Query 005192
Match_columns 709
No_of_seqs 260 out of 1143
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 18:11:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005192.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005192hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 5.5E-24 1.9E-28 204.7 16.3 149 433-598 5-163 (169)
2 3v31_A Ankyrin repeat family A 99.9 7.8E-22 2.7E-26 184.1 16.1 150 432-598 3-162 (167)
3 3v30_A DNA-binding protein rfx 99.9 8.2E-22 2.8E-26 184.9 15.6 150 433-598 3-162 (172)
4 2etb_A Transient receptor pote 99.9 4.1E-22 1.4E-26 198.5 14.0 158 430-597 41-247 (256)
5 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.8E-22 1.3E-26 184.6 12.6 148 431-596 4-162 (162)
6 3jxi_A Vanilloid receptor-rela 99.9 3.4E-22 1.2E-26 199.1 13.2 159 431-598 45-252 (260)
7 2rfa_A Transient receptor pote 99.9 1.6E-21 5.6E-26 190.6 17.3 164 430-598 35-224 (232)
8 1oy3_D Transcription factor in 99.9 7.1E-22 2.4E-26 197.0 14.8 168 431-614 44-270 (282)
9 2rfm_A Putative ankyrin repeat 99.9 1.2E-21 4.2E-26 187.2 15.6 147 431-594 34-190 (192)
10 1oy3_D Transcription factor in 99.9 1.3E-21 4.6E-26 195.0 16.0 152 430-596 7-217 (282)
11 2pnn_A Transient receptor pote 99.9 1.1E-21 3.6E-26 197.7 14.2 158 430-596 52-258 (273)
12 1awc_B Protein (GA binding pro 99.9 2.5E-21 8.7E-26 178.9 15.5 141 432-590 2-152 (153)
13 2dzn_A Probable 26S proteasome 99.9 4.3E-21 1.5E-25 186.3 17.2 153 431-596 35-200 (228)
14 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-21 7.1E-26 178.9 14.2 145 431-593 1-155 (156)
15 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.8E-21 1.3E-25 180.8 16.0 146 431-593 13-168 (169)
16 1d9s_A Cyclin-dependent kinase 99.9 8.2E-22 2.8E-26 179.4 10.8 126 430-596 10-136 (136)
17 2jab_A H10-2-G3; HER2, darpin, 99.9 2.8E-21 9.7E-26 175.8 14.2 124 430-593 12-135 (136)
18 1yyh_A HN1;, notch 1, ankyrin 99.9 4.4E-21 1.5E-25 191.7 15.9 151 430-597 55-216 (253)
19 2rfa_A Transient receptor pote 99.9 3.5E-21 1.2E-25 188.2 14.4 150 432-597 3-184 (232)
20 3aji_A 26S proteasome non-ATPa 99.9 8.3E-21 2.8E-25 185.1 16.0 149 431-596 39-197 (231)
21 1n0r_A 4ANK, 4 ankyrin repeats 99.8 9.5E-21 3.3E-25 166.5 14.9 125 432-596 2-126 (126)
22 2f8y_A Notch homolog 1, transl 99.8 1.1E-20 3.7E-25 183.3 16.7 152 431-598 57-218 (223)
23 2f8y_A Notch homolog 1, transl 99.8 9.9E-21 3.4E-25 183.5 16.5 151 430-597 23-184 (223)
24 3hra_A Ankyrin repeat family p 99.8 1.1E-20 3.7E-25 180.4 15.2 147 431-593 38-200 (201)
25 3twr_A Tankyrase-2; ankyrin re 99.8 3.9E-21 1.3E-25 179.1 11.8 126 431-595 7-132 (165)
26 2xai_A ASB-9, ankyrin repeat a 99.8 7.2E-21 2.5E-25 191.4 14.5 160 431-609 35-206 (261)
27 3utm_A Tankyrase-1; tankyrase, 99.8 1.7E-20 5.9E-25 192.0 17.1 151 431-597 90-306 (351)
28 1s70_B 130 kDa myosin-binding 99.8 8.2E-21 2.8E-25 192.1 14.5 162 431-609 72-272 (299)
29 1ikn_D Protein (I-kappa-B-alph 99.8 3.8E-21 1.3E-25 189.2 11.1 152 431-598 44-211 (236)
30 2etb_A Transient receptor pote 99.8 2.6E-21 8.8E-26 192.7 10.0 159 432-598 2-208 (256)
31 1yyh_A HN1;, notch 1, ankyrin 99.8 1.4E-20 4.9E-25 188.1 13.9 147 431-593 89-245 (253)
32 2dzn_A Probable 26S proteasome 99.8 3.4E-20 1.2E-24 180.0 15.8 147 433-594 3-163 (228)
33 4g8k_A 2-5A-dependent ribonucl 99.8 2.6E-20 9.1E-25 193.1 15.7 162 430-598 123-300 (337)
34 3ljn_A Hypothetical protein; a 99.8 2.2E-20 7.4E-25 195.7 15.1 118 471-596 135-269 (364)
35 4hbd_A KN motif and ankyrin re 99.8 1.7E-20 5.9E-25 191.7 13.6 149 431-595 110-274 (276)
36 4b93_B Ankyrin repeat domain-c 99.8 2.3E-20 7.8E-25 191.2 14.4 129 473-609 85-225 (269)
37 3aji_A 26S proteasome non-ATPa 99.8 2.1E-20 7.3E-25 182.1 13.6 149 431-596 72-230 (231)
38 3d9h_A CDNA FLJ77766, highly s 99.8 3.5E-20 1.2E-24 189.7 15.7 159 431-608 91-261 (285)
39 1k1a_A B-cell lymphoma 3-encod 99.8 5E-20 1.7E-24 179.9 15.9 150 431-597 45-209 (241)
40 1k1a_A B-cell lymphoma 3-encod 99.8 5.6E-20 1.9E-24 179.5 16.3 153 431-596 8-175 (241)
41 3f6q_A Integrin-linked protein 99.8 1.1E-20 3.6E-25 179.1 10.7 151 432-598 5-165 (179)
42 2pnn_A Transient receptor pote 99.8 6.5E-21 2.2E-25 191.9 9.6 159 432-598 13-220 (273)
43 2xai_A ASB-9, ankyrin repeat a 99.8 5.8E-20 2E-24 184.8 15.7 148 432-597 3-160 (261)
44 1bi7_B P16INK4A, MTS1, multipl 99.8 7.3E-21 2.5E-25 177.0 8.3 128 429-597 9-137 (156)
45 3hra_A Ankyrin repeat family p 99.8 8E-20 2.7E-24 174.4 15.4 150 433-597 6-171 (201)
46 3b7b_A Euchromatic histone-lys 99.8 9.1E-20 3.1E-24 178.4 15.8 148 432-596 11-169 (237)
47 1ikn_D Protein (I-kappa-B-alph 99.8 4.3E-21 1.5E-25 188.8 6.3 164 431-609 7-191 (236)
48 3b7b_A Euchromatic histone-lys 99.8 1.2E-19 4.1E-24 177.5 16.5 149 431-596 43-202 (237)
49 1wdy_A 2-5A-dependent ribonucl 99.8 1.6E-19 5.6E-24 179.0 17.5 159 431-598 104-280 (285)
50 3jxi_A Vanilloid receptor-rela 99.8 1.1E-20 3.8E-25 188.2 8.6 158 433-598 6-212 (260)
51 3t8k_A Uncharacterized protein 99.8 3.9E-20 1.3E-24 180.2 11.1 129 431-598 37-181 (186)
52 3ljn_A Hypothetical protein; a 99.8 4.5E-20 1.5E-24 193.3 12.2 154 430-596 51-236 (364)
53 2fo1_E LIN-12 protein; beta-ba 99.8 1E-19 3.5E-24 193.5 14.7 153 431-597 198-372 (373)
54 1n11_A Ankyrin; clathrin, BAND 99.8 1.7E-19 5.9E-24 193.1 16.5 149 432-597 212-370 (437)
55 3eu9_A Huntingtin-interacting 99.8 1.8E-19 6.1E-24 174.6 15.0 150 432-598 76-237 (240)
56 3c5r_A BARD-1, BRCA1-associate 99.8 1.3E-20 4.4E-25 171.0 6.5 125 430-594 8-132 (137)
57 3aaa_C Myotrophin, protein V-1 99.8 4.9E-20 1.7E-24 164.5 10.0 116 432-590 7-122 (123)
58 3d9h_A CDNA FLJ77766, highly s 99.8 1.8E-19 6.3E-24 184.3 15.4 148 431-596 58-215 (285)
59 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.1E-19 3.8E-24 155.1 11.3 93 473-596 1-93 (93)
60 1dcq_A PYK2-associated protein 99.8 2.5E-19 8.5E-24 184.8 16.0 140 433-608 131-273 (278)
61 4g8k_A 2-5A-dependent ribonucl 99.8 5.1E-19 1.7E-23 183.4 16.7 152 432-593 25-190 (337)
62 3utm_A Tankyrase-1; tankyrase, 99.8 6.6E-19 2.2E-23 180.2 17.3 151 430-596 56-272 (351)
63 1wdy_A 2-5A-dependent ribonucl 99.8 5.6E-19 1.9E-23 175.1 16.1 147 431-592 71-240 (285)
64 3kea_A K1L; tropism, ANK repea 99.8 7.2E-20 2.4E-24 187.7 9.9 150 432-598 62-222 (285)
65 3deo_A Signal recognition part 99.8 2.2E-19 7.5E-24 171.6 11.6 113 430-583 42-155 (183)
66 3eu9_A Huntingtin-interacting 99.8 8.1E-19 2.8E-23 170.0 15.5 152 431-597 41-203 (240)
67 1n11_A Ankyrin; clathrin, BAND 99.8 8.8E-19 3E-23 187.6 16.6 147 431-594 244-400 (437)
68 2fo1_E LIN-12 protein; beta-ba 99.8 3.3E-19 1.1E-23 189.5 13.1 151 431-597 165-339 (373)
69 2vge_A RELA-associated inhibit 99.8 2.4E-19 8.3E-24 179.1 11.3 126 432-597 21-149 (229)
70 3ehr_A Osteoclast-stimulating 99.8 1.2E-19 4.2E-24 177.5 8.3 127 432-598 73-200 (222)
71 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3E-19 1E-23 177.9 10.9 127 432-598 37-166 (239)
72 1sw6_A Regulatory protein SWI6 99.8 1.6E-19 5.6E-24 188.8 9.4 164 435-608 100-322 (327)
73 4gpm_A Engineered protein OR26 99.8 8.2E-19 2.8E-23 168.6 12.8 114 476-597 6-129 (169)
74 3ui2_A Signal recognition part 99.8 5.8E-19 2E-23 177.2 12.3 126 430-596 43-185 (244)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.5E-19 8.4E-24 178.6 9.3 125 432-597 5-129 (239)
76 4hbd_A KN motif and ankyrin re 99.8 3.7E-19 1.3E-23 181.8 10.5 149 433-596 77-242 (276)
77 3kea_A K1L; tropism, ANK repea 99.8 5.3E-19 1.8E-23 181.2 11.1 147 431-598 30-188 (285)
78 4b93_B Ankyrin repeat domain-c 99.8 2.6E-19 8.8E-24 183.4 6.9 142 430-590 84-235 (269)
79 2b0o_E UPLC1; arfgap, structur 99.8 3.6E-18 1.2E-22 178.2 15.2 131 433-597 152-285 (301)
80 3lvq_E ARF-GAP with SH3 domain 99.8 2.4E-18 8.3E-23 190.7 14.5 131 434-598 134-267 (497)
81 1sw6_A Regulatory protein SWI6 99.7 3E-19 1E-23 186.8 4.0 136 430-582 129-327 (327)
82 3jue_A Arfgap with coiled-coil 99.7 9.8E-18 3.3E-22 181.0 14.9 126 433-596 200-326 (368)
83 1s70_B 130 kDa myosin-binding 99.7 9.8E-18 3.4E-22 169.5 11.2 122 432-593 40-161 (299)
84 2rfm_A Putative ankyrin repeat 99.7 9.9E-18 3.4E-22 160.1 10.3 117 472-596 33-159 (192)
85 1awc_B Protein (GA binding pro 99.7 2.4E-17 8.1E-22 152.2 11.5 114 474-596 2-125 (153)
86 3aaa_C Myotrophin, protein V-1 99.7 2.8E-17 9.6E-22 146.6 11.2 93 473-596 6-98 (123)
87 3v31_A Ankyrin repeat family A 99.7 2.4E-17 8.2E-22 153.7 10.9 116 473-596 2-127 (167)
88 1ihb_A P18-INK4C(INK6), cyclin 99.7 3.6E-17 1.2E-21 151.0 11.9 114 474-596 5-128 (162)
89 3c5r_A BARD-1, BRCA1-associate 99.7 2.7E-17 9.2E-22 149.1 10.6 95 471-596 7-101 (137)
90 2l6b_A NR1C; ankyrin, consensu 99.7 1.7E-17 5.7E-22 146.1 8.5 96 471-597 6-101 (115)
91 2y1l_E Darpin-8.4; hydrolase-i 99.7 5.4E-17 1.9E-21 152.5 12.2 117 472-596 12-138 (169)
92 3twr_A Tankyrase-2; ankyrin re 99.7 4.8E-17 1.6E-21 151.4 11.2 108 472-609 6-115 (165)
93 3t8k_A Uncharacterized protein 99.7 6.3E-18 2.1E-22 164.6 5.3 123 434-596 8-146 (186)
94 3v30_A DNA-binding protein rfx 99.7 6.3E-17 2.2E-21 151.5 11.5 116 474-596 2-127 (172)
95 2zgd_A 3 repeat synthetic anky 99.7 8.5E-17 2.9E-21 142.1 10.5 89 471-590 21-109 (110)
96 2jab_A H10-2-G3; HER2, darpin, 99.7 6.9E-17 2.3E-21 146.8 10.1 94 472-596 12-105 (136)
97 3f6q_A Integrin-linked protein 99.7 1.8E-16 6E-21 150.0 12.1 116 473-596 4-130 (179)
98 1bd8_A P19INK4D CDK4/6 inhibit 99.7 1.9E-16 6.5E-21 145.6 12.0 111 474-593 2-123 (156)
99 1d9s_A Cyclin-dependent kinase 99.7 4.9E-17 1.7E-21 147.8 7.2 94 471-596 9-103 (136)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.7 3.1E-16 1.1E-20 137.6 10.7 93 473-596 1-93 (126)
101 2vge_A RELA-associated inhibit 99.7 2.4E-16 8.4E-21 157.4 11.0 96 471-597 18-113 (229)
102 3ehr_A Osteoclast-stimulating 99.6 4E-16 1.4E-20 152.6 11.2 108 472-609 71-180 (222)
103 3deo_A Signal recognition part 99.6 7.6E-16 2.6E-20 147.0 9.9 94 471-596 41-135 (183)
104 2l6b_A NR1C; ankyrin, consensu 99.6 4.5E-16 1.5E-20 136.9 7.6 106 430-575 7-112 (115)
105 1bi7_B P16INK4A, MTS1, multipl 99.6 5.1E-16 1.7E-20 144.2 8.1 94 471-596 9-103 (156)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.6 2.9E-15 9.9E-20 127.6 10.7 90 432-555 2-91 (93)
107 2aja_A Ankyrin repeat family p 99.6 1.6E-16 5.5E-21 171.8 2.5 145 433-597 93-251 (376)
108 2b0o_E UPLC1; arfgap, structur 99.6 8.3E-16 2.8E-20 160.4 7.5 109 430-584 188-299 (301)
109 3ui2_A Signal recognition part 99.6 1.6E-15 5.4E-20 152.2 8.8 93 472-596 43-136 (244)
110 2aja_A Ankyrin repeat family p 99.5 4.2E-16 1.4E-20 168.6 0.0 138 431-588 127-271 (376)
111 2zgd_A 3 repeat synthetic anky 99.5 2.2E-13 7.4E-18 120.1 9.9 88 430-551 22-109 (110)
112 3lvq_E ARF-GAP with SH3 domain 99.4 1.7E-13 5.9E-18 151.8 10.5 105 430-580 169-276 (497)
113 3jue_A Arfgap with coiled-coil 99.4 2E-13 6.7E-18 147.4 9.8 93 473-596 198-293 (368)
114 1dcq_A PYK2-associated protein 99.4 1E-12 3.5E-17 135.3 10.7 102 473-598 129-232 (278)
115 2cxk_A Camta1, calmodulin bind 61.7 29 0.001 30.2 8.0 48 260-308 4-51 (95)
116 1uad_C RSEC5, exocyst complex 57.7 25 0.00087 30.6 7.0 39 261-301 6-45 (99)
117 1pby_A Quinohemoprotein amine 32.5 72 0.0025 35.6 6.9 45 257-301 270-319 (489)
118 1jmx_A Amine dehydrogenase; ox 30.4 78 0.0027 35.4 6.8 33 257-290 279-311 (494)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.91 E-value=5.5e-24 Score=204.71 Aligned_cols=149 Identities=25% Similarity=0.203 Sum_probs=122.7
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhh
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 512 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L 512 (709)
.+.|+.|+++|+.++|+.||+..++ ++.. +..|+||||+|+..++.+++++||++|++++. .+..++|||
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gad--vn~~-------d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpL 74 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGAD--VNAS-------DSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPL 74 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCC--CCCc-------CCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHH
Confidence 4578899999999999999998443 3322 34799999999999999999999999998762 223468999
Q ss_pred hhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 005192 513 VDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 582 (709)
Q Consensus 513 ~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG 582 (709)
|+|+..+. ..++|.+|..|+||||+||..++. +++++|++.+ |++|.+|.+|+||||+|+.+|
T Consensus 75 h~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~g------ad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK-EVVKLLISKG------ADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCccccCCCCCCHHHHHHHcC
Confidence 99975543 358999999999999999998765 5999999885 778999999999999999999
Q ss_pred CHHHHHHHHHHhhhcC
Q 005192 583 HHSYIHLVQRKINKKS 598 (709)
Q Consensus 583 ~~~iieLLl~k~~~~~ 598 (709)
+.+++++|++++++.+
T Consensus 148 ~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CHHHHHHHHTC-----
T ss_pred CHHHHHHHHHCCCCcC
Confidence 9999999999999876
No 2
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.87 E-value=7.8e-22 Score=184.15 Aligned_cols=150 Identities=16% Similarity=0.077 Sum_probs=126.4
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..+|||+|+.+|..++++.|++...+ ++.. +..|+||||+|+..|+.+++++|+++|++++. .+..+.||
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 72 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENV--INHT-------DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESA 72 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCC--cCCC-------CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcH
Confidence 36799999999999999999998322 2222 34799999999999999999999999998762 22346899
Q ss_pred hhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 005192 512 LVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~r 581 (709)
||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.+
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHV-KCVKMLLESG------ADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCCCHHHHHHHc
Confidence 999975433 358899999999999999998765 5899999875 67799999999999999999
Q ss_pred CCHHHHHHHHHHhhhcC
Q 005192 582 AHHSYIHLVQRKINKKS 598 (709)
Q Consensus 582 G~~~iieLLl~k~~~~~ 598 (709)
|+.+++++|+++..+..
