uxo_A 78 AILRFLEHLQLRAALGGIILVSGFAKSLPT-L----------QM--------L-DEFTQG-------------------- 117 (192)
T ss_dssp HHHHHHHTCCCSSCEEEEEEETCCSSCCTT-C----------GG--------G-GGGTCS--------------------
T ss_pred HHHHHHHHhcccCCccEEEEeccCCCcccc-c----------hh--------h-hhhhhc--------------------
Confidence 99999999999 99999999986543210 0 00 0 000000
Q ss_pred HHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEE
Q 005190 286 DLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR 365 (709)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~ 365 (709)
+.+ ...+.++++|+++++|++|.+++.+. .+.+.+.+ +++++
T Consensus 118 --------------------~~~----------------~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~-~~~~~ 159 (192)
T 1uxo_A 118 --------------------SFD----------------HQKIIESAKHRAVIASKDDQIVPFSF-SKDLAQQI-DAALY 159 (192)
T ss_dssp --------------------CCC----------------HHHHHHHEEEEEEEEETTCSSSCHHH-HHHHHHHT-TCEEE
T ss_pred --------------------CCC----------------HHHHHhhcCCEEEEecCCCCcCCHHH-HHHHHHhc-CceEE
Confidence 000 01234567899999999999999997 89999888 99999
Q ss_pred EEcCCCccccccChhhH---HHHHh
Q 005190 366 NFYGHGHFLLLEDGVDL---VTIIK 387 (709)
Q Consensus 366 ~i~~aGH~~~le~p~~~---~~~I~ 387 (709)
+++++||+.+.++++++ .+.|.
T Consensus 160 ~~~~~gH~~~~~~~~~~~~~~~~l~ 184 (192)
T 1uxo_A 160 EVQHGGHFLEDEGFTSLPIVYDVLT 184 (192)
T ss_dssp EETTCTTSCGGGTCSCCHHHHHHHH
T ss_pred EeCCCcCcccccccccHHHHHHHHH
Confidence 99999999999998655 44444
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=177.07 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=135.3
Q ss_pred CCCEEEEeCCC-----CCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 131 DSPLLLFLPGI-----DGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~-----~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
..|+||++||. ..+...|..+...|+ ++|.|+++|+||+|.| ......+|+.++++.+....+.+++++
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 109 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWL 109 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 57899999993 344556778888885 6899999999999998 235678888888888888777789999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
+|||+||.+++.+| .+| .++++|++++....
T Consensus 110 ~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~----------------------------------------------- 140 (208)
T 3trd_A 110 AGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY----------------------------------------------- 140 (208)
T ss_dssp EEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-----------------------------------------------
T ss_pred EEeCHHHHHHHHHh-ccC-CccEEEEecccccc-----------------------------------------------
Confidence 99999999999999 677 89999999885400
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
+ ....+..+++|+++++|++|.+++.+. .+.+.+.+
T Consensus 141 --------~-----------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~ 176 (208)
T 3trd_A 141 --------E-----------------------------------GFASLTQMASPWLIVQGDQDEVVPFEQ-VKAFVNQI 176 (208)
T ss_dssp --------G-----------------------------------GGTTCCSCCSCEEEEEETTCSSSCHHH-HHHHHHHS
T ss_pred --------C-----------------------------------CchhhhhcCCCEEEEECCCCCCCCHHH-HHHHHHHc
Confidence 0 001234568999999999999999997 88898888
Q ss_pred CC-cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 360 HK-CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 360 ~~-~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++ +++++++++||+++.+. +++.+.|.+|
T Consensus 177 ~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~f 206 (208)
T 3trd_A 177 SSPVEFVVMSGASHFFHGRL-IELRELLVRN 206 (208)
T ss_dssp SSCCEEEEETTCCSSCTTCH-HHHHHHHHHH
T ss_pred cCceEEEEeCCCCCcccccH-HHHHHHHHHH
Confidence 76 99999999999998775 7888888754
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.3e-20 Score=175.04 Aligned_cols=165 Identities=16% Similarity=0.191 Sum_probs=131.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCc---eEEEEeCCCCCCC---CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIF---DIWCLHIPVKDRT---SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~---~Vi~~Dl~G~G~S---s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
++|+|||+||++++...|..+.+.|. .+| +|+++|+||+|.| +.+++++++.++++. .+.++++|+|||
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~----~~~~~~~lvG~S 77 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDE----TGAKKVDIVAHS 77 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHH----HCCSCEEEEEET
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchhhhHHHHHHHHHHHHHH----cCCCeEEEEEEC
Confidence 46789999999999999999999995 566 7999999999999 567778888888876 345789999999
Q ss_pred hhHHHHHHHHHhC--CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 204 LGACIALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 204 ~GG~iAl~~A~~~--P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||.+++.++.++ |+.++++|++++....... ..
T Consensus 78 ~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~-----------------------------~~--------------- 113 (181)
T 1isp_A 78 MGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG-----------------------------KA--------------- 113 (181)
T ss_dssp HHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS-----------------------------BC---------------
T ss_pred ccHHHHHHHHHhcCCCceEEEEEEEcCccccccc-----------------------------cc---------------
Confidence 9999999999998 8999999999885321000 00
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~ 361 (709)
++. .....++|+++++|++|.+++++. . .+++
T Consensus 114 -----------------------~~~-------------------~~~~~~~p~l~i~G~~D~~v~~~~-~-----~~~~ 145 (181)
T 1isp_A 114 -----------------------LPG-------------------TDPNQKILYTSIYSSADMIVMNYL-S-----RLDG 145 (181)
T ss_dssp -----------------------CCC-------------------SCTTCCCEEEEEEETTCSSSCHHH-H-----CCBT
T ss_pred -----------------------CCC-------------------CCCccCCcEEEEecCCCccccccc-c-----cCCC
Confidence 000 001235799999999999999884 3 3688
Q ss_pred cEEEEEcCCCccccccChhhHHHHHhhcccccc
Q 005190 362 CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 394 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r 394 (709)
+++++++++||+.+.++| ++.+.|.+ |+.+
T Consensus 146 ~~~~~~~~~gH~~~~~~~-~~~~~i~~--fl~~ 175 (181)
T 1isp_A 146 ARNVQIHGVGHIGLLYSS-QVNSLIKE--GLNG 175 (181)
T ss_dssp SEEEEESSCCTGGGGGCH-HHHHHHHH--HHTT
T ss_pred CcceeeccCchHhhccCH-HHHHHHHH--HHhc
Confidence 999999999999999997 68888884 4443
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-20 Score=175.43 Aligned_cols=162 Identities=17% Similarity=0.156 Sum_probs=131.9
Q ss_pred CCEEEEeCCCCCCc-ccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 132 SPLLLFLPGIDGVG-LGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~-~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
+|+|||+||++++. ..|......+.. .++.+|++|++..+++++++++.+++++ .+ ++++|+||||||.+|+
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~l~G~S~Gg~~a~ 89 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQADLDRWVLAIRRELSV----CT-QPVILIGHSFGALAAC 89 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSSCCHHHHHHHHHHHHHT----CS-SCEEEEEETHHHHHHH
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCCcCHHHHHHHHHHHHHh----cC-CCeEEEEEChHHHHHH
Confidence 67899999999988 678777765433 4577899999988999999999999987 43 7899999999999999
Q ss_pred HHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHh
Q 005190 211 AVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQD 290 (709)
Q Consensus 211 ~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (709)
.+|.++|++++++|+++|...... ..+ . .
T Consensus 90 ~~a~~~p~~v~~lvl~~~~~~~~~-----------~~~-----------------~---------------~-------- 118 (191)
T 3bdv_A 90 HVVQQGQEGIAGVMLVAPAEPMRF-----------EID-----------------D---------------R-------- 118 (191)
T ss_dssp HHHHTTCSSEEEEEEESCCCGGGG-----------TCT-----------------T---------------T--------
T ss_pred HHHHhcCCCccEEEEECCCccccc-----------cCc-----------------c---------------c--------
Confidence 999999999999999998544210 000 0 0
Q ss_pred HHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCC
Q 005190 291 LVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGH 370 (709)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~a 370 (709)
..+.++++|+++++|++|.+++.+. .+.+.+.+ ++++++++++
T Consensus 119 -----------------------------------~~~~~~~~P~lii~g~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~ 161 (191)
T 3bdv_A 119 -----------------------------------IQASPLSVPTLTFASHNDPLMSFTR-AQYWAQAW-DSELVDVGEA 161 (191)
T ss_dssp -----------------------------------SCSSCCSSCEEEEECSSBTTBCHHH-HHHHHHHH-TCEEEECCSC
T ss_pred -----------------------------------cccccCCCCEEEEecCCCCcCCHHH-HHHHHHhc-CCcEEEeCCC
Confidence 2246789999999999999999997 88888877 8999999999
Q ss_pred Cccccc----cChhhHHHHHhhc
Q 005190 371 GHFLLL----EDGVDLVTIIKGA 389 (709)
Q Consensus 371 GH~~~l----e~p~~~~~~I~~~ 389 (709)
||+++. +.|+.+ +.|.+|
T Consensus 162 gH~~~~~~~~~~~~~~-~~i~~f 183 (191)
T 3bdv_A 162 GHINAEAGFGPWEYGL-KRLAEF 183 (191)
T ss_dssp TTSSGGGTCSSCHHHH-HHHHHH
T ss_pred CcccccccchhHHHHH-HHHHHH
Confidence 999998 456555 777743
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=181.94 Aligned_cols=186 Identities=19% Similarity=0.183 Sum_probs=143.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCC------------------HHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTS------------------FTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss------------------~~~~~~dl~~~l~~~~~~ 191 (709)
+.|+||++||++++...|..+++.|+ +||.|+++|+||+|.|+ +++.++|+.++++.+...
T Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 102 (238)
T 1ufo_A 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERR 102 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 47899999999999999999888885 67999999999999881 356788888888887654
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHH
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (709)
.. .+++++|||+||.+|+.+|..+|+.+.+++++++......... .. ..+
T Consensus 103 ~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------------------~~~----- 152 (238)
T 1ufo_A 103 FG-LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG-----QV-------------------VED----- 152 (238)
T ss_dssp HC-CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT-----CC-------------------CCC-----
T ss_pred cC-CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhh-----hc-------------------cCC-----
Confidence 43 7899999999999999999999999999998877443211100 00 000
Q ss_pred HHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccC-CccEEEEeeCCCCCCCcHH
Q 005190 272 DNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAV-KAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLvi~G~~D~~v~~~~ 350 (709)
.. ... .. .......+.++ ++|+++++|++|.+++.+.
T Consensus 153 ---------~~-----~~~--------------------------~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 190 (238)
T 1ufo_A 153 ---------PG-----VLA--------------------------LY--QAPPATRGEAYGGVPLLHLHGSRDHIVPLAR 190 (238)
T ss_dssp ---------HH-----HHH--------------------------HH--HSCGGGCGGGGTTCCEEEEEETTCTTTTHHH
T ss_pred ---------cc-----cch--------------------------hh--cCChhhhhhhccCCcEEEEECCCCCccCcHH
Confidence 00 000 00 00112344667 8999999999999999997
Q ss_pred HHHHHHhhcC------CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALH------KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~------~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+.+.++ ++++++++++||.++.+.++++.+.|.++
T Consensus 191 -~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~ 234 (238)
T 1ufo_A 191 -MEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHW 234 (238)
T ss_dssp -HHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHH
Confidence 888988887 89999999999999999999988888743
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-19 Score=180.94 Aligned_cols=165 Identities=17% Similarity=0.226 Sum_probs=135.1
Q ss_pred CCCEEEEeCCCCCCc-----ccHHHHHHHhc-CCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCC-CCE
Q 005190 131 DSPLLLFLPGIDGVG-----LGLIRQHQRLG-KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPK-RPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-----~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~-~~v 197 (709)
+.|+||++||++++. ..|..+++.|+ ++|.|+++|+||+|.| +..++ +|+.++++.+...... .++
T Consensus 46 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~i 124 (249)
T 2i3d_A 46 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGEL-SDAASALDWVQSLHPDSKSC 124 (249)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHH-HHHHHHHHHHHHHCTTCCCE
T ss_pred CCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCccchH-HHHHHHHHHHHHhCCCCCeE
Confidence 578999999985433 23577888884 6899999999999998 24454 8899999888765433 479
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhc
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (709)
+|+||||||.+++.+|..+|+ ++++|+++|......
T Consensus 125 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------------------------------------- 160 (249)
T 2i3d_A 125 WVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------------------------------------- 160 (249)
T ss_dssp EEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-------------------------------------------
T ss_pred EEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-------------------------------------------
Confidence 999999999999999999999 999999988543100
Q ss_pred cCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005190 278 LSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357 (709)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~ 357 (709)
...+.++++|+++++|++|.+++.+. .+.+.+
T Consensus 161 -----------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~ 192 (249)
T 2i3d_A 161 -----------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKD-VNGLVE 192 (249)
T ss_dssp -----------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHH-HHHHHH
T ss_pred -----------------------------------------------hhhhcccCCCEEEEEcCCCCCCCHHH-HHHHHH
Confidence 01235678999999999999999997 888888
Q ss_pred hcC-----CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 358 ALH-----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 358 ~~~-----~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++ ++++++++++||..+ ++++++.+.|.+|
T Consensus 193 ~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~f 228 (249)
T 2i3d_A 193 KLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDY 228 (249)
T ss_dssp HHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHH
T ss_pred HHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHH
Confidence 777 789999999999998 8999999999955
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.5e-20 Score=173.72 Aligned_cols=160 Identities=19% Similarity=0.187 Sum_probs=128.1
Q ss_pred CCCEEEEeCCCCCCcccHH--HHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLI--RQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~--~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+.|+||++||++++...|. .+.+.|. .+|.|+++|+||+|.| ++.+.++++.+.++. ..+..+++++
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 79 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARA---ATEKGPVVLA 79 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHH---HHTTSCEEEE
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh---cCCCCCEEEE
Confidence 4778999999999888665 7888885 6899999999999997 344444444444444 3345789999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+|+.+|.++| ++++|+++|....... .
T Consensus 80 G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~------------------------------~-------------- 113 (176)
T 2qjw_A 80 GSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL------------------------------P-------------- 113 (176)
T ss_dssp EETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB------------------------------C--------------
T ss_pred EECHHHHHHHHHHHhcC--hhheEEECCcCCcccc------------------------------C--------------
Confidence 99999999999999999 9999999885542100 0
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
.+..+++|+++++|++|.+++.+. .+.+.+..
T Consensus 114 ----------------------------------------------~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~- 145 (176)
T 2qjw_A 114 ----------------------------------------------ALDAAAVPISIVHAWHDELIPAAD-VIAWAQAR- 145 (176)
T ss_dssp ----------------------------------------------CCCCCSSCEEEEEETTCSSSCHHH-HHHHHHHH-
T ss_pred ----------------------------------------------cccccCCCEEEEEcCCCCccCHHH-HHHHHHhC-
Confidence 025678999999999999999997 88888776
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++ ++||... ++++++.+.|.+|
T Consensus 146 ~~~~~~~-~~~H~~~-~~~~~~~~~i~~f 172 (176)
T 2qjw_A 146 SARLLLV-DDGHRLG-AHVQAASRAFAEL 172 (176)
T ss_dssp TCEEEEE-SSCTTCT-TCHHHHHHHHHHH
T ss_pred CceEEEe-CCCcccc-ccHHHHHHHHHHH
Confidence 7899999 8999984 8899999999854
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-20 Score=188.53 Aligned_cols=215 Identities=17% Similarity=0.188 Sum_probs=141.9
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~ 204 (709)
.++++|||+||++++...|..+.+ |+.+|+|+++|+||+|.+ +++++++++.++++.+ .+..+++|+||||
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~l~GhS~ 94 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRR---QPRGPYHLGGWSS 94 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGCCCCHHHHHHHHHHHHHHH---CSSCCEEEEEETH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEECH
Confidence 346789999999999999999999 989999999999999876 7889999998888773 2346899999999
Q ss_pred hHHHHHHHHH---hCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 205 GACIALAVAA---RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 205 GG~iAl~~A~---~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
||.+|+.+|. .+|+.+.++|++++......... +......+..+ ....+.+... .........
T Consensus 95 Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~ 160 (265)
T 3ils_A 95 GGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQL----------PRAFYEHCNSI-GLFATQPGAS---PDGSTEPPS 160 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCC----------CHHHHHHHHHT-TTTTTSSSSC---SSSCSCCCT
T ss_pred hHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccccc----------CHHHHHHHHHH-HHhCCCcccc---ccCCHHHHH
Confidence 9999999998 77888999999988654322111 00000000000 0000000000 000000000
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEE-EEeeCC---CCCC-----------
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQML-VLCSGK---DQLM----------- 346 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL-vi~G~~---D~~v----------- 346 (709)
.....+..+ ......+.......++||++ +++|++ |..+
T Consensus 161 ~~~~~~~~~--------------------------~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~ 214 (265)
T 3ils_A 161 YLIPHFTAV--------------------------VDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMI 214 (265)
T ss_dssp THHHHHHHH--------------------------HHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTT
T ss_pred HHHHHHHHH--------------------------HHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhh
Confidence 000000000 01011111123357899988 999999 9988
Q ss_pred ---CcHHHHHHHHhhcC--CcEEEEEcCCCcccc--ccChhhHHHHHhhc
Q 005190 347 ---PSQEEGERLSSALH--KCEPRNFYGHGHFLL--LEDGVDLVTIIKGA 389 (709)
Q Consensus 347 ---~~~~~~~~l~~~~~--~~~~~~i~~aGH~~~--le~p~~~~~~I~~~ 389 (709)
+... ...+.+..+ +++++++++|||+.+ .|+|+++++.|.++
T Consensus 215 ~~~~~~~-~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~f 263 (265)
T 3ils_A 215 QKRTEFG-PDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRV 263 (265)
T ss_dssp SCCCCCS-CTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHH
T ss_pred ccccccC-cchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHH
Confidence 4443 456666665 899999999999999 89999999999843
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.5e-20 Score=185.91 Aligned_cols=187 Identities=11% Similarity=0.097 Sum_probs=144.4
Q ss_pred CCCEEEEeCCC---CCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005190 131 DSPLLLFLPGI---DGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (709)
Q Consensus 131 ~~p~Vv~lHG~---~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG 206 (709)
+.|+|||+||. +++...|..+++.|+ .||.|+++|++|+|..++.++++|+.++++++..... .+++|+||||||
T Consensus 62 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg 140 (262)
T 2pbl_A 62 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 140 (262)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCChHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHH
Confidence 57899999994 477888988888884 7899999999999999999999999999999877654 789999999999
Q ss_pred HHHHHHHHhC------CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 207 CIALAVAARN------PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 207 ~iAl~~A~~~------P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
.+|+.+|..+ |+.++++|+++|........ .. .. ... ... .
T Consensus 141 ~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~--------~~---~~----~~~---~~~--------------~- 187 (262)
T 2pbl_A 141 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLL--------RT---SM----NEK---FKM--------------D- 187 (262)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGG--------GS---TT----HHH---HCC--------------C-
T ss_pred HHHHHHhccccccccccccceEEEEecCccCchHHH--------hh---hh----hhh---hCC--------------C-
Confidence 9999999988 89999999999865431110 00 00 000 000 0
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
. .... .......+..+++|+|+++|++|.+++.+. ++.+.+.++
T Consensus 188 -~------~~~~----------------------------~~~~~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~ 231 (262)
T 2pbl_A 188 -A------DAAI----------------------------AESPVEMQNRYDAKVTVWVGGAERPAFLDQ-AIWLVEAWD 231 (262)
T ss_dssp -H------HHHH----------------------------HTCGGGCCCCCSCEEEEEEETTSCHHHHHH-HHHHHHHHT
T ss_pred -H------HHHH----------------------------hcCcccccCCCCCCEEEEEeCCCCcccHHH-HHHHHHHhC
Confidence 0 0000 000012346789999999999999999997 899999888
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
+++++++++||+.++|++++....|.+
T Consensus 232 -~~~~~~~~~~H~~~~~~~~~~~~~l~~ 258 (262)
T 2pbl_A 232 -ADHVIAFEKHHFNVIEPLADPESDLVA 258 (262)
T ss_dssp -CEEEEETTCCTTTTTGGGGCTTCHHHH
T ss_pred -CeEEEeCCCCcchHHhhcCCCCcHHHH
Confidence 999999999999999988877766653
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.8e-20 Score=187.65 Aligned_cols=196 Identities=15% Similarity=0.151 Sum_probs=143.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccC--CCCCEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS--PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~--~~~~v~Lv 200 (709)
..|+|||+||++++...|..++..|+ .+|.|+++|+||||.| ++.++++|+.++++++.... +.++++|+
T Consensus 27 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~ 106 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVV 106 (290)
T ss_dssp SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEE
Confidence 47899999999999999999999996 5899999999999998 67889999999999987653 23589999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+++.+|..+| ++++++++|............. .....
T Consensus 107 G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~-~~~~~--------------------------------- 150 (290)
T 3ksr_A 107 GLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKV-SLNAD--------------------------------- 150 (290)
T ss_dssp EETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHH-HHHHS---------------------------------
T ss_pred EEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccc-cccCC---------------------------------
Confidence 99999999999999988 8889999886543221100000 00000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
.....+... ..... .......+.++++|+|+++|++|.+++.+. .+.+.+.++
T Consensus 151 -~~~~~~~~~-------------~~~~~------------~~~~~~~~~~~~~P~lii~G~~D~~v~~~~-~~~~~~~~~ 203 (290)
T 3ksr_A 151 -PDLMDYRRR-------------ALAPG------------DNLALAACAQYKGDVLLVEAENDVIVPHPV-MRNYADAFT 203 (290)
T ss_dssp -TTHHHHTTS-------------CCCGG------------GCHHHHHHHHCCSEEEEEEETTCSSSCHHH-HHHHHHHTT
T ss_pred -hhhhhhhhh-------------hhhhc------------cccHHHHHHhcCCCeEEEEecCCcccChHH-HHHHHHHhc
Confidence 000000000 00000 001113346788999999999999999997 888888877
Q ss_pred Cc---EEEEEcCCCcccccc-ChhhHHHHHhhc
Q 005190 361 KC---EPRNFYGHGHFLLLE-DGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~---~~~~i~~aGH~~~le-~p~~~~~~I~~~ 389 (709)
+. ++++++++||+++.+ +++++.+.+.+|
T Consensus 204 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 236 (290)
T 3ksr_A 204 NARSLTSRVIAGADHALSVKEHQQEYTRALIDW 236 (290)
T ss_dssp TSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred cCCCceEEEcCCCCCCCCcchHHHHHHHHHHHH
Confidence 54 599999999988665 888899888865
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=181.73 Aligned_cols=168 Identities=17% Similarity=0.196 Sum_probs=137.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEE--eCCCCCCC-----------C---HHHHHHHHHHHHHHhhccCCC
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCL--HIPVKDRT-----------S---FTGLVKLVESTVRSESNRSPK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~--Dl~G~G~S-----------s---~~~~~~dl~~~l~~~~~~~~~ 194 (709)
+.|+||++||++++...|..+++.|+++|.|+++ |++|+|.| + +.+.++++.++++.+....+.
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQA 140 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCC
Confidence 5789999999999999999999999888999999 89999876 2 233456666666665554467
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHH
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (709)
.+++|+||||||.+|+.+|..+|++++++|++++......
T Consensus 141 ~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------------------------- 180 (251)
T 2r8b_A 141 GPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------------------------- 180 (251)
T ss_dssp CSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------------------
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------------------
Confidence 8999999999999999999999999999999998544210
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~ 354 (709)
. .....+++|+|+++|++|.+++.+. .+.
T Consensus 181 ------------------~--------------------------------~~~~~~~~P~li~~g~~D~~~~~~~-~~~ 209 (251)
T 2r8b_A 181 ------------------K--------------------------------ISPAKPTRRVLITAGERDPICPVQL-TKA 209 (251)
T ss_dssp ------------------C--------------------------------CCCCCTTCEEEEEEETTCTTSCHHH-HHH
T ss_pred ------------------c--------------------------------ccccccCCcEEEeccCCCccCCHHH-HHH
Confidence 0 0113468999999999999999986 888
Q ss_pred HHhhcC--CcEEE-EEcCCCccccccChhhHHHHHhhc
Q 005190 355 LSSALH--KCEPR-NFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 355 l~~~~~--~~~~~-~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+.+.++ +.++. +++++||.++.+.++.+.+.|.++
T Consensus 210 ~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 210 LEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAY 247 (251)
T ss_dssp HHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHHh
Confidence 888877 66766 788999999999998888888743
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-19 Score=180.79 Aligned_cols=164 Identities=13% Similarity=0.122 Sum_probs=132.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhc------cCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN------RSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~------~~~~~~v~LvGhS 203 (709)
..|+|||+||++++...|..+++.|+ ++|.|+++|++|+|.+.. ....|+...++.+.. ..+..+++|+|||
T Consensus 53 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S 131 (262)
T 1jfr_A 53 TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD-SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHS 131 (262)
T ss_dssp CEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH-HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEET
T ss_pred CCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCc-hhHHHHHHHHHHHHhccccccccCcccEEEEEEC
Confidence 46789999999999999999999994 689999999999998732 233444444444433 3345689999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
|||.+++.+|.++|+ ++++|+++|...
T Consensus 132 ~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---------------------------------------------------- 158 (262)
T 1jfr_A 132 MGGGGSLEAAKSRTS-LKAAIPLTGWNT---------------------------------------------------- 158 (262)
T ss_dssp HHHHHHHHHHHHCTT-CSEEEEESCCCS----------------------------------------------------
T ss_pred hhHHHHHHHHhcCcc-ceEEEeecccCc----------------------------------------------------
Confidence 999999999999998 899999887321
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC--
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-- 361 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~-- 361 (709)
...+.++++|+|+++|++|.+++.+...+.+.+.+++
T Consensus 159 -----------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~ 197 (262)
T 1jfr_A 159 -----------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSL 197 (262)
T ss_dssp -----------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTS
T ss_pred -----------------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCC
Confidence 0223567899999999999999987216677776654
Q ss_pred -cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 362 -CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 362 -~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++++++++||+.+.++++++.+.|.+|
T Consensus 198 ~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 226 (262)
T 1jfr_A 198 DKAYLELRGASHFTPNTSDTTIAKYSISW 226 (262)
T ss_dssp CEEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred CceEEEeCCCCcCCcccchHHHHHHHHHH
Confidence 4899999999999999999999999966
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.6e-20 Score=195.79 Aligned_cols=100 Identities=21% Similarity=0.278 Sum_probs=87.6
Q ss_pred CCCEEEEeCCCCCCcccHH----------------HHHHHhc-CCceEEEEeCCCCCCC--------------CHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLI----------------RQHQRLG-KIFDIWCLHIPVKDRT--------------SFTGLVK 179 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~----------------~~~~~L~-~~~~Vi~~Dl~G~G~S--------------s~~~~~~ 179 (709)
++|+|||+||++++...|. .+++.|+ +||+|+++|+||||.| +++++++
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 128 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWIS 128 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHH
Confidence 4678999999999988665 7888885 5899999999999988 2378889
Q ss_pred HHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC-CCceeEEEEecCCC
Q 005190 180 LVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPAT 230 (709)
Q Consensus 180 dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~-P~~v~~lVl~~p~~ 230 (709)
|+.++++++....+.++++++||||||.+|+.+|.++ |++++++|++++..
T Consensus 129 d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~ 180 (354)
T 2rau_A 129 DIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180 (354)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccc
Confidence 9999999877666678999999999999999999999 99999999997644
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=181.64 Aligned_cols=213 Identities=15% Similarity=0.212 Sum_probs=126.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGAC 207 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~---~~~v~LvGhS~GG~ 207 (709)
.+++|||+||++++...|..+++.|+++|+|+++|+||||.|+.. ..+|+.++++.+....+ ..+++|+||||||.
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~-~~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~ 90 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTS-AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGM 90 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCC-TTTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCH
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCC-CcCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHH
Confidence 366899999999999999999999998999999999999998321 12344444444333232 26899999999999
Q ss_pred HHHHHHHh------CCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 208 IALAVAAR------NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 208 iAl~~A~~------~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
+|+.+|.+ +|+.+ ++.+.......... ...... ......+.. ... ...
T Consensus 91 iA~~~A~~~~~~~~~p~~v---~l~~~~~~~~~~~~------~~~~~~--~~~~~~~~~-~~~--------------~~~ 144 (242)
T 2k2q_B 91 ITFRLAQKLEREGIFPQAV---IISAIQPPHIQRKK------VSHLPD--DQFLDHIIQ-LGG--------------MPA 144 (242)
T ss_dssp HHHHHHHHHHHHHCSSCSE---EEEEEECSCCCSCC------CSSCTT--HHHHHTTCC-TTC--------------CCC
T ss_pred HHHHHHHHHHHcCCCCCEE---EEECCCCCCCCccc------ccCCCH--HHHHHHHHH-hCC--------------CCh
Confidence 99999987 56653 33321111000000 000000 000000000 000 000
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 361 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~ 361 (709)
... .+.. ...... ..+....... .......+.++++|+|+++|++|.+++ .. ...+.+..++
T Consensus 145 ~~~----~~~~--------~~~~~~-~~~~~~~~~~---~~~~~~~l~~i~~P~lvi~G~~D~~~~-~~-~~~~~~~~~~ 206 (242)
T 2k2q_B 145 ELV----ENKE--------VMSFFL-PSFRSDYRAL---EQFELYDLAQIQSPVHVFNGLDDKKCI-RD-AEGWKKWAKD 206 (242)
T ss_dssp TTT----HHHH--------TTTTCC-SCHHHHHHHH---TCCCCSCCTTCCCSEEEEEECSSCCHH-HH-HHHHHTTCCC
T ss_pred HHh----cCHH--------HHHHHH-HHHHHHHHHH---HhcccCCCCccCCCEEEEeeCCCCcCH-HH-HHHHHHHhcC
Confidence 000 0000 000000 0111111111 111112267899999999999999865 33 5677778888
Q ss_pred cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 362 CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+++++++ ||++++|+|+++++.|.+|
T Consensus 207 ~~~~~~~~-gH~~~~e~p~~~~~~i~~f 233 (242)
T 2k2q_B 207 ITFHQFDG-GHMFLLSQTEEVAERIFAI 233 (242)
T ss_dssp SEEEEEEC-CCSHHHHHCHHHHHHHHHH
T ss_pred CeEEEEeC-CceeEcCCHHHHHHHHHHH
Confidence 88888985 9999999999999999943
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=175.52 Aligned_cols=167 Identities=15% Similarity=0.106 Sum_probs=136.6
Q ss_pred CCCEEEEeCCCCCCcccH--HHHHHHhc-CCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHHhhccC--CC
Q 005190 131 DSPLLLFLPGIDGVGLGL--IRQHQRLG-KIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSESNRS--PK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~--~~~~~~L~-~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~~~~~~--~~ 194 (709)
..|+||++||++++...| ..+.+.|+ +||.|+++|+||+|.| +++++++|+.++++.+.... ..
T Consensus 34 ~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 113 (223)
T 2o2g_A 34 ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQH 113 (223)
T ss_dssp CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCC
Confidence 478999999999988854 46788885 6899999999999975 56788899999999887653 24
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHH
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (709)
.+++++|||+||.+++.+|..+|+.++++|++++....
T Consensus 114 ~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~------------------------------------------ 151 (223)
T 2o2g_A 114 LKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL------------------------------------------ 151 (223)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG------------------------------------------
T ss_pred CcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc------------------------------------------
Confidence 58999999999999999999999999999999873110
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 354 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~ 354 (709)
....+.++++|+++++|++|.+++... .+.
T Consensus 152 -------------------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 181 (223)
T 2o2g_A 152 -------------------------------------------------APSALPHVKAPTLLIVGGYDLPVIAMN-EDA 181 (223)
T ss_dssp -------------------------------------------------CTTTGGGCCSCEEEEEETTCHHHHHHH-HHH
T ss_pred -------------------------------------------------CHHHHhcCCCCEEEEEccccCCCCHHH-HHH
Confidence 001235678999999999999998664 667
Q ss_pred HHhhcCCcEEEEEcCCCccccc-cChhhHHHHHhhc
Q 005190 355 LSSALHKCEPRNFYGHGHFLLL-EDGVDLVTIIKGA 389 (709)
Q Consensus 355 l~~~~~~~~~~~i~~aGH~~~l-e~p~~~~~~I~~~ 389 (709)
+.+..+++++++++++||.... +.++++.+.+.+|
T Consensus 182 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 217 (223)
T 2o2g_A 182 LEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEW 217 (223)
T ss_dssp HHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHH
T ss_pred HHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHH
Confidence 7777788999999999999776 4568888888855
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=173.22 Aligned_cols=166 Identities=16% Similarity=0.157 Sum_probs=134.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC----------------------CHHHHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT----------------------SFTGLVKLVESTVRS 187 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S----------------------s~~~~~~dl~~~l~~ 187 (709)
..|+||++||++++...|..++..|+ .+|.|+++|+||+|.| +++++.+|+.+++++
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRY 106 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHH
Confidence 46789999999999999999999995 5999999999999976 235568899999999
Q ss_pred hhccCC-CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 188 ESNRSP-KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 188 ~~~~~~-~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
+..... ..+++++|||+||.+|+.+|..+| +++++++.+....
T Consensus 107 l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~---------------------------------- 150 (236)
T 1zi8_A 107 ARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE---------------------------------- 150 (236)
T ss_dssp HTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG----------------------------------
T ss_pred HHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc----------------------------------
Confidence 876554 468999999999999999999998 8888887662110
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
+ ....+.++++|+++++|++|.++
T Consensus 151 -----------------------~---------------------------------~~~~~~~~~~P~l~i~g~~D~~~ 174 (236)
T 1zi8_A 151 -----------------------K---------------------------------QLNKVPEVKHPALFHMGGQDHFV 174 (236)
T ss_dssp -----------------------G---------------------------------CGGGGGGCCSCEEEEEETTCTTS
T ss_pred -----------------------c---------------------------------chhhhhhcCCCEEEEecCCCCCC
Confidence 0 00234667899999999999999
Q ss_pred CcHHHHHHHHhhc---CCcEEEEEcCCCccccccCh--------hhHHHHHhhc
Q 005190 347 PSQEEGERLSSAL---HKCEPRNFYGHGHFLLLEDG--------VDLVTIIKGA 389 (709)
Q Consensus 347 ~~~~~~~~l~~~~---~~~~~~~i~~aGH~~~le~p--------~~~~~~I~~~ 389 (709)
+.+. .+.+.+.+ +++++++++++||....+.+ +++.+.+.+|
T Consensus 175 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~f 227 (236)
T 1zi8_A 175 PAPS-RQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDF 227 (236)
T ss_dssp CHHH-HHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHH
Confidence 9997 88888766 58999999999998887765 3455666643
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=176.47 Aligned_cols=201 Identities=12% Similarity=0.082 Sum_probs=140.0
Q ss_pred CCCEEEEeCCCC-----CCcccHHHHHHHh-----cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 131 DSPLLLFLPGID-----GVGLGLIRQHQRL-----GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~-----~s~~~~~~~~~~L-----~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+.|+|||+||.+ ++...|..+++.| ..+|.|+++|+++.+.+++....+|+.+.++.+....+..+++|+
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMV 119 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCCcHHHHHHHHHHHHHHhCCcCcEEEE
Confidence 578999999955 4667899999999 689999999999999887777777877777777666667899999
Q ss_pred EechhHHHHHHHHHhC-----------------CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhc
Q 005190 201 GESLGACIALAVAARN-----------------PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~-----------------P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (709)
||||||.+|+.+|..+ |+.++++|++++........ ...+. .. .......
T Consensus 120 G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~--------~~~~~-~~----~~~~~~~ 186 (273)
T 1vkh_A 120 GHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELL--------IEYPE-YD----CFTRLAF 186 (273)
T ss_dssp EETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHH--------HHCGG-GH----HHHHHHC
T ss_pred EeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhh--------hhccc-HH----HHHHHHh
Confidence 9999999999999986 78899999998854421110 00000 00 0000000
Q ss_pred CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCC
Q 005190 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
+. .. . .+.. ....... .....+..+++|+|+++|++|
T Consensus 187 ~~-------------~~-~---------------------~~~~-~~~~~~~-------~~~~~~~~~~~P~lii~G~~D 223 (273)
T 1vkh_A 187 PD-------------GI-Q---------------------MYEE-EPSRVMP-------YVKKALSRFSIDMHLVHSYSD 223 (273)
T ss_dssp TT-------------CG-G---------------------GCCC-CHHHHHH-------HHHHHHHHHTCEEEEEEETTC
T ss_pred cc-------------cc-c---------------------chhh-cccccCh-------hhhhcccccCCCEEEEecCCc
Confidence 00 00 0 0000 0000000 001122347899999999999
Q ss_pred CCCCcHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 344 QLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++|.+. ++.+.+.++ ++++++++++||..++++ +++.+.|.+|
T Consensus 224 ~~vp~~~-~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~f 271 (273)
T 1vkh_A 224 ELLTLRQ-TNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDN 271 (273)
T ss_dssp SSCCTHH-HHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHT
T ss_pred CCCChHH-HHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHH
Confidence 9999986 887777654 589999999999999999 8888888754
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=172.78 Aligned_cols=171 Identities=15% Similarity=0.154 Sum_probs=135.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEE-------------------eCCCCCCC------CHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCL-------------------HIPVKDRT------SFTGLVKLVEST 184 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~-------------------Dl~G~G~S------s~~~~~~dl~~~ 184 (709)
+.|+|||+||++++...|..+.+.|+ .+|.|+++ |++|+... +++++++++.++
T Consensus 22 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
T 1fj2_A 22 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 101 (232)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccHHHHHHHHHHHHH
Confidence 57899999999999999999999997 59999998 77777222 567888889888
Q ss_pred HHHhhccCCC--CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhh
Q 005190 185 VRSESNRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 185 l~~~~~~~~~--~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
++++.. .+. ++++|+|||+||.+|+.+|.++|+.++++|++++........ +.
T Consensus 102 i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-----------~~------------- 156 (232)
T 1fj2_A 102 IDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-----------PQ------------- 156 (232)
T ss_dssp HHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-----------CS-------------
T ss_pred HHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-----------cc-------------
Confidence 888655 333 789999999999999999999999999999999854321100 00
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
....+..+++|+++++|++
T Consensus 157 -------------------------------------------------------------~~~~~~~~~~P~l~i~G~~ 175 (232)
T 1fj2_A 157 -------------------------------------------------------------GPIGGANRDISILQCHGDC 175 (232)
T ss_dssp -------------------------------------------------------------SCCCSTTTTCCEEEEEETT
T ss_pred -------------------------------------------------------------cccccccCCCCEEEEecCC
Confidence 0012356789999999999
Q ss_pred CCCCCcHHHHHHHHhhc------CCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 343 DQLMPSQEEGERLSSAL------HKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~------~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
|.+++.+. .+.+.+.+ +++++++++++||..+.|..+.+.+.|.+
T Consensus 176 D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~ 226 (232)
T 1fj2_A 176 DPLVPLMF-GSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDK 226 (232)
T ss_dssp CSSSCHHH-HHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CccCCHHH-HHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHHH
Confidence 99999986 77666655 56999999999999987777666666663
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=171.65 Aligned_cols=168 Identities=15% Similarity=0.153 Sum_probs=135.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc---CCceEEEEeCC-------------------CCCCC------CHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIP-------------------VKDRT------SFTGLVKLVE 182 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~Dl~-------------------G~G~S------s~~~~~~dl~ 182 (709)
..|+||++||++++...|..+++.|+ ++|.|+++|+| |+|.+ +++++++++.
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 102 (226)
T 3cn9_A 23 ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVI 102 (226)
T ss_dssp CCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHHHHHHH
Confidence 57899999999999999999999997 89999997766 77755 4677888888
Q ss_pred HHHHHhhc-cCCCCCEEEEEechhHHHHHHHHH-hCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhh
Q 005190 183 STVRSESN-RSPKRPVYLVGESLGACIALAVAA-RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (709)
Q Consensus 183 ~~l~~~~~-~~~~~~v~LvGhS~GG~iAl~~A~-~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (709)
.+++.+.. ..+..+++|+|||+||.+|+.+|. ++|+.++++|++++....... +
T Consensus 103 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~----------------------~-- 158 (226)
T 3cn9_A 103 ALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD----------------------L-- 158 (226)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG----------------------C--
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh----------------------h--
Confidence 88887644 223368999999999999999999 999999999999884321000 0
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
. + ....+++|+++++|
T Consensus 159 --------------------------------~-----------~---------------------~~~~~~~P~lii~G 174 (226)
T 3cn9_A 159 --------------------------------A-----------L---------------------DERHKRIPVLHLHG 174 (226)
T ss_dssp --------------------------------C-----------C---------------------CTGGGGCCEEEEEE
T ss_pred --------------------------------h-----------h---------------------cccccCCCEEEEec
Confidence 0 0 00346789999999
Q ss_pred CCCCCCCcHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 341 GKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
++|.+++.+. .+.+.+.++ ++++++++ +||.++.+.++++.+.|.+
T Consensus 175 ~~D~~~~~~~-~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~ 224 (226)
T 3cn9_A 175 SQDDVVDPAL-GRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRK 224 (226)
T ss_dssp TTCSSSCHHH-HHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHH
T ss_pred CCCCccCHHH-HHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHh
Confidence 9999999986 888887666 58999999 9999998888877777664
|
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=182.11 Aligned_cols=211 Identities=11% Similarity=-0.009 Sum_probs=138.2
Q ss_pred hHHhhcccceeeeccCCceeec-------cCCCCCCCCeEEEeccccchhhHHhhHHHHHH---HhcceEeeeccccccc
Q 005190 421 WMRVLSSPVMLSTLANGKIVRG-------LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMI---ESNILLRGLAHPMMYF 490 (709)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~g-------~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~---~~~~~~~~la~~~~~~ 490 (709)
+.+.+.++++.. .|.+|.| .||+|.+++|||+||||+. +|.+++...+.+ .....+.++|+..++.
T Consensus 97 ~~~~~ir~li~~---~~s~V~G~e~~~~~~E~l~~~~~vIfisNHQS~-~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~ 172 (367)
T 1iuq_A 97 FGQNYIRPLIDF---GNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLA 172 (367)
T ss_dssp HHHHHHGGGBCG---GGCEEECHHHHHHHHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHH
T ss_pred HHHHHHHHHHhh---cCCEeecchhhhhHHhhccCCCcEEEEECCccc-hhHHHHHHHHhhcccccccceEEEeehhhhc
Confidence 444455555441 2666888 7888889999999999975 588777777532 1123699999999997
Q ss_pred cccCCCCCCCChHHH--HHHhcCccc----c------HHH----------HHHHhcC-CCeEEEecCchhhhhccCCccc
Q 005190 491 KSKEGGLSDLSPYDV--MRIMGAVPV----S------GIN----------LYKLMSS-KSHVLLYPGGVREALHRKGEEY 547 (709)
Q Consensus 491 ~~~~~~~p~~~~~~~--~~~~g~i~v----~------~~~----------~~~~L~~-g~~v~ifPeG~r~~~~~~~~~~ 547 (709)
.|+ ...+ .+.++||.. + |++ +.+.|++ |.+++|||||||+.... +..
T Consensus 173 ~Pl--------~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~--~~g 242 (367)
T 1iuq_A 173 DPL--------CKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDP--STG 242 (367)
T ss_dssp CTT--------THHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCT--TTC
T ss_pred Ccc--------ccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCC--CCC
Confidence 753 3222 123335543 3 432 4567788 56999999999964321 123
Q ss_pred ee-ccCCChhHH----HHHHHcCCc--EEEeeeecchhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCc
Q 005190 548 KL-FWPESSEFV----RMATTFGAK--IVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQ 620 (709)
Q Consensus 548 ~l-~~~~k~G~~----~lA~~~~~p--IvPv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 620 (709)
++ .-+|++|.+ +||.++|+| ||||++. +.+++.-. +.+ -+.++.
T Consensus 243 ~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imppp---~~v---------e~~~g~---------------- 293 (367)
T 1iuq_A 243 EWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMPPP---SQV---------EIEIGE---------------- 293 (367)
T ss_dssp CBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSCCC-------------------------------------
T ss_pred ccccccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccCCc---ccc---------cccccc----------------
Confidence 32 227999999 999999999 9999998 44541100 000 000000
Q ss_pred ccccCccCCCCCceEEEEecCccccCCccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005190 621 DMHMPYPVPKVPGRFYFYFGKPIETKGRKR-ELRDREKAHELYLEIKSEVEKCLAYLKEKR 680 (709)
Q Consensus 621 ~~~~p~~~p~~~~~~~~~~G~pI~~~~~~~-~~~~~~~~~~~~~~v~~~i~~~~~~l~~~r 680 (709)
... ..++++.+.||+||+++++.. ...+++..+++.+++++.|.+.+++++..-
T Consensus 294 -----~r~-i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~~l~~~i 348 (367)
T 1iuq_A 294 -----KRV-IAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAI 348 (367)
T ss_dssp ------CC-CCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----cce-eecccEEEEECCccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 126899999999999987632 233455567899999999999998886554
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-18 Score=167.70 Aligned_cols=164 Identities=17% Similarity=0.152 Sum_probs=133.9
Q ss_pred CCCEEEEeCCCC---C--CcccHHHHHHHhc-CCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 131 DSPLLLFLPGID---G--VGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~--s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
+.|+||++||++ + ....|..+++.|+ ++|.|+++|+||+|.| ......+|+.++++.+....+..++++
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 115 (220)
T 2fuk_A 36 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWL 115 (220)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcccCchhHHHHHHHHHHHHhcCCCCcEEE
Confidence 478999999953 2 3345678888885 5899999999999998 235788999999999888777779999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
+|||+||.+++.+|..+ .++++|++++......
T Consensus 116 ~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------------------------------------- 148 (220)
T 2fuk_A 116 AGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------------------------------------- 148 (220)
T ss_dssp EEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------------------------------------
T ss_pred EEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------------------------------------
Confidence 99999999999999988 8999999988544211
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
+ ..+. ..+|+++++|++|.+++.+. .+.+.+.+
T Consensus 149 --------~-------------------------------------~~~~-~~~p~l~i~g~~D~~~~~~~-~~~~~~~~ 181 (220)
T 2fuk_A 149 --------F-------------------------------------SDVQ-PPAQWLVIQGDADEIVDPQA-VYDWLETL 181 (220)
T ss_dssp --------C-------------------------------------TTCC-CCSSEEEEEETTCSSSCHHH-HHHHHTTC
T ss_pred --------h-------------------------------------hhcc-cCCcEEEEECCCCcccCHHH-HHHHHHHh
Confidence 0 0011 25799999999999999997 88898887
Q ss_pred -CCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 360 -HKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 360 -~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++++++||..+.+ ++++.+.+.+|
T Consensus 182 ~~~~~~~~~~~~~H~~~~~-~~~~~~~i~~~ 211 (220)
T 2fuk_A 182 EQQPTLVRMPDTSHFFHRK-LIDLRGALQHG 211 (220)
T ss_dssp SSCCEEEEETTCCTTCTTC-HHHHHHHHHHH
T ss_pred CcCCcEEEeCCCCceehhh-HHHHHHHHHHH
Confidence 789999999999999884 77888888754
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=172.51 Aligned_cols=166 Identities=16% Similarity=0.189 Sum_probs=131.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEE--eCCCCCCC-----------CHHHHHHH---HHHHHHHhhccC--
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCL--HIPVKDRT-----------SFTGLVKL---VESTVRSESNRS-- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~--Dl~G~G~S-----------s~~~~~~d---l~~~l~~~~~~~-- 192 (709)
+.|+||++||++++...|..+...|+++|.|+++ |++|+|.| +..++.++ +.++++.+....
T Consensus 37 ~~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 116 (226)
T 2h1i_A 37 SKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKF 116 (226)
T ss_dssp TSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5789999999999999999999999889999999 99999976 44555544 444554444444
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
+..+++++|||+||.+|+.+|..+|+.++++|+++|......
T Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------------- 158 (226)
T 2h1i_A 117 DRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------------------- 158 (226)
T ss_dssp CTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------------------------------
T ss_pred CcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------------------------------
Confidence 457899999999999999999999999999999998643210
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
. .....+++|+++++|++|.+++.+. .
T Consensus 159 --------------------~--------------------------------~~~~~~~~p~l~~~G~~D~~~~~~~-~ 185 (226)
T 2h1i_A 159 --------------------M--------------------------------QLANLAGKSVFIAAGTNDPICSSAE-S 185 (226)
T ss_dssp --------------------C--------------------------------CCCCCTTCEEEEEEESSCSSSCHHH-H
T ss_pred --------------------c--------------------------------ccccccCCcEEEEeCCCCCcCCHHH-H
Confidence 0 0112357899999999999999986 8
Q ss_pred HHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 353 ERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 353 ~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
+.+.+.++ ++++ +++++||..+.+.++.+.+.|.+
T Consensus 186 ~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~~ 224 (226)
T 2h1i_A 186 EELKVLLENANANVTM-HWENRGHQLTMGEVEKAKEWYDK 224 (226)
T ss_dssp HHHHHHHHTTTCEEEE-EEESSTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEE-EeCCCCCCCCHHHHHHHHHHHHH
Confidence 88877665 3445 99999999987777777666653
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=169.81 Aligned_cols=169 Identities=13% Similarity=0.113 Sum_probs=135.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc---CCceEEEEeCC-------------------CCCCC------CHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIP-------------------VKDRT------SFTGLVKLVE 182 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~Dl~-------------------G~G~S------s~~~~~~dl~ 182 (709)
+.|+||++||++++...|..+.+.|+ ++|.|+++|+| |+|.+ ++++.++++.
T Consensus 13 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 92 (218)
T 1auo_A 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHHHHHH
Confidence 57899999999999999999999996 79999998766 55654 4677888888
Q ss_pred HHHHHhhcc-CCCCCEEEEEechhHHHHHHHHH-hCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhh
Q 005190 183 STVRSESNR-SPKRPVYLVGESLGACIALAVAA-RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (709)
Q Consensus 183 ~~l~~~~~~-~~~~~v~LvGhS~GG~iAl~~A~-~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (709)
.+++++... .+.++++++|||+||.+|+.+|. ++|+.++++|++++.... ..++.
T Consensus 93 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~------------~~~~~----------- 149 (218)
T 1auo_A 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT------------FGDEL----------- 149 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT------------CCTTC-----------
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC------------chhhh-----------
Confidence 888886541 23458999999999999999999 999999999999985542 00000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
. + ....+++|+++++|
T Consensus 150 -----~--------------------------------------~---------------------~~~~~~~P~l~i~G 165 (218)
T 1auo_A 150 -----E--------------------------------------L---------------------SASQQRIPALCLHG 165 (218)
T ss_dssp -----C--------------------------------------C---------------------CHHHHTCCEEEEEE
T ss_pred -----h--------------------------------------h---------------------hhcccCCCEEEEEe
Confidence 0 0 00235789999999
Q ss_pred CCCCCCCcHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 341 GKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
++|.+++.+. .+.+.+.++ ++++++++ +||..+.+.++++.+.|.+
T Consensus 166 ~~D~~~~~~~-~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 215 (218)
T 1auo_A 166 QYDDVVQNAM-GRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAA 215 (218)
T ss_dssp TTCSSSCHHH-HHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHH
T ss_pred CCCceecHHH-HHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHH
Confidence 9999999997 888887766 48999999 9999999988888887774
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=183.35 Aligned_cols=162 Identities=14% Similarity=0.157 Sum_probs=129.7
Q ss_pred CCCEEEEeCCCCCCcccHH-------HHHHHh-cCCceEEEEeCCCCCCCC-----------------------------
Q 005190 131 DSPLLLFLPGIDGVGLGLI-------RQHQRL-GKIFDIWCLHIPVKDRTS----------------------------- 173 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~-------~~~~~L-~~~~~Vi~~Dl~G~G~Ss----------------------------- 173 (709)
.+++|||+||++.+...|. .+++.| .++|.|+++|+||||.|+
T Consensus 61 ~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 1qlw_A 61 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEA 140 (328)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHH
T ss_pred CCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchhh
Confidence 3567999999999999998 488888 578999999999999992
Q ss_pred ------------------------HHH------------------HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005190 174 ------------------------FTG------------------LVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 174 ------------------------~~~------------------~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~ 211 (709)
+++ +.+++.++++. . .+++|+||||||.+++.
T Consensus 141 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~--~~~~lvGhS~GG~~a~~ 214 (328)
T 1qlw_A 141 AWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK----L--DGTVLLSHSQSGIYPFQ 214 (328)
T ss_dssp HHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH----H--TSEEEEEEGGGTTHHHH
T ss_pred hhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH----h--CCceEEEECcccHHHHH
Confidence 222 45556666655 2 38999999999999999
Q ss_pred HHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhH
Q 005190 212 VAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291 (709)
Q Consensus 212 ~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (709)
+|..+|+.++++|+++|... .
T Consensus 215 ~a~~~p~~v~~~v~~~p~~~---------------------------------~-------------------------- 235 (328)
T 1qlw_A 215 TAAMNPKGITAIVSVEPGEC---------------------------------P-------------------------- 235 (328)
T ss_dssp HHHHCCTTEEEEEEESCSCC---------------------------------C--------------------------
T ss_pred HHHhChhheeEEEEeCCCCC---------------------------------C--------------------------
Confidence 99999999999999987430 0
Q ss_pred HHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCc-----HHHHHHHHhhcC----Cc
Q 005190 292 VALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS-----QEEGERLSSALH----KC 362 (709)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~-----~~~~~~l~~~~~----~~ 362 (709)
.. ......+++|+|+++|++|.++++ +. ++.+.+.++ ++
T Consensus 236 --------------~~-----------------~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~-~~~~~~~l~~~g~~~ 283 (328)
T 1qlw_A 236 --------------KP-----------------EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKA-CHAFIDALNAAGGKG 283 (328)
T ss_dssp --------------CG-----------------GGCGGGTTSCEEEEECSSCTTCTTTHHHHHH-HHHHHHHHHHTTCCE
T ss_pred --------------CH-----------------HHHhhccCCCEEEEeccCCccccchhhHHHH-HHHHHHHHHHhCCCc
Confidence 00 001123579999999999999997 65 777777665 89
Q ss_pred EEEEEcCCC-----ccccccC-hhhHHHHHhhc
Q 005190 363 EPRNFYGHG-----HFLLLED-GVDLVTIIKGA 389 (709)
Q Consensus 363 ~~~~i~~aG-----H~~~le~-p~~~~~~I~~~ 389 (709)
++++++++| |+++.|. ++++++.|.+|
T Consensus 284 ~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~f 316 (328)
T 1qlw_A 284 QLMSLPALGVHGNSHMMMQDRNNLQVADLILDW 316 (328)
T ss_dssp EEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHH
T ss_pred eEEEcCCCCcCCCcccchhccCHHHHHHHHHHH
Confidence 999999766 9999998 99999999965
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-18 Score=176.52 Aligned_cols=203 Identities=15% Similarity=0.093 Sum_probs=136.1
Q ss_pred CCCEEEEeCCC--CCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
++|+|||+||+ +++...|..+.+.|..+|+|+++|+||||.| +++++++++.+.++... +..+++|+|||
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~lvGhS 156 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALPATLTVLVRSLADVVQAEV---ADGEFALAGHS 156 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCEESSHHHHHHHHHHHHHHHH---TTSCEEEEEET
T ss_pred CCCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCCEEEEEEC
Confidence 47889999995 7788999999999999999999999999988 77888888888877632 34689999999
Q ss_pred hhHHHHHHHHHhC---CCceeEEEEecCCCCcchh-hhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccC
Q 005190 204 LGACIALAVAARN---PDIDLVLILVNPATSFNKS-VLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (709)
Q Consensus 204 ~GG~iAl~~A~~~---P~~v~~lVl~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (709)
|||.+|+.+|.++ |+.++++|++++....... ... .+...+.. ..+... ...
T Consensus 157 ~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~---------~~~----- 212 (319)
T 3lcr_A 157 SGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPE---ELFRSALN-------ERFVEY---------LRL----- 212 (319)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHH---HHHHHHHH-------HHHHHH---------HHH-----
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhH---HHHHHHHH-------HHHhhh---------hcc-----
Confidence 9999999999988 8899999999986543221 100 01110000 000000 000
Q ss_pred CchHHHHHHHhHHHhhcchhhhhhcCC--hhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005190 280 LQPTIQDLSQDLVALSSYLPVLADILP--KETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357 (709)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~ 357 (709)
.. +. ...+........... ......+++|+|+|+|++|. +++.. ...+.+
T Consensus 213 ------------~~-----------~~~~~~~l~~~~~~~~~~~---~~~~~~i~~PvLli~g~~~~-~~~~~-~~~~~~ 264 (319)
T 3lcr_A 213 ------------TG-----------GGNLSQRITAQVWCLELLR---GWRPEGLTAPTLYVRPAQPL-VEQEK-PEWRGD 264 (319)
T ss_dssp ------------HC-----------CCCHHHHHHHHHHHHHHTT---TCCCCCCSSCEEEEEESSCS-SSCCC-THHHHH
T ss_pred ------------cC-----------CCchhHHHHHHHHHHHHHh---cCCCCCcCCCEEEEEeCCCC-CCccc-chhhhh
Confidence 00 00 000000001111010 11226789999999999854 44443 566666
Q ss_pred hcCC-cEEEEEcCCCcccccc--ChhhHHHHHhhc
Q 005190 358 ALHK-CEPRNFYGHGHFLLLE--DGVDLVTIIKGA 389 (709)
Q Consensus 358 ~~~~-~~~~~i~~aGH~~~le--~p~~~~~~I~~~ 389 (709)
.+++ .+++++++ ||+.+++ +|+++++.|.+|
T Consensus 265 ~~~~~~~~~~~~g-~H~~~~~~~~~~~va~~i~~f 298 (319)
T 3lcr_A 265 VLAAMGQVVEAPG-DHFTIIEGEHVASTAHIVGDW 298 (319)
T ss_dssp HHHTCSEEEEESS-CTTGGGSTTTHHHHHHHHHHH
T ss_pred cCCCCceEEEeCC-CcHHhhCcccHHHHHHHHHHH
Confidence 6654 77777775 8888886 999999999955
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-19 Score=190.10 Aligned_cols=224 Identities=8% Similarity=0.033 Sum_probs=142.2
Q ss_pred CCCEEEEeCCCCCCcccHHHHH--HHhcCCceEEEEeCCCCCCCC------HHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQH--QRLGKIFDIWCLHIPVKDRTS------FTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~--~~L~~~~~Vi~~Dl~G~G~Ss------~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
..|+||++||++++...|.... ..+..+|.|+++|+||||.|. ..++.+|+.++++.+.... .+++|+||
T Consensus 158 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v~l~G~ 235 (405)
T 3fnb_A 158 AQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT--EKIAIAGF 235 (405)
T ss_dssp CCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS--SCEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC--CCEEEEEE
Confidence 3589999999999999987765 445799999999999999982 2356888999998865543 68999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCch
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (709)
|+||.+++.+|..+| +++++|+++|.............. ....+..... .... . ... ...
T Consensus 236 S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~-~~~~p~~~~~---~~~~-~------------~~~--~~~ 295 (405)
T 3fnb_A 236 SGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFST-ALKAPKTILK---WGSK-L------------VTS--VNK 295 (405)
T ss_dssp TTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-----------------------------------C--CCH
T ss_pred ChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhh-hhhCcHHHHH---HHHH-H------------hhc--cch
Confidence 999999999999999 899999999866542211100000 0000100000 0000 0 000 000
Q ss_pred HHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC--
Q 005190 283 TIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-- 360 (709)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-- 360 (709)
........... .+...........+.. ......+.++++|+|+++|++|.+++.+. +..+.+.++
T Consensus 296 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~l~~~ 362 (405)
T 3fnb_A 296 VAEVNLNKYAW----------QFGQVDFITSVNEVLE--QAQIVDYNKIDVPSLFLVGAGEDSELMRQ-SQVLYDNFKQR 362 (405)
T ss_dssp HHHHHHHHHHH----------HHTSSSHHHHHHHHHH--HCCCCCGGGCCSCEEEEEETTSCHHHHHH-HHHHHHHHHHT
T ss_pred hHHHHHHHhhh----------hcCCCCHHHHHHHHHH--hhcccCHhhCCCCEEEEecCCCcCCChHH-HHHHHHHhccC
Confidence 00000000000 0011111111111110 01112267899999999999999999886 888887664
Q ss_pred --CcEEEEE---cCCCccccccChhhHHHHHhhc
Q 005190 361 --KCEPRNF---YGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 --~~~~~~i---~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++ +++||.++.++++.+.+.|.+|
T Consensus 363 ~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~f 396 (405)
T 3fnb_A 363 GIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEW 396 (405)
T ss_dssp TCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHH
T ss_pred CCCceEEEEcCCccchhccccchHHHHHHHHHHH
Confidence 5679999 7778889999999999999966
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=182.49 Aligned_cols=201 Identities=15% Similarity=0.128 Sum_probs=136.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCC---------------------------HHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS---------------------------FTGLVKLVES 183 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss---------------------------~~~~~~dl~~ 183 (709)
..|+||++||++++...|..+...++.||.|+++|+||+|.|+ +..+.+|+..
T Consensus 107 ~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~ 186 (346)
T 3fcy_A 107 KHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQ 186 (346)
T ss_dssp CEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHH
T ss_pred CcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHH
Confidence 4789999999999999999888777899999999999999872 2356788888
Q ss_pred HHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhc-hhhhHHhHHHhhh
Q 005190 184 TVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQITTMLSSTLS 260 (709)
Q Consensus 184 ~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 260 (709)
+++.+.... +..+++++|||+||.+|+.+|..+|+ ++++|+++|........ +... .......+..++.