T Consensus 146 ~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 146 GYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TCHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 99999999999988755
No 3
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.87 E-value=8.2e-22 Score=184.85 Aligned_cols=150 Identities=19% Similarity=0.115 Sum_probs=125.1
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhh
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 512 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L 512 (709)
+++||+|+.+|+.++++.||+...+ .++.. +..|+||||+|++.|+.++|++|+++|++++. .+..+.|||
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L 73 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN-LVNKP-------DERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESAL 73 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG-GGGCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc-cccCC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHH
Confidence 4689999999999999999998321 02221 34799999999999999999999999998762 123468999
Q ss_pred hhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 005192 513 VDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 582 (709)
Q Consensus 513 ~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG 582 (709)
|+|+..+. ..++|.+|..|+||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.+|
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV-KCVEALLARG------ADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCccccCCCCCCHHHHHHHhC
Confidence 99975533 358899999999999999998765 4899999875 678999999999999999999
Q ss_pred CHHHHHHHHHHhhhcC
Q 005192 583 HHSYIHLVQRKINKKS 598 (709)
Q Consensus 583 ~~~iieLLl~k~~~~~ 598 (709)
+.+++++|++++.+..
T Consensus 147 ~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 147 YRKVQQVIENHILKLF 162 (172)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHh
Confidence 9999999999988765
No 4
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.87 E-value=4.1e-22 Score=198.47 Aligned_cols=158 Identities=19% Similarity=0.114 Sum_probs=127.3
Q ss_pred hccchHHHHHHhC---CChHhHHHHHhhhcCCc-c----CCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC
Q 005192 430 KRFKWLLEFSMEH---DWCAVVKKLLGILFDGT-V----DTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV 501 (709)
Q Consensus 430 ~R~r~lL~fAve~---g~~aVvk~LLd~l~~ga-v----~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~ 501 (709)
...+||||+|+.+ |+.+++++||+..++.. + +.. ....+..|+||||+|+..|+.++|++||++|++++
T Consensus 41 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 117 (256)
T 2etb_A 41 STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ---CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH 117 (256)
T ss_dssp TTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCC---CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccc---cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3457899999999 99999999999855432 1 100 00012469999999999999999999999999987
Q ss_pred CCCCC------------cchhhhhhhhccc-------------ccccCCCCCCCCChHHHHHHh--cCChHH-------H
Q 005192 502 LDKPG------------SRQKQLVDRAGSG-------------FIFKPNVIGPAGLTPLHVAAC--RDDAEN-------V 547 (709)
Q Consensus 502 ~d~~~------------~~~t~L~~a~~~~-------------~l~d~na~d~~G~TPLHlAA~--~~~~e~-------V 547 (709)
..... .+.||||+|+..+ ...++|.+|..|+||||+|+. .+ ..+ +
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~-~~~~~~~~~~i 196 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADN-SPENSALVIHM 196 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS-CHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccC-CchhhHHHHHH
Confidence 33222 2799999996442 456789999999999999998 44 444 8
Q ss_pred HHHHhcCCCCCCccccc-------cccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 548 LDALTDDPGSVGIEAWK-------SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 548 v~lLl~~p~~vGi~A~v-------NarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
+++|++.+ +++ |.+|..|.||||+|+.+|+.+++++|+++..+.
T Consensus 197 v~~Ll~~g------a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 197 YDGLLQMG------ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHH------HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcC------CCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 89998874 677 899999999999999999999999999987764
No 5
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.87 E-value=3.8e-22 Score=184.56 Aligned_cols=148 Identities=20% Similarity=0.152 Sum_probs=118.6
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
++.++||+|+.+|..++++.||+..++ ++.. +..|.||||+|+. |+.+++++|+++|++++. .+..+.|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~--~~~~-------~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t 72 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN--VNAQ-------NGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFA 72 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC--TTCC-------CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC--cccc-------CccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCC
Confidence 456899999999999999999987322 2221 3468899999999 999999999999988762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCcccc-ccccCCCCCCHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW-KSAQDSTGLTPNDYAS 579 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~-vNarD~~G~TPLh~Aa 579 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++ ++.+|..|.||||+|+
T Consensus 73 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~~g~t~l~~A~ 145 (162)
T 1ihb_A 73 VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHL-RVVEFLVKHT------ASNVGHRNHKGDTACDLAR 145 (162)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHS------CCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcc------CCCCCCcCCCCCcHHHHHH
Confidence 9999964433 357899999999999999998765 5899998775 33 5899999999999999
Q ss_pred HcCCHHHHHHHHHHhhh
Q 005192 580 LRAHHSYIHLVQRKINK 596 (709)
Q Consensus 580 ~rG~~~iieLLl~k~~~ 596 (709)
.+|+.+++++|++++++
T Consensus 146 ~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 146 LYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HTTCHHHHHHHHHTC--
T ss_pred HcCCHHHHHHHHHhCCC
Confidence 99999999999998764
No 6
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=3.4e-22 Score=199.08 Aligned_cols=159 Identities=19% Similarity=0.125 Sum_probs=127.7
Q ss_pred ccchHHHHHH---hCCChHhHHHHHhhhcCCc-----cCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 005192 431 RFKWLLEFSM---EHDWCAVVKKLLGILFDGT-----VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL 502 (709)
Q Consensus 431 R~r~lL~fAv---e~g~~aVvk~LLd~l~~ga-----v~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~ 502 (709)
..++|||+|+ ++|+.+++++||+..++.. ++.. . ...+..|+||||+|+.+|+.++|++||++|++++.
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~-~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP-F--RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA 121 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC-B--CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc-c--cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc
Confidence 3678999999 7899999999999854421 1110 0 01134799999999999999999999999999874
Q ss_pred CCC-------------Ccchhhhhhhhccc-------------ccccCCCCCCCCChHHHHHHhcCCh--------HHHH
Q 005192 503 DKP-------------GSRQKQLVDRAGSG-------------FIFKPNVIGPAGLTPLHVAACRDDA--------ENVL 548 (709)
Q Consensus 503 d~~-------------~~~~t~L~~a~~~~-------------~l~d~na~d~~G~TPLHlAA~~~~~--------e~Vv 548 (709)
... ..+.||||+|+..+ ...++|.+|..|+||||+|+..++. .+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 332 45799999996442 4568899999999999999976552 3588
Q ss_pred HHHhcCCCCCCccccc-------cccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 549 DALTDDPGSVGIEAWK-------SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 549 ~lLl~~p~~vGi~A~v-------NarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
++|++.+ +++ +.+|..|.||||+|+.+|+.+++++|+++..+..
T Consensus 202 ~~Ll~~g------a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 202 DLLLIKC------AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHH------HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhC------cccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9898774 556 7899999999999999999999999999988765
No 7
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.6e-21 Score=190.56 Aligned_cols=164 Identities=15% Similarity=0.045 Sum_probs=127.1
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC----
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKP---- 505 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~---- 505 (709)
....+|||+|+.+|+.+++++|++...+.. .... ...+..|.||||+|+.+|+.+++++|+++|++++....
T Consensus 35 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 110 (232)
T 2rfa_A 35 AMGETALHIAALYDNLEAAMVLMEAAPELV--FEPM--TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVF 110 (232)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCGGGG--GCCC--CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCchhc--cccc--cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce
Confidence 345789999999999999999999843321 0000 01134799999999999999999999999998773222
Q ss_pred --------Ccchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHH----HHHhcCCCCCCcccc
Q 005192 506 --------GSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVL----DALTDDPGSVGIEAW 563 (709)
Q Consensus 506 --------~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv----~lLl~~p~~vGi~A~ 563 (709)
..+.||||+|+..+. ..++|.+|..|+||||+|+..++.+ ++ ++|++.++.+.....
T Consensus 111 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~-~~~~i~~~Ll~~g~~~~~~~~ 189 (232)
T 2rfa_A 111 HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKT-FACQMYNLLLSYDGGDHLKSL 189 (232)
T ss_dssp SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHH-HHHHHHHHHHHTTCSCSSCCG
T ss_pred eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChH-HHHHHHHHHHhcCCchhhhhh
Confidence 257999999974433 3589999999999999999987654 55 888887632211111
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 564 KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 564 vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
.|.+|..|.||||+|+.+|+.+++++|+++.....
T Consensus 190 ~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 190 ELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred hccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 26899999999999999999999999999987755
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.87 E-value=7.1e-22 Score=197.03 Aligned_cols=168 Identities=22% Similarity=0.088 Sum_probs=124.9
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC---------
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV--------- 501 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~--------- 501 (709)
...||||+|+.+|+.+++++||+..++ ++.. +..|+||||+|++.|+.+++++|+++|++..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~-------~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (282)
T 1oy3_D 44 LGQTALHLAAILGEASTVEKLYAAGAG--VLVA-------ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLT 114 (282)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC--SSCC-------CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCC-------CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhh
Confidence 457899999999999999999998433 2222 3479999999999999999999999987621
Q ss_pred -------------------------------------CCCCCcchhhhhhhhcccc----------cccCCCCCCC-CCh
Q 005192 502 -------------------------------------LDKPGSRQKQLVDRAGSGF----------IFKPNVIGPA-GLT 533 (709)
Q Consensus 502 -------------------------------------~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~-G~T 533 (709)
......+.||||+|+..+. ..++|.++.. |+|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t 194 (282)
T 1oy3_D 115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT 194 (282)
T ss_dssp -----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred cccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 0122357899999975543 3578888865 999
Q ss_pred HHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeecCCC
Q 005192 534 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIPGS 611 (709)
Q Consensus 534 PLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i~~~ 611 (709)
|||+|+..++. +++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|++++++.. ..+|.+++.+..+
T Consensus 195 pL~~A~~~~~~-~~v~~Ll~~g------ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 195 PLHLAVEAQAA-SVLELLLKAG------ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHHHHcCCH-HHHHHHHHcC------CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 99999998765 5999999885 7789999999999999999999999999999977622 1567777776655
Q ss_pred ccc
Q 005192 612 IVD 614 (709)
Q Consensus 612 ~~~ 614 (709)
-.+
T Consensus 268 ~~~ 270 (282)
T 1oy3_D 268 DSD 270 (282)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.87 E-value=1.2e-21 Score=187.22 Aligned_cols=147 Identities=22% Similarity=0.113 Sum_probs=123.5
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
..++|||+|+..|+.++++.|++...+ ++.. +..|.||||+|+..|+.+++++|+++|++++. .+..+.|
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 103 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDK--LEDK-------DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKT 103 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccc--cccc-------cccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCc
Confidence 347899999999999999999998543 2221 34699999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRS-EIVKKLLELG------ADISARDLTGLTAEASARI 176 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHCC------CCCCCcCCCCCCHHHHHHH
Confidence 9999964433 358899999999999999998765 5899999875 6789999999999999999
Q ss_pred cCCHHHHHHHHHHh
Q 005192 581 RAHHSYIHLVQRKI 594 (709)
Q Consensus 581 rG~~~iieLLl~k~ 594 (709)
+|+.+++++|+++.
T Consensus 177 ~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 FGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hCcHHHHHHHHhcc
Confidence 99999999998764
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.87 E-value=1.3e-21 Score=195.02 Aligned_cols=152 Identities=22% Similarity=0.154 Sum_probs=124.7
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCc-cCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcc
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGT-VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 508 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~ga-v~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~ 508 (709)
...+||||+|+.+|+.+++++||+...+.. ++.. +..|+||||+|+..|+.++|++||++|++++. .+..+
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g 78 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-------NDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGG 78 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTS
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCC
Confidence 345789999999999999999999854422 2222 34799999999999999999999999998862 22356
Q ss_pred hhhhhhhhcccc---------------------------------------------------------cccCCCCCCCC
Q 005192 509 QKQLVDRAGSGF---------------------------------------------------------IFKPNVIGPAG 531 (709)
Q Consensus 509 ~t~L~~a~~~~~---------------------------------------------------------l~d~na~d~~G 531 (709)
.||||+|+..+. .+++|.++..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 899999964322 12478899999
Q ss_pred ChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 532 LTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 532 ~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~-G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
.||||+|+..++. +++++|++.+ +++|.+|.. |+||||+|+.+|+.+++++|++++++
T Consensus 159 ~t~L~~A~~~g~~-~~v~~Ll~~g------~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad 217 (282)
T 1oy3_D 159 HTPLHVAVIHKDA-EMVRLLRDAG------ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD 217 (282)
T ss_dssp CCHHHHHHHTTCH-HHHHHHHHHT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCHHHHHHHcCCH-HHHHHHHHcC------CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999998765 5899998875 677888865 99999999999999999999988665
No 11
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=1.1e-21 Score=197.70 Aligned_cols=158 Identities=17% Similarity=0.072 Sum_probs=126.6
Q ss_pred hccchHHHHHHhC---CChHhHHHHHhhhcCCc-----cCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC
Q 005192 430 KRFKWLLEFSMEH---DWCAVVKKLLGILFDGT-----VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV 501 (709)
Q Consensus 430 ~R~r~lL~fAve~---g~~aVvk~LLd~l~~ga-----v~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~ 501 (709)
....||||+|+.. |+.+++++||+..++.. ++... ...+..|+||||+|++.|+.++|++||++|++++
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 3468899999987 99999999999854321 11110 0113479999999999999999999999999987
Q ss_pred CCCC-------------Ccchhhhhhhhccc-------------ccccCCCCCCCCChHHHHHHhcCCh--------HHH
Q 005192 502 LDKP-------------GSRQKQLVDRAGSG-------------FIFKPNVIGPAGLTPLHVAACRDDA--------ENV 547 (709)
Q Consensus 502 ~d~~-------------~~~~t~L~~a~~~~-------------~l~d~na~d~~G~TPLHlAA~~~~~--------e~V 547 (709)
.... ..+.||||+|+..+ ...++|.+|..|+||||+|+..++. .++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 208 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence 3332 15799999996442 4467899999999999999997652 458
Q ss_pred HHHHhcCCCCCCcccccc-------ccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 548 LDALTDDPGSVGIEAWKS-------AQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 548 v~lLl~~p~~vGi~A~vN-------arD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+++|++.+ +++| .+|..|.||||+|+.+|+.+++++|++++++
T Consensus 209 v~~Ll~~g------a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 209 YNEILILG------AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp HHHHHHHH------HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHhh------hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 88898774 5565 5999999999999999999999999999884
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=2.5e-21 Score=178.87 Aligned_cols=141 Identities=17% Similarity=0.029 Sum_probs=113.3
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
+.++|++|+.+|..++++.|++...+. + .+..|.||||+|+..|+.+++++|+++|++++. .+..+.||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~--~--------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 70 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF--T--------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTP 70 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC--C--------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC--C--------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCH
Confidence 357899999999999999999984321 1 134688999999999999999999999988752 22346888
Q ss_pred hhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 005192 512 LVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~r 581 (709)
||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.+
T Consensus 71 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 71 LHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQ-EVVELLIKYG------ADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCccccCCCCCCHHHHHHHc
Confidence 988864332 347888999999999999998765 4888888875 67788999999999999999
Q ss_pred CCHHHHHHH
Q 005192 582 AHHSYIHLV 590 (709)
Q Consensus 582 G~~~iieLL 590 (709)
|+.+++++|
T Consensus 144 ~~~~i~~~L 152 (153)
T 1awc_B 144 GNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999887
No 13
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=4.3e-21 Score=186.33 Aligned_cols=153 Identities=18% Similarity=0.079 Sum_probs=124.8
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCcc
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA--PDNVLDKPGSR 508 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~g--Ad~~~d~~~~~ 508 (709)
...+|||+|+.+|+.++++.|++...+..++. ..+..|+||||+|+..|+.+++++|+++| ++++ ..+..+
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g 107 (228)
T 2dzn_A 35 DGRIPLHWSVSFQAHEITSFLLSKMENVNLDD------YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN-KITNQG 107 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGG------CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT-CCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccccccc------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-cCCcCC
Confidence 45789999999999999999999842222211 01347999999999999999999999999 5554 223346
Q ss_pred hhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHH
Q 005192 509 QKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 578 (709)
Q Consensus 509 ~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~A 578 (709)
.||||+|...+. ..++|.+|..|+||||+|+..++. +++++|++.+ .+++|.+|..|.||||+|
T Consensus 108 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g-----~~~~~~~d~~g~t~L~~A 181 (228)
T 2dzn_A 108 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL-KLIELLCGLG-----KSAVNWQDKQGWTPLFHA 181 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHTTT-----CCCSCCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHhcC-----cccccCcCCCCCCHHHHH
Confidence 899999975543 358899999999999999998765 5899998875 266799999999999999
Q ss_pred HHcCCHHHHHHHH-HHhhh
Q 005192 579 SLRAHHSYIHLVQ-RKINK 596 (709)
Q Consensus 579 a~rG~~~iieLLl-~k~~~ 596 (709)
+.+|+.+++++|+ +++++
T Consensus 182 ~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 182 LAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp HHTTCHHHHHHHHHHHCCC
T ss_pred HHcCCHHHHHHHHHhcCCC
Confidence 9999999999999 76665
No 14
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=2.1e-21 Score=178.90 Aligned_cols=145 Identities=21% Similarity=0.171 Sum_probs=118.1
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
|..++||+|+.+|..++++.||+. ....++.. +..|.||||+ +..|+.+++++|+++|++++. .+..+.|
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-------~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 70 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-ELVHPDAL-------NRFGKTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTS 70 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCC-------CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hCcCcccc-------CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCC
Confidence 346899999999999999999998 21122222 3468999999 999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|+||||+|+..++. +++++|++. ++++.+|.+|.||||+|+.