T Consensus 187 a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 258 (346)
T 3fcy_A 187 LAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKRV-------WDLDLAKNAYQEITDYFR 258 (346)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHHH-------HHTTCCCGGGHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHHH-------hhccccccchHHHHHHHH
Confidence 888776543 24689999999999999999999998 99999998854321111 0000 0000000000000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
... .......... ..+ ...+....+.++++|+|+++|
T Consensus 259 ~~~---------------~~~~~~~~~~--------------------------~~~--~~~d~~~~~~~i~~P~lii~G 295 (346)
T 3fcy_A 259 LFD---------------PRHERENEVF--------------------------TKL--GYIDVKNLAKRIKGDVLMCVG 295 (346)
T ss_dssp HHC---------------TTCTTHHHHH--------------------------HHH--GGGCHHHHGGGCCSEEEEEEE
T ss_pred hcC---------------CCcchHHHHH--------------------------HHh--CcccHHHHHHhcCCCEEEEee
Confidence 000 0000000000 000 001122445788999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 341 GKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
++|.+++++. +..+.+.++ ++++++++++||..+ +++.+.+.
T Consensus 296 ~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~ 338 (346)
T 3fcy_A 296 LMDQVCPPST-VFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAM 338 (346)
T ss_dssp TTCSSSCHHH-HHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHH
T ss_pred CCCCcCCHHH-HHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHH
Confidence 9999999996 888888777 689999999999998 34455555
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-18 Score=178.20 Aligned_cols=163 Identities=12% Similarity=0.135 Sum_probs=133.1
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc--------CCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR--------SPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~--------~~~~~v~LvG 201 (709)
..|+||++||++++...|..+.+.|+ +||.|+++|++|+|.|... ..+|+.+.++.+... .+..+++++|
T Consensus 95 ~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~-~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G 173 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS-RARQLNAALDYMLTDASSAVRNRIDASRLAVMG 173 (306)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH-HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEE
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch-HHHHHHHHHHHHHhhcchhhhccCCcccEEEEE
Confidence 47789999999999999999999995 6899999999999998432 224455555554443 2346899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
||+||.+++.+|..+|+ ++++|+++|...
T Consensus 174 ~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------------------------------------------- 202 (306)
T 3vis_A 174 HSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------------------------------------------- 202 (306)
T ss_dssp ETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------------------------------
T ss_pred EChhHHHHHHHHhhCCC-eeEEEEeccccC--------------------------------------------------
Confidence 99999999999999998 889999887322
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcH-HHHHHHHhhcC
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ-EEGERLSSALH 360 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~-~~~~~l~~~~~ 360 (709)
...+.++++|+++++|++|.+++.+ . .+.+.+.++
T Consensus 203 -------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~-~~~~~~~l~ 238 (306)
T 3vis_A 203 -------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLH-SKPFYNSIP 238 (306)
T ss_dssp -------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTT-HHHHHHTCC
T ss_pred -------------------------------------------ccccccCCCCEEEEecCCCcccCcchh-HHHHHHHhc
Confidence 0223567899999999999999988 5 778888776
Q ss_pred C---cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 K---CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~---~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+ .++++++++||+.+.++++++.+.+.+|
T Consensus 239 ~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~f 270 (306)
T 3vis_A 239 SPTDKAYLELDGASHFAPNITNKTIGMYSVAW 270 (306)
T ss_dssp TTSCEEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred cCCCceEEEECCCCccchhhchhHHHHHHHHH
Confidence 4 6799999999999999999999999865
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=168.89 Aligned_cols=185 Identities=15% Similarity=0.126 Sum_probs=118.4
Q ss_pred CEEEEeCCCCCCcccHH--HHHHHh---cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 133 PLLLFLPGIDGVGLGLI--RQHQRL---GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~--~~~~~L---~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
|+|||+||+.++...+. .+.+.+ ..+++|+++|+||||. +..+++..+++. ...++++|+||||||.
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~----~~~~~l~~~~~~----~~~~~i~l~G~SmGG~ 74 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA----EAAEMLESIVMD----KAGQSIGIVGSSLGGY 74 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH----HHHHHHHHHHHH----HTTSCEEEEEETHHHH
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH----HHHHHHHHHHHh----cCCCcEEEEEEChhhH
Confidence 78999999998887653 233444 3569999999999984 455556666655 3467899999999999
Q ss_pred HHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHH
Q 005190 208 IALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL 287 (709)
Q Consensus 208 iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (709)
+|+.+|.++|+.+..++...+... ........ .......... ......
T Consensus 75 ~a~~~a~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-------~~~~~~~~~~--------------~~~~~~ 122 (202)
T 4fle_A 75 FATWLSQRFSIPAVVVNPAVRPFE-----------LLSDYLGE-------NQNPYTGQKY--------------VLESRH 122 (202)
T ss_dssp HHHHHHHHTTCCEEEESCCSSHHH-----------HGGGGCEE-------EECTTTCCEE--------------EECHHH
T ss_pred HHHHHHHHhcccchheeeccchHH-----------HHHHhhhh-------hccccccccc--------------cchHHH
Confidence 999999999988765554432100 00000000 0000000000 000000
Q ss_pred HHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEE
Q 005190 288 SQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 367 (709)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i 367 (709)
..+ .........++++|+|+|+|++|.++|.+. +.++ ++++++.++
T Consensus 123 ~~~------------------------------~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~-s~~l---~~~~~l~i~ 168 (202)
T 4fle_A 123 IYD------------------------------LKAMQIEKLESPDLLWLLQQTGDEVLDYRQ-AVAY---YTPCRQTVE 168 (202)
T ss_dssp HHH------------------------------HHTTCCSSCSCGGGEEEEEETTCSSSCHHH-HHHH---TTTSEEEEE
T ss_pred HHH------------------------------HHhhhhhhhccCceEEEEEeCCCCCCCHHH-HHHH---hhCCEEEEE
Confidence 000 001113446789999999999999999986 6655 468999999
Q ss_pred cCCCccccccChhhHHHHHhhccccccc
Q 005190 368 YGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 368 ~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
+|+||.+ ++++++.+.|. .|+.-.
T Consensus 169 ~g~~H~~--~~~~~~~~~I~--~FL~~a 192 (202)
T 4fle_A 169 SGGNHAF--VGFDHYFSPIV--TFLGLA 192 (202)
T ss_dssp SSCCTTC--TTGGGGHHHHH--HHHTCC
T ss_pred CCCCcCC--CCHHHHHHHHH--HHHhhh
Confidence 9999963 56677777777 465543
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.6e-18 Score=175.65 Aligned_cols=200 Identities=15% Similarity=0.174 Sum_probs=134.5
Q ss_pred CCCEEEEeCCCCCCc--ccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGIDGVG--LGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~--~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
++|+|||+||++++. ..|..+...|..+|+|+++|+||||.| +++++++++.+.+.. ..+..+++|+|||
T Consensus 66 ~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~a~~~~~~l~~---~~~~~~~~LvGhS 142 (300)
T 1kez_A 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIR---TQGDKPFVVAGHS 142 (300)
T ss_dssp CSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCBCSSHHHHHHHHHHHHHH---HCSSCCEEEECCT
T ss_pred CCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCCEEEEEEC
Confidence 478999999999987 999999999988899999999999998 778888887743322 2556789999999
Q ss_pred hhHHHHHHHHHhCC---CceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 204 LGACIALAVAARNP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 204 ~GG~iAl~~A~~~P---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
|||.+|+.+|.++| +.++++|++++......... ..+. ......+..... ...
T Consensus 143 ~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~---~~~~-----------~~~~~~~~~~~~----------~~~ 198 (300)
T 1kez_A 143 AGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAM---NAWL-----------EELTATLFDRET----------VRM 198 (300)
T ss_dssp HHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHH---HHHH-----------HHHHGGGCCCCS----------SCC
T ss_pred HhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHH---HHHH-----------HHHHHHHHhCcC----------Ccc
Confidence 99999999999998 48999999998654322110 0000 001111111000 000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
... .. ..+...... .. ...+..+++|+|+|+|+ |..+++.. ..+.+..+
T Consensus 199 ~~~---~~-------------------~~~~~~~~~---~~---~~~~~~i~~P~lii~G~-d~~~~~~~--~~~~~~~~ 247 (300)
T 1kez_A 199 DDT---RL-------------------TALGAYDRL---TG---QWRPRETGLPTLLVSAG-EPMGPWPD--DSWKPTWP 247 (300)
T ss_dssp CHH---HH-------------------HHHHHHHHH---TT---TCCCCCCSCCBEEEEES-SCSSCCCS--SCCSCCCS
T ss_pred chH---HH-------------------HHHHHHHHH---Hh---cCCCCCCCCCEEEEEeC-CCCCCCcc--cchhhhcC
Confidence 000 00 000000000 00 11347789999999995 55555543 23555555
Q ss_pred -CcEEEEEcCCCccccc-cChhhHHHHHhhc
Q 005190 361 -KCEPRNFYGHGHFLLL-EDGVDLVTIIKGA 389 (709)
Q Consensus 361 -~~~~~~i~~aGH~~~l-e~p~~~~~~I~~~ 389 (709)
+++++++++ ||+.++ |+|+++++.|.+|
T Consensus 248 ~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~f 277 (300)
T 1kez_A 248 FEHDTVAVPG-DHFTMVQEHADAIARHIDAW 277 (300)
T ss_dssp SCCEEEEESS-CTTTSSSSCSHHHHHHHHHH
T ss_pred CCCeEEEecC-CChhhccccHHHHHHHHHHH
Confidence 579999999 999997 8999999999954
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=165.39 Aligned_cols=163 Identities=17% Similarity=0.152 Sum_probs=124.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-----C-------------HHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-----S-------------FTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-----s-------------~~~~~~dl~~~l~~~~~~ 191 (709)
..|+||++||++++...|..+++.| .+||.|+++|++|+|.+ + .++..+|+.++++.+...
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 110 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARH 110 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhc
Confidence 3679999999999999999999999 58899999999999776 1 246688999999987765
Q ss_pred CC-CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhH
Q 005190 192 SP-KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (709)
Q Consensus 192 ~~-~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (709)
.. ..+++++||||||.+++.+|..+|+ +.++|++.+.........
T Consensus 111 ~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~~--------------------------------- 156 (241)
T 3f67_A 111 GGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSLN--------------------------------- 156 (241)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCSS---------------------------------
T ss_pred cCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCccC---------------------------------
Confidence 31 4689999999999999999999998 556666544221100000
Q ss_pred HHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH
Q 005190 271 MDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~ 350 (709)
.... ....+.++++|+|+++|++|.+++.+.
T Consensus 157 ----------------------------------~~~~---------------~~~~~~~~~~P~l~~~g~~D~~~~~~~ 187 (241)
T 3f67_A 157 ----------------------------------SPKH---------------PVDIAVDLNAPVLGLYGAKDASIPQDT 187 (241)
T ss_dssp ----------------------------------SCCC---------------HHHHGGGCCSCEEEEEETTCTTSCHHH
T ss_pred ----------------------------------CccC---------------HHHhhhhcCCCEEEEEecCCCCCCHHH
Confidence 0000 002235678999999999999999986
Q ss_pred HHHHHHhhc----CCcEEEEEcCCCcccccc
Q 005190 351 EGERLSSAL----HKCEPRNFYGHGHFLLLE 377 (709)
Q Consensus 351 ~~~~l~~~~----~~~~~~~i~~aGH~~~le 377 (709)
.+.+.+.+ +++++++++++||.+..+
T Consensus 188 -~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 217 (241)
T 3f67_A 188 -VETMRQALRAANATAEIVVYPEADHAFNAD 217 (241)
T ss_dssp -HHHHHHHHHHTTCSEEEEEETTCCTTTTCT
T ss_pred -HHHHHHHHHHcCCCcEEEEECCCCcceecC
Confidence 77777765 689999999999998754
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=162.17 Aligned_cols=164 Identities=16% Similarity=0.129 Sum_probs=126.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEe-------------CCCCCCC--------CHHHHHHHHHHHHHHhh
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLH-------------IPVKDRT--------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D-------------l~G~G~S--------s~~~~~~dl~~~l~~~~ 189 (709)
+.| ||++||++++...|..+.+.|..++.|+++| ++|+|.+ ++.+.++++.++++.+.
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLA 94 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 577 9999999999999999999999999999999 8888875 23445556666666654
Q ss_pred ccCCC--CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 190 NRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 190 ~~~~~--~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
...+. ++++|+||||||.+|+.+|.++|+.++++|++++.......
T Consensus 95 ~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------------------- 142 (209)
T 3og9_A 95 EKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------------------------- 142 (209)
T ss_dssp HHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------------------------
T ss_pred HhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------------------------
Confidence 44433 78999999999999999999999999999999874331000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 347 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~ 347 (709)
......++|+++++|++|.+++
T Consensus 143 ----------------------------------------------------------~~~~~~~~p~li~~G~~D~~v~ 164 (209)
T 3og9_A 143 ----------------------------------------------------------QTVQLDDKHVFLSYAPNDMIVP 164 (209)
T ss_dssp ----------------------------------------------------------CCCCCTTCEEEEEECTTCSSSC
T ss_pred ----------------------------------------------------------ccccccCCCEEEEcCCCCCccC
Confidence 0013457899999999999999
Q ss_pred cHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 348 SQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 348 ~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
.+. ++.+.+.++ .+++++++ +||.+..+..+++.+.|.
T Consensus 165 ~~~-~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l~ 206 (209)
T 3og9_A 165 QKN-FGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWLT 206 (209)
T ss_dssp HHH-HHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHHH
Confidence 986 777766544 36777777 799997666666665554
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=171.63 Aligned_cols=179 Identities=15% Similarity=0.090 Sum_probs=129.1
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc-CCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccC-----CCCCEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRS-----PKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~-----~~~~v~L 199 (709)
+.|+||++||.+ ++...|..++..|+ .+|.|+++|+||+|.+ ++....+|+.++++.+.... ...+++|
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 128 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITP 128 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccCchhHHHHHHHHHHHHHHHHHHhCCCcccEEE
Confidence 578999999944 55567888999995 6899999999999998 77777888888777766532 2358999
Q ss_pred EEechhHHHHHHHHHhCCCc-------------eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 200 VGESLGACIALAVAARNPDI-------------DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~-------------v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
+||||||.+|+.+|..+|+. ++++|+++|......... ... ..+....+
T Consensus 129 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~-----------~~~-----~~~~~~~~-- 190 (283)
T 3bjr_A 129 AGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFP-----------KDD-----ATLATWTP-- 190 (283)
T ss_dssp EEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC------------------------CCCC--
T ss_pred EEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccc-----------ccc-----chHHHHHH--
Confidence 99999999999999999987 899999988654211100 000 00000000
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
.. ........+.++.+|+|+++|++|.++
T Consensus 191 -----------------------~~----------------------------~~~~~~~~~~~~~~P~lii~G~~D~~~ 219 (283)
T 3bjr_A 191 -----------------------TP----------------------------NELAADQHVNSDNQPTFIWTTADDPIV 219 (283)
T ss_dssp -----------------------CG----------------------------GGGCGGGSCCTTCCCEEEEEESCCTTS
T ss_pred -----------------------Hh----------------------------HhcCHHHhccCCCCCEEEEEcCCCCCC
Confidence 00 000011334677899999999999999
Q ss_pred CcHHHHHHHHhhcC----CcEEEEEcCCCccccccCh
Q 005190 347 PSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 347 ~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p 379 (709)
+.+. +..+.+.++ ++++++++++||.+..+.+
T Consensus 220 p~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 255 (283)
T 3bjr_A 220 PATN-TLAYATALATAKIPYELHVFKHGPHGLALANA 255 (283)
T ss_dssp CTHH-HHHHHHHHHHTTCCEEEEEECCCSHHHHHHHH
T ss_pred ChHH-HHHHHHHHHHCCCCeEEEEeCCCCcccccccc
Confidence 9886 777777654 4699999999998887765
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-17 Score=175.76 Aligned_cols=197 Identities=13% Similarity=0.036 Sum_probs=133.4
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
+.|+||++||++++...|......| .+||.|+++|+||+|.| ++.+.+.++.+++.... ....++++|+|
T Consensus 151 ~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~i~l~G 229 (386)
T 2jbw_A 151 PHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLE-AIRNDAIGVLG 229 (386)
T ss_dssp CEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCT-TEEEEEEEEEE
T ss_pred CCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCccHHHHHHHHHHHHHhCC-CcCcccEEEEE
Confidence 4678999999999888776667776 58999999999999987 33444555555554411 12346899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
||+||.+++.+|.. |++++++|++ +......... ..+.... .......+.
T Consensus 230 ~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~--------~~~~~~~----~~~~~~~g~---------------- 279 (386)
T 2jbw_A 230 RSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD--------LETPLTK----ESWKYVSKV---------------- 279 (386)
T ss_dssp ETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG--------GSCHHHH----HHHHHHTTC----------------
T ss_pred EChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH--------hccHHHH----HHHHHHhCC----------------
Confidence 99999999999999 8999999999 7554322110 0000000 000000000
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHH-HHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc-
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKI-ELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL- 359 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~- 359 (709)
....... ..+.. ......+.++++|+|+++|++|. ++.+. ++.+.+.+
T Consensus 280 --------------------------~~~~~~~~~~~~~--~~~~~~~~~i~~P~Lii~G~~D~-v~~~~-~~~l~~~l~ 329 (386)
T 2jbw_A 280 --------------------------DTLEEARLHVHAA--LETRDVLSQIACPTYILHGVHDE-VPLSF-VDTVLELVP 329 (386)
T ss_dssp --------------------------SSHHHHHHHHHHH--TCCTTTGGGCCSCEEEEEETTSS-SCTHH-HHHHHHHSC
T ss_pred --------------------------CCHHHHHHHHHHh--CChhhhhcccCCCEEEEECCCCC-CCHHH-HHHHHHHhc
Confidence 0000000 01110 11123567889999999999999 89886 89999888
Q ss_pred C-CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 360 H-KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 360 ~-~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+ ++++++++++||.. .++++++.+.|.+|
T Consensus 330 ~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~f 359 (386)
T 2jbw_A 330 AEHLNLVVEKDGDHCC-HNLGIRPRLEMADW 359 (386)
T ss_dssp GGGEEEEEETTCCGGG-GGGTTHHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCC-ccchHHHHHHHHHH
Confidence 7 89999999999965 67888888888855
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-17 Score=167.60 Aligned_cols=180 Identities=14% Similarity=0.135 Sum_probs=131.7
Q ss_pred CCCCEEEEeCCC---CCCcccHHHHHHHhc-CCceEEEEeCCCCCCC----CHHHHHHHHHHHHHHhhccC-----CCCC
Q 005190 130 RDSPLLLFLPGI---DGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS-----PKRP 196 (709)
Q Consensus 130 ~~~p~Vv~lHG~---~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S----s~~~~~~dl~~~l~~~~~~~-----~~~~ 196 (709)
...|+||++||. .++...|..++..|+ .||.|+++|+||+|.| ++....+|+.++++.+.... +..+
T Consensus 41 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 120 (276)
T 3hxk_A 41 YTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQ 120 (276)
T ss_dssp CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCTHHHHHHHHHHHHHHHHHHTTTTTBCTTC
T ss_pred CCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCCcCchHHHHHHHHHHHHHHhHHHcCCCcce
Confidence 357899999993 466677888888884 8999999999999994 77888888888888877653 3468
Q ss_pred EEEEEechhHHHHHHHHHh-CCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHh
Q 005190 197 VYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVA 275 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~-~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (709)
++|+||||||.+|+.+|.. .+..++++|+++|....... .... .. . ..+.
T Consensus 121 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~-~~~~-------~~--------~-~~~~------------ 171 (276)
T 3hxk_A 121 VFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG-WPSD-------LS--------H-FNFE------------ 171 (276)
T ss_dssp CEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS-CSSS-------SS--------S-SCCC------------
T ss_pred EEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh-CCcc-------hh--------h-hhcC------------
Confidence 9999999999999999998 78999999999886553221 0000 00 0 0000
Q ss_pred hccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005190 276 KRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 355 (709)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l 355 (709)
..+. .. ......+.++.+|+|+++|++|.++|.+. +..+
T Consensus 172 ----~~~~-----~~-------------------------------~~~~~~~~~~~~P~lii~G~~D~~vp~~~-~~~~ 210 (276)
T 3hxk_A 172 ----IENI-----SE-------------------------------YNISEKVTSSTPPTFIWHTADDEGVPIYN-SLKY 210 (276)
T ss_dssp ----CSCC-----GG-------------------------------GBTTTTCCTTSCCEEEEEETTCSSSCTHH-HHHH
T ss_pred ----chhh-----hh-------------------------------CChhhccccCCCCEEEEecCCCceeChHH-HHHH
Confidence 0000 00 00113346778999999999999999986 7777
Q ss_pred HhhcC----CcEEEEEcCCCccccccCh
Q 005190 356 SSALH----KCEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 356 ~~~~~----~~~~~~i~~aGH~~~le~p 379 (709)
.+.++ ++++++++++||......+
T Consensus 211 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 238 (276)
T 3hxk_A 211 CDRLSKHQVPFEAHFFESGPHGVSLANR 238 (276)
T ss_dssp HHHHHTTTCCEEEEEESCCCTTCTTCST
T ss_pred HHHHHHcCCCeEEEEECCCCCCccccCc
Confidence 66543 4699999999998887665
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=162.39 Aligned_cols=164 Identities=14% Similarity=0.131 Sum_probs=128.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCC---CC-------------CHHHHHHHHHHHHHHhhccC--
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKD---RT-------------SFTGLVKLVESTVRSESNRS-- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G---~S-------------s~~~~~~dl~~~l~~~~~~~-- 192 (709)
.+|+|||+||++++...|..+.+.|+++|.|+++|.+++. .+ ++.+.++++.++++.+....
T Consensus 29 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 108 (223)
T 3b5e_A 29 SRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGL 108 (223)
T ss_dssp CCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999889999999987631 11 34556677777777765543
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
+.++++|+||||||.+|+.+|.++|+.++++|++++...... .
T Consensus 109 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------~------ 151 (223)
T 3b5e_A 109 NLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-------------------------------V------ 151 (223)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-------------------------------C------
T ss_pred CCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-------------------------------c------
Confidence 347899999999999999999999999999999988543200 0
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
.....+++|+++++|++|.+++.+. .
T Consensus 152 -----------------------------------------------------~~~~~~~~P~li~~G~~D~~v~~~~-~ 177 (223)
T 3b5e_A 152 -----------------------------------------------------PATDLAGIRTLIIAGAADETYGPFV-P 177 (223)
T ss_dssp -----------------------------------------------------CCCCCTTCEEEEEEETTCTTTGGGH-H
T ss_pred -----------------------------------------------------ccccccCCCEEEEeCCCCCcCCHHH-H
Confidence 0012357899999999999999986 7
Q ss_pred HHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHh
Q 005190 353 ERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 387 (709)
Q Consensus 353 ~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~ 387 (709)
+ +.+.++ ++++++++ +||.+..+..+.+.+.|.
T Consensus 178 ~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~ 214 (223)
T 3b5e_A 178 A-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWLA 214 (223)
T ss_dssp H-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHHH
T ss_pred H-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHHH
Confidence 7 776655 58899999 999998776665555554
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-16 Score=163.70 Aligned_cols=192 Identities=14% Similarity=0.066 Sum_probs=127.9
Q ss_pred CCCEEEEeCCCCCC-cccHHHHHHHhcCCceEEEEeCCCCCCCC-------------------------HHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGV-GLGLIRQHQRLGKIFDIWCLHIPVKDRTS-------------------------FTGLVKLVEST 184 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s-~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss-------------------------~~~~~~dl~~~ 184 (709)
..|+||++||++++ ...|.........+|.|+++|+||+|.|+ +....+|+.++
T Consensus 81 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 160 (318)
T 1l7a_A 81 PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHH
T ss_pred CccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHH
Confidence 46789999999999 88888776444689999999999999883 24678899999
Q ss_pred HHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhh
Q 005190 185 VRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 185 l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
++.+..... ..+++++|||+||.+|+.+|..+|+ +.++|+++|........ ...............+...
T Consensus 161 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 232 (318)
T 1l7a_A 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA-------IDVALEQPYLEINSFFRRN 232 (318)
T ss_dssp HHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH-------HHHCCSTTTTHHHHHHHHS
T ss_pred HHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHH-------HhcCCcCccHHHHHHHhcc
Confidence 988876532 3689999999999999999999987 66788877753311100 0000000000000000000
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
.......... .... .......+.++++|+|+++|++
T Consensus 233 ----------------~~~~~~~~~~--------------------------~~~~--~~~~~~~~~~~~~P~li~~g~~ 268 (318)
T 1l7a_A 233 ----------------GSPETEVQAM--------------------------KTLS--YFDIMNLADRVKVPVLMSIGLI 268 (318)
T ss_dssp ----------------CCHHHHHHHH--------------------------HHHH--TTCHHHHGGGCCSCEEEEEETT
T ss_pred ----------------CCcccHHHHH--------------------------Hhhc--cccHHHHHhhCCCCEEEEeccC
Confidence 0000000000 0000 0011234567889999999999
Q ss_pred CCCCCcHHHHHHHHhhcCC-cEEEEEcCCCcccc
Q 005190 343 DQLMPSQEEGERLSSALHK-CEPRNFYGHGHFLL 375 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~-~~~~~i~~aGH~~~ 375 (709)
|.+++.+. ...+.+.+++ +++++++++||...
T Consensus 269 D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~H~~~ 301 (318)
T 1l7a_A 269 DKVTPPST-VFAAYNHLETKKELKVYRYFGHEYI 301 (318)
T ss_dssp CSSSCHHH-HHHHHHHCCSSEEEEEETTCCSSCC
T ss_pred CCCCCccc-HHHHHhhcCCCeeEEEccCCCCCCc
Confidence 99999986 8888888774 89999999999944
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.8e-17 Score=164.10 Aligned_cols=178 Identities=15% Similarity=0.160 Sum_probs=118.6
Q ss_pred CCCEEEEeCC---CCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhcc-----CCCCCEEE
Q 005190 131 DSPLLLFLPG---IDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNR-----SPKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG---~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~-----~~~~~v~L 199 (709)
..|+||++|| ..++...|..++..|+ .+|.|+++|+||||.+ ++....+|+.+.++.+... ....+++|
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 113 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIIL 113 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCCCTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCccCchHHHHHHHHHHHHHhhhhhcCCChhheEE
Confidence 5778999999 6677788999999985 7899999999997743 5556666766666665543 22358999
Q ss_pred EEechhHHHHHHHHHhC--------------CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 200 VGESLGACIALAVAARN--------------PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~--------------P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
+||||||.+|+.+|..+ +..++++|+++|........ ... . .. .
T Consensus 114 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~-----------~~~--~---~~-~----- 171 (277)
T 3bxp_A 114 AGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGF-----------PTT--S---AA-R----- 171 (277)
T ss_dssp EEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSS-----------SSS--H---HH-H-----
T ss_pred EEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCC-----------CCc--c---cc-c-----
Confidence 99999999999999985 77899999999865421110 000 0 00 0
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
..+.... ........+..+.+|+|+++|++|.+
T Consensus 172 -------------------~~~~~~~----------------------------~~~~~~~~~~~~~~P~lii~G~~D~~ 204 (277)
T 3bxp_A 172 -------------------NQITTDA----------------------------RLWAAQRLVTPASKPAFVWQTATDES 204 (277)
T ss_dssp -------------------HHHCSCG----------------------------GGSBGGGGCCTTSCCEEEEECTTCCC
T ss_pred -------------------hhccchh----------------------------hhcCHhhccccCCCCEEEEeeCCCCc
Confidence 0000000 00001123456788999999999999
Q ss_pred CCcHHHHHHHHhhcC----CcEEEEEcCCCccccccC
Q 005190 346 MPSQEEGERLSSALH----KCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 346 v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~ 378 (709)
+|.+. +..+.+.++ ++++++++++||......
T Consensus 205 vp~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 240 (277)
T 3bxp_A 205 VPPIN-SLKYVQAMLQHQVATAYHLFGSGIHGLALAN 240 (277)
T ss_dssp SCTHH-HHHHHHHHHHTTCCEEEEECCCC--------
T ss_pred cChHH-HHHHHHHHHHCCCeEEEEEeCCCCccccccc
Confidence 99886 777766543 569999999999665554
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=169.39 Aligned_cols=98 Identities=10% Similarity=-0.039 Sum_probs=84.5
Q ss_pred CCCEEEEeCCCCCCcccHHH-HHHHhc-CCceEEEEeCCCCCCCC--------HHHHHHHHHHHHHHhhccC--CCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIR-QHQRLG-KIFDIWCLHIPVKDRTS--------FTGLVKLVESTVRSESNRS--PKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~-~~~~L~-~~~~Vi~~Dl~G~G~Ss--------~~~~~~dl~~~l~~~~~~~--~~~~v~ 198 (709)
..|+||++||++++...|.. +...|+ +||.|+++|+||+|.|+ .....+|+.++++.+.... +..+++
T Consensus 95 ~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~ 174 (367)
T 2hdw_A 95 RLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIG 174 (367)
T ss_dssp CEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEE
Confidence 46789999999999988875 788884 78999999999999882 5678899999999887653 246899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
++|||+||.+++.+|..+| .++++|+++|.
T Consensus 175 l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 175 VIGICGWGGMALNAVAVDK-RVKAVVTSTMY 204 (367)
T ss_dssp EEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred EEEECHHHHHHHHHHhcCC-CccEEEEeccc
Confidence 9999999999999999998 58999999874
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.3e-17 Score=162.79 Aligned_cols=169 Identities=10% Similarity=-0.002 Sum_probs=124.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-CHHHHHHHHHHHHHH----hhccCCCCCEEEEEech
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-SFTGLVKLVESTVRS----ESNRSPKRPVYLVGESL 204 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~----~~~~~~~~~v~LvGhS~ 204 (709)
..|+|||+||++++...|..+++.|+ +||.|+++|+||.+.. +.....+.+.+.... +....+.++++|+||||
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~ 127 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQ 127 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCTTSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEH
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCccHHHHHHHHHHHHhcccccccccccccCccceEEEEECh
Confidence 46789999999999999999999995 6899999999975332 222333333333220 11122346899999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHH
Q 005190 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (709)
Q Consensus 205 GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (709)
||.+++.+| .++.++++|+++|.... . .
T Consensus 128 GG~~a~~~a--~~~~v~~~v~~~~~~~~--------------~------------------~------------------ 155 (258)
T 2fx5_A 128 GGGGSIMAG--QDTRVRTTAPIQPYTLG--------------L------------------G------------------ 155 (258)
T ss_dssp HHHHHHHHT--TSTTCCEEEEEEECCSS--------------T------------------T------------------
T ss_pred HHHHHHHhc--cCcCeEEEEEecCcccc--------------c------------------c------------------
Confidence 999999888 56789999998763210 0 0
Q ss_pred HHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc-CCcE
Q 005190 285 QDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCE 363 (709)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~-~~~~ 363 (709)
.. ...+.++++|+|+++|++|.+++.+...+.+.+.. .+++
T Consensus 156 --------------------~~------------------~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 197 (258)
T 2fx5_A 156 --------------------HD------------------SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVF 197 (258)
T ss_dssp --------------------CC------------------GGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEE
T ss_pred --------------------cc------------------hhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeE
Confidence 00 02246788999999999999999873255666553 3589
Q ss_pred EEEEcCCCccccccChhhHHHHHhhc
Q 005190 364 PRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 364 ~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++++++||+.+.++++++.+.|.+|
T Consensus 198 ~~~~~g~~H~~~~~~~~~~~~~i~~f 223 (258)
T 2fx5_A 198 WGERRYVSHFEPVGSGGAYRGPSTAW 223 (258)
T ss_dssp EEEESSCCTTSSTTTCGGGHHHHHHH
T ss_pred EEEECCCCCccccchHHHHHHHHHHH
Confidence 99999999999999999999999965
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=158.44 Aligned_cols=171 Identities=20% Similarity=0.176 Sum_probs=128.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC------CceEEEEeCCCC-------------------CCC------CHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK------IFDIWCLHIPVK-------------------DRT------SFTGLVK 179 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~------~~~Vi~~Dl~G~-------------------G~S------s~~~~~~ 179 (709)
..|+|||+||++++...|..+...|.. ++.|+++|.+++ +.+ +++++.+
T Consensus 22 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 101 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQ 101 (239)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHHH
T ss_pred CCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHHH
Confidence 578999999999999999999998853 599999887643 222 4567777
Q ss_pred HHHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHh
Q 005190 180 LVESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (709)
Q Consensus 180 dl~~~l~~~~~~-~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (709)
++..+++..... .+..+++|+||||||.+|+.+|.++|+.++++|++++........
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~---------------------- 159 (239)
T 3u0v_A 102 VLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAV---------------------- 159 (239)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHH----------------------
T ss_pred HHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHH----------------------
Confidence 888887765432 245789999999999999999999999999999998854321100
Q ss_pred hhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCcc-EEE
Q 005190 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQ-MLV 337 (709)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLv 337 (709)
.... ......+| +++
T Consensus 160 -----------------------------~~~~-----------------------------------~~~~~~~pp~li 175 (239)
T 3u0v_A 160 -----------------------------YQAL-----------------------------------QKSNGVLPELFQ 175 (239)
T ss_dssp -----------------------------HHHH-----------------------------------HHCCSCCCCEEE
T ss_pred -----------------------------HHHH-----------------------------------HhhccCCCCEEE
Confidence 0000 01334567 999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 338 LCSGKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
++|++|.+++.+. ++.+.+.++ ++++++++++||....+..+.+.+.|.+
T Consensus 176 ~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 229 (239)
T 3u0v_A 176 CHGTADELVLHSW-AEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILT 229 (239)
T ss_dssp EEETTCSSSCHHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred EeeCCCCccCHHH-HHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHH
Confidence 9999999999976 666666543 7899999999999996666666666663
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=168.15 Aligned_cols=215 Identities=14% Similarity=0.145 Sum_probs=141.3
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG 206 (709)
+|+|+|+||++++...|..+++.|..+++|+++|+||||.+ +++++++++.+.+..+ .+..+++|+||||||
T Consensus 101 ~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~---~~~~~~~l~G~S~Gg 177 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQ---QPHGPYYLLGYSLGG 177 (329)
T ss_dssp SCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHHCSSHHHHHHHHHHHHHHH---CSSSCEEEEEETHHH
T ss_pred CCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEEccCH
Confidence 67899999999999999999999998999999999999987 7788888877776653 345689999999999
Q ss_pred HHHHHHHHh---CCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 207 CIALAVAAR---NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 207 ~iAl~~A~~---~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
.+|+.+|.+ +|+.+.++|++++....... +... ....+.............
T Consensus 178 ~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~----------------------- 231 (329)
T 3tej_A 178 TLAQGIAARLRARGEQVAFLGLLDTWPPETQN-WQEK--EANGLDPEVLAEINRERE----------------------- 231 (329)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCCCTHHHH-TC-------CCCCTHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHhcCCcccEEEEeCCCCCCccc-cccc--cccccChhhHHHHHHHHH-----------------------
Confidence 999999999 99999999999986543211 0000 000000000000000000
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHh-hhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 362 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~ 362 (709)
... .. .........+.......... ..........+.+|++++.|++|...+... ...+.+..+++
T Consensus 232 --~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~-~~~w~~~~~~~ 298 (329)
T 3tej_A 232 --AFL---AA-------QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSP-ERAWSPWIAEL 298 (329)
T ss_dssp --HHH---HT-------TCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCH-HHHHTTTEEEE
T ss_pred --HHH---Hh-------ccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCc-hhhHHHhcCCc
Confidence 000 00 00000000011011111100 000112245678999999999999887775 67788877889
Q ss_pred EEEEEcCCCccccccCh--hhHHHHHhhc
Q 005190 363 EPRNFYGHGHFLLLEDG--VDLVTIIKGA 389 (709)
Q Consensus 363 ~~~~i~~aGH~~~le~p--~~~~~~I~~~ 389 (709)
+++.++ +||+.+++.| +.+++.|.++
T Consensus 299 ~~~~v~-g~H~~~~~~~~~~~ia~~l~~~ 326 (329)
T 3tej_A 299 DIYRQD-CAHVDIISPGTFEKIGPIIRAT 326 (329)
T ss_dssp EEEEES-SCGGGGGSTTTHHHHHHHHHHH
T ss_pred EEEEec-CChHHhCCChHHHHHHHHHHHH
Confidence 999998 6999998887 7888888843
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.71 E-value=9.7e-17 Score=160.30 Aligned_cols=183 Identities=12% Similarity=0.130 Sum_probs=134.4
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcC-C---ceEEEEeCCCCCCC---------------------------CHHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGK-I---FDIWCLHIPVKDRT---------------------------SFTGLVKL 180 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~-~---~~Vi~~Dl~G~G~S---------------------------s~~~~~~d 180 (709)
.++|||+||++++...|..+++.|.+ + ++|+.+|.+++|.+ ++++.+++
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 45699999999999999999999963 3 78999888888752 24567899
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC-----CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhH
Q 005190 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARN-----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTML 255 (709)
Q Consensus 181 l~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~-----P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (709)
+.++++.+...++.++++|+||||||.++..++..+ |+.|.++|+++++....... +.
T Consensus 84 l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-----------~~------ 146 (250)
T 3lp5_A 84 LNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-----------TT------ 146 (250)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----------SS------
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----------cc------
Confidence 999999998888889999999999999999999987 67899999998754432110 00
Q ss_pred HHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccE
Q 005190 256 SSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQM 335 (709)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 335 (709)
. .. ..+.++.. ....+.. ++|+
T Consensus 147 -------~----------------~~----~~~~~l~~------------------------------~~~~lp~-~vpv 168 (250)
T 3lp5_A 147 -------A----------------KT----SMFKELYR------------------------------YRTGLPE-SLTV 168 (250)
T ss_dssp -------C----------------CC----HHHHHHHH------------------------------TGGGSCT-TCEE
T ss_pred -------c----------------cC----HHHHHHHh------------------------------ccccCCC-CceE
Confidence 0 00 00111000 0122333 7999
Q ss_pred EEEeeC----CCCCCCcHHHHHHHHhhcCC--cE--EEEEc--CCCccccccChhhHHHHHhhccccc
Q 005190 336 LVLCSG----KDQLMPSQEEGERLSSALHK--CE--PRNFY--GHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 336 Lvi~G~----~D~~v~~~~~~~~l~~~~~~--~~--~~~i~--~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
++|+|+ .|.++|.+. +..+...+++ .. ...+. +++|..+.++| ++.+.|. .|+.
T Consensus 169 l~I~G~~~~~~Dg~Vp~~s-a~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~--~FL~ 232 (250)
T 3lp5_A 169 YSIAGTENYTSDGTVPYNS-VNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIR--QYLL 232 (250)
T ss_dssp EEEECCCCCCTTTBCCHHH-HTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHH--HHTS
T ss_pred EEEEecCCCCCCceeeHHH-HHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHH--HHHh
Confidence 999999 999999996 7777766653 22 23343 57799999999 7888888 4543
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-17 Score=169.54 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=85.4
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhcC--CceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC---C--CCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS---P--KRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~---~--~~~v~Lv 200 (709)
+.|+||++||.+ ++...|..++..|++ +|.|+++|+||+|.+++....+|+.++++.+.... + .++++|+
T Consensus 72 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 151 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDPDRIAVA 151 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 357899999998 888999999999963 89999999999999988777778777777665432 2 2589999
Q ss_pred EechhHHHHHHHHHhCCC----ceeEEEEecCCCC
Q 005190 201 GESLGACIALAVAARNPD----IDLVLILVNPATS 231 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~ 231 (709)
|||+||.+|+.+|..+|+ .++++|+++|...
T Consensus 152 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 152 GDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred ecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 999999999999988776 4999999998765
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-17 Score=172.13 Aligned_cols=194 Identities=12% Similarity=0.102 Sum_probs=136.8
Q ss_pred CCCCEEEEeCCC---CCCcccHHHHHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhc---cCCCCCEEEEEe
Q 005190 130 RDSPLLLFLPGI---DGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN---RSPKRPVYLVGE 202 (709)
Q Consensus 130 ~~~p~Vv~lHG~---~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~---~~~~~~v~LvGh 202 (709)
.+.|+||++||. .++...|..++..| .+||.|+++|++|+|.+++.+..+|+.++++.+.. ..+..+++|+||
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~ 159 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGH 159 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEee
Confidence 357899999994 45666677778877 47999999999999999998889998888888765 455689999999
Q ss_pred chhHHHHHHHHHhCCC-------ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHh
Q 005190 203 SLGACIALAVAARNPD-------IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVA 275 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~-------~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (709)
||||.+|+.+|.+.+. .++++|++++........ ..... ......+.
T Consensus 160 S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~--------~~~~~--------~~~~~~~~---------- 213 (303)
T 4e15_A 160 XAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS--------NLESV--------NPKNILGL---------- 213 (303)
T ss_dssp THHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH--------TCTTT--------SGGGTTCC----------
T ss_pred cHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh--------ccccc--------chhhhhcC----------
Confidence 9999999999987543 799999998865432110 00000 00000000
Q ss_pred hccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcc----cCCccEEEEeeCCCCCCCcHHH
Q 005190 276 KRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLH----AVKAQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~PvLvi~G~~D~~v~~~~~ 351 (709)
.. +.. . . .. .....+. .+.+|+|+++|++|.+++.+.
T Consensus 214 ---~~-~~~----~---~-----------~s----------------p~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~- 254 (303)
T 4e15_A 214 ---NE-RNI----E---S-----------VS----------------PMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQ- 254 (303)
T ss_dssp ---CT-TTT----T---T-----------TC----------------GGGCCCCCGGGGTTSEEEEEEEEESCHHHHHH-
T ss_pred ---CH-HHH----H---H-----------cC----------------chhhcccccccCCCCCEEEEEeCCCCCCchHH-
Confidence 00 000 0 0 00 0001122 348999999999999999886
Q ss_pred HHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 352 GERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 352 ~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
++.+.+.++ ++++++++++||+.++|+..+....|.+
T Consensus 255 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 295 (303)
T 4e15_A 255 SRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSR 295 (303)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHH
T ss_pred HHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHH
Confidence 887777654 6799999999999999988776666653
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.70 E-value=7.2e-16 Score=158.24 Aligned_cols=96 Identities=20% Similarity=0.297 Sum_probs=82.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
++++|||+||++++...|..+.+.|. ++|+++|+++.... +++++++++.+.++.+ .+..+++|+||||||.+|
T Consensus 23 ~~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~~~~~~~~~a~~~~~~i~~~---~~~~~~~l~GhS~Gg~va 97 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQV---QPEGPYRVAGYSYGACVA 97 (283)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCCSCHHHHHHHHHHHHTTT---CCSSCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEECHhHHHH
Confidence 46789999999999999999999997 99999999876543 8899999998888762 234689999999999999
Q ss_pred HHHHHhC---CCcee---EEEEecCCCC
Q 005190 210 LAVAARN---PDIDL---VLILVNPATS 231 (709)
Q Consensus 210 l~~A~~~---P~~v~---~lVl~~p~~~ 231 (709)
+.+|.+. |+.+. ++|++++...
T Consensus 98 ~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 98 FEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp HHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred HHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 9999876 88898 9999998654
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=168.65 Aligned_cols=220 Identities=14% Similarity=0.085 Sum_probs=137.0
Q ss_pred CCCEEEEeCCCCC---Ccc--cHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC--------CCC
Q 005190 131 DSPLLLFLPGIDG---VGL--GLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS--------PKR 195 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~~--~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~--------~~~ 195 (709)
..|+||++||.+. +.. .|..++..|+ .++.|+++|+||++.+++....+|+.++++.+.... ...
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~ 161 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKDSRDEWLTNFADFS 161 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTTHHHHHHHHHHHHHHTCCCHHHHHHEEEE
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCchHHHHHHHHHHHHHhCCcchhhccCCcc
Confidence 4678999999763 233 3888888885 689999999999999988888899888888877642 226
Q ss_pred CEEEEEechhHHHHHHHHHhCCC--------ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 196 PVYLVGESLGACIALAVAARNPD--------IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~--------~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
+++|+|||+||.+|+.+|.++|+ .++++|+++|........... ........ .. .
T Consensus 162 ~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~----~~~~~~~~-----------~~-~- 224 (338)
T 2o7r_A 162 NCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSE----LRLANDSR-----------LP-T- 224 (338)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHH----HHTTTCSS-----------SC-H-
T ss_pred eEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhh----hccCCCcc-----------cC-H-
Confidence 89999999999999999999988 899999999876533211100 00000000 00 0
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 347 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~ 347 (709)
.....+....... ..... ...... +... ........+..+.+|+|+++|++|.+++
T Consensus 225 --------------~~~~~~~~~~~~~-~~~~~-~~~~~~--~~~~------~~~~~~~~l~~~~~P~Lvi~G~~D~~~~ 280 (338)
T 2o7r_A 225 --------------FVLDLIWELSLPM-GADRD-HEYCNP--TAES------EPLYSFDKIRSLGWRVMVVGCHGDPMID 280 (338)
T ss_dssp --------------HHHHHHHHHHSCT-TCCTT-STTTCC--C----------CCTHHHHHHHHTCEEEEEEETTSTTHH
T ss_pred --------------HHHHHHHHHhCCC-CCCCC-CcccCC--CCCC------cccccHhhhcCCCCCEEEEECCCCcchH
Confidence 0000000000000 00000 000000 0000 0000012334567899999999999987
Q ss_pred cHH-HHHHHHhhcCCcEEEEEcCCCccccccCh---hhHHHHHhhccccc
Q 005190 348 SQE-EGERLSSALHKCEPRNFYGHGHFLLLEDG---VDLVTIIKGASYYR 393 (709)
Q Consensus 348 ~~~-~~~~l~~~~~~~~~~~i~~aGH~~~le~p---~~~~~~I~~~~f~~ 393 (709)
... ..+.+.+..+++++++++++||..++++| +++.+.|. .|+.
T Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~--~Fl~ 328 (338)
T 2o7r_A 281 RQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILK--KFVV 328 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHH--HHHC
T ss_pred HHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHH--HHHH
Confidence 431 14455555567899999999999988777 66777777 4443
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=170.80 Aligned_cols=206 Identities=13% Similarity=0.113 Sum_probs=128.9
Q ss_pred CCCEEEEeCCCCCCcc-cHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGL-GLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~-~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
..|+||++||++++.. .|..+...| ..||.|+++|+||+|.| +++++..++.+.+..... .+..+++|+|
T Consensus 192 ~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~v~~~l~~~~~-vd~~~i~l~G 270 (415)
T 3mve_A 192 PHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPY-VDHHRVGLIG 270 (415)
T ss_dssp CEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSCTTHHHHHHHHHGGGCTT-EEEEEEEEEE
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHhCcC-CCCCcEEEEE
Confidence 4679999999999854 555566777 58999999999999988 345555555555544210 1246899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||||.+|+.+|..+|++++++|+++|....... ...+....+......+... .+.. ..
T Consensus 271 ~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~g~~-------------~~ 329 (415)
T 3mve_A 271 FRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFA----SPQKLQQMPKMYLDVLASR----LGKS-------------VV 329 (415)
T ss_dssp ETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHH----CHHHHTTSCHHHHHHHHHH----TTCS-------------SB
T ss_pred ECHHHHHHHHHHHhCCcceeEEEEECCccccccc----cHHHHHHhHHHHHHHHHHH----hCCC-------------cc
Confidence 9999999999999999999999999986431111 0011111111111100000 0000 00
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhh--cccCCccEEEEeeCCCCCCCcHHHHHHHHhhc
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSR--LHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 359 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~ 359 (709)
. ...+.. .+.......... ..++++|+|+++|++|.++|.+. +..+.+..
T Consensus 330 ~-~~~~~~--------------------------~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~-~~~l~~~~ 381 (415)
T 3mve_A 330 D-IYSLSG--------------------------QMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSD-NQMVAFFS 381 (415)
T ss_dssp C-HHHHHH--------------------------HGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHH-HHHHHHTB
T ss_pred C-HHHHHH--------------------------HHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHH-HHHHHHhC
Confidence 0 000000 000000000001 35789999999999999999997 88999999
Q ss_pred CCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 360 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 360 ~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++..++ +.++++.+.+.+|
T Consensus 382 ~~~~l~~i~g~~~h---~~~~~~~~~i~~f 408 (415)
T 3mve_A 382 TYGKAKKISSKTIT---QGYEQSLDLAIKW 408 (415)
T ss_dssp TTCEEEEECCCSHH---HHHHHHHHHHHHH
T ss_pred CCceEEEecCCCcc---cchHHHHHHHHHH
Confidence 99999999983221 2556666666644
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=165.69 Aligned_cols=213 Identities=16% Similarity=0.052 Sum_probs=135.9
Q ss_pred CCCEEEEeCCCCC---Cccc--HHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc------CCCC-C
Q 005190 131 DSPLLLFLPGIDG---VGLG--LIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR------SPKR-P 196 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~~~--~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~------~~~~-~ 196 (709)
..|+||++||.+. +... |..++..|+ .+|.|+++|+||++.+.+....+|+.++++.+... .... +
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~ 191 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVH 191 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTCGGGCCTTTSSCE
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCchhHHHHHHHHHHHHhCchhhcCCCCCCc
Confidence 4679999999543 3333 888888886 68999999999999998877788888888777653 2346 8
Q ss_pred EEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 197 VYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
++|+|||+||.+|+.+|.++|+ .++++|+++|.......... ........ ..
T Consensus 192 i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~----~~~~~~~~-----------~~---------- 246 (351)
T 2zsh_A 192 IFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTES----EKSLDGKY-----------FV---------- 246 (351)
T ss_dssp EEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHH----HHHHTTTS-----------SC----------
T ss_pred EEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChh----hhhcCCCc-----------cc----------
Confidence 9999999999999999999988 89999999987653221100 00000000 00
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCc-cEEEEeeCCCCCCCcHH-H
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKA-QMLVLCSGKDQLMPSQE-E 351 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLvi~G~~D~~v~~~~-~ 351 (709)
.......+....... .. .. ....... . ......+.++++ |+|+++|++|.+++... .
T Consensus 247 ------~~~~~~~~~~~~~~~-~~--~~-~~~~~~~----------~-~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~ 305 (351)
T 2zsh_A 247 ------TVRDRDWYWKAFLPE-GE--DR-EHPACNP----------F-SPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 305 (351)
T ss_dssp ------CHHHHHHHHHHHSCT-TC--CT-TSTTTCT----------T-STTSCCCTTCCCCEEEEEEETTSTTHHHHHHH
T ss_pred ------CHHHHHHHHHHhCCC-CC--CC-CCcccCC----------C-CCCccchhhCCCCCEEEEEcCCCcchHHHHHH
Confidence 000000000000000 00 00 0000000 0 001134566677 99999999999886321 1
Q ss_pred HHHHHhhcCCcEEEEEcCCCccccc----cChhhHHHHHhhc
Q 005190 352 GERLSSALHKCEPRNFYGHGHFLLL----EDGVDLVTIIKGA 389 (709)
Q Consensus 352 ~~~l~~~~~~~~~~~i~~aGH~~~l----e~p~~~~~~I~~~ 389 (709)
.+.+.+...++++++++++||..++ ++++++.+.|.+|
T Consensus 306 ~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~F 347 (351)
T 2zsh_A 306 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAF 347 (351)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHH
Confidence 3344444458999999999999987 7888898888843
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3e-16 Score=164.38 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=85.7
Q ss_pred CCCEEEEeCC---CCCCcccHHHHHHHhcC--CceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC----CCCCEEEEE
Q 005190 131 DSPLLLFLPG---IDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS----PKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG---~~~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~----~~~~v~LvG 201 (709)
..|+|||+|| ..++...|..++..|++ +|.|+++|+||+|.+.+....+|+.++++.+.... ..++++|+|
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G 168 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGG 168 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEE
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCcchHHHHHHHHHHHHHhHHHhCCCceEEEEe
Confidence 4789999999 55888899999999974 89999999999999987777777777776665433 457899999
Q ss_pred echhHHHHHHHHHhCCCce---eEEEEecCCCCc
Q 005190 202 ESLGACIALAVAARNPDID---LVLILVNPATSF 232 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v---~~lVl~~p~~~~ 232 (709)
||+||.+|+.+|..+|+.+ +++|+++|....
T Consensus 169 ~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 169 DSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred cCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 9999999999999888776 899999987553
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=164.76 Aligned_cols=210 Identities=12% Similarity=0.103 Sum_probs=133.9
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
+.|+|||+||.+ ++...|..++..|+ .+|.|+++|+||.+..++....+|+.+.++.+....+..+++|+|||||
T Consensus 95 ~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 174 (326)
T 3d7r_A 95 IDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSG 174 (326)
T ss_dssp CSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEETHH
T ss_pred CCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCchHHHHHHHHHHHHHHhccCCCcEEEEEECHH
Confidence 478999999954 56677888888885 4899999999999888777777787777777766566779999999999
Q ss_pred HHHHHHHHHhCCCc----eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 206 ACIALAVAARNPDI----DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 206 G~iAl~~A~~~P~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|.+|+.+|.++|+. ++++|+++|...................+ .. ..
T Consensus 175 G~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~-------------~~----------------~~ 225 (326)
T 3d7r_A 175 GALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDA-------------VL----------------SQ 225 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCS-------------SC----------------CH
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCc-------------cc----------------CH
Confidence 99999999988776 99999999865432211000000000000 00 00
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHH-HHHHHHhhcC
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE-EGERLSSALH 360 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~-~~~~l~~~~~ 360 (709)
.....+......... .... .. ......+.. -+|+|+++|++|..++... ..+.+.+..+
T Consensus 226 ~~~~~~~~~~~~~~~----~~~~-~~--------------~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~l~~~~~ 285 (326)
T 3d7r_A 226 FGVNEIMKKWANGLP----LTDK-RI--------------SPINGTIEG-LPPVYMFGGGREMTHPDMKLFEQMMLQHHQ 285 (326)
T ss_dssp HHHHHHHHHHHTTSC----TTST-TT--------------SGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCC----CCCC-eE--------------CcccCCccc-CCCEEEEEeCcccchHHHHHHHHHHHHCCC
Confidence 000000000000000 0000 00 000011222 2599999999998654221 1344555566
Q ss_pred CcEEEEEcCCCccccc---cChhhHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLL---EDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~l---e~p~~~~~~I~~~ 389 (709)
++++++++++||..+. ++++++.+.|.+|
T Consensus 286 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~f 317 (326)
T 3d7r_A 286 YIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKS 317 (326)
T ss_dssp CEEEEEETTCCTTGGGSSSHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCcccccccCCHHHHHHHHHHHHH
Confidence 8899999999999988 8888888888844
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-16 Score=164.92 Aligned_cols=202 Identities=14% Similarity=0.026 Sum_probs=129.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CH---------------------------HHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SF---------------------------TGLV 178 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~---------------------------~~~~ 178 (709)
..|+||++||++++...+........++|.|+++|+||+|.| .. ....
T Consensus 94 ~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 173 (337)
T 1vlq_A 94 KLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVF 173 (337)
T ss_dssp SEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHH
T ss_pred CccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHH
Confidence 467899999999887655443333468999999999999954 11 2678
Q ss_pred HHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHH
Q 005190 179 KLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLS 256 (709)
Q Consensus 179 ~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (709)
+|+.++++.+..... ..+++++|||+||.+++.+|..+| .++++|+.+|........ .............
T Consensus 174 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~~~~-------~~~~~~~~~~~~~ 245 (337)
T 1vlq_A 174 TDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRRA-------VQLVDTHPYAEIT 245 (337)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHHH-------HHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccCHHHH-------HhcCCCcchHHHH
Confidence 899999998876542 358999999999999999999999 588999988854321110 0000000000000
Q ss_pred HhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEE
Q 005190 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQML 336 (709)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 336 (709)
..+. . ...........+. .......+.++++|+|
T Consensus 246 ~~~~----------------~----------------------------~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l 279 (337)
T 1vlq_A 246 NFLK----------------T----------------------------HRDKEEIVFRTLS--YFDGVNFAARAKIPAL 279 (337)
T ss_dssp HHHH----------------H----------------------------CTTCHHHHHHHHH--TTCHHHHHTTCCSCEE
T ss_pred HHHH----------------h----------------------------CchhHHHHHHhhh--hccHHHHHHHcCCCEE
Confidence 0000 0 0000000000000 0011133467889999
Q ss_pred EEeeCCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccc-cChhhHHHHHh
Q 005190 337 VLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLL-EDGVDLVTIIK 387 (709)
Q Consensus 337 vi~G~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~l-e~p~~~~~~I~ 387 (709)
+++|++|.+++++. ...+.+.++ ++++++++++||.... +..+.+.+.|.
T Consensus 280 ii~G~~D~~~p~~~-~~~~~~~l~~~~~~~~~~~~gH~~~~~~~~~~~~~fl~ 331 (337)
T 1vlq_A 280 FSVGLMDNICPPST-VFAAYNYYAGPKEIRIYPYNNHEGGGSFQAVEQVKFLK 331 (337)
T ss_dssp EEEETTCSSSCHHH-HHHHHHHCCSSEEEEEETTCCTTTTHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCchh-HHHHHHhcCCCcEEEEcCCCCCCCcchhhHHHHHHHHH
Confidence 99999999999997 888888777 4889999999999642 23333444443
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.7e-16 Score=157.66 Aligned_cols=195 Identities=11% Similarity=0.015 Sum_probs=132.3
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceE--------------EEEeCCCCCC--------------CCHHHHHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDI--------------WCLHIPVKDR--------------TSFTGLVKLVES 183 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~V--------------i~~Dl~G~G~--------------Ss~~~~~~dl~~ 183 (709)
+++|||+||++++...|..+++.|++.+.+ +.+|-.+.+. .+++++++++..
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~ 82 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKI 82 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHHH
Confidence 556999999999999999999999755443 4444222111 167899999988
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHh
Q 005190 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (709)
Q Consensus 184 ~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (709)
+++.+...++..+++++||||||.+++.+|.++|+ .++++|+++++........ ...
T Consensus 83 ~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~--------~~~---------- 144 (254)
T 3ds8_A 83 AMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPND--------NGM---------- 144 (254)
T ss_dssp HHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHH--------HCS----------
T ss_pred HHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccc--------ccc----------
Confidence 88888877777899999999999999999999998 8999999988554322110 000
Q ss_pred hhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEE
Q 005190 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVL 338 (709)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi 338 (709)
.+... .... ...++.++ .. ....+.. ++|++.|
T Consensus 145 --~~~~~-----------~~p~---~~~~~~~~-------------------------~~-----~~~~~~~-~~~vl~I 177 (254)
T 3ds8_A 145 --DLSFK-----------KLPN---STPQMDYF-------------------------IK-----NQTEVSP-DLEVLAI 177 (254)
T ss_dssp --CTTCS-----------SCSS---CCHHHHHH-------------------------HH-----TGGGSCT-TCEEEEE
T ss_pred --ccccc-----------cCCc---chHHHHHH-------------------------HH-----HHhhCCC-CcEEEEE
Confidence 00000 0000 00011100 00 0122233 7899999
Q ss_pred eeC------CCCCCCcHHHHHHHHhhcCC----cEEEEEcC--CCccccccChhhHHHHHhhccccccc
Q 005190 339 CSG------KDQLMPSQEEGERLSSALHK----CEPRNFYG--HGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 339 ~G~------~D~~v~~~~~~~~l~~~~~~----~~~~~i~~--aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
+|+ .|.+||... ++.+...+++ .+.+.+.+ ++|..+.++|+ +.+.|. .|+++.
T Consensus 178 ~G~~~~~~~~Dg~Vp~~s-s~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~--~fL~~~ 242 (254)
T 3ds8_A 178 AGELSEDNPTDGIVPTIS-SLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTY--WFLEKF 242 (254)
T ss_dssp EEESBTTBCBCSSSBHHH-HTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHH--HHHHTC
T ss_pred EecCCCCCCCCcEeeHHH-HHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHH--HHHHHh
Confidence 999 999999996 8888776664 44455665 77999999996 777777 455444
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=180.59 Aligned_cols=197 Identities=15% Similarity=0.161 Sum_probs=137.5
Q ss_pred CCCEEEEeCCCCCC--cccHHHHHHHh-cCCceEEEEeCCC---CCCC--------CHHHHHHHHHHHHHHhhccCCCCC
Q 005190 131 DSPLLLFLPGIDGV--GLGLIRQHQRL-GKIFDIWCLHIPV---KDRT--------SFTGLVKLVESTVRSESNRSPKRP 196 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s--~~~~~~~~~~L-~~~~~Vi~~Dl~G---~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~ 196 (709)
..|+||++||.+.+ ...|..+++.| .+||.|+++|+|| ||.+ ......+|+.++++++......++
T Consensus 359 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~ 438 (582)
T 3o4h_A 359 PGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASE 438 (582)
T ss_dssp SEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcce
Confidence 57899999998766 67888888888 4789999999999 6655 123556777777777766543348
Q ss_pred EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhh
Q 005190 197 VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAK 276 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (709)
++|+||||||.+|+.+|.++|++++++|+++|...... +........ ..+.....+.
T Consensus 439 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~----------- 495 (582)
T 3o4h_A 439 LYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE--------MYELSDAAF----RNFIEQLTGG----------- 495 (582)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHH--------HHHTCCHHH----HHHHHHHTTT-----------
T ss_pred EEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHH--------Hhhcccchh----HHHHHHHcCc-----------
Confidence 99999999999999999999999999999988543211 000000000 0000000000
Q ss_pred ccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHH
Q 005190 277 RLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLS 356 (709)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~ 356 (709)
. . ..+ . .......+.++++|+|+++|++|..++++. ++.+.
T Consensus 496 ---~---~-~~~-----------------------------~--~~sp~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~ 536 (582)
T 3o4h_A 496 ---S---R-EIM-----------------------------R--SRSPINHVDRIKEPLALIHPQNASRTPLKP-LLRLM 536 (582)
T ss_dssp ---C---H-HHH-----------------------------H--HTCGGGGGGGCCSCEEEEEETTCSSSCHHH-HHHHH
T ss_pred ---C---H-HHH-----------------------------H--hcCHHHHHhcCCCCEEEEecCCCCCcCHHH-HHHHH
Confidence 0 0 000 0 001113456789999999999999999997 88887
Q ss_pred hhcCC----cEEEEEcCCCcccc-ccChhhHHHHHhhc
Q 005190 357 SALHK----CEPRNFYGHGHFLL-LEDGVDLVTIIKGA 389 (709)
Q Consensus 357 ~~~~~----~~~~~i~~aGH~~~-le~p~~~~~~I~~~ 389 (709)
+.+++ +++++++++||.++ .++++++.+.+.+|
T Consensus 537 ~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 574 (582)
T 3o4h_A 537 GELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFF 574 (582)
T ss_dssp HHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHH
Confidence 76653 89999999999998 56777788877754
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-16 Score=153.79 Aligned_cols=167 Identities=16% Similarity=0.222 Sum_probs=120.3
Q ss_pred ccCCCCC-CCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------------CHHHHHHHHHHHHHH
Q 005190 123 LECGSHT-RDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------------SFTGLVKLVESTVRS 187 (709)
Q Consensus 123 ~~~g~p~-~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------------s~~~~~~dl~~~l~~ 187 (709)
.+.|.|. +.+++|||+||++++...|..+++.|. .++.|+++|.+|++.- .+++..+.+..+++.
T Consensus 12 ~~~g~P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 91 (210)
T 4h0c_A 12 ITSGVPVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAE 91 (210)
T ss_dssp EEEESCTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHH
T ss_pred eeCCCCcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHH
Confidence 3445543 246689999999999999988888885 7899999999987631 234445556666665
Q ss_pred hhcc-CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 188 ESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 188 ~~~~-~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
+... .+.++++|+|+|+||.+|+.+|.++|+.+.++|.+++.........
T Consensus 92 ~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~----------------------------- 142 (210)
T 4h0c_A 92 IEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI----------------------------- 142 (210)
T ss_dssp HHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG-----------------------------
T ss_pred HHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh-----------------------------
Confidence 5433 2456899999999999999999999999999999876332100000
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
.. ..-...++|+++++|++|+++
T Consensus 143 ----------------------~~-----------------------------------~~~~~~~~Pvl~~hG~~D~~v 165 (210)
T 4h0c_A 143 ----------------------GN-----------------------------------YKGDFKQTPVFISTGNPDPHV 165 (210)
T ss_dssp ----------------------GG-----------------------------------CCBCCTTCEEEEEEEESCTTS
T ss_pred ----------------------hh-----------------------------------hhhhccCCceEEEecCCCCcc
Confidence 00 000122579999999999999
Q ss_pred CcHHHHHHHHhhc----CCcEEEEEcCCCccccc
Q 005190 347 PSQEEGERLSSAL----HKCEPRNFYGHGHFLLL 376 (709)
Q Consensus 347 ~~~~~~~~l~~~~----~~~~~~~i~~aGH~~~l 376 (709)
|.+. .+++.+.+ .+++++++|+.||.+..
T Consensus 166 p~~~-~~~~~~~L~~~g~~v~~~~ypg~gH~i~~ 198 (210)
T 4h0c_A 166 PVSR-VQESVTILEDMNAAVSQVVYPGRPHTISG 198 (210)
T ss_dssp CHHH-HHHHHHHHHHTTCEEEEEEEETCCSSCCH
T ss_pred CHHH-HHHHHHHHHHCCCCeEEEEECCCCCCcCH
Confidence 9986 76655533 35788999999998753
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=177.35 Aligned_cols=193 Identities=13% Similarity=0.077 Sum_probs=135.1
Q ss_pred CCCEEEEeCCCCCCc---ccHHH----HHHHhc-CCceEEEEeCCCCCCCCH-----------HHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDGVG---LGLIR----QHQRLG-KIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~---~~~~~----~~~~L~-~~~~Vi~~Dl~G~G~Ss~-----------~~~~~dl~~~l~~~~~~ 191 (709)
..|+||++||.+++. ..|.. +++.|+ ++|.|+++|+||+|.|.. ....+|+.++++++...
T Consensus 484 ~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 563 (706)
T 2z3z_A 484 KYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQ 563 (706)
T ss_dssp CEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTS
T ss_pred CccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhC
Confidence 457899999987665 35665 577774 789999999999999822 23457778888776543
Q ss_pred C--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 192 S--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 192 ~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
. ...+++|+||||||.+|+.+|.++|++++++|+++|....... ... +.....+.+
T Consensus 564 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----~~~--------------~~~~~~~~~--- 621 (706)
T 2z3z_A 564 SWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY-----AIM--------------YGERYFDAP--- 621 (706)
T ss_dssp TTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS-----BHH--------------HHHHHHCCT---
T ss_pred CCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH-----Hhh--------------hhhhhcCCc---
Confidence 2 2468999999999999999999999999999999886542100 000 000000000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
.. ....+. .......+.++++|+|+++|++|..++.+
T Consensus 622 -----------~~-~~~~~~-------------------------------~~~~~~~~~~i~~P~lii~G~~D~~v~~~ 658 (706)
T 2z3z_A 622 -----------QE-NPEGYD-------------------------------AANLLKRAGDLKGRLMLIHGAIDPVVVWQ 658 (706)
T ss_dssp -----------TT-CHHHHH-------------------------------HHCGGGGGGGCCSEEEEEEETTCSSSCTH
T ss_pred -----------cc-Chhhhh-------------------------------hCCHhHhHHhCCCCEEEEeeCCCCCCCHH
Confidence 00 000000 00112445778999999999999999999
Q ss_pred HHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 350 EEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 350 ~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
. ++.+.+.++ ++++++++++||.++.++++++.+.|.+|
T Consensus 659 ~-~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 701 (706)
T 2z3z_A 659 H-SLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRY 701 (706)
T ss_dssp H-HHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHH
Confidence 6 777776554 46999999999999988888898888854
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-15 Score=152.26 Aligned_cols=196 Identities=13% Similarity=0.111 Sum_probs=134.2
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CC--ceEEEEeCCCCCCC-------------------------CHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KI--FDIWCLHIPVKDRT-------------------------SFTGLVKLVE 182 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~--~~Vi~~Dl~G~G~S-------------------------s~~~~~~dl~ 182 (709)
+.++|||+||++++...|..+++.|+ .+ ++|+.+|.+++|.+ ++.++++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 35679999999999999999999996 44 37999999888863 2346788899
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHH
Q 005190 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS 257 (709)
Q Consensus 183 ~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (709)
++++.+...++.++++|+||||||.+++.+|..+|+ .|+++|+++++........ ..+.. .
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~--------~~~~~-~----- 150 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMN--------ENVNE-I----- 150 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTS--------SCTTT-S-----
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccccc--------CCcch-h-----
Confidence 999888877888899999999999999999999874 7999999987544321100 00000 0
Q ss_pred hhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEE
Q 005190 258 TLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLV 337 (709)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 337 (709)
.+. ..+.+ ......+.++.. ....++..++|+|.
T Consensus 151 ~~~-~~g~p---------------~~~~~~~~~l~~------------------------------~~~~~p~~~~~vl~ 184 (249)
T 3fle_A 151 IVD-KQGKP---------------SRMNAAYRQLLS------------------------------LYKIYCGKEIEVLN 184 (249)
T ss_dssp CBC-TTCCB---------------SSCCHHHHHTGG------------------------------GHHHHTTTTCEEEE
T ss_pred hhc-ccCCC---------------cccCHHHHHHHH------------------------------HHhhCCccCCeEEE
Confidence 000 00000 000011111000 01334557899999
Q ss_pred EeeC------CCCCCCcHHHHHHHHhhcCC----cEEEEEcC--CCccccccChhhHHHHHhh
Q 005190 338 LCSG------KDQLMPSQEEGERLSSALHK----CEPRNFYG--HGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 338 i~G~------~D~~v~~~~~~~~l~~~~~~----~~~~~i~~--aGH~~~le~p~~~~~~I~~ 388 (709)
|+|+ .|..||... +..+...+++ .+.+++.| +.|..+.+++ ++.+.|.+
T Consensus 185 I~G~~~~~~~sDG~V~~~S-a~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~ 245 (249)
T 3fle_A 185 IYGDLEDGSHSDGRVSNSS-SQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQ 245 (249)
T ss_dssp EEEECCSSSCBSSSSBHHH-HHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHH
T ss_pred EeccCCCCCCCCCcccHHH-HHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHH
Confidence 9998 699999996 8766665553 35566655 8999999988 66666664
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-15 Score=158.16 Aligned_cols=100 Identities=13% Similarity=-0.008 Sum_probs=87.3
Q ss_pred CCCEEEEeCCCCCCccc-HH-HHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 131 DSPLLLFLPGIDGVGLG-LI-RQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~-~~-~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
++++|||+||++++... |. .+.+.|. ++|+|+++|+||||.++..+.++++.+.++.+....+.++++||||||||.
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~ 109 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGL 109 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhH
Confidence 35679999999999887 88 8899995 689999999999999988777788888888777667668999999999999
Q ss_pred HHHHHHHhCC---CceeEEEEecCCC
Q 005190 208 IALAVAARNP---DIDLVLILVNPAT 230 (709)
Q Consensus 208 iAl~~A~~~P---~~v~~lVl~~p~~ 230 (709)
++..++..+| +.|+++|++++..
T Consensus 110 va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 110 VAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHcCccchhhhEEEEECCCC
Confidence 9999988876 7899999998854
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-16 Score=171.57 Aligned_cols=98 Identities=21% Similarity=0.152 Sum_probs=74.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCCC--H-HHHHHHHHHHHHHhhccC--CCCCEEEEEech
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS--F-TGLVKLVESTVRSESNRS--PKRPVYLVGESL 204 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss--~-~~~~~dl~~~l~~~~~~~--~~~~v~LvGhS~ 204 (709)
..|+||++||.+++...+ .+..| .+||.|+++|++|+|.+. . ....+|+.++++.+.... ...+++|+||||
T Consensus 157 ~~P~Vv~~hG~~~~~~~~--~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~ 234 (422)
T 3k2i_A 157 PFPGIIDIFGIGGGLLEY--RASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISL 234 (422)
T ss_dssp CBCEEEEECCTTCSCCCH--HHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CcCEEEEEcCCCcchhHH--HHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECH
Confidence 368999999998764444 47777 478999999999999871 1 112445555555554443 247999999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 205 GACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 205 GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
||.+|+.+|..+|+ ++++|++++...
T Consensus 235 GG~lAl~~a~~~p~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 235 GADICLSMASFLKN-VSATVSINGSGI 260 (422)
T ss_dssp HHHHHHHHHHHCSS-EEEEEEESCCSB
T ss_pred HHHHHHHHHhhCcC-ccEEEEEcCccc
Confidence 99999999999998 999999988653
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-16 Score=162.72 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=87.7
Q ss_pred CCCEEEEeCC---CCCCcccHHHHHHHhcC--CceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 005190 131 DSPLLLFLPG---IDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG---~~~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~-----~~~~v~Lv 200 (709)
..|+||++|| ++++...|..++..|++ +|.|+++|+||+|.+++....+|+.++++.+.... ..++++|+
T Consensus 73 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~ 152 (310)
T 2hm7_A 73 PYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 152 (310)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEE
T ss_pred CCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCcceEEEE
Confidence 4679999999 78888999999999953 89999999999999988888888888888776543 23689999
Q ss_pred EechhHHHHHHHHHhCCC----ceeEEEEecCCCCc
Q 005190 201 GESLGACIALAVAARNPD----IDLVLILVNPATSF 232 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~~ 232 (709)
||||||.+|+.+|..+|+ .++++|+++|....
T Consensus 153 G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 153 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred EECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 999999999999998876 69999999987654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=178.25 Aligned_cols=193 Identities=16% Similarity=0.073 Sum_probs=136.8
Q ss_pred CCCEEEEeCCCCCCc---ccHH-----HHHHHh-cCCceEEEEeCCCCCCCCH-----------HHHHHHHHHHHHHhhc
Q 005190 131 DSPLLLFLPGIDGVG---LGLI-----RQHQRL-GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESN 190 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~---~~~~-----~~~~~L-~~~~~Vi~~Dl~G~G~Ss~-----------~~~~~dl~~~l~~~~~ 190 (709)
..|+||++||.+++. ..|. .+++.| .+||.|+++|+||+|.|.. ....+|+.++++++..
T Consensus 516 ~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 595 (741)
T 2ecf_A 516 RYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQ 595 (741)
T ss_dssp CEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHT
T ss_pred CcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHh
Confidence 467899999998774 3454 577788 5799999999999999832 1236788888888766
Q ss_pred cC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh
Q 005190 191 RS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 191 ~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
.. ...+++|+||||||.+++.+|.++|++++++|+++|....... ... +.....+.+
T Consensus 596 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----~~~--------------~~~~~~~~~-- 654 (741)
T 2ecf_A 596 QPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLY-----DSH--------------YTERYMDLP-- 654 (741)
T ss_dssp STTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGS-----BHH--------------HHHHHHCCT--
T ss_pred cCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhh-----ccc--------------cchhhcCCc--
Confidence 42 2468999999999999999999999999999999886542100 000 000000000
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCc
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 348 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~ 348 (709)
.. ....+. .......+.++++|+|+++|++|..++.
T Consensus 655 ------------~~-~~~~~~-------------------------------~~~~~~~~~~i~~P~lii~G~~D~~v~~ 690 (741)
T 2ecf_A 655 ------------AR-NDAGYR-------------------------------EARVLTHIEGLRSPLLLIHGMADDNVLF 690 (741)
T ss_dssp ------------GG-GHHHHH-------------------------------HHCSGGGGGGCCSCEEEEEETTCSSSCT
T ss_pred ------------cc-Chhhhh-------------------------------hcCHHHHHhhCCCCEEEEccCCCCCCCH
Confidence 00 000000 0011134577889999999999999999
Q ss_pred HHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 349 QEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 349 ~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+. .+.+.+.++ .+++++++++||.++.+.++++.+.|.+|
T Consensus 691 ~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 734 (741)
T 2ecf_A 691 TN-STSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAF 734 (741)
T ss_dssp HH-HHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHH
Confidence 97 887777654 35999999999999988888888888754
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.4e-15 Score=149.49 Aligned_cols=224 Identities=12% Similarity=0.120 Sum_probs=133.6
Q ss_pred CCCEEEEeCCCC---CCcccH-HHHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCC-CCCEEEEEech
Q 005190 131 DSPLLLFLPGID---GVGLGL-IRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP-KRPVYLVGESL 204 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~-~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~-~~~v~LvGhS~ 204 (709)
..|+||++||.+ ++...| ..+...++ .++.|+++|+|+.+..++....+|+.++++++..... .++++|+|+|+
T Consensus 26 ~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~Sa 105 (274)
T 2qru_A 26 PTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSA 105 (274)
T ss_dssp SCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETH
T ss_pred CCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHhccccCCcEEEEEECH
Confidence 478999999987 666555 55666674 5799999999999999999999999999998876554 57899999999
Q ss_pred hHHHHHHHHH---hCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcC-chhhhHHHHHhhccCC
Q 005190 205 GACIALAVAA---RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTG-DPLKMAMDNVAKRLSL 280 (709)
Q Consensus 205 GG~iAl~~A~---~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 280 (709)
||.+|+.+|. ..+..++++|++.+............ ...+.... ........ .... ......
T Consensus 106 GG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~------~~~~~~ 171 (274)
T 2qru_A 106 GGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRK----LLKQAISA----KEIAAIDQTKPVW------DDPFLS 171 (274)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCC----SCSSCCCS----GGGTTSCCSSCCS------CCTTCT
T ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchh----hccccccH----HHHhhhcccCCCC------CCcccc
Confidence 9999999997 35778999999877544111100000 00000000 00000000 0000 000000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
. .. .+......... ..+......... . ........+..+ .|+|+++|+.|..++... ++.+++..+
T Consensus 172 -~-~~-~~~~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~-~~~l~~~~~ 237 (274)
T 2qru_A 172 -R-YL-LYHYSIQQALL-PHFYGLPENGDW-------S-AYALSDETLKTF-PPCFSTASSSDEEVPFRY-SKKIGRTIP 237 (274)
T ss_dssp -T-HH-HHHHHHHTTCH-HHHHTCCTTSCC-------G-GGCCCHHHHHTS-CCEEEEEETTCSSSCTHH-HHHHHHHST
T ss_pred -c-hh-hhhhhhhhcch-hhccCccccccc-------c-cCCCChhhhcCC-CCEEEEEecCCCCcCHHH-HHHHHHhCC
Confidence 0 00 00000000000 000000000000 0 000000234556 799999999999999886 889999999
Q ss_pred CcEEEEEcCCCccccccChhhH
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDL 382 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~ 382 (709)
+++++++++++|..+.+.+...
T Consensus 238 ~~~l~~~~g~~H~~~~~~~~~~ 259 (274)
T 2qru_A 238 ESTFKAVYYLEHDFLKQTKDPS 259 (274)
T ss_dssp TCEEEEECSCCSCGGGGTTSHH
T ss_pred CcEEEEcCCCCcCCccCcCCHH
Confidence 9999999999999987755433
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.6e-16 Score=170.38 Aligned_cols=98 Identities=18% Similarity=0.119 Sum_probs=75.4
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCHH---HHHHHHHHHHHHhhccCC--CCCEEEEEech
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFT---GLVKLVESTVRSESNRSP--KRPVYLVGESL 204 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~---~~~~dl~~~l~~~~~~~~--~~~v~LvGhS~ 204 (709)
..|+||++||.+++...+ .+..|+ +||.|+++|++|+|.+... .-.+|+.+.++.+..... ..+++|+||||
T Consensus 173 ~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~ 250 (446)
T 3hlk_A 173 PFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISK 250 (446)
T ss_dssp CBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEEEEECH
Confidence 368899999998865444 477774 7899999999999987211 124555555665555432 36899999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 205 GACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 205 GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
||.+|+.+|..+|+ ++++|++++...
T Consensus 251 GG~lAl~~A~~~p~-v~a~V~~~~~~~ 276 (446)
T 3hlk_A 251 GGELCLSMASFLKG-ITAAVVINGSVA 276 (446)
T ss_dssp HHHHHHHHHHHCSC-EEEEEEESCCSB
T ss_pred HHHHHHHHHHhCCC-ceEEEEEcCccc
Confidence 99999999999998 889999988654
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=158.81 Aligned_cols=102 Identities=19% Similarity=0.201 Sum_probs=83.9
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc---CC--CCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR---SP--KRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~---~~--~~~v~Lv 200 (709)
+.|+||++||.+ ++...|..+...|+ .+|.|+++|+||+|.+.+....+|+.++++.+... .+ ..+++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 468999999998 88889999999996 58999999999999997766666666666555442 12 2489999
Q ss_pred EechhHHHHHHHHHhCCCc----eeEEEEecCCCCc
Q 005190 201 GESLGACIALAVAARNPDI----DLVLILVNPATSF 232 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~----v~~lVl~~p~~~~ 232 (709)
|||+||.+|+.+|..+|+. ++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred EeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 9999999999999988765 9999999997654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.63 E-value=4.1e-15 Score=155.61 Aligned_cols=101 Identities=15% Similarity=0.266 Sum_probs=86.8
Q ss_pred CCE-EEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc-CCCCCEEEEEech
Q 005190 132 SPL-LLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-SPKRPVYLVGESL 204 (709)
Q Consensus 132 ~p~-Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~-~~~~~v~LvGhS~ 204 (709)
.++ ||++||.+ ++...|..++..|+ .+|.|+++|+|+++.+.+....+|+.+.++.+... .+..+++|+|||+
T Consensus 79 ~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~ 158 (322)
T 3k6k_A 79 GAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALLKTAGSADRIIIAGDSA 158 (322)
T ss_dssp CSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHSSGGGEEEEEETH
T ss_pred CCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCchHHHHHHHHHHHHHHcCCCCccEEEEecCc
Confidence 455 99999966 77788888889885 39999999999999998888888888888887766 5567899999999
Q ss_pred hHHHHHHHHHhCCCc----eeEEEEecCCCCc
Q 005190 205 GACIALAVAARNPDI----DLVLILVNPATSF 232 (709)
Q Consensus 205 GG~iAl~~A~~~P~~----v~~lVl~~p~~~~ 232 (709)
||.+|+.+|..+|+. ++++|+++|....
T Consensus 159 GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3k6k_A 159 GGGLTTASMLKAKEDGLPMPAGLVMLSPFVDL 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred cHHHHHHHHHHHHhcCCCCceEEEEecCCcCc
Confidence 999999999988765 8999999997654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.7e-15 Score=147.71 Aligned_cols=204 Identities=17% Similarity=0.191 Sum_probs=127.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
++++|+|+||++++...|..+.+.|.. ++|+++|+||+|. .++++.+.++.+. ...+++|+||||||.+|+
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~-----~~~~~~~~i~~~~---~~~~~~l~G~S~Gg~ia~ 86 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEED-----RLDRYADLIQKLQ---PEGPLTLFGYSAGCSLAF 86 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTT-----HHHHHHHHHHHHC---CSSCEEEEEETHHHHHHH
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHH-----HHHHHHHHHHHhC---CCCCeEEEEECHhHHHHH
Confidence 356899999999999999999999987 9999999999874 4556666666532 245799999999999999
Q ss_pred HHHHhC---CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHH
Q 005190 211 AVAARN---PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL 287 (709)
Q Consensus 211 ~~A~~~---P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (709)
.+|.+. ++.+.++|++++........+... . .... +..++.. +. . ........
T Consensus 87 ~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~-~----~~~~----~~~~~~~---~~----------~--~~~~~~~~ 142 (230)
T 1jmk_C 87 EAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR-T----VESD----VEALMNV---NR----------D--NEALNSEA 142 (230)
T ss_dssp HHHHHHHHTTCCEEEEEEESCCEECCCC-------------CC----HHHHHHH---TT----------T--CSGGGSHH
T ss_pred HHHHHHHHcCCCccEEEEECCCCCCcccccccc-c----HHHH----HHHHHhc---Ch----------h--hhhhhhHH
Confidence 999876 467999999987543211100000 0 0000 0000000 00 0 00000000
Q ss_pred HHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-CcEEEE
Q 005190 288 SQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRN 366 (709)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-~~~~~~ 366 (709)
.. ..+............ .......+++|+++++|++|..++.. ...+.+..+ +++++.
T Consensus 143 ~~------------------~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~ 201 (230)
T 1jmk_C 143 VK------------------HGLKQKTHAFYSYYV-NLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKR 201 (230)
T ss_dssp HH------------------HHHHHHHHHHHHHHH-HCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEE
T ss_pred HH------------------HHHHHHHHHHHHHhh-hccccccccccEEEEEeCCCCCCccc--cchHHHhcCCCeEEEE
Confidence 00 000000001110000 01245678999999999999998733 445555543 689999
Q ss_pred EcCCCc--cccccChhhHHHHHhhc
Q 005190 367 FYGHGH--FLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 367 i~~aGH--~~~le~p~~~~~~I~~~ 389 (709)
+++ || ++..++++.+++.|.++
T Consensus 202 i~g-~H~~~~~~~~~~~~~~~i~~~ 225 (230)
T 1jmk_C 202 GFG-THAEMLQGETLDRNAGILLEF 225 (230)
T ss_dssp CSS-CGGGTTSHHHHHHHHHHHHHH
T ss_pred ecC-ChHHHcCcHhHHHHHHHHHHH
Confidence 997 99 88888999999999843
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-15 Score=154.62 Aligned_cols=102 Identities=17% Similarity=0.141 Sum_probs=86.9
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhcC--CceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~~--~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~-----~~~~v~Lv 200 (709)
+.|+||++||.+ ++...|..++..|++ +|.|+++|+|+.+...+....+|+.++++.+.... ..++++|+
T Consensus 86 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~ 165 (326)
T 3ga7_A 86 SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFA 165 (326)
T ss_dssp CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEE
T ss_pred CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCcHHHHHHHHHHHHHHhHHHhCCChhheEEE
Confidence 358999999988 888899999999965 99999999999998888888888888888876542 34689999
Q ss_pred EechhHHHHHHHHHhCCCc------eeEEEEecCCCCc
Q 005190 201 GESLGACIALAVAARNPDI------DLVLILVNPATSF 232 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~------v~~lVl~~p~~~~ 232 (709)
|||+||.+|+.+|..+|+. ++++|++.|....
T Consensus 166 G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~ 203 (326)
T 3ga7_A 166 GDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGL 203 (326)
T ss_dssp EETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSC
T ss_pred EeCHHHHHHHHHHHHHHhcCCCccCceEEEEecccccc
Confidence 9999999999999987764 8899998886543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.5e-15 Score=157.28 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=84.6
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc---C--CCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR---S--PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~---~--~~~~v~Lv 200 (709)
..|+||++||.+ ++...|..++..|+ .||.|+++|+||+|.+++....+|+.++++.+... . ...+++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVG 157 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCchHHHHHHHHHHHHhhHHHcCCChhheEEE
Confidence 467999999998 88888999998885 48999999999999998777777777777766542 1 23589999
Q ss_pred EechhHHHHHHHHHhCCC----ceeEEEEecCCCCc
Q 005190 201 GESLGACIALAVAARNPD----IDLVLILVNPATSF 232 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~~ 232 (709)
|||+||.+|+.+|..+|+ .++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 158 GQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp EETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred ecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 999999999999988765 48999999987653
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=160.50 Aligned_cols=102 Identities=18% Similarity=-0.025 Sum_probs=82.2
Q ss_pred CCCEEEEeCCCC---CCcc--cHHHHHHHhc-CCceEEEEeCCCC----CCCCHHHHHHHHHHHHHHhhcc---CCCCCE
Q 005190 131 DSPLLLFLPGID---GVGL--GLIRQHQRLG-KIFDIWCLHIPVK----DRTSFTGLVKLVESTVRSESNR---SPKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~--~~~~~~~~L~-~~~~Vi~~Dl~G~----G~Ss~~~~~~dl~~~l~~~~~~---~~~~~v 197 (709)
..|+||++||.+ ++.. .|..+...|+ .++.|+++|+||+ +.+.......|+.++++.+... .+.+++
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i 187 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGV 187 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeE
Confidence 358999999987 7777 8888899996 8999999999999 4445555566666666655543 234489
Q ss_pred EEEEechhHHHHHHHHHh-----CCCceeEEEEecCCCCc
Q 005190 198 YLVGESLGACIALAVAAR-----NPDIDLVLILVNPATSF 232 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~-----~P~~v~~lVl~~p~~~~ 232 (709)
+|+|||+||.+++.+|.. +|+.++++|+++|....
T Consensus 188 ~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 188 VVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 999999999999999998 88899999999987654
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=9.1e-15 Score=146.48 Aligned_cols=193 Identities=16% Similarity=0.143 Sum_probs=127.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
++++|||+||++++...|..+...|..+++|+++|+||++ ++++++.+.++.+ .+..+++|+||||||.+|+
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~-----~~~~~~~~~i~~~---~~~~~~~l~GhS~Gg~va~ 92 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEED-----SRIEQYVSRITEI---QPEGPYVLLGYSAGGNLAF 92 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCST-----THHHHHHHHHHHH---CSSSCEEEEEETHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHH-----HHHHHHHHHHHHh---CCCCCEEEEEECHhHHHHH
Confidence 3678999999999999999999999889999999999985 4566766666653 2246899999999999999
Q ss_pred HHHHhC---CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHH
Q 005190 211 AVAARN---PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL 287 (709)
Q Consensus 211 ~~A~~~---P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (709)
.+|.+. ++.+.++|++++..... .+.. ... . ..+..+. . ......
T Consensus 93 ~~a~~~~~~~~~v~~lvl~~~~~~~~--~~~~-------~~~--~----~~~~~~~-~----------------~~~~~~ 140 (244)
T 2cb9_A 93 EVVQAMEQKGLEVSDFIIVDAYKKDQ--SITA-------DTE--N----DDSAAYL-P----------------EAVRET 140 (244)
T ss_dssp HHHHHHHHTTCCEEEEEEESCCCCCS--CCCC-------C-------------CCS-C----------------HHHHHH
T ss_pred HHHHHHHHcCCCccEEEEEcCCCCcc--cccc-------ccc--H----HHHHHHh-H----------------HHHHHH
Confidence 999876 57899999998854311 0000 000 0 0000000 0 000000
Q ss_pred HHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeC--CCCCCCcHHHHHHHHhhcC-CcEE
Q 005190 288 SQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG--KDQLMPSQEEGERLSSALH-KCEP 364 (709)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~--~D~~v~~~~~~~~l~~~~~-~~~~ 364 (709)
+. . .+ ........ .......+++|+++++|+ +|.+ ++.. ...+.+..+ ++++
T Consensus 141 ~~---~---------------~~----~~~~~~~~-~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~-~~~w~~~~~~~~~~ 195 (244)
T 2cb9_A 141 VM---Q---------------KK----RCYQEYWA-QLINEGRIKSNIHFIEAGIQTETS-GAMV-LQKWQDAAEEGYAE 195 (244)
T ss_dssp HT---H---------------HH----HHHHHHHH-HCCCCSCBSSEEEEEECSBCSCCC-HHHH-TTSSGGGBSSCEEE
T ss_pred HH---H---------------HH----HHHHHHHH-hhccCCCcCCCEEEEEccCccccc-cccc-hhHHHHhcCCCCEE
Confidence 00 0 00 00000000 012356789999999999 8874 3443 455666554 6899
Q ss_pred EEEcCCCc--cccccChhhHHHHHhhc
Q 005190 365 RNFYGHGH--FLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 365 ~~i~~aGH--~~~le~p~~~~~~I~~~ 389 (709)
+.+++ || ++..++++.+++.|.+|
T Consensus 196 ~~i~g-gH~~~~~~~~~~~~~~~i~~~ 221 (244)
T 2cb9_A 196 YTGYG-AHKDMLEGEFAEKNANIILNI 221 (244)
T ss_dssp EECSS-BGGGTTSHHHHHHHHHHHHHH
T ss_pred EEecC-ChHHHcChHHHHHHHHHHHHH
Confidence 99996 99 77778899999999954
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.62 E-value=7.6e-15 Score=169.24 Aligned_cols=199 Identities=15% Similarity=0.112 Sum_probs=133.2
Q ss_pred CCCEEEEeCCCCCCcc--cHHHHHHHhc-CCceEEEEeCCC---CCCC-------CH-HHHHHHHHHHHHHhhcc--CCC
Q 005190 131 DSPLLLFLPGIDGVGL--GLIRQHQRLG-KIFDIWCLHIPV---KDRT-------SF-TGLVKLVESTVRSESNR--SPK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~--~~~~~~~~L~-~~~~Vi~~Dl~G---~G~S-------s~-~~~~~dl~~~l~~~~~~--~~~ 194 (709)
..|+||++||.+++.. .|..++..|+ +||.|+++|+|| ||.+ .+ ....+|+.+.++++... ...
T Consensus 423 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 502 (662)
T 3azo_A 423 LPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADR 502 (662)
T ss_dssp CCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCT
T ss_pred CccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcCh
Confidence 5789999999987665 7888888884 689999999999 7765 11 12356666666666554 445
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHh-hchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
.+++|+||||||.+++.++.. |++++++|+++|....... .. ....... .+.....+..
T Consensus 503 ~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~--------~~~~~~~~~~----~~~~~~~~~~------- 562 (662)
T 3azo_A 503 ARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGW--------ADGGTHDFES----RYLDFLIGSF------- 562 (662)
T ss_dssp TCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHH--------HTTCSCGGGT----THHHHHTCCT-------
T ss_pred hhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHH--------hcccccchhh----HhHHHHhCCC-------
Confidence 789999999999999998886 9999999999885432110 00 0000000 0000000000
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 353 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~ 353 (709)
+ .... .+. .......+.++++|+|+++|++|..++.+. ++
T Consensus 563 --------------------------------~-~~~~----~~~--~~sp~~~~~~~~~P~lii~G~~D~~vp~~~-~~ 602 (662)
T 3azo_A 563 --------------------------------E-EFPE----RYR--DRAPLTRADRVRVPFLLLQGLEDPVCPPEQ-CD 602 (662)
T ss_dssp --------------------------------T-TCHH----HHH--HTCGGGGGGGCCSCEEEEEETTCSSSCTHH-HH
T ss_pred --------------------------------c-cchh----HHH--hhChHhHhccCCCCEEEEeeCCCCCCCHHH-HH
Confidence 0 0000 000 001123457788999999999999999997 88
Q ss_pred HHHhhcCCc----EEEEEcCCCcccc-ccChhhHHHHHhhc
Q 005190 354 RLSSALHKC----EPRNFYGHGHFLL-LEDGVDLVTIIKGA 389 (709)
Q Consensus 354 ~l~~~~~~~----~~~~i~~aGH~~~-le~p~~~~~~I~~~ 389 (709)
.+.+.+++. ++++++++||.+. .+++.++.+.+.+|
T Consensus 603 ~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~f 643 (662)
T 3azo_A 603 RFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSL 643 (662)
T ss_dssp HHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHH
Confidence 888877754 8999999999874 35667777777744
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-14 Score=152.33 Aligned_cols=199 Identities=16% Similarity=0.151 Sum_probs=132.2
Q ss_pred EEEEeCC--CCCCcccHHHHHHHhcCCceEEEEeCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 134 LLLFLPG--IDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 134 ~Vv~lHG--~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
+|+|+|| ++++...|..+...|..+++|+++|+||+|.+ +++++++++.+.++... +..+++|+|
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~---~~~p~~l~G 167 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA---GDAPVVLLG 167 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH---TTSCEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhc---CCCCEEEEE
Confidence 8999998 67888999999999999999999999999975 57888888888776632 356899999
Q ss_pred echhHHHHHHHHHhC----CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhc
Q 005190 202 ESLGACIALAVAARN----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (709)
Q Consensus 202 hS~GG~iAl~~A~~~----P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (709)
|||||.+|+.+|.+. ++.|+++|++++........ ...++..++ ...+.. .
T Consensus 168 ~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~---~~~~~~~l~-------~~~~~~---------------~ 222 (319)
T 2hfk_A 168 HAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP---IEVWSRQLG-------EGLFAG---------------E 222 (319)
T ss_dssp ETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH---HHHTHHHHH-------HHHHHT---------------C
T ss_pred ECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH---HHHHHHHhh-------HHHHHh---------------h
Confidence 999999999999987 46799999999864422110 000000000 000000 0
Q ss_pred cCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005190 278 LSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 357 (709)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~ 357 (709)
.... . ..+... +......+. ......+++|+++++| +|.+++.......+.+
T Consensus 223 ~~~~--~---~~~~~~----------------~~~~~~~~~------~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~ 274 (319)
T 2hfk_A 223 LEPM--S---DARLLA----------------MGRYARFLA------GPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRA 274 (319)
T ss_dssp SSCC--C---HHHHHH----------------HHHHHHHHH------SCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSC
T ss_pred cccc--c---hHHHHH----------------HHHHHHHHH------hCCCCCcCCCEEEEEc-CCCCCCccccccchhh
Confidence 0000 0 000000 000000110 1234778999999999 9998876531334555
Q ss_pred hcC-CcEEEEEcCCCccccc-cChhhHHHHHhhc
Q 005190 358 ALH-KCEPRNFYGHGHFLLL-EDGVDLVTIIKGA 389 (709)
Q Consensus 358 ~~~-~~~~~~i~~aGH~~~l-e~p~~~~~~I~~~ 389 (709)
..+ +.+++.++ +||+.++ ++++.+++.|.+|
T Consensus 275 ~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~ 307 (319)
T 2hfk_A 275 HWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSW 307 (319)
T ss_dssp CCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHH
Confidence 544 58999999 5999755 7999999999955
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.4e-15 Score=149.53 Aligned_cols=98 Identities=20% Similarity=0.173 Sum_probs=75.3
Q ss_pred CCEEEEeCCCCCCc---ccHHHHHHHhcC---CceEEEEeCCCCCCCC------HHHHHHHHHHHHHHhhccCC-CCCEE
Q 005190 132 SPLLLFLPGIDGVG---LGLIRQHQRLGK---IFDIWCLHIPVKDRTS------FTGLVKLVESTVRSESNRSP-KRPVY 198 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~---~~~~~~~~~L~~---~~~Vi~~Dl~G~G~Ss------~~~~~~dl~~~l~~~~~~~~-~~~v~ 198 (709)
.++|||+||++++. ..|..+.+.|++ +++|+++|+ |||.|+ +.++.+++.++++.+..... .++++
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 83 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYN 83 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEE
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCEE
Confidence 44699999999988 789999999964 669999998 999762 12334444444444433111 26899
Q ss_pred EEEechhHHHHHHHHHhCCCc-eeEEEEecCCC
Q 005190 199 LVGESLGACIALAVAARNPDI-DLVLILVNPAT 230 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~-v~~lVl~~p~~ 230 (709)
||||||||.+|..+|.++|+. |+++|+++++.
T Consensus 84 lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 999999999999999999985 99999998643
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=146.61 Aligned_cols=154 Identities=18% Similarity=0.122 Sum_probs=102.6
Q ss_pred CCCEEEEeCCCCCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCCC--------------------------HHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRTS--------------------------FTGLVKLV 181 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss--------------------------~~~~~~dl 181 (709)
..|+||++||++++.. .+..+++.| ++||.|+++|+||||.|. ......|.
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 134 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADW 134 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHH
Confidence 3678999999988753 566788888 589999999999999871 12334556
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhh
Q 005190 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261 (709)
Q Consensus 182 ~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (709)
...++.+.......++.++|+|+||.+++.+|+..|+.. +.|+..+......
T Consensus 135 ~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pri~-Aav~~~~~~~~~~--------------------------- 186 (259)
T 4ao6_A 135 AAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKRIK-VALLGLMGVEGVN--------------------------- 186 (259)
T ss_dssp HHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTTEE-EEEEESCCTTSTT---------------------------
T ss_pred HHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCceE-EEEEecccccccc---------------------------
Confidence 666666665556789999999999999999999988644 4444322111000
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeC
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG 341 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~ 341 (709)
..+ ......+|++|+|+++|+
T Consensus 187 --------------------------~~~---------------------------------~~~~a~~i~~P~Li~hG~ 207 (259)
T 4ao6_A 187 --------------------------GED---------------------------------LVRLAPQVTCPVRYLLQW 207 (259)
T ss_dssp --------------------------HHH---------------------------------HHHHGGGCCSCEEEEEET
T ss_pred --------------------------ccc---------------------------------hhhhhccCCCCEEEEecC
Confidence 000 002236789999999999
Q ss_pred CCCCCCcHHHHHHHHhhcC--CcEEEEEcCCCcc
Q 005190 342 KDQLMPSQEEGERLSSALH--KCEPRNFYGHGHF 373 (709)
Q Consensus 342 ~D~~v~~~~~~~~l~~~~~--~~~~~~i~~aGH~ 373 (709)
+|.++|++. +..+.+.+. +.+++++++ +|.
T Consensus 208 ~D~~vp~~~-~~~l~~al~~~~k~l~~~~G-~H~ 239 (259)
T 4ao6_A 208 DDELVSLQS-GLELFGKLGTKQKTLHVNPG-KHS 239 (259)
T ss_dssp TCSSSCHHH-HHHHHHHCCCSSEEEEEESS-CTT
T ss_pred CCCCCCHHH-HHHHHHHhCCCCeEEEEeCC-CCC
Confidence 999999997 888888765 456778886 664
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.5e-15 Score=146.74 Aligned_cols=178 Identities=20% Similarity=0.207 Sum_probs=116.3
Q ss_pred CCCEEEEeCCCCCCcccHHH----HHHHhcC-CceEEEEeCC---------------------CCCCC------------
Q 005190 131 DSPLLLFLPGIDGVGLGLIR----QHQRLGK-IFDIWCLHIP---------------------VKDRT------------ 172 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~----~~~~L~~-~~~Vi~~Dl~---------------------G~G~S------------ 172 (709)
..|+|||+||++++...|.. +.+.|.+ +|+|+++|+| |+|.+
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 46789999999999998874 5666654 8999999999 55654
Q ss_pred -CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC------CceeEEEEecCCCCcchhhhhhhhHHHh
Q 005190 173 -SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP------DIDLVLILVNPATSFNKSVLQSTIPLLE 245 (709)
Q Consensus 173 -s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P------~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 245 (709)
++.+.++.+.+.++. . ..+++|+||||||.+|+.+|.+++ ..++.++++++........
T Consensus 84 ~d~~~~~~~l~~~~~~----~-~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~--------- 149 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKA----N-GPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP--------- 149 (243)
T ss_dssp CCCHHHHHHHHHHHHH----H-CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---------
T ss_pred hhHHHHHHHHHHHHHh----c-CCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---------
Confidence 234444445444433 1 256899999999999999998753 2355666665533211000
Q ss_pred hchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhh
Q 005190 246 LIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYAN 325 (709)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (709)
... +.. . +..+ +.. ..
T Consensus 150 ~~~---------------~~~----------~---------~~~~----------~~~--------------------~~ 165 (243)
T 1ycd_A 150 EHP---------------GEL----------R---------ITEK----------FRD--------------------SF 165 (243)
T ss_dssp TST---------------TCE----------E---------ECGG----------GTT--------------------TT
T ss_pred ccc---------------ccc----------c---------cchh----------HHH--------------------hc
Confidence 000 000 0 0000 000 00
Q ss_pred hhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCc-------EEEEEcCCCccccccChhhHHHHHhhc
Q 005190 326 SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC-------EPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 326 ~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~-------~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
..+.++++|+|+++|++|.+++.+. ++.+.+.+++. ...+++++||++..++ .+.+.|.+|
T Consensus 166 ~~~~~~~~P~l~i~G~~D~~vp~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~~--~~~~~i~~f 233 (243)
T 1ycd_A 166 AVKPDMKTKMIFIYGASDQAVPSVR-SKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNKK--DIIRPIVEQ 233 (243)
T ss_dssp CCCTTCCCEEEEEEETTCSSSCHHH-HHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCCH--HHHHHHHHH
T ss_pred cCcccCCCCEEEEEeCCCCccCHHH-HHHHHHHhhhhccccccccEEEecCCCCcCCchH--HHHHHHHHH
Confidence 1235689999999999999999996 88888766543 6677888999987653 466666643
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=168.43 Aligned_cols=195 Identities=15% Similarity=0.055 Sum_probs=133.6
Q ss_pred CCCEEEEeCCCCCCcc---cHH-HHHHHh--cCCceEEEEeCCCCCCCCH-----------HHHHHHHHHHHHHhhccC-
Q 005190 131 DSPLLLFLPGIDGVGL---GLI-RQHQRL--GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESNRS- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~---~~~-~~~~~L--~~~~~Vi~~Dl~G~G~Ss~-----------~~~~~dl~~~l~~~~~~~- 192 (709)
..|+||++||.+++.. .|. .+...| .+||.|+++|+||+|.+.. ....+|+.++++.+....
T Consensus 495 ~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (719)
T 1z68_A 495 KYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGF 574 (719)
T ss_dssp CEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSC
T ss_pred CccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCC
Confidence 4678999999987643 332 244444 4799999999999999832 245778888888876642
Q ss_pred -CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHH
Q 005190 193 -PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (709)
Q Consensus 193 -~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (709)
...+++|+||||||.+|+.+|.++|+.++++|+++|........ . .+.....+.+.
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----~--------------~~~~~~~g~~~---- 631 (719)
T 1z68_A 575 IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYA-----S--------------VYTERFMGLPT---- 631 (719)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSB-----H--------------HHHHHHHCCSS----
T ss_pred CCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhc-----c--------------ccchhhcCCcc----
Confidence 13689999999999999999999999999999998865421100 0 00000000000
Q ss_pred HHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCc-cEEEEeeCCCCCCCcHH
Q 005190 272 DNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKA-QMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLvi~G~~D~~v~~~~ 350 (709)
..... ..+. .......+.++++ |+|+++|++|..++.+.
T Consensus 632 --------~~~~~-~~~~-------------------------------~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~ 671 (719)
T 1z68_A 632 --------KDDNL-EHYK-------------------------------NSTVMARAEYFRNVDYLLIHGTADDNVHFQN 671 (719)
T ss_dssp --------TTTTH-HHHH-------------------------------HTCSGGGGGGGTTSEEEEEEETTCSSSCTHH
T ss_pred --------cccch-hhhh-------------------------------hCCHhHHHhcCCCCcEEEEEeCCCCCcCHHH
Confidence 00000 0000 0001133466777 89999999999999986
Q ss_pred HHHHHHhhcC----CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 351 EGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+.+.++ .+++++++++||.+..++++++.+.+.+|
T Consensus 672 -~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 713 (719)
T 1z68_A 672 -SAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHF 713 (719)
T ss_dssp -HHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHH
Confidence 777776543 46799999999999777788888888844
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-14 Score=145.70 Aligned_cols=159 Identities=18% Similarity=0.197 Sum_probs=115.1
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHHHhc---CCceEEEEeCC------CCCCC-----------------CHHHHHHHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIP------VKDRT-----------------SFTGLVKLVE 182 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~Dl~------G~G~S-----------------s~~~~~~dl~ 182 (709)
.+..|+|||+||+|++...|..+.+.|. .++.+++++-| |.|.+ .+.+..+++.
T Consensus 63 ~~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~ 142 (285)
T 4fhz_A 63 GEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLD 142 (285)
T ss_dssp TCCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHH
Confidence 4457789999999999999998888885 36788888754 44432 1223345566
Q ss_pred HHHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhh
Q 005190 183 STVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (709)
Q Consensus 183 ~~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (709)
++++.+.... +.++++|+|+|+||.+|+.+|.++|+.+.++|.+++......
T Consensus 143 ~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~-------------------------- 196 (285)
T 4fhz_A 143 AFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPE-------------------------- 196 (285)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHH--------------------------
T ss_pred HHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCch--------------------------
Confidence 6666654433 346899999999999999999999999999998866321100
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEee
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G 340 (709)
.. ......++|+++++|
T Consensus 197 -------------------------~~--------------------------------------~~~~~~~~Pvl~~hG 213 (285)
T 4fhz_A 197 -------------------------RL--------------------------------------AEEARSKPPVLLVHG 213 (285)
T ss_dssp -------------------------HH--------------------------------------HHHCCCCCCEEEEEE
T ss_pred -------------------------hh--------------------------------------hhhhhhcCcccceee
Confidence 00 000234689999999
Q ss_pred CCCCCCCcHHHHHHHHhhc----CCcEEEEEcCCCcccccc
Q 005190 341 GKDQLMPSQEEGERLSSAL----HKCEPRNFYGHGHFLLLE 377 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~----~~~~~~~i~~aGH~~~le 377 (709)
++|.++|.+. .+.+.+.+ .+++++++++.||.+..+
T Consensus 214 ~~D~~Vp~~~-~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~ 253 (285)
T 4fhz_A 214 DADPVVPFAD-MSLAGEALAEAGFTTYGHVMKGTGHGIAPD 253 (285)
T ss_dssp TTCSSSCTHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCHH
T ss_pred CCCCCcCHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCHH
Confidence 9999999986 66665533 367899999999987543
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=8e-14 Score=142.45 Aligned_cols=101 Identities=12% Similarity=-0.022 Sum_probs=87.0
Q ss_pred CCCEEEEeCCCCCCc-ccHH-HHHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005190 131 DSPLLLFLPGIDGVG-LGLI-RQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~-~~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~ 207 (709)
++++|||+||++++. ..|. .+.+.|. ++|+|+++|+||||.++....++++.++++.+....+.++++||||||||.
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGl 143 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGL 143 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHH
Confidence 466899999999998 6888 8999995 689999999999999988777788888888777767678999999999999
Q ss_pred HHHHHHHhC---CCceeEEEEecCCCC
Q 005190 208 IALAVAARN---PDIDLVLILVNPATS 231 (709)
Q Consensus 208 iAl~~A~~~---P~~v~~lVl~~p~~~ 231 (709)
++..++..+ +++|+++|++++...
T Consensus 144 vA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 144 VAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHhccccchhhceEEEECCCCC
Confidence 997777765 589999999988654
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4e-14 Score=148.04 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=86.2
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc-CCCCCEEEEEech
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-SPKRPVYLVGESL 204 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~-~~~~~v~LvGhS~ 204 (709)
..|+||++||.+ ++...|..++..|+ .+|.|+++|+|+.+...+....+|+.+.++++... .+..+++|+|||+
T Consensus 79 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~ 158 (322)
T 3fak_A 79 AGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSA 158 (322)
T ss_dssp TTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHTCCGGGEEEEEETH
T ss_pred CccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEcCc
Confidence 478999999965 66677888888885 48999999999999888888888888888887765 4456899999999
Q ss_pred hHHHHHHHHHhCCCc----eeEEEEecCCCCc
Q 005190 205 GACIALAVAARNPDI----DLVLILVNPATSF 232 (709)
Q Consensus 205 GG~iAl~~A~~~P~~----v~~lVl~~p~~~~ 232 (709)
||.+|+.+|...++. ++++|+++|....
T Consensus 159 GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3fak_A 159 GGGLVLAVLVSARDQGLPMPASAIPISPWADM 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred CHHHHHHHHHHHHhcCCCCceEEEEECCEecC
Confidence 999999999887664 8999999997654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=169.52 Aligned_cols=193 Identities=14% Similarity=0.054 Sum_probs=132.7
Q ss_pred CCCEEEEeCCCCCCc---ccHH--HHHHHhc-CCceEEEEeCCCCCCC-------CH----HHHHHHHHHHHHHhhccC-
Q 005190 131 DSPLLLFLPGIDGVG---LGLI--RQHQRLG-KIFDIWCLHIPVKDRT-------SF----TGLVKLVESTVRSESNRS- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~---~~~~--~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~----~~~~~dl~~~l~~~~~~~- 192 (709)
..|+||++||.+++. ..|. .....|+ .||.|+++|+||+|.+ .. ....+|+.+.++.+....
T Consensus 495 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (723)
T 1xfd_A 495 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 574 (723)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCC
Confidence 467899999998763 2333 4556665 7999999999999985 11 145677777777766542
Q ss_pred -CCCCEEEEEechhHHHHHHHHHhC----CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 193 -PKRPVYLVGESLGACIALAVAARN----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 193 -~~~~v~LvGhS~GG~iAl~~A~~~----P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
...+++|+||||||.+|+.+|.++ |++++++|++++........ . .+.....+.+.
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~------------~-------~~~~~~~~~~~ 635 (723)
T 1xfd_A 575 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA------------S-------AFSERYLGLHG 635 (723)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB------------H-------HHHHHHHCCCS
T ss_pred cChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhh------------h-------hccHhhcCCcc
Confidence 246899999999999999999999 99999999998865421100 0 00000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCC-ccEEEEeeCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVK-AQMLVLCSGKDQLM 346 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLvi~G~~D~~v 346 (709)
.... . +.. ......+.+++ +|+|+++|++|..+
T Consensus 636 -----------~~~~----~-----------------~~~--------------~~~~~~~~~~~~~P~lii~G~~D~~v 669 (723)
T 1xfd_A 636 -----------LDNR----A-----------------YEM--------------TKVAHRVSALEEQQFLIIHPTADEKI 669 (723)
T ss_dssp -----------SCCS----S-----------------TTT--------------TCTHHHHTSCCSCEEEEEEETTCSSS
T ss_pred -----------CChh----H-----------------HHh--------------cChhhHHhhcCCCCEEEEEeCCCCCc
Confidence 0000 0 000 00012346788 89999999999999
Q ss_pred CcHHHHHHHHhhc----CCcEEEEEcCCCccc-cccChhhHHHHHhhc
Q 005190 347 PSQEEGERLSSAL----HKCEPRNFYGHGHFL-LLEDGVDLVTIIKGA 389 (709)
Q Consensus 347 ~~~~~~~~l~~~~----~~~~~~~i~~aGH~~-~le~p~~~~~~I~~~ 389 (709)
+.+. ++.+.+.+ +++++++++++||.+ ..++++++.+.+.+|
T Consensus 670 ~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 716 (723)
T 1xfd_A 670 HFQH-TAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINF 716 (723)
T ss_dssp CHHH-HHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHH
T ss_pred CHhH-HHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHH
Confidence 9986 77776654 468999999999998 677888888888844
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-14 Score=166.79 Aligned_cols=195 Identities=15% Similarity=0.062 Sum_probs=130.3
Q ss_pred CCCEEEEeCCCCCCc---ccHH-HHHHHh--cCCceEEEEeCCCCCCCCH-----------HHHHHHHHHHHHHhhccC-
Q 005190 131 DSPLLLFLPGIDGVG---LGLI-RQHQRL--GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESNRS- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~---~~~~-~~~~~L--~~~~~Vi~~Dl~G~G~Ss~-----------~~~~~dl~~~l~~~~~~~- 192 (709)
..|+||++||.+++. ..|. .+...+ .+||.|+++|+||+|.+.. ....+|+.++++++....
T Consensus 501 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 580 (740)
T 4a5s_A 501 KYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGF 580 (740)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTT
T ss_pred CccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCC
Confidence 467999999998773 2232 233444 3799999999999997721 124677777887776432
Q ss_pred -CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHH
Q 005190 193 -PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (709)
Q Consensus 193 -~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (709)
...++.|+||||||.+|+.+|.++|+.++++|+++|........ . .+.....+.+
T Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~-----~--------------~~~~~~~~~p----- 636 (740)
T 4a5s_A 581 VDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD-----S--------------VYTERYMGLP----- 636 (740)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB-----H--------------HHHHHHHCCS-----
T ss_pred cCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhh-----h--------------HHHHHHcCCC-----
Confidence 12689999999999999999999999999999998865421100 0 0000000000
Q ss_pred HHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCc-cEEEEeeCCCCCCCcHH
Q 005190 272 DNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKA-QMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLvi~G~~D~~v~~~~ 350 (709)
...... ..+. .......+.++++ |+|+++|++|..++.+.
T Consensus 637 -------~~~~~~-~~~~-------------------------------~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~ 677 (740)
T 4a5s_A 637 -------TPEDNL-DHYR-------------------------------NSTVMSRAENFKQVEYLLIHGTADDNVHFQQ 677 (740)
T ss_dssp -------STTTTH-HHHH-------------------------------HSCSGGGGGGGGGSEEEEEEETTCSSSCTHH
T ss_pred -------CccccH-HHHH-------------------------------hCCHHHHHhcCCCCcEEEEEcCCCCccCHHH
Confidence 000000 0000 0001133456776 99999999999999986
Q ss_pred HHHHHHhhc----CCcEEEEEcCCCccc-cccChhhHHHHHhhc
Q 005190 351 EGERLSSAL----HKCEPRNFYGHGHFL-LLEDGVDLVTIIKGA 389 (709)
Q Consensus 351 ~~~~l~~~~----~~~~~~~i~~aGH~~-~le~p~~~~~~I~~~ 389 (709)
+..+.+.+ .++++++++++||.+ ..+.++.+.+.+.+|
T Consensus 678 -~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 720 (740)
T 4a5s_A 678 -SAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF 720 (740)
T ss_dssp -HHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHH
Confidence 77776654 357999999999999 667788888888854
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-14 Score=151.71 Aligned_cols=98 Identities=11% Similarity=0.112 Sum_probs=78.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCC-----------------------------------H
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTS-----------------------------------F 174 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss-----------------------------------~ 174 (709)
..|+|||+||++++...|..+++.|+ +||.|+++|++|+|.|. +
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 176 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQV 176 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHHH
Confidence 46789999999999999999999995 78999999999998762 1
Q ss_pred HHHHHHHHHHHHHhhc----------------------cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 175 TGLVKLVESTVRSESN----------------------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~----------------------~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
+..++|+..+++.+.. ..+..++.++|||+||.+|+.++...+ +++++|++++.
T Consensus 177 ~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 177 RQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCc
Confidence 1224677777776543 122358999999999999999988766 58999998873
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.5e-14 Score=149.28 Aligned_cols=103 Identities=15% Similarity=0.127 Sum_probs=84.6
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc-----CCCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-----SPKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~-----~~~~~v~Lv 200 (709)
..|+||++||.+ ++...|..++..|+ .++.|+++|+|+.+...+....+|+.+.++.+... ....+++|+
T Consensus 84 ~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~ 163 (317)
T 3qh4_A 84 PAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVA 163 (317)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCchHHHHHHHHHHHHHhhHHhhCCCcceEEEE
Confidence 478999999877 67778888888885 48999999999998888877788887777776653 223589999
Q ss_pred EechhHHHHHHHHHhCCC----ceeEEEEecCCCCcc
Q 005190 201 GESLGACIALAVAARNPD----IDLVLILVNPATSFN 233 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~~~ 233 (709)
|||+||.+|+.+|..+++ .+.++++++|.....
T Consensus 164 G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 164 GSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp EETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred EECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 999999999999987655 488999999976643
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-13 Score=159.95 Aligned_cols=198 Identities=11% Similarity=0.081 Sum_probs=127.7
Q ss_pred CCCCEEEEeCCCCCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCCC-----------HHHHHHHHHHHHHHhhccC--C
Q 005190 130 RDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRTS-----------FTGLVKLVESTVRSESNRS--P 193 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss-----------~~~~~~dl~~~l~~~~~~~--~ 193 (709)
...|+||++||.++... .|......| .+||.|+++|+||+|.+. .....+|+.++++++.... .
T Consensus 444 ~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 523 (695)
T 2bkl_A 444 GNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQ 523 (695)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 35789999999766554 455444444 689999999999988761 2344577777777766543 2
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
..+++++|||+||.+++.+|.++|++++++|+.+|......... .+.. ..+... .+.+
T Consensus 524 ~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~---------~~~~-----~~~~~~-~g~~------- 581 (695)
T 2bkl_A 524 PKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHL---------FGSG-----RTWIPE-YGTA------- 581 (695)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG---------STTG-----GGGHHH-HCCT-------
T ss_pred cccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccc---------cCCC-----cchHHH-hCCC-------
Confidence 46899999999999999999999999999999988654321100 0000 000000 0000
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCC--ccEEEEeeCCCCCCCcHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVK--AQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLvi~G~~D~~v~~~~~ 351 (709)
... ..+ ..+... .....+..++ +|+|+++|++|..+++..
T Consensus 582 ------~~~---~~~--------------------------~~~~~~--sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~- 623 (695)
T 2bkl_A 582 ------EKP---EDF--------------------------KTLHAY--SPYHHVRPDVRYPALLMMAADHDDRVDPMH- 623 (695)
T ss_dssp ------TSH---HHH--------------------------HHHHHH--CGGGCCCSSCCCCEEEEEEETTCSSSCTHH-
T ss_pred ------CCH---HHH--------------------------HHHHhc--ChHhhhhhcCCCCCEEEEeeCCCCCCChHH-
Confidence 000 000 000000 1112344444 699999999999999997
Q ss_pred HHHHHhhcC-------CcEEEEEcCCCcccc--ccChhhHHHHHh
Q 005190 352 GERLSSALH-------KCEPRNFYGHGHFLL--LEDGVDLVTIIK 387 (709)
Q Consensus 352 ~~~l~~~~~-------~~~~~~i~~aGH~~~--le~p~~~~~~I~ 387 (709)
+.++.+.++ .+++++++++||... .++..+....+.
T Consensus 624 ~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 668 (695)
T 2bkl_A 624 ARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLY 668 (695)
T ss_dssp HHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH
Confidence 777777554 378999999999984 344555555555
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=6e-14 Score=143.00 Aligned_cols=98 Identities=12% Similarity=0.236 Sum_probs=76.6
Q ss_pred CCCEEEEeCCCCCCcccHHHH---HHHhc-CCceEEEEeCCCCCCC---C---------------------------HHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ---HQRLG-KIFDIWCLHIPVKDRT---S---------------------------FTG 176 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~---~~~L~-~~~~Vi~~Dl~G~G~S---s---------------------------~~~ 176 (709)
..|+||++||++++...|... ...+. .++.|+++|.+|+|.| . .+.
T Consensus 43 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (278)
T 3e4d_A 43 PCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSY 122 (278)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHH
Confidence 467999999999999888773 33333 4899999999999976 1 112
Q ss_pred HHHHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 177 LVKLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 177 ~~~dl~~~l~~~~~~~~~--~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+.+++...++. ..+. .+++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 123 ~~~~~~~~~~~---~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 123 VTEELPALIGQ---HFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVA 176 (278)
T ss_dssp HHTHHHHHHHH---HSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHh---hcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCccc
Confidence 33455555554 3333 7899999999999999999999999999999998655
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-13 Score=158.69 Aligned_cols=197 Identities=12% Similarity=0.021 Sum_probs=125.6
Q ss_pred CCCEEEEeCCCCCCccc--HHHHHHHh-c-CCceEEEEeCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--C
Q 005190 131 DSPLLLFLPGIDGVGLG--LIRQHQRL-G-KIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS--P 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~--~~~~~~~L-~-~~~~Vi~~Dl~G~G~S--s~---------~~~~~dl~~~l~~~~~~~--~ 193 (709)
..|+||++||.+++... |......| + +||.|+++|+||+|.+ .+ ....+|+.++++++.... .