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-------~~~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT-AVVSFLAAE-------SDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCH-HHHHHHHTT-------SCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChH-HHHHHHHhc-------cCCCCcCCCCCCHHHHHHH
Confidence 9999975543 358899999999999999998765 488988875 3568899999999999999
Q ss_pred cCCHHHHHHHHHH
Q 005192 581 RAHHSYIHLVQRK 593 (709)
Q Consensus 581 rG~~~iieLLl~k 593 (709)
+|+.+++++|+++
T Consensus 143 ~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 143 RGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHhh
Confidence 9999999999875
No 15
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.86 E-value=3.8e-21 Score=180.85 Aligned_cols=146 Identities=23% Similarity=0.124 Sum_probs=121.4
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...++|++|+..|+.++++.|++..++ ++.. +..|.||||+|++.|+.+++++|+++|++++. .+..+.|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 82 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGAD--VNAE-------DASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMT 82 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCC
Confidence 346799999999999999999998433 2222 34689999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.
T Consensus 83 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 83 PLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL-EIVEVLLKNG------ADVNAQDKFGKTAFDISID 155 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCCCHHHHHHH
Confidence 9999975433 357889999999999999998765 4899998875 6779999999999999999
Q ss_pred cCCHHHHHHHHHH
Q 005192 581 RAHHSYIHLVQRK 593 (709)
Q Consensus 581 rG~~~iieLLl~k 593 (709)
+|+.+++++|+++
T Consensus 156 ~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 156 NGNEDLAEILQKL 168 (169)
T ss_dssp TTCHHHHHHHHTC
T ss_pred hCCHHHHHHHHHc
Confidence 9999999999865
No 16
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=8.2e-22 Score=179.40 Aligned_cols=126 Identities=21% Similarity=0.160 Sum_probs=110.2
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
....+|||+|+.+|+.++++.||+..++ ++.. +..|+||||+|+. |+.+++++|+++|++
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---------- 69 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLEAGAD--PNAL-------NRFGRRPIQVMMM-GSAQVAELLLLHGAE---------- 69 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTCCTTTTTSTT-SCHHHHHHHHHHTCC----------
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCC--cCCc-------CCCCCCHHHHHHc-CCHHHHHHHHHCCCC----------
Confidence 3457899999999999999999998433 2222 3479999999999 999999999999986
Q ss_pred hhhhhhhcccccccCCCCCCC-CChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPA-GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 588 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~-G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iie 588 (709)
+|.+|.. |+||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.+|+.++++
T Consensus 70 --------------~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~~~ 128 (136)
T 1d9s_A 70 --------------PNCADPATLTRPVHDAAREGFL-DTLVVLHRAG------ARLDVCDAWGRLPVDLAEEQGHRDIAR 128 (136)
T ss_dssp --------------SSCCBTTTTBCHHHHHHHHTCH-HHHHHHHHTC------CCCCCCSSSSSCHHHHHHHHTCHHHHH
T ss_pred --------------CCCcCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 7889999 99999999998765 5999999875 678999999999999999999999999
Q ss_pred HHHHHhhh
Q 005192 589 LVQRKINK 596 (709)
Q Consensus 589 LLl~k~~~ 596 (709)
+|+++++|
T Consensus 129 ~Ll~~Gad 136 (136)
T 1d9s_A 129 YLHAATGD 136 (136)
T ss_dssp HHHHHHCC
T ss_pred HHHHcCCC
Confidence 99998764
No 17
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=2.8e-21 Score=175.83 Aligned_cols=124 Identities=23% Similarity=0.205 Sum_probs=108.7
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
....++||+|+..|+.+++++||+..++ ++.. +..|.||||+|+.+|+.+++++|+++|++
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------- 72 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD--VNAK-------DEYGLTPLYLATAHGHLEIVEVLLKNGAD---------- 72 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC--CCCc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------
Confidence 4457899999999999999999998433 2222 34699999999999999999999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 589 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieL 589 (709)
+|.+|..|.||||+|+..++. +++++|++.+ ++++.+|.+|.||||+|+.+|+.+++++
T Consensus 73 --------------~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 131 (136)
T 2jab_A 73 --------------VNAVDAIGFTPLHLAAFIGHL-EIAEVLLKHG------ADVNAQDKFGKTAFDISIGNGNEDLAEI 131 (136)
T ss_dssp --------------TTCCCTTCCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------CCcCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCcCcCCCCCCHHHHHHHCCCHHHHHH
Confidence 688999999999999998765 5899999875 6789999999999999999999999999
Q ss_pred HHHH
Q 005192 590 VQRK 593 (709)
Q Consensus 590 Ll~k 593 (709)
|+++
T Consensus 132 Ll~~ 135 (136)
T 2jab_A 132 LQKL 135 (136)
T ss_dssp HHHC
T ss_pred HHHc
Confidence 9875
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.85 E-value=4.4e-21 Score=191.75 Aligned_cols=151 Identities=17% Similarity=0.150 Sum_probs=125.7
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCcc
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDKPGSR 508 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gA-d~~~d~~~~~ 508 (709)
....||||+|+.+|+.+++++||+..++ ++.. +..|+||||+|+..|+.+++++|+++++ +++ ..+..+
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g 124 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLEASAD--ANIQ-------DNMGRTPLHAAVSADAQGVFQILIRNRATDLD-ARMHDG 124 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT-CCCTTC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCC
Confidence 3457899999999999999999998433 2222 3469999999999999999999999987 443 223456
Q ss_pred hhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHH
Q 005192 509 QKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 578 (709)
Q Consensus 509 ~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~A 578 (709)
.||||+|+..+. ..++|.+|..|+||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~g------a~~~~~~~~g~tpL~~A 197 (253)
T 1yyh_A 125 TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKNG------ANKDMQNNREETPLFLA 197 (253)
T ss_dssp CCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHH
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHH
Confidence 899999964433 3588999999999999999997654 899999885 67899999999999999
Q ss_pred HHcCCHHHHHHHHHHhhhc
Q 005192 579 SLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 579 a~rG~~~iieLLl~k~~~~ 597 (709)
+.+|+.+++++|++++++.
T Consensus 198 ~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 198 AREGSYETAKVLLDHFANR 216 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCT
T ss_pred HHCCCHHHHHHHHHcCCCc
Confidence 9999999999999987653
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.85 E-value=3.5e-21 Score=188.20 Aligned_cols=150 Identities=20% Similarity=0.143 Sum_probs=121.0
Q ss_pred cchHHHHHHhCCChHhHHHHHhh-hcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC----CCCCC
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGI-LFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV----LDKPG 506 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~-l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~----~d~~~ 506 (709)
++||||+|+.+|+.++++.||+. .++ ++.. +..|+||||+|+..|+.++|++|+++|++.. ...+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~--~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCE--VHQR-------GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCC--cccC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC
Confidence 46899999999999999999986 222 2222 3479999999999999999999999998753 12233
Q ss_pred cchhhhhhhhcccc----------cccCCCCCC-------------CCChHHHHHHhcCChHHHHHHHhcCCCCCCcccc
Q 005192 507 SRQKQLVDRAGSGF----------IFKPNVIGP-------------AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 563 (709)
Q Consensus 507 ~~~t~L~~a~~~~~----------l~d~na~d~-------------~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~ 563 (709)
.+.||||+|+..+. ..+++.++. .|.||||+|+..++. +++++|++.+ ++
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~ 146 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE-EIVRLLIEHG------AD 146 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH-HHHHHHHHTT------CC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCH-HHHHHHHHCC------CC
Confidence 57899999975433 246666655 799999999999765 5999999885 77
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHH----HHHHHHhhhc
Q 005192 564 KSAQDSTGLTPNDYASLRAHHSYI----HLVQRKINKK 597 (709)
Q Consensus 564 vNarD~~G~TPLh~Aa~rG~~~ii----eLLl~k~~~~ 597 (709)
+|.+|.+|.||||+|+.+|+.+++ ++|+++.++.
T Consensus 147 ~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 147 IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 899999999999999999999988 7777666543
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=8.3e-21 Score=185.07 Aligned_cols=149 Identities=17% Similarity=0.094 Sum_probs=125.3
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.++++.|++..++ ++.. +..|.||||+|+..|+.+++++|+++|++++. .+..+.|
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 108 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQLGVP--VNDK-------DDAGWSPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCT 108 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC--SCCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCC--CCCc-------CCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCC
Confidence 357899999999999999999998433 2222 34689999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|...+. ..+++.+|..|.||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.
T Consensus 109 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~ 181 (231)
T 3aji_A 109 PLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK-MVHILLFYK------ASTNIQDTEGNTPLHLACD 181 (231)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhcC------CCccccCCCCCCHHHHHHH
Confidence 9999975433 3478999999999999999997655 899999875 6789999999999999999
Q ss_pred cCCHHHHHHHHHHhhh
Q 005192 581 RAHHSYIHLVQRKINK 596 (709)
Q Consensus 581 rG~~~iieLLl~k~~~ 596 (709)
+|+.+++++|++++++
T Consensus 182 ~~~~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 182 EERVEEAKFLVTQGAS 197 (231)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHCCCC
Confidence 9999999999988665
No 21
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=9.5e-21 Score=166.53 Aligned_cols=125 Identities=29% Similarity=0.265 Sum_probs=109.2
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
++++||+|+.+|+.++++.|++...+ ++.. +..|.||||+|+..|+.+++++|+++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------ 60 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD--VNAK-------DKNGRTPLHLAARNGHLEVVKLLLEAGAD------------ 60 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC--TTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCC--CCCc-------CCCCCcHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 36899999999999999999998433 2221 34689999999999999999999999976
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 591 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl 591 (709)
++.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+..|+.+++++|+
T Consensus 61 ------------~~~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 121 (126)
T 1n0r_A 61 ------------VNAKDKNGRTPLHLAARNGHL-EVVKLLLEAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121 (126)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CcccCCCCCcHHHHHHHcChH-HHHHHHHHcC------CCCcccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 678899999999999998765 5899999875 677999999999999999999999999999
Q ss_pred HHhhh
Q 005192 592 RKINK 596 (709)
Q Consensus 592 ~k~~~ 596 (709)
+++++
T Consensus 122 ~~Gad 126 (126)
T 1n0r_A 122 EAGAY 126 (126)
T ss_dssp HHTCC
T ss_pred HcCCC
Confidence 98764
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=1.1e-20 Score=183.30 Aligned_cols=152 Identities=21% Similarity=0.099 Sum_probs=124.8
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.++++.|++.... .++.. +..|.||||+|++.++.+++++|+++|++++. .+..+.|
T Consensus 57 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t 127 (223)
T 2f8y_A 57 MGRTPLHAAVSADAQGVFQILIRNRAT-DLDAR-------MHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKS 127 (223)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHBTTS-CTTCC-------CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCB
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccC-------CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCc
Confidence 457899999999999999999997321 11211 34689999999999999999999999998762 1234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~ 200 (223)
T 2f8y_A 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY-ETAKVLLDHF------ANRDITDHMDRLPRDIAQE 200 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCH-HHHHHHHHcC------CCCccccccCCCHHHHHHH
Confidence 9999975433 358899999999999999998765 4899999885 6779999999999999999
Q ss_pred cCCHHHHHHHHHHhhhcC
Q 005192 581 RAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 581 rG~~~iieLLl~k~~~~~ 598 (709)
+|+.+++++|+++.+++.
T Consensus 201 ~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 201 RMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TTCHHHHHHHHHTTCSSC
T ss_pred hcchHHHHHHHHcCCCcc
Confidence 999999999999887654
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=9.9e-21 Score=183.53 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=125.4
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCcc
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDKPGSR 508 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gA-d~~~d~~~~~ 508 (709)
....+|||+|+.+|+.++++.||+..++ ++.. +..|+||||+|+..|+.+++++|+++++ +.+ .....+
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g 92 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASAD--ANIQ-------DNMGRTPLHAAVSADAQGVFQILIRNRATDLD-ARMHDG 92 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTT-CCCTTC
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCC--CCCc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCC
Confidence 3457899999999999999999998433 2222 3478999999999999999999999987 433 233456
Q ss_pred hhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHH
Q 005192 509 QKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 578 (709)
Q Consensus 509 ~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~A 578 (709)
.||||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ +++|.+|..|.||||+|
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A 165 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV-DAAVVLLKNG------ANKDMQNNREETPLFLA 165 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTCCCHHHHH
T ss_pred CcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCcCHHHHH
Confidence 899999964433 357899999999999999998765 4899999885 67899999999999999
Q ss_pred HHcCCHHHHHHHHHHhhhc
Q 005192 579 SLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 579 a~rG~~~iieLLl~k~~~~ 597 (709)
+.+|+.+++++|+++.++.
T Consensus 166 ~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 166 AREGSYETAKVLLDHFANR 184 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCC
Confidence 9999999999999886653
No 24
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.85 E-value=1.1e-20 Score=180.43 Aligned_cols=147 Identities=16% Similarity=0.151 Sum_probs=121.2
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCcch
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLL-NYAPDNVLDKPGSRQ 509 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL-~~gAd~~~d~~~~~~ 509 (709)
...+|||+|+.+|+.+++++||+..++ ++.. +..|.||||+|+..|+.+++++|+ ..+++++ ..+..+.
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~g~ 107 (201)
T 3hra_A 38 EGNTPLNIAVHNNDIEIAKALIDRGAD--INLQ-------NSISDSPYLYAGAQGRTEILAYMLKHATPDLN-KHNRYGG 107 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT-CCCTTSC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHhccCcccc-cccCCCC
Confidence 357899999999999999999998433 2222 346899999999999999999999 5555654 2233468
Q ss_pred hhhhhhhcccc----------c-ccCCCCCCCCChHHHHHHhcCC----hHHHHHHHhcCCCCCCccccccccCCCCCCH
Q 005192 510 KQLVDRAGSGF----------I-FKPNVIGPAGLTPLHVAACRDD----AENVLDALTDDPGSVGIEAWKSAQDSTGLTP 574 (709)
Q Consensus 510 t~L~~a~~~~~----------l-~d~na~d~~G~TPLHlAA~~~~----~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TP 574 (709)
||||+|+..+. . .++|.+|..|+||||+|+..++ ..+++++|++.+ +++|.+|..|.||
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g------a~~~~~~~~g~t~ 181 (201)
T 3hra_A 108 NALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG------ADQSIKDNSGRTA 181 (201)
T ss_dssp CSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT------CCTTCCCTTSCCH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC------CCCCccCCCCCCH
Confidence 99999975543 2 5789999999999999998875 156999999885 7789999999999
Q ss_pred HHHHHHcCCHHHHHHHHHH
Q 005192 575 NDYASLRAHHSYIHLVQRK 593 (709)
Q Consensus 575 Lh~Aa~rG~~~iieLLl~k 593 (709)
||+|+.+|+.+++++|+++
T Consensus 182 l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 182 MDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHcCCHhHHHHHHhc
Confidence 9999999999999999875
No 25
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.85 E-value=3.9e-21 Score=179.08 Aligned_cols=126 Identities=25% Similarity=0.196 Sum_probs=82.6
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...++|+.|+.+|+.++++.|++. +..+... .+..|+||||+|+..|+.+++++|+++|+++
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~---~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------- 68 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTV---QSVNCRD-----IEGRQSTPLHFAAGYNRVSVVEYLLQHGADV---------- 68 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCT---TTTTCCC-----TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHc---CCCCccc-----cccCCCCHHHHHHHcChHHHHHHHHhcCCCC----------
Confidence 346799999999999999999986 2222221 1346889999999999999999999999874
Q ss_pred hhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 005192 511 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 590 (709)
Q Consensus 511 ~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLL 590 (709)
|.+|..|+||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|
T Consensus 69 --------------~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 69 --------------HAKDKGGLVPLHNACSYGHYE-VAELLVKHG------AVVNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp --------------TCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred --------------CccCCCCCCHHHHHHHcCcHH-HHHHHHhCC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 445555555555555544332 455555443 34455555555555555555555555555
Q ss_pred HHHhh
Q 005192 591 QRKIN 595 (709)
Q Consensus 591 l~k~~ 595 (709)
+++.+
T Consensus 128 l~~ga 132 (165)
T 3twr_A 128 LQHGA 132 (165)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 55433
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.84 E-value=7.2e-21 Score=191.43 Aligned_cols=160 Identities=15% Similarity=0.001 Sum_probs=130.4
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...||||+|+.+|+.++++.|++..++ ++.. +..|.||||+|+..|+.+++++|+++|++.+.+. .+.|
T Consensus 35 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t 103 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVKILLKHGAQ--VNGV-------TADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLAS 103 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCC
Confidence 457899999999999999999998433 2222 3479999999999999999999999999876433 3689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ +++|. |..|.||||+|+.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~-~~~g~t~Lh~A~~ 175 (261)
T 2xai_A 104 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR-ACVKKLLESG------ADVNQ-GKGQDSPLHAVAR 175 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH-HHHHHHHHHT------CCTTC-CBTTBCHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH-HHHHHHHHcC------CCCCC-CCCCCChHHHHHH
Confidence 9999975543 358899999999999999998765 5899998875 56674 8999999999999
Q ss_pred cCCHHHHHHHHHHhhhcC--CCCCeeEeecC
Q 005192 581 RAHHSYIHLVQRKINKKS--SESGRVILDIP 609 (709)
Q Consensus 581 rG~~~iieLLl~k~~~~~--~~~~~v~~~i~ 609 (709)
+|+.+++++|++++++.. ..+|.+++++.