T Consensus 465 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 544 (710)
T 2xdw_A 465 SHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTS 544 (710)
T ss_dssp CSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCC
Confidence 57899999998766543 44433344 6 8999999999999987 11 233466666666665442 3
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
..+++++|||+||.+++.+|.++|++++++|+.+|........... ... .+... .+.+
T Consensus 545 ~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~-------~~~-------~~~~~-~g~~------- 602 (710)
T 2xdw_A 545 PKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT-------IGH-------AWTTD-YGCS------- 602 (710)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST-------TGG-------GGHHH-HCCT-------
T ss_pred cceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccC-------CCh-------hHHHh-CCCC-------
Confidence 4689999999999999999999999999999998865432111000 000 00000 0000
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcc-----cCCc-cEEEEeeCCCCCCC
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLH-----AVKA-QMLVLCSGKDQLMP 347 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~i~~-PvLvi~G~~D~~v~ 347 (709)
...+. . ..+.. ......+. .+++ |+|+++|++|..++
T Consensus 603 -----~~~~~----~--------------------------~~~~~--~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~ 645 (710)
T 2xdw_A 603 -----DSKQH----F--------------------------EWLIK--YSPLHNVKLPEADDIQYPSMLLLTADHDDRVV 645 (710)
T ss_dssp -----TSHHH----H--------------------------HHHHH--HCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC
T ss_pred -----CCHHH----H--------------------------HHHHH--hCcHhhhcccccccCCCCcEEEEEeCCCCccC
Confidence 00000 0 00000 00112334 6777 99999999999999
Q ss_pred cHHHHHHHHhhcC-----------CcEEEEEcCCCcccccc--ChhhHHHHHh
Q 005190 348 SQEEGERLSSALH-----------KCEPRNFYGHGHFLLLE--DGVDLVTIIK 387 (709)
Q Consensus 348 ~~~~~~~l~~~~~-----------~~~~~~i~~aGH~~~le--~p~~~~~~I~ 387 (709)
+.. +.++.+.++ .+++++++++||..... +..++.+.+.
T Consensus 646 ~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 697 (710)
T 2xdw_A 646 PLH-SLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMF 697 (710)
T ss_dssp THH-HHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHH
T ss_pred hhH-HHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHH
Confidence 986 777766543 34899999999998764 2345555555
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=146.55 Aligned_cols=102 Identities=18% Similarity=0.091 Sum_probs=83.3
Q ss_pred CCCEEEEeCCCCC---Ccc--cHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc------CCCC-C
Q 005190 131 DSPLLLFLPGIDG---VGL--GLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR------SPKR-P 196 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~~--~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~------~~~~-~ 196 (709)
..|+||++||.+. +.. .|..++..|+ .++.|+++|+|+.+...+....+|+.++++++... .... +
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~r 190 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 190 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHCTTTEETTTTEEE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCcHHHHHHHHHHHHHHhCchhhhCCCCCCc
Confidence 5789999999753 222 3677888885 38999999999988888888889999999888743 2334 8
Q ss_pred EEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCCCc
Q 005190 197 VYLVGESLGACIALAVAARNPD---IDLVLILVNPATSF 232 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~~P~---~v~~lVl~~p~~~~ 232 (709)
++|+|||+||.+|+.+|.+.++ .++++|+++|....
T Consensus 191 i~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~ 229 (365)
T 3ebl_A 191 VFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGG 229 (365)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCC
T ss_pred EEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCC
Confidence 9999999999999999988765 79999999997654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-13 Score=159.41 Aligned_cols=198 Identities=13% Similarity=0.029 Sum_probs=120.4
Q ss_pred CCCEEEEeCCCCCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--CC
Q 005190 131 DSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS--PK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~---------~~~~~dl~~~l~~~~~~~--~~ 194 (709)
..|+||++||.+++.. .|......| .+||.|+++|+||+|.+ .+ ....+|+.++++++.... ..
T Consensus 487 ~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~ 566 (741)
T 1yr2_A 487 PLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPR 566 (741)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCT
T ss_pred CCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCh
Confidence 4789999999877655 455555555 68999999999999987 22 223567777777665542 34
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHH
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (709)
.+++++|||+||.+++.++.++|++++++|+.+|......... .+.. ..+.. ..+.+
T Consensus 567 ~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~---------~~~~-----~~~~~-~~g~~-------- 623 (741)
T 1yr2_A 567 HGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQ---------FTAG-----RYWVD-DYGYP-------- 623 (741)
T ss_dssp TCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGG---------STTG-----GGGHH-HHCCT--------
T ss_pred HHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccC---------CCCC-----chhHH-HcCCC--------
Confidence 7899999999999999999999999999999988654321100 0000 00000 00000
Q ss_pred hhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhccc-CCc-cEEEEeeCCCCCCCcHHHH
Q 005190 275 AKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHA-VKA-QMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-PvLvi~G~~D~~v~~~~~~ 352 (709)
... ..+. .+. .......+.. +++ |+|+++|++|..+++.. +
T Consensus 624 -----~~~---~~~~--------------------------~~~--~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~-~ 666 (741)
T 1yr2_A 624 -----EKE---ADWR--------------------------VLR--RYSPYHNVRSGVDYPAILVTTADTDDRVVPGH-S 666 (741)
T ss_dssp -----TSH---HHHH--------------------------HHH--TTCGGGCCCTTSCCCEEEEEECSCCSSSCTHH-H
T ss_pred -----CCH---HHHH--------------------------HHH--HcCchhhhhccCCCCCEEEEeeCCCCCCChhH-H
Confidence 000 0000 000 0001123454 775 99999999999999986 7
Q ss_pred HHHHhhcCC-------cEEEEEcCCCccccccCh--hhHHHHHhh
Q 005190 353 ERLSSALHK-------CEPRNFYGHGHFLLLEDG--VDLVTIIKG 388 (709)
Q Consensus 353 ~~l~~~~~~-------~~~~~i~~aGH~~~le~p--~~~~~~I~~ 388 (709)
.++.+.+++ +++++++++||....+.. .++.+.+.+
T Consensus 667 ~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~ 711 (741)
T 1yr2_A 667 FKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQA 711 (741)
T ss_dssp HHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHH
Confidence 777765544 789999999999876433 355555553
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-13 Score=139.29 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=73.6
Q ss_pred CCCEEEEeCCCCCCcccHHHH---HHHh-cCCceEEEEeC--CCCCCC---------------------CH-------HH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ---HQRL-GKIFDIWCLHI--PVKDRT---------------------SF-------TG 176 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~---~~~L-~~~~~Vi~~Dl--~G~G~S---------------------s~-------~~ 176 (709)
..|+||++||.+++...|... ...+ ..+|.|+++|. ||+|.+ .+ ..
T Consensus 44 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 3fcx_A 44 KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSY 123 (282)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHH
Confidence 467999999999999888765 4555 47899999999 666542 11 12
Q ss_pred HHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 177 LVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 177 ~~~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
..+++...++. ..+ .++++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 124 ~~~~~~~~~~~---~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 124 VTEELPQLINA---NFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp HHTHHHHHHHH---HSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred HHHHHHHHHHH---HcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccC
Confidence 23344444442 232 36799999999999999999999999999999988654
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.5e-13 Score=137.55 Aligned_cols=99 Identities=18% Similarity=0.253 Sum_probs=75.4
Q ss_pred CCCEEEEeCCCCCCcccHHHH---HHHh-cCCceEEEEeCCCCCCC----------------------------C-HHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ---HQRL-GKIFDIWCLHIPVKDRT----------------------------S-FTGL 177 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~---~~~L-~~~~~Vi~~Dl~G~G~S----------------------------s-~~~~ 177 (709)
..|+||++||++++...|... ...+ ..++.|+++|.+++|.+ . .+.+
T Consensus 46 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 125 (280)
T 3i6y_A 46 KVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYV 125 (280)
T ss_dssp CEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHH
T ss_pred CccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHHHH
Confidence 578999999999998888764 2333 35899999999866542 0 2223
Q ss_pred HHHHHHHHHHhhccCCC-CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 178 VKLVESTVRSESNRSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~~~-~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
.+++..+++. .... .+++|+||||||.+|+.+|.++|+.++++|+++|....
T Consensus 126 ~~~~~~~~~~---~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~ 178 (280)
T 3i6y_A 126 VNELPELIES---MFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNP 178 (280)
T ss_dssp HTHHHHHHHH---HSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCG
T ss_pred HHHHHHHHHH---hCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCcccc
Confidence 4555555544 2332 68999999999999999999999999999999986553
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-13 Score=134.97 Aligned_cols=166 Identities=17% Similarity=0.188 Sum_probs=113.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc---CCceEEEEeCCCC--------------CCC--------------CHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIPVK--------------DRT--------------SFTGLVK 179 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~Dl~G~--------------G~S--------------s~~~~~~ 179 (709)
.+++|||+||+|++...|..+.+.|. .++.+++++-|-. ... .....++
T Consensus 36 ~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~ 115 (246)
T 4f21_A 36 ARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIA 115 (246)
T ss_dssp CCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHHH
Confidence 56689999999999999998888885 3578888875421 110 1234455
Q ss_pred HHHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHh
Q 005190 180 LVESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (709)
Q Consensus 180 dl~~~l~~~~~~-~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (709)
.+..+++..... .+.++++|+|+|+||++|+.++.++|+.+.++|.+++..+.....
T Consensus 116 ~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~---------------------- 173 (246)
T 4f21_A 116 KVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNF---------------------- 173 (246)
T ss_dssp HHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHH----------------------
T ss_pred HHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccc----------------------
Confidence 566666554332 345789999999999999999999999999999987743210000
Q ss_pred hhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEE
Q 005190 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVL 338 (709)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi 338 (709)
... ..-..-++|++++
T Consensus 174 -----------------------------~~~-----------------------------------~~~~~~~~Pvl~~ 189 (246)
T 4f21_A 174 -----------------------------KGK-----------------------------------ITSINKGLPILVC 189 (246)
T ss_dssp -----------------------------STT-----------------------------------CCGGGTTCCEEEE
T ss_pred -----------------------------ccc-----------------------------------ccccccCCchhhc
Confidence 000 0001235799999
Q ss_pred eeCCCCCCCcHHHHHHHHhhcC----CcEEEEEcCCCccccccChhhHH
Q 005190 339 CSGKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLV 383 (709)
Q Consensus 339 ~G~~D~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~p~~~~ 383 (709)
+|++|+++|.+. ++.+.+.+. +++++.+++.||.+..|.-+.+.
T Consensus 190 HG~~D~vVp~~~-~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~ 237 (246)
T 4f21_A 190 HGTDDQVLPEVL-GHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDIS 237 (246)
T ss_dssp EETTCSSSCHHH-HHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHH
T ss_pred ccCCCCccCHHH-HHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHH
Confidence 999999999986 666665433 57889999999988644333333
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-13 Score=144.69 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=77.8
Q ss_pred CCCCcccccccCC-CCCCCCCEEEEeCCCCCCcccHHHHH-----------H--HhcCCceEEEEeCCCCCCC--CH---
Q 005190 114 GGPPRWFSPLECG-SHTRDSPLLLFLPGIDGVGLGLIRQH-----------Q--RLGKIFDIWCLHIPVKDRT--SF--- 174 (709)
Q Consensus 114 g~~~~~~~~~~~g-~p~~~~p~Vv~lHG~~~s~~~~~~~~-----------~--~L~~~~~Vi~~Dl~G~G~S--s~--- 174 (709)
|.......|...+ .+....|+||++||.+++...+.... . ....++.|+++|.+|.+.. .+
T Consensus 155 g~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~~ 234 (380)
T 3doh_A 155 GVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDR 234 (380)
T ss_dssp CCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTCS
T ss_pred CcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCccccccccc
Confidence 3333333344443 22334679999999987654321110 0 1124578999999987543 11
Q ss_pred ------HHHHHHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 175 ------TGLVKLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 175 ------~~~~~dl~~~l~~~~~~~~~--~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
....+++.++++.+....+. .+++|+||||||.+|+.+|..+|+.++++|++++.
T Consensus 235 ~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 235 ENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp SCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred ccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 34555666666666555543 47999999999999999999999999999999885
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.46 E-value=5e-13 Score=138.38 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=82.0
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcccH-HHHHHHhc-CCceEEEEeCC------------CC--CCCCH--
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGL-IRQHQRLG-KIFDIWCLHIP------------VK--DRTSF-- 174 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~-~~~~~~L~-~~~~Vi~~Dl~------------G~--G~Ss~-- 174 (709)
++.......|...+. .+..|+||++||++++...| ..+.+.+. .+|.|+++|++ |+ |.|..
T Consensus 36 ~~~~l~~~~~~P~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~ 114 (304)
T 3d0k_A 36 ADRPFTLNTYRPYGY-TPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPR 114 (304)
T ss_dssp TTCCEEEEEEECTTC-CTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBC
T ss_pred CCceEEEEEEeCCCC-CCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCCC
Confidence 344444443444432 12578999999999999888 55677774 78999999999 66 66611
Q ss_pred ---HHHHHHHHHHHHHhhcc--CCCCCEEEEEechhHHHHHHHHHhCCC-ceeEEEEecC
Q 005190 175 ---TGLVKLVESTVRSESNR--SPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNP 228 (709)
Q Consensus 175 ---~~~~~dl~~~l~~~~~~--~~~~~v~LvGhS~GG~iAl~~A~~~P~-~v~~lVl~~p 228 (709)
....+++.++++.+... ....+++|+||||||.+++.+|..+|+ .++++|++++
T Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~ 174 (304)
T 3d0k_A 115 HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANP 174 (304)
T ss_dssp CGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESC
T ss_pred cccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecC
Confidence 12224455555555443 335789999999999999999999995 7899998875
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.46 E-value=3.8e-13 Score=145.01 Aligned_cols=100 Identities=13% Similarity=0.076 Sum_probs=66.2
Q ss_pred CCCEEEEeCCCCCCccc-----------HHHHHHHh-cCCceEEEEeCCCCCCCC-----H----------HHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLG-----------LIRQHQRL-GKIFDIWCLHIPVKDRTS-----F----------TGLVKLVES 183 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~-----------~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss-----~----------~~~~~dl~~ 183 (709)
+.|+||++||++++... |..++..| ++||.|+++|+||||.|+ + .++++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 46789999999987665 55677777 589999999999999882 1 122222233
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHHh-CC----C-ceeEEEEecCCCC
Q 005190 184 TVRSESNRSPKRPVYLVGESLGACIALAVAAR-NP----D-IDLVLILVNPATS 231 (709)
Q Consensus 184 ~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~-~P----~-~v~~lVl~~p~~~ 231 (709)
+++.+.. ....+++|+||||||.+++.+|.. .+ + .+.+++..++...
T Consensus 158 ~~~~~~~-~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 158 VLQHLKT-PLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHTC-CEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred HHHhcCC-CCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 3322110 012689999999999999888732 22 2 4666666655443
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=9.6e-13 Score=152.44 Aligned_cols=199 Identities=12% Similarity=0.028 Sum_probs=120.1
Q ss_pred CCCCEEEEeCCCCCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--C
Q 005190 130 RDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS--P 193 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~---------~~~~~dl~~~l~~~~~~~--~ 193 (709)
...|+||++||..+... .|......| .+||.|+++|+||+|.. .+ ....+|+.++++++.... .
T Consensus 452 ~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 531 (693)
T 3iuj_A 452 GSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTR 531 (693)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 35789999999766443 455555555 58999999999999876 11 223567777777665542 2
Q ss_pred CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
..++.++|||+||.+++.++.++|++++++|+..|......... .... ..+.. ..+++
T Consensus 532 ~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~---------~~~~-----~~~~~-~~g~p------- 589 (693)
T 3iuj_A 532 TDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT---------FTAG-----TGWAY-DYGTS------- 589 (693)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG---------SGGG-----GGCHH-HHCCT-------
T ss_pred cceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc---------CCCc-----hhHHH-HcCCc-------
Confidence 36899999999999999999999999999999888654321100 0000 00000 00000
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhccc-CCcc-EEEEeeCCCCCCCcHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHA-VKAQ-MLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-vLvi~G~~D~~v~~~~~ 351 (709)
... .. ++ ..+... .....+.. +++| +|+++|++|..+++..
T Consensus 590 ----~~~-~~---~~--------------------------~~~~~~--sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~- 632 (693)
T 3iuj_A 590 ----ADS-EA---MF--------------------------DYLKGY--SPLHNVRPGVSYPSTMVTTADHDDRVVPAH- 632 (693)
T ss_dssp ----TSC-HH---HH--------------------------HHHHHH--CHHHHCCTTCCCCEEEEEEESSCSSSCTHH-
T ss_pred ----cCH-HH---HH--------------------------HHHHhc--CHHHhhcccCCCCceeEEecCCCCCCChhH-
Confidence 000 00 00 000000 11134456 7887 9999999999999987
Q ss_pred HHHHHhhcC-------CcEEEEEcCCCccccc--cChhhHHHHHh
Q 005190 352 GERLSSALH-------KCEPRNFYGHGHFLLL--EDGVDLVTIIK 387 (709)
Q Consensus 352 ~~~l~~~~~-------~~~~~~i~~aGH~~~l--e~p~~~~~~I~ 387 (709)
+.++.+.++ .+++++++++||.... ++..+..+.+.
T Consensus 633 ~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~ 677 (693)
T 3iuj_A 633 SFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIY 677 (693)
T ss_dssp HHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHH
Confidence 776666443 3588999999999875 34444555555
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-12 Score=133.77 Aligned_cols=99 Identities=15% Similarity=0.233 Sum_probs=74.1
Q ss_pred CCCEEEEeCCCCCCcccHHH---HHHHh-cCCceEEEEeCCCCCCC----------------------------C-HHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIR---QHQRL-GKIFDIWCLHIPVKDRT----------------------------S-FTGL 177 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~---~~~~L-~~~~~Vi~~Dl~G~G~S----------------------------s-~~~~ 177 (709)
..|+||++||++++...|.. +...+ ..++.|+++|.+++|.+ . .+.+
T Consensus 44 ~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 123 (280)
T 3ls2_A 44 KVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYV 123 (280)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHH
T ss_pred CcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHHH
Confidence 46799999999999888765 33334 35899999998865533 0 2233
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+++...++..... ..+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 124 ~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 124 VNELPALIEQHFPV--TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HTHHHHHHHHHSSE--EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHhhCCC--CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 44555555542211 26899999999999999999999999999999998655
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.8e-13 Score=135.66 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=81.2
Q ss_pred CCCCEEEEeCCCCCCcccHHH--HHHHhc--CCceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhc-cC-CCCC
Q 005190 130 RDSPLLLFLPGIDGVGLGLIR--QHQRLG--KIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESN-RS-PKRP 196 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~--~~~~L~--~~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~-~~-~~~~ 196 (709)
.+.|+||++||++++...|.. ....+. .++.|+++|.++++.++ .+.+++++..+++.... .. ...+
T Consensus 39 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 118 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREK 118 (263)
T ss_dssp CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGG
T ss_pred CCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCc
Confidence 357899999999999999988 456663 57888899998887662 45666777777776433 11 2368
Q ss_pred EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 197 VYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
++|+|||+||.+|+.+|. +|+.++++|++++....
T Consensus 119 i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~ 153 (263)
T 2uz0_A 119 TFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSF 153 (263)
T ss_dssp EEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCS
T ss_pred eEEEEEChHHHHHHHHHh-CccccceEEEecCCcch
Confidence 999999999999999999 99999999999987654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-12 Score=146.58 Aligned_cols=187 Identities=15% Similarity=-0.014 Sum_probs=121.5
Q ss_pred CCCCEEEEeCCCCCCcc--cHHHHH-HHh-cCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHHhhccC--
Q 005190 130 RDSPLLLFLPGIDGVGL--GLIRQH-QRL-GKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSESNRS-- 192 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~--~~~~~~-~~L-~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~~~~~~-- 192 (709)
...|+||++||.++... .|.... +.| ++||.|+++|+||+|.+ ......+|+.++++++....
T Consensus 476 ~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~ 555 (711)
T 4hvt_A 476 GKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNIT 555 (711)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSC
T ss_pred CCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCC
Confidence 45889999999865543 233333 345 68999999999999876 11344567777777665543
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
...++.++|||+||.+++.++.++|++++++|+.+|......... .... ..+... .+.+
T Consensus 556 d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~---------~~~~-----~~~~~~-~G~p------ 614 (711)
T 4hvt_A 556 SPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKE---------FGAG-----HSWVTE-YGDP------ 614 (711)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG---------STTG-----GGGHHH-HCCT------
T ss_pred CcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhc---------cccc-----hHHHHH-hCCC------
Confidence 236899999999999999999999999999999888655321100 0000 000000 0000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCc--cEEEEeeCCCCCCCcHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKA--QMLVLCSGKDQLMPSQE 350 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--PvLvi~G~~D~~v~~~~ 350 (709)
... ... ..+.. ......+.++++ |+|+++|++|..+++..
T Consensus 615 -------~~~---~~~--------------------------~~l~~--~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~ 656 (711)
T 4hvt_A 615 -------EIP---NDL--------------------------LHIKK--YAPLENLSLTQKYPTVLITDSVLDQRVHPWH 656 (711)
T ss_dssp -------TSH---HHH--------------------------HHHHH--HCGGGSCCTTSCCCEEEEEEETTCCSSCTHH
T ss_pred -------cCH---HHH--------------------------HHHHH--cCHHHHHhhcCCCCCEEEEecCCCCcCChHH
Confidence 000 000 00000 011234566777 99999999999999997
Q ss_pred HHHHHHhhc-----CCcEEEEEcCCCccccc
Q 005190 351 EGERLSSAL-----HKCEPRNFYGHGHFLLL 376 (709)
Q Consensus 351 ~~~~l~~~~-----~~~~~~~i~~aGH~~~l 376 (709)
+.++.+.+ ..+++++++++||....
T Consensus 657 -s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~ 686 (711)
T 4hvt_A 657 -GRIFEYVLAQNPNTKTYFLESKDSGHGSGS 686 (711)
T ss_dssp -HHHHHHHHTTCTTCCEEEEEESSCCSSSCS
T ss_pred -HHHHHHHHHHHcCCCEEEEEECCCCCcCcC
Confidence 77777766 35789999999999754
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.7e-13 Score=154.89 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=78.8
Q ss_pred CCCCEEEEeCCCCCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCC--CH----------HHHHHHHHHHHHHhhcc--C
Q 005190 130 RDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF----------TGLVKLVESTVRSESNR--S 192 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~----------~~~~~dl~~~l~~~~~~--~ 192 (709)
...|+||++||.+++.. .|......| .+||.|+++|+||+|.+ .+ ....+|+.+.++++... .
T Consensus 507 ~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 586 (751)
T 2xe4_A 507 QPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLT 586 (751)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSC
T ss_pred CCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCC
Confidence 35789999999876654 455555556 57999999999999875 11 13456666666666554 2
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
...++.++|+|+||.+++.+|.++|++++++|+.+|...
T Consensus 587 d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d 625 (751)
T 2xe4_A 587 TPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVD 625 (751)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred CcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcch
Confidence 346899999999999999999999999999999988543
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-13 Score=146.14 Aligned_cols=101 Identities=17% Similarity=0.197 Sum_probs=82.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCc---eEEEEeCCCCCCC----------------------------------
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIF---DIWCLHIPVKDRT---------------------------------- 172 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~---~Vi~~Dl~G~G~S---------------------------------- 172 (709)
++++|||+||++++...|..+++.|. +|| +|+++|++|||.|
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~ 100 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILS 100 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccccc
Confidence 46789999999999999999999995 678 7999999999954
Q ss_pred -----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCCC
Q 005190 173 -----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPATS 231 (709)
Q Consensus 173 -----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P---~~v~~lVl~~p~~~ 231 (709)
+.....+++.+.++.+....+.++++|+||||||.+++.+|.++| +.++++|++++...
T Consensus 101 ~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 101 KSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 123344555555555555566689999999999999999999998 48999999998543
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.4e-13 Score=147.89 Aligned_cols=101 Identities=12% Similarity=0.057 Sum_probs=86.6
Q ss_pred CCCEEEEeCCCCCCc-ccHHH-HHHHhcC--CceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhccC--CCCCE
Q 005190 131 DSPLLLFLPGIDGVG-LGLIR-QHQRLGK--IFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRS--PKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~-~~~~L~~--~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~~--~~~~v 197 (709)
++|+||++||++++. ..|.. +++.|.+ +|+|+++|++|||.|. ++++++|+.++++.+.... +.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i 148 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPENV 148 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 477999999999998 78887 7788853 8999999999999983 4567788899998875432 36789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+|+||||||.+|+.+|.++|+++.++|+++|+.+
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 149 HIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 9999999999999999999999999999998654
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.9e-13 Score=147.15 Aligned_cols=101 Identities=19% Similarity=0.166 Sum_probs=86.4
Q ss_pred CCCEEEEeCCCCCCc-ccHHH-HHHHhc--CCceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhccC--CCCCE
Q 005190 131 DSPLLLFLPGIDGVG-LGLIR-QHQRLG--KIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRS--PKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~-~~~~L~--~~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~~--~~~~v 197 (709)
++|+||++||++++. ..|.. +.+.|. .+|+|+++|++|||.|+ +.++++|+.++++++.... +.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~i 148 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccce
Confidence 477899999999998 78988 667774 38999999999999993 3567788999998875432 24789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+|+||||||.+|+.+|.++|+++.++|+++|+.+
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 9999999999999999999999999999998654
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-12 Score=131.03 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=73.9
Q ss_pred CCCEEEEeCCCCCCcccHHH-------HHHHhc-C----CceEEEEeCCCCCCC---CHHHHHHH-HHHHHHHhhccCC-
Q 005190 131 DSPLLLFLPGIDGVGLGLIR-------QHQRLG-K----IFDIWCLHIPVKDRT---SFTGLVKL-VESTVRSESNRSP- 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~-------~~~~L~-~----~~~Vi~~Dl~G~G~S---s~~~~~~d-l~~~l~~~~~~~~- 193 (709)
..|+||++||.+++...|.. +++.|. + ++.|+++|.++++.+ .+.++.++ +.++++.+.....
T Consensus 61 ~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 140 (268)
T 1jjf_A 61 KYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYSV 140 (268)
T ss_dssp CBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCB
T ss_pred CccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhcCC
Confidence 57899999999988766543 366663 3 599999999998765 23333232 3344444333332
Q ss_pred ---CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 194 ---KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 194 ---~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
..+++|+||||||.+|+.+|.++|+.+++++++++..
T Consensus 141 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 141 YTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp CCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 3689999999999999999999999999999998854
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.37 E-value=8.6e-13 Score=142.63 Aligned_cols=101 Identities=17% Similarity=0.161 Sum_probs=84.6
Q ss_pred CCCEEEEeCCCCCCc-ccHHH-HHHHh--cCCceEEEEeCCCCCCCCH-------HHHHHHHHHHHHHhhcc--CCCCCE
Q 005190 131 DSPLLLFLPGIDGVG-LGLIR-QHQRL--GKIFDIWCLHIPVKDRTSF-------TGLVKLVESTVRSESNR--SPKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~-~~~~L--~~~~~Vi~~Dl~G~G~Ss~-------~~~~~dl~~~l~~~~~~--~~~~~v 197 (709)
++|+||++||++++. ..|.. +++.| ..+|+|+++|++|||.|.. ..+++++.++++.+... .+.+++
T Consensus 68 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~v 147 (449)
T 1hpl_A 68 GRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSNV 147 (449)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 467899999999986 57876 66777 4689999999999999843 45677888888887432 245789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+|+||||||.+|..+|..+|+++.++++++|+.+
T Consensus 148 ~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 148 HIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 9999999999999999999999999999998654
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.3e-12 Score=129.72 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=74.1
Q ss_pred CCCEEEEeCCCCCCcccHHH---HHHHh-cCCceEEEEeCC--------------CCCCC--------------C-HHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIR---QHQRL-GKIFDIWCLHIP--------------VKDRT--------------S-FTGL 177 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~---~~~~L-~~~~~Vi~~Dl~--------------G~G~S--------------s-~~~~ 177 (709)
..|+||++||.+++...|.. +...+ ..++.|+++|.+ |+|.+ . ...+
T Consensus 50 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 129 (283)
T 4b6g_A 50 PLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYI 129 (283)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHHHH
Confidence 46799999999999887754 23333 368999999986 44444 1 2333
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 178 ~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+++..+++.... ...+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 130 ~~~~~~~i~~~~~--~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 130 LNELPRLIEKHFP--TNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HTHHHHHHHHHSC--EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHhCC--CCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 4566666665321 136899999999999999999999999999999998655
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.8e-11 Score=140.15 Aligned_cols=214 Identities=11% Similarity=0.062 Sum_probs=120.6
Q ss_pred HHHh-cCCceEEEEeCCCCCCCC------HHHHHHHHHHHHHHhhcc----------------CCCCCEEEEEechhHHH
Q 005190 152 HQRL-GKIFDIWCLHIPVKDRTS------FTGLVKLVESTVRSESNR----------------SPKRPVYLVGESLGACI 208 (709)
Q Consensus 152 ~~~L-~~~~~Vi~~Dl~G~G~Ss------~~~~~~dl~~~l~~~~~~----------------~~~~~v~LvGhS~GG~i 208 (709)
...| ++||.|+++|.||+|.|+ ..+.++|+.++++++... ....+|.++||||||.+
T Consensus 274 ~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~i 353 (763)
T 1lns_A 274 NDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTM 353 (763)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHH
T ss_pred HHHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHH
Confidence 3555 689999999999999992 136788999999997632 11358999999999999
Q ss_pred HHHHHHhCCCceeEEEEecCCCCcchhhhhhhh--HHHhhchhh-hHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHH
Q 005190 209 ALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--PLLELIPGQ-ITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQ 285 (709)
Q Consensus 209 Al~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (709)
++.+|+.+|+.++++|..++...... ...... ......+.. ........+....... ..... .....
T Consensus 354 al~~Aa~~p~~lkaiV~~~~~~d~~~-~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g---~~~~~------~~~~~ 423 (763)
T 1lns_A 354 AYGAATTGVEGLELILAEAGISSWYN-YYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGA---DFLKG------NAEYE 423 (763)
T ss_dssp HHHHHTTTCTTEEEEEEESCCSBHHH-HHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHH---HHHHH------HHHHH
T ss_pred HHHHHHhCCcccEEEEEecccccHHH-HhhhcchhhhcccCCchhhhHHhHHHHhhhcCcc---hhhhH------HHHHH
Confidence 99999999999999999988643211 000000 000000000 0000000000000000 00000 00000
Q ss_pred HHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC--cE
Q 005190 286 DLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK--CE 363 (709)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~--~~ 363 (709)
........ ......+... ..+. .......+.+|++|+|+++|.+|..+++.. +..+.+.+++ ..
T Consensus 424 ~~~~~~~~------~~~~~~~~~~-----~~w~--~~s~~~~l~~I~~PvLii~G~~D~~vp~~~-a~~l~~al~~~~~~ 489 (763)
T 1lns_A 424 KRLAEMTA------ALDRKSGDYN-----QFWH--DRNYLINTDKVKADVLIVHGLQDWNVTPEQ-AYNFWKALPEGHAK 489 (763)
T ss_dssp HHHHHHHH------HHCTTTCCCC-----HHHH--TTBGGGGGGGCCSEEEEEEETTCCSSCTHH-HHHHHHHSCTTCCE
T ss_pred HHHHHHHh------hhhhccCchh-----HHhh--ccChhhHhhcCCCCEEEEEECCCCCCChHH-HHHHHHhhccCCCe
Confidence 00000000 0000000000 0000 011235678899999999999999999997 8888888764 34
Q ss_pred EEEEcCCCcccccc-ChhhHHHHHhhc
Q 005190 364 PRNFYGHGHFLLLE-DGVDLVTIIKGA 389 (709)
Q Consensus 364 ~~~i~~aGH~~~le-~p~~~~~~I~~~ 389 (709)
..++.++||..+.+ .+.++.+.+.+|
T Consensus 490 ~l~i~~~gH~~~~~~~~~~~~~~i~~F 516 (763)
T 1lns_A 490 HAFLHRGAHIYMNSWQSIDFSETINAY 516 (763)
T ss_dssp EEEEESCSSCCCTTBSSCCHHHHHHHH
T ss_pred EEEEeCCcccCccccchHHHHHHHHHH
Confidence 45567889998765 556677777755
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.35 E-value=8.2e-13 Score=143.22 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=86.8
Q ss_pred CCCEEEEeCCCCCCc-ccHHH-HHHHhc--CCceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhccC--CCCCE
Q 005190 131 DSPLLLFLPGIDGVG-LGLIR-QHQRLG--KIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRS--PKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-~~~~~-~~~~L~--~~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~~--~~~~v 197 (709)
++|+||++||++++. ..|.. +.+.|. .+|+|+++|++|+|.|+ ++++++|+.++++++.... +.+++
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i 148 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPENV 148 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 467899999999998 68887 778885 59999999999999983 4567788999998876433 36789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+|+||||||.+|+.+|.++|+++.++++++|+.+
T Consensus 149 ~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 149 HIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp EEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred EEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 9999999999999999999999999999998654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=132.98 Aligned_cols=96 Identities=20% Similarity=0.159 Sum_probs=84.6
Q ss_pred CCCEEEEeCCCCCCcc-----cHHHHHHHhc-CCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 131 DSPLLLFLPGIDGVGL-----GLIRQHQRLG-KIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~-----~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
.+|+|||+||++++.. .|..+.+.|. +||+|+++|+||+|.+ +.+++++++.++++.+ +.++++|+||
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~~~~~~~~~i~~~~~~~----~~~~v~lvGh 81 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALS----GQPKVNLIGH 81 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHHH----CCSCEEEEEE
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchhhHHHHHHHHHHHHHHh----CCCCEEEEEE
Confidence 4678999999998854 8889999995 6799999999999998 6788888988888773 4568999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
||||.++..++..+|+.|+++|+++++.
T Consensus 82 S~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 82 SHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999843
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-12 Score=134.46 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=84.3
Q ss_pred CCCEEEEeCCCCCCc------ccHHHHHHHhc-CCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 131 DSPLLLFLPGIDGVG------LGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~------~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
++++|||+||++++. ..|..+.+.|. ++|+|+++|++|+|.| +.+++++++.++++. .+.++++
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~~~~~~l~~~i~~~l~~----~~~~~v~ 82 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAA----TGATKVN 82 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTTSHHHHHHHHHHHHHHH----HCCSCEE
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCCEE
Confidence 467899999999988 78999999995 6899999999999988 457788888888776 3457899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
|+||||||.++..+|..+|+.|+++|+++++.
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 99999999999999999999999999999844
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.32 E-value=2.8e-12 Score=138.64 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=83.4
Q ss_pred CCCEEEEeCCCCCCcc-cHHH-HHHHh-c-CCceEEEEeCCCCCCCC-------HHHHHHHHHHHHHHhhcc--CCCCCE
Q 005190 131 DSPLLLFLPGIDGVGL-GLIR-QHQRL-G-KIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNR--SPKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~-~~~~-~~~~L-~-~~~~Vi~~Dl~G~G~Ss-------~~~~~~dl~~~l~~~~~~--~~~~~v 197 (709)
++|+||++||++++.. .|.. +.+.| + .+|+|+++|++|+|.|. .+.+++++.++++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v 148 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (450)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhhE
Confidence 4788999999998875 7876 56666 3 47999999999999884 355778888888887432 245789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+|+||||||.+|..+|..+|+ +.++++++|+.+.
T Consensus 149 ~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p~ 182 (450)
T 1rp1_A 149 QLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEAS 182 (450)
T ss_dssp EEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCTT
T ss_pred EEEEECHhHHHHHHHHHhcCC-cccccccCccccc
Confidence 999999999999999999999 9999999986653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-10 Score=118.13 Aligned_cols=95 Identities=20% Similarity=0.295 Sum_probs=76.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
++++|+|+||++++...|..+...|. +.|+++|+|+.... +++++++++.+.++.+ .+..+++++||||||.+|
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l~--~~v~~~~~~~~~~~~~~~~~a~~~~~~i~~~---~~~~~~~l~G~S~Gg~va 119 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQV---QPEGPYRVAGYSYGACVA 119 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCTTCHHHHHHHHHHHHTTT---CSSCCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--CCEEEEECCCCCCcCCHHHHHHHHHHHHHHh---CCCCCEEEEEECHHHHHH
Confidence 36679999999999999999999996 99999999953222 7888888887777652 224689999999999999
Q ss_pred HHHHHhCC---Cc---eeEEEEecCCC
Q 005190 210 LAVAARNP---DI---DLVLILVNPAT 230 (709)
Q Consensus 210 l~~A~~~P---~~---v~~lVl~~p~~ 230 (709)
..+|.+.+ +. +.+++++++..
T Consensus 120 ~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 120 FEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHcCCcccccceEEEEcCCc
Confidence 99998763 45 88999988753
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.4e-11 Score=126.19 Aligned_cols=102 Identities=10% Similarity=-0.020 Sum_probs=67.2
Q ss_pred CCCEEEEeCCCCCCcc---------cHHHHHHHh-cCCceEEEEeCCCCCCCC-----H---HHHHHHHHHHHHHhh---
Q 005190 131 DSPLLLFLPGIDGVGL---------GLIRQHQRL-GKIFDIWCLHIPVKDRTS-----F---TGLVKLVESTVRSES--- 189 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~---------~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss-----~---~~~~~dl~~~l~~~~--- 189 (709)
..|+|++.||..+... .+....... ++||.|+++|++|+|.|+ + .....++.+.++.+.
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~ 152 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELA 152 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHh
Confidence 4678999999975322 122222233 689999999999999873 1 222233333332221
Q ss_pred ccC---CCCCEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCCc
Q 005190 190 NRS---PKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSF 232 (709)
Q Consensus 190 ~~~---~~~~v~LvGhS~GG~iAl~~A~~~P~-----~v~~lVl~~p~~~~ 232 (709)
... ...+++++||||||.+++.+|..+|+ .+.+.+..+++...
T Consensus 153 ~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl 203 (377)
T 4ezi_A 153 NRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGW 203 (377)
T ss_dssp HHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCH
T ss_pred hccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCH
Confidence 112 23789999999999999999987653 47788888776553
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.26 E-value=4.3e-12 Score=132.30 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=82.6
Q ss_pred CCCEEEEeCCCCC----------CcccH----HHHHHHhc-CCce---EEEEeCCCCCCC-------CHHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDG----------VGLGL----IRQHQRLG-KIFD---IWCLHIPVKDRT-------SFTGLVKLVESTV 185 (709)
Q Consensus 131 ~~p~Vv~lHG~~~----------s~~~~----~~~~~~L~-~~~~---Vi~~Dl~G~G~S-------s~~~~~~dl~~~l 185 (709)
++++|||+||+++ +...| ..+++.|. ++|. |+++|++|+|.| +.+...+++.+.+
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 4567999999999 45678 88889885 5887 999999999976 2345566666666
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~ 231 (709)
+.+....+.++++||||||||.++..++.++ |++|+++|+++++..
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 6665556668999999999999999999998 999999999998654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.25 E-value=6.8e-12 Score=112.32 Aligned_cols=85 Identities=15% Similarity=0.156 Sum_probs=70.4
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCC-----HHHHHHHHHHHHHHhhccCCC
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS-----FTGLVKLVESTVRSESNRSPK 194 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss-----~~~~~~dl~~~l~~~~~~~~~ 194 (709)
++|...|+ +|+|||+| ++...|..+ |+++|+|+++|+||||.|+ ++++++++.++++. .+.
T Consensus 14 ~~~~~~g~----~~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~----~~~ 79 (131)
T 2dst_A 14 LVFDRVGK----GPPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVM----MNL 79 (131)
T ss_dssp EEEEEECC----SSEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHH----TTC
T ss_pred EEEEEcCC----CCeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH----cCC
Confidence 34555554 67899999 556667666 8777999999999999993 78889999999887 445
Q ss_pred CCEEEEEechhHHHHHHHHHhCCC
Q 005190 195 RPVYLVGESLGACIALAVAARNPD 218 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~ 218 (709)
++++++||||||.+|+.+|.++|.
T Consensus 80 ~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 80 GAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CccEEEEEChHHHHHHHHHhcCCc
Confidence 689999999999999999999985
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=7.3e-11 Score=127.16 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=78.1
Q ss_pred EEEEeCCCCCCcccHH---HHHHHhcC--CceEEEEeCCCCCCCC-----------------HHHHHHHHHHHHHHhhcc
Q 005190 134 LLLFLPGIDGVGLGLI---RQHQRLGK--IFDIWCLHIPVKDRTS-----------------FTGLVKLVESTVRSESNR 191 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~~~---~~~~~L~~--~~~Vi~~Dl~G~G~Ss-----------------~~~~~~dl~~~l~~~~~~ 191 (709)
+|||+||..++...+. .....+++ ++.|+++|+||||.|. .+++++|+..++++++..
T Consensus 40 Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~ 119 (446)
T 3n2z_B 40 SILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRT 119 (446)
T ss_dssp EEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHh
Confidence 4888899888765432 13334432 5799999999999991 467899999999998875
Q ss_pred C---CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 192 S---PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 192 ~---~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
. +..+++++||||||++|+.++.++|+.|.++|+.+++.
T Consensus 120 ~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 120 IPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp STTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred cccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 4 45689999999999999999999999999999987543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.9e-10 Score=128.27 Aligned_cols=99 Identities=10% Similarity=-0.070 Sum_probs=80.2
Q ss_pred CCCEEEEeCCCCCCcccHHHH---H-HHh-cCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccC-CCCCEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ---H-QRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRS-PKRPVYL 199 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~---~-~~L-~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~-~~~~v~L 199 (709)
..|+||+.||++.....+..+ . ..| ++||.|+++|.||+|.| .+.+..+|+.++++++..+. ...++.+
T Consensus 34 ~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~~~~~~D~~~~i~~l~~~~~~~~~v~l 113 (587)
T 3i2k_A 34 PVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCDGNVGM 113 (587)
T ss_dssp CEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEEEEEEE
T ss_pred CeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccccchhHHHHHHHHHHHhCCCCCCeEEE
Confidence 367899999988875433322 2 555 58999999999999999 34567888889988876532 2368999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
+||||||.+++.+|+.+|+.++++|++++.
T Consensus 114 ~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 114 FGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp CEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred EeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 999999999999999999999999999886
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-09 Score=110.95 Aligned_cols=101 Identities=14% Similarity=0.075 Sum_probs=74.6
Q ss_pred CCCEEEEeCCC--CCCcccHHHH---HHHhc-CCceEEEEeCCCCC-CC---------------CHHHH-HHHHHHHHHH
Q 005190 131 DSPLLLFLPGI--DGVGLGLIRQ---HQRLG-KIFDIWCLHIPVKD-RT---------------SFTGL-VKLVESTVRS 187 (709)
Q Consensus 131 ~~p~Vv~lHG~--~~s~~~~~~~---~~~L~-~~~~Vi~~Dl~G~G-~S---------------s~~~~-~~dl~~~l~~ 187 (709)
..|+||++||. +++...|... .+.+. .++.|+++|.++.. .+ .++++ ++++..+++.
T Consensus 33 ~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~ 112 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (304)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHH
Confidence 57899999999 5677778764 34454 57999999987641 11 33444 3566666665
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
... ...++++|+||||||.+|+.+|.++|+.++++|++++....
T Consensus 113 ~~~-~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 156 (304)
T 1sfr_A 113 NRH-VKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (304)
T ss_dssp HHC-BCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred HCC-CCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 222 12348999999999999999999999999999999886543
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.05 E-value=9.3e-10 Score=124.94 Aligned_cols=101 Identities=11% Similarity=0.025 Sum_probs=80.1
Q ss_pred CCCEEEEeCCCCCCc-------ccHHH-HH---HHh-cCCceEEEEeCCCCCCC-----CH-------H----HHHHHHH
Q 005190 131 DSPLLLFLPGIDGVG-------LGLIR-QH---QRL-GKIFDIWCLHIPVKDRT-----SF-------T----GLVKLVE 182 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-------~~~~~-~~---~~L-~~~~~Vi~~Dl~G~G~S-----s~-------~----~~~~dl~ 182 (709)
..|+||++||++.+. ..|.. +. +.| ++||.|+++|.||+|.| .. . ...+|+.
T Consensus 50 ~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~ 129 (615)
T 1mpx_A 50 NAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAW 129 (615)
T ss_dssp SEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHH
T ss_pred CeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCccccccccccccccccccHHHHHH
Confidence 357899999988753 13332 22 556 58999999999999998 11 2 6788999
Q ss_pred HHHHHhhcc--CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 183 STVRSESNR--SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 183 ~~l~~~~~~--~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
++++++..+ ....++.++||||||.+++.+|..+|+.++++|.+++...
T Consensus 130 ~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 130 DTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp HHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred HHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 999988765 2235899999999999999999999999999999988766
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.4e-09 Score=108.14 Aligned_cols=101 Identities=10% Similarity=-0.020 Sum_probs=72.5
Q ss_pred CCCEEEEeCCCCCCcccH-------HHHHHHh-cC----CceEEEEeCCCCCCC--CH-HHHHHHHHHHHHHhhccC---
Q 005190 131 DSPLLLFLPGIDGVGLGL-------IRQHQRL-GK----IFDIWCLHIPVKDRT--SF-TGLVKLVESTVRSESNRS--- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~-------~~~~~~L-~~----~~~Vi~~Dl~G~G~S--s~-~~~~~dl~~~l~~~~~~~--- 192 (709)
..|+||++||.+++...| ..++..| ++ ++.|+++|.+|-... .+ +.+.+++...++......
T Consensus 68 ~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 147 (297)
T 1gkl_A 68 KYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAES 147 (297)
T ss_dssp CCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHHHHHSCSSCSS
T ss_pred CCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHHHHHHHHHHHHHHHHHhCCccccc
Confidence 467899999998766544 3456666 33 589999998763211 33 334566666666532221
Q ss_pred --------CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 193 --------PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 193 --------~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
...++.|+|+||||.+|+.+|.++|+.+++++++++...
T Consensus 148 ~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 148 TTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 194 (297)
T ss_dssp CSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred cccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccc
Confidence 224699999999999999999999999999999988654
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-09 Score=108.20 Aligned_cols=99 Identities=12% Similarity=-0.004 Sum_probs=73.3
Q ss_pred CEEEEeCCCC--CCcccHHHHH---HHhc-CCceEEEEeCCCCC-CC---------------CHHHH-HHHHHHHHHHhh
Q 005190 133 PLLLFLPGID--GVGLGLIRQH---QRLG-KIFDIWCLHIPVKD-RT---------------SFTGL-VKLVESTVRSES 189 (709)
Q Consensus 133 p~Vv~lHG~~--~s~~~~~~~~---~~L~-~~~~Vi~~Dl~G~G-~S---------------s~~~~-~~dl~~~l~~~~ 189 (709)
++||++||++ ++...|.... +.+. .++.|+++|.+|.+ .+ +++++ ++++..+++...
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~ 109 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANK 109 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHc
Confidence 5899999995 4777887643 4454 57999999987542 11 23443 467777776521
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
. ...++++|+||||||.+|+.+|.++|+.++++|++++....
T Consensus 110 ~-~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 110 G-VSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp C-CCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred C-CCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 1 12248999999999999999999999999999999886653
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6.2e-09 Score=112.12 Aligned_cols=102 Identities=14% Similarity=-0.037 Sum_probs=67.9
Q ss_pred CCCEEEEeCCCCCCccc--------------------HH--HHHHH-hcCCceEEEEeCCCCCCC--CHHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLG--------------------LI--RQHQR-LGKIFDIWCLHIPVKDRT--SFTGLVKLVESTV 185 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~--------------------~~--~~~~~-L~~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l 185 (709)
+.|+|.+-||..+.... +. .+... +++||.|+++|++|+|.+ .-..-..++.+.+
T Consensus 105 ~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~~~~~~~~vlD~v 184 (462)
T 3guu_A 105 PPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGI 184 (462)
T ss_dssp SCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccCCcchhHHHHHHH
Confidence 47899999998764321 12 13344 679999999999999987 1111122333333
Q ss_pred HHhhcc---CCCCCEEEEEechhHHHHHHHHHhC----CC-ceeEEEEecCCCCc
Q 005190 186 RSESNR---SPKRPVYLVGESLGACIALAVAARN----PD-IDLVLILVNPATSF 232 (709)
Q Consensus 186 ~~~~~~---~~~~~v~LvGhS~GG~iAl~~A~~~----P~-~v~~lVl~~p~~~~ 232 (709)
+..+.. ....++.++|||+||..++.+|... |+ .+.+.+..+++...
T Consensus 185 rAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl 239 (462)
T 3guu_A 185 RALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSA 239 (462)
T ss_dssp HHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBH
T ss_pred HHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCH
Confidence 332222 1247899999999999998887754 44 47888888876543
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.3e-09 Score=108.16 Aligned_cols=100 Identities=14% Similarity=-0.001 Sum_probs=73.3
Q ss_pred CCEEEEeCCCC--CCcccHHH---HHHHhc-CCceEEEEeCCCCC-CC--------CHHH-HHHHHHHHHHHhhccCCCC
Q 005190 132 SPLLLFLPGID--GVGLGLIR---QHQRLG-KIFDIWCLHIPVKD-RT--------SFTG-LVKLVESTVRSESNRSPKR 195 (709)
Q Consensus 132 ~p~Vv~lHG~~--~s~~~~~~---~~~~L~-~~~~Vi~~Dl~G~G-~S--------s~~~-~~~dl~~~l~~~~~~~~~~ 195 (709)
.|+||++||++ ++...|.. +.+.+. .++.|+++|..+.+ .+ .+++ +++++..+++.... ...+
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-~~~~ 112 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRG-LAPG 112 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSC-CCSS
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHHCC-CCCC
Confidence 37999999995 46667765 445564 67999999997642 11 2323 44566666665211 1235
Q ss_pred CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+++|+||||||.+|+.+|.++|+.+++++++++....
T Consensus 113 ~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 149 (280)
T 1r88_A 113 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 149 (280)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred ceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 8999999999999999999999999999999886553
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.4e-10 Score=117.43 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=71.1
Q ss_pred CCCEEEEeCCCCCCcc-------cHHH----HHHHhc-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHh----------
Q 005190 131 DSPLLLFLPGIDGVGL-------GLIR----QHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSE---------- 188 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~-------~~~~----~~~~L~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~---------- 188 (709)
++++|||+||++++.. .|.. +.+.|+ ++|+|+++|++|||.|. +.+.++...++..
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~--~~a~~l~~~i~~~~vDy~~~~a~ 82 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNW--DRACEAYAQLVGGTVDYGAAHAA 82 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHH--HHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcc--ccHHHHHHHHHhhhhhhhhhhhh
Confidence 4567999999988753 3653 448884 78999999999999762 2223333333310
Q ss_pred ---------------hccCCCCCEEEEEechhHHHHHHHHHh-------------------CC------CceeEEEEecC
Q 005190 189 ---------------SNRSPKRPVYLVGESLGACIALAVAAR-------------------NP------DIDLVLILVNP 228 (709)
Q Consensus 189 ---------------~~~~~~~~v~LvGhS~GG~iAl~~A~~-------------------~P------~~v~~lVl~~p 228 (709)
....+.++++||||||||.++..+|.. +| ++|.++|++++
T Consensus 83 ~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~t 162 (387)
T 2dsn_A 83 KHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIAT 162 (387)
T ss_dssp HHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECC
Confidence 011346799999999999999999972 36 78999999987
Q ss_pred CCC
Q 005190 229 ATS 231 (709)
Q Consensus 229 ~~~ 231 (709)
+..
T Consensus 163 P~~ 165 (387)
T 2dsn_A 163 PHD 165 (387)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-09 Score=116.50 Aligned_cols=96 Identities=11% Similarity=0.174 Sum_probs=70.5
Q ss_pred CCCEEEEeCCCCCC--------cccHH----HHHHHh-cCCceEEEEeCCCCCCCCH--HHHHHHH--------------
Q 005190 131 DSPLLLFLPGIDGV--------GLGLI----RQHQRL-GKIFDIWCLHIPVKDRTSF--TGLVKLV-------------- 181 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s--------~~~~~----~~~~~L-~~~~~Vi~~Dl~G~G~Ss~--~~~~~dl-------------- 181 (709)
.+++|||+||++++ ...|. .+.+.| .++|+|+++|++|||.|.. .++...+
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 36679999999875 34564 488888 4789999999999998731 1221111
Q ss_pred ----------HHHHHHhhccCC-CCCEEEEEechhHHHHHHHHHh--------------------------CCCceeEEE
Q 005190 182 ----------ESTVRSESNRSP-KRPVYLVGESLGACIALAVAAR--------------------------NPDIDLVLI 224 (709)
Q Consensus 182 ----------~~~l~~~~~~~~-~~~v~LvGhS~GG~iAl~~A~~--------------------------~P~~v~~lV 224 (709)
.+++++ .. ..+++||||||||.+|..+|.. +|+.|.++|
T Consensus 131 ~~~~~~a~dl~~ll~~----l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv 206 (431)
T 2hih_A 131 YGHERYGKTYEGVLKD----WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSIT 206 (431)
T ss_dssp HTCCSEEEEECCSCTT----CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEE
T ss_pred CCHHHHHHHHHHHHHH----hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEE
Confidence 111111 22 3689999999999999999876 789999999
Q ss_pred EecCCC
Q 005190 225 LVNPAT 230 (709)
Q Consensus 225 l~~p~~ 230 (709)
+++++.
T Consensus 207 ~i~tP~ 212 (431)
T 2hih_A 207 TIATPH 212 (431)
T ss_dssp EESCCT
T ss_pred EECCCC
Confidence 998854
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=6.9e-09 Score=115.54 Aligned_cols=118 Identities=11% Similarity=-0.024 Sum_probs=87.1
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcc-cHH----------------------HHHHHh-cCCceEEEEeCCC
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL-GLI----------------------RQHQRL-GKIFDIWCLHIPV 168 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~-~~~----------------------~~~~~L-~~~~~Vi~~Dl~G 168 (709)
||.......|...+. ...|+||+.||++.+.. .+. .....| ++||.|+++|.||
T Consensus 50 DG~~L~a~l~~P~~~--~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~RG 127 (560)
T 3iii_A 50 DGEKLYINIFRPNKD--GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRG 127 (560)
T ss_dssp TSCEEEEEEEECSSS--SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECTT
T ss_pred CCcEEEEEEEecCCC--CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCCC
Confidence 554443334444332 24678999999988742 111 124566 5899999999999
Q ss_pred CCCC-----CH-HHHHHHHHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 169 KDRT-----SF-TGLVKLVESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 169 ~G~S-----s~-~~~~~dl~~~l~~~~~~~-~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+|.| .+ ....+|+.++++.+..+- ...++.++|||+||.+++.+|+.+|+.++++|..++....
T Consensus 128 ~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d~ 198 (560)
T 3iii_A 128 SDKSKGVLSPWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDM 198 (560)
T ss_dssp STTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCBH
T ss_pred CCCCCCccccCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence 9999 23 367888999998876542 1368999999999999999999999999999999886553
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=98.86 E-value=5.2e-09 Score=119.30 Aligned_cols=102 Identities=14% Similarity=-0.004 Sum_probs=78.8
Q ss_pred CCCEEEEeCCCCCCc--------ccHHHH---H-HHh-cCCceEEEEeCCCCCCC-----CH-------H----HHHHHH
Q 005190 131 DSPLLLFLPGIDGVG--------LGLIRQ---H-QRL-GKIFDIWCLHIPVKDRT-----SF-------T----GLVKLV 181 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~--------~~~~~~---~-~~L-~~~~~Vi~~Dl~G~G~S-----s~-------~----~~~~dl 181 (709)
..|+||++||++... ..|... . ..| ++||.|+.+|.||+|.| .. . ...+|+
T Consensus 62 ~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~ 141 (652)
T 2b9v_A 62 NAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDA 141 (652)
T ss_dssp SEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHH
T ss_pred CccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCCcccccccccccccccccchhhHH
Confidence 357889999887541 112221 1 555 58999999999999988 12 2 677899
Q ss_pred HHHHHHhhcc--CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 182 ESTVRSESNR--SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 182 ~~~l~~~~~~--~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
.++++.+..+ ....++.++|||+||.+++.+|..+|+.++++|.+++....
T Consensus 142 ~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 142 WDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp HHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred HHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 9999988765 22358999999999999999999999999999998886653
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=98.83 E-value=4.7e-09 Score=112.47 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=76.0
Q ss_pred CCCEEEEeCCCCCCcccH--------------H----HHHHHh-cCCceEEEEeCCCCCCCC------------HHHHH-
Q 005190 131 DSPLLLFLPGIDGVGLGL--------------I----RQHQRL-GKIFDIWCLHIPVKDRTS------------FTGLV- 178 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~--------------~----~~~~~L-~~~~~Vi~~Dl~G~G~Ss------------~~~~~- 178 (709)
..|+||++||.+++...+ . .++..| .+||.|+++|++|+|.|. ...++
T Consensus 113 ~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~ 192 (391)
T 3g8y_A 113 AVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSR 192 (391)
T ss_dssp CEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHH
T ss_pred CCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCcccccccccchHHHHHH
Confidence 467999999998876422 2 466777 479999999999999883 22332
Q ss_pred --------------HHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 179 --------------KLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 179 --------------~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
.|+..+++.+..... ..++.++||||||.+|+.+|+.. ++++++|++++...+
T Consensus 193 ~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a~v~~~~~~~~ 261 (391)
T 3g8y_A 193 FLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYAFVYNDFLCQT 261 (391)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEESCBCCH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeEEEEccCCCCc
Confidence 677788888765432 35799999999999999888764 568888888765443
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.5e-08 Score=102.84 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=63.9
Q ss_pred CCCEEEEeCCCCC--CcccHHHHHHHhc--CC---ceEEEEeCCCCC------C----C---------------------
Q 005190 131 DSPLLLFLPGIDG--VGLGLIRQHQRLG--KI---FDIWCLHIPVKD------R----T--------------------- 172 (709)
Q Consensus 131 ~~p~Vv~lHG~~~--s~~~~~~~~~~L~--~~---~~Vi~~Dl~G~G------~----S--------------------- 172 (709)
.-|+|+++||.+. +...+..+...+. .+ +-|+++|.++.+ + +
T Consensus 47 ~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (275)
T 2qm0_A 47 GYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTG 126 (275)
T ss_dssp CEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCC
T ss_pred CccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCC
Confidence 4678999999753 1122333333331 34 889999998721 0 0
Q ss_pred CHHHHHHHH-HHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 173 SFTGLVKLV-ESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 173 s~~~~~~dl-~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
..+++.+.+ .+++..+...+. ..+++|+||||||.+|+.++.++|+.++++++++|..
T Consensus 127 ~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 127 GAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred ChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 001223332 223333333332 2579999999999999999999999999999998854
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.2e-08 Score=107.46 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=73.6
Q ss_pred CCCEEEEeCCCCCCcccHH------------------HHHHHh-cCCceEEEEeCCCCCCCCH-----------------
Q 005190 131 DSPLLLFLPGIDGVGLGLI------------------RQHQRL-GKIFDIWCLHIPVKDRTSF----------------- 174 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~------------------~~~~~L-~~~~~Vi~~Dl~G~G~Ss~----------------- 174 (709)
..|+||++||.+++...+. .++..| .+||.|+++|++|+|.|..
T Consensus 118 ~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~ 197 (398)
T 3nuz_A 118 PVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSR 197 (398)
T ss_dssp CEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHH
T ss_pred CccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCccccccccccccccchhhhhh
Confidence 4679999999988755322 467777 4799999999999998831
Q ss_pred ----------HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 175 ----------TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 175 ----------~~~~~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
...+.|+..+++.+..... ..++.++||||||.+++.+|+..+ +++++|.+++..
T Consensus 198 ~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~i~a~v~~~~~~ 264 (398)
T 3nuz_A 198 YLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-SIYAFVYNDFLC 264 (398)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-TCCEEEEESCBC
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-cEEEEEEecccc
Confidence 1123677778888765432 357999999999999998887754 677787775533
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=8.5e-08 Score=102.88 Aligned_cols=101 Identities=14% Similarity=0.062 Sum_probs=65.4
Q ss_pred CCCEEEEeCCCCCC-cccHHHHHHHh-cCCc----eEEEEeCCCCC-CC-------CHHH-HHHHHHHHHHHhhc-cCCC
Q 005190 131 DSPLLLFLPGIDGV-GLGLIRQHQRL-GKIF----DIWCLHIPVKD-RT-------SFTG-LVKLVESTVRSESN-RSPK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s-~~~~~~~~~~L-~~~~----~Vi~~Dl~G~G-~S-------s~~~-~~~dl~~~l~~~~~-~~~~ 194 (709)
..|+|+++||.+.. ...+..++..| ++++ .|+++|.+|++ ++ .+.+ +.+++...++.... ....
T Consensus 196 ~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~~~~~d~ 275 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRA 275 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCCG
T ss_pred CCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 57899999994321 11223355666 3444 49999998732 12 1222 22344444443111 1123
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+++|+||||||.+|+.++.++|+.+.+++++++...
T Consensus 276 ~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 276 DRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 312 (403)
T ss_dssp GGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred CceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccc
Confidence 5799999999999999999999999999999988653
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=5.7e-06 Score=85.03 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=39.1
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhhcC------CcEEEEEcCCCccccccCh
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~~~------~~~~~~i~~aGH~~~le~p 379 (709)
..|++++||++|.+||++. ++++.+.+. +++++.++++||....+.+
T Consensus 90 ~~Pvli~HG~~D~vVP~~~-s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPNV-MNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp GCEEEEEEETTCCSSCHHH-HHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSC
T ss_pred CCcEEEEeCCCCCCcCHHH-HHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCc
Confidence 3699999999999999997 888877553 4688999999999876654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.10 E-value=7e-06 Score=101.46 Aligned_cols=90 Identities=19% Similarity=0.308 Sum_probs=70.2
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~ 211 (709)
.+.++|+|+.++....|..+...|. .+.|++++.++. +++++...+.+..+ .+..++.++|||+||.+|..
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~-~~~v~~l~~~~~-----~~~~~~~~~~i~~~---~~~gp~~l~G~S~Gg~lA~e 1128 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEE-----EDRLDRYADLIQKL---QPEGPLTLFGYSAGCSLAFE 1128 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC-SCEEEECBCCCS-----TTHHHHHHHHHHHH---CCSSCEEEEEETTHHHHHHH
T ss_pred CCcceeecccccchHHHHHHHhccc-ccceEeecccCH-----HHHHHHHHHHHHHh---CCCCCeEEEEecCCchHHHH
Confidence 5679999999999999998888887 899999988543 45555555555442 33468999999999999999
Q ss_pred HHHhC---CCceeEEEEecCCC
Q 005190 212 VAARN---PDIDLVLILVNPAT 230 (709)
Q Consensus 212 ~A~~~---P~~v~~lVl~~p~~ 230 (709)
+|.+. .+.+..++++++..
T Consensus 1129 ~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1129 AAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp HHHHHHHSSCCEEEEEEESCCE
T ss_pred HHHHHHhCCCceeEEEEecCcc
Confidence 99764 45588899988743
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.2e-05 Score=81.47 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=31.3
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
.+++|+||||||.+|+.++.+ |+.++++++++|.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 459999999999999999999 9999999999874
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.06 E-value=8.6e-06 Score=84.51 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=32.5
Q ss_pred CEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
...|+||||||..|+.++.++|+.+.+++.++|..+
T Consensus 138 ~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w 173 (331)
T 3gff_A 138 INVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLW 173 (331)
T ss_dssp EEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTT
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhc
Confidence 357999999999999999999999999999988654
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00021 Score=77.73 Aligned_cols=103 Identities=17% Similarity=0.044 Sum_probs=74.6
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHH-----------------HhcCCceEEEEeC-CCCCCC-----------------CH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQ-----------------RLGKIFDIWCLHI-PVKDRT-----------------SF 174 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~-----------------~L~~~~~Vi~~Dl-~G~G~S-----------------s~ 174 (709)
...|++|+++|.+|++..+..+.+ .+.+..+++.+|. .|.|.| +.
T Consensus 65 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~ 144 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDL 144 (483)
T ss_dssp SSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSH
T ss_pred cCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCCH
Confidence 468999999999998887754331 1123478999997 699987 12
Q ss_pred HHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHHhC------------CCceeEEEEecCCCCc
Q 005190 175 TGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN------------PDIDLVLILVNPATSF 232 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~---~~~v~LvGhS~GG~iAl~~A~~~------------P~~v~~lVl~~p~~~~ 232 (709)
++.++++..++.......+ ..+++|.|+|+||..+..+|..- +=.++|+++.++....
T Consensus 145 ~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~ 217 (483)
T 1ac5_A 145 EDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDP 217 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCH
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCcccc
Confidence 4566777777776554443 57899999999999998887531 1348899998887654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00042 Score=73.65 Aligned_cols=104 Identities=13% Similarity=-0.006 Sum_probs=74.3
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHH-----------------HhcCCceEEEEe-CCCCCCC--------CHHHHHHHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQ-----------------RLGKIFDIWCLH-IPVKDRT--------SFTGLVKLVE 182 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~-----------------~L~~~~~Vi~~D-l~G~G~S--------s~~~~~~dl~ 182 (709)
..+.|++|+++|.+|++..+..+.+ .+.+..+++-+| ..|.|.| +.++.++|+.
T Consensus 41 ~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~ 120 (421)
T 1cpy_A 41 PAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVY 120 (421)
T ss_dssp TTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHH
T ss_pred CCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHH
Confidence 3468999999999988776643221 011346899999 4688988 3356677777
Q ss_pred HHHHHhhccCC---C--CCEEEEEechhHHHHHHHHHhC------CCceeEEEEecCCCCc
Q 005190 183 STVRSESNRSP---K--RPVYLVGESLGACIALAVAARN------PDIDLVLILVNPATSF 232 (709)
Q Consensus 183 ~~l~~~~~~~~---~--~~v~LvGhS~GG~iAl~~A~~~------P~~v~~lVl~~p~~~~ 232 (709)
.++.....+.+ . .+++|.|+|+||..+..+|..- .=.++|+++.++....
T Consensus 121 ~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~dp 181 (421)
T 1cpy_A 121 NFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp HHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCCH
T ss_pred HHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccCh
Confidence 77776655443 3 6899999999999988888642 1237899888887653
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=6.1e-05 Score=73.98 Aligned_cols=103 Identities=16% Similarity=0.056 Sum_probs=76.3
Q ss_pred CCCCEEEEeCCCCCCcccH-HHHHH-----------Hh-------cCCceEEEEeC-CCCCCC-----------CHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGL-IRQHQ-----------RL-------GKIFDIWCLHI-PVKDRT-----------SFTGLV 178 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~-~~~~~-----------~L-------~~~~~Vi~~Dl-~G~G~S-----------s~~~~~ 178 (709)
...|++|+++|.+|++..+ ..+.+ .| .+..+++.+|. .|.|.| +.++.+
T Consensus 46 ~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a 125 (255)
T 1whs_A 46 QPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTA 125 (255)
T ss_dssp CSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHHH
Confidence 4689999999999988776 54331 11 24578999996 599988 235667
Q ss_pred HHHHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHhC------CCceeEEEEecCCCCc
Q 005190 179 KLVESTVRSESNRS---PKRPVYLVGESLGACIALAVAARN------PDIDLVLILVNPATSF 232 (709)
Q Consensus 179 ~dl~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~~------P~~v~~lVl~~p~~~~ 232 (709)
+|+..+++....+. ...+++|.|+|+||..+..+|..- .-.++|+++.++....
T Consensus 126 ~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 126 HDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp HHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred HHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCH
Confidence 77777777665533 357899999999999998888642 2358999999997764
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.83 E-value=5.9e-05 Score=81.25 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=72.4
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHH-----------Hh-------cCCceEEEEeC-CCCCCC---------CHHHHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQ-----------RL-------GKIFDIWCLHI-PVKDRT---------SFTGLVKLV 181 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~-----------~L-------~~~~~Vi~~Dl-~G~G~S---------s~~~~~~dl 181 (709)
...|+||++||.+|++..+..+.+ .+ .+..+++.+|. .|.|.| +-.+.++|+
T Consensus 46 ~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~ 125 (452)
T 1ivy_A 46 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSN 125 (452)
T ss_dssp GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHH
Confidence 458999999999998877644322 11 24588999996 799998 123455554
Q ss_pred HHHHHHhhcc---CCCCCEEEEEechhHHHHHHHHHh----CCCceeEEEEecCCCCc
Q 005190 182 ESTVRSESNR---SPKRPVYLVGESLGACIALAVAAR----NPDIDLVLILVNPATSF 232 (709)
Q Consensus 182 ~~~l~~~~~~---~~~~~v~LvGhS~GG~iAl~~A~~----~P~~v~~lVl~~p~~~~ 232 (709)
..++...... ....+++|.|+|+||..+..+|.. .+-.++|+++.++....
T Consensus 126 ~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d~ 183 (452)
T 1ivy_A 126 FEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSY 183 (452)
T ss_dssp HHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBH
T ss_pred HHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccCh
Confidence 4444443332 345789999999999966666653 35679999999997764
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00048 Score=70.08 Aligned_cols=101 Identities=16% Similarity=0.094 Sum_probs=64.7
Q ss_pred CCCEEEEeCCCCCCcccHHHHH--HHhc--CCceEEEEeCC-------C---------CCCC--------------CH-H
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQH--QRLG--KIFDIWCLHIP-------V---------KDRT--------------SF-T 175 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~--~~L~--~~~~Vi~~Dl~-------G---------~G~S--------------s~-~ 175 (709)
.-|+|.++||++++...|.... ..+. .+..++++|.. + .|.+ .+ .
T Consensus 48 ~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHH
T ss_pred CcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHH
Confidence 4689999999999998887632 2222 35667777632 1 1111 11 2
Q ss_pred HHHHHHHHHHHHhhccC------CCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 005190 176 GLVKLVESTVRSESNRS------PKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~------~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~ 231 (709)
.+.+++..+++..-... ...+..|.||||||.-|+.+|.++ |+...++...++...
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 34556666665432111 124689999999999999999986 566777776666443
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=97.70 E-value=3.2e-05 Score=85.00 Aligned_cols=101 Identities=13% Similarity=0.038 Sum_probs=70.9
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc-C-CceEEEEeCC----CCCCCC----------HHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG-K-IFDIWCLHIP----VKDRTS----------FTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~-~-~~~Vi~~Dl~----G~G~Ss----------~~~~~~dl~~~l~~~~~~ 191 (709)
..|+||++||.+ ++...+......|+ + ++.|+.+|+| |++.+. ...-..|....++.++..
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~ 177 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKEN 177 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHHHH
Confidence 468999999987 55544333345553 3 4999999999 777651 123355666666665543
Q ss_pred ---C--CCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 005190 192 ---S--PKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (709)
Q Consensus 192 ---~--~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~ 231 (709)
. ..++|.|+|+|.||.+++.++... ...++++|+.++...
T Consensus 178 i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 178 IAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 2 236799999999999998887753 567999999988543
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=97.63 E-value=3.7e-05 Score=84.36 Aligned_cols=100 Identities=16% Similarity=0.089 Sum_probs=67.0
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc-C-CceEEEEeCC----CCCCC-------CHHHHHHHHHHHHHHhhcc---
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG-K-IFDIWCLHIP----VKDRT-------SFTGLVKLVESTVRSESNR--- 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~-~-~~~Vi~~Dl~----G~G~S-------s~~~~~~dl~~~l~~~~~~--- 191 (709)
+.|+||++||.+ ++...+......|+ + ++.|+.+|+| |++.+ ....-..|+..+++.++..
T Consensus 96 ~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~ 175 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISA 175 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHHHH
Confidence 368999999964 44444333344553 3 4999999999 55543 1122344555555554432
Q ss_pred C--CCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 005190 192 S--PKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (709)
Q Consensus 192 ~--~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~ 230 (709)
. ...+|.|+|||+||.+++.++... ++.++++|+.++..
T Consensus 176 fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 176 FGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred hCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 1 235799999999999998877654 57899999998855
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00024 Score=71.19 Aligned_cols=93 Identities=19% Similarity=0.168 Sum_probs=63.7
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEE-EeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWC-LHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~-~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~ 204 (709)
+..||.+||... +..+... .++.+.. .|.++.+.- .+..+.+++..+++.+..+.+..++++.||||
T Consensus 74 ~~iVva~RGT~~----~~d~l~d--~~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSL 147 (269)
T 1tib_A 74 KLIVLSFRGSRS----IENWIGN--LNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSL 147 (269)
T ss_dssp TEEEEEECCCSC----THHHHTC--CCCCEEECTTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETH
T ss_pred CEEEEEEeCCCC----HHHHHHh--cCeeeeecCCCCCCCEecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCCh
Confidence 457999999863 2222222 3455555 466553222 56778888888888888778788999999999
Q ss_pred hHHHHHHHHHhCCC---ceeEEEEecCCC
Q 005190 205 GACIALAVAARNPD---IDLVLILVNPAT 230 (709)
Q Consensus 205 GG~iAl~~A~~~P~---~v~~lVl~~p~~ 230 (709)
||.+|..+|..... .+..+++.+|..
T Consensus 148 GGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 148 GGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 99999999987643 366555555543
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00023 Score=79.07 Aligned_cols=100 Identities=14% Similarity=-0.001 Sum_probs=66.4
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCC----CCC------CCHHHHHHHHHHHHHHhhcc---C
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPV----KDR------TSFTGLVKLVESTVRSESNR---S 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G----~G~------Ss~~~~~~dl~~~l~~~~~~---~ 192 (709)
..|+||++||.+ ++..........|+ .++-|+.+++|- ++. .....-..|...+++.++.. .
T Consensus 111 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 190 (543)
T 2ha2_A 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAF 190 (543)
T ss_dssp CEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHh
Confidence 358999999965 33332222234453 589999999992 221 13344455666666665542 2
Q ss_pred --CCCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 005190 193 --PKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (709)
Q Consensus 193 --~~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~ 230 (709)
..++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 191 ggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 191 GGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 236899999999999998777653 56799999998753
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0037 Score=65.18 Aligned_cols=88 Identities=11% Similarity=-0.010 Sum_probs=60.3
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeC-----------CCCCCC-----------CHHHHHHHHHHHHHHhh
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHI-----------PVKDRT-----------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl-----------~G~G~S-----------s~~~~~~dl~~~l~~~~ 189 (709)
-|+||.+||... .+..||.++.++. +|+|.= .+..|+=++..+++++.
T Consensus 138 ~Pvii~~~~~~~----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~ 207 (433)
T 4g4g_A 138 FPAIIGIGGASI----------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLE 207 (433)
T ss_dssp EEEEEEESCCCS----------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcc----------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHHHHHHHhHHHHHHHHH
Confidence 456777886321 2567899999875 343310 22334446666777765
Q ss_pred c------cCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 190 N------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 190 ~------~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
. ....++|.++|||+||..|+.+|+..+ +|+.+|..++..
T Consensus 208 ~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 208 QVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp HHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred hccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 5 233478999999999999999999875 788888877643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=4.6e-05 Score=98.62 Aligned_cols=92 Identities=20% Similarity=0.279 Sum_probs=0.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
.++++|+|+.+++...|..+...|. ..|+.+.++|...- ++++++++..+.+.. ..+..++.|+||||||.+|.
T Consensus 2242 ~~~Lfc~~~agG~~~~y~~l~~~l~--~~v~~lq~pg~~~~~~i~~la~~~~~~i~~---~~p~gpy~L~G~S~Gg~lA~ 2316 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSITVFHGLAAKLS--IPTYGLQCTGAAPLDSIQSLASYYIECIRQ---VQPEGPYRIAGYSYGACVAF 2316 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHHHHHHHHHhhC--CcEEEEecCCCCCCCCHHHHHHHHHHHHHH---hCCCCCEEEEEECHhHHHHH
Confidence 4579999999999999999988885 78888888883221 566666665555544 23346899999999999999
Q ss_pred HHHHhCCC---cee---EEEEecC
Q 005190 211 AVAARNPD---IDL---VLILVNP 228 (709)
Q Consensus 211 ~~A~~~P~---~v~---~lVl~~p 228 (709)
.+|.+..+ .+. .+++++.
T Consensus 2317 evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2317 EMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ------------------------
T ss_pred HHHHHHHHcCCCCCccceEEEEeC
Confidence 99976432 233 5667665
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=66.66 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=54.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
+..||.+||... ...+...+ .+.....|....|.. .+..+.+++...++.+..+.+..++++.|||||
T Consensus 74 ~~iVvafRGT~~----~~d~~~d~--~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLG 147 (279)
T 1tia_A 74 SAVVLAFRGSYS----VRNWVADA--TFVHTNPGLCDGCLAELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLG 147 (279)
T ss_pred CEEEEEEeCcCC----HHHHHHhC--CcEeecCCCCCCCccChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHH
Confidence 557999999864 23333333 233333444322222 456667777778877777777789999999999
Q ss_pred HHHHHHHHHhCC
Q 005190 206 ACIALAVAARNP 217 (709)
Q Consensus 206 G~iAl~~A~~~P 217 (709)
|.+|..+|....
T Consensus 148 GalA~l~a~~l~ 159 (279)
T 1tia_A 148 AAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00021 Score=79.43 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=65.6
Q ss_pred CCEEEEeCCCC---CCcccHHHHHHHh-cCCceEEEEeCCCC----CCC-----CHHHHHHHHHHHHHHhhcc---C--C
Q 005190 132 SPLLLFLPGID---GVGLGLIRQHQRL-GKIFDIWCLHIPVK----DRT-----SFTGLVKLVESTVRSESNR---S--P 193 (709)
Q Consensus 132 ~p~Vv~lHG~~---~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~----G~S-----s~~~~~~dl~~~l~~~~~~---~--~ 193 (709)
.|+||++||.+ ++..........| ..++-|+.+|+|.. ..+ ....-..|...+++.++.. . .
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggD 194 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGR 194 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCC
Confidence 68999999943 3333222223344 47899999999942 111 2233345555555555443 2 2
Q ss_pred CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 005190 194 KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~ 230 (709)
..+|.|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 195 p~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 195 PDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 4679999999999999888766 367899999998753
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0009 Score=73.86 Aligned_cols=100 Identities=11% Similarity=-0.018 Sum_probs=66.9
Q ss_pred CCCEEEEeCCCCC---CcccHHH--HHHHhcCCceEEEEeCC----CCCCC-------CHHHHHHHHHHHHHHhhccC--
Q 005190 131 DSPLLLFLPGIDG---VGLGLIR--QHQRLGKIFDIWCLHIP----VKDRT-------SFTGLVKLVESTVRSESNRS-- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~~~~~~--~~~~L~~~~~Vi~~Dl~----G~G~S-------s~~~~~~dl~~~l~~~~~~~-- 192 (709)
..|+||++||.+- +...+.. ++.....++-|+.+|+| |++.+ +...-..|....++.++...
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~ 180 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 180 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHH
Confidence 4689999999752 2222222 22223468999999999 44443 23445667777777665432
Q ss_pred ---CCCCEEEEEechhHHHHHHHHHhC----CCceeEEEEecCCC
Q 005190 193 ---PKRPVYLVGESLGACIALAVAARN----PDIDLVLILVNPAT 230 (709)
Q Consensus 193 ---~~~~v~LvGhS~GG~iAl~~A~~~----P~~v~~lVl~~p~~ 230 (709)
...+|.|+|+|.||..+..++... +..+.++|+.++..
T Consensus 181 fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 181 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 235899999999998776666543 56789999988753
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0031 Score=68.52 Aligned_cols=99 Identities=9% Similarity=0.110 Sum_probs=74.2
Q ss_pred CCCEEEEeCCCCCCcccHHH---HHHHhc--CCceEEEEeCCCCCCC----------------CHHHHHHHHHHHHHHhh
Q 005190 131 DSPLLLFLPGIDGVGLGLIR---QHQRLG--KIFDIWCLHIPVKDRT----------------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~---~~~~L~--~~~~Vi~~Dl~G~G~S----------------s~~~~~~dl~~~l~~~~ 189 (709)
++|++|++-|= ++...+.. +...++ -+.-++.++.|-+|.| +.++-..|+..++.+++
T Consensus 42 ~gPIfl~~gGE-g~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k 120 (472)
T 4ebb_A 42 EGPIFFYTGNE-GDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALR 120 (472)
T ss_dssp TCCEEEEECCS-SCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-ccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHH
Confidence 36766666553 33322221 223343 3678999999999999 45778889999999887
Q ss_pred ccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 190 NRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 190 ~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
.... ..|++++|-|+||++|..+-.++|+.+.|.+..+.+.
T Consensus 121 ~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 121 RDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred hhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 7553 4689999999999999999999999999998876643
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00059 Score=75.56 Aligned_cols=100 Identities=13% Similarity=0.000 Sum_probs=66.0
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCC----CCCC------CCHHHHHHHHHHHHHHhhcc---C
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIP----VKDR------TSFTGLVKLVESTVRSESNR---S 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~----G~G~------Ss~~~~~~dl~~~l~~~~~~---~ 192 (709)
+.|+||++||.+ ++..........|+ .++-|+.+++| |++. .....-..|...+++.++.. .
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 185 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAF 185 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHh
Confidence 468999999964 33333222234453 58999999999 2221 13333445555555555432 2
Q ss_pred C--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 005190 193 P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (709)
Q Consensus 193 ~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~ 230 (709)
+ ..+|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 186 ggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 186 GGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred CCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 2 35799999999999998887764 45799999998854
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0007 Score=75.13 Aligned_cols=99 Identities=12% Similarity=-0.024 Sum_probs=65.6
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHh--cCCceEEEEeCC----CCCCC-----CHHHHHHHHHHHHHHhhcc---CC
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRL--GKIFDIWCLHIP----VKDRT-----SFTGLVKLVESTVRSESNR---SP 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L--~~~~~Vi~~Dl~----G~G~S-----s~~~~~~dl~~~l~~~~~~---~~ 193 (709)
+.|+||++||.+ ++...|... .| ..++-|+.+++| |++.+ ....-..|...+++.++.. .+
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 191 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG 191 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcC
Confidence 468999999953 333333222 23 268999999999 44332 1122234555555555432 22
Q ss_pred --CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCCC
Q 005190 194 --KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATS 231 (709)
Q Consensus 194 --~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~~ 231 (709)
..+|.|+|||.||..+..++.. .++.++++|+.++...
T Consensus 192 gDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 192 GNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 3689999999999999888876 3678999999887543
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0059 Score=61.25 Aligned_cols=104 Identities=18% Similarity=0.110 Sum_probs=74.7
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHHH-----------h-------cCCceEEEEeCC-CCCCC---------CHHHHHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQR-----------L-------GKIFDIWCLHIP-VKDRT---------SFTGLVKL 180 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~~-----------L-------~~~~~Vi~~Dl~-G~G~S---------s~~~~~~d 180 (709)
..+.|+||++.|.+|++..+..+.+. + .+..+++.+|.| |-|.| +..+.++|
T Consensus 47 p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~~~~~~~~~~a~d 126 (300)
T 4az3_A 47 PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQS 126 (300)
T ss_dssp TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTCCCCCBHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCCcccccccCCCcccccchhhHHH
Confidence 34689999999999988877554431 1 123689999966 78888 34566666
Q ss_pred HHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHhC----CCceeEEEEecCCCCc
Q 005190 181 VESTVRSESNRS---PKRPVYLVGESLGACIALAVAARN----PDIDLVLILVNPATSF 232 (709)
Q Consensus 181 l~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~~----P~~v~~lVl~~p~~~~ 232 (709)
+..++....... ...+++|.|.|+||..+-.+|..- .=.++|+++.++....
T Consensus 127 ~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d~ 185 (300)
T 4az3_A 127 NFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSY 185 (300)
T ss_dssp HHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBH
T ss_pred HHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccCH
Confidence 666665544433 367899999999999998888643 2238899999886653
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.003 Score=63.18 Aligned_cols=59 Identities=22% Similarity=0.218 Sum_probs=44.2
Q ss_pred CceEEEEeCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC
Q 005190 158 IFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN 216 (709)
Q Consensus 158 ~~~Vi~~Dl~G~-G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~ 216 (709)
...+...++||+ |.. .+..+.+++...++.+....+..++++.||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 566677788874 222 55667777777777666666677899999999999999988765
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0023 Score=64.01 Aligned_cols=77 Identities=17% Similarity=0.145 Sum_probs=52.4
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+..||.++|.. +. ..+...+. ....++++.... .+..+.+++...++.+..+.+..++++.|||
T Consensus 74 ~~ivvafRGT~-~~---~d~~~d~~----~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~~~~i~vtGHS 145 (269)
T 1lgy_A 74 KTIYLVFRGTN-SF---RSAITDIV----FNFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHS 145 (269)
T ss_dssp TEEEEEEECCS-CC---HHHHHTCC----CCEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred CEEEEEEeCCC-cH---HHHHhhcC----cccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCCCCeEEEeccC
Confidence 45799999983 22 23333332 123345543222 4566777788888877777778899999999
Q ss_pred hhHHHHHHHHHhC
Q 005190 204 LGACIALAVAARN 216 (709)
Q Consensus 204 ~GG~iAl~~A~~~ 216 (709)
|||.+|..+|...
T Consensus 146 LGGalA~l~a~~~ 158 (269)
T 1lgy_A 146 LGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999988765
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0085 Score=61.68 Aligned_cols=88 Identities=9% Similarity=-0.051 Sum_probs=59.5
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeC-----------CCCCCC-----------CHHHHHHHHHHHHHHhh
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHI-----------PVKDRT-----------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl-----------~G~G~S-----------s~~~~~~dl~~~l~~~~ 189 (709)
-|+||-+||..-. +.+||.++.++. +|+|.= .+..++=++..+++++.
T Consensus 106 ~Pvii~i~~~~~~----------~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~ 175 (375)
T 3pic_A 106 YPAIIGYGGGSLP----------APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALE 175 (375)
T ss_dssp EEEEEEETTCSSC----------CCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCccc----------cCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHHHHH
Confidence 3567778873211 457888888864 233310 23344446777777776
Q ss_pred ccC----CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 190 NRS----PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 190 ~~~----~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
.+- ..++|.++|||+||..|+.+|+..+ +|+.+|..++..
T Consensus 176 ~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 176 LVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp HCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred hCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 542 2368999999999999999999875 788888777643
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0068 Score=59.26 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=70.2
Q ss_pred CCCEEEEeCCCCCCc----ccHHHHHHHhcCCceEEEEe-CCCCCCC---CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 131 DSPLLLFLPGIDGVG----LGLIRQHQRLGKIFDIWCLH-IPVKDRT---SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~----~~~~~~~~~L~~~~~Vi~~D-l~G~G~S---s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
++|+|++.||.+... .....+...|...+.+-.++ +|-...+ +..+=++++...++....+.+..+++|.|+
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GY 81 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAFPMWPSVEKGVAELILQIELKLDADPYADFAMAGY 81 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcccCccchHHHHHHHHHHHHHHHHhhCCCCeEEEEee
Confidence 478999999997742 12456777776666666663 6665433 445556666777777667799999999999
Q ss_pred chhHHHHHHHHHhC-----------CCceeEEEEecC
Q 005190 203 SLGACIALAVAARN-----------PDIDLVLILVNP 228 (709)
Q Consensus 203 S~GG~iAl~~A~~~-----------P~~v~~lVl~~p 228 (709)
|.|+.++-.++... .++|.++++.+-
T Consensus 82 SQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGd 118 (254)
T 3hc7_A 82 SQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGN 118 (254)
T ss_dssp THHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESC
T ss_pred CchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeC
Confidence 99999998887652 346888888754
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0011 Score=73.43 Aligned_cols=100 Identities=12% Similarity=-0.002 Sum_probs=65.7
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHh--cCCceEEEEeCC----CCCC------CCHHHHHHHHHHHHHHhhcc---C
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRL--GKIFDIWCLHIP----VKDR------TSFTGLVKLVESTVRSESNR---S 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L--~~~~~Vi~~Dl~----G~G~------Ss~~~~~~dl~~~l~~~~~~---~ 192 (709)
+.|+||++||.+ ++..........| ..++-|+.+++| |+.. .....-..|....++.++.. .
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~f 187 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFF 187 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 468999999954 3333321223444 368999999999 2221 13333455555555555442 2
Q ss_pred --CCCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 005190 193 --PKRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (709)
Q Consensus 193 --~~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~ 230 (709)
...+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 188 ggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 188 GGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 23689999999999999887765 246799999998854
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0035 Score=70.08 Aligned_cols=100 Identities=12% Similarity=-0.028 Sum_probs=65.4
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCC----CCCCC------------CHHHHHHHHHHHHHHhh
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIP----VKDRT------------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~----G~G~S------------s~~~~~~dl~~~l~~~~ 189 (709)
..|+||++||.+ ++..........|+ .++-|+.+++| |+... ....-..|...+++.++
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 219 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 219 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHH
Confidence 468999999954 33332222234443 57999999999 32211 22334556666666665
Q ss_pred ccC---C--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 005190 190 NRS---P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (709)
Q Consensus 190 ~~~---~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~ 230 (709)
... + ..+|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 220 ~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 220 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 432 2 35899999999999887776653 46789999988754
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0042 Score=68.66 Aligned_cols=99 Identities=17% Similarity=0.054 Sum_probs=64.2
Q ss_pred CCCEEEEeCCCCC---CcccH--HHHHH-Hh--cCCceEEEEeCCCC----CCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDG---VGLGL--IRQHQ-RL--GKIFDIWCLHIPVK----DRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~~~~--~~~~~-~L--~~~~~Vi~~Dl~G~----G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
..|+||++||.+- +...+ ..++. .+ ..++-|+.+++|.- ..+ ....-..|....++.++..
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 192 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 4689999999753 33222 22332 23 25799999999942 111 2233456666666666542
Q ss_pred ---C--CCCCEEEEEechhHHHHHHHHHhC--------CCceeEEEEecCC
Q 005190 192 ---S--PKRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPA 229 (709)
Q Consensus 192 ---~--~~~~v~LvGhS~GG~iAl~~A~~~--------P~~v~~lVl~~p~ 229 (709)
. ...+|.|+|+|.||..+..++... +..++++|+.++.
T Consensus 193 i~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred HHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 2 236899999999998777665543 5568999998874
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.012 Score=58.14 Aligned_cols=101 Identities=20% Similarity=0.097 Sum_probs=68.7
Q ss_pred CCCCEEEEeCCCCCCcccH-HHHHH-----------Hh-------cCCceEEEEeC-CCCCCC----------CHHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGL-IRQHQ-----------RL-------GKIFDIWCLHI-PVKDRT----------SFTGLVK 179 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~-~~~~~-----------~L-------~~~~~Vi~~Dl-~G~G~S----------s~~~~~~ 179 (709)
...|++|+++|.+|++..+ ..+.+ .| .+..+++-+|. .|.|.| +-++.++
T Consensus 52 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a~ 131 (270)
T 1gxs_A 52 AAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMAQ 131 (270)
T ss_dssp GGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHHH
T ss_pred CCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHHHH
Confidence 4689999999999888775 54432 11 13478999995 699998 2245567
Q ss_pred HHHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHh---C-----CCceeEEEEecCCCCc
Q 005190 180 LVESTVRSESNRS---PKRPVYLVGESLGACIALAVAAR---N-----PDIDLVLILVNPATSF 232 (709)
Q Consensus 180 dl~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~---~-----P~~v~~lVl~~p~~~~ 232 (709)
|+..++.....+. ...+++|.|+| |-.+. .+|.. . .=.++|+++.++....
T Consensus 132 d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP-~la~~i~~~n~~~~~inLkGi~ign~~~d~ 193 (270)
T 1gxs_A 132 DTYTFLVKWFERFPHYNYREFYIAGES-GHFIP-QLSQVVYRNRNNSPFINFQGLLVSSGLTND 193 (270)
T ss_dssp HHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHH-HHHHHHHHTTTTCTTCEEEEEEEESCCCBH
T ss_pred HHHHHHHHHHHhChhhcCCCEEEEeCC-CcchH-HHHHHHHhccccccceeeeeEEEeCCccCh
Confidence 7776666655533 35689999999 65544 33321 1 1348899999997664
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0064 Score=67.34 Aligned_cols=100 Identities=12% Similarity=0.029 Sum_probs=64.4
Q ss_pred CCCEEEEeCCCCCC---cccH--HHHHH-Hhc--CCceEEEEeCCCC----CCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 131 DSPLLLFLPGIDGV---GLGL--IRQHQ-RLG--KIFDIWCLHIPVK----DRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s---~~~~--~~~~~-~L~--~~~~Vi~~Dl~G~----G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
..|+||++||.+-. ...+ ..++. .++ .++-|+.+|+|.- ..+ ....-..|....++.++..
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 200 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDN 200 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 46899999996532 2222 12332 333 4699999999952 111 1223355666666665542
Q ss_pred ---C--CCCCEEEEEechhHHHHHHHHHhC--------CCceeEEEEecCCC
Q 005190 192 ---S--PKRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPAT 230 (709)
Q Consensus 192 ---~--~~~~v~LvGhS~GG~iAl~~A~~~--------P~~v~~lVl~~p~~ 230 (709)
. ...+|.|+|+|.||..++.++... +..++++|+.++..
T Consensus 201 i~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 2 236899999999999988777652 45689999998743
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0096 Score=66.30 Aligned_cols=99 Identities=12% Similarity=-0.000 Sum_probs=60.9
Q ss_pred CCCEEEEeCCCCC---CcccH------HHHHHHhc--CCceEEEEeCC----CCCCC-----CHHHHHHHHHHHHHHhhc
Q 005190 131 DSPLLLFLPGIDG---VGLGL------IRQHQRLG--KIFDIWCLHIP----VKDRT-----SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 131 ~~p~Vv~lHG~~~---s~~~~------~~~~~~L~--~~~~Vi~~Dl~----G~G~S-----s~~~~~~dl~~~l~~~~~ 190 (709)
..|+||++||.+- +.... ......|+ .++-|+.+++| |+..+ .-..-..|...+++.++.
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ 176 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHH
Confidence 4689999999752 22110 11123342 46899999999 33322 111124455555555543
Q ss_pred c---CC--CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCC
Q 005190 191 R---SP--KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPA 229 (709)
Q Consensus 191 ~---~~--~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~ 229 (709)
. .+ ..+|.|+|+|.||..+..++.. ....++++|+.++.
T Consensus 177 ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred HHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 2 22 3579999999999999887764 35678899988764
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.013 Score=65.45 Aligned_cols=97 Identities=10% Similarity=0.012 Sum_probs=62.7
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCC----CCC-----CCHHHHHHHHHHHHHHhhcc---C-
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPV----KDR-----TSFTGLVKLVESTVRSESNR---S- 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G----~G~-----Ss~~~~~~dl~~~l~~~~~~---~- 192 (709)
..|+||++||.+ ++...+.. ..|+ .++-|+.+|+|- +.. .....-..|...+++.++.. .
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 207 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFG 207 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhC
Confidence 468999999964 33333322 3343 369999999992 211 12233445555555555442 2
Q ss_pred -CCCCEEEEEechhHHHHHHHHHhCC---CceeEEEEecCC
Q 005190 193 -PKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPA 229 (709)
Q Consensus 193 -~~~~v~LvGhS~GG~iAl~~A~~~P---~~v~~lVl~~p~ 229 (709)
...+|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 208 gdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 208 GDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 2367999999999999988887553 568888887753
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.057 Score=51.23 Aligned_cols=95 Identities=15% Similarity=0.033 Sum_probs=64.2
Q ss_pred EEEEeCCCCCCcc--cHHHHHHHhc---CCceEEEEeCCCCC------CC----CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 134 LLLFLPGIDGVGL--GLIRQHQRLG---KIFDIWCLHIPVKD------RT----SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 134 ~Vv~lHG~~~s~~--~~~~~~~~L~---~~~~Vi~~Dl~G~G------~S----s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
.||+..|-+.... ....+...|. .+-.+..+++|-.. .. +..+=++++...++....+.+..+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 4777777765431 2234555553 23478888998742 12 33455667777777777789999999
Q ss_pred EEEechhHHHHHHHHHh--------------CC----CceeEEEEecC
Q 005190 199 LVGESLGACIALAVAAR--------------NP----DIDLVLILVNP 228 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~--------------~P----~~v~~lVl~~p 228 (709)
|+|+|.|+.++..++.. .| ++|.++++.+-
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGd 133 (207)
T 1g66_A 86 LVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGD 133 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESC
T ss_pred EEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcC
Confidence 99999999999887742 12 45777777754
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.017 Score=52.15 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=50.1
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhhcC------------------------CcEEEEEcCCCccccccChhhHHHHH
Q 005190 331 VKAQMLVLCSGKDQLMPSQEEGERLSSALH------------------------KCEPRNFYGHGHFLLLEDGVDLVTII 386 (709)
Q Consensus 331 i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~------------------------~~~~~~i~~aGH~~~le~p~~~~~~I 386 (709)
-..++|+..|+.|.+++... .+.+.+.+. +.++..+.+|||+++.++|+...+.+
T Consensus 63 ~girvlIy~Gd~D~i~~~~G-t~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~ 141 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLTA-TRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLF 141 (153)
T ss_dssp TTCEEEEEEETTCSSSCHHH-HHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHH
T ss_pred cCceEEEEecCcCcccccHh-HHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHH
Confidence 36899999999999999987 776666553 57788999999999999999999999
Q ss_pred hhc
Q 005190 387 KGA 389 (709)
Q Consensus 387 ~~~ 389 (709)
..|
T Consensus 142 ~~f 144 (153)
T 1whs_B 142 QYF 144 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 965
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.066 Score=50.81 Aligned_cols=81 Identities=14% Similarity=-0.034 Sum_probs=56.0
Q ss_pred EEEEeCCCCCCcc--cHHHHHHHhc---CCceEEEEeCCCCC------CC----CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 134 LLLFLPGIDGVGL--GLIRQHQRLG---KIFDIWCLHIPVKD------RT----SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 134 ~Vv~lHG~~~s~~--~~~~~~~~L~---~~~~Vi~~Dl~G~G------~S----s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
.||+..|-+.+.. ....+...|. .+-++..+++|-.. .. +..+=++++...++....+.+..+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 4777777765531 2234555553 23478888998742 12 33445566777777777789999999
Q ss_pred EEEechhHHHHHHHHH
Q 005190 199 LVGESLGACIALAVAA 214 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~ 214 (709)
|+|+|.|+.++..++.
T Consensus 86 l~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEEeCchHHHHHHHHh
Confidence 9999999999988774
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.014 Score=57.90 Aligned_cols=44 Identities=30% Similarity=0.432 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhC
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN 216 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~ 216 (709)
.+..+.+++...++.+..+.+..++++.||||||.+|..+|...
T Consensus 103 ~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 103 GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHH
Confidence 34556667777777777777788999999999999999888763
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.09 E-value=0.18 Score=47.01 Aligned_cols=95 Identities=13% Similarity=0.046 Sum_probs=65.5
Q ss_pred EEEEeCCCCCCcc---cHHHHHHHhc-----CCceEEEE--eCCCCCC------CCHHHHHHHHHHHHHHhhccCCCCCE
Q 005190 134 LLLFLPGIDGVGL---GLIRQHQRLG-----KIFDIWCL--HIPVKDR------TSFTGLVKLVESTVRSESNRSPKRPV 197 (709)
Q Consensus 134 ~Vv~lHG~~~s~~---~~~~~~~~L~-----~~~~Vi~~--Dl~G~G~------Ss~~~~~~dl~~~l~~~~~~~~~~~v 197 (709)
.||+.-|-..... .-..+...|. ....|+.+ ++|-.-. .+..+-++++...++....+.+..++
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tki 99 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 99 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 5788877755431 1122334342 45778888 7776421 13445566777777777777999999
Q ss_pred EEEEechhHHHHHHHHHhCC----CceeEEEEecC
Q 005190 198 YLVGESLGACIALAVAARNP----DIDLVLILVNP 228 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P----~~v~~lVl~~p 228 (709)
+|+|+|.|+.++-.++...| ++|.++++++-
T Consensus 100 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGd 134 (197)
T 3qpa_A 100 IAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGY 134 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESC
T ss_pred EEEecccccHHHHHHHhcCCHhHHhheEEEEEeeC
Confidence 99999999999988887665 67888888754
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.026 Score=57.43 Aligned_cols=43 Identities=23% Similarity=0.348 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...++.+....+..++++.||||||.+|..+|..
T Consensus 114 a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 114 AWNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 4456666777777777777778899999999999999988865
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.028 Score=55.52 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...++.+..+.+..++++.|||+||.+|..+|..
T Consensus 102 ~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 102 PWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3455555666666666666778899999999999999988765
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.21 Score=46.24 Aligned_cols=95 Identities=13% Similarity=0.072 Sum_probs=63.9
Q ss_pred EEEEeCCCCCCcc---cHH-HHHHHh----cCCceEEEEe--CCCCCC------CCHHHHHHHHHHHHHHhhccCCCCCE
Q 005190 134 LLLFLPGIDGVGL---GLI-RQHQRL----GKIFDIWCLH--IPVKDR------TSFTGLVKLVESTVRSESNRSPKRPV 197 (709)
Q Consensus 134 ~Vv~lHG~~~s~~---~~~-~~~~~L----~~~~~Vi~~D--l~G~G~------Ss~~~~~~dl~~~l~~~~~~~~~~~v 197 (709)
.||+.-|-..... ... .+...| .....|+.++ +|..-. ++...-.+++..+++....+.+..++
T Consensus 16 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tki 95 (187)
T 3qpd_A 16 TFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQI 95 (187)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHSTTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCccccHHHHHHHHHHcCCCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcE
Confidence 4777777654442 111 244444 3446788888 775421 12334456666677666677999999
Q ss_pred EEEEechhHHHHHHHHHhCC----CceeEEEEecC
Q 005190 198 YLVGESLGACIALAVAARNP----DIDLVLILVNP 228 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P----~~v~~lVl~~p 228 (709)
+|+|+|.|+.++-.++...| ++|.++++.+-
T Consensus 96 vl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGd 130 (187)
T 3qpd_A 96 VAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGY 130 (187)
T ss_dssp EEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESC
T ss_pred EEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeC
Confidence 99999999999988876655 46888888754
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=0.23 Score=46.48 Aligned_cols=95 Identities=8% Similarity=0.009 Sum_probs=65.1
Q ss_pred EEEEeCCCCCCcc---cH-HHHHHHhc-----CCceEEEE--eCCCCCC------CCHHHHHHHHHHHHHHhhccCCCCC
Q 005190 134 LLLFLPGIDGVGL---GL-IRQHQRLG-----KIFDIWCL--HIPVKDR------TSFTGLVKLVESTVRSESNRSPKRP 196 (709)
Q Consensus 134 ~Vv~lHG~~~s~~---~~-~~~~~~L~-----~~~~Vi~~--Dl~G~G~------Ss~~~~~~dl~~~l~~~~~~~~~~~ 196 (709)
.||+.-|-+.... .. ..+...|. +...|+.+ ++|-.-. .+..+-++++...++....+.+..+
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tk 106 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 106 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSE
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 5888888755442 11 23444442 34678888 6775421 1344556667777777667799999
Q ss_pred EEEEEechhHHHHHHHHHhCC----CceeEEEEecC
Q 005190 197 VYLVGESLGACIALAVAARNP----DIDLVLILVNP 228 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~~P----~~v~~lVl~~p 228 (709)
++|+|+|.|+.++-.++...| ++|.++++.+-
T Consensus 107 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGd 142 (201)
T 3dcn_A 107 IVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGY 142 (201)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETC
T ss_pred EEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeC
Confidence 999999999999988876655 56888888754
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.039 Score=55.18 Aligned_cols=43 Identities=23% Similarity=0.416 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...++.+....+..++++.|||+||.+|..+|..
T Consensus 116 ~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 116 AYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHH
Confidence 3455556666666666666677899999999999999988864
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.052 Score=54.88 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 174 ~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
+..+.+.+...++.+....+..++++.|||+||.+|..+|..
T Consensus 133 ~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 133 YNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 344445555556655556777899999999999999988875
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.26 Score=49.38 Aligned_cols=72 Identities=18% Similarity=0.228 Sum_probs=53.1
Q ss_pred CCceEEEEeCCCCCC---------C---CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh--------C
Q 005190 157 KIFDIWCLHIPVKDR---------T---SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR--------N 216 (709)
Q Consensus 157 ~~~~Vi~~Dl~G~G~---------S---s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~--------~ 216 (709)
....++.++++..-. + +..+=++++...++....+++..+++|+|+|.|+.++-.++.. .
T Consensus 83 ~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~ 162 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVD 162 (302)
T ss_dssp TTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSC
T ss_pred CcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCC
Confidence 456778888877631 1 3344556677777777777999999999999999999887743 2
Q ss_pred CCceeEEEEecC
Q 005190 217 PDIDLVLILVNP 228 (709)
Q Consensus 217 P~~v~~lVl~~p 228 (709)
+++|.+++|++-
T Consensus 163 ~~~V~aVvLfGd 174 (302)
T 3aja_A 163 EDLVLGVTLIAD 174 (302)
T ss_dssp GGGEEEEEEESC
T ss_pred hHHEEEEEEEeC
Confidence 467888888754
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=92.09 E-value=0.29 Score=44.01 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=47.9
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-----------------------------CcEEEEEcCCCccccccCh
Q 005190 329 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-----------------------------KCEPRNFYGHGHFLLLEDG 379 (709)
Q Consensus 329 ~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-----------------------------~~~~~~i~~aGH~~~le~p 379 (709)
..-.++||+..|+.|.+++.-. .+.+.+.+. +.++..+.+|||+++.++|
T Consensus 60 l~~girVliy~Gd~D~icn~~G-~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP 138 (155)
T 4az3_B 60 SSQKYQILLYNGDVDMACNFMG-DEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKP 138 (155)
T ss_dssp HTCCCEEEEEEETTCSSSCHHH-HHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCH
T ss_pred HHcCceEEEEecccCcccCcHh-HHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCH
Confidence 3346899999999999999887 666554332 2345678899999999999
Q ss_pred hhHHHHHhhc
Q 005190 380 VDLVTIIKGA 389 (709)
Q Consensus 380 ~~~~~~I~~~ 389 (709)
+...+.+.+|
T Consensus 139 ~~al~m~~~f 148 (155)
T 4az3_B 139 LAAFTMFSRF 148 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999966
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=89.57 E-value=0.4 Score=45.18 Aligned_cols=94 Identities=14% Similarity=0.059 Sum_probs=64.6
Q ss_pred EEEEeCCCCCCcc---cHHHHHHH-hcC--CceEEEEeCCCCC-CCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005190 134 LLLFLPGIDGVGL---GLIRQHQR-LGK--IFDIWCLHIPVKD-RTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (709)
Q Consensus 134 ~Vv~lHG~~~s~~---~~~~~~~~-L~~--~~~Vi~~Dl~G~G-~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG 206 (709)
.||+..|-+.+.. ....++.. |.+ +-..+.+++|-.- ..+ .+-++++...++....+.+..+++|+|+|.|+
T Consensus 10 ~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~~y~S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA 88 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADFSQNS-AAGTADIIRRINSGLAANPNVCYILQGYSQGA 88 (205)
T ss_dssp EEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCTTCCC-HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHH
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccCCCcC-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchh
Confidence 4777777655432 23455555 532 3344676766431 003 67778888888887788999999999999999
Q ss_pred HHHHHHHHhC--C----CceeEEEEecC
Q 005190 207 CIALAVAARN--P----DIDLVLILVNP 228 (709)
Q Consensus 207 ~iAl~~A~~~--P----~~v~~lVl~~p 228 (709)
.++-.++... | ++|.+++|++-
T Consensus 89 ~V~~~~~~~lg~~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 89 AATVVALQQLGTSGAAFNAVKGVFLIGN 116 (205)
T ss_dssp HHHHHHHHHHCSSSHHHHHEEEEEEESC
T ss_pred HHHHHHHHhccCChhhhhhEEEEEEEeC
Confidence 9998877654 4 35888888763
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=88.91 E-value=0.69 Score=41.62 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=46.5
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhhcC---------------------------CcEEEEEcCCCccccccChhhHHH
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSALH---------------------------KCEPRNFYGHGHFLLLEDGVDLVT 384 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~~~---------------------------~~~~~~i~~aGH~~~le~p~~~~~ 384 (709)
..++|+..|+.|.+++.-. .+.+.+.+. +.++..+.+|||+++.++|+...+
T Consensus 66 girVliysGd~D~i~~~~G-t~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSS-TRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TCEEEEEEETTCSSSCHHH-HHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred CCeEEEEecccCccCCcHH-HHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 6899999999999999887 665554331 234667899999999999999999
Q ss_pred HHhhc
Q 005190 385 IIKGA 389 (709)
Q Consensus 385 ~I~~~ 389 (709)
.+.+|
T Consensus 145 m~~~f 149 (158)
T 1gxs_B 145 LFKQF 149 (158)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99965
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=87.63 E-value=0.41 Score=49.19 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=24.0
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 182 ~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+.++......+..++++.|||+||.+|..+|..
T Consensus 153 ~~~l~~~~~~~~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 153 LQFLNEKIGPEGKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp HHHHHHHHCTTCCEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhhhccCCceEEEecCChHHHHHHHHHHH
Confidence 3444333223345789999999999999988864
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=82.51 E-value=0.29 Score=51.27 Aligned_cols=37 Identities=24% Similarity=0.221 Sum_probs=25.5
Q ss_pred HHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHHhC
Q 005190 180 LVESTVRSESNRSPK--RPVYLVGESLGACIALAVAARN 216 (709)
Q Consensus 180 dl~~~l~~~~~~~~~--~~v~LvGhS~GG~iAl~~A~~~ 216 (709)
.+...++.+...++. .++++.|||+||.+|..+|...
T Consensus 211 ~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 211 QVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 344444444344543 5799999999999999888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 709 | ||||
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 1e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 0.001 |
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 45.1 bits (106), Expect = 1e-05
Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 9/127 (7%)
Query: 101 FDEAEDMIKSSSG-----GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVG--LGLIRQHQ 153
D++ S G + L + ++ G + R
Sbjct: 6 VRSYLDLLAGLSDFREHFDGSDGFSLDLVDMADGPGEVTVICCAGTAAISGPHEFTRLAG 65
Query: 154 RLGKIFDIWCLHIPVKDRTS--FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211
L I + + P + + + + + +P + G S GA +A A
Sbjct: 66 ALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYA 125
Query: 212 VAARNPD 218
+A D
Sbjct: 126 LATELLD 132
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 39.3 bits (91), Expect = 0.001
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 8/141 (5%)
Query: 122 PLECGSHTRDSPLLLFLPGIDGVGL-----GLIRQHQRLGKIFDIWCLHIPVKDRTSFTG 176
+ S + S +L +PG G I +LG + + P
Sbjct: 21 TCQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLG--YTPCWISPPPFMLNDTQV 78
Query: 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDI-DLVLILVNPATSFNKS 235
+ + + + + S + ++ S G +A P I V L+ A + +
Sbjct: 79 NTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138
Query: 236 VLQSTIPLLELIPGQITTMLS 256
VL + L + + +
Sbjct: 139 VLAGPLDALAVSAPSVWQQTT 159
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 709 | |||
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.96 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.95 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.95 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.95 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.95 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.95 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.95 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.95 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.95 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.94 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.94 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.94 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.94 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.94 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.93 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.93 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.93 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.93 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.92 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.92 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.92 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.91 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.9 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.89 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.88 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.86 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.86 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.86 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.8 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.77 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.77 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.77 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.76 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.75 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.71 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.69 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.67 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.67 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.66 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.66 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.65 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.64 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.63 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.6 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.55 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.54 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.54 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.54 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.52 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.5 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.5 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.49 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.48 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.43 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.39 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.39 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.37 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.36 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.31 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.27 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.27 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.94 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.87 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.85 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.83 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.83 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 98.82 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.8 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 98.67 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.59 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.56 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.56 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.52 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.51 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.5 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.34 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.31 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.24 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.17 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.15 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.14 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.1 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.04 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 97.96 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 97.91 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 97.89 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.76 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.75 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 95.06 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.01 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 94.87 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 94.87 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 94.79 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 93.74 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 92.3 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 92.04 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 91.25 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 91.13 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 91.01 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 89.83 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 89.66 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 88.82 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 88.35 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 88.16 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 83.96 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 83.37 |
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.96 E-value=2.8e-29 Score=255.08 Aligned_cols=242 Identities=14% Similarity=0.122 Sum_probs=157.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcc---cHHHHHHHhcCCceEEEEeCCCCCCC------------CHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVES 183 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~Dl~G~G~S------------s~~~~~~dl~~ 183 (709)
-++|...|+| ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +.+++++++.+
T Consensus 15 ~~h~~~~G~~--~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~ 92 (281)
T d1c4xa_ 15 ASHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILG 92 (281)
T ss_dssp CEEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHH
T ss_pred EEEEEEEecC--CCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhhccc
Confidence 4567778875 6899999999987665 46678899999999999999999999 23566777777
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhc
Q 005190 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (709)
Q Consensus 184 ~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (709)
++++ ...++++++||||||.+|+.+|.++|++++++|++++..............................+....
T Consensus 93 ~i~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (281)
T d1c4xa_ 93 LMNH----FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFV 168 (281)
T ss_dssp HHHH----HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTS
T ss_pred cccc----cccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhc
Confidence 7776 445789999999999999999999999999999999865433222222222222111111111111111111
Q ss_pred CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH------hhhHhhhhcccCCccEEE
Q 005190 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA------ASAYANSRLHAVKAQMLV 337 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~PvLv 337 (709)
.++.... .............. .............. ........+.++++|+|+
T Consensus 169 ~~~~~~~--------~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 227 (281)
T d1c4xa_ 169 YDPENFP--------GMEEIVKSRFEVAN-------------DPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLV 227 (281)
T ss_dssp SCSTTCT--------THHHHHHHHHHHHH-------------CHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEE
T ss_pred ccccccc--------hhhhHHHHHhhhcc-------------cchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEE
Confidence 1110000 00000000000000 00000000000000 001122456889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 338 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 338 i~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
|+|++|.+++++. .+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 228 i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (281)
T d1c4xa_ 228 FHGRQDRIVPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLME 277 (281)
T ss_dssp EEETTCSSSCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred EEeCCCCCcCHHH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 9999999999997 9999999999999999999999999999999999994
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.95 E-value=4.1e-27 Score=240.66 Aligned_cols=246 Identities=17% Similarity=0.145 Sum_probs=159.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHH-HHHHHh-cCCceEEEEeCCCCCCC----------CHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLI-RQHQRL-GKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVR 186 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~-~~~~~L-~~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~ 186 (709)
-++|.+.|+| ++|+|||+||++++...|. .+.+.| .++|+|+++|+||||.| +++++++|+..+++
T Consensus 11 ~i~y~~~G~~--~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~d~~~ll~ 88 (297)
T d1q0ra_ 11 ELWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLD 88 (297)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCC--CCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchhhhhhccccc
Confidence 5778888864 6789999999999999885 466777 57899999999999998 57999999999998
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhc------hhhhHHhHHHhhh
Q 005190 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI------PGQITTMLSSTLS 260 (709)
Q Consensus 187 ~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 260 (709)
+ .+.++++++||||||.+++.+|..+|++|+++|++++........... ....... +.........+..
T Consensus 89 ~----l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (297)
T d1q0ra_ 89 G----WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANI-ERVMRGEPTLDGLPGPQQPFLDALAL 163 (297)
T ss_dssp H----TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHH-HHHHHTCCCSSCSCCCCHHHHHHHHH
T ss_pred c----ccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhh-HHHhhhhhhhhhhhhhhHHHHHHHHH
Confidence 8 566789999999999999999999999999999998865433222111 0001100 0000000000000
Q ss_pred hhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHH-HHHHHHHH----------------hhhH
Q 005190 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLL-WKIELLKA----------------ASAY 323 (709)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------------~~~~ 323 (709)
....... ................. ........... +....... ....
T Consensus 164 ~~~~~~~------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (297)
T d1q0ra_ 164 MNQPAEG------------RAAEVAKRVSKWRILSG----TGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPS 227 (297)
T ss_dssp HHSCCCS------------HHHHHHHHHHHHHHHHC----SSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGG
T ss_pred hccccch------------hhHHHHHHHHHHhhhcc----ccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhcccc
Confidence 0000000 00000000000000000 00000000000 00000000 0112
Q ss_pred hhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 324 ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 324 ~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
....+.++++|+++|+|++|.+++++. ++.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 228 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (297)
T d1q0ra_ 228 RAAELREVTVPTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILA 291 (297)
T ss_dssp GGGGGGGCCSCEEEEEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHH
T ss_pred chhhhhccCCceEEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHHH
Confidence 235678899999999999999999997 8999999999999999999999999999999999994
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.95 E-value=1.8e-27 Score=240.10 Aligned_cols=248 Identities=13% Similarity=0.098 Sum_probs=156.3
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~ 189 (709)
.-++|.+.|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.+++++
T Consensus 13 v~i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~-- 86 (277)
T d1brta_ 13 IDLYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLET-- 86 (277)
T ss_dssp EEEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH--
T ss_pred EEEEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhc--
Confidence 3456788886 778999999999999999999988 57899999999999999 689999999999988
Q ss_pred ccCCCCCEEEEEechhH-HHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh-----HHHhhchhhhHHhHHHhhhhhc
Q 005190 190 NRSPKRPVYLVGESLGA-CIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-----PLLELIPGQITTMLSSTLSLMT 263 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG-~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 263 (709)
.+.++++|+|||||| .++..+|..+|++|+++|++++..+.......... .....+................
T Consensus 87 --l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (277)
T d1brta_ 87 --LDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFF 164 (277)
T ss_dssp --HTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred --cCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhcc
Confidence 456789999999996 55666778889999999999886543322111000 0000000000000000000000
Q ss_pred CchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCC
Q 005190 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKD 343 (709)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D 343 (709)
... ............ .......... .. ................+....+.++++|+++|+|++|
T Consensus 165 ~~~-~~~~~~~~~~~~-~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D 228 (277)
T d1brta_ 165 NDF-YNLDENLGTRIS-EEAVRNSWNT-AA-------------SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGD 228 (277)
T ss_dssp HHH-TTHHHHBTTTBC-HHHHHHHHHH-HH-------------HSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTC
T ss_pred ccc-cccchhhhhhhh-HHHhhhhhcc-cc-------------hhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCC
Confidence 000 000000000000 0000000000 00 0000000000000111223567889999999999999
Q ss_pred CCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 344 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 344 ~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+++.+...+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 274 (277)
T d1brta_ 229 RTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAF 274 (277)
T ss_dssp SSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 9999875356788889999999999999999999999999999944
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.95 E-value=2.8e-27 Score=237.81 Aligned_cols=240 Identities=13% Similarity=0.152 Sum_probs=157.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcc---cHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|+ +|+|||+||++++.. .|..+.+.|+++|+|+++|+||||.| +.+++++++.++++.+
T Consensus 13 ~l~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~i~~l 88 (268)
T d1j1ia_ 13 ETRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAM 88 (268)
T ss_dssp EEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHS
T ss_pred EEEEEEEcC----CCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCccccccccccccchhhHHHh
Confidence 567888886 678999999988765 46668888999999999999999999 6789999999999873
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
. ...+++++||||||.+++.+|.++|++|+++|+++|......... .......... ..............+..
T Consensus 89 ~---~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 161 (268)
T d1j1ia_ 89 N---FDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHE-DLRPIINYDF--TREGMVHLVKALTNDGF- 161 (268)
T ss_dssp C---CSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCS--CHHHHHHHHHHHSCTTC-
T ss_pred h---hcccceeeeccccccccchhhccChHhhheeeecCCCccccccch-hhhhhhhhhh--hhhhhHHHHHHHhhhhh-
Confidence 2 235799999999999999999999999999999998544322111 1111111000 00001111111111000
Q ss_pred hHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh--hHhhhhcccCCccEEEEeeCCCCCC
Q 005190 269 MAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS--AYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
................ .................. ....+.+.++++|+|+|+|++|.++
T Consensus 162 ---------~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~ 222 (268)
T d1j1ia_ 162 ---------KIDDAMINSRYTYATD----------EATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVV 222 (268)
T ss_dssp ---------CCCHHHHHHHHHHHHS----------HHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred ---------hhhhhhhHHHHHhhhh----------hhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCC
Confidence 0000001100000000 000001111111111111 1122457889999999999999999
Q ss_pred CcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 347 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 347 ~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++. .+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 223 ~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~F 264 (268)
T d1j1ia_ 223 PVET-AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSF 264 (268)
T ss_dssp CHHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHH
T ss_pred CHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 9996 99999999999999999999999999999999999954
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=2.4e-27 Score=237.12 Aligned_cols=243 Identities=17% Similarity=0.160 Sum_probs=152.9
Q ss_pred cccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---CHHHHHHHHHHHHHHhhccCCCCC
Q 005190 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---SFTGLVKLVESTVRSESNRSPKRP 196 (709)
Q Consensus 120 ~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---s~~~~~~dl~~~l~~~~~~~~~~~ 196 (709)
+.|...|. +.++|||+||++++...|..+++.|+++|+|+++|+||||.| +..++.+.+.. +.. ...++
T Consensus 2 i~y~~~G~---g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~d~~~~-~~~----~~~~~ 73 (256)
T d1m33a_ 2 IWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEA-VLQ----QAPDK 73 (256)
T ss_dssp CCEEEECC---CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHH-HHT----TSCSS
T ss_pred eEEEEECC---CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccccc-ccc----ccccc
Confidence 34666676 567899999999999999999999999999999999999999 22333333222 222 33678
Q ss_pred EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhh-hhh-HHHhhchhhhHHhHHHhhhhh-cCchhhhHHHH
Q 005190 197 VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ-STI-PLLELIPGQITTMLSSTLSLM-TGDPLKMAMDN 273 (709)
Q Consensus 197 v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 273 (709)
++++||||||.+++.+|.++|+.+++++++++.......... ... .................+... ....
T Consensus 74 ~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 146 (256)
T d1m33a_ 74 AIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQT------- 146 (256)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTS-------
T ss_pred eeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhh-------
Confidence 999999999999999999999999999999875544332211 110 111111111100000000000 0000
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 353 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~ 353 (709)
................... ........+......+. ..+....+.++++|+++|+|++|.++|++. ++
T Consensus 147 -~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~p~~~-~~ 214 (256)
T d1m33a_ 147 -MGTETARQDARALKKTVLA--------LPMPEVDVLNGGLEILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VP 214 (256)
T ss_dssp -TTSTTHHHHHHHHHHHHHT--------SCCCCHHHHHHHHHHHH--HCCCTTGGGGCCSCEEEEEETTCSSSCGGG-CC
T ss_pred -ccccchhhHHHHHHHhhhh--------cchhhHHHHHhhhhhhc--ccchHHHHHhccCCccccccccCCCCCHHH-HH
Confidence 0000000011111111100 00001111111112221 122346778899999999999999999997 88
Q ss_pred HHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 354 RLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 354 ~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+.+.+|++++++++++||++++|+|++++++|.+|
T Consensus 215 ~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 250 (256)
T d1m33a_ 215 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVAL 250 (256)
T ss_dssp -CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCchHHHCHHHHHHHHHHH
Confidence 999999999999999999999999999999999943
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.95 E-value=1.1e-26 Score=236.28 Aligned_cols=251 Identities=14% Similarity=0.130 Sum_probs=158.3
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----------s~~~~~~dl~~~l~~ 187 (709)
.++|.+.|+ +|+|||+||+++++..|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 19 ~l~y~~~G~----gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~ 94 (293)
T d1ehya_ 19 KIHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDA 94 (293)
T ss_dssp EEEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHH
T ss_pred EEEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccchhhhhHHHhhhhh
Confidence 467888876 78999999999999999999999999999999999999987 557889999998887
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch-
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP- 266 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 266 (709)
.+.++++++||||||.+|+.+|.++|+++.++|++++........................ .............