T Consensus 176 ~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 176 TASEELACLLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCChhhhc
Confidence 999999999999877632 13566666654
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=1.7e-20 Score=191.97 Aligned_cols=151 Identities=26% Similarity=0.186 Sum_probs=122.7
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCC-C------
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D------ 503 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~-d------ 503 (709)
...+|||+|+.+|+.+++++|++..++ ++.. +..|.||||+|+.+|+.+++++|+++|++.+. +
T Consensus 90 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 90 GGLVPLHNACSYGHYEVTELLLKHGAC--VNAM-------DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCcHHHHHHHCCCHHHHHHHHHCCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcc
Confidence 356799999999999999999887333 2221 34689999999999999999999999988652 1
Q ss_pred ----------------------------------------------CCCcchhhhhhhhcccc-------------cccC
Q 005192 504 ----------------------------------------------KPGSRQKQLVDRAGSGF-------------IFKP 524 (709)
Q Consensus 504 ----------------------------------------------~~~~~~t~L~~a~~~~~-------------l~d~ 524 (709)
....+.||||+|...+. ..++
T Consensus 161 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred hHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence 12335689999864421 3588
Q ss_pred CCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 525 NVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 525 na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
|.+|..|+||||+|+..++. +++++|++.+ +++|.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g------a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHN-DVMEVLHKHG------AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCcCCCCCCHHHHHHHcCCH-HHHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 99999999999999999765 5999999885 778999999999999999999999999999987763
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=8.2e-21 Score=192.14 Aligned_cols=162 Identities=17% Similarity=0.091 Sum_probs=126.9
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+..|+.+++++||+..++ ++.. +..|.||||+|+..|+.++|++|+++|++.+. .+..+.|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~-------~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t 141 (299)
T 1s70_B 72 DGLTALHQACIDDNVDMVKFLVENGAN--INQP-------DNEGWIPLHAAASCGYLDIAEYLISQGAHVGA-VNSEGDT 141 (299)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCC-------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCC
Confidence 357899999999999999999998433 2222 34699999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc-----------cc--------------------------cCCCCCCCCChHHHHHHhcCChHHHHHHHhc
Q 005192 511 QLVDRAGSGF-----------IF--------------------------KPNVIGPAGLTPLHVAACRDDAENVLDALTD 553 (709)
Q Consensus 511 ~L~~a~~~~~-----------l~--------------------------d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~ 553 (709)
|||+|...+. .+ .....+..|.||||+||..++. +++++|++
T Consensus 142 ~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~ 220 (299)
T 1s70_B 142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT-EVLKLLIQ 220 (299)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH-HHHHHHHT
T ss_pred HHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcH-HHHHHHHH
Confidence 9999853321 01 1233567899999999999765 49999998
Q ss_pred CCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeecC
Q 005192 554 DPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 609 (709)
Q Consensus 554 ~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i~ 609 (709)
.+ +++|.+|..|.||||+|+.+|+.+++++|++++++.. ...|.+++++.
T Consensus 221 ~g------~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 221 AR------YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred cC------CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 75 7789999999999999999999999999999876532 13455555554
No 29
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.84 E-value=3.8e-21 Score=189.19 Aligned_cols=152 Identities=16% Similarity=0.100 Sum_probs=125.8
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC-----CCCC
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-----LDKP 505 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~-----~d~~ 505 (709)
...+|||+|+.+|+.+++++||+..++ ++.. +..|+||||+|++.|+.+++++|+++|++.+ ...+
T Consensus 44 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAEALLGAGCD--PELR-------DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHCCCSCCCC--SCCC-------CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCc-------CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC
Confidence 457899999999999999999998433 2222 3479999999999999999999999997532 2233
Q ss_pred Ccchhhhhhhhcccc----------cccCCCCCC-CCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCH
Q 005192 506 GSRQKQLVDRAGSGF----------IFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP 574 (709)
Q Consensus 506 ~~~~t~L~~a~~~~~----------l~d~na~d~-~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TP 574 (709)
..+.||||+|+..+. ..++|.++. .|+||||+|+..++. +++++|++.+ ++++.+|..|.||
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~tp 187 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNP-DLVSLLLKCG------ADVNRVTYQGYSP 187 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHTTT------CCSCCCCTTCCCG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCcccCCCCCH
Confidence 457899999975543 358899987 999999999998765 5899999885 7789999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 575 NDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 575 Lh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
||+|+.+|+.+++++|++++++..
T Consensus 188 l~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 188 YQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp GGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHHccCchHHHHHHHHcchhhh
Confidence 999999999999999999888654
No 30
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=2.6e-21 Score=192.71 Aligned_cols=159 Identities=18% Similarity=0.030 Sum_probs=123.4
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHc---CCHHHHHHHHhcCCCCCC------
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVL------ 502 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~---g~~eIVelLL~~gAd~~~------ 502 (709)
.+++||+|+.+|+.++++.|++.+.+...+.... ....+..|+||||+|+.+ |+.++|++||++|++.+.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~-~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDS-AYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSG-GGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccc-cccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 3689999999999986665555433322222110 000145799999999999 999999999999986541
Q ss_pred ----CCCCcchhhhhhhhcccc----------cccCCCCCCC-------------CChHHHHHHhcCChHHHHHHHhc--
Q 005192 503 ----DKPGSRQKQLVDRAGSGF----------IFKPNVIGPA-------------GLTPLHVAACRDDAENVLDALTD-- 553 (709)
Q Consensus 503 ----d~~~~~~t~L~~a~~~~~----------l~d~na~d~~-------------G~TPLHlAA~~~~~e~Vv~lLl~-- 553 (709)
+.+..+.||||+|+..+. ..++|.++.. |.||||+|+..++. +++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW-DVVTYLLENP 159 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH-HHHHHHHHCS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCH-HHHHHHHhcc
Confidence 223457999999975543 3578888886 99999999998765 59999998
Q ss_pred -CCCCCCccccccccCCCCCCHHHHHHH--cCCHH-------HHHHHHHHhhhcC
Q 005192 554 -DPGSVGIEAWKSAQDSTGLTPNDYASL--RAHHS-------YIHLVQRKINKKS 598 (709)
Q Consensus 554 -~p~~vGi~A~vNarD~~G~TPLh~Aa~--rG~~~-------iieLLl~k~~~~~ 598 (709)
.+ +++|.+|.+|+||||+|+. +|+.+ ++++|++++++..
T Consensus 160 ~~g------a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 160 HQP------ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp SCC------CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccC------CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcc
Confidence 54 7889999999999999999 88888 9999999988864
No 31
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=1.4e-20 Score=188.08 Aligned_cols=147 Identities=21% Similarity=0.110 Sum_probs=122.6
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.+++++|++.... .++.. +..|.||||+|++.|+.+++++|+++|++++. .+..+.|
T Consensus 89 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t 159 (253)
T 1yyh_A 89 MGRTPLHAAVSADAQGVFQILIRNRAT-DLDAR-------MHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKS 159 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHSTTS-CTTCC-------CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC-BCTTSCB
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-Ccccc-------CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC-cCCCCCC
Confidence 457899999999999999999998321 12211 34799999999999999999999999998762 1234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~ 232 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY-ETAKVLLDHF------ANRDITDHMDRLPRDIAQE 232 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCH-HHHHHHHHcC------CCccccccCCCCHHHHHHH
Confidence 9999974433 358999999999999999998765 5999999885 7789999999999999999
Q ss_pred cCCHHHHHHHHHH
Q 005192 581 RAHHSYIHLVQRK 593 (709)
Q Consensus 581 rG~~~iieLLl~k 593 (709)
+||.+++++|...
T Consensus 233 ~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 233 RMHHDIVRLLDLE 245 (253)
T ss_dssp TTCHHHHHHHHC-
T ss_pred cCCHHHHHHHHHH
Confidence 9999999999865
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.83 E-value=3.4e-20 Score=179.99 Aligned_cols=147 Identities=18% Similarity=0.010 Sum_probs=121.9
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCcchh
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV--LDKPGSRQK 510 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~--~d~~~~~~t 510 (709)
.+|||+|+..|..++++.||+...+. .+. .+..|.||||+|++.|+.+++++|+++|++.+ ...+..+.|
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t 74 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSL-LLQ-------KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 74 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGG-TTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCC
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccc-ccc-------CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCC
Confidence 57999999999999999999983221 111 13479999999999999999999999995544 224556789
Q ss_pred hhhhhhcccc------------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHH
Q 005192 511 QLVDRAGSGF------------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 578 (709)
Q Consensus 511 ~L~~a~~~~~------------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~A 578 (709)
|||+|+..+. ..+++.++..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g------~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF-EVSQFLIENG------ASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCSCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCH-hHHHHHHHcC------CCccccCCCCCCHHHHH
Confidence 9999963322 257888999999999999998765 5899999875 67899999999999999
Q ss_pred HHcCCHHHHHHHHHHh
Q 005192 579 SLRAHHSYIHLVQRKI 594 (709)
Q Consensus 579 a~rG~~~iieLLl~k~ 594 (709)
+.+|+.+++++|+++.
T Consensus 148 ~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLG 163 (228)
T ss_dssp HHTTCHHHHHHHHTTT
T ss_pred HHcCCHHHHHHHHhcC
Confidence 9999999999999876
No 33
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.83 E-value=2.6e-20 Score=193.06 Aligned_cols=162 Identities=15% Similarity=0.030 Sum_probs=124.1
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCC-chhhhcCcccHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCc
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHT-SSELAILEMGLLHKAVRRNCRPMVELLLN-YAPDNVLDKPGS 507 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s-~~~~~~~G~TpLH~AV~~g~~eIVelLL~-~gAd~~~d~~~~ 507 (709)
..+.||||+|+..|+.+++++|++..++.+....... .......|.||||+|+++|+.++|++||+ .|++++. .+..
T Consensus 123 ~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~-~d~~ 201 (337)
T 4g8k_A 123 FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA-CDNM 201 (337)
T ss_dssp TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC-CCTT
T ss_pred cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc-cCCC
Confidence 3457899999999999999999998544321111000 11124579999999999999999999995 6888762 2233
Q ss_pred chhhhhhhhcc--------------cccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCC
Q 005192 508 RQKQLVDRAGS--------------GFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLT 573 (709)
Q Consensus 508 ~~t~L~~a~~~--------------~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~T 573 (709)
+.|+|+.+... ....++|.+|..|+||||+||..++.+ +++.|+... ++++|++|.+|+|
T Consensus 202 g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~-~v~~Ll~~~-----~~~vn~~d~~G~T 275 (337)
T 4g8k_A 202 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQE-----HIEINDTDSDGKT 275 (337)
T ss_dssp SCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHH-HHHHHHTST-----TCCTTCBCTTSCB
T ss_pred CCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhH-HHHHHHHhc-----CCcccCcCCCCCC
Confidence 57788765311 113589999999999999999987655 778787653 2778999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 574 PNDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 574 PLh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
|||+|+.+|+.+++++|++++++..
T Consensus 276 pL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 276 ALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999887654
No 34
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=2.2e-20 Score=195.73 Aligned_cols=118 Identities=14% Similarity=0.038 Sum_probs=101.1
Q ss_pred hcCcccHHHHHHHcC--CHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------ccc-----CCCCCCCCCh
Q 005192 471 AILEMGLLHKAVRRN--CRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFK-----PNVIGPAGLT 533 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g--~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d-----~na~d~~G~T 533 (709)
+..|.||||+|+..| +.++|++||++|++++. .+..+.||||+|+..+. ..+ +|.+|..|+|
T Consensus 135 ~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 135 HCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 346899999999999 99999999999998762 22346899999975543 124 8999999999
Q ss_pred HHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 534 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 534 PLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
|||+||..++. +++++|++.+ |++|.+|..|.||||+|+.+|+.+++++|+++.++
T Consensus 214 ~L~~A~~~g~~-~~v~~Ll~~g------ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 214 HLHWAILINWE-DVAMRFVEMG------IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp TTHHHHTTTCH-HHHHHHHTTT------CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred HHHHHHHcCCH-HHHHHHHHcC------CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence 99999998765 5999999885 77899999999999999999999999999998665
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=1.7e-20 Score=191.70 Aligned_cols=149 Identities=19% Similarity=0.098 Sum_probs=121.6
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHH-----HcCCHHHHHHHHhcCCCCCCCCC
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAV-----RRNCRPMVELLLNYAPDNVLDKP 505 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV-----~~g~~eIVelLL~~gAd~~~d~~ 505 (709)
.+.||||+|+.+|+.+++++||+..+. .++.. +..|.||||+|+ ..++.+++++|+++|++.+ ..+
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~-~~~~~-------~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~ 180 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVC-KVDKQ-------NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA-KAS 180 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCC-CTTCC-------CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC-CCT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCC-cCCCC-------CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc-ccC
Confidence 457899999999999999999998331 12211 346889999999 7788999999999987654 222
Q ss_pred Ccchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhc-CCCCCCccccccccCCCCCCH
Q 005192 506 GSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTD-DPGSVGIEAWKSAQDSTGLTP 574 (709)
Q Consensus 506 ~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~-~p~~vGi~A~vNarD~~G~TP 574 (709)
..+.||||+|+..+. ..++|.+|..|+||||+|+..++. +++++|++ .+ +++|.+|.+|.||
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~-~iv~~Ll~~~g------ad~~~~d~~g~Tp 253 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHK-EIAGLLLAVPS------CDISLTDRDGSTA 253 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHTSTT------CCTTCCCTTSCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCH-HHHHHHHhcCC------CCCcCcCCCCCCH
Confidence 346899999975443 358999999999999999999765 58999998 44 7789999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHhh
Q 005192 575 NDYASLRAHHSYIHLVQRKIN 595 (709)
Q Consensus 575 Lh~Aa~rG~~~iieLLl~k~~ 595 (709)
||+|+.+|+.+++++|+++.+
T Consensus 254 L~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 254 LMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHhccC
Confidence 999999999999999998854
No 36
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=2.3e-20 Score=191.19 Aligned_cols=129 Identities=21% Similarity=0.173 Sum_probs=83.2
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcC
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRD 542 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~ 542 (709)
.|+||||+|++.|+.++|++||++|++.+. ....+.|||+++...+. ..++|.+|..|+||||+||..+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 355555555555555555555555554331 11223455555532211 2357888888888888888887
Q ss_pred ChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeecC
Q 005192 543 DAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 609 (709)
Q Consensus 543 ~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i~ 609 (709)
+.+ ++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|++++++.. ..+|.++|.+.
T Consensus 164 ~~~-~v~~Ll~~g------advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 164 HHE-LVALLLQHG------ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp CGG-GHHHHHHTT------CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred CHH-HHHHHHHCC------CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 654 788888775 6778888888888888888888888888888766521 13566666664
No 37
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=2.1e-20 Score=182.13 Aligned_cols=149 Identities=19% Similarity=0.074 Sum_probs=125.3
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.+++++|++..++ ++.. +..|.||||+|+.+|+.+++++|+++|++.+. .+..+.|
T Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t 141 (231)
T 3aji_A 72 AGWSPLHIAASAGXDEIVKALLVKGAH--VNAV-------NQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-KDHYDAT 141 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHcCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCc
Confidence 357899999999999999999998433 2221 34689999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV-EEAKFLVTQG------ASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCSCCCCTTSCCHHHHSCH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCH-HHHHHHHHCC------CCCCCCCCCCCCHHHHHHh
Confidence 9999974433 358899999999999999998765 5899999885 7789999999999999999
Q ss_pred cCCHHHHHHHHHHhhh
Q 005192 581 RAHHSYIHLVQRKINK 596 (709)
Q Consensus 581 rG~~~iieLLl~k~~~ 596 (709)
+|+.+++++|+++.++
T Consensus 215 ~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 215 GLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHcccccc
Confidence 9999999999987654
No 38
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.83 E-value=3.5e-20 Score=189.73 Aligned_cols=159 Identities=16% Similarity=0.007 Sum_probs=128.2
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
.+.||||+|+.+|+.+++++|++..++ ++.. +..|.||||+|+..|+.++|++|+++|++.+.+. .+.|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t 159 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQ--VNGV-------TADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLAS 159 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC--SSCC-------CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCC--CCCC-------CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCC
Confidence 457899999999999999999998433 2222 3478999999999999999999999999876443 3689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ +++| +|..|.||||+|+.