T Consensus 95 ----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 169 (293)
T d1ehya_ 95 ----LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFH-QLDMAVEVVGSSRE 169 (293)
T ss_dssp ----TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHT-TCHHHHHHHTSCHH
T ss_pred ----cCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhh-ccchhhhhhccchh
Confidence 5678999999999999999999999999999999998654221111110000000000000 0000000000000
Q ss_pred -hhhHHHHHh------hccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh-----hHhhhhcccCCcc
Q 005190 267 -LKMAMDNVA------KRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQ 334 (709)
Q Consensus 267 -~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~P 334 (709)
......... .............. ................... .........+++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 236 (293)
T d1ehya_ 170 VCKKYFKHFFDHWSYRDELLTEEELEVHVD-------------NCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLP 236 (293)
T ss_dssp HHHHHHHHHHHHTSSSSCCSCHHHHHHHHH-------------HHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSC
T ss_pred HHHHHHHHhhhhcccccccccHHHHHhhhh-------------ccccchhhhhhhhhhhhccccchhhhhhhhhhccCCc
Confidence 000000000 00000001111100 0011111111111111110 0011223557899
Q ss_pred EEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccc
Q 005190 335 MLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 335 vLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
+++|+|++|.+++.+...+.+.+..+++++++++++||++++|+|+++++.|+ .|+|
T Consensus 237 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~--~Ffr 293 (293)
T d1ehya_ 237 VTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK--TAFR 293 (293)
T ss_dssp EEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHH--HHCC
T ss_pred eEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH--HhhC
Confidence 99999999999998863556777889999999999999999999999999999 5553
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.95 E-value=1.9e-27 Score=241.99 Aligned_cols=257 Identities=12% Similarity=0.092 Sum_probs=162.6
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~ 191 (709)
-++|.+.|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +.+++++|+.+++++
T Consensus 18 ~i~y~~~G~~--~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~l~~~l~~---- 91 (291)
T d1bn7a_ 18 RMHYVDVGPR--DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEA---- 91 (291)
T ss_dssp EEEEEEESCS--SSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHHHHHHHHHH----
T ss_pred EEEEEEeCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHHHHhhhhhh----
Confidence 5678888863 577899999999999999999999999999999999999999 689999999999988
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh-h-HHHhhchhhhHHhHHHhhhhhcCchhhh
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST-I-PLLELIPGQITTMLSSTLSLMTGDPLKM 269 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (709)
.+.++++|+||||||.+++.+|.++|+.++++|++++............ . ......... ........ ........
T Consensus 92 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~ 168 (291)
T d1bn7a_ 92 LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTA--DVGRELII-DQNAFIEG 168 (291)
T ss_dssp TTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTST--THHHHHHT-TSCHHHHT
T ss_pred hccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhh--hhHHHhhh-hhhhhHHh
Confidence 5567999999999999999999999999999999887554332221110 0 000000000 00000000 00000000
Q ss_pred HHHHHhhccCCchHHHHHHHhHHHh---hcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 270 AMDNVAKRLSLQPTIQDLSQDLVAL---SSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
......................... ...................... .......+.++++|+|+++|++|.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~P~lii~G~~D~~~ 244 (291)
T d1bn7a_ 169 VLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVAL----VEAYMNWLHQSPVPKLLFWGTPGVLI 244 (291)
T ss_dssp HHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHH----HHHHHHHHHHCCSCEEEEEEEECSSS
T ss_pred hhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhh----hhhhhhhhhcCCCCEEEEEeCCCCCc
Confidence 0000000000000000000000000 0000000000000000000000 11122345788999999999999999
Q ss_pred CcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 347 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 347 ~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 245 ~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 286 (291)
T d1bn7a_ 245 PPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARW 286 (291)
T ss_dssp CHHH-HHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHHHH
T ss_pred CHHH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 9997 99999999999999999999999999999999999955
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.95 E-value=1.1e-26 Score=234.08 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=155.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
-++|.+.|+ +|+|||+||+++++..|..+++.| .++|+|+++|+||||.| ++.++++|+.+++++
T Consensus 10 ~l~y~~~G~----g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~--- 82 (274)
T d1a8qa_ 10 EIFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTD--- 82 (274)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH---
T ss_pred EEEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHHHHHHHHH---
Confidence 456777776 678999999999999999999988 57899999999999999 778999999999988
Q ss_pred cCCCCCEEEEEechhHHHHHHHHHh-CCCceeEEEEecCCCCcchhhhhh----hhHHHhhchhhhH----HhHHHhhhh
Q 005190 191 RSPKRPVYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQS----TIPLLELIPGQIT----TMLSSTLSL 261 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~~A~~-~P~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~ 261 (709)
...++++++||||||.+++.+++. .|+++++++++++........... .......+..... .........
T Consensus 83 -l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (274)
T d1a8qa_ 83 -LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEG 161 (274)
T ss_dssp -TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhhhhhhh
Confidence 556789999999999999887665 589999999998754432211100 0011111000000 000000000
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-hhhHhhhhcccCCccEEEEee
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCS 340 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvi~G 340 (709)
..... ................. ............... ...+....+.++++|+++|+|
T Consensus 162 ~~~~~--------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 220 (274)
T d1a8qa_ 162 FFSAN--------RPGNKVTQGNKDAFWYM-------------AMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHG 220 (274)
T ss_dssp HTTTT--------STTCCCCHHHHHHHHHH-------------HTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEE
T ss_pred hhhcc--------ccchhhhhhHHHHHHHh-------------hhccchhhhhhHHHHhhccchHHHHHhccceeeeecc
Confidence 00000 00000000000000000 001111111111111 112233567889999999999
Q ss_pred CCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccc--cChhhHHHHHhhc
Q 005190 341 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL--EDGVDLVTIIKGA 389 (709)
Q Consensus 341 ~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~l--e~p~~~~~~I~~~ 389 (709)
++|.+++.+...+.+.+.+|++++++++++||++++ ++|+++++.|.+|
T Consensus 221 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~F 271 (274)
T d1a8qa_ 221 DDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEF 271 (274)
T ss_dssp TTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHH
Confidence 999999987535678888999999999999999887 5789999999843
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.95 E-value=8.5e-27 Score=234.70 Aligned_cols=243 Identities=14% Similarity=0.188 Sum_probs=159.5
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccH---HHHHHHhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGL---IRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~---~~~~~~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~ 187 (709)
.++|.+.|+ +|+|||+||++++...| ..+++.|+++|+|+++|+||||.| +.+++++++..++++
T Consensus 14 ~~~Y~~~G~----G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~ 89 (271)
T d1uk8a_ 14 LTNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDA 89 (271)
T ss_dssp EEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEee----CCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccccchhhhhhhhh
Confidence 578888887 67899999998877654 456788889999999999999998 457888888888877
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+||||||.+|+.+|.++|+.+.++|++++......... .........+.. . .............
T Consensus 90 ----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~- 161 (271)
T d1uk8a_ 90 ----LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE-GLNAVWGYTPSI-E-NMRNLLDIFAYDR- 161 (271)
T ss_dssp ----TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCH-HHHHHHTCCSCH-H-HHHHHHHHHCSCG-
T ss_pred ----hcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchh-hhhhhhhccchh-H-HHHHHHHHHhhhc-
Confidence 5668999999999999999999999999999999988654322211 111111111110 0 0001111110000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 347 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~ 347 (709)
...........+ ...........+..........+ .. ........+.++++|+|+|+|++|.+++
T Consensus 162 ---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~l~~i~~P~lii~G~~D~~~~ 226 (271)
T d1uk8a_ 162 ---------SLVTDELARLRY-EASIQPGFQESFSSMFPEPRQRW-ID----ALASSDEDIKTLPNETLIIHGREDQVVP 226 (271)
T ss_dssp ---------GGCCHHHHHHHH-HHHTSTTHHHHHHTTSCSSTHHH-HH----HHCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred ---------ccchhHHHHHHH-hhhhchhHHHHHHhhcchhhhhh-hh----hccccHHHHHhhccceeEEecCCCCCcC
Confidence 000000000000 00000000001111111111111 11 1112235578899999999999999999
Q ss_pred cHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 348 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.+. .+.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 227 ~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~F 267 (271)
T d1uk8a_ 227 LSS-SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEF 267 (271)
T ss_dssp HHH-HHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHHHH
T ss_pred HHH-HHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHH
Confidence 997 99999999999999999999999999999999999943
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.94 E-value=7.2e-27 Score=237.18 Aligned_cols=241 Identities=18% Similarity=0.160 Sum_probs=158.3
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHH----HhcCCceEEEEeCCCCCCC--------CHHHHHHHHHHHH
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQ----RLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTV 185 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~----~L~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l 185 (709)
..++|.+.|+ +|+|||+||++++...|..+.. .+.++|+|+++|+||||.| +...+++|+.+++
T Consensus 20 ~~i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li 95 (283)
T d2rhwa1 20 FNIHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM 95 (283)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC----CCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhccccc
Confidence 3577888886 6889999999999999877543 3468999999999999998 3356678888888
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhh----hhHHHhhchhhhHHhHHHhhhh
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS----TIPLLELIPGQITTMLSSTLSL 261 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 261 (709)
++ .+.++++++||||||.+|+.+|.++|+.++++|+++|........... ...................+..
T Consensus 96 ~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (283)
T d2rhwa1 96 DA----LDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQV 171 (283)
T ss_dssp HH----HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred cc----ccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 87 446789999999999999999999999999999999854322211100 0000010000000001111111
Q ss_pred hcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHH-HHHHHHH--hhhHhhhhcccCCccEEEE
Q 005190 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLW-KIELLKA--ASAYANSRLHAVKAQMLVL 338 (709)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~l~~i~~PvLvi 338 (709)
.... ......+........... ....... ....... ........+.++++|++++
T Consensus 172 ~~~~----------~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 229 (283)
T d2rhwa1 172 FLYD----------QSLITEELLQGRWEAIQR------------QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFIT 229 (283)
T ss_dssp HCSC----------GGGCCHHHHHHHHHHHHH------------CHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEE
T ss_pred hhcc----------cccCcHHHHHHHHHHhhh------------hhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEE
Confidence 1000 000111111111111110 0000110 1111110 1122345678899999999
Q ss_pred eeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 339 CSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 339 ~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+|++|.+++++. ++.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 230 ~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~F 279 (283)
T d2rhwa1 230 WGRDDRFVPLDH-GLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDF 279 (283)
T ss_dssp EETTCSSSCTHH-HHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHH
T ss_pred EeCCCCCcCHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 999999999997 89999999999999999999999999999999999944
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.94 E-value=5.7e-27 Score=236.87 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=157.6
Q ss_pred CCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHH
Q 005190 116 PPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRS 187 (709)
Q Consensus 116 ~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~ 187 (709)
.+.-++|.+.|+ +|+|||+||+++++..|..++..| .++|+|+++|+||||.| +++++++|+.+++++
T Consensus 11 ~~v~i~y~~~G~----g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~ 86 (279)
T d1hkha_ 11 TPIELYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLET 86 (279)
T ss_dssp EEEEEEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhh
Confidence 344667888886 678999999999999999999877 78999999999999999 789999999999988
Q ss_pred hhccCCCCCEEEEEechhH-HHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh----HHHhhchhhhHHhHHHhhhhh
Q 005190 188 ESNRSPKRPVYLVGESLGA-CIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI----PLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG-~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 262 (709)
.+.++++|+|||||| .++..+|..+|++|.++|++++..+.......... .....+...........+...
T Consensus 87 ----l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (279)
T d1hkha_ 87 ----LDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDF 162 (279)
T ss_dssp ----HTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ----cCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhh
Confidence 345789999999996 66666777889999999999876543222111100 000000000000000000000
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
.... ........... ............. .......+......... .....+.+..+++|+++++|++
T Consensus 163 ~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~G~~ 229 (279)
T d1hkha_ 163 YKNF-YNLDENLGSRI-SEQAVTGSWNVAI----------GSAPVAAYAVVPAWIED-FRSDVEAVRAAGKPTLILHGTK 229 (279)
T ss_dssp HHHH-HTHHHHBTTTB-CHHHHHHHHHHHH----------TSCTTHHHHTHHHHTCB-CHHHHHHHHHHCCCEEEEEETT
T ss_pred hhhh-cccchhhhhhh-hhhhhhhhhhhhc----------ccchhhhhhhhhhhhcc-cccchhhhcccCCceEEEEcCC
Confidence 0000 00000000000 0000111000000 00011111100000000 0111234567899999999999
Q ss_pred CCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 343 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|.+++.+...+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 230 D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 276 (279)
T d1hkha_ 230 DNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTF 276 (279)
T ss_dssp CSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 99998764377888899999999999999999999999999999944
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.94 E-value=1.7e-26 Score=232.56 Aligned_cols=249 Identities=13% Similarity=0.074 Sum_probs=158.7
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~ 189 (709)
..++|.+.|++ ++|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.++++++
T Consensus 9 ~~l~y~~~G~~--~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l- 85 (275)
T d1a88a_ 9 TNIFYKDWGPR--DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEAL- 85 (275)
T ss_dssp CEEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH-
T ss_pred CEEEEEEecCC--CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccccccccccccccccc-
Confidence 35677787863 5788999999999999999999988 68899999999999998 6799999999999984
Q ss_pred ccCCCCCEEEEEech-hHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh----hHHHhhchhhhHHhHHHhhhhhcC
Q 005190 190 NRSPKRPVYLVGESL-GACIALAVAARNPDIDLVLILVNPATSFNKSVLQST----IPLLELIPGQITTMLSSTLSLMTG 264 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~-GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 264 (709)
+.++++++|||+ ||.+++.+|..+|++|+++|++++..+......... ........................
T Consensus 86 ---~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (275)
T d1a88a_ 86 ---DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPS 162 (275)
T ss_dssp ---TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ---cccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhh
Confidence 456789999987 666777788999999999999987544322211110 011111100000000000000000
Q ss_pred chhhhHHHHHhhccCCc-hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-hhhHhhhhcccCCccEEEEeeCC
Q 005190 265 DPLKMAMDNVAKRLSLQ-PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 265 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
..... ......... ............ .... ........ ........+.++++|+|+++|++
T Consensus 163 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~ 225 (275)
T d1a88a_ 163 GPFYG---FNREGATVSQGLIDHWWLQGMM-----------GAAN---AHYECIAAFSETDFTDDLKRIDVPVLVAHGTD 225 (275)
T ss_dssp TTTTT---TTSTTCCCCHHHHHHHHHHHHH-----------SCHH---HHHHHHHHHHHCCCHHHHHHCCSCEEEEEETT
T ss_pred hhhhh---cccchhhHHHHHHHHHHHhhcc-----------cchH---HHHHHHHHhhhhhhhHHHHhhccccceeecCC
Confidence 00000 000000000 001111000000 0011 11111111 11222355678999999999999
Q ss_pred CCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 343 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
|.+++.+...+.+.+.+|++++++++++||++++|+|+++++.|.+|
T Consensus 226 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~F 272 (275)
T d1a88a_ 226 DQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAF 272 (275)
T ss_dssp CSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 99998865367788889999999999999999999999999999954
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.7e-26 Score=238.74 Aligned_cols=251 Identities=13% Similarity=0.131 Sum_probs=161.4
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
.++|.+.|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++++.+++++
T Consensus 23 ~i~y~~~G~----gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~i~~l~~~- 97 (322)
T d1zd3a2 23 RLHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK- 97 (322)
T ss_dssp EEEEEEECC----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHHHHHHHHHHHH-
T ss_pred EEEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccccccccccchhhhhhhhc-
Confidence 578888886 6899999999999999999999995 6899999999999998 568889999999988
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHH----------HhhchhhhHH----h
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPL----------LELIPGQITT----M 254 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~----------~~~~~~~~~~----~ 254 (709)
.+.++++++||||||.+++.+|.++|+++.++|++++............... ....+..... .
T Consensus 98 ---l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
T d1zd3a2 98 ---LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQN 174 (322)
T ss_dssp ---HTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHHHT
T ss_pred ---ccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhccchhhhhhhhh
Confidence 4567899999999999999999999999999999987543222111111000 0000000000 0
Q ss_pred HHHhhhhhcCch----hhh--HHHHHh---hc--------cCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHH--
Q 005190 255 LSSTLSLMTGDP----LKM--AMDNVA---KR--------LSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIE-- 315 (709)
Q Consensus 255 ~~~~~~~~~~~~----~~~--~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 315 (709)
....+....... ... ...... .. .............. ....+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 240 (322)
T d1zd3a2 175 LSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQF--------------KKSGFRGPLNWY 240 (322)
T ss_dssp HHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHH--------------HHHTTHHHHHTT
T ss_pred HHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHH--------------hhcccccccccc
Confidence 000010000000 000 000000 00 00000000000000 0000000000
Q ss_pred --HHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccc
Q 005190 316 --LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 316 --~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
..............++++|+|+|+|++|.+++++. .+.+.+.++++++++++++||++++|+|+++++.|. .|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~FL~ 317 (322)
T d1zd3a2 241 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI--KWLD 317 (322)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred cccccccccchhhhcccCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHh
Confidence 00011112234557899999999999999999997 889999999999999999999999999999999999 4454
Q ss_pred c
Q 005190 394 R 394 (709)
Q Consensus 394 r 394 (709)
.
T Consensus 318 ~ 318 (322)
T d1zd3a2 318 S 318 (322)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=4e-26 Score=235.24 Aligned_cols=253 Identities=13% Similarity=0.078 Sum_probs=160.5
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHH
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRS 187 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~ 187 (709)
..++|.+.|+ .++.|+|||+||+++++..|..+...|. ++|+|+++|+||||.| +++++++|+.+++++
T Consensus 34 ~~~~y~~~G~-~~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~ 112 (310)
T d1b6ga_ 34 LRAHYLDEGN-SDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIER 112 (310)
T ss_dssp CEEEEEEEEC-TTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEecC-CCCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCccccccccccccccccccccchhhhhhh
Confidence 3567888886 3457789999999999999999999885 7899999999999999 678999999999987
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+.++++|+||||||.+|+.+|.++|++|+++|++++..............+.......... .............
T Consensus 113 ----l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 187 (310)
T d1b6ga_ 113 ----LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTA-WKYDLVTPSDLRL 187 (310)
T ss_dssp ----HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHH-HHHHHHSCSSCCH
T ss_pred ----ccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhh-hhhhhccchhhhh
Confidence 45679999999999999999999999999999999986543322221111111111111000 0000000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHH--------HHHHHhhhHhhhhcccCCccEEEEe
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKI--------ELLKAASAYANSRLHAVKAQMLVLC 339 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~i~~PvLvi~ 339 (709)
............. ......... +.+........... ................+++|+++++
T Consensus 188 ~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (310)
T d1b6ga_ 188 DQFMKRWAPTLTE-AEASAYAAP----------FPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAI 256 (310)
T ss_dssp HHHHHHHSTTCCH-HHHHHHHTT----------CSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hhhhhccCccccH-HHHHHHHhh----------cchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEE
Confidence 0000000000000 000000000 00000000000000 0000001111233467899999999
Q ss_pred eCCCCCCCcHHHHHHHHhhcCCc-EEEEEcCCCccccccChhhHHHHHhh
Q 005190 340 SGKDQLMPSQEEGERLSSALHKC-EPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 340 G~~D~~v~~~~~~~~l~~~~~~~-~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
|++|.+++++. .+.+.+..++. ++++++++||++++|+|+.++++|++
T Consensus 257 G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~ 305 (310)
T d1b6ga_ 257 GMKDKLLGPDV-MYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKH 305 (310)
T ss_dssp ETTCSSSSHHH-HHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHH
T ss_pred eCCCCCCCHHH-HHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHH
Confidence 99999999996 88999988875 78899999999999999999999994
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.94 E-value=3.3e-26 Score=231.84 Aligned_cols=259 Identities=15% Similarity=0.136 Sum_probs=155.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhh
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~ 189 (709)
.++|...|++ +++|+|||+||++++...|...+..+ +++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 13 ~i~y~~~g~~-~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ll~~l~ 91 (290)
T d1mtza_ 13 YIYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF 91 (290)
T ss_dssp EEEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCC-CCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhhhhhhhhcccc
Confidence 4567777763 35678999999988888877766666 67899999999999999 66889999999988742
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhh-hhcCchhh
Q 005190 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS-LMTGDPLK 268 (709)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 268 (709)
+.++++|+||||||.+|+.+|.++|++|+++|++++........ ....................... ........
T Consensus 92 ---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (290)
T d1mtza_ 92 ---GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV-KEMNRLIDELPAKYRDAIKKYGSSGSYENPEY 167 (290)
T ss_dssp ---TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH-HHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHH
T ss_pred ---cccccceecccccchhhhhhhhcChhhheeeeecccccCcccch-hhhhhhhhhhhHHHHHHHHHhhhhccccchhH
Confidence 35789999999999999999999999999999998865432211 11111111111111111111100 00000100
Q ss_pred h-HHHHH--hhccCCchHHHHHHHhHHHhh-cchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCC
Q 005190 269 M-AMDNV--AKRLSLQPTIQDLSQDLVALS-SYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 269 ~-~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
. ..... ..................... ............... ............+.++++|+++++|++|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~P~l~i~G~~D~ 242 (290)
T d1mtza_ 168 QEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTI-----TGTIKDWDITDKISAIKIPTLITVGEYDE 242 (290)
T ss_dssp HHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBC-----CSTTTTCBCTTTGGGCCSCEEEEEETTCS
T ss_pred HHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhH-----hhhhhcccHHHHhhcccceEEEEEeCCCC
Confidence 0 00000 000000000000000000000 000000000000000 00000011234567889999999999998
Q ss_pred CCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 345 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 345 ~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++ +. ++.+.+.++++++++++++||++++|+|+++++.|.+|
T Consensus 243 ~~~-~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~F 285 (290)
T d1mtza_ 243 VTP-NV-ARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDF 285 (290)
T ss_dssp SCH-HH-HHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred CCH-HH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 765 54 78899999999999999999999999999999999943
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=2.2e-25 Score=223.43 Aligned_cols=246 Identities=13% Similarity=0.116 Sum_probs=155.3
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
-++|.+.|+ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++++.+++++
T Consensus 10 ~l~y~~~G~----g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~--- 82 (271)
T d1va4a_ 10 QIYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEH--- 82 (271)
T ss_dssp EEEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH---
T ss_pred EEEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccceeeeee---
Confidence 456777776 6789999999999999999999995 6899999999999998 779999999999888
Q ss_pred cCCCCCEEEEEechhHHHHH-HHHHhCCCceeEEEEecCCCCcchhhhhhh----hHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 191 RSPKRPVYLVGESLGACIAL-AVAARNPDIDLVLILVNPATSFNKSVLQST----IPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl-~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
.+.++++++|||+||.+++ .+|..+|+++.+++++++............ .......................
T Consensus 83 -~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (271)
T d1va4a_ 83 -LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFN-- 159 (271)
T ss_dssp -HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred -cCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhhhhc--
Confidence 4467899999999887664 556778999999999987654322211000 00010000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHH-hhhHhhhhcccCCccEEEEeeCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCSGKDQ 344 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvi~G~~D~ 344 (709)
........................ ...........+.. ........+.++++|+++++|++|.
T Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 223 (271)
T d1va4a_ 160 ---APFYGINKGQVVSQGVQTQTLQIA-------------LLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp ---HHHHTGGGTCCCCHHHHHHHHHHH-------------HHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCS
T ss_pred ---chhhcccchhhhhhhHHHHHHhhh-------------hhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCC
Confidence 000000000000011100000000 00011111111111 1122235677899999999999999
Q ss_pred CCCcHHHHHH-HHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccc
Q 005190 345 LMPSQEEGER-LSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 345 ~v~~~~~~~~-l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
+++.+. ..+ +.+..+++++++++++||++++|+|+++++.|. +|++
T Consensus 224 ~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fL~ 270 (271)
T d1va4a_ 224 IVPFET-TGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL--AFLK 270 (271)
T ss_dssp SSCGGG-THHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHT
T ss_pred CCCHHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHC
Confidence 999886 544 456789999999999999999999999999999 4444
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.93 E-value=3.9e-25 Score=228.46 Aligned_cols=259 Identities=14% Similarity=0.033 Sum_probs=155.1
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
..++|.+.|+| ++|+|||+||++++...|......+.++|+|+++|+||||.| +.+++++|+.+++++
T Consensus 22 ~~i~y~~~G~~--~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~~~~~- 98 (313)
T d1azwa_ 22 HTLYFEQCGNP--HGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTH- 98 (313)
T ss_dssp CEEEEEEEECT--TSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHH-
T ss_pred cEEEEEEecCC--CCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCccccccchhHHHHHHHHHHHHHh-
Confidence 35678888864 578899999999999899877666678999999999999999 578999999999998
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhh
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (709)
++.++++|+||||||.+++.+|.++|++++++|++++..................+ ..................
T Consensus 99 ---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 172 (313)
T d1azwa_ 99 ---LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRL---FPDAWEHYLNAIPPVERA 172 (313)
T ss_dssp ---TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHH---CHHHHHHHHHTSCGGGTT
T ss_pred ---hccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchh---hhHHHHHHHHhhhhhhhh
Confidence 56788999999999999999999999999999999986654322111000000000 000000110000000000
Q ss_pred hHHHHHhhc-cCCchHH-HHH----HHhHHHhh--cchhhhhhcCChhhHHHHHHHHHH----h-------hhHhhhhcc
Q 005190 269 MAMDNVAKR-LSLQPTI-QDL----SQDLVALS--SYLPVLADILPKETLLWKIELLKA----A-------SAYANSRLH 329 (709)
Q Consensus 269 ~~~~~~~~~-~~~~~~~-~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~l~ 329 (709)
......... ....... ... ........ ........................ . .........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
T d1azwa_ 173 DLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHR 252 (313)
T ss_dssp SHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGG
T ss_pred hhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccchhhhHhhhh
Confidence 000000000 0000000 000 00000000 000000000000000000000000 0 011223456
Q ss_pred cCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 330 AVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 330 ~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
.+++|+++|+|++|.++|++. +..+.+.+|++++++++++||+++ +|+.+.++|+.
T Consensus 253 ~~~~P~lii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~~--ep~~~~~li~a 308 (313)
T d1azwa_ 253 IADIPGVIVHGRYDVVCPLQS-AWDLHKAWPKAQLQISPASGHSAF--EPENVDALVRA 308 (313)
T ss_dssp GTTCCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSSTT--SHHHHHHHHHH
T ss_pred cCCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCCC--CchHHHHHHHH
Confidence 688999999999999999997 999999999999999999999976 47766666653
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=2.6e-25 Score=223.62 Aligned_cols=247 Identities=13% Similarity=0.033 Sum_probs=154.4
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
-++|.+.|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.+++++
T Consensus 10 ~i~y~~~G~----g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~--- 82 (273)
T d1a8sa_ 10 QIYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEH--- 82 (273)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHH---
T ss_pred EEEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHHHHHHHHHh---
Confidence 467778886 678999999999999999999999 57899999999999998 789999999999988
Q ss_pred cCCCCCEEEEEechhHHHHHH-HHHhCCCceeEEEEecCCCCcchhhhhh----hhHHHhhchhhhHHhHHHhhhhhcCc
Q 005190 191 RSPKRPVYLVGESLGACIALA-VAARNPDIDLVLILVNPATSFNKSVLQS----TIPLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 191 ~~~~~~v~LvGhS~GG~iAl~-~A~~~P~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
.+..+.+++|||+||.+++. +|..+|+++.+++++++........... ....+.....................
T Consensus 83 -l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T d1a8sa_ 83 -LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASG 161 (273)
T ss_dssp -TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -cCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 45678999999998865555 5556799999999998765432221110 00111110000000000000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
..... ............+........ ............. ........+.++++|+++|+|++|.+
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvlii~g~~D~~ 226 (273)
T d1a8sa_ 162 PFFGF--NQPGAKSSAGMVDWFWLQGMA-----------AGHKNAYDCIKAF--SETDFTEDLKKIDVPTLVVHGDADQV 226 (273)
T ss_dssp TSSST--TSTTCCCCHHHHHHHHHHHHH-----------SCHHHHHHHHHHH--HHCCCHHHHHTCCSCEEEEEETTCSS
T ss_pred hhhhc--ccchhhhhHHHHHHHHHhhcc-----------cchhhhhhhHHHh--hhhhhhHHHHhhccceEEEecCCCCC
Confidence 00000 000000000111111110000 0111111111111 11223356788999999999999999
Q ss_pred CCcHHHHHHHH-hhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLS-SALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~-~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++.+. .+.+. +..+++++++++++||++++|+|+++++.|.+|
T Consensus 227 ~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~F 270 (273)
T d1a8sa_ 227 VPIEA-SGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAF 270 (273)
T ss_dssp SCSTT-THHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 99886 55554 567899999999999999999999999999843
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.93 E-value=1.2e-25 Score=222.42 Aligned_cols=239 Identities=12% Similarity=0.061 Sum_probs=148.9
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
+++|||+||+++++..|..+++.|+ +||+|+++|+||||.| +.++++.++..+++. .....+++++||
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvgh 78 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMES---LSADEKVILVGH 78 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHT---SCSSSCEEEEEE
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhc---cccccccccccc
Confidence 5679999999999999999999996 6799999999999999 556777777777665 344568999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHH----hhhhhcCchhhhHHHHHhhcc
Q 005190 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS----TLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 278 (709)
||||.+++.++.++|+.+.++|++++............................. .....................
T Consensus 79 S~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (258)
T d1xkla_ 79 SLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKL 158 (258)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHT
T ss_pred chhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHh
Confidence 9999999999999999999999998865433222111111010000000000000 000000000000000000000
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
............... ........ ..+ ........+..+++|+++|+|++|.+++++. .+.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~----------~~~~~~~~---~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~ 222 (258)
T d1xkla_ 159 YQLCSPEDLALASSL----------VRPSSLFM---EDL--SKAKYFTDERFGSVKRVYIVCTEDKGIPEEF-QRWQIDN 222 (258)
T ss_dssp STTSCHHHHHHHHHH----------CCCBCCCH---HHH--HHCCCCCTTTGGGSCEEEEEETTCTTTTHHH-HHHHHHH
T ss_pred hhcccHHHHHHhhhh----------hhhhhhhh---hhh--hhhhhcccccccccceeEeeecCCCCCCHHH-HHHHHHH
Confidence 000000000000000 00000000 000 0111123456678999999999999999996 9999999
Q ss_pred cCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 359 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 359 ~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++++||++++|+|+++++.|.+.
T Consensus 223 ~~~~~~~~i~~~gH~~~~e~P~~~~~~l~e~ 253 (258)
T d1xkla_ 223 IGVTEAIEIKGADHMAMLCEPQKLCASLLEI 253 (258)
T ss_dssp HCCSEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 9999999999999999999999999999953
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.92 E-value=2.7e-25 Score=220.36 Aligned_cols=233 Identities=14% Similarity=0.087 Sum_probs=147.0
Q ss_pred EEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 135 LLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 135 Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
.||+||+++++..|..+++.|+ ++|+|+++|+||||.| +++++++++.++++.. ...++++|+|||||
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~lvGhS~G 81 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL---PPGEKVILVGESCG 81 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHS---CTTCCEEEEEETTH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhh---ccccceeecccchH
Confidence 6899999999999999999995 6799999999999998 6688888888887662 34678999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhH-HHhhchhhhHHhHHHhh---hhhcCchhhhHHHHHhhccC-C
Q 005190 206 ACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP-LLELIPGQITTMLSSTL---SLMTGDPLKMAMDNVAKRLS-L 280 (709)
Q Consensus 206 G~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~ 280 (709)
|.+++.+|..+|++++++|++++.............. ................. .......... ........ .
T Consensus 82 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 159 (256)
T d3c70a1 82 GLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGF--TLLRENLYTL 159 (256)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCH--HHHHHHTSTT
T ss_pred HHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhh--hhhhhhhhhh
Confidence 9999999999999999999998755433222111110 11100000000000000 0000000000 00000000 0
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
............. ....... ... ...........+++|+++|+|++|.+++++. .+.+.+.+|
T Consensus 160 ~~~~~~~~~~~~~-----------~~~~~~~---~~~--~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~p 222 (256)
T d3c70a1 160 CGPEEYELAKMLT-----------RKGSLFQ---NIL--AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEF-QLWQIENYK 222 (256)
T ss_dssp SCHHHHHHHHHHC-----------CCBCCCH---HHH--TTSCCCCTTTGGGSCEEEEECTTCSSSCHHH-HHHHHHHSC
T ss_pred cchhhHHHhhhhh-----------hhhhHHH---hhh--hhcchhhhhhccccceeEEeecCCCCCCHHH-HHHHHHHCC
Confidence 0000000000000 0000000 000 0011112334568999999999999999996 899999999
Q ss_pred CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
++++++++++||++++|+|+++++.|.+.
T Consensus 223 ~~~~~~i~~agH~~~~e~P~~~~~~l~~~ 251 (256)
T d3c70a1 223 PDKVYKVEGGDHKLQLTKTKEIAEILQEV 251 (256)
T ss_dssp CSEEEECCSCCSCHHHHSHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 99999999999999999999999999954
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.92 E-value=4.4e-25 Score=223.87 Aligned_cols=257 Identities=11% Similarity=0.050 Sum_probs=149.8
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCC-----------HHHHHHHHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS-----------FTGLVKLVESTVRS 187 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss-----------~~~~~~dl~~~l~~ 187 (709)
.++|.+.|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ ..+..+++..++..
T Consensus 19 ~i~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (298)
T d1mj5a_ 19 RMAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEA 94 (298)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEEcC----CCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccchhhhhhcccccc
Confidence 567888886 688999999999999999999999999999999999999991 23334444444333
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh--HHHhhchhhhHHhHHHhhhhhcCc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--PLLELIPGQITTMLSSTLSLMTGD 265 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 265 (709)
....++++++||||||.+++.+|.++|+.|.+++++++............. ........... .........
T Consensus 95 ---~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 167 (298)
T d1mj5a_ 95 ---LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAG----EELVLQDNV 167 (298)
T ss_dssp ---TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTH----HHHHTTTCH
T ss_pred ---ccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhh----hhhhhhhhh
Confidence 355678999999999999999999999999999999875543222211100 00000000000 000000000
Q ss_pred hhhhHHHHHhhccCCchHHHHHHHhHHHhh----cchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeC
Q 005190 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVALS----SYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG 341 (709)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~ 341 (709)
.............................. ................ ............+..+++|+++++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~g~ 243 (298)
T d1mj5a_ 168 FVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA----DVVAIARDYAGWLSESPIPKLFINAE 243 (298)
T ss_dssp HHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH----HHHHHHHHHHHHHTTCCSCEEEEEEE
T ss_pred hhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhh----hhhhhhhhhhhhhhhcceeEEEEecC
Confidence 000000000000000000000000000000 0000000000000000 00011122235567889999999999
Q ss_pred CCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhccccccc
Q 005190 342 KDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 395 (709)
Q Consensus 342 ~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~r~ 395 (709)
+|.+.+.. .+.+.+.+|+++++++ ++||++++|+|+++++.|. .|+++-
T Consensus 244 ~d~~~~~~--~~~~~~~~p~~~~~~~-~~GH~~~~e~P~~v~~~i~--~fl~~~ 292 (298)
T d1mj5a_ 244 PGALTTGR--MRDFCRTWPNQTEITV-AGAHFIQEDSPDEIGAAIA--AFVRRL 292 (298)
T ss_dssp ECSSSSHH--HHHHHTTCSSEEEEEE-EESSCGGGTCHHHHHHHHH--HHHHHH
T ss_pred CCCcChHH--HHHHHHHCCCCEEEEe-CCCCchHHhCHHHHHHHHH--HHHhhh
Confidence 99877644 6788899999887766 5799999999999999999 556553
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.92 E-value=4.8e-24 Score=217.55 Aligned_cols=260 Identities=13% Similarity=0.031 Sum_probs=156.4
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~ 188 (709)
..++|.+.|+| ++|+|||+||+++++..|..+...|+++|+|+++|+||||.| +..++.+|+..++++
T Consensus 22 ~~i~y~~~G~~--~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~d~~~~~~~- 98 (313)
T d1wm1a_ 22 HRIYWELSGNP--NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREM- 98 (313)
T ss_dssp CEEEEEEEECT--TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHH-
T ss_pred cEEEEEEecCC--CCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccccccccchhhHHHHHHhhhhc-
Confidence 35678888874 578899999999999999999888889999999999999999 457888888888877
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch-h
Q 005190 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP-L 267 (709)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 267 (709)
.+..+++++|||+||.+++.+|..+|+.+.+++++++....................... ............ .
T Consensus 99 ---~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 172 (313)
T d1wm1a_ 99 ---AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEK---WERVLSILSDDERK 172 (313)
T ss_dssp ---TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHH---HHHHHTTSCTTGGG
T ss_pred ---cCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhh---hhhhhhhhhhhhhh
Confidence 667899999999999999999999999999999998865432221110000000000000 000000000000 0
Q ss_pred hhHHHHH-hhccCCchHHHHHHHhHHHhh----cc--hhhhhhcCChhhHHHHHHHH----H------HhhhHhhhhccc
Q 005190 268 KMAMDNV-AKRLSLQPTIQDLSQDLVALS----SY--LPVLADILPKETLLWKIELL----K------AASAYANSRLHA 330 (709)
Q Consensus 268 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~l~~ 330 (709)
....... ..................... .. .................... . .........+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (313)
T d1wm1a_ 173 DVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLI 252 (313)
T ss_dssp CHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGG
T ss_pred hhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchhhhhhhhhh
Confidence 0000000 000000000000000000000 00 00000000000000000000 0 000112245566
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 331 VKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 331 i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+++|+++|+|++|.+++++. ++.+++.+|++++++++++||++ ++|+.++++|+..
T Consensus 253 ~~~Pvlii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~--~eP~~~~~lv~a~ 308 (313)
T d1wm1a_ 253 RHIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSY--DEPGILHQLMIAT 308 (313)
T ss_dssp TTSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSST--TSHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCccCHHH-HHHHHHHCCCCEEEEECCCCCCc--CCchHHHHHHHHH
Confidence 89999999999999999997 99999999999999999999964 4688888877654
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=8.1e-25 Score=211.86 Aligned_cols=165 Identities=15% Similarity=0.128 Sum_probs=133.5
Q ss_pred CCCEEEEeCCCCCCcccHHHH--HHHhc-CCceEEEEeCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQ--HQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~--~~~L~-~~~~Vi~~Dl~G~G~S---------s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
++|+|||+||++++...|... ++.|+ ++|+|+++|+||||.| +..+..+++.++++. .+..+++
T Consensus 30 ~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~----l~~~~~~ 105 (208)
T d1imja_ 30 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDA----LELGPPV 105 (208)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHH----HTCCSCE
T ss_pred CCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccchhhhhhhhhhcccc----ccccccc
Confidence 577899999999999999874 57774 6899999999999988 224455667777776 4457899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
|+||||||.+|+.+|.++|++++++|+++|.....
T Consensus 106 lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~--------------------------------------------- 140 (208)
T d1imja_ 106 VISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--------------------------------------------- 140 (208)
T ss_dssp EEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG---------------------------------------------
T ss_pred ccccCcHHHHHHHHHHHhhhhcceeeecCcccccc---------------------------------------------
Confidence 99999999999999999999999999998732100
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
+. ...+.++++|+|+|+|++|.+++.+. +..+.
T Consensus 141 --------------------------~~------------------~~~~~~i~~P~Lii~G~~D~~~~~~~---~~~~~ 173 (208)
T d1imja_ 141 --------------------------IN------------------AANYASVKTPALIVYGDQDPMGQTSF---EHLKQ 173 (208)
T ss_dssp --------------------------SC------------------HHHHHTCCSCEEEEEETTCHHHHHHH---HHHTT
T ss_pred --------------------------cc------------------cccccccccccccccCCcCcCCcHHH---HHHHh
Confidence 00 01235688999999999999887552 44567
Q ss_pred cCCcEEEEEcCCCccccccChhhHHHHHhhccccc
Q 005190 359 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 359 ~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
++++++.+++++||.+++|+|+++.+.|. +|++
T Consensus 174 ~~~~~~~~i~~~gH~~~~~~p~~~~~~l~--~Fl~ 206 (208)
T d1imja_ 174 LPNHRVLIMKGAGHPCYLDKPEEWHTGLL--DFLQ 206 (208)
T ss_dssp SSSEEEEEETTCCTTHHHHCHHHHHHHHH--HHHH
T ss_pred CCCCeEEEECCCCCchhhhCHHHHHHHHH--HHHh
Confidence 89999999999999999999999999999 4543
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.90 E-value=3.1e-23 Score=205.62 Aligned_cols=240 Identities=17% Similarity=0.141 Sum_probs=135.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCCH------HHHHHHHHHHHHHhhcc
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSF------TGLVKLVESTVRSESNR 191 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss~------~~~~~dl~~~l~~~~~~ 191 (709)
.++|...++ ++|+|||+||++++...|..+++.|+ .+|+|+++|+||||.|+. .....+..... ....
T Consensus 6 ~lh~~~~~~---~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~--~~~~ 80 (264)
T d1r3da_ 6 QLHFAKPTA---RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTV--QAHV 80 (264)
T ss_dssp EEESSCCBT---TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHH--HTTC
T ss_pred eEEEcCCCC---CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhcc--cccc
Confidence 345555443 67899999999999999999999996 689999999999999921 12222222111 1223
Q ss_pred CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhh-hhhHHHhhch---hhhHH-hHHHhhhhhcCch
Q 005190 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ-STIPLLELIP---GQITT-MLSSTLSLMTGDP 266 (709)
Q Consensus 192 ~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~-~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~ 266 (709)
....+++++||||||.+|+.+|.++|+.+.+++++.+.......... .......... ..... .............
T Consensus 81 ~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T d1r3da_ 81 TSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQA 160 (264)
T ss_dssp CTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSG
T ss_pred cccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 45678999999999999999999999998888876543322111110 0000000000 00000 0000000000000
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH-HhhhHhhhhcccCCccEEEEeeCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQL 345 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLvi~G~~D~~ 345 (709)
.... .............. ............... .........+..+++|+++|+|++|..
T Consensus 161 -------~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~ 221 (264)
T d1r3da_ 161 -------VFSS-LNHEQRQTLIAQRS-----------ANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSK 221 (264)
T ss_dssp -------GGTT-CCHHHHHHHHHHHT-----------TSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHH
T ss_pred -------hhcc-cchHHHHHHHHHHh-----------hhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHH
Confidence 0000 00000011100000 000001110000000 001112345678899999999999953
Q ss_pred CCcHHHHHHHHhhcCCcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 346 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 346 v~~~~~~~~l~~~~~~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
+ ..+.+ .+++++++++++||++++|+|+++++.|.+|
T Consensus 222 ~------~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~~f 258 (264)
T d1r3da_ 222 F------QQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQAM 258 (264)
T ss_dssp H------HHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHHHH
T ss_pred H------HHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHHHH
Confidence 2 33333 3589999999999999999999999999943
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.89 E-value=1.1e-21 Score=191.46 Aligned_cols=215 Identities=14% Similarity=0.099 Sum_probs=139.6
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+++|||+||++++...|..+++.|+ +||+|+++|+||||.| ...+..+++..++..+... ..++++|+|||
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 89 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 89 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhc-ccCceEEEEcc
Confidence 5679999999999999999999995 6899999999999998 4455666666665554333 35789999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchH
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (709)
|||.+++.++.++|... +++++++........ ........ ............ ..
T Consensus 90 ~Gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~---------------~~ 143 (242)
T d1tqha_ 90 LGGVFSLKLGYTVPIEG--IVTMCAPMYIKSEET-MYEGVLEY--------AREYKKREGKSE---------------EQ 143 (242)
T ss_dssp HHHHHHHHHHTTSCCSC--EEEESCCSSCCCHHH-HHHHHHHH--------HHHHHHHHTCCH---------------HH
T ss_pred hHHHHhhhhcccCcccc--cccccccccccchhH-HHHHHHHH--------HHHHhhhccchh---------------hh
Confidence 99999999999998765 455555443322111 00000000 000000000000 00
Q ss_pred HHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc--CC
Q 005190 284 IQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL--HK 361 (709)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~--~~ 361 (709)
......... . ........... ........+..+++|+|+++|++|.+++++. ++.+.+.+ ++
T Consensus 144 ~~~~~~~~~----------~-~~~~~~~~~~~----~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~-~~~~~~~~~~~~ 207 (242)
T d1tqha_ 144 IEQEMEKFK----------Q-TPMKTLKALQE----LIADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPV 207 (242)
T ss_dssp HHHHHHHHT----------T-SCCTTHHHHHH----HHHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHCCCSS
T ss_pred HHHHHhhhh----------h-hccchhhcccc----cccccccccceeccccceeecccCCccCHHH-HHHHHHHcCCCC
Confidence 000000000 0 00011110110 1112235668899999999999999999997 88988876 57
Q ss_pred cEEEEEcCCCcccccc-ChhhHHHHHhhc
Q 005190 362 CEPRNFYGHGHFLLLE-DGVDLVTIIKGA 389 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le-~p~~~~~~I~~~ 389 (709)
+++++++++||++++| +++++++.|.+|
T Consensus 208 ~~~~~~~~~gH~~~~~~~~~~~~~~i~~F 236 (242)
T d1tqha_ 208 KQIKWYEQSGHVITLDQEKDQLHEDIYAF 236 (242)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHHHH
T ss_pred cEEEEECCCCCcCccccCHHHHHHHHHHH
Confidence 8999999999999987 589999999844
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.88 E-value=3.4e-22 Score=213.27 Aligned_cols=172 Identities=9% Similarity=0.036 Sum_probs=123.4
Q ss_pred cCCCcccccccccchhhhhhHHHHHhhhhcccc--ccccccCCC----CcHhhHHHH-------HHHh-----hcccCCC
Q 005190 53 TETTPTRIFVEKKSSELVEDEAETKQRVNVREY--SEEESEGNG----KSLKDYFDE-------AEDM-----IKSSSGG 114 (709)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~-------~~~~-----~~~~~~g 114 (709)
.+..|++..+++...+.++.+++..+-.....+ ...|+.|.. +.+.+|+.. ...+ .+...||
T Consensus 12 ~~~~pf~i~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln~~~~f~~~i~G 91 (394)
T d1qo7a_ 12 ISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLNSFPQFTTEIEG 91 (394)
T ss_dssp SCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHTTSCEEEEEETT
T ss_pred CCCcceeeeCCHHHHHHHHHHHHhcCCCCCccccCCCccccCCCHHHHHHHHHHhhhcCCHHHHHHHHHcCCCeEEEECC
Confidence 345688999998888888887776654432221 114554443 333333321 1111 1112255
Q ss_pred CCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcC-C------ceEEEEeCCCCCCC---------CHHHHH
Q 005190 115 GPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-I------FDIWCLHIPVKDRT---------SFTGLV 178 (709)
Q Consensus 115 ~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~-~------~~Vi~~Dl~G~G~S---------s~~~~~ 178 (709)
-. +||....+..+++++|||+||++++...|..+++.|++ + |+|+++|+||||.| +..+++
T Consensus 92 ~~---iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~a 168 (394)
T d1qo7a_ 92 LT---IHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNA 168 (394)
T ss_dssp EE---EEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCCHHHHH
T ss_pred EE---EEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCccCHHHHH
Confidence 43 44433222234788999999999999999999999964 3 99999999999999 568889
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 179 KLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 179 ~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
+++..+++. ++..+.+++|||+||.++..+++.+|+.+.++++++....
T Consensus 169 ~~~~~l~~~----lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 169 RVVDQLMKD----LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp HHHHHHHHH----TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred HHHHHHHhh----ccCcceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 999998888 6677899999999999999999999999999998776543
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.3e-21 Score=192.91 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=84.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhc---CCceEEEEeCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~Dl~G~G~S------s~~~~~~dl~~~l~~~~~~~~~~~v~LvGh 202 (709)
.++|||+||++++...|..+.+.|. .+|+|+++|+||||.| +++++++++.++++. .+ ++++|+||
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~~~~~~~~~l~~~l~~----l~-~~~~lvGh 76 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAK----AP-QGVHLICY 76 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHH----CT-TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccccCHHHHHHHHHHHHhc----cC-CeEEEEcc
Confidence 4458999999999999999999995 3799999999999999 667888888888876 54 79999999
Q ss_pred chhHHHHHHHHHhCCC-ceeEEEEecCCCC
Q 005190 203 SLGACIALAVAARNPD-IDLVLILVNPATS 231 (709)
Q Consensus 203 S~GG~iAl~~A~~~P~-~v~~lVl~~p~~~ 231 (709)
||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 77 S~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 77 SQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred ccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 9999999999999998 5999999987543
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.86 E-value=2.8e-21 Score=203.55 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=82.7
Q ss_pred CCCCEEEEeCCCCCCcccHHH------HHHHh-cCCceEEEEeCCCCCCC----------------CHHHH-HHHHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIR------QHQRL-GKIFDIWCLHIPVKDRT----------------SFTGL-VKLVESTV 185 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~------~~~~L-~~~~~Vi~~Dl~G~G~S----------------s~~~~-~~dl~~~l 185 (709)
..+|+|||+||+++++..|.. ++..| .+||+|+++|+||||.| +++++ ..|+.+++
T Consensus 56 ~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i 135 (377)
T d1k8qa_ 56 GRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATI 135 (377)
T ss_dssp TTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHH
T ss_pred CCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHH
Confidence 357899999999999999853 67777 48999999999999998 23444 34777778
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 005190 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 186 ~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p 228 (709)
+.+....+.++++|+||||||++++.+|..+|+.++++++++.
T Consensus 136 ~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~ 178 (377)
T d1k8qa_ 136 DFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYA 178 (377)
T ss_dssp HHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEE
T ss_pred HHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEee
Confidence 7777778888999999999999999999999999887777554
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.86 E-value=1.8e-20 Score=192.00 Aligned_cols=236 Identities=14% Similarity=0.089 Sum_probs=147.3
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~-G~S-------s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
+..++||++||++++...|..+++.|+ +||+|+++|+||| |.| ++.++.+|+..+++++.... .++++|+
T Consensus 30 ~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~~~~~dl~~vi~~l~~~~-~~~i~lv 108 (302)
T d1thta_ 30 FKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG-TQNIGLI 108 (302)
T ss_dssp CCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCCHHHHHHHHHHHHHhhhccC-CceeEEE
Confidence 356789999999999999999999995 7899999999998 777 66889999999999987654 5789999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+++.+|.. ..++++|+.+|......... ..+..... ........... .....
T Consensus 109 G~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~----~~~~~~~~-------~~~~~~~~~~~--------~~~~~ 167 (302)
T d1thta_ 109 AASLSARVAYEVISD--LELSFLITAVGVVNLRDTLE----KALGFDYL-------SLPIDELPNDL--------DFEGH 167 (302)
T ss_dssp EETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHH----HHHSSCGG-------GSCGGGCCSEE--------EETTE
T ss_pred EEchHHHHHHHHhcc--cccceeEeecccccHHHHHH----HHHhhccc-------hhhhhhccccc--------ccccc
Confidence 999999999988864 44888999887654321110 00000000 00000000000 00000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
......+..+... ...+.+ ......+.++++|+|+++|++|.+++++. ++.+.+.++
T Consensus 168 ~~~~~~~~~~~~~-----------~~~~~~-----------~~~~~~~~~i~~PvLii~G~~D~~V~~~~-~~~l~~~i~ 224 (302)
T d1thta_ 168 KLGSEVFVRDCFE-----------HHWDTL-----------DSTLDKVANTSVPLIAFTANNDDWVKQEE-VYDMLAHIR 224 (302)
T ss_dssp EEEHHHHHHHHHH-----------TTCSSH-----------HHHHHHHTTCCSCEEEEEETTCTTSCHHH-HHHHHTTCT
T ss_pred chhhHHHHHHHHH-----------hHHHHH-----------HHHHHHHhhcCCCEEEEEeCCCCccCHHH-HHHHHHhCC
Confidence 0000011111100 000000 11224567899999999999999999997 999998765
Q ss_pred --CcEEEEEcCCCccccccChhhHHHHHhhc---ccccccCCCCCCcccCCCChHh
Q 005190 361 --KCEPRNFYGHGHFLLLEDGVDLVTIIKGA---SYYRRGRNHDYVSDFMPPTSSE 411 (709)
Q Consensus 361 --~~~~~~i~~aGH~~~le~p~~~~~~I~~~---~f~~r~~~~~~v~d~~~p~~~e 411 (709)
++++++++|+||.+. |+++.+...+++. ......-..+...++..|.-+.
T Consensus 225 s~~~kl~~~~g~~H~l~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 279 (302)
T d1thta_ 225 TGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQ 279 (302)
T ss_dssp TCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHH
T ss_pred CCCceEEEecCCCcccc-cChHHHHHHHHHHHHHHhhhcccccccccccCCccHHh
Confidence 689999999999875 5665544444432 2111222344456666666333
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.80 E-value=6e-19 Score=166.78 Aligned_cols=171 Identities=16% Similarity=0.153 Sum_probs=121.8
Q ss_pred EEEEeCCCCCCccc--HHHHHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005190 134 LLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (709)
Q Consensus 134 ~Vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl 210 (709)
.||++||++++... +..+.+.| .+||.|+++|+||+|.+..+++.+.+...++. . ..+++|+||||||.+++
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~~~~~~~~l~~~~~~----~-~~~~~lvGhS~Gg~~a~ 77 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHT----L-HENTYLVAHSLGCPAIL 77 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGG----C-CTTEEEEEETTHHHHHH
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcchHHHHHHHHHHHHhc----c-CCCcEEEEechhhHHHH
Confidence 59999999998755 56688888 47899999999999999988888877766543 3 57899999999999999
Q ss_pred HHHHhCCCce--eEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHH
Q 005190 211 AVAARNPDID--LVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288 (709)
Q Consensus 211 ~~A~~~P~~v--~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (709)
.++.++|+.. .+++.+.+......... ........
T Consensus 78 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~--------------------~~~~~~~~----------------------- 114 (186)
T d1uxoa_ 78 RFLEHLQLRAALGGIILVSGFAKSLPTLQ--------------------MLDEFTQG----------------------- 114 (186)
T ss_dssp HHHHTCCCSSCEEEEEEETCCSSCCTTCG--------------------GGGGGTCS-----------------------
T ss_pred HHHHhCCccceeeEEeecccccccchhhh--------------------hhhhhhcc-----------------------
Confidence 9999998764 44444443222110000 00000000
Q ss_pred HhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEEc
Q 005190 289 QDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 368 (709)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i~ 368 (709)
... ......+.+|+++|+|++|.++|.+. .+.+++.+ ++++++++
T Consensus 115 -----------------~~~----------------~~~~~~~~~p~lvi~g~~D~~vp~~~-~~~l~~~~-~~~~~~~~ 159 (186)
T d1uxoa_ 115 -----------------SFD----------------HQKIIESAKHRAVIASKDDQIVPFSF-SKDLAQQI-DAALYEVQ 159 (186)
T ss_dssp -----------------CCC----------------HHHHHHHEEEEEEEEETTCSSSCHHH-HHHHHHHT-TCEEEEET
T ss_pred -----------------ccc----------------ccccccCCCCEEEEecCCCCCCCHHH-HHHHHHHc-CCEEEEeC
Confidence 000 00112346799999999999999997 89999887 78999999
Q ss_pred CCCccccccC---hhhHHHHHh
Q 005190 369 GHGHFLLLED---GVDLVTIIK 387 (709)
Q Consensus 369 ~aGH~~~le~---p~~~~~~I~ 387 (709)
++||+...+. -.++.+.|+
T Consensus 160 ~~gH~~~~~~~~~~~~~~~~l~ 181 (186)
T d1uxoa_ 160 HGGHFLEDEGFTSLPIVYDVLT 181 (186)
T ss_dssp TCTTSCGGGTCSCCHHHHHHHH
T ss_pred CCCCcCccccCcccHHHHHHHH
Confidence 9999876652 235667777
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.77 E-value=7.3e-18 Score=162.20 Aligned_cols=163 Identities=17% Similarity=0.133 Sum_probs=126.1
Q ss_pred CCEEEEeCCC---CCCcc--cHHHHHHHh-cCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005190 132 SPLLLFLPGI---DGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (709)
Q Consensus 132 ~p~Vv~lHG~---~~s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~Lv 200 (709)
.+++|++|+. +++.. .+..+++.| +.||.|+.+|+||+|.| ....+.+|+.++++++..+.+..+++++
T Consensus 35 ~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~~~~~~v~l~ 114 (218)
T d2fuka1 35 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLA 114 (218)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCcchHHHHHHHHHHHhhcccCceEEEE
Confidence 3467888844 33332 355677888 47999999999999999 4567889999999999888888899999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
||||||.+|+.+|... .++++|+++|.....
T Consensus 115 G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------------------------------------- 145 (218)
T d2fuka1 115 GFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------------------------------------- 145 (218)
T ss_dssp EETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-----------------------------------------------
T ss_pred EEcccchhhhhhhccc--ccceEEEeCCcccch-----------------------------------------------
Confidence 9999999999998874 367899998742100
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
+ .....+.+|+|+|+|++|.++|.+. .+++.+.++
T Consensus 146 ---------~-----------------------------------~~~~~~~~P~Lvi~G~~D~~vp~~~-~~~l~~~~~ 180 (218)
T d2fuka1 146 ---------D-----------------------------------FSDVQPPAQWLVIQGDADEIVDPQA-VYDWLETLE 180 (218)
T ss_dssp ---------C-----------------------------------CTTCCCCSSEEEEEETTCSSSCHHH-HHHHHTTCS
T ss_pred ---------h-----------------------------------hhccccccceeeEecCCCcCcCHHH-HHHHHHHcc
Confidence 0 0012356899999999999999997 888877655
Q ss_pred -CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 361 -KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 361 -~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
..++++++|++|+.. ++-+++.+.+.+|
T Consensus 181 ~~~~l~~i~ga~H~f~-~~~~~l~~~~~~~ 209 (218)
T d2fuka1 181 QQPTLVRMPDTSHFFH-RKLIDLRGALQHG 209 (218)
T ss_dssp SCCEEEEETTCCTTCT-TCHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCCC-CCHHHHHHHHHHH
Confidence 578999999999765 4556688888854
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.77 E-value=4.6e-18 Score=178.20 Aligned_cols=210 Identities=11% Similarity=0.070 Sum_probs=135.0
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~LvG 201 (709)
..|+||++||++++...+..+...| .+||.|+++|+||||.| +++.....+.+++..... ....+|.|+|
T Consensus 130 ~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~-vd~~rI~l~G 208 (360)
T d2jbwa1 130 PHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEA-IRNDAIGVLG 208 (360)
T ss_dssp CEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTT-EEEEEEEEEE
T ss_pred CceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccccccHHHHHHHHHHHHHhccc-ccccceeehh
Confidence 3679999999999988888888888 58999999999999988 334444444444443211 2236799999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCc
Q 005190 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (709)
Q Consensus 202 hS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (709)
|||||.+|+.+|+..|. ++++|..++......... ........+... ... ..
T Consensus 209 ~S~GG~~Al~~A~~~pr-i~a~V~~~~~~~~~~~~~---------~~~~~~~~~~~~----~~~-------------~~- 260 (360)
T d2jbwa1 209 RSLGGNYALKSAACEPR-LAACISWGGFSDLDYWDL---------ETPLTKESWKYV----SKV-------------DT- 260 (360)
T ss_dssp ETHHHHHHHHHHHHCTT-CCEEEEESCCSCSTTGGG---------SCHHHHHHHHHH----TTC-------------SS-
T ss_pred hhcccHHHHHHhhcCCC-cceEEEEcccccHHHHhh---------hhhhhhHHHHHh----ccC-------------Cc-
Confidence 99999999999998884 788888877544321110 000000000000 000 00
Q ss_pred hHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-
Q 005190 282 PTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH- 360 (709)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~- 360 (709)
...... ... ........+.+|+||+|+++|++|. +|.+. ++.+.+.++
T Consensus 261 --~~~~~~-------------------------~~~--~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~-~~~l~~~~~~ 309 (360)
T d2jbwa1 261 --LEEARL-------------------------HVH--AALETRDVLSQIACPTYILHGVHDE-VPLSF-VDTVLELVPA 309 (360)
T ss_dssp --HHHHHH-------------------------HHH--HHTCCTTTGGGCCSCEEEEEETTSS-SCTHH-HHHHHHHSCG
T ss_pred --hHHHHH-------------------------HHH--hhcchhhhHhhCCCCEEEEEeCCCC-cCHHH-HHHHHHhcCC
Confidence 000000 000 0011224567899999999999998 58886 888888877
Q ss_pred -CcEEEEEcCCCccccccChhhHHHHHhhc--ccccccCCCCCC
Q 005190 361 -KCEPRNFYGHGHFLLLEDGVDLVTIIKGA--SYYRRGRNHDYV 401 (709)
Q Consensus 361 -~~~~~~i~~aGH~~~le~p~~~~~~I~~~--~f~~r~~~~~~v 401 (709)
+.+++++++++|.. .+.+.+....+.+| +.+..+++....
T Consensus 310 ~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~L~~g~~~apt 352 (360)
T d2jbwa1 310 EHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLVAGKKVAPT 352 (360)
T ss_dssp GGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHTSSCCCCCC
T ss_pred CCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHHhccCCCCCCC
Confidence 45677889999965 45677777777777 445555444443
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.5e-18 Score=173.79 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=74.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
.+++|||+||++++...|..+++.| +++|+++|+||+|.| +.++++++..+.+.. ..+.++++|+||||||.+|
T Consensus 24 ~~~Pl~l~Hg~~gs~~~~~~l~~~L--~~~v~~~d~~g~~~~~~~~~~a~~~~~~~~~---~~~~~~~~lvGhS~Gg~vA 98 (286)
T d1xkta_ 24 SERPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQ---VQPEGPYRVAGYSYGACVA 98 (286)
T ss_dssp CSCCEEEECCTTCCCGGGHHHHHTC--SSCEEEECCCTTSCCSCHHHHHHHHHHHHHH---HCCSSCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCccHHHHHHHHHHc--CCeEEEEeCCCCCCCCCHHHHHHHHHHHHHH---hcCCCceEEeecCCccHHH
Confidence 3445999999999999999999999 589999999999999 788888877655544 3566899999999999999
Q ss_pred HHHHHhCCCceeEEEEecC
Q 005190 210 LAVAARNPDIDLVLILVNP 228 (709)
Q Consensus 210 l~~A~~~P~~v~~lVl~~p 228 (709)
+.+|.++|+++.++++++.
T Consensus 99 ~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 99 FEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp HHHHHHHHHC------CCE
T ss_pred HHHHHHHHHcCCCceeEEE
Confidence 9999999999888776553
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.76 E-value=5e-18 Score=171.76 Aligned_cols=203 Identities=15% Similarity=0.139 Sum_probs=136.4
Q ss_pred CCCCEEEEeCCC--CCCcccHHHHHHHhcCCceEEEEeCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCE
Q 005190 130 RDSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPV 197 (709)
Q Consensus 130 ~~~p~Vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~~~~~~~~~~v 197 (709)
++.|+|+|+||+ +++...|..+++.|...++|+++|+||||.| +++++++++.+.+.. ..+..++
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~---~~~~~P~ 134 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILR---AAGDAPV 134 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHH---HHTTSCE
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHH---hcCCCce
Confidence 357889999995 5677899999999999999999999999976 567777766554432 3557799
Q ss_pred EEEEechhHHHHHHHHHhC----CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHH
Q 005190 198 YLVGESLGACIALAVAARN----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~----P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (709)
+|+||||||.+|+.+|.+. ++.+.++|++++................ .......... .
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-~------- 196 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQL----------GEGLFAGELE-P------- 196 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHH----------HHHHHHTCSS-C-------
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhh----------HHHhhccccc-c-------
Confidence 9999999999999999865 5679999999986554332211111000 0000000000 0
Q ss_pred HhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005190 274 VAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 353 (709)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~ 353 (709)
.....+........ .........+++|+++++|++|..++... ..
T Consensus 197 -------------------------------~~~~~l~a~~~~~~---~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~-~~ 241 (283)
T d2h7xa1 197 -------------------------------MSDARLLAMGRYAR---FLAGPRPGRSSAPVLLVRASEPLGDWQEE-RG 241 (283)
T ss_dssp -------------------------------CCHHHHHHHHHHHH---HHHSCCCCCCCSCEEEEEESSCSSCCCGG-GC
T ss_pred -------------------------------cccHHHHHHHHHHH---HHhhccccccCCCeEEEEeCCCCCCCHHH-HH
Confidence 00000000000000 11113346789999999999999999886 66
Q ss_pred HHHhhcCC-cEEEEEcCCCccccc-cChhhHHHHHhhc
Q 005190 354 RLSSALHK-CEPRNFYGHGHFLLL-EDGVDLVTIIKGA 389 (709)
Q Consensus 354 ~l~~~~~~-~~~~~i~~aGH~~~l-e~p~~~~~~I~~~ 389 (709)
.+.+..++ .+++.+++ ||+.++ |+++.+++.|.+|
T Consensus 242 ~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~ 278 (283)
T d2h7xa1 242 DWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSW 278 (283)
T ss_dssp CCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHH
T ss_pred HHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHH
Confidence 77776654 68889986 898654 6799999999966
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.75 E-value=2.4e-18 Score=168.06 Aligned_cols=206 Identities=17% Similarity=0.194 Sum_probs=125.2
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~ 211 (709)
+++|||+||++++...|..+++.|+ +|.|+++|++|+|. .++++.+.+.. ..+..+++|+||||||.+|+.
T Consensus 17 ~~~l~~lhg~~g~~~~~~~la~~L~-~~~v~~~~~~g~~~-----~a~~~~~~i~~---~~~~~~~~lvGhS~GG~vA~~ 87 (230)
T d1jmkc_ 17 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEEED-----RLDRYADLIQK---LQPEGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT-TEEEEEECCCCSTT-----HHHHHHHHHHH---HCCSSCEEEEEETHHHHHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHCC-CCEEeccCcCCHHH-----HHHHHHHHHHH---hCCCCcEEEEeeccChHHHHH
Confidence 6789999999999999999999995 79999999999974 44454444444 245678999999999999999
Q ss_pred HHHhCCCc---eeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHH
Q 005190 212 VAARNPDI---DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288 (709)
Q Consensus 212 ~A~~~P~~---v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (709)
+|.++|+. +..++.+++........... ........ ....... .. ...........+.
T Consensus 88 ~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~-~~---------~~~~~~~~~~~~~ 148 (230)
T d1jmkc_ 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDG------RTVESDVE---ALMNVNR-DN---------EALNSEAVKHGLK 148 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC--------------CCHH---HHHHHTT-TC---------SGGGSHHHHHHHH
T ss_pred HHHhhhhhCccceeeecccccCccchhhhhh------hhhhhhhh---hhhhccc-cc---------cccccHHHHHHHH
Confidence 99887654 55555555432221111000 00000000 0000000 00 0000000000000
Q ss_pred HhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhc-CCcEEEEE
Q 005190 289 QDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNF 367 (709)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~-~~~~~~~i 367 (709)
.. .. .... ..........+++|+++|+|++|..++... ..+.+.. ++.+++++
T Consensus 149 ~~-------------------~~---~~~~--~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~--~~w~~~~~~~~~~~~i 202 (230)
T d1jmkc_ 149 QK-------------------TH---AFYS--YYVNLISTGQVKADIDLLTSGADFDIPEWL--ASWEEATTGAYRMKRG 202 (230)
T ss_dssp HH-------------------HH---HHHH--HHHHCCCCSCBSSEEEEEECSSCCCCCTTE--ECSGGGBSSCEEEEEC
T ss_pred HH-------------------HH---HHHH--hhhcccccccccCcceeeeecCCcccchhH--HHHHHhccCCcEEEEE
Confidence 00 00 0000 011124557789999999999999998763 3444444 46788888
Q ss_pred cCCCccccccCh--hhHHHHHhhcccccc
Q 005190 368 YGHGHFLLLEDG--VDLVTIIKGASYYRR 394 (709)
Q Consensus 368 ~~aGH~~~le~p--~~~~~~I~~~~f~~r 394 (709)
++ ||+.++++| ++++++|. +|++|
T Consensus 203 ~g-~H~~ml~~~~~~~va~~I~--~~L~~ 228 (230)
T d1jmkc_ 203 FG-THAEMLQGETLDRNAGILL--EFLNT 228 (230)
T ss_dssp SS-CGGGTTSHHHHHHHHHHHH--HHHTC
T ss_pred cC-CChhhcCCccHHHHHHHHH--HHHhh
Confidence 84 999999877 88999999 55554
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.71 E-value=3.3e-17 Score=153.69 Aligned_cols=163 Identities=15% Similarity=0.121 Sum_probs=125.4
Q ss_pred CEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005190 133 PLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (709)
Q Consensus 133 p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iA 209 (709)
++|||+||++++...|..+.+.| .++|.++.+|.+|++.+ .....++++.+.++.+....+.++++|+||||||.++
T Consensus 3 ~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~va 82 (179)
T d1ispa_ 3 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANT 82 (179)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccccchhhhhHHHHHHHHHHhcCCceEEEEeecCcCHHH
Confidence 45899999999999999999999 47899999999999988 4455555666666665555677899999999999999
Q ss_pred HHHHHhC--CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHH
Q 005190 210 LAVAARN--PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL 287 (709)
Q Consensus 210 l~~A~~~--P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (709)
..++.++ |++|+++|+++++...... ..
T Consensus 83 ~~~~~~~~~~~~V~~~V~l~~p~~g~~~---------~~----------------------------------------- 112 (179)
T d1ispa_ 83 LYYIKNLDGGNKVANVVTLGGANRLTTG---------KA----------------------------------------- 112 (179)
T ss_dssp HHHHHHSSGGGTEEEEEEESCCGGGTCS---------BC-----------------------------------------
T ss_pred HHHHHHcCCchhhCEEEEECCCCCCchh---------hh-----------------------------------------
Confidence 9999887 6789999999873211000 00
Q ss_pred HHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCCcEEEEE
Q 005190 288 SQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 367 (709)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~~~~~~i 367 (709)
++ .......+|++.|+|+.|.++++.. + .+++++.+.+
T Consensus 113 -----------------l~-------------------~~~~~~~~~~~~i~~~~D~~v~~~~-~-----~l~~~~~~~~ 150 (179)
T d1ispa_ 113 -----------------LP-------------------GTDPNQKILYTSIYSSADMIVMNYL-S-----RLDGARNVQI 150 (179)
T ss_dssp -----------------CC-------------------CSCTTCCCEEEEEEETTCSSSCHHH-H-----CCBTSEEEEE
T ss_pred -----------------cC-------------------CcccccCceEEEEEecCCcccCchh-h-----cCCCceEEEE
Confidence 00 0012346799999999999999874 3 4678999999
Q ss_pred cCCCccccccChhhHHHHHhh
Q 005190 368 YGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 368 ~~aGH~~~le~p~~~~~~I~~ 388 (709)
+++||..++.+| ++.+.|.+
T Consensus 151 ~~~~H~~l~~~~-~v~~~i~~ 170 (179)
T d1ispa_ 151 HGVGHIGLLYSS-QVNSLIKE 170 (179)
T ss_dssp SSCCTGGGGGCH-HHHHHHHH
T ss_pred CCCCchhhccCH-HHHHHHHH
Confidence 999999998888 56666663
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.69 E-value=2.7e-17 Score=166.63 Aligned_cols=192 Identities=13% Similarity=0.032 Sum_probs=127.9
Q ss_pred cCCCCCCCCeEEEeccccchhhHHhhHHHHHHH---hcceEeeeccccccccccCCCCCCCChHHHHHHhcCccccHH--
Q 005190 443 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE---SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI-- 517 (709)
Q Consensus 443 ~e~ip~~~p~i~v~NH~~~~~d~~~~~~~~~~~---~~~~~~~la~~~~~~~~~~~~~p~~~~~~~~~~~g~i~v~~~-- 517 (709)
.|++|..+++|+++||++. +|.+++...+.+. ..+.++++|+..+|..|+ ++.+++..|+|+|.++
T Consensus 123 ~Ekl~~g~nVIlvSNHqS~-~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl--------~~~f~~~~g~I~V~rk~~ 193 (367)
T d1iuqa_ 123 EEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLADPL--------CKPFSIGRNLICVYSKKH 193 (367)
T ss_dssp HHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTT--------THHHHHTSEEEECCCGGG
T ss_pred HHHhcCCCCEEEEECCccc-ccHHHHHHHHhccccccccceEEEeehhhhccHH--------HHHHHHhCCEEEEecccc
Confidence 4789999999999999976 5876766554321 235689999999998743 7889999999999552
Q ss_pred --------------------HHHHHhcCCC-eEEEecCchhhhhcc-CCccceeccCCChh----HHHHHHHcCCc--EE
Q 005190 518 --------------------NLYKLMSSKS-HVLLYPGGVREALHR-KGEEYKLFWPESSE----FVRMATTFGAK--IV 569 (709)
Q Consensus 518 --------------------~~~~~L~~g~-~v~ifPeG~r~~~~~-~~~~~~l~~~~k~G----~~~lA~~~~~p--Iv 569 (709)
.+.++|++|+ .|+|||||||+.... .|+.+. . +|+++ +++||.++|+| |+
T Consensus 194 i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p-~-~F~~~~~~~~~~LA~~sgvP~hV~ 271 (367)
T d1iuqa_ 194 MFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYP-A-PFDASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp TTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCC-C-CCCHHHHHHHHHHHHTSSSCEEEE
T ss_pred ccccccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCcccccccccc-c-ccCccchHHHHHHHhcCCCCceEe
Confidence 2445677774 678999999964321 122222 1 44544 47899999999 99
Q ss_pred EeeeecchhhhhhhcCccccccCccchHHHHHHHhhhhhccccccccccCcccccCccCCCCCceEEEEecCccccCCcc
Q 005190 570 PFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRK 649 (709)
Q Consensus 570 Pv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~pI~~~~~~ 649 (709)
|+++.|.+.+..... +... ++ ..| .+ ..+++.+.||+||++....
T Consensus 272 Pvai~~~d~~pP~~~----------v~~~---ig----e~R-----------------~~-~~~~V~i~~G~pId~~~~~ 316 (367)
T d1iuqa_ 272 PLALLCHDIMPPPSQ----------VEIE---IG----EKR-----------------VI-AFNGAGLSVAPEISFEEIA 316 (367)
T ss_dssp EEEEECGGGSCCC---------------------------C-----------------CC-CCBCCEEEECCCCCHHHHH
T ss_pred chhhhcccccCCCcc----------cccc---hh----hcc-----------------cc-CCCceeEEeCCCcchhhhh
Confidence 999998766511000 0000 00 000 11 2577999999999998765
Q ss_pred cccCCH-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 005190 650 RELRDR-EKAHELYLEIKSEVEKCLAYLKEKR 680 (709)
Q Consensus 650 ~~~~~~-~~~~~~~~~v~~~i~~~~~~l~~~r 680 (709)
....+. +..+.+.+.+.+++.+.+..|+..-
T Consensus 317 ~~~~~~~e~~ea~~k~l~d~v~eq~~~Lk~ai 348 (367)
T d1iuqa_ 317 ATHKNPEEVREAYSKALFDSVAMQYNVLKTAI 348 (367)
T ss_dssp HTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444454 4444556667778877776666543
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.67 E-value=7.8e-16 Score=159.32 Aligned_cols=258 Identities=10% Similarity=0.067 Sum_probs=162.5
Q ss_pred cccccccCCCCCC-CCCEEEEeCCCCCCcccHHHHH------HHh-cCCceEEEEeCCCCCCC-----------------
Q 005190 118 RWFSPLECGSHTR-DSPLLLFLPGIDGVGLGLIRQH------QRL-GKIFDIWCLHIPVKDRT----------------- 172 (709)
Q Consensus 118 ~~~~~~~~g~p~~-~~p~Vv~lHG~~~s~~~~~~~~------~~L-~~~~~Vi~~Dl~G~G~S----------------- 172 (709)
..+.|...|.++. +.++||+.|++.++...-..+- ..| .+.|.|+|+|..|.|.+
T Consensus 29 ~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~y 108 (376)
T d2vata1 29 VPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPY 108 (376)
T ss_dssp EEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBC
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcc
Confidence 5678888887543 4568999999988876432221 122 26799999999988753
Q ss_pred -------CHHHHHHHHHHHHHHhhccCCCCCE-EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhh---
Q 005190 173 -------SFTGLVKLVESTVRSESNRSPKRPV-YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--- 241 (709)
Q Consensus 173 -------s~~~~~~dl~~~l~~~~~~~~~~~v-~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~--- 241 (709)
++.|+++.-..++++ ++.+++ .++|.||||++|+.+|..+|+.|.++|.++..............
T Consensus 109 g~~FP~~ti~D~v~aq~~ll~~----LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~ 184 (376)
T d2vata1 109 GAKFPRTTIRDDVRIHRQVLDR----LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQR 184 (376)
T ss_dssp GGGCCCCCHHHHHHHHHHHHHH----HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHH
T ss_pred cccCCcchhHHHHHHHHHHHHH----hCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHH
Confidence 335666666666665 566776 68899999999999999999999999999886654332211110
Q ss_pred HHHhhchhh-------------hHHhHHHhhhhhcCchhhhHHHHHhhccCC----------------------------
Q 005190 242 PLLELIPGQ-------------ITTMLSSTLSLMTGDPLKMAMDNVAKRLSL---------------------------- 280 (709)
Q Consensus 242 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 280 (709)
..+..-|.. .-.....+.......+ ..+...+..
T Consensus 185 ~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~-----~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~ 259 (376)
T d2vata1 185 QCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSK-----PAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSH 259 (376)
T ss_dssp HHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCH-----HHHHHHSCCCCCCC-----------------------
T ss_pred HHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCH-----HHHHHHHhhccccccccccccchhhhccccccccccc
Confidence 111111100 0000000000000000 000000000
Q ss_pred -----chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhh------hHhhhhcccCCccEEEEeeCCCCCCCcH
Q 005190 281 -----QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAAS------AYANSRLHAVKAQMLVLCSGKDQLMPSQ 349 (709)
Q Consensus 281 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLvi~G~~D~~v~~~ 349 (709)
...++.... .....+...+....+......+..++ ....+.+.+|++|+|+|.++.|.+.|++
T Consensus 260 ~~~~~~~~vesyL~------~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~ 333 (376)
T d2vata1 260 RAGQPIEAVSSYLR------YQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFD 333 (376)
T ss_dssp ----CGGGHHHHHH------HHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHH
T ss_pred ccccchhHHHHHHH------HHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHH
Confidence 000111100 01123444556666666666666543 1345668999999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEEc-CCCccccccChhhHHHHHhhccccc
Q 005190 350 EEGERLSSALHKCEPRNFY-GHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 350 ~~~~~l~~~~~~~~~~~i~-~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
. .+.+++.++++++++++ ..||..++.+++.+.+.|+ .|+.
T Consensus 334 ~-~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~--~FL~ 375 (376)
T d2vata1 334 E-HVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVR--GFLD 375 (376)
T ss_dssp H-HHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHH--HHHT
T ss_pred H-HHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHHH--HHHc
Confidence 7 99999999999999998 6799988888999999999 5554
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.67 E-value=3.4e-16 Score=153.53 Aligned_cols=187 Identities=20% Similarity=0.188 Sum_probs=117.3
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCCC-----------HHHHHHH----HHHHHHHhh--ccC
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTS-----------FTGLVKL----VESTVRSES--NRS 192 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~Ss-----------~~~~~~d----l~~~l~~~~--~~~ 192 (709)
..|+||++||++++...|..+++.|+ .||.|+++|+||||.|. +.+..++ +.++...+. ...
T Consensus 23 ~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
T d1ufoa_ 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERR 102 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhcccc
Confidence 47899999999999999999999995 79999999999999881 1222222 222211111 112
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHH
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (709)
...++.++|||+||.+++.+++.+|+....+.++++......... .....
T Consensus 103 ~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~--------------------- 152 (238)
T d1ufoa_ 103 FGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG---------QVVED--------------------- 152 (238)
T ss_dssp HCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT---------CCCCC---------------------
T ss_pred CCceEEEEEecccHHHHHHHHhcCcchhheeeeeeeccccccccc---------ccccc---------------------
Confidence 346899999999999999999999987665555443222111000 00000
Q ss_pred HHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005190 273 NVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 352 (709)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~ 352 (709)
......... ..........++|+|+++|++|.+++.+. +
T Consensus 153 ---------~~~~~~~~~-------------------------------~~~~~~~~~~~~P~li~~G~~D~~v~~~~-~ 191 (238)
T d1ufoa_ 153 ---------PGVLALYQA-------------------------------PPATRGEAYGGVPLLHLHGSRDHIVPLAR-M 191 (238)
T ss_dssp ---------HHHHHHHHS-------------------------------CGGGCGGGGTTCCEEEEEETTCTTTTHHH-H
T ss_pred ---------ccccchhhh-------------------------------hhhhhhhhhcCCCeEEEEcCCCCccCHHH-H
Confidence 000000000 00001113346899999999999999997 8
Q ss_pred HHHHhhcC------CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 353 ERLSSALH------KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 353 ~~l~~~~~------~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
..+.+.+. ++++..++|+||.+.-+.-....+.+.+
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~ 233 (238)
T d1ufoa_ 192 EKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEH 233 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHH
Confidence 77776442 4678889999998764433343444443
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.66 E-value=1.2e-15 Score=156.66 Aligned_cols=259 Identities=13% Similarity=0.094 Sum_probs=159.8
Q ss_pred cccccccCCCCCCC-CCEEEEeCCCCCCcccH---------HHHH---HHh-cCCceEEEEeCCCCCCC-----------
Q 005190 118 RWFSPLECGSHTRD-SPLLLFLPGIDGVGLGL---------IRQH---QRL-GKIFDIWCLHIPVKDRT----------- 172 (709)
Q Consensus 118 ~~~~~~~~g~p~~~-~p~Vv~lHG~~~s~~~~---------~~~~---~~L-~~~~~Vi~~Dl~G~G~S----------- 172 (709)
..+.|...|.+++. .++||+.|++.++...+ ..++ ..| .+.|.|+++|..|.|.+
T Consensus 24 ~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~t 103 (357)
T d2b61a1 24 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQT 103 (357)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTT
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCC
Confidence 57788888886544 47899999999987653 2221 223 25699999999997653
Q ss_pred -----------CHHHHHHHHHHHHHHhhccCCCCCE-EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhh
Q 005190 173 -----------SFTGLVKLVESTVRSESNRSPKRPV-YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240 (709)
Q Consensus 173 -----------s~~~~~~dl~~~l~~~~~~~~~~~v-~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~ 240 (709)
++.|+++....++++ ++.+++ .++|.||||++|+.+|..+|+.|.++|.++.............
T Consensus 104 g~~~g~~FP~iti~D~v~aq~~Ll~~----LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~ 179 (357)
T d2b61a1 104 GKPYGSQFPNIVVQDIVKVQKALLEH----LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFN 179 (357)
T ss_dssp SSBCGGGCCCCCHHHHHHHHHHHHHH----TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHH
T ss_pred CCCCCcccccchhHHHHHHHHHHHHH----hCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHH
Confidence 446677766667666 777787 6779999999999999999999999999988654433221111
Q ss_pred h---HHHhhchhhh----------HH--hHHHhhhhhc-CchhhhHHHHHhhcc-C------CchHHHHHHHhHHHhhcc
Q 005190 241 I---PLLELIPGQI----------TT--MLSSTLSLMT-GDPLKMAMDNVAKRL-S------LQPTIQDLSQDLVALSSY 297 (709)
Q Consensus 241 ~---~~~~~~~~~~----------~~--~~~~~~~~~~-~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~ 297 (709)
. ..+..-+... .. .....+..+. ...... ...+.... . .....+..... .
T Consensus 180 ~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~-~~~f~r~~~~~~~~~~~~~~vesyL~~------~ 252 (357)
T d2b61a1 180 HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL-AKAFGRATKSDGSFWGDYFQVESYLSY------Q 252 (357)
T ss_dssp HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH-HHHTTTCBCTTCCTTSCCBHHHHHHHH------H
T ss_pred HHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHH-HHHhccccccccccccchhhHHHHHHH------H
Confidence 1 1111111100 00 0000000000 000000 00000000 0 00001111111 1
Q ss_pred hhhhhhcCChhhHHHHHHHHHHhh-----hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC----CcEEEEEc
Q 005190 298 LPVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNFY 368 (709)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~----~~~~~~i~ 368 (709)
...+...+....+....+.+..++ ....+.|.+|++|+|+|..+.|.+.|++. .+.+++.++ ++++++++
T Consensus 253 g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~-~~~~a~~l~~~~~~v~~~~I~ 331 (357)
T d2b61a1 253 GKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPID-LYKSKQLLEQSGVDLHFYEFP 331 (357)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHH-HHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHH-HHHHHHHHHhcCCCeEEEEEC
Confidence 113344456666666666665443 23456789999999999999999999986 777777664 46888888
Q ss_pred CC-CccccccChhhHHHHHhh
Q 005190 369 GH-GHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 369 ~a-GH~~~le~p~~~~~~I~~ 388 (709)
.. ||..++-+.+++.+.|++
T Consensus 332 S~~GHdafL~e~~~~~~~I~~ 352 (357)
T d2b61a1 332 SDYGHDAFLVDYDQFEKRIRD 352 (357)
T ss_dssp CTTGGGHHHHCHHHHHHHHHH
T ss_pred CCCCccccCcCHHHHHHHHHH
Confidence 55 999999899999999983
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=7.6e-16 Score=157.65 Aligned_cols=205 Identities=15% Similarity=0.093 Sum_probs=129.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCCC-------------------------HHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS-------------------------FTGLVKLVEST 184 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss-------------------------~~~~~~dl~~~ 184 (709)
..|+||++||++++...|..++..| .+||.|+++|+||||.|+ ......|....
T Consensus 81 ~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 160 (318)
T d1l7aa_ 81 PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHH
Confidence 3689999999999999999999999 489999999999999981 12334455555
Q ss_pred HHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhh
Q 005190 185 VRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 185 l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
++.+..+.. ..++.++|+|+||..++..+...++. .+++...+........ ................. .
T Consensus 161 ~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~ 231 (318)
T d1l7aa_ 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIP-KAAVADYPYLSNFERA-------IDVALEQPYLEINSFFR-R 231 (318)
T ss_dssp HHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCC-SEEEEESCCSCCHHHH-------HHHCCSTTTTHHHHHHH-H
T ss_pred HHHHHhcccccCcceEEEeeccccHHHHHHhhcCccc-ceEEEeccccccHHHH-------hhcccccccchhhhhhh-c
Confidence 555444332 35689999999999999999998764 4555555533221110 00000000000000000 0
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
.. ......... ... ........+.++++|+|+++|++
T Consensus 232 ~~---------------~~~~~~~~~--------------------------~~~--~~~~~~~~~~~i~~P~Lii~G~~ 268 (318)
T d1l7aa_ 232 NG---------------SPETEVQAM--------------------------KTL--SYFDIMNLADRVKVPVLMSIGLI 268 (318)
T ss_dssp SC---------------CHHHHHHHH--------------------------HHH--HTTCHHHHGGGCCSCEEEEEETT
T ss_pred cc---------------ccccccccc--------------------------ccc--cccccccccccCCCCEEEEEECC
Confidence 00 000000000 000 00111234578999999999999
Q ss_pred CCCCCcHHHHHHHHhhcC-CcEEEEEcCCCccccccChhhHHHHHhh
Q 005190 343 DQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIKG 388 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~le~p~~~~~~I~~ 388 (709)
|.++|++. +..+.+.++ +.++++++++||....+..+++.+.+++
T Consensus 269 D~~vp~~~-~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~~ 314 (318)
T d1l7aa_ 269 DKVTPPST-VFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQ 314 (318)
T ss_dssp CSSSCHHH-HHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CCCcCHHH-HHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHHH
Confidence 99999997 888888776 6899999999998776666666665554
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.65 E-value=1.5e-15 Score=156.33 Aligned_cols=261 Identities=16% Similarity=0.184 Sum_probs=157.1
Q ss_pred cccccccCCCCCCC-CCEEEEeCCCCCCccc-------------HHHHH---HHh-cCCceEEEEeCCCCCCC-------
Q 005190 118 RWFSPLECGSHTRD-SPLLLFLPGIDGVGLG-------------LIRQH---QRL-GKIFDIWCLHIPVKDRT------- 172 (709)
Q Consensus 118 ~~~~~~~~g~p~~~-~p~Vv~lHG~~~s~~~-------------~~~~~---~~L-~~~~~Vi~~Dl~G~G~S------- 172 (709)
..+.|...|.++.. .++||+.|++.++... |..++ ..| .+.|.|+++|..|.|.|
T Consensus 27 ~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~ 106 (362)
T d2pl5a1 27 VVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSI 106 (362)
T ss_dssp EEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSB
T ss_pred ceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcccc
Confidence 57788888875443 4689999999887532 22222 222 25699999999998765
Q ss_pred ---------------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhh
Q 005190 173 ---------------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV 236 (709)
Q Consensus 173 ---------------s~~~~~~dl~~~l~~~~~~~~~~~v~-LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~ 236 (709)
++.|++.....++++ ++.+++. ++|.||||++|+.+|..||+.|+.+|.++.........
T Consensus 107 ~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~----LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~ 182 (362)
T d2pl5a1 107 HPETSTPYGSRFPFVSIQDMVKAQKLLVES----LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 182 (362)
T ss_dssp CTTTSSBCGGGSCCCCHHHHHHHHHHHHHH----TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred ccccccccCcCCccchhHHHHHHHHHHHHH----hCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHH
Confidence 234555555555555 7777776 77999999999999999999999999998866543222
Q ss_pred hhhhh---HHHhhchhhhHHhHHHhhhhh-c-Cchh-hhHHHHH---hhccCCchHHHHHHHh---------HHHhhcc-
Q 005190 237 LQSTI---PLLELIPGQITTMLSSTLSLM-T-GDPL-KMAMDNV---AKRLSLQPTIQDLSQD---------LVALSSY- 297 (709)
Q Consensus 237 ~~~~~---~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~- 297 (709)
..... ..+..-+.. .... . ..+. .....+. ....+.....+.+... ......+
T Consensus 183 ~~~~~~~~~aI~~Dp~~--------~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl 254 (362)
T d2pl5a1 183 IAFNEVGRQAILSDPNW--------KNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYL 254 (362)
T ss_dssp HHHHHHHHHHHHTSTTC--------GGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGG
T ss_pred HHHHHHHHHHHhcCCcc--------ccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHH
Confidence 11111 111110100 0000 0 0000 0000000 0000000001111000 0000000
Q ss_pred ---hhhhhhcCChhhHHHHHHHHHHhh----hHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcCC----cEEEE
Q 005190 298 ---LPVLADILPKETLLWKIELLKAAS----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK----CEPRN 366 (709)
Q Consensus 298 ---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~~----~~~~~ 366 (709)
...+...+....+....+.+..++ ....+.+.+|++|+|+|..+.|.+.|++. .+.+++.+++ +++++
T Consensus 255 ~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~-~~~~a~~l~~a~~~v~~~e 333 (362)
T d2pl5a1 255 IYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ-SREIVKSLEAADKRVFYVE 333 (362)
T ss_dssp GSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH-HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHH-HHHHHHHHHhCCCCeEEEE
Confidence 112223345556666666665443 23456789999999999999999999997 8888887764 46776
Q ss_pred Ec-CCCccccccChhhHHHHHhhccccc
Q 005190 367 FY-GHGHFLLLEDGVDLVTIIKGASYYR 393 (709)
Q Consensus 367 i~-~aGH~~~le~p~~~~~~I~~~~f~~ 393 (709)
++ ..||..++.+.+++.+.|+ .|+.
T Consensus 334 I~S~~GHdaFL~e~~~~~~~I~--~FL~ 359 (362)
T d2pl5a1 334 LQSGEGHDSFLLKNPKQIEILK--GFLE 359 (362)
T ss_dssp ECCCBSSGGGGSCCHHHHHHHH--HHHH
T ss_pred eCCCCCcchhccCHHHHHHHHH--HHHc
Confidence 75 5699999999999999999 4543
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.64 E-value=1.2e-15 Score=152.16 Aligned_cols=212 Identities=15% Similarity=0.161 Sum_probs=136.0
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCC--CCCcccHHHHHHHh-cCCceEEEEeCCCCCCCCH-----------HHHH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGI--DGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSF-----------TGLV 178 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~--~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~-----------~~~~ 178 (709)
||..+.-+.|..... ..+.|+||++||. +.....|......| ++||.|+++|++|+|.+.. ....
T Consensus 21 dG~~i~~~l~~p~~~-~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~~~~~ 99 (260)
T d2hu7a2 21 DGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGEL 99 (260)
T ss_dssp TSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHH
T ss_pred CCCEEEEEEEeCCCC-CCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccccchhhh
Confidence 554543333343333 2346799999983 44456677777777 5899999999999977611 2446
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHh
Q 005190 179 KLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (709)
Q Consensus 179 ~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (709)
+|+.++++.+.......++.++|+|+||.+++.++..+|+.+++++..++....... ........ ...
T Consensus 100 ~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~--------~~~~~~~~----~~~ 167 (260)
T d2hu7a2 100 EDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEM--------YELSDAAF----RNF 167 (260)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHH--------HHTCCHHH----HHH
T ss_pred hhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhh--------hccccccc----ccc
Confidence 778888888777666678999999999999999999999999999988875542110 00000000 000
Q ss_pred hhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEE
Q 005190 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVL 338 (709)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi 338 (709)
... ...+ ..+ .+. .......+.++++|+|++
T Consensus 168 ~~~-------------------------~~~~---------------~~~-------~~~--~~~~~~~~~~~~~P~lii 198 (260)
T d2hu7a2 168 IEQ-------------------------LTGG---------------SRE-------IMR--SRSPINHVDRIKEPLALI 198 (260)
T ss_dssp HHH-------------------------HHCS---------------CHH-------HHH--HTCGGGCGGGCCSCEEEE
T ss_pred ccc-------------------------cccc---------------ccc-------ccc--ccchhhcccccCCCceee
Confidence 000 0000 000 000 011123457789999999
Q ss_pred eeCCCCCCCcHHHHHHHHhhc----CCcEEEEEcCCCccccc-cChhhHHHHHh
Q 005190 339 CSGKDQLMPSQEEGERLSSAL----HKCEPRNFYGHGHFLLL-EDGVDLVTIIK 387 (709)
Q Consensus 339 ~G~~D~~v~~~~~~~~l~~~~----~~~~~~~i~~aGH~~~l-e~p~~~~~~I~ 387 (709)
+|++|.++|.+. +..+.+.+ ..+++++++++||.+.. |+..++...+.
T Consensus 199 hG~~D~~vp~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~ 251 (260)
T d2hu7a2 199 HPQNDSRTPLKP-LLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAV 251 (260)
T ss_dssp EETTCSSSCSHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHH
T ss_pred ecccCceecHHH-HHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHH
Confidence 999999999997 77776543 35789999999998643 33334443334
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.63 E-value=2.2e-15 Score=149.56 Aligned_cols=200 Identities=14% Similarity=0.107 Sum_probs=130.3
Q ss_pred CCCEEEEeCCC--CCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 131 DSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 131 ~~p~Vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+.|+|+|+||. +++...|..++..|...+.|+++|+||+|.+ +++++++++.+.|.. ..+..+++|+|||
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~~~s~~~~a~~~~~~i~~---~~~~~P~~L~GhS 117 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIR---TQGDKPFVVAGHS 117 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCEESSHHHHHHHHHHHHHH---TTSSSCEEEEECS
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCCCCCHHHHHHHHHHHHHH---hCCCCCEEEEEeC
Confidence 57889999994 6778899999999988899999999999988 788888887766543 3567789999999
Q ss_pred hhHHHHHHHHHhC---CCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 204 LGACIALAVAARN---PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 204 ~GG~iAl~~A~~~---P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
|||.+|+.+|.+. .+.+.+++++++..+......... ... ......... .....
T Consensus 118 ~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~---~~~-----------~~~~~~~~~---------~~~~~ 174 (255)
T d1mo2a_ 118 AGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAW---LEE-----------LTATLFDRE---------TVRMD 174 (255)
T ss_dssp TTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHH---HHH-----------HHTTCC-------------CCCC
T ss_pred CcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhH---HHH-----------HHHHhhccc---------cccCC
Confidence 9999999999865 456899999998655322211110 000 000000000 00000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
...+..+ .+..+++. ......+.+|++++.+++|....... .+....+
T Consensus 175 ~~~l~a~-----------------------~~~~~~~~------~~~~~~~~~p~l~v~a~~~~~~~~~~---~w~~~~~ 222 (255)
T d1mo2a_ 175 DTRLTAL-----------------------GAYDRLTG------QWRPRETGLPTLLVSAGEPMGPWPDD---SWKPTWP 222 (255)
T ss_dssp HHHHHHH-----------------------HHHHHHHH------HCCCCCCCCCEEEEECCSSSSCCTTC---CCCCCCC
T ss_pred HHHHHHH-----------------------HHHHHHHh------cCCCccccceEEEeecCCCCCcchhh---HHHHhCC
Confidence 0000000 01111111 11235678999999998886554432 3334333
Q ss_pred -CcEEEEEcCCCccccc-cChhhHHHHHhhc
Q 005190 361 -KCEPRNFYGHGHFLLL-EDGVDLVTIIKGA 389 (709)
Q Consensus 361 -~~~~~~i~~aGH~~~l-e~p~~~~~~I~~~ 389 (709)
..+++.+++ +|+.++ ++++.+++.|.+|
T Consensus 223 ~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~ 252 (255)
T d1mo2a_ 223 FEHDTVAVPG-DHFTMVQEHADAIARHIDAW 252 (255)
T ss_dssp SSCEEEECCS-CCSSCSSCCHHHHHHHHHHH
T ss_pred CCcEEEEECC-CCcccccccHHHHHHHHHHH
Confidence 678888986 998544 5789999999976
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.60 E-value=6.4e-15 Score=140.77 Aligned_cols=166 Identities=20% Similarity=0.252 Sum_probs=124.1
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------------CH---HHHHHHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------------SF---TGLVKLVE 182 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------------s~---~~~~~dl~ 182 (709)
|++....|++ +.|+||++||++++...|..+.+.+..++.|++++.+..+.. +. ....+++.
T Consensus 6 y~~~~~~~~~--~~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T d2r8ba1 6 YFHKSRAGVA--GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMA 83 (203)
T ss_dssp SCEEEECCCT--TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHH
T ss_pred eEeecCCCCC--CCCEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHH
Confidence 4554445543 689999999999999999999999998999999977655433 22 33345555
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhh
Q 005190 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (709)
Q Consensus 183 ~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (709)
.+++......+.++++++|||+||.+++.+|..+|+.+.++++.++.......
T Consensus 84 ~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~--------------------------- 136 (203)
T d2r8ba1 84 DFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK--------------------------- 136 (203)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC---------------------------
T ss_pred HHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc---------------------------
Confidence 56665555566789999999999999999999999999999999874431100
Q ss_pred cCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCC
Q 005190 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 342 (709)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~ 342 (709)
........|+++++|++
T Consensus 137 ---------------------------------------------------------------~~~~~~~~~~~i~hG~~ 153 (203)
T d2r8ba1 137 ---------------------------------------------------------------ISPAKPTRRVLITAGER 153 (203)
T ss_dssp ---------------------------------------------------------------CCCCCTTCEEEEEEETT
T ss_pred ---------------------------------------------------------------cccccccchhhccccCC
Confidence 00022457999999999
Q ss_pred CCCCCcHHHHHHHHhhcC----CcEEEEEcCCCccccccC
Q 005190 343 DQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 343 D~~v~~~~~~~~l~~~~~----~~~~~~i~~aGH~~~le~ 378 (709)
|+++|.+. ++++.+.+. +++++++++ ||.+..+.
T Consensus 154 D~~vp~~~-~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~~ 191 (203)
T d2r8ba1 154 DPICPVQL-TKALEESLKAQGGTVETVWHPG-GHEIRSGE 191 (203)
T ss_dssp CTTSCHHH-HHHHHHHHHHHSSEEEEEEESS-CSSCCHHH
T ss_pred CCcccHHH-HHHHHHHHHHCCCCEEEEEECC-CCcCCHHH
Confidence 99999997 877776543 468888986 89876443
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.7e-14 Score=140.67 Aligned_cols=99 Identities=17% Similarity=0.274 Sum_probs=75.5
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCC-----------------CC--------CHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKD-----------------RT--------SFTGLVKLVEST 184 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G-----------------~S--------s~~~~~~dl~~~ 184 (709)
..++|||+||+|++...|..+...+ ..++.+++++-|.+. .+ .+++..+.+..+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~l 99 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 99 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 4568999999999999999888887 477889888765321 00 124445556666
Q ss_pred HHHhhcc-CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 185 VRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 185 l~~~~~~-~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
++..... .+..+++++|+|+||.+|+.++.++|+.++++|.+++.
T Consensus 100 i~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~ 145 (229)
T d1fj2a_ 100 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCW 145 (229)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCC
T ss_pred hhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccc
Confidence 6654433 34578999999999999999999999999999998764
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.54 E-value=4.1e-14 Score=135.73 Aligned_cols=111 Identities=15% Similarity=0.142 Sum_probs=81.7
Q ss_pred ccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCC-----CC------C--CHHHHH---HHHH
Q 005190 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVK-----DR------T--SFTGLV---KLVE 182 (709)
Q Consensus 119 ~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~-----G~------S--s~~~~~---~dl~ 182 (709)
++.|+..+...++.|+||++||++++...|..+.+.|..++.+++++.+.. +. + +.++.. +++.
T Consensus 10 ~~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (209)
T d3b5ea1 10 AFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFA 89 (209)
T ss_dssp SSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHH
T ss_pred cceeEecCCCCCCCCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHH
Confidence 334444333345689999999999999999999999998999998865421 11 0 333333 3444
Q ss_pred HHHHHhhcc--CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 183 STVRSESNR--SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 183 ~~l~~~~~~--~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
++|+.+..+ .+.++++++|||+||.+++.++.++|+.++++|++++.
T Consensus 90 ~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~ 138 (209)
T d3b5ea1 90 AFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPM 138 (209)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCC
T ss_pred HHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCc
Confidence 455554443 24578999999999999999999999999999999874
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.54 E-value=6e-14 Score=143.89 Aligned_cols=207 Identities=13% Similarity=0.004 Sum_probs=123.8
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCCCH------------------
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSF------------------ 174 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~Ss~------------------ 174 (709)
||..+.-..|...+. ....|+||++||++.+...+.......++||.|+++|+||||.|..
T Consensus 64 dG~~l~~~l~~P~~~-~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~ 142 (322)
T d1vlqa_ 64 RGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPG 142 (322)
T ss_dssp GGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSS
T ss_pred CCcEEEEEEEeccCC-CCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccccccccc
Confidence 454443333443332 2246789999999888777765544446899999999999998810
Q ss_pred --------------HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhh
Q 005190 175 --------------TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ 238 (709)
Q Consensus 175 --------------~~~~~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~ 238 (709)
.....|+...++.+..+.. ..++.++|+|+||.+++.++...| .++++|...+.........
T Consensus 143 ~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~~~~~- 220 (322)
T d1vlqa_ 143 FMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRRAV- 220 (322)
T ss_dssp STTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHHHH-
T ss_pred hhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccHHHHH-
Confidence 2234566666666554432 356999999999999998888766 4777777665433211100
Q ss_pred hhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHH
Q 005190 239 STIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLK 318 (709)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (709)
................ . .............
T Consensus 221 ------~~~~~~~~~~~~~~~~---------------~-----------------------------~~~~~~~~~~~~~ 250 (322)
T d1vlqa_ 221 ------QLVDTHPYAEITNFLK---------------T-----------------------------HRDKEEIVFRTLS 250 (322)
T ss_dssp ------HHCCCTTHHHHHHHHH---------------H-----------------------------CTTCHHHHHHHHH
T ss_pred ------hhccccchhhHHhhhh---------------c-----------------------------CcchhhhHHHHhh
Confidence 0000000000000000 0 0000000000000
Q ss_pred HhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC-CcEEEEEcCCCcccc
Q 005190 319 AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLL 375 (709)
Q Consensus 319 ~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~-~~~~~~i~~aGH~~~ 375 (709)
..+....+.++++|+|+++|++|.++|++. +..+.+.++ ..+++++|++||...
T Consensus 251 --~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~-~~~~~~~~~~~~~l~~~p~~~H~~~ 305 (322)
T d1vlqa_ 251 --YFDGVNFAARAKIPALFSVGLMDNICPPST-VFAAYNYYAGPKEIRIYPYNNHEGG 305 (322)
T ss_dssp --TTCHHHHHTTCCSCEEEEEETTCSSSCHHH-HHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred --hhhHHHHHhcCCCCEEEEEeCCCCCcCHHH-HHHHHHHCCCCeEEEEECCCCCCCc
Confidence 001123356789999999999999999997 777776665 588999999999653
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.54 E-value=5.8e-14 Score=133.81 Aligned_cols=155 Identities=18% Similarity=0.197 Sum_probs=115.3
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-------------CHHHH---HHHHHHHHHHhhccC-
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------------SFTGL---VKLVESTVRSESNRS- 192 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-------------s~~~~---~~dl~~~l~~~~~~~- 192 (709)
++.|+||++||++++...|..+.+.+++++.|++++.+..+.. +.++. .+++..+++.+....
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYK 91 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3688999999999999999999999999999999976544332 33333 334555555544433
Q ss_pred -CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHH
Q 005190 193 -PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (709)
Q Consensus 193 -~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (709)
...+++++|+|+||.+++.+|..+|+.+.++++.++.......
T Consensus 92 ~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 135 (202)
T d2h1ia1 92 FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM------------------------------------ 135 (202)
T ss_dssp CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC------------------------------------
T ss_pred ccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccc------------------------------------
Confidence 3568999999999999999999999999999998774321000
Q ss_pred HHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005190 272 DNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 351 (709)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~ 351 (709)
........|+++++|++|.++|++.
T Consensus 136 ------------------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~- 160 (202)
T d2h1ia1 136 ------------------------------------------------------QLANLAGKSVFIAAGTNDPICSSAE- 160 (202)
T ss_dssp ------------------------------------------------------CCCCCTTCEEEEEEESSCSSSCHHH-
T ss_pred ------------------------------------------------------cccccccchhhcccccCCCccCHHH-
Confidence 0012346799999999999999986
Q ss_pred HHHHHhhcC----CcEEEEEcCCCccccc
Q 005190 352 GERLSSALH----KCEPRNFYGHGHFLLL 376 (709)
Q Consensus 352 ~~~l~~~~~----~~~~~~i~~aGH~~~l 376 (709)
++++.+.+. +++++.+++ ||.+..
T Consensus 161 ~~~~~~~l~~~g~~~~~~~~~g-gH~~~~ 188 (202)
T d2h1ia1 161 SEELKVLLENANANVTMHWENR-GHQLTM 188 (202)
T ss_dssp HHHHHHHHHTTTCEEEEEEESS-TTSCCH
T ss_pred HHHHHHHHHHCCCCEEEEEECC-CCcCCH
Confidence 777776544 478888985 898753
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.52 E-value=3.4e-15 Score=128.32 Aligned_cols=88 Identities=16% Similarity=0.148 Sum_probs=74.6
Q ss_pred cccccccCCCCCCCCCEEEEeCCCCCCcccHHHHHHHhcCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccC
Q 005190 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRS 192 (709)
Q Consensus 118 ~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~ 192 (709)
.-++|.+.|+ +|+|||+||.. ..+.+.|+++|+|+++|+||||.| +.+++++++.+++++ +
T Consensus 11 ~~l~y~~~G~----G~pvlllHG~~------~~w~~~L~~~yrvi~~DlpG~G~S~~p~~s~~~~a~~i~~ll~~----L 76 (122)
T d2dsta1 11 LNLVFDRVGK----GPPVLLVAEEA------SRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVM----M 76 (122)
T ss_dssp EEEEEEEECC----SSEEEEESSSG------GGCCSCCCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHH----T
T ss_pred EEEEEEEEcC----CCcEEEEeccc------ccccccccCCeEEEEEeccccCCCCCcccccchhHHHHHHHHHH----h
Confidence 3577888887 78899999843 233566789999999999999999 789999999999998 5
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCc
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDI 219 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~ 219 (709)
+.++.+++||||||.+++.+|+..++.
T Consensus 77 ~i~~~~viG~S~Gg~ia~~laa~~~~~ 103 (122)
T d2dsta1 77 NLGAPWVLLRGLGLALGPHLEALGLRA 103 (122)
T ss_dssp TCCSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred CCCCcEEEEeCccHHHHHHHHhhcccc
Confidence 677899999999999999999976543
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.50 E-value=1.1e-13 Score=139.60 Aligned_cols=103 Identities=13% Similarity=-0.016 Sum_probs=88.8
Q ss_pred CCCCCEEEEeCCCCCCccc--HHHHHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005190 129 TRDSPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~G 205 (709)
....++|||+||++++... |..+.+.| +.||+|+.+|++|+|.++.+..++++.+.++.+.+..+.+++.|||||||
T Consensus 28 ~~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~sae~la~~i~~v~~~~g~~kV~lVGhS~G 107 (317)
T d1tcaa_ 28 SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQG 107 (317)
T ss_dssp TSCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHH
T ss_pred CCCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchHhHHHHHHHHHHHHHHhccCCceEEEEeCch
Confidence 3345679999999988765 55688888 47899999999999999998889999999998888888899999999999
Q ss_pred HHHHHHHHHhCC---CceeEEEEecCCCC
Q 005190 206 ACIALAVAARNP---DIDLVLILVNPATS 231 (709)
Q Consensus 206 G~iAl~~A~~~P---~~v~~lVl~~p~~~ 231 (709)
|.++..++..+| +.|..+|.+++...
T Consensus 108 G~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 108 GLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 999999999987 46999999988543
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.50 E-value=9.2e-17 Score=164.39 Aligned_cols=86 Identities=10% Similarity=0.004 Sum_probs=59.4
Q ss_pred CCCEEEEeCCCCCCcccHHH-------HHHHh-cCCceEEEEeCCCCCCCCHHH-------HHHHHHHHHHHhhccCCCC
Q 005190 131 DSPLLLFLPGIDGVGLGLIR-------QHQRL-GKIFDIWCLHIPVKDRTSFTG-------LVKLVESTVRSESNRSPKR 195 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~-------~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~-------~~~dl~~~l~~~~~~~~~~ 195 (709)
++++|||+||+++++..|.. +++.+ ++||+|+++|+||||.|+... +.+++.+.++.+. ....
T Consensus 57 ~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 134 (318)
T d1qlwa_ 57 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLF--AAGH 134 (318)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCB--CCCH
T ss_pred CCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHh--hccc
Confidence 35569999999999999864 45555 699999999999999994322 2222222222211 1134
Q ss_pred CEEEEEechhHHHHHHHHHhCCC
Q 005190 196 PVYLVGESLGACIALAVAARNPD 218 (709)
Q Consensus 196 ~v~LvGhS~GG~iAl~~A~~~P~ 218 (709)
+..++|||+||.++..++...+.
T Consensus 135 ~~~~~g~s~G~~~~~~~~~~~~~ 157 (318)
T d1qlwa_ 135 EAAWAIFRFGPRYPDAFKDTQFP 157 (318)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCSC
T ss_pred ccccccccchhHHHHHHhhhcCc
Confidence 57788999999998887766543
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.49 E-value=1.8e-13 Score=135.94 Aligned_cols=163 Identities=13% Similarity=0.122 Sum_probs=122.0
Q ss_pred CCEEEEeCCCCCCcccHHHHHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhcc------CCCCCEEEEEech
Q 005190 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR------SPKRPVYLVGESL 204 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~------~~~~~v~LvGhS~ 204 (709)
-|+||++||++++...+..+++.| +.||.|+++|.+|++... .....|+.+.++.+... ....++.++|||+
T Consensus 52 ~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~ 130 (260)
T d1jfra_ 52 FGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP-DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSM 130 (260)
T ss_dssp EEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH-HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCc-hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccc
Confidence 478999999999999999999999 489999999999987763 23344555555554432 2346799999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCCchHH
Q 005190 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (709)
Q Consensus 205 GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (709)
||.+++.++...+. +.++|.+++....
T Consensus 131 GG~~al~aa~~~~~-~~A~v~~~~~~~~---------------------------------------------------- 157 (260)
T d1jfra_ 131 GGGGSLEAAKSRTS-LKAAIPLTGWNTD---------------------------------------------------- 157 (260)
T ss_dssp HHHHHHHHHHHCTT-CSEEEEESCCCSC----------------------------------------------------
T ss_pred cchHHHHHHhhhcc-chhheeeeccccc----------------------------------------------------
Confidence 99999999988775 5566666552210
Q ss_pred HHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC---C
Q 005190 285 QDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH---K 361 (709)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~---~ 361 (709)
..+.++++|+|+++|++|.++|++...+.+.+..+ .
T Consensus 158 -----------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~ 196 (260)
T d1jfra_ 158 -----------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLD 196 (260)
T ss_dssp -----------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSC
T ss_pred -----------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCC
Confidence 11245689999999999999998653555565544 4
Q ss_pred cEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 362 CEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 362 ~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.++++++|++|+........+.+.+..|
T Consensus 197 ~~~~~i~ga~H~~~~~~~~~~~~~~~~w 224 (260)
T d1jfra_ 197 KAYLELRGASHFTPNTSDTTIAKYSISW 224 (260)
T ss_dssp EEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred EEEEEECCCccCCCCCChHHHHHHHHHH
Confidence 5788999999998877667777777755
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.48 E-value=1.2e-12 Score=129.93 Aligned_cols=89 Identities=10% Similarity=0.106 Sum_probs=71.5
Q ss_pred CCCCEEEEeCCCC-----CCcccHHHHHHHh-----cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 130 RDSPLLLFLPGID-----GVGLGLIRQHQRL-----GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 130 ~~~p~Vv~lHG~~-----~s~~~~~~~~~~L-----~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
++.|+||++||.+ .+...|..+.+.+ ..|+.|+++|+|..+...+.+..+|+.+.++++....+..+++|
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 108 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINM 108 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhhHHHHhhhhhhhcccccccccceee
Confidence 3578999999943 2344555554443 47899999999998888888888888888888877777889999
Q ss_pred EEechhHHHHHHHHHhCCC
Q 005190 200 VGESLGACIALAVAARNPD 218 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~ 218 (709)
+|||+||.+|+.+|...++
T Consensus 109 ~G~S~Gg~lal~~a~~~~~ 127 (263)
T d1vkha_ 109 VGHSVGATFIWQILAALKD 127 (263)
T ss_dssp EEETHHHHHHHHHHTGGGS
T ss_pred eccCcHHHHHHHHHHhccC
Confidence 9999999999999987654
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.43 E-value=1.2e-12 Score=129.63 Aligned_cols=176 Identities=13% Similarity=0.120 Sum_probs=123.8
Q ss_pred CCCEEEEeCCC---CCCcccHHHHHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005190 131 DSPLLLFLPGI---DGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (709)
Q Consensus 131 ~~p~Vv~lHG~---~~s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG 206 (709)
..|+|||+||. .++...|..++..| .+||.|+++|+|..+..++.+..+|+.+.++.+....+ .+++|+|||.||
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG 139 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 139 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccCchhHHHHHHHHHHHHhccc-CceEEEEcchHH
Confidence 47899999995 34556666677777 58999999999999888999999999999999888764 689999999999
Q ss_pred HHHHHHHHhCC------CceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhccCC
Q 005190 207 CIALAVAARNP------DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (709)
Q Consensus 207 ~iAl~~A~~~P------~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (709)
.+|+.++.... ..+++++.+++............. .. +..+.
T Consensus 140 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~---~~~~~-------------- 187 (261)
T d2pbla1 140 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMN---------------EK---FKMDA-------------- 187 (261)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTH---------------HH---HCCCH--------------
T ss_pred HHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhc---------------cc---ccCCH--------------
Confidence 99987765432 347888888775543211100000 00 00000
Q ss_pred chHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhhcC
Q 005190 281 QPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 360 (709)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~ 360 (709)
+.. .. ...........+|+++++|++|..++.+. ++.+.+.+
T Consensus 188 -~~~-------~~----------------------------~SP~~~~~~~~~P~li~~G~~D~~~~~~q-s~~~~~~l- 229 (261)
T d2pbla1 188 -DAA-------IA----------------------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQ-AIWLVEAW- 229 (261)
T ss_dssp -HHH-------HH----------------------------TCGGGCCCCCSCEEEEEEETTSCHHHHHH-HHHHHHHH-
T ss_pred -HHH-------HH----------------------------hCchhhcccCCCeEEEEEecCCCchHHHH-HHHHHHHh-
Confidence 000 00 00012235668999999999998887776 78888877
Q ss_pred CcEEEEEcCCCcccccc
Q 005190 361 KCEPRNFYGHGHFLLLE 377 (709)
Q Consensus 361 ~~~~~~i~~aGH~~~le 377 (709)
+++.+++++.+||-.++
T Consensus 230 ~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 230 DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp TCEEEEETTCCTTTTTG
T ss_pred CCCceEeCCCCchhHHH
Confidence 57889999999976543
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.39 E-value=2.5e-12 Score=127.32 Aligned_cols=211 Identities=14% Similarity=0.029 Sum_probs=122.2
Q ss_pred CCCCCcccccccCC-CCCCCCCEEEEeCCCCC-----CcccHHHHHHHh-cCCceEEEEeCCCCCCCCH-----------
Q 005190 113 GGGPPRWFSPLECG-SHTRDSPLLLFLPGIDG-----VGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSF----------- 174 (709)
Q Consensus 113 ~g~~~~~~~~~~~g-~p~~~~p~Vv~lHG~~~-----s~~~~~~~~~~L-~~~~~Vi~~Dl~G~G~Ss~----------- 174 (709)
+|......-+...+ ++.+.-|+||++||.++ +...+......+ .++|.|+.+|+||+|.+..
T Consensus 12 ~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~~~~~~~ 91 (258)
T d2bgra2 12 NETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLG 91 (258)
T ss_dssp TTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTT
T ss_pred CCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHhhhhhhh
Confidence 44443333344433 22334589999999421 222232333344 4799999999999876521
Q ss_pred HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhH
Q 005190 175 TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQIT 252 (709)
Q Consensus 175 ~~~~~dl~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (709)
....+++.++++++..... .+++.++|+|+||.+++.++..+|+.+...+...+............
T Consensus 92 ~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 159 (258)
T d2bgra2 92 TFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYT------------ 159 (258)
T ss_dssp SHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHH------------
T ss_pred hHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccccccccccccc------------
Confidence 1234556666776655443 24699999999999999999999999887777665433211100000
Q ss_pred HhHHHhhhhhcCchhhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccC-
Q 005190 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAV- 331 (709)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 331 (709)
... .+.. ....... ... . ........++
T Consensus 160 ---~~~----~~~~------------~~~~~~~-~~~---~----------------------------~~~~~~~~~~~ 188 (258)
T d2bgra2 160 ---ERY----MGLP------------TPEDNLD-HYR---N----------------------------STVMSRAENFK 188 (258)
T ss_dssp ---HHH----HCCC------------STTTTHH-HHH---H----------------------------SCSGGGGGGGG
T ss_pred ---chh----cccc------------cchhhHH-Hhh---c----------------------------ccccccccccc
Confidence 000 0000 0000000 000 0 0000112333
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhh----cCCcEEEEEcCCCccccc-cChhhHHHHHh
Q 005190 332 KAQMLVLCSGKDQLMPSQEEGERLSSA----LHKCEPRNFYGHGHFLLL-EDGVDLVTIIK 387 (709)
Q Consensus 332 ~~PvLvi~G~~D~~v~~~~~~~~l~~~----~~~~~~~~i~~aGH~~~l-e~p~~~~~~I~ 387 (709)
++|+|+++|++|..+|... ++++.+. -.+++++++++++|.... +....+.+.+.
T Consensus 189 ~~P~li~hG~~D~~Vp~~~-s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~ 248 (258)
T d2bgra2 189 QVEYLLIHGTADDNVHFQQ-SAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS 248 (258)
T ss_dssp GSEEEEEEETTCSSSCTHH-HHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHH
T ss_pred cCChheeeecCCCcccHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHH
Confidence 3799999999999999986 7766553 346899999999998643 34455566666
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.39 E-value=1.4e-11 Score=118.47 Aligned_cols=166 Identities=17% Similarity=0.229 Sum_probs=121.9
Q ss_pred CCCEEEEeCCC---CCCccc--HHHHHHHh-cCCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCC-CCCEE
Q 005190 131 DSPLLLFLPGI---DGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSP-KRPVY 198 (709)
Q Consensus 131 ~~p~Vv~lHG~---~~s~~~--~~~~~~~L-~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~-~~~v~ 198 (709)
..+++|++||. +++... ...++..| ..||.|+.+|+||.|.| ....-.+|..++++.+..+.. ..+++
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~aa~~~~~~~~~~~~~~~ 102 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCW 102 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHHHHHHHHHhhhhccccccccee
Confidence 46799999984 444332 44566667 48999999999999999 224455677777777765553 46899
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchhhhHHHHHhhcc
Q 005190 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (709)
++|+|+||.+++.++.+.+. +.+++++.+......
T Consensus 103 ~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~~-------------------------------------------- 137 (218)
T d2i3da1 103 VAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-------------------------------------------- 137 (218)
T ss_dssp EEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--------------------------------------------
T ss_pred EEeeehHHHHHHHHHHhhcc-ccceeeccccccccc--------------------------------------------
Confidence 99999999999999988765 456777766322100
Q ss_pred CCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhh
Q 005190 279 SLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 358 (709)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v~~~~~~~~l~~~ 358 (709)
...+....+|+|+++|++|.+++... ...+.+.