T Consensus 160 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~-~~~~g~t~L~~A~~ 231 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR-ACVKKLLESG------ADVN-QGKGQDSPLHAVVR 231 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH-HHHHHHHHTT------CCTT-CCBTTBCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHCC------CCCC-CCCCCCCHHHHHHH
Confidence 9999975433 358899999999999999998765 5899999875 5667 48999999999999
Q ss_pred cCCHHHHHHHHHHhhhcC--CCCCeeEeec
Q 005192 581 RAHHSYIHLVQRKINKKS--SESGRVILDI 608 (709)
Q Consensus 581 rG~~~iieLLl~k~~~~~--~~~~~v~~~i 608 (709)
+|+.+++++|+++.++.. ..+|.+++++
T Consensus 232 ~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 261 (285)
T 3d9h_A 232 TASEELACLLMDFGADTQAKNAEGKRPVEL 261 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 999999999999866522 1234444444
No 39
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=5e-20 Score=179.88 Aligned_cols=150 Identities=16% Similarity=0.041 Sum_probs=123.8
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCC
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP----DNVLDKPG 506 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gA----d~~~d~~~ 506 (709)
...+|||+|+.+|+.+++++|++..++ ++.. +..|.||||+|++.|+.+++++|+++++ +++ ..+.
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~ 114 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVTAGAS--PMAL-------DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE-ARNY 114 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-CCCT
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCC--cccc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-ccCc
Confidence 357899999999999999999998433 2221 3468999999999999999999999987 333 2233
Q ss_pred cchhhhhhhhcccc----------cccCCCCC-CCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHH
Q 005192 507 SRQKQLVDRAGSGF----------IFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 575 (709)
Q Consensus 507 ~~~t~L~~a~~~~~----------l~d~na~d-~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPL 575 (709)
.+.||||+|...+. ..+++.++ ..|.||||+|+..++. +++++|++.+ +++|.+|..|.|||
T Consensus 115 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 115 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL-SMVQLLLQHG------ANVNAQMYSGSSAL 187 (241)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCBCTTSCBHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCCCHH
Confidence 56899999974433 34788888 8899999999998765 4899999885 77899999999999
Q ss_pred HHHHHcCCHHHHHHHHHHhhhc
Q 005192 576 DYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 576 h~Aa~rG~~~iieLLl~k~~~~ 597 (709)
|+|+.+|+.+++++|++++++.
T Consensus 188 ~~A~~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHhcCCCC
Confidence 9999999999999999886653
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=5.6e-20 Score=179.53 Aligned_cols=153 Identities=19% Similarity=0.123 Sum_probs=124.3
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.++++.|++.+.+...+... .+..|+||||+|+..|+.+++++|+++|++.+. .+..+.|
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 81 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI-----YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQT 81 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCc-----ccccCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCC
Confidence 3578999999999999999999864433222211 134699999999999999999999999998762 2335689
Q ss_pred hhhhhhcccc----------c----ccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccC-CCCCCHH
Q 005192 511 QLVDRAGSGF----------I----FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPN 575 (709)
Q Consensus 511 ~L~~a~~~~~----------l----~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD-~~G~TPL 575 (709)
|||+|+..+. . ++++.+|..|.||||+|+..++. +++++|++.+ ++++.+| ..|.|||
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g------~~~~~~~~~~g~t~L 154 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ-ETVQLLLERG------ADIDAVDIKSGRSPL 154 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCCCTTTCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCH-HHHHHHHHcC------CCcccccccCCCcHH
Confidence 9999964433 1 27888999999999999998765 5899998875 6678888 8899999
Q ss_pred HHHHHcCCHHHHHHHHHHhhh
Q 005192 576 DYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 576 h~Aa~rG~~~iieLLl~k~~~ 596 (709)
|+|+.+|+.+++++|+++..+
T Consensus 155 ~~A~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 155 IHAVENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999988655
No 41
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.83 E-value=1.1e-20 Score=179.11 Aligned_cols=151 Identities=19% Similarity=0.105 Sum_probs=101.5
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
+.++|+.|+..|+.++++.||+. +..+... .+..|+||||+|+..|+.+++++|+++|++++. .+..+.||
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~---~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 75 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDN---TENDLNQ-----GDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTP 75 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHC---TTSCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhc---Ccccccc-----cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCH
Confidence 34689999999999999999987 2211111 134689999999999999999999999987541 11234566
Q ss_pred hhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 005192 512 LVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~r 581 (709)
||+|+..+. ..++|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+..
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 76 LHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD-QVAEDLVANG------ALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCSSBCCTTSCCGGGGSCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHCC------CCcchhccCCCCcHHHHHHH
Confidence 666653322 235666667777777777766543 3666666654 55566777777777777776
Q ss_pred CCHHHHHHHHHHhhhcC
Q 005192 582 AHHSYIHLVQRKINKKS 598 (709)
Q Consensus 582 G~~~iieLLl~k~~~~~ 598 (709)
++.+++++|+++.++..
T Consensus 149 ~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 149 LRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHhhcCcc
Confidence 66677776666655533
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=6.5e-21 Score=191.93 Aligned_cols=159 Identities=21% Similarity=0.090 Sum_probs=126.3
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHc---CCHHHHHHHHhcCCCC-------C
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDN-------V 501 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~---g~~eIVelLL~~gAd~-------~ 501 (709)
.+++||+|+.+|..++++.||+.+.+...+..+. ....+..|+||||+|+.. |+.++|++||++|++. +
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDS-EFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSG-GGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCc-ccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 4789999999999999999999765433222110 001144799999999986 9999999999998652 2
Q ss_pred ---CCCCCcchhhhhhhhcccc----------cccCCCCCC--------------CCChHHHHHHhcCChHHHHHHHhc-
Q 005192 502 ---LDKPGSRQKQLVDRAGSGF----------IFKPNVIGP--------------AGLTPLHVAACRDDAENVLDALTD- 553 (709)
Q Consensus 502 ---~d~~~~~~t~L~~a~~~~~----------l~d~na~d~--------------~G~TPLHlAA~~~~~e~Vv~lLl~- 553 (709)
.+.+..+.||||+|+..+. ..++|.++. .|+||||+|+..++. +++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~ 170 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL-AIVKFLLQN 170 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH-HHHHHHHHC
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH-HHHHHHHhc
Confidence 1233467999999975543 357888887 799999999999765 59999998
Q ss_pred --CCCCCCccccccccCCCCCCHHHHHHHcCC---------HHHHHHHHHHhhhcC
Q 005192 554 --DPGSVGIEAWKSAQDSTGLTPNDYASLRAH---------HSYIHLVQRKINKKS 598 (709)
Q Consensus 554 --~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~---------~~iieLLl~k~~~~~ 598 (709)
.+ +++|.+|.+|+||||+|+..|+ .+++++|++++++..
T Consensus 171 ~~~g------ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 171 SWQP------ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp SSCC------CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCC------CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 54 7889999999999999999998 799999999988765
No 43
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.83 E-value=5.8e-20 Score=184.80 Aligned_cols=148 Identities=15% Similarity=0.030 Sum_probs=121.5
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..||||+|+.+|+.++++.|++..++ ++.. +..|.||||+|++.|+.++|++|+++|++++. .+..+.||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~ 72 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWA--VNII-------TADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTP 72 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC--SSCC-------CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC--CCCc-------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCH
Confidence 46899999999999999999998433 2222 34799999999999999999999999998762 22346899
Q ss_pred hhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 005192 512 LVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~r 581 (709)
||+|+..+. ..+++. +..|.||||+|+..++. +++++|++.+ +++|.+|.+|.||||+|+.+
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~ 144 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHV-ECVNSLIAYG------GNIDHKISHLGTPLYLACEN 144 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCBTTTBCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcH-HHHHHHHHcC------CCCCcCCCCCCCHHHHHHHh
Confidence 999974433 235554 45699999999998765 5999999885 67899999999999999999
Q ss_pred CCHHHHHHHHHHhhhc
Q 005192 582 AHHSYIHLVQRKINKK 597 (709)
Q Consensus 582 G~~~iieLLl~k~~~~ 597 (709)
|+.+++++|+++.++.
T Consensus 145 ~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 145 QQRACVKKLLESGADV 160 (261)
T ss_dssp TCHHHHHHHHHHTCCT
T ss_pred CCHHHHHHHHHcCCCC
Confidence 9999999999987653
No 44
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.82 E-value=7.3e-21 Score=177.02 Aligned_cols=128 Identities=21% Similarity=0.183 Sum_probs=108.4
Q ss_pred hhccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcc
Q 005192 429 FKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 508 (709)
Q Consensus 429 i~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~ 508 (709)
.....++||+|+.+|+.++++.||+..++ ++.. +..|+||||+|+ +|+.+++++||++|++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~--------- 69 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN--PNAP-------NSYGRRPIQVMM-MGSARVAELLLLHGAE--------- 69 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC--TTCC-------CSSSCCTTTSSC-TTCHHHHHHHHTTTCC---------
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC--CCCC-------CCCCCCHHHHHH-cCCHHHHHHHHHcCCC---------
Confidence 34557899999999999999999998433 2222 347999999995 9999999999999986
Q ss_pred hhhhhhhhcccccccCCCCCCCCCh-HHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHH
Q 005192 509 QKQLVDRAGSGFIFKPNVIGPAGLT-PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYI 587 (709)
Q Consensus 509 ~t~L~~a~~~~~l~d~na~d~~G~T-PLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~ii 587 (709)
+|.+|..|+| |||+|+..++. +++++|++.+ +++|.+|..|.||||+|+.+|+.+++
T Consensus 70 ---------------~~~~d~~g~ttpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~v 127 (156)
T 1bi7_B 70 ---------------PNCADPATLTRPVHDAAREGFL-DTLVVLHRAG------ARLDVRDAWGRLPVDLAEELGHRDVA 127 (156)
T ss_dssp ---------------CCCCCTTTCCCHHHHHHHHTCH-HHHHHHHHHT------CCSSCCCTTCCCHHHHHHHHTCHHHH
T ss_pred ---------------CCCcCCCCCcHHHHHHHHCCCH-HHHHHHHHcC------CCCcccCCCCCCHHHHHHHhCHHHHH
Confidence 7889999999 99999999765 4899998875 77899999999999999999999999
Q ss_pred HHHHHHhhhc
Q 005192 588 HLVQRKINKK 597 (709)
Q Consensus 588 eLLl~k~~~~ 597 (709)
++|++++++.
T Consensus 128 ~~Ll~~ga~~ 137 (156)
T 1bi7_B 128 RYLRAAAGGT 137 (156)
T ss_dssp HHHSSCC---
T ss_pred HHHHHcCCCC
Confidence 9999887764
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=8e-20 Score=174.38 Aligned_cols=150 Identities=17% Similarity=0.046 Sum_probs=122.4
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhh
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 512 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L 512 (709)
.++||+|+.+|..+.++.||.. +..+... .+..|.||||+|++.|+.++|++|+++|++++. .+..+.|||
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~---~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l 76 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQD---TTYQVDE-----VDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPY 76 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTC---TTCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHH
T ss_pred ccHHHHHHHhccHHHHHHHHHc---CCCCCCC-----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHH
Confidence 5799999999999999999987 3212211 134799999999999999999999999998762 223468999
Q ss_pred hhhhcccc-----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 005192 513 VDRAGSGF-----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581 (709)
Q Consensus 513 ~~a~~~~~-----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~r 581 (709)
|+|+..+. ..+++.+|..|.||||+|+..++. +++++|++.+ .+++|.+|..|.||||+|+..
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHI-DNVKLLLEDG-----REDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCH-HHHHHHHHHC-----CCCTTCCCTTSCCHHHHHHHS
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCH-HHHHHHHHcC-----CCCcCCCCCCCCCHHHHHHHh
Confidence 99974433 237889999999999999998765 4889898765 256799999999999999999
Q ss_pred CC-----HHHHHHHHHHhhhc
Q 005192 582 AH-----HSYIHLVQRKINKK 597 (709)
Q Consensus 582 G~-----~~iieLLl~k~~~~ 597 (709)
|+ .+++++|+++.++.
T Consensus 151 ~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 151 REGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp SCCSHHHHHHHHHHHHTTCCT
T ss_pred ccchhhHHHHHHHHHHCCCCC
Confidence 88 89999999886653
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=9.1e-20 Score=178.36 Aligned_cols=148 Identities=15% Similarity=0.061 Sum_probs=88.7
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
.++|||+|+..|..++++.|++..++ ++.. +..|.||||+|+.+|+.+++++|+++|++++. .+..+.||
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 80 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGAN--IDTC-------SEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTC 80 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCC--cCcc-------CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcH
Confidence 35677777777777777777766322 1111 22466777777777777777777777665541 12234666
Q ss_pred hhhhhcccc-----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 512 LVDRAGSGF-----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 512 L~~a~~~~~-----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
||+|...+. ..+++.++..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+.
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHV-DLVKLLLSKG------SDINIRDNEENICLHWAAF 153 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCH-HHHHHHHHCC------CCCCccCCCCCCHHHHHHH
Confidence 766653322 135566666677777777666543 3666666653 4556666667777777777
Q ss_pred cCCHHHHHHHHHHhhh
Q 005192 581 RAHHSYIHLVQRKINK 596 (709)
Q Consensus 581 rG~~~iieLLl~k~~~ 596 (709)
+|+.+++++|+++..+
T Consensus 154 ~~~~~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCD 169 (237)
T ss_dssp HCCHHHHHHHHTTTCC
T ss_pred CCCHHHHHHHHHcCCC
Confidence 6777776666665443
No 47
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=4.3e-21 Score=188.83 Aligned_cols=164 Identities=18% Similarity=0.113 Sum_probs=127.0
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCc--cCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcc
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGT--VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 508 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~ga--v~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~ 508 (709)
.+.+|||+|+..|..++++.||+...... ++.. +..|+||||+|+..|+.++|++||++|++++. .+..+
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g 78 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-------NNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRG 78 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCC-------CTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTC
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhcc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCC
Confidence 45789999999999999999999854321 2222 34699999999999999999999999998762 22356
Q ss_pred hhhhhhhhcccc------c----------ccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCC-CC
Q 005192 509 QKQLVDRAGSGF------I----------FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TG 571 (709)
Q Consensus 509 ~t~L~~a~~~~~------l----------~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~-~G 571 (709)
.||||+|+..+. + ..++..+..|.||||+|+..++. +++++|++.+ +++|.+|. .|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------~~~~~~~~~~g 151 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL-GIVELLVSLG------ADVNAQEPCNG 151 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCH-HHHHHHHHHT------CCTTCCCTTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCCCCCCC
Confidence 899999974433 1 12577889999999999999765 4899998875 67899998 99
Q ss_pred CCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeecC
Q 005192 572 LTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 609 (709)
Q Consensus 572 ~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i~ 609 (709)
.||||+|+.+|+.+++++|++++++.. ...|..++.+.
T Consensus 152 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 191 (236)
T 1ikn_D 152 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 191 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHH
Confidence 999999999999999999999876532 12455555544
No 48
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=1.2e-19 Score=177.51 Aligned_cols=149 Identities=17% Similarity=0.045 Sum_probs=124.0
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCcch
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA-PDNVLDKPGSRQ 509 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~g-Ad~~~d~~~~~~ 509 (709)
...+|||+|+.+|+.+++++|++..++ ++.. +..|.||||+|+..|+.+++++|+++| ++++ ..+..+.
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~g~ 112 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGAL--VDPK-------DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN-CQDDGGW 112 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCC--CCCC-------CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTT-CCCTTSC
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCC--CCCC-------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc-cCCCCCC
Confidence 357899999999999999999998433 2222 346899999999999999999999998 5554 2233468
Q ss_pred hhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHH
Q 005192 510 KQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 579 (709)
Q Consensus 510 t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa 579 (709)
||||+|...+. ..+++.++..|.||||+|+..++. +++++|++.+ +++|.+|..|.||||+|+
T Consensus 113 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 113 TPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV-DIAEILLAAK------CDLHAVNIHGDSPLHIAA 185 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH-HHHHHHHTTT------CCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH-HHHHHHHHcC------CCCCCcCCCCCCHHHHHH
Confidence 99999974433 357899999999999999999765 5999999885 678999999999999999
Q ss_pred HcCCHHHHHHHHHHhhh
Q 005192 580 LRAHHSYIHLVQRKINK 596 (709)
Q Consensus 580 ~rG~~~iieLLl~k~~~ 596 (709)
.+|+.+++++|+++.++
T Consensus 186 ~~~~~~~v~~Ll~~gad 202 (237)
T 3b7b_A 186 RENRYDCVVLFLSRDSD 202 (237)
T ss_dssp HTTCHHHHHHHHTTTCC
T ss_pred HhCCHhHHHHHHHcCCC
Confidence 99999999999988665
No 49
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.82 E-value=1.6e-19 Score=178.96 Aligned_cols=159 Identities=16% Similarity=0.023 Sum_probs=126.8
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCch---hhhcCcccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCC
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSS---ELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPG 506 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~---~~~~~G~TpLH~AV~~g~~eIVelLL~~-gAd~~~d~~~ 506 (709)
...+|||+|+.+|+.++++.|++..++.. ....... .....|.||||+|+++|+.+++++|+++ |++++. .+.
T Consensus 104 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~ 180 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALKFLYKRGANVN--LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA-CDN 180 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTT--CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC-CCT
T ss_pred ccCCHHHHHHHhCCHHHHHHHHHhCCCcc--cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc-cCC
Confidence 35789999999999999999999854422 2111100 0134689999999999999999999987 888762 223
Q ss_pred cchhhhhhhhcccc--------------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCC
Q 005192 507 SRQKQLVDRAGSGF--------------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL 572 (709)
Q Consensus 507 ~~~t~L~~a~~~~~--------------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~ 572 (709)
.+.||||+|...+. ..++|.+|..|.||||+|+..++.+ ++++|++.. ++++|.+|..|.
T Consensus 181 ~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~~-----g~~~~~~~~~g~ 254 (285)
T 1wdy_A 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQE-----HIEINDTDSDGK 254 (285)
T ss_dssp TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHH-HHHHHHHSS-----SCCTTCCCTTSC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhcc-----CCCccccCCCCC
Confidence 46899999963322 3578999999999999999987655 889898732 267899999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 573 TPNDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 573 TPLh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
||||+|+.+|+.+++++|++++++..
T Consensus 255 t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 255 TALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 99999999999999999999988765
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.82 E-value=1.1e-20 Score=188.15 Aligned_cols=158 Identities=20% Similarity=0.082 Sum_probs=122.6
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHH---HcCCHHHHHHHHhcCCCCC--------
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAV---RRNCRPMVELLLNYAPDNV-------- 501 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV---~~g~~eIVelLL~~gAd~~-------- 501 (709)
+++||.|+++|..+.++.||+.+.+...+.... ....+..|+||||+|+ +.|+.++|++||++|++.+
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDE-EFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSG-GGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchh-hhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 689999999999998888877543322111110 0001246999999999 7899999999999986421
Q ss_pred --CCCCCcchhhhhhhhcccc----------cccCCCCC--------------CCCChHHHHHHhcCChHHHHHHHhc--
Q 005192 502 --LDKPGSRQKQLVDRAGSGF----------IFKPNVIG--------------PAGLTPLHVAACRDDAENVLDALTD-- 553 (709)
Q Consensus 502 --~d~~~~~~t~L~~a~~~~~----------l~d~na~d--------------~~G~TPLHlAA~~~~~e~Vv~lLl~-- 553 (709)
.+.+..+.||||+|+..+. ..++|.++ ..|+||||+||..++. +++++|++
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~~ 163 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP-HIVHYLTENG 163 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH-HHHHHHHHCS
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCH-HHHHHHHhcc
Confidence 2223367899999975543 35888888 6899999999998765 59999998
Q ss_pred -CCCCCCccccccccCCCCCCHHHHHHHcCC---------HHHHHHHHHHhhhcC
Q 005192 554 -DPGSVGIEAWKSAQDSTGLTPNDYASLRAH---------HSYIHLVQRKINKKS 598 (709)
Q Consensus 554 -~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~---------~~iieLLl~k~~~~~ 598 (709)
.+ +++|.+|..|+||||+|+..|+ .+++++|++++++..
T Consensus 164 ~~g------a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 164 HKQ------ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp SCC------CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccC------CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 54 7889999999999999999888 799999999988764
No 51
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.81 E-value=3.9e-20 Score=180.22 Aligned_cols=129 Identities=9% Similarity=-0.010 Sum_probs=108.3
Q ss_pred ccchHHHHHHhCCCh----HhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCC------HHHHHHHHhcCCCC
Q 005192 431 RFKWLLEFSMEHDWC----AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC------RPMVELLLNYAPDN 500 (709)
Q Consensus 431 R~r~lL~fAve~g~~----aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~------~eIVelLL~~gAd~ 500 (709)
.++||||+|+.+|+. +++++||+..++ ++.. +..|+||||+|+..++ .++|++||++|++
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--vn~~-------d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad- 106 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGAD--IKSR-------TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD- 106 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC--SSCC-------CTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCC--CCCC-------CCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-
Confidence 368899999999975 489999998443 3332 3479999999999987 6889999999986
Q ss_pred CCCCCCcchhhhhhhhcccccccCCCCCCCCC-hHHHHHHhcCC----hHHHHHHHhc-CCCCCCccccccccCCCCCCH
Q 005192 501 VLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGL-TPLHVAACRDD----AENVLDALTD-DPGSVGIEAWKSAQDSTGLTP 574 (709)
Q Consensus 501 ~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~-TPLHlAA~~~~----~e~Vv~lLl~-~p~~vGi~A~vNarD~~G~TP 574 (709)
+|.+|..|+ ||||+|+..+. ..+++++|++ .+ |++|++|..|.||
T Consensus 107 -----------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g------ad~~~~d~~G~Tp 157 (186)
T 3t8k_A 107 -----------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG------LQLLIKDKWGLTA 157 (186)
T ss_dssp -----------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT------CCTTCCCTTSCCH
T ss_pred -----------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC------CCCcccCCCCCCH
Confidence 789999999 99999998543 2358899998 64 7889999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 575 NDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 575 Lh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
||+|+..|+.+++++|...+.+..
T Consensus 158 L~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999998876544
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=4.5e-20 Score=193.33 Aligned_cols=154 Identities=18% Similarity=0.026 Sum_probs=104.1
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhc----CCCCCC---
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY----APDNVL--- 502 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~----gAd~~~--- 502 (709)
....+|||+|+.+|+.+++++||+..++ .. ...|.||||+|+..|+.++|++|+++ |++.+.
T Consensus 51 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 119 (364)
T 3ljn_A 51 RFGCTALHLACKFGCVDTAKYLASVGEV----HS-------LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLN 119 (364)
T ss_dssp TTCCCHHHHHHHHCCHHHHHHHHHHCCC----CC-------CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCC----cc-------ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHh
Confidence 3456777777777777777777776221 11 12567777777777777777777777 544321
Q ss_pred --C-----------CCCcchhhhhhhhccc--c----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCC
Q 005192 503 --D-----------KPGSRQKQLVDRAGSG--F----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGS 557 (709)
Q Consensus 503 --d-----------~~~~~~t~L~~a~~~~--~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~ 557 (709)
+ .+..+.||||+|+..+ . ..++|.+|..|+||||+|+..++. +++++|++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 120 ECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNR-EALDLMMDTVPS 198 (364)
T ss_dssp CCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHCSC
T ss_pred hcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCH-HHHHHHHhcccc
Confidence 0 2224678888887655 3 347888888888888888887654 478888765411
Q ss_pred CCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 558 VGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 558 vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
. -..++|.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 199 ~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad 236 (364)
T 3ljn_A 199 K-SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID 236 (364)
T ss_dssp S-SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC
T ss_pred c-ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 0 0123788888888888888888888888888887655
No 53
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.81 E-value=1e-19 Score=193.46 Aligned_cols=153 Identities=16% Similarity=0.073 Sum_probs=125.3
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCC-ccCCCCCCchhhhcCcccHHHHHHHcC---CHHHHHHHHhcCCCCCCC---
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDG-TVDTGDHTSSELAILEMGLLHKAVRRN---CRPMVELLLNYAPDNVLD--- 503 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~g-av~~~~~s~~~~~~~G~TpLH~AV~~g---~~eIVelLL~~gAd~~~d--- 503 (709)
...+|||+|+.+|+.+++++||+....+ .++.. +..|.||||+|+..+ +.+++++|+++|++++..
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 270 (373)
T 2fo1_E 198 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL-------DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270 (373)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC-------CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhc-------CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc
Confidence 4578999999999999999999874110 12221 347999999999998 899999999999987631
Q ss_pred ----CCCcchhhhhhhhcccc-----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccC
Q 005192 504 ----KPGSRQKQLVDRAGSGF-----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD 568 (709)
Q Consensus 504 ----~~~~~~t~L~~a~~~~~-----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD 568 (709)
.+..+.||||+|+..+. ..++|.+|..|+||||+||..++. +++++|++.+ |++|.+|
T Consensus 271 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~g------ad~~~~d 343 (373)
T 2fo1_E 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI-EVVMYLIQQG------ASVEAVD 343 (373)
T ss_dssp GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH-HHHHHHHHTT------CCSSCCC
T ss_pred ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCccCCC
Confidence 23457899999975543 268899999999999999999765 5999999885 7789999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 569 STGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 569 ~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
..|.||||+|+.+||.+++++|+++..++
T Consensus 344 ~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 344 ATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999999999999999999999886654
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=1.7e-19 Score=193.11 Aligned_cols=149 Identities=21% Similarity=0.202 Sum_probs=118.9
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..+|||+|+.+|+.++++.|++...+ ++.. +..|.||||+|+..|+.++|++|+++|++.+. .+..+.||
T Consensus 212 g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~ 281 (437)
T 1n11_A 212 GYTPLHIAAKQNQVEVARSLLQYGGS--ANAE-------SVQGVTPLHLAAQEGHAEMVALLLSKQANGNL-GNKSGLTP 281 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC--CCCC-------CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC-CCCCCCCH
Confidence 46799999999999999999987332 2221 33688999999999999999999999987652 22346899
Q ss_pred hhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 005192 512 LVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~r 581 (709)
||+|+..+. ..++|.+|..|+||||+|+..++.+ ++++|++.+ +++|.+|..|.||||+|+.+
T Consensus 282 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~g------ad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 282 LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK-LVKFLLQHQ------ADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSH-HHHHHHHTT------CCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHH-HHHHHHhcC------CCCCCCCCCCCCHHHHHHHC
Confidence 999865443 3478889999999999999987655 888888875 67789999999999999999
Q ss_pred CCHHHHHHHHHHhhhc
Q 005192 582 AHHSYIHLVQRKINKK 597 (709)
Q Consensus 582 G~~~iieLLl~k~~~~ 597 (709)
|+.+++++|++++++.
T Consensus 355 g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 355 GHTDIVTLLLKNGASP 370 (437)
T ss_dssp TCHHHHHHHHHTTCCS
T ss_pred ChHHHHHHHHHCcCCC
Confidence 9999999999887653
No 55
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=174.64 Aligned_cols=150 Identities=19% Similarity=0.085 Sum_probs=119.1
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..+|||+|+.+|+.++++.|++..++. +.. +..|.||||+|+.+|+.+++++|+++|++++. .+..+.||
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~-------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~g~t~ 145 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADP--SLI-------DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM-MDQNGMTP 145 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCT--TCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCH
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCC--ccc-------CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc-cCCCCCcH
Confidence 468999999999999999999983332 211 34688999999999999999999999988762 22346899
Q ss_pred hhhhhcccc-----------cccCCCCCC-CCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHH
Q 005192 512 LVDRAGSGF-----------IFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 579 (709)
Q Consensus 512 L~~a~~~~~-----------l~d~na~d~-~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa 579 (709)
||+|+..+. ..++|..+. .|.||||+|+..++.+ ++++|++.+ ++++.+|..|.||||+|+
T Consensus 146 l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 146 LMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT-VISLLLEAG------ANVDAQNIKGESALDLAK 218 (240)
T ss_dssp HHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH-HHHHHHHHT------CCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH-HHHHHHHcC------CCCCCcCCCCCCHHHHHH
Confidence 999963322 247788886 8999999999987654 889898875 677999999999999999
Q ss_pred HcCCHHHHHHHHHHhhhcC
Q 005192 580 LRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 580 ~rG~~~iieLLl~k~~~~~ 598 (709)
.+|+.+++++|+++..++.
T Consensus 219 ~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 219 QRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp HTTCHHHHHHHHHHC----
T ss_pred HcCcHHHHHHHHHhhhccC
Confidence 9999999999998877654
No 56
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.81 E-value=1.3e-20 Score=171.02 Aligned_cols=125 Identities=26% Similarity=0.214 Sum_probs=105.2
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
....+|||+|+.+|+.++++.||+..++ ++.. +..|+||||+|+..|+.+++++|+++|++
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------- 68 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSD--PNVK-------DHAGWTPLHEACNHGHLKVVELLLQHKAL---------- 68 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCC--SCCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCc----------
Confidence 4568899999999999999999998433 2222 34799999999999999999999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 589 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieL 589 (709)
+|.+|..|.||||+|+..++. +++++|++.+ ++++.+|..|.||||+|+..++.+++++
T Consensus 69 --------------~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 69 --------------VNTTGYQNDSPLHDAAKNGHV-DIVKLLLSYG------ASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp --------------TTCCCGGGCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred --------------ccCcCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 688999999999999998765 5999999875 6789999999999999999998888887
Q ss_pred HHHHh
Q 005192 590 VQRKI 594 (709)
Q Consensus 590 Ll~k~ 594 (709)
|.+..
T Consensus 128 l~~~~ 132 (137)
T 3c5r_A 128 PEKNE 132 (137)
T ss_dssp C----
T ss_pred ccccc
Confidence 76553
No 57
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.81 E-value=4.9e-20 Score=164.53 Aligned_cols=116 Identities=20% Similarity=0.129 Sum_probs=97.7
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..++||+|+.+|+.++++.|++...+ ++.. +..|+||||+|+..|+.+++++|+++|++
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 65 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGED--VNRT-------LEGGRKPLHYAADCGQLEILEFLLLKGAD------------ 65 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC--TTSC-------CTTSSCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCC--cCcc-------CCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 46899999999999999999998433 2222 34699999999999999999999999986
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 590 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLL 590 (709)
+|.+|..|+||||+|+..++. +++++|++.+ ++++.+|.+|.||||+|.. .++.++|
T Consensus 66 ------------~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~---~~~~~ll 122 (123)
T 3aaa_C 66 ------------INAPDKHHITPLLSAVYEGHV-SCVKLLLSKG------ADKTVKGPDGLTAFEATDN---QAIKALL 122 (123)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHCCC---HHHHHHH
T ss_pred ------------CCcCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCCCHHHHhCC---HHHHHHh
Confidence 788999999999999998765 5899999885 6789999999999999954 4444444
No 58
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=184.33 Aligned_cols=148 Identities=16% Similarity=0.035 Sum_probs=121.3
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...||||+|+.+|..++++.||+..++ ++.. +..|+||||+|+..|+.++|++|+++|++++. .+..+.|
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t 127 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLISQGWA--VNII-------TADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHT 127 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHHHTTCC--SCEE-------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCC
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCc-------CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCC
Confidence 357899999999999999999998433 2221 34799999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..+++.. ..|.||||+|+..++.+ ++++|++.+ ++++.+|..|.||||+|+.
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~-~v~~Ll~~g------~~~~~~d~~g~t~L~~A~~ 199 (285)
T 3d9h_A 128 PLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVE-CVNSLIAYG------GNIDHKISHLGTPLYLACE 199 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCBTTTBCHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCCHH-HHHHHHHCC------CCCCCcCCCCCCHHHHHHH
Confidence 9999974433 2355544 45999999999997655 899999875 6779999999999999999
Q ss_pred cCCHHHHHHHHHHhhh
Q 005192 581 RAHHSYIHLVQRKINK 596 (709)
Q Consensus 581 rG~~~iieLLl~k~~~ 596 (709)
+|+.+++++|+++.++
T Consensus 200 ~~~~~~v~~Ll~~ga~ 215 (285)
T 3d9h_A 200 NQQRACVKKLLESGAD 215 (285)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCcHHHHHHHHHCCCC
Confidence 9999999999987654
No 59
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.1e-19 Score=155.12 Aligned_cols=93 Identities=30% Similarity=0.309 Sum_probs=83.6
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHh
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 552 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl 552 (709)
+|+||||+|++.|+.+++++|+++|++ +|.+|..|+||||+|+..++. +++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll 55 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHL-EVVKLLL 55 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCH-HHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHcCCH-HHHHHHH
Confidence 378999999999999999999999986 788999999999999998765 5899999
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 553 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 553 ~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+.+ +++|.+|.+|+||||+|+.+|+.+++++|++++++
T Consensus 56 ~~g------a~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 56 EAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 885 77899999999999999999999999999987653
No 60
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=2.5e-19 Score=184.77 Aligned_cols=140 Identities=19% Similarity=0.127 Sum_probs=116.6
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~---g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
-.+|+.|++.|....++.|+...++...... .. ..+..|+||||+|+.. |+.++|++||++|++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~-l~--~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---------- 197 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIP-LA--NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---------- 197 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCC-CS--SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC----------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhcc-cc--ccccCCCCcchHHHHhcccchHHHHHHHHHCCCC----------
Confidence 3589999999999999999998544220000 00 0134699999999999 999999999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 589 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieL 589 (709)
+|.+|..|+||||+||..++. +++++|++.+ |++|++|.+|.||||+|+.+|+.+++++
T Consensus 198 --------------in~~d~~g~TpLh~A~~~g~~-~~v~~Ll~~g------ad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 198 --------------LDKQTGKGSTALHYCCLTDNA-ECLKLLLRGK------ASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp --------------TTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------ccccCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 788999999999999998765 5999999885 7889999999999999999999999999
Q ss_pred HHHHhhhcCCCCCeeEeec
Q 005192 590 VQRKINKKSSESGRVILDI 608 (709)
Q Consensus 590 Ll~k~~~~~~~~~~v~~~i 608 (709)
|+++++++. +.|+.+..
T Consensus 257 Ll~~ga~~~--~~~~~v~~ 273 (278)
T 1dcq_A 257 LTQALSGRF--NSHVHVEY 273 (278)
T ss_dssp HHHHHTTCC--CSSCCCCC
T ss_pred HHHcCCCCC--Ccceeeec
Confidence 999999877 66665544
No 61
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.80 E-value=5.1e-19 Score=183.42 Aligned_cols=152 Identities=21% Similarity=0.150 Sum_probs=115.5
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..++||.|+++|+.++|++||+..++ ++..+ ...|+||||+|+++|+.+||++||++|++.+.. ...+.++
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gad--vn~~~------~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~-~~~~~~~ 95 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGAN--VNFQE------EEGGWTPLHNAVQMSREDIVELLLRHGADPVLR-KKNGATP 95 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCC--TTCCC------TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCC--CCccC------CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhh-ccCCCch
Confidence 46899999999999999999998443 33221 235899999999999999999999999987622 2335677
Q ss_pred hhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCc----cccccccCCCCCCHHHH
Q 005192 512 LVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI----EAWKSAQDSTGLTPNDY 577 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi----~A~vNarD~~G~TPLh~ 577 (709)
++.+..... ..++|.+|..|+||||+|+..++.+ ++++|+..+..+.+ ..+.+..|..|.||||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~-~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~ 174 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK-ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 174 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHH-HHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHH
T ss_pred hHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHH-HHHHHHHcCCCcchhhccccccccccCCCCcHHHH
Confidence 777742221 3578999999999999999987654 88888877532211 11123456779999999
Q ss_pred HHHcCCHHHHHHHHHH
Q 005192 578 ASLRAHHSYIHLVQRK 593 (709)
Q Consensus 578 Aa~rG~~~iieLLl~k 593 (709)
|+.+|+.+++++|+.+
T Consensus 175 A~~~g~~~~v~~LL~~ 190 (337)
T 4g8k_A 175 AAEKGHVEVLKILLDE 190 (337)
T ss_dssp HHHHTCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhc
Confidence 9999999999999865
No 62
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=6.6e-19 Score=180.24 Aligned_cols=151 Identities=21% Similarity=0.132 Sum_probs=121.3
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
....||||+|+.+|+.+++++||+..++ ++.. +..|+||||+|+..|+.++|++|+++|++++. .+..+.