T Consensus 138 ----------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~l~~~ 170 (218)
T d2i3da1 138 ----------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKD-VNGLVEK 170 (218)
T ss_dssp ----------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHH-HHHHHHH
T ss_pred ----------------------------------------------hhhccccCCCceeeecccceecChHH-HHHHHHH
Confidence 01224457899999999999999997 6666553
Q ss_pred cC-----CcEEEEEcCCCccccccChhhHHHHHhhc
Q 005190 359 LH-----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA 389 (709)
Q Consensus 359 ~~-----~~~~~~i~~aGH~~~le~p~~~~~~I~~~ 389 (709)
.. +.++++++|++|+.. .+.+++.+.+.+|
T Consensus 171 ~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~ 205 (218)
T d2i3da1 171 LKTQKGILITHRTLPGANHFFN-GKVDELMGECEDY 205 (218)
T ss_dssp HTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHH
T ss_pred HhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHH
Confidence 32 458899999999876 5778888988865
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.37 E-value=4.6e-12 Score=123.31 Aligned_cols=155 Identities=17% Similarity=0.211 Sum_probs=109.6
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhc-CCceEEEEeCCCCCCC----------------------CHHHHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT----------------------SFTGLVKLVESTVRS 187 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~Dl~G~G~S----------------------s~~~~~~dl~~~l~~ 187 (709)
..|.||++|+..|.......+++.|+ .||.|+++|+.|.+.. +.+....|+...++.
T Consensus 27 ~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~ 106 (233)
T d1dina_ 27 PAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRY 106 (233)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 47899999988776667777888884 8999999998765442 335556777777777
Q ss_pred hhccC-CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCch
Q 005190 188 ESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (709)
Q Consensus 188 ~~~~~-~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (709)
+.... ...++.++|+|+||.+++.++... . +.+.+...+... .
T Consensus 107 l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~-~-~~~~~~~~~~~~----------------~------------------ 150 (233)
T d1dina_ 107 ARHQPYSNGKVGLVGYCLGGALAFLVAAKG-Y-VDRAVGYYGVGL----------------E------------------ 150 (233)
T ss_dssp HHTSTTEEEEEEEEEETHHHHHHHHHHHHT-C-SSEEEEESCSCG----------------G------------------
T ss_pred HHhCCCCCCceEEEEecccccceeeccccc-c-cceecccccccc----------------c------------------
Confidence 65532 235799999999999999988763 3 333333221000 0
Q ss_pred hhhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhcccCCccEEEEeeCCCCCC
Q 005190 267 LKMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 346 (709)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~v 346 (709)
. ..+...++++|+|+++|++|+++
T Consensus 151 -----------------------~---------------------------------~~~~~~~i~~Pvl~~~G~~D~~v 174 (233)
T d1dina_ 151 -----------------------K---------------------------------QLNKVPEVKHPALFHMGGQDHFV 174 (233)
T ss_dssp -----------------------G---------------------------------GGGGGGGCCSCEEEEEETTCTTS
T ss_pred -----------------------c---------------------------------chhhhhccCCcceeeecccccCC
Confidence 0 00123568899999999999999
Q ss_pred CcHHHHHHHHhhc---CCcEEEEEcCCCccccccC
Q 005190 347 PSQEEGERLSSAL---HKCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 347 ~~~~~~~~l~~~~---~~~~~~~i~~aGH~~~le~ 378 (709)
|.+. .+.+.+.. +++++++++|++|....+.
T Consensus 175 p~e~-~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~ 208 (233)
T d1dina_ 175 PAPS-RQLITEGFGANPLLQVHWYEEAGHSFARTS 208 (233)
T ss_dssp CHHH-HHHHHHHHTTCTTEEEEEETTCCTTTTCTT
T ss_pred CHHH-HHHHHHHHhcCCCEEEEEECCCCcCCCCCC
Confidence 9986 77665533 3678999999999876443
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.36 E-value=5e-13 Score=136.77 Aligned_cols=95 Identities=15% Similarity=0.169 Sum_probs=79.3
Q ss_pred CCEEEEeCCCCCCccc------HHHHHHHhc-CCceEEEEeCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 132 SPLLLFLPGIDGVGLG------LIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~------~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
+.+|||+||++++... |..+.+.|+ +||+|+++|++|+|.| ..+++++++.++++. .+.+++++
T Consensus 8 k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~~~~~l~~~i~~~~~~----~~~~~v~l 83 (319)
T d1cvla_ 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAA----TGATKVNL 83 (319)
T ss_dssp SSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTSHHHHHHHHHHHHHHH----HCCSCEEE
T ss_pred CCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccHHHHHHHHHHHHHH----hCCCCEEE
Confidence 3358999999887653 777889995 6799999999999988 346666666666655 56789999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 200 VGESLGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
|||||||.++..++..+|++++++|+++++.
T Consensus 84 vGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 84 IGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 9999999999999999999999999998754
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.31 E-value=1.7e-12 Score=130.00 Aligned_cols=95 Identities=21% Similarity=0.165 Sum_probs=77.9
Q ss_pred CCEEEEeCCCCCCccc-----HHHHHHHhc-CCceEEEEeCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005190 132 SPLLLFLPGIDGVGLG-----LIRQHQRLG-KIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (709)
Q Consensus 132 ~p~Vv~lHG~~~s~~~-----~~~~~~~L~-~~~~Vi~~Dl~G~G~S--s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS 203 (709)
+.+|||+||++++... |..+.+.|+ .||+|+++|++|+|.+ ..+++.+++.++++. .+.+++++||||
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~~a~~l~~~i~~~~~~----~g~~~v~ligHS 82 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVAL----SGQPKVNLIGHS 82 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHH----HCCSCEEEEEET
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHHHHHHHHHHHHHHHHH----cCCCeEEEEEEC
Confidence 3359999999887543 778899995 7899999999999865 445556666665554 667899999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCCC
Q 005190 204 LGACIALAVAARNPDIDLVLILVNPAT 230 (709)
Q Consensus 204 ~GG~iAl~~A~~~P~~v~~lVl~~p~~ 230 (709)
|||.++..++..+|++|+++|.++++.
T Consensus 83 ~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 83 HGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ccHHHHHHHHHHCCccceeEEEECCCC
Confidence 999999999999999999999998743
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=1.3e-11 Score=122.04 Aligned_cols=191 Identities=15% Similarity=0.076 Sum_probs=112.1
Q ss_pred CCCEEEEeCCCCCC---cccH--HHHHHHh-cCCceEEEEeCCCCCCC----------CH-HHHHHHHHHHHHHhhccCC
Q 005190 131 DSPLLLFLPGIDGV---GLGL--IRQHQRL-GKIFDIWCLHIPVKDRT----------SF-TGLVKLVESTVRSESNRSP 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s---~~~~--~~~~~~L-~~~~~Vi~~Dl~G~G~S----------s~-~~~~~dl~~~l~~~~~~~~ 193 (709)
..|+||++||.+++ ...| ......| .+||.|+++|.||.+.+ .+ ....+|+.++++.+..+..
T Consensus 30 k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~ 109 (258)
T d1xfda2 30 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 109 (258)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccchhHHHHHHHHhhhhhccccc
Confidence 45899999996322 1223 2233456 46999999999986543 11 2336677777887766543
Q ss_pred --CCCEEEEEechhHHHHHHHHHhCCC----ceeEEEEecCCCCcchhhhhhhhHHHhhchhhhHHhHHHhhhhhcCchh
Q 005190 194 --KRPVYLVGESLGACIALAVAARNPD----IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (709)
Q Consensus 194 --~~~v~LvGhS~GG~iAl~~A~~~P~----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (709)
.+++.++|||+||.+++.++...++ .+...+..++............. ..+.....+.
T Consensus 110 id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~- 173 (258)
T d1xfda2 110 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSE---------------RYLGLHGLDN- 173 (258)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHH---------------HHHCCCSSCC-
T ss_pred ccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccccc---------------ccccccccch-
Confidence 3679999999999999988876654 35555666554332111100000 0000000000
Q ss_pred hhHHHHHhhccCCchHHHHHHHhHHHhhcchhhhhhcCChhhHHHHHHHHHHhhhHhhhhccc-CCccEEEEeeCCCCCC
Q 005190 268 KMAMDNVAKRLSLQPTIQDLSQDLVALSSYLPVLADILPKETLLWKIELLKAASAYANSRLHA-VKAQMLVLCSGKDQLM 346 (709)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLvi~G~~D~~v 346 (709)
..+ .... ....+.. .++|+|+++|+.|..+
T Consensus 174 ------------------~~~-----------------~~~s--------------~~~~~~~~~~~p~Li~hG~~D~~v 204 (258)
T d1xfda2 174 ------------------RAY-----------------EMTK--------------VAHRVSALEEQQFLIIHPTADEKI 204 (258)
T ss_dssp ------------------SST-----------------TTTC--------------THHHHTSCCSCEEEEEEETTCSSS
T ss_pred ------------------HHh-----------------hccc--------------hhhhhhhhhcccccccccCCCCCc
Confidence 000 0000 0011122 3789999999999999
Q ss_pred CcHHHHHHHHhh----cCCcEEEEEcCCCcccccc-ChhhHHHHHh
Q 005190 347 PSQEEGERLSSA----LHKCEPRNFYGHGHFLLLE-DGVDLVTIIK 387 (709)
Q Consensus 347 ~~~~~~~~l~~~----~~~~~~~~i~~aGH~~~le-~p~~~~~~I~ 387 (709)
|.+. +..+.+. -.+.+++++|+++|.+... ....+.+.+.
T Consensus 205 p~~~-s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~ 249 (258)
T d1xfda2 205 HFQH-TAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII 249 (258)
T ss_dssp CHHH-HHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHH
Confidence 9886 6666543 3467899999999986543 3344555555
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.27 E-value=1.9e-11 Score=117.52 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=66.0
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHHhcC---CceEEEEeCCC--------CC-CC-------------CHHHH---HHHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPV--------KD-RT-------------SFTGL---VKLVE 182 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~Dl~G--------~G-~S-------------s~~~~---~~dl~ 182 (709)
..++||++||++++...|..+.+.|.+ .+.+++++.|. .. .+ +.+++ .+.+.
T Consensus 13 ~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~v~ 92 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHHHH
Confidence 466899999999999999999988853 35666655431 10 00 22222 23344
Q ss_pred HHHHHhhc-cCCCCCEEEEEechhHHHHHHHHHh-CCCceeEEEEecC
Q 005190 183 STVRSESN-RSPKRPVYLVGESLGACIALAVAAR-NPDIDLVLILVNP 228 (709)
Q Consensus 183 ~~l~~~~~-~~~~~~v~LvGhS~GG~iAl~~A~~-~P~~v~~lVl~~p 228 (709)
++++.... ....++++++|+|+||.+|+.++.. .+..+.++|.++.
T Consensus 93 ~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g 140 (218)
T d1auoa_ 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALST 140 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESC
T ss_pred HHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccc
Confidence 44443222 2345789999999999999988765 4667888888876
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.94 E-value=2.1e-09 Score=109.20 Aligned_cols=86 Identities=16% Similarity=0.180 Sum_probs=66.1
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~-----~~~~v~Lv 200 (709)
..|+||++||.+ ++...+..+...++ .||.|+.+|++......+....+|+.+.+..+.... ..++|+|+
T Consensus 77 ~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~ 156 (317)
T d1lzla_ 77 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVG 156 (317)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccccccccccccchhHHHHHHHHhCCCHHHEEEE
Confidence 357899999953 55666777777773 499999999999888877777777777776654321 13579999
Q ss_pred EechhHHHHHHHHHhC
Q 005190 201 GESLGACIALAVAARN 216 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~ 216 (709)
|+|.||.+++.++...
T Consensus 157 G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 157 GQSAGGGLAAGTVLKA 172 (317)
T ss_dssp EETHHHHHHHHHHHHH
T ss_pred EeccccHHHHHHHhhh
Confidence 9999999999888753
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.87 E-value=4.9e-09 Score=105.90 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=79.1
Q ss_pred ccccCCCCCCCCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCC--
Q 005190 121 SPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP-- 193 (709)
Q Consensus 121 ~~~~~g~p~~~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~-- 193 (709)
.|...+. .++.|+||++||.+ ++...+..+...++ .++.|+.+|++......+....+|+...+..+.....
T Consensus 62 ~y~P~~~-~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p~~~~D~~~~~~~l~~~~~~~ 140 (308)
T d1u4na_ 62 MYRPEGV-EPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADF 140 (308)
T ss_dssp EEECTTC-CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTTTGGG
T ss_pred EEecccc-CCCCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccccccchhhhhhhHHHHhHHhc
Confidence 3444433 23467999999964 45667777777774 3567889999988877887888888888777765332
Q ss_pred ---CCCEEEEEechhHHHHHHHHHhCC----CceeEEEEecCCCCc
Q 005190 194 ---KRPVYLVGESLGACIALAVAARNP----DIDLVLILVNPATSF 232 (709)
Q Consensus 194 ---~~~v~LvGhS~GG~iAl~~A~~~P----~~v~~lVl~~p~~~~ 232 (709)
.+++++.|+|.||.+++.++.... ..+.+..++.+....
T Consensus 141 ~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
T d1u4na_ 141 HLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 186 (308)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCC
T ss_pred CCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccccc
Confidence 357999999999999988876543 235667777775544
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.85 E-value=1.5e-08 Score=104.60 Aligned_cols=119 Identities=17% Similarity=-0.035 Sum_probs=80.9
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCC---Ccc--cHHHHHHHh-cCCceEEEEeCCCCC----CCCHHHHHHHHH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDG---VGL--GLIRQHQRL-GKIFDIWCLHIPVKD----RTSFTGLVKLVE 182 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~---s~~--~~~~~~~~L-~~~~~Vi~~Dl~G~G----~Ss~~~~~~dl~ 182 (709)
||..+.-..|...+. ....|+||++||.+- +.. .+..++..+ ..++.|+.+|+|..+ ...+....+|+.
T Consensus 88 dg~~i~~~iy~P~~~-~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~~l~D~~ 166 (358)
T d1jkma_ 88 DGNEITLHVFRPAGV-EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCL 166 (358)
T ss_dssp TSCEEEEEEEEETTC-CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHH
T ss_pred CCCEEEEEEEecCCC-CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCCCchhhHHHH
Confidence 454444444554443 234678999999743 322 345566777 478999999999873 335667777777
Q ss_pred HHHHHhhc---cCCCCCEEEEEechhHHHHHHHHHh-----CCCceeEEEEecCCCCc
Q 005190 183 STVRSESN---RSPKRPVYLVGESLGACIALAVAAR-----NPDIDLVLILVNPATSF 232 (709)
Q Consensus 183 ~~l~~~~~---~~~~~~v~LvGhS~GG~iAl~~A~~-----~P~~v~~lVl~~p~~~~ 232 (709)
+.++++.. ..+..+++|+|+|.||.+|+.++.. ....+.++++..|....
T Consensus 167 ~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 167 AAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred HHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 77776653 2345789999999999999877654 23457788888886553
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.83 E-value=1.7e-08 Score=101.96 Aligned_cols=102 Identities=19% Similarity=0.218 Sum_probs=75.6
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHh-c-CCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRL-G-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLV 200 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L-~-~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~-----~~~~v~Lv 200 (709)
+.|+||++||.+ ++...+..++..+ + .++.|+.+|+|......+....+|+...++.+.... ...+++++
T Consensus 78 ~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~ 157 (311)
T d1jjia_ 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccccchhhhhhhhhhhHHHHhHHHhCcChhHEEEE
Confidence 478999999974 5566667777776 3 589999999998877777777777777666655422 13579999
Q ss_pred EechhHHHHHHHHHhC----CCceeEEEEecCCCCc
Q 005190 201 GESLGACIALAVAARN----PDIDLVLILVNPATSF 232 (709)
Q Consensus 201 GhS~GG~iAl~~A~~~----P~~v~~lVl~~p~~~~ 232 (709)
|+|.||.+++.++... .....+.+++.|....
T Consensus 158 G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~ 193 (311)
T d1jjia_ 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred eeecCCcceeechhhhhhccccccceeeeecceeee
Confidence 9999999988776542 3446778888886654
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.83 E-value=2.5e-08 Score=97.50 Aligned_cols=104 Identities=14% Similarity=0.139 Sum_probs=62.6
Q ss_pred CCCCCCEEEEeCCCCCCcccHHH-------HHHHh-cC----CceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005190 128 HTRDSPLLLFLPGIDGVGLGLIR-------QHQRL-GK----IFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (709)
Q Consensus 128 p~~~~p~Vv~lHG~~~s~~~~~~-------~~~~L-~~----~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~ 188 (709)
+.+.-|+|+++||.+++...|.. ....+ .. .+.+...+....... ....+.+++...++..
T Consensus 48 ~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~i~~~ 127 (255)
T d1jjfa_ 48 KDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESN 127 (255)
T ss_dssp TTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHH
T ss_pred CCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccccccccccccchHHHHHHHHHHHHHHh
Confidence 34457899999999887765532 22222 11 123333222221111 1233444444444432
Q ss_pred hcc-CCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 189 SNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 189 ~~~-~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
... ...++++++|+|+||..++.+|.++|+++++++.+++...
T Consensus 128 ~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 128 YSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 171 (255)
T ss_dssp SCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred hccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcC
Confidence 211 2245799999999999999999999999999999887543
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=98.82 E-value=2.1e-09 Score=110.67 Aligned_cols=118 Identities=9% Similarity=-0.090 Sum_probs=80.7
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcc-c---HHHHHHHh-cCCceEEEEeCCCCCCC-----CHHHHHHHHH
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL-G---LIRQHQRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVE 182 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~-~---~~~~~~~L-~~~~~Vi~~Dl~G~G~S-----s~~~~~~dl~ 182 (709)
||....--.|+..+. ..-|+||+.||++.... . +......| .+||.|+++|.||+|.| .......|..
T Consensus 14 DGv~L~~~vy~P~~~--~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~~~d~~ 91 (347)
T d1ju3a2 14 DGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDEADAE 91 (347)
T ss_dssp TSCEEEEEEEEECCS--SCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHHHHHH
T ss_pred CCCEEEEEEEEcCCC--CCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccchhhhHH
Confidence 565444444555443 23678999999875332 1 12234445 58999999999999999 2223334555
Q ss_pred HHHHHhhccC-CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 183 STVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 183 ~~l~~~~~~~-~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
++++.+..+- .+.+|.++|+|+||.+++.+|+..|..++++|...+....
T Consensus 92 d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 92 DTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred HHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 5555544322 2468999999999999999999999999999888776543
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.80 E-value=1.8e-07 Score=92.07 Aligned_cols=119 Identities=12% Similarity=0.032 Sum_probs=68.9
Q ss_pred CCCCCcccccccCC-CCCCCCCEEEEeCCCCCCccc---HHHHHHHhc-CCceEEEEeCCCCCCC-----------CHHH
Q 005190 113 GGGPPRWFSPLECG-SHTRDSPLLLFLPGIDGVGLG---LIRQHQRLG-KIFDIWCLHIPVKDRT-----------SFTG 176 (709)
Q Consensus 113 ~g~~~~~~~~~~~g-~p~~~~p~Vv~lHG~~~s~~~---~~~~~~~L~-~~~~Vi~~Dl~G~G~S-----------s~~~ 176 (709)
||..+...-+...+ ++.+..|+||++||.++.... .......+. .++-+...+..+.... ....
T Consensus 16 DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (280)
T d1qfma2 16 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQN 95 (280)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHH
T ss_pred CCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhccccccccc
Confidence 55544322344443 234457899999996543322 222333333 4556666666555433 1122
Q ss_pred HHHHHHHHHHHhh--ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 177 LVKLVESTVRSES--NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 177 ~~~dl~~~l~~~~--~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
..++......... .........+.|+|.||..+...+...++.+.+++...+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (280)
T d1qfma2 96 CFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 152 (280)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred ccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccc
Confidence 2233332222222 223356789999999999999999999999888888777554
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=98.67 E-value=5.9e-08 Score=100.86 Aligned_cols=117 Identities=12% Similarity=0.060 Sum_probs=83.0
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCCcc-------cHH----HHHHHh-cCCceEEEEeCCCCCCC--CH----
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL-------GLI----RQHQRL-GKIFDIWCLHIPVKDRT--SF---- 174 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s~~-------~~~----~~~~~L-~~~~~Vi~~Dl~G~G~S--s~---- 174 (709)
||....-..|+..+. ..-|+||+.|+++.+.. .+. ...+.| .+||.|+.+|.||+|.| .+
T Consensus 33 DG~~L~~~v~~P~~~--~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~ 110 (381)
T d1mpxa2 33 DGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTR 110 (381)
T ss_dssp TSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTC
T ss_pred CCCEEEEEEEEeCCC--CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCceeccc
Confidence 565444444555443 24678999998754211 111 133445 58999999999999998 11
Q ss_pred ----------HHHHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 175 ----------TGLVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 175 ----------~~~~~dl~~~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+.++|..++++.+..+. ...+|.++|+|+||.+++.+|...|..++++|..++...
T Consensus 111 ~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 111 PLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred hhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 235678888888775543 346899999999999999999999999999999887654
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.59 E-value=6.5e-07 Score=93.59 Aligned_cols=98 Identities=10% Similarity=-0.003 Sum_probs=71.1
Q ss_pred EEEeCCCCCCcc-cHH-HHHHHh-cCCceEEEEeCCCCCCC--CH----HHHHHHHHHHHHHhhccC-------------
Q 005190 135 LLFLPGIDGVGL-GLI-RQHQRL-GKIFDIWCLHIPVKDRT--SF----TGLVKLVESTVRSESNRS------------- 192 (709)
Q Consensus 135 Vv~lHG~~~s~~-~~~-~~~~~L-~~~~~Vi~~Dl~G~G~S--s~----~~~~~dl~~~l~~~~~~~------------- 192 (709)
+-.+|+...+.. .|. ...+.| .+||.|+.+|.||.|.| .+ .+-.+|..++|+.+..+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~ 189 (405)
T d1lnsa3 110 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIK 189 (405)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEEC
T ss_pred ccccccccccccccccccchHHHHhCCCEEEEECCCCCCCCCCccccCChhhhhhHHHHHHHHHhccccccccccccccc
Confidence 445566543332 111 233455 68999999999999999 11 344678888888865421
Q ss_pred ---CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 193 ---PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 193 ---~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
.+.+|.++|+|+||.+++.+|+..|..++++|..++....
T Consensus 190 q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~ 232 (405)
T d1lnsa3 190 ASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSW 232 (405)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBH
T ss_pred ccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccH
Confidence 1347999999999999999999999999999988876653
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.56 E-value=8.7e-08 Score=95.71 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=71.7
Q ss_pred CCCEEEEeCCCCCCccc-H-HHHHHHh-c-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCCCE
Q 005190 131 DSPLLLFLPGIDGVGLG-L-IRQHQRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~-~-~~~~~~L-~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~~--~~~~~v 197 (709)
+.|++|++|||.++... | ..+...+ . ..++|+++|+...... ......+.+..+++.+... ...+++
T Consensus 69 ~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (337)
T d1rp1a2 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (337)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhe
Confidence 58899999999877653 3 3344444 3 5699999999654322 2344556666666654432 345789
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+|||||+||.+|-.++ ++...+..++.++|+.+.
T Consensus 149 hlIGhSLGAhvAG~aG-~~~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 149 QLIGHSLGAHVAGEAG-SRTPGLGRITGLDPVEAS 182 (337)
T ss_dssp EEEEETHHHHHHHHHH-HTSTTCCEEEEESCCCTT
T ss_pred EEEeecHHHhhhHHHH-HhhccccceeccCCCccc
Confidence 9999999999997555 455678999999997764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.56 E-value=1e-06 Score=87.43 Aligned_cols=101 Identities=15% Similarity=0.065 Sum_probs=70.5
Q ss_pred CCCEEEEeCCCCCCc--ccHHH---HHHHh-cCCceEEEEeCCCCCCC----------------CHH-HHHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGVG--LGLIR---QHQRL-GKIFDIWCLHIPVKDRT----------------SFT-GLVKLVESTVRS 187 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~--~~~~~---~~~~L-~~~~~Vi~~Dl~G~G~S----------------s~~-~~~~dl~~~l~~ 187 (709)
..|+|+++||.+++. ..|.. +.+.+ ..++.+++++..+.+.. .++ .+.+++...++.
T Consensus 33 ~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 112 (288)
T d1sfra_ 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (288)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHH
Confidence 588999999987654 34443 23444 36788889987665433 122 234455555544
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
... ....++.+.|+||||..|+.+|.++|+++.+++.+++....
T Consensus 113 ~~~-~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 113 NRH-VKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (288)
T ss_dssp HHC-BCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred hcC-CCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccc
Confidence 222 23457999999999999999999999999999999886543
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.52 E-value=1.3e-07 Score=92.07 Aligned_cols=94 Identities=20% Similarity=0.164 Sum_probs=69.1
Q ss_pred EEEEeCCCCCCc---ccHHHHHHHhc---CCceEEEEeCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005190 134 LLLFLPGIDGVG---LGLIRQHQRLG---KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (709)
Q Consensus 134 ~Vv~lHG~~~s~---~~~~~~~~~L~---~~~~Vi~~Dl~G~G~S--------s~~~~~~dl~~~l~~~~~~~~~~~v~L 199 (709)
+||++||++++. ..+..+.+.+. .++.|+++++.....+ ..++.++.+.+.++... ...+++.+
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~--~~~~~v~l 84 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDP--KLQQGYNA 84 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCG--GGTTCEEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhcc--ccccceeE
Confidence 699999998764 35777777774 4889999998665433 33555555555554421 12357999
Q ss_pred EEechhHHHHHHHHHhCCC-ceeEEEEecCC
Q 005190 200 VGESLGACIALAVAARNPD-IDLVLILVNPA 229 (709)
Q Consensus 200 vGhS~GG~iAl~~A~~~P~-~v~~lVl~~p~ 229 (709)
|||||||.++-.++.++++ .|..+|.++++
T Consensus 85 VGhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp EEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred EEEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 9999999999999999875 48889988764
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.51 E-value=1.3e-07 Score=94.20 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=76.1
Q ss_pred CCCEEEEeCCCCCCccc-HH-HHHHHh-c-CCceEEEEeCCCCCCC-------CHHHHHHHHHHHHHHhhc--cCCCCCE
Q 005190 131 DSPLLLFLPGIDGVGLG-LI-RQHQRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN--RSPKRPV 197 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~-~~-~~~~~L-~-~~~~Vi~~Dl~G~G~S-------s~~~~~~dl~~~l~~~~~--~~~~~~v 197 (709)
+.|++|++|||.++... |. .+...+ . ..++|+++|+...... ......+.+..+|+.+.. ....+++
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCccee
Confidence 58899999999776653 33 344444 3 5699999999654332 335555666667666543 2446889
Q ss_pred EEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+|||||+||.+|-.++...+.++..++.++|+.+.
T Consensus 149 hlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred EEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 99999999999999999888899999999997664
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.50 E-value=8.3e-08 Score=93.20 Aligned_cols=101 Identities=13% Similarity=0.015 Sum_probs=60.0
Q ss_pred CCCCEEEEeCCCCC--CcccHHHHHHHh-cCC----ceEEEEeCCCCCCC--------CH-HHHHHHHHHHHHHhhcc-C
Q 005190 130 RDSPLLLFLPGIDG--VGLGLIRQHQRL-GKI----FDIWCLHIPVKDRT--------SF-TGLVKLVESTVRSESNR-S 192 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~--s~~~~~~~~~~L-~~~----~~Vi~~Dl~G~G~S--------s~-~~~~~dl~~~l~~~~~~-~ 192 (709)
+..|+||++||.+. ....+. ....+ +++ +-++.++....+.- .+ +.+.+++..+++..... .
T Consensus 42 ~~~Pvvv~lhG~~~~~~~~~~~-~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~~~~~ 120 (246)
T d3c8da2 42 EERPLAVLLDGEFWAQSMPVWP-VLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSD 120 (246)
T ss_dssp CCCCEEEESSHHHHHHTSCCHH-HHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCC
T ss_pred CCCCEEEEeCCcchhccCcHHH-HHHHHHHhCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHHHhccccc
Confidence 35789999999532 122333 33444 333 22333332111100 11 22334444444442221 1
Q ss_pred CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 193 ~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
..+++.++|+||||..|+.++.++|+.+++++.+++...
T Consensus 121 d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~ 159 (246)
T d3c8da2 121 RADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 159 (246)
T ss_dssp CGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred CccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccc
Confidence 236799999999999999999999999999999988554
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.31 E-value=4.8e-06 Score=81.38 Aligned_cols=102 Identities=9% Similarity=-0.022 Sum_probs=65.9
Q ss_pred CCCCEEEEeCCCCCCcccH-------HHHHHHh-----cCCceEEEEeCCCCCCC--C-HHHHHHHHHHHHHHhh-----
Q 005190 130 RDSPLLLFLPGIDGVGLGL-------IRQHQRL-----GKIFDIWCLHIPVKDRT--S-FTGLVKLVESTVRSES----- 189 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~-------~~~~~~L-----~~~~~Vi~~Dl~G~G~S--s-~~~~~~dl~~~l~~~~----- 189 (709)
+.-|+|+++||.+++...| ......+ ...+.|+.++..+.+.. . .....+.+...++...
T Consensus 53 k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (273)
T d1wb4a1 53 KKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAE 132 (273)
T ss_dssp SCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHHHHHSCCSCS
T ss_pred CCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCccccchhcccccccchhhhhhhhhhh
Confidence 3568999999998765443 2222232 24577888887664433 1 1222223222222210
Q ss_pred ------ccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 190 ------NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 190 ------~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.....+++.+.|+|+||..++.+|.++|+++.+++.+++...
T Consensus 133 ~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~ 180 (273)
T d1wb4a1 133 STTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 180 (273)
T ss_dssp SCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred hhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccc
Confidence 012346799999999999999999999999999999988554
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=1.7e-05 Score=83.71 Aligned_cols=103 Identities=18% Similarity=0.115 Sum_probs=74.7
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHH-----------h-------cCCceEEEEeCC-CCCCC---------CHHHHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQR-----------L-------GKIFDIWCLHIP-VKDRT---------SFTGLVKLV 181 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~-----------L-------~~~~~Vi~~Dl~-G~G~S---------s~~~~~~dl 181 (709)
.+.|++|++-|.+|++..|..+.+. + .+..+++-+|.| |.|.| +..+.+.|+
T Consensus 46 ~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~~~~~~~~~~a~d~ 125 (452)
T d1ivya_ 46 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSN 125 (452)
T ss_dssp GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccccCCCCCCCCCcHHHHHHH
Confidence 4689999999999999888665432 1 123689999975 99998 335556665
Q ss_pred HHHHHHhhccC---CCCCEEEEEechhHHHHHHHHHh----CCCceeEEEEecCCCCc
Q 005190 182 ESTVRSESNRS---PKRPVYLVGESLGACIALAVAAR----NPDIDLVLILVNPATSF 232 (709)
Q Consensus 182 ~~~l~~~~~~~---~~~~v~LvGhS~GG~iAl~~A~~----~P~~v~~lVl~~p~~~~ 232 (709)
.+++..+.... ...+++|.|.|+||.-+-.+|.. ..-.++|+++.++....
T Consensus 126 ~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~d~ 183 (452)
T d1ivya_ 126 FEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSY 183 (452)
T ss_dssp HHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBH
T ss_pred HHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCccCc
Confidence 55554443333 35699999999999988888764 22348999999997764
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.17 E-value=0.00011 Score=76.48 Aligned_cols=103 Identities=15% Similarity=-0.007 Sum_probs=75.8
Q ss_pred CCCCEEEEeCCCCCCcccHHHHHHH----------h-------cCCceEEEEe-CCCCCCC--------CHHHHHHHHHH
Q 005190 130 RDSPLLLFLPGIDGVGLGLIRQHQR----------L-------GKIFDIWCLH-IPVKDRT--------SFTGLVKLVES 183 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~~~~~~~~~~----------L-------~~~~~Vi~~D-l~G~G~S--------s~~~~~~dl~~ 183 (709)
...|+||.+-|.+|++..+..+.+. + .+..+++.+| ..|.|.| +-.+.++|+.+
T Consensus 42 ~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~ 121 (421)
T d1wpxa1 42 AKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYN 121 (421)
T ss_dssp TTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceecCCccccchHHHHHHHHH
Confidence 4679999999999998888766531 1 1347899999 5599998 34556666666
Q ss_pred HHHHhhccCC-----CCCEEEEEechhHHHHHHHHHhC------CCceeEEEEecCCCCc
Q 005190 184 TVRSESNRSP-----KRPVYLVGESLGACIALAVAARN------PDIDLVLILVNPATSF 232 (709)
Q Consensus 184 ~l~~~~~~~~-----~~~v~LvGhS~GG~iAl~~A~~~------P~~v~~lVl~~p~~~~ 232 (709)
++..+....+ ..+++|.|.|+||..+-.+|..- +-.++|+++.++....
T Consensus 122 fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~dp 181 (421)
T d1wpxa1 122 FLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp HHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCCH
T ss_pred HHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCcccc
Confidence 6665555443 35899999999999988887542 2237899999997653
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.15 E-value=1e-05 Score=79.67 Aligned_cols=101 Identities=12% Similarity=-0.001 Sum_probs=70.9
Q ss_pred CCCEEEEeCCCCCC--cccHHH---HHHHh-cCCceEEEEeCCCCCCC----------------CHHH-HHHHHHHHHHH
Q 005190 131 DSPLLLFLPGIDGV--GLGLIR---QHQRL-GKIFDIWCLHIPVKDRT----------------SFTG-LVKLVESTVRS 187 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s--~~~~~~---~~~~L-~~~~~Vi~~Dl~G~G~S----------------s~~~-~~~dl~~~l~~ 187 (709)
+.|+|+|+||.++. ...|.. +.+.+ ..++.|+.+|--..+.. .+++ +.+++...|+.
T Consensus 28 ~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 107 (280)
T d1dqza_ 28 GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQA 107 (280)
T ss_dssp SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHH
Confidence 46899999998763 456664 33344 36789999984321110 2333 35666666655
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 188 ~~~~~~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
... ...+++++.|+||||..|+.+|.++|+++++++.+++....
T Consensus 108 ~~~-~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 108 NKG-VSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHC-CCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred hcC-CCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCc
Confidence 332 23457899999999999999999999999999999886653
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.14 E-value=6.7e-06 Score=85.01 Aligned_cols=117 Identities=15% Similarity=0.028 Sum_probs=81.4
Q ss_pred CCCCCcccccccCCCCCCCCCEEEEeCCCCCC--------ccc----HHHHHHHh-cCCceEEEEeCCCCCCC--CH---
Q 005190 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGV--------GLG----LIRQHQRL-GKIFDIWCLHIPVKDRT--SF--- 174 (709)
Q Consensus 113 ~g~~~~~~~~~~~g~p~~~~p~Vv~lHG~~~s--------~~~----~~~~~~~L-~~~~~Vi~~Dl~G~G~S--s~--- 174 (709)
||....--.|+..+. ..-|+||+.|+++.. ... .......| ++||.|+.+|.||+|.| .+
T Consensus 37 DG~~L~~~v~~P~~~--~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~ 114 (385)
T d2b9va2 37 DGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMT 114 (385)
T ss_dssp TSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTT
T ss_pred CCCEEEEEEEEcCCC--CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCCceeec
Confidence 665544444555443 246678887876421 111 11233445 58999999999999999 11
Q ss_pred -----------HHHHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 005190 175 -----------TGLVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (709)
Q Consensus 175 -----------~~~~~dl~~~l~~~~~~~--~~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~ 231 (709)
.+-++|..++++.+..+. ...+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 115 ~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 115 RPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred cccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 124688888888876543 246899999999999999999999999998888776544
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.10 E-value=1.8e-05 Score=77.09 Aligned_cols=101 Identities=15% Similarity=0.025 Sum_probs=69.2
Q ss_pred CCCEEEEeCCCCCC--cccHHH---HHHHh-cCCceEEEEeCCCCC-CC--------CHHH-HHHHHHHHHHHhhccCCC
Q 005190 131 DSPLLLFLPGIDGV--GLGLIR---QHQRL-GKIFDIWCLHIPVKD-RT--------SFTG-LVKLVESTVRSESNRSPK 194 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s--~~~~~~---~~~~L-~~~~~Vi~~Dl~G~G-~S--------s~~~-~~~dl~~~l~~~~~~~~~ 194 (709)
+.|+|+++||.++. ...|.. +.+.. ..++-|+.+|--..+ .+ .+++ +.+++...|+.... ...
T Consensus 26 ~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~~-~d~ 104 (267)
T d1r88a_ 26 GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRG-LAP 104 (267)
T ss_dssp SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSC-CCS
T ss_pred CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhcC-CCC
Confidence 36899999998664 345665 33434 367888888742111 11 3433 33456665554322 234
Q ss_pred CCEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCc
Q 005190 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (709)
Q Consensus 195 ~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~~~~ 232 (709)
+++.+.|+||||..|+.+|.++|+.+++++.+++....
T Consensus 105 ~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~ 142 (267)
T d1r88a_ 105 GGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 142 (267)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred CceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCC
Confidence 67999999999999999999999999999999886654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.04 E-value=3.3e-06 Score=86.03 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=72.5
Q ss_pred CCCEEEEeCCCCCCc-------ccHHH----HHHHh-cCCceEEEEeCCCCCCCCHHHHHHHHHHHHHHhhccCC-----
Q 005190 131 DSPLLLFLPGIDGVG-------LGLIR----QHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP----- 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~-------~~~~~----~~~~L-~~~~~Vi~~Dl~G~G~Ss~~~~~~dl~~~l~~~~~~~~----- 193 (709)
++-+|||+||+.|-. ..|.. +.+.| .+|++|++......+ |.++=++.+...|+......+
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~--S~~~RA~eL~~~I~~~~~d~G~~hs~ 83 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS--SNWDRACEAYAQLVGGTVDYGAAHAA 83 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB--CHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc--CHHHHHHHHHHHHhhhhhhhhHhHHh
Confidence 345699999986542 24543 67778 589999999987654 777777777777775443332
Q ss_pred --------------------CCCEEEEEechhHHHHHHHHHhCC-------------------------CceeEEEEecC
Q 005190 194 --------------------KRPVYLVGESLGACIALAVAARNP-------------------------DIDLVLILVNP 228 (709)
Q Consensus 194 --------------------~~~v~LvGhS~GG~iAl~~A~~~P-------------------------~~v~~lVl~~p 228 (709)
..||+||||||||..+-.++...| +.|++|+-+++
T Consensus 84 ~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsT 163 (388)
T d1ku0a_ 84 KHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIAT 163 (388)
T ss_dssp HHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccC
Confidence 258999999999999988886543 36999999887
Q ss_pred CCC
Q 005190 229 ATS 231 (709)
Q Consensus 229 ~~~ 231 (709)
+-.
T Consensus 164 PH~ 166 (388)
T d1ku0a_ 164 PHD 166 (388)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.96 E-value=5.3e-05 Score=74.74 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=65.9
Q ss_pred CCCEEEEeCCCCCCcccHHHHH--HHh--cCCceEEEEeCC----------------CCCCC--------------CHHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQH--QRL--GKIFDIWCLHIP----------------VKDRT--------------SFTG 176 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~--~~L--~~~~~Vi~~Dl~----------------G~G~S--------------s~~~ 176 (709)
.-|+|.++||.+++...|.... ..+ ..+..|+.++.. |.+.+ .+++
T Consensus 48 ~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T d1pv1a_ 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp TBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHH
T ss_pred CCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHH
Confidence 4689999999999988886532 222 245667777642 22222 1222
Q ss_pred -HHHHHHHHHHHhhccCC------CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCCC
Q 005190 177 -LVKLVESTVRSESNRSP------KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATS 231 (709)
Q Consensus 177 -~~~dl~~~l~~~~~~~~------~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~~ 231 (709)
+.+++...|+..-.... .....|.||||||.-|+.+|.+ +|+...++...++...
T Consensus 128 ~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~ 191 (299)
T d1pv1a_ 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCC
Confidence 34555555555332221 1468999999999999999986 4899988888887554
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=97.91 E-value=1.9e-05 Score=78.45 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=38.1
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhhcC------CcEEEEEcCCCccccccC
Q 005190 331 VKAQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFYGHGHFLLLED 378 (709)
Q Consensus 331 i~~PvLvi~G~~D~~v~~~~~~~~l~~~~~------~~~~~~i~~aGH~~~le~ 378 (709)
...|+++++|.+|..|++.. ++.+.+.+. +++++..+++||...-++
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~-s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~ 141 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNV-MNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHH-HHHHHHHHTTTSCGGGEEEEEETTCCSSEEESS
T ss_pred CCCCEEEEecCCCCCcCHHH-HHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCC
Confidence 35799999999999999997 887777553 356788899999987653
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=1.2e-05 Score=78.09 Aligned_cols=100 Identities=13% Similarity=0.007 Sum_probs=56.9
Q ss_pred CCCCCEEEEeCCCCCCcccHHHHHHHh--cCCceEEEEeCCCCCCC------------------------------CHHH
Q 005190 129 TRDSPLLLFLPGIDGVGLGLIRQHQRL--GKIFDIWCLHIPVKDRT------------------------------SFTG 176 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~s~~~~~~~~~~L--~~~~~Vi~~Dl~G~G~S------------------------------s~~~ 176 (709)
.+.-|+|+++||..........+...+ ..++-|++++.++...- ....
T Consensus 40 ~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~ 119 (265)
T d2gzsa1 40 ASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNN 119 (265)
T ss_dssp TTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHH
T ss_pred CCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCcccccccccccccCcccccccccchhccccchHH
Confidence 344678999999432222112223333 35688888887765321 0112
Q ss_pred HHHH-HHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 005190 177 LVKL-VESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (709)
Q Consensus 177 ~~~d-l~~~l~~~~~~~~--~~~v~LvGhS~GG~iAl~~A~~~P~~v~~lVl~~p~ 229 (709)
+.+. ..+++..+..... ..++.+.|||+||..++.++.+ ++.+.+++..+|.
T Consensus 120 ~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 120 FRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp HHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred HHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 2222 2223333333332 2568999999999999986665 5666677777663
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.76 E-value=0.00065 Score=71.71 Aligned_cols=102 Identities=18% Similarity=0.066 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCCCCcccHHHHHHH----------h-------cCCceEEEEeC-CCCCCC-----------------CHH
Q 005190 131 DSPLLLFLPGIDGVGLGLIRQHQR----------L-------GKIFDIWCLHI-PVKDRT-----------------SFT 175 (709)
Q Consensus 131 ~~p~Vv~lHG~~~s~~~~~~~~~~----------L-------~~~~~Vi~~Dl-~G~G~S-----------------s~~ 175 (709)
+.|+||++-|.+|++..+..+.+. | .+..+++.+|. .|-|.| +.+
T Consensus 66 ~~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~ 145 (483)
T d1ac5a_ 66 DRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLE 145 (483)
T ss_dssp SCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHH
Confidence 469999999999998887665431 1 13478999996 488988 224
Q ss_pred HHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHHhC------------CCceeEEEEecCCCCc
Q 005190 176 GLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN------------PDIDLVLILVNPATSF 232 (709)
Q Consensus 176 ~~~~dl~~~l~~~~~~~~---~~~v~LvGhS~GG~iAl~~A~~~------------P~~v~~lVl~~p~~~~ 232 (709)
+.++++..++.......+ ..+++|.|.|+||..+-.+|..- +=.++|+.+.++....
T Consensus 146 ~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~ 217 (483)
T d1ac5a_ 146 DVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDP 217 (483)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCH
T ss_pred HHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccCh
Confidence 566666666655444332 47899999999999888887642 1248899998887654
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=95.06 E-value=0.011 Score=56.19 Aligned_cols=43 Identities=26% Similarity=0.323 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...++.+....+..++++.|||+||.+|..+|..
T Consensus 111 ~~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 111 SYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 4566666677777766666778899999999999999988864
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.01 E-value=0.012 Score=55.98 Aligned_cols=43 Identities=30% Similarity=0.465 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...+..+..+.+..++++.|||+||.+|..+|..
T Consensus 103 ~~~~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 103 GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 4456666777777777777888899999999999999987754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=94.87 E-value=0.013 Score=55.83 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+.+...++.+....+..++++.|||+||.+|..+|..
T Consensus 116 ~~~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 116 SWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 4456666677777766667888899999999999999998874
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=94.87 E-value=0.011 Score=56.35 Aligned_cols=43 Identities=23% Similarity=0.332 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...++.+....+..++++.|||+||.+|..+|..
T Consensus 115 ~~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 115 SWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 4566666777777776666778899999999999999988865
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=94.79 E-value=0.015 Score=55.44 Aligned_cols=43 Identities=26% Similarity=0.315 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHHh
Q 005190 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (709)
Q Consensus 173 s~~~~~~dl~~~l~~~~~~~~~~~v~LvGhS~GG~iAl~~A~~ 215 (709)
.+..+.+++...+.....+.+..++++.|||+||.+|..+|..
T Consensus 110 ~~~~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 110 SYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 4455666666666666666778899999999999999988754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=93.74 E-value=0.35 Score=43.02 Aligned_cols=95 Identities=14% Similarity=0.061 Sum_probs=60.9
Q ss_pred EEEEeCCCCCCcc---cHHHHHHHhc-----CCceEEEEeCCCCCC--------CCHHHHHHHHHHHHHHhhccCCCCCE
Q 005190 134 LLLFLPGIDGVGL---GLIRQHQRLG-----KIFDIWCLHIPVKDR--------TSFTGLVKLVESTVRSESNRSPKRPV 197 (709)
Q Consensus 134 ~Vv~lHG~~~s~~---~~~~~~~~L~-----~~~~Vi~~Dl~G~G~--------Ss~~~~~~dl~~~l~~~~~~~~~~~v 197 (709)
.||+.-|-+.+.. .-..+.+.|. ....+..++++-... .+...=+.++...+.....+.+..++
T Consensus 19 ~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tki 98 (197)
T d1cexa_ 19 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 98 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeE
Confidence 4777777655432 1222334332 345666676543210 13344455566666666667999999
Q ss_pred EEEEechhHHHHHHHHHhCC----CceeEEEEecC
Q 005190 198 YLVGESLGACIALAVAARNP----DIDLVLILVNP 228 (709)
Q Consensus 198 ~LvGhS~GG~iAl~~A~~~P----~~v~~lVl~~p 228 (709)
+|+|+|.|+.++-.++...+ ++|.++++++-
T Consensus 99 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGD 133 (197)
T d1cexa_ 99 IAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGY 133 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESC
T ss_pred EEeeeccccHhhhcccccCChhhhhhEEEEEEEeC
Confidence 99999999999998887653 56888888754
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.30 E-value=0.077 Score=55.99 Aligned_cols=101 Identities=13% Similarity=-0.030 Sum_probs=60.7
Q ss_pred CCCCEEEEeCCCC---CCcccHHHHHHHh--cCCceEEEEeCC----CC---C-C--CCHHHHHHHHHHHHHHhhc---c
Q 005190 130 RDSPLLLFLPGID---GVGLGLIRQHQRL--GKIFDIWCLHIP----VK---D-R--TSFTGLVKLVESTVRSESN---R 191 (709)
Q Consensus 130 ~~~p~Vv~lHG~~---~s~~~~~~~~~~L--~~~~~Vi~~Dl~----G~---G-~--Ss~~~~~~dl~~~l~~~~~---~ 191 (709)
++-|++|++||.+ +++.........+ .++.-|+.+.+| |+ + . .+-.-=..|....|+.++. .
T Consensus 110 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 189 (542)
T d2ha2a1 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189 (542)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHHHHH
Confidence 3568999999964 2232221111222 356778888877 22 1 1 1222234455555555543 2
Q ss_pred CC--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 005190 192 SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (709)
Q Consensus 192 ~~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~ 230 (709)
.+ ..+|.|+|||.||..+..+.... ...+.++|+.+...
T Consensus 190 FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 190 FGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred hhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 33 36799999999999998776643 35788899887644
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=92.04 E-value=0.37 Score=43.31 Aligned_cols=81 Identities=14% Similarity=-0.032 Sum_probs=53.9
Q ss_pred EEEEeCCCCCCcc--cHHHHHHHhc---CCceEEEEeCCCCCCC------C----HHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 134 LLLFLPGIDGVGL--GLIRQHQRLG---KIFDIWCLHIPVKDRT------S----FTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 134 ~Vv~lHG~~~s~~--~~~~~~~~L~---~~~~Vi~~Dl~G~G~S------s----~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
.||+.-|-+.+.. ....+...+. .+..+..+++|..-.. + ..+=+.++...++....+.+..+++
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEecCCCCCCCCCcchHHHHHHHHhCCCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 3566666544322 2233333332 4567888898886322 2 3344566777777777789999999
Q ss_pred EEEechhHHHHHHHHH
Q 005190 199 LVGESLGACIALAVAA 214 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~ 214 (709)
|+|+|.|+.++-.++.
T Consensus 86 l~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 86 LVGYSQGAQIFDNALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEeeccchHHHHHHHh
Confidence 9999999999988875
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=91.25 E-value=0.57 Score=41.99 Aligned_cols=81 Identities=16% Similarity=0.026 Sum_probs=53.1
Q ss_pred EEEEeCCCCCCc--ccHHHHHHHhc---CCceEEEEeCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005190 134 LLLFLPGIDGVG--LGLIRQHQRLG---KIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPVY 198 (709)
Q Consensus 134 ~Vv~lHG~~~s~--~~~~~~~~~L~---~~~~Vi~~Dl~G~G~S----------s~~~~~~dl~~~l~~~~~~~~~~~v~ 198 (709)
.||+.-|-+.+. ..-..+...+. .+..+..+++|..... |..+=+..+...++....+.+..+++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~v 85 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhcCCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 466667665432 12222333331 3567888899874321 33444556777777777779999999
Q ss_pred EEEechhHHHHHHHHH
Q 005190 199 LVGESLGACIALAVAA 214 (709)
Q Consensus 199 LvGhS~GG~iAl~~A~ 214 (709)
|+|+|.|+.++-.++.
T Consensus 86 l~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 86 LVGYSQGGEIMDVALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEeeccccHHHHHHHh
Confidence 9999999999988764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=91.13 E-value=0.14 Score=52.91 Aligned_cols=102 Identities=15% Similarity=0.071 Sum_probs=60.8
Q ss_pred CCCCEEEEeCCCCC---CcccHHHHHHHh--cCCceEEEEeCCCC--CC---C------CHHHHHHHHHHHHHHhhcc--
Q 005190 130 RDSPLLLFLPGIDG---VGLGLIRQHQRL--GKIFDIWCLHIPVK--DR---T------SFTGLVKLVESTVRSESNR-- 191 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~---s~~~~~~~~~~L--~~~~~Vi~~Dl~G~--G~---S------s~~~~~~dl~~~l~~~~~~-- 191 (709)
.+-|++|++||.+- +...+......+ ..+.=|+.+.+|=- |. + +-.--..|...+++.++.-
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 173 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENIS 173 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHH
Confidence 35789999999742 322222212222 24577777776531 11 1 1122344555555555432
Q ss_pred -CC--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 005190 192 -SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (709)
Q Consensus 192 -~~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~ 231 (709)
.+ .++|.|+|||.||..+..+.... ...+.++|+.++...
T Consensus 174 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 174 AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred HcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 22 36799999999999887766542 357999999887543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=91.01 E-value=0.22 Score=52.30 Aligned_cols=100 Identities=13% Similarity=0.021 Sum_probs=59.4
Q ss_pred CCCCEEEEeCCCCCCc---ccH--HH-HHHHh--cCCceEEEEeCC----CCCCC-------CHHHHHHHHHHHHHHhhc
Q 005190 130 RDSPLLLFLPGIDGVG---LGL--IR-QHQRL--GKIFDIWCLHIP----VKDRT-------SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~s~---~~~--~~-~~~~L--~~~~~Vi~~Dl~----G~G~S-------s~~~~~~dl~~~l~~~~~ 190 (709)
++-|++|++||.+-.. ..+ .. ....+ ..+.=|+.+.+| |+-.+ +-.-=..|...+++.++.
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 199 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhh
Confidence 3568999999975322 221 22 22334 356778888887 22111 112234455555555543
Q ss_pred c---CC--CCCEEEEEechhHHHHHHHHHhC--------CCceeEEEEecCC
Q 005190 191 R---SP--KRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPA 229 (709)
Q Consensus 191 ~---~~--~~~v~LvGhS~GG~iAl~~A~~~--------P~~v~~lVl~~p~ 229 (709)
. .+ .++|.|+|||.||..+..+.... ..++.++|+.++.
T Consensus 200 nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred hhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 2 22 36799999999998776555431 2478999998764
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=89.83 E-value=0.35 Score=50.53 Aligned_cols=101 Identities=16% Similarity=0.033 Sum_probs=58.9
Q ss_pred CCCCCEEEEeCCCCC---CcccH--HHHH-HHh--cCCceEEEEeCCC----CCCC-------CHHHHHHHHHHHHHHhh
Q 005190 129 TRDSPLLLFLPGIDG---VGLGL--IRQH-QRL--GKIFDIWCLHIPV----KDRT-------SFTGLVKLVESTVRSES 189 (709)
Q Consensus 129 ~~~~p~Vv~lHG~~~---s~~~~--~~~~-~~L--~~~~~Vi~~Dl~G----~G~S-------s~~~~~~dl~~~l~~~~ 189 (709)
.++.|++|++||.+- ++..| ..++ ..+ .++.=|+.+.+|- +-.. +-.--..|....++.++
T Consensus 111 ~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~ 190 (534)
T d1llfa_ 111 GANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVA 190 (534)
T ss_dssp TCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHH
Confidence 346789999999752 23222 2232 222 3677888888873 1111 11122345555555555
Q ss_pred cc---CC--CCCEEEEEechhHHHHH-HHHHhC----C---CceeEEEEecCC
Q 005190 190 NR---SP--KRPVYLVGESLGACIAL-AVAARN----P---DIDLVLILVNPA 229 (709)
Q Consensus 190 ~~---~~--~~~v~LvGhS~GG~iAl-~~A~~~----P---~~v~~lVl~~p~ 229 (709)
.- .+ ..+|.|+|||.||..+. .+.... | ..+.++|+.++.
T Consensus 191 ~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 191 DNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred hhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 42 22 36799999999998664 444221 1 348889998764
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.66 E-value=0.32 Score=50.75 Aligned_cols=100 Identities=10% Similarity=-0.020 Sum_probs=59.2
Q ss_pred CCCEEEEeCCCC---CCcccHHHHHHHhcCCceEEEEeCCC----C---CCC--CHHHHHHHHHHHHHHhhc---cCC--
Q 005190 131 DSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPV----K---DRT--SFTGLVKLVESTVRSESN---RSP-- 193 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~Dl~G----~---G~S--s~~~~~~dl~~~l~~~~~---~~~-- 193 (709)
.-|++|++||.+ +++..+....-...++.=|+.+.+|- + +.. +-.--..|...+|+.++. ..+
T Consensus 112 ~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGD 191 (532)
T d2h7ca1 112 RLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGN 191 (532)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred CcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHHhcCC
Confidence 468999999974 33333322111113566777777653 1 111 222334444445555443 233
Q ss_pred CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 005190 194 KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (709)
Q Consensus 194 ~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~ 230 (709)
..+|.|+|||.||..+..+... ....+.++|+.+...
T Consensus 192 p~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 192 PGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp EEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 3679999999999888776654 245788999987643
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=88.82 E-value=0.3 Score=51.05 Aligned_cols=102 Identities=12% Similarity=0.010 Sum_probs=57.8
Q ss_pred CCCCEEEEeCCCC---CCcc--cHHHHHHHhcCCceEEEEeCCC-------CC-CC--CHHHHHHHHHHHHHHhhc---c
Q 005190 130 RDSPLLLFLPGID---GVGL--GLIRQHQRLGKIFDIWCLHIPV-------KD-RT--SFTGLVKLVESTVRSESN---R 191 (709)
Q Consensus 130 ~~~p~Vv~lHG~~---~s~~--~~~~~~~~L~~~~~Vi~~Dl~G-------~G-~S--s~~~~~~dl~~~l~~~~~---~ 191 (709)
++.|++|++||.+ +++. .+....-...++.=|+.+.+|= .+ .. +-.-=..|...+|+.++. .
T Consensus 104 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 183 (532)
T d1ea5a_ 104 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQF 183 (532)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHHh
Confidence 3578999999964 2222 2222111113456666666542 11 11 112233444444444443 2
Q ss_pred CC--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 005190 192 SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (709)
Q Consensus 192 ~~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~ 231 (709)
.+ ..+|.|+|||.||..+..+.... ...+.++|+.+....
T Consensus 184 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 184 FGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 33 36799999999999887766542 356889998876543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.35 E-value=0.21 Score=52.19 Aligned_cols=101 Identities=13% Similarity=0.005 Sum_probs=57.9
Q ss_pred CCCCEEEEeCCCCC---CcccHHHHHHHh--cCCceEEEEeCCC-------C-CCC--CHHHHHHHHHHHHHHhhcc---
Q 005190 130 RDSPLLLFLPGIDG---VGLGLIRQHQRL--GKIFDIWCLHIPV-------K-DRT--SFTGLVKLVESTVRSESNR--- 191 (709)
Q Consensus 130 ~~~p~Vv~lHG~~~---s~~~~~~~~~~L--~~~~~Vi~~Dl~G-------~-G~S--s~~~~~~dl~~~l~~~~~~--- 191 (709)
++.|++|++||.+- ++.....-...+ ..+.-|+.+.+|= + +.. +-.-=..|...+|+.++.-
T Consensus 102 ~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 181 (526)
T d1p0ia_ 102 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAA 181 (526)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHHH
Confidence 35789999998742 222222112222 2456677776652 1 111 2233344555555554432
Q ss_pred CC--CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 005190 192 SP--KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (709)
Q Consensus 192 ~~--~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~ 230 (709)
.+ ..+|.|+|+|.||..+..+... ....+.++|+.+...
T Consensus 182 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 182 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 22 3679999999999988655543 245688888877644
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=88.16 E-value=0.9 Score=47.01 Aligned_cols=100 Identities=12% Similarity=0.053 Sum_probs=58.3
Q ss_pred CCCEEEEeCCCC---CCcccHH--HHHHHhcCCceEEEEeCCCC--C--CC-------CHHHHHHHHHHHHHHhhcc---
Q 005190 131 DSPLLLFLPGID---GVGLGLI--RQHQRLGKIFDIWCLHIPVK--D--RT-------SFTGLVKLVESTVRSESNR--- 191 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~--~~~~~L~~~~~Vi~~Dl~G~--G--~S-------s~~~~~~dl~~~l~~~~~~--- 191 (709)
+-|++|++||.+ |+...+. .....-..+.-|+.+.+|=- | .+ +..--..|...+++.++.-
T Consensus 96 ~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~ 175 (517)
T d1ukca_ 96 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 175 (517)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 358999999974 2333332 22222234466778777631 1 11 1122344555555555432
Q ss_pred CC--CCCEEEEEechhHHHHHHHHHh----CCCceeEEEEecCCC
Q 005190 192 SP--KRPVYLVGESLGACIALAVAAR----NPDIDLVLILVNPAT 230 (709)
Q Consensus 192 ~~--~~~v~LvGhS~GG~iAl~~A~~----~P~~v~~lVl~~p~~ 230 (709)
.+ ..+|.|+|||.||..+...... ....+.++|+.++..
T Consensus 176 FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 176 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred hcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 22 3679999999999877654432 234799999987744
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.96 E-value=0.89 Score=47.81 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=55.1
Q ss_pred CCCEEEEeCCCC---CCcccHH------HHHHHhc--CCceEEEEeCCC-------CCCC--CHHHHHHHHHHHHHHhhc
Q 005190 131 DSPLLLFLPGID---GVGLGLI------RQHQRLG--KIFDIWCLHIPV-------KDRT--SFTGLVKLVESTVRSESN 190 (709)
Q Consensus 131 ~~p~Vv~lHG~~---~s~~~~~------~~~~~L~--~~~~Vi~~Dl~G-------~G~S--s~~~~~~dl~~~l~~~~~ 190 (709)
+-|++|++||.+ |++.... .....|+ ...=|+.+.+|= .+.. +-.-=..|...+++.++.
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~ 176 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhh
Confidence 468999999874 2221110 0112332 345677777652 1111 112223344444444433
Q ss_pred ---cCC--CCCEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 005190 191 ---RSP--KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (709)
Q Consensus 191 ---~~~--~~~v~LvGhS~GG~iAl~~A~~--~P~~v~~lVl~~p~~ 230 (709)
..+ ..+|.|+|||.||..+..+... ....+.++|+.+...
T Consensus 177 nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 233 3679999999999988766543 356799999987643
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=83.37 E-value=1.5 Score=45.94 Aligned_cols=102 Identities=13% Similarity=0.025 Sum_probs=58.9
Q ss_pred CCCCEEEEeCCCC---CCcccHHHHHHHhc--CCceEEEEeCCCC--C--------------CCCHHHHHHHHHHHHHHh
Q 005190 130 RDSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVK--D--------------RTSFTGLVKLVESTVRSE 188 (709)
Q Consensus 130 ~~~p~Vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~Dl~G~--G--------------~Ss~~~~~~dl~~~l~~~ 188 (709)
++-|++|++||.+ +++.....-...|+ ...=|+.+.+|=- | ..+-.--..|...+|+.+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV 216 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWL 216 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHHH
Confidence 3578999999964 23322222222332 2355566665521 1 001233445555556665
Q ss_pred hccC---C--CCCEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 005190 189 SNRS---P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (709)
Q Consensus 189 ~~~~---~--~~~v~LvGhS~GG~iAl~~A~~~--P~~v~~lVl~~p~~~ 231 (709)
+.-. + .++|.|+|||.||..+..+.... ...+.++|+.+....
T Consensus 217 ~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 217 KDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 5432 2 36899999999999887665542 356888888766443
|