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~~~~g~ 125 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHGAD--VHAK-------DKGGLVPLHNACSYGHYEVTELLLKHGACVNA-MDLWQF 125 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCC-------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcc-------CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCC
Confidence 3457899999999999999999998433 2222 34799999999999999999999999998762 223468
Q ss_pred hhhhhhhcccc----------cccCCCC----------------------------------------------------
Q 005192 510 KQLVDRAGSGF----------IFKPNVI---------------------------------------------------- 527 (709)
Q Consensus 510 t~L~~a~~~~~----------l~d~na~---------------------------------------------------- 527 (709)
||||+|+..+. ..+++.+
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 205 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccc
Confidence 99999974433 2344433
Q ss_pred --CCCCChHHHHHHhcC--ChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 528 --GPAGLTPLHVAACRD--DAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 528 --d~~G~TPLHlAA~~~--~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+..|.||||+|+..+ +..+++++|++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++.++
T Consensus 206 ~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 272 (351)
T 3utm_A 206 KQPQSHETALHCAVASLHPKRKQVAELLLRKG------ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK 272 (351)
T ss_dssp CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC------CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 456789999999874 2356899998885 67899999999999999999999999999988655
No 63
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.80 E-value=5.6e-19 Score=175.13 Aligned_cols=147 Identities=17% Similarity=0.100 Sum_probs=119.7
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCC------
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK------ 504 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~------ 504 (709)
...+|||+|+..|+.+++++|++..++ ++.. +..|+||||+|+++|+.+++++|+++|++.+...
T Consensus 71 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~ 141 (285)
T 1wdy_A 71 NGATPFLLAAIAGSVKLLKLFLSKGAD--VNEC-------DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ 141 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCC--TTCB-------CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcc-------CcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHH
Confidence 357899999999999999999998333 2211 3468999999999999999999999999876321
Q ss_pred ---CCcchhhhhhhhcccc-----------cccCCCCCCCCChHHHHHHhcCCh---HHHHHHHhcCCCCCCcccccccc
Q 005192 505 ---PGSRQKQLVDRAGSGF-----------IFKPNVIGPAGLTPLHVAACRDDA---ENVLDALTDDPGSVGIEAWKSAQ 567 (709)
Q Consensus 505 ---~~~~~t~L~~a~~~~~-----------l~d~na~d~~G~TPLHlAA~~~~~---e~Vv~lLl~~p~~vGi~A~vNar 567 (709)
...+.||||+|...+. ..++|.+|..|+||||+|+..++. .+++++|++.+ +++|.+
T Consensus 142 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g------~~~~~~ 215 (285)
T 1wdy_A 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG------ADVNVR 215 (285)
T ss_dssp HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT------CCSSCC
T ss_pred HhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC------CCCCCc
Confidence 3446799999964432 457889999999999999998652 55888888875 677999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH
Q 005192 568 DSTGLTPNDYASLRAHHSYIHLVQR 592 (709)
Q Consensus 568 D~~G~TPLh~Aa~rG~~~iieLLl~ 592 (709)
|..|.||||+|+.+|+.+++++|++
T Consensus 216 ~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 216 GERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999999999999987
No 64
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.80 E-value=7.2e-20 Score=187.68 Aligned_cols=150 Identities=13% Similarity=-0.008 Sum_probs=117.8
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcc-hh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR-QK 510 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~-~t 510 (709)
..+|||+|+.+|+.+++++||+..++ ++.. +..|+||||+|+..|+.++|++|+++|++++... ..+ .|
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~-------d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~~t 131 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLD--DSQF-------DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG-KTGWKT 131 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCS-SSGGGS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC--CCCc-------CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccC-CCCCCC
Confidence 57899999999999999999998433 2222 3468999999999999999999999998876222 234 69
Q ss_pred hhhhhhcccc------cc--cCCCCCC-CCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCH-HHHHHH
Q 005192 511 QLVDRAGSGF------IF--KPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP-NDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~------l~--d~na~d~-~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TP-Lh~Aa~ 580 (709)
|||+|+..+. +. ..+..+. .|.||||+|+..++. +++++|++.+ +++|.+|..|+|| ||+|+.
T Consensus 132 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g------ad~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 132 SFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHV-DMMILLLDYM------TSTNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCH-HHHHHHHHHH------HHTCTTCCCBCCTTHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChH-HHHHHHHHcC------CCCCcccCCCCChHHHHHHH
Confidence 9999975543 11 2233444 899999999998765 4889898774 7789999999998 999999
Q ss_pred cCCHHHHHHHHHHhhhcC
Q 005192 581 RAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 581 rG~~~iieLLl~k~~~~~ 598 (709)
+|+.+++++|++++++..
T Consensus 205 ~~~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 205 NKDIEMLQALFKYDINIY 222 (285)
T ss_dssp HTCHHHHHHHTTSCBCST
T ss_pred cCCHHHHHHHHHcCCCCC
Confidence 999999999998877755
No 65
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.79 E-value=2.2e-19 Score=171.58 Aligned_cols=113 Identities=22% Similarity=0.108 Sum_probs=96.1
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
..+.+|||+|+.+|+.++++.||+ .. .++.. +..|+||||+|+..|+.++|++|+++|++
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~-------d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---------- 101 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DR--DVDAV-------DENGRTALLFVAGLGSDKCVRLLAEAGAD---------- 101 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TS--CTTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cC--CCCCc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------
Confidence 456789999999999999999998 32 23332 34799999999999999999999999986
Q ss_pred hhhhhhhcccccccCCCCC-CCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 005192 510 KQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 583 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d-~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~ 583 (709)
+|.++ ..|+||||+|+..++. +++++|++.+ +++|.+|.+|.||||+|+..++
T Consensus 102 --------------~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 102 --------------LDHRDMRGGLTALHMAAGYVRP-EVVEALVELG------ADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp --------------TTCCCSSSSCCHHHHHHHTTCH-HHHHHHHHHT------CCTTCCCTTSCCHHHHHHHHHH
T ss_pred --------------CCcCCCCCCCCHHHHHHhcCcH-HHHHHHHHcC------CCCcCCCCCCCCHHHHHHHhcc
Confidence 67777 8899999999998765 5899998875 6789999999999999987643
No 66
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.79 E-value=8.1e-19 Score=170.02 Aligned_cols=152 Identities=22% Similarity=0.124 Sum_probs=124.7
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.++++.|++...+. +.. ....|.||||+|+..|+.+++++|+++|++.+. .+..+.|
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~------~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t 111 (240)
T 3eu9_A 41 ENVTLLHWAAINNRIDLVKYYISKGAIV--DQL------GGDLNSTPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCS 111 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCC------BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCcc--hhh------cCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCC
Confidence 3578999999999999999999984331 111 023588999999999999999999999998762 2234689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCC-CCCCHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYAS 579 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~-~G~TPLh~Aa 579 (709)
|||+|...+. ..+++.++..|.||||+|+..++..+++++|+..+ ++++.+|. .|.||||+|+
T Consensus 112 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~------~~~~~~~~~~g~t~L~~A~ 185 (240)
T 3eu9_A 112 CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN------VSVNLGDKYHKNTALHWAV 185 (240)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT------CCTTCCCTTTCCCHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC------CCcchhhccCCCcHHHHHH
Confidence 9999975433 35789999999999999997777666889898875 66788887 9999999999
Q ss_pred HcCCHHHHHHHHHHhhhc
Q 005192 580 LRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 580 ~rG~~~iieLLl~k~~~~ 597 (709)
.+|+.+++++|+++.++.
T Consensus 186 ~~~~~~~v~~Ll~~g~~~ 203 (240)
T 3eu9_A 186 LAGNTTVISLLLEAGANV 203 (240)
T ss_dssp HHTCHHHHHHHHHHTCCT
T ss_pred HcCCHHHHHHHHHcCCCC
Confidence 999999999999886653
No 67
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=8.8e-19 Score=187.62 Aligned_cols=147 Identities=18% Similarity=0.146 Sum_probs=124.2
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.+++++|++..++. +.. +..|.||||+|++.|+.+++++|+++|++++. .+..+.|
T Consensus 244 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~-------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t 313 (437)
T 1n11_A 244 QGVTPLHLAAQEGHAEMVALLLSKQANG--NLG-------NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYT 313 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCT--TCC-------CTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCCCC--CCC-------CCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC-CCCCCCC
Confidence 3578999999999999999999984332 222 34699999999999999999999999998762 2334689
Q ss_pred hhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
|||+|+..+. ..++|.+|..|+||||+|+..++. +++++|++.+ |+++.+|.+|.||||+|+.
T Consensus 314 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~g------a~~~~~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 314 PLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT-DIVTLLLKNG------ASPNEVSSDGTTPLAIAKR 386 (437)
T ss_dssp HHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT------CCSCCCCSSSCCHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChH-HHHHHHHHCc------CCCCCCCCCCCCHHHHHHH
Confidence 9999975543 358999999999999999998765 5999999885 7789999999999999999
Q ss_pred cCCHHHHHHHHHHh
Q 005192 581 RAHHSYIHLVQRKI 594 (709)
Q Consensus 581 rG~~~iieLLl~k~ 594 (709)
+|+.+++++|....
T Consensus 387 ~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 387 LGYISVTDVLKVVT 400 (437)
T ss_dssp TTCHHHHHHHHHHC
T ss_pred cCcHHHHHHHHhcc
Confidence 99999999987653
No 68
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.79 E-value=3.3e-19 Score=189.48 Aligned_cols=151 Identities=19% Similarity=0.067 Sum_probs=122.1
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCCc
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA---PDNVLDKPGS 507 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~g---Ad~~~d~~~~ 507 (709)
...||||+|+.+|+.+++++||+..++ ++.. +..|.||||+|+..|+.+++++|++++ ++++ ..+..
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~--~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~ 234 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGAD--PTIY-------NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-ELDRN 234 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC--SCCC-------CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-CCCTT
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCC--Cccc-------CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-hcCCC
Confidence 457899999999999999999998433 2222 347899999999999999999999987 5654 22334
Q ss_pred chhhhhhhhccc---c----------cccCCC--------CCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccc
Q 005192 508 RQKQLVDRAGSG---F----------IFKPNV--------IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSA 566 (709)
Q Consensus 508 ~~t~L~~a~~~~---~----------l~d~na--------~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNa 566 (709)
+.||||+|+..+ . ..++|. +|..|+||||+||..++.+ ++++|++.+ ++++|.
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-~v~~Ll~~~-----~~~~n~ 308 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP-IVKYLVGEK-----GSNKDK 308 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHH-HHHHHHHHS-----CCCTTC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHH-HHHHHHHhc-----CCCccC
Confidence 689999997543 1 235554 6779999999999997655 889998654 267899
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 567 QDSTGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 567 rD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
+|.+|.||||+|+.+|+.+++++|++++++.
T Consensus 309 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 9999999999999999999999999886653
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.79 E-value=2.4e-19 Score=179.14 Aligned_cols=126 Identities=21% Similarity=0.119 Sum_probs=109.9
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..++||+|+..|..++++.||+..++ ++.. +..|+||||+|+..|+.++|++||++|++
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------ 79 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMND--PSQP-------NEEGITALHNAICGANYSIVDFLITAGAN------------ 79 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------
Confidence 35799999999999999999998433 2222 34799999999999999999999999986
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccC-CCCCCHHHHH--HHcCCHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA--SLRAHHSYIH 588 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD-~~G~TPLh~A--a~rG~~~iie 588 (709)
+|.+|..|+||||+|+..++. +++++|++.+ ++++.+| .+|+||||+| +..|+.++++
T Consensus 80 ------------~n~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~g------a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 80 ------------VNSPDSHGWTPLHCAASCNDT-VICMALVQHG------AAIFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCH-HHHHHHHTTT------CCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 788999999999999998765 5999999875 6778887 5999999999 9999999999
Q ss_pred HHHHHhhhc
Q 005192 589 LVQRKINKK 597 (709)
Q Consensus 589 LLl~k~~~~ 597 (709)
+|+++.++.
T Consensus 141 ~Ll~~ga~~ 149 (229)
T 2vge_A 141 YLADVEQSM 149 (229)
T ss_dssp HHHHHHHHT
T ss_pred HHHHcCCCc
Confidence 999987764
No 70
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=1.2e-19 Score=177.49 Aligned_cols=127 Identities=18% Similarity=0.091 Sum_probs=102.9
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCcchh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQK 510 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~-gAd~~~d~~~~~~t 510 (709)
..++||+|+.+|+.++++.||+..++ ++.. +..|+||||+|+..|+.++|++||++ |++
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~----------- 132 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVG--VNGL-------DKAGSTALYWACHGGHKDIVEMLFTQPNIE----------- 132 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-----------
T ss_pred cccccccccccCcHHHHHHHHhCCCC--cccc-------CCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-----------
Confidence 46899999999999999999997433 2222 34799999999999999999999998 775
Q ss_pred hhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 005192 511 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 590 (709)
Q Consensus 511 ~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLL 590 (709)
+|.+|..|+||||+|+..++. +++++|++.+ |+++.+|.+|.||||+|+..|+.+++++|
T Consensus 133 -------------~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 133 -------------LNQQNKLGDTALHAAAWKGYA-DIVQLLLAKG------ARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp -------------CCCCCTTSCCHHHHHHHHTCH-HHHHHHHHHT------CCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred -------------ccccCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 788999999999999999765 5999999875 77899999999999999999999999998
Q ss_pred HHHhhhcC
Q 005192 591 QRKINKKS 598 (709)
Q Consensus 591 l~k~~~~~ 598 (709)
+.+.+.+.
T Consensus 193 ~~~~~~~~ 200 (222)
T 3ehr_A 193 QGTDAVRT 200 (222)
T ss_dssp --------
T ss_pred hccchhhh
Confidence 88766544
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=3e-19 Score=177.95 Aligned_cols=127 Identities=20% Similarity=0.148 Sum_probs=108.9
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..++||+|+.+|+.++++.||+..++ ++.. +..|+||||+|+..|+.++|++||++|++
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~-------d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------ 95 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEVDD--PSLP-------NDEGITALHNAVCAGHTEIVKFLVQFGVN------------ 95 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTTSS--CCCC-------CTTSCCHHHHHHHHTCHHHHHHHHHHTCC------------
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcCCC--CCCc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 46899999999999999999988432 2222 34689999999999999999999999986
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCC-CHHHHH--HHcCCHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYA--SLRAHHSYIH 588 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~-TPLh~A--a~rG~~~iie 588 (709)
+|.+|..|+||||+||..++. +++++|++++ +++|.+|..|. ||||+| +.+|+.++++
T Consensus 96 ------------~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~g------a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 96 ------------VNAADSDGWTPLHCAASCNNV-QVCKFLVESG------AAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred ------------CCccCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 788999999999999998765 5999999885 77899998887 999999 7899999999
Q ss_pred HHHHHhhhcC
Q 005192 589 LVQRKINKKS 598 (709)
Q Consensus 589 LLl~k~~~~~ 598 (709)
+|+.+.++..
T Consensus 157 ~Ll~~~a~~~ 166 (239)
T 1ycs_B 157 FLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHhhhccc
Confidence 9999887744
No 72
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.78 E-value=1.6e-19 Score=188.83 Aligned_cols=164 Identities=15% Similarity=-0.023 Sum_probs=119.3
Q ss_pred HHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhh
Q 005192 435 LLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVD 514 (709)
Q Consensus 435 lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~ 514 (709)
.+|+|+..+..+++++|++..++ ++.. .+..|+||||+|+..|+.++|++||++|++++ ..+..+.||||+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~d--vn~~------~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~ 170 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLN--LNIP------VDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVK 170 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCC--SCSC------CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCC--cccc------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHH
Confidence 56788888888888888887333 3320 13479999999999999999999999999987 222346899999
Q ss_pred hhcccc--------------cccCCCCCCCCChHHHHHHh----cCChHHHHHHHhcCCCCC----------------Cc
Q 005192 515 RAGSGF--------------IFKPNVIGPAGLTPLHVAAC----RDDAENVLDALTDDPGSV----------------GI 560 (709)
Q Consensus 515 a~~~~~--------------l~d~na~d~~G~TPLHlAA~----~~~~e~Vv~lLl~~p~~v----------------Gi 560 (709)
|+..+. ..++|.+|..|+||||+|+. .++ .+++++|++.+... |+
T Consensus 171 A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~-~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 171 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC-SAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp HHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTC-HHHHHHHHHHHHHHHHHGGGCCEEEC------
T ss_pred HHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccccc-HHHHHHHHHHHHHHHhcccchHHHhhhhcccC
Confidence 976432 24789999999999999998 655 45888886531000 00
Q ss_pred -----------------------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeec
Q 005192 561 -----------------------EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDI 608 (709)
Q Consensus 561 -----------------------~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i 608 (709)
+.++|.+|.+|+||||+|+.+|+.+++++|++++++.. ..+|.+++.+
T Consensus 250 ~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 322 (327)
T 1sw6_A 250 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF 322 (327)
T ss_dssp ----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred CcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 00478999999999999999999999999999877632 1244554444
No 73
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.78 E-value=8.2e-19 Score=168.62 Aligned_cols=114 Identities=25% Similarity=0.223 Sum_probs=98.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChH
Q 005192 476 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAE 545 (709)
Q Consensus 476 TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e 545 (709)
+.|+.||++|+.++|++||++|+|+|. .+..++||||++...+. ..++|.+|..|+||||+||..++.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~- 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA-SDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK- 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCH-
Confidence 579999999999999999999999872 22346899999974433 358999999999999999998765
Q ss_pred HHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 546 NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 546 ~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
+++++|++.+ |++|.+|.+|+||||+|+.+|+.+++++|+++.++.
T Consensus 84 ~~v~~Ll~~g------advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 84 EVVKLLISKG------ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHCc------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 5999999885 788999999999999999999999999999886653
No 74
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=5.8e-19 Score=177.23 Aligned_cols=126 Identities=21% Similarity=0.139 Sum_probs=107.6
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
..+.+|||+|+.+|+.++++.||+ ..+ ++.. +..|+||||+|+.+|+.++|++||++|++
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~--~~~~-------d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---------- 102 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD--VDAV-------DENGRTALLFVAGLGSDKCVRLLAEAGAD---------- 102 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC--TTCB-------CTTSCBHHHHHHHHTCHHHHHHHHHTTCC----------
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC--CCCc-------CCCCCCHHHHHHHCCCHHHHHHHHHcCCC----------
Confidence 456789999999999999999998 322 3322 34699999999999999999999999986
Q ss_pred hhhhhhhcccccccCCCCC-CCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHH---------
Q 005192 510 KQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS--------- 579 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d-~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa--------- 579 (709)
+|.++ ..|+||||+|+..++. +++++|++.+ +++|.+|..|.||||+|+
T Consensus 103 --------------~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g------a~~~~~d~~g~t~l~~A~~~~~~~~~~ 161 (244)
T 3ui2_A 103 --------------LDHRDMRGGLTALHMAAGYVRP-EVVEALVELG------ADIEVEDERGLTALELAREILKTTPKG 161 (244)
T ss_dssp --------------TTCCCSSSCCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTCCCHHHHHHHHHTTCCCS
T ss_pred --------------CCcCCCCCCCCHHHHHHHcCCH-HHHHHHHHCC------CCCCCCCCCCCcHHHHHHHHHhccCCC
Confidence 67777 7899999999998765 5999999885 778999999999999988
Q ss_pred -------HcCCHHHHHHHHHHhhh
Q 005192 580 -------LRAHHSYIHLVQRKINK 596 (709)
Q Consensus 580 -------~rG~~~iieLLl~k~~~ 596 (709)
..|+.+++++|+.+..+
T Consensus 162 ~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 162 NPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHcChHHHHHHHHHhccc
Confidence 67899999999987554
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=2.5e-19 Score=178.57 Aligned_cols=125 Identities=18% Similarity=0.144 Sum_probs=85.5
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
+.+|||.|+..|..++++.||+..++ ++. ...|.||||.|+..|+.++|++||++|++
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~--~~~--------~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------ 62 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMR--VKF--------NPLPLALLLDSSLEGEFDLVQRIIYEVDD------------ 62 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS------------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCC--ccc--------CchhhHHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 47899999999999999999998433 221 23588999999999999999999999985
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 591 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl 591 (709)
+|.+|..|+||||+||..++. +++++|++.+ +++|.+|.+|+||||+|+.+|+.+++++|+
T Consensus 63 ------------~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g------a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 63 ------------PSLPNDEGITALHNAVCAGHT-EIVKFLVQFG------VNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp ------------CCCCCTTSCCHHHHHHHHTCH-HHHHHHHHHT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 788999999999999999765 4899999875 778999999999999999999999999999
Q ss_pred HHhhhc
Q 005192 592 RKINKK 597 (709)
Q Consensus 592 ~k~~~~ 597 (709)
++.++.
T Consensus 124 ~~ga~~ 129 (239)
T 1ycs_B 124 ESGAAV 129 (239)
T ss_dssp HTTCCT
T ss_pred HcCCCc
Confidence 987764
No 76
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.78 E-value=3.7e-19 Score=181.83 Aligned_cols=149 Identities=18% Similarity=0.086 Sum_probs=120.6
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCcchhh
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDKPGSRQKQ 511 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gA-d~~~d~~~~~~t~ 511 (709)
++++|.|+.+|..+.++.|++.+.+..++.. +..|+||||+|++.|+.++|++||++|+ +++ ..+..+.||
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~-------d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~g~tp 148 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIA-------DSNGNTALHYSVSHANFPVVQQLLDSGVCKVD-KQNRAGYSP 148 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTT-CCCTTSCCH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCC-------CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCC-CCCCCCCCH
Confidence 4477888999999999999887655334433 3479999999999999999999999998 654 233456899
Q ss_pred hhhhhcccc---------------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHH
Q 005192 512 LVDRAGSGF---------------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 576 (709)
Q Consensus 512 L~~a~~~~~---------------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh 576 (709)
||+++.... ..+++..+..|+||||+||..++. +++++|++.+ +++|.+|.+|+||||
T Consensus 149 L~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~-~~v~~Ll~~g------ad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 149 IMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRV-DVVKALLACE------ADVNVQDDDGSTALM 221 (276)
T ss_dssp HHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCTTCCCTTSCCHHH
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHhCC------CCCCCCCCCCCCHHH
Confidence 999973211 235677889999999999999765 5999999885 778999999999999
Q ss_pred HHHHcCCHHHHHHHHH-Hhhh
Q 005192 577 YASLRAHHSYIHLVQR-KINK 596 (709)
Q Consensus 577 ~Aa~rG~~~iieLLl~-k~~~ 596 (709)
+|+.+|+.+++++|++ +.++
T Consensus 222 ~A~~~g~~~iv~~Ll~~~gad 242 (276)
T 4hbd_A 222 CACEHGHKEIAGLLLAVPSCD 242 (276)
T ss_dssp HHHHHTCHHHHHHHHTSTTCC
T ss_pred HHHHCCCHHHHHHHHhcCCCC
Confidence 9999999999999997 4443
No 77
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=5.3e-19 Score=181.24 Aligned_cols=147 Identities=16% Similarity=0.085 Sum_probs=121.1
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
...+|||+|+.+|+.+++++||+..++ ++. .+|.||||+|+..|+.++|++|+++|++++. .+..+.|
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~---------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t 97 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGAL--KNL---------LENEFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNT 97 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGG--GSC---------CTTCCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCC--CCC---------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCc
Confidence 457899999999999999999998433 221 2589999999999999999999999999763 2335689
Q ss_pred hhhhhhcccc----------cccCCCCCCCC-ChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCC-CCCCHHHHH
Q 005192 511 QLVDRAGSGF----------IFKPNVIGPAG-LTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYA 578 (709)
Q Consensus 511 ~L~~a~~~~~----------l~d~na~d~~G-~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~-~G~TPLh~A 578 (709)
|||+|+..+. ..++|.++..| .||||+|+..++. +++++|++.+ + +..|. .|.||||+|
T Consensus 98 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~-~~v~~Ll~~g------~--~~~~~~~g~t~L~~A 168 (285)
T 3kea_A 98 ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDV-SIVSYFLSEI------P--STFDLAILLSCIHIT 168 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCH-HHHHHHHTTS------C--TTCCCSTHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH-HHHHHHHhCC------C--ccccccCCccHHHHH
Confidence 9999975543 35889999999 7999999998765 5899999875 2 22344 899999999
Q ss_pred HHcCCHHHHHHHHHHhhhcC
Q 005192 579 SLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 579 a~rG~~~iieLLl~k~~~~~ 598 (709)
+.+|+.+++++|++++++..
T Consensus 169 ~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 169 IKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp HHTTCHHHHHHHHHHHHHTC
T ss_pred HHcChHHHHHHHHHcCCCCC
Confidence 99999999999999877643
No 78
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.76 E-value=2.6e-19 Score=183.39 Aligned_cols=142 Identities=19% Similarity=0.096 Sum_probs=117.4
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
..+.||||+|+.+|+.+++++||+..++. +.. ...|.||||+|+..++.+++++|+++|++++. .+..+.
T Consensus 84 ~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~--~~~-------~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~ 153 (269)
T 4b93_B 84 QDGSSPLHVAALHGRADLIPLLLKHGANA--GAR-------NADQAVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGN 153 (269)
T ss_dssp TTSCCHHHHHHHTTCTTHHHHHHHTTCCT--TCC-------CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCC
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCCc--Ccc-------CCCCCCccccccccChHHHHHHHHHCCCCCCC-CCCCCC
Confidence 34679999999999999999999984332 221 34689999999999999999999999998872 223468
Q ss_pred hhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHH
Q 005192 510 KQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 579 (709)
Q Consensus 510 t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa 579 (709)
||||+|+..+. ..++|.++..|+||||+||..++. +++++|++.+ |++|++|.+|+||||+|+
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~G------ad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV-FVVELLLLHG------ASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHHTT------CCSCCCCTTSCCSGGGSC
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH-HHHHHHHHCC------CCCCCcCCCCCCHHHHHH
Confidence 99999975543 358999999999999999999765 4999999885 788999999999999999
Q ss_pred HcCCHHHHHHH
Q 005192 580 LRAHHSYIHLV 590 (709)
Q Consensus 580 ~rG~~~iieLL 590 (709)
.+|+ ++++|
T Consensus 227 ~~~~--i~~lL 235 (269)
T 4b93_B 227 QNSK--IMELL 235 (269)
T ss_dssp TTCH--HHHHT
T ss_pred hCCc--HHHHH
Confidence 8775 55554
No 79
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.76 E-value=3.6e-18 Score=178.24 Aligned_cols=131 Identities=19% Similarity=0.140 Sum_probs=110.1
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~---g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
.++|+.|+.+|..+.++.||+..++.+ .. ......+..|+||||+|+.. |+.++|++||++|++
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~--~~-~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad---------- 218 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFG--QP-LPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH---------- 218 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTT--SC-EECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC----------
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCccc--cc-CCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC----------
Confidence 357999999999999999998744322 10 00000134799999999997 899999999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 589 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieL 589 (709)
+|.+|..|+||||+||..++. +++++|++.+ |+++++|.+|.||||+|+.+|+.+++++
T Consensus 219 --------------vn~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~g------ad~~~~d~~G~TpL~~A~~~~~~~iv~~ 277 (301)
T 2b0o_E 219 --------------LDAKAADGNTALHYAALYNQP-DCLKLLLKGR------ALVGTVNEAGETALDIARKKHHKECEEL 277 (301)
T ss_dssp --------------TTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTT------CCCSCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred --------------CCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 788999999999999999765 5999999885 7789999999999999999999999999
Q ss_pred HHHHhhhc
Q 005192 590 VQRKINKK 597 (709)
Q Consensus 590 Ll~k~~~~ 597 (709)
|+++.+++
T Consensus 278 Ll~~ga~~ 285 (301)
T 2b0o_E 278 LEQAQAGT 285 (301)
T ss_dssp HHHHHHHT
T ss_pred HHHhcCCC
Confidence 99998874
No 80
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=2.4e-18 Score=190.73 Aligned_cols=131 Identities=19% Similarity=0.138 Sum_probs=109.9
Q ss_pred hHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCCcchh
Q 005192 434 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR---RNCRPMVELLLNYAPDNVLDKPGSRQK 510 (709)
Q Consensus 434 ~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~---~g~~eIVelLL~~gAd~~~d~~~~~~t 510 (709)
..||.|+.+|..++++.||+..++-+ ... .....+..|+||||+||+ .|+.++|++||++|++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n--~~~-~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~----------- 199 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFG--QPL-PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 199 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSS--SCB-CCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhccccc--CCC-CCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----------
Confidence 57999999999999999999854432 110 000113479999999977 9999999999999986
Q ss_pred hhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 005192 511 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 590 (709)
Q Consensus 511 ~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLL 590 (709)
+|.+|..|+||||+||..|+. +++++|++.+ |++|++|.+|.||||+|+.+|+.+++++|
T Consensus 200 -------------vn~~d~~g~TpLh~A~~~g~~-~~v~~Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 200 -------------LDAKAADGNTALHYAALYNQP-DCLKLLLKGR------ALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp -------------TTCCCSSSCCHHHHHTTTTCH-HHHHHHHHTC------CCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCccCCCCCcHHHHHHHcCCH-HHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 789999999999999999765 5999999885 78899999999999999999999999999
Q ss_pred HHHhhhcC
Q 005192 591 QRKINKKS 598 (709)
Q Consensus 591 l~k~~~~~ 598 (709)
++++++..
T Consensus 260 l~~ga~~~ 267 (497)
T 3lvq_E 260 EQAQAGTF 267 (497)
T ss_dssp HHTCC---
T ss_pred HHhCCCCC
Confidence 99988876
No 81
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.75 E-value=3e-19 Score=186.80 Aligned_cols=136 Identities=23% Similarity=0.154 Sum_probs=92.3
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCC---HHHHHHHHhcC-CCCCCCCC
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC---RPMVELLLNYA-PDNVLDKP 505 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~---~eIVelLL~~g-Ad~~~d~~ 505 (709)
...+||||+|+.+|+.++|++||+..++. +.. +..|+||||+|+.+|+ .++++.||+++ ++++ ..+
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~--n~~-------d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~-~~d 198 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNR--LYG-------DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI-LED 198 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TBC-------CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG-EEC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCc-------CCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc-CCC
Confidence 44689999999999999999999985442 221 2245555555555555 34444444443 2222 111
Q ss_pred Ccchhhhhhhhc---------------------------------------------------------ccccc--cCCC
Q 005192 506 GSRQKQLVDRAG---------------------------------------------------------SGFIF--KPNV 526 (709)
Q Consensus 506 ~~~~t~L~~a~~---------------------------------------------------------~~~l~--d~na 526 (709)
..++||||+|+. ..+++ ++|.
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~ 278 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA 278 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCC
Confidence 223455555432 11111 5899
Q ss_pred CCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 005192 527 IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 582 (709)
Q Consensus 527 ~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG 582 (709)
+|..|+||||+||..++. +++++|++.+ |++|++|.+|+||||+|+.+|
T Consensus 279 ~d~~G~TpLh~A~~~g~~-~~v~~Ll~~G------ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 279 QDSNGDTCLNIAARLGNI-SIVDALLDYG------ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCTTSCCHHHHHHHHCCH-HHHHHHHHTT------CCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCHHHHHHHcCCH-HHHHHHHHcC------CCCcccCCCCCCHHHHHHhcC
Confidence 999999999999999765 5999999885 788999999999999998765
No 82
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.74 E-value=9.8e-18 Score=180.98 Aligned_cols=126 Identities=21% Similarity=0.098 Sum_probs=108.5
Q ss_pred chHHHHHHhC-CChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 433 KWLLEFSMEH-DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 433 r~lL~fAve~-g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
.++||+|+.. |+.++++.||+..++. +..+ ....|.||||+|+..|+.++|++||++|++
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadv--n~~~-----~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------------ 260 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADV--NWVN-----GGQDNATPLIQATAANSLLACEFLLQNGAN------------ 260 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCT--TCCC-----TTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCC--Cccc-----cccCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 4699999999 9999999999984442 2221 124689999999999999999999999986
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 591 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl 591 (709)
+|.+|..|+||||+|+..++. +++++|+..+ |++|++|.+|.||||+|+..|+.+++++|+
T Consensus 261 ------------vn~~d~~G~TpLh~A~~~g~~-~~v~~LL~~G------ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 261 ------------VNQADSAGRGPLHHATILGHT-GLACLFLKRG------ADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCcH-HHHHHHHHCc------CCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 788999999999999999765 5999999885 778999999999999999999999999998
Q ss_pred HHhhh
Q 005192 592 RKINK 596 (709)
Q Consensus 592 ~k~~~ 596 (709)
....+
T Consensus 322 ~~~~~ 326 (368)
T 3jue_A 322 LAKMR 326 (368)
T ss_dssp HHHC-
T ss_pred HcCCC
Confidence 76543
No 83
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.72 E-value=9.8e-18 Score=169.54 Aligned_cols=122 Identities=22% Similarity=0.187 Sum_probs=106.1
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
..++||+|+.+|+.++++.||+..++ ++.. +..|.||||+|+..|+.++|++||++|++
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------ 98 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGAD--INYA-------NVDGLTALHQACIDDNVDMVKFLVENGAN------------ 98 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCC--TTCB-------CTTCCBHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCC--Cccc-------CCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------
Confidence 36899999999999999999998433 2221 34699999999999999999999999986
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 591 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl 591 (709)
+|.+|..|+||||+|+..++.+ ++++|++.+ ++++.+|.+|.||||+|+..|+.++++.++
T Consensus 99 ------------~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 99 ------------INQPDNEGWIPLHAAASCGYLD-IAEYLISQG------AHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHTT------CCTTCCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHcCCHH-HHHHHHhCC------CCCCCcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 7889999999999999997655 999999885 677999999999999999999999998776
Q ss_pred HH
Q 005192 592 RK 593 (709)
Q Consensus 592 ~k 593 (709)
.+
T Consensus 160 ~~ 161 (299)
T 1s70_B 160 NR 161 (299)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 84
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.72 E-value=9.9e-18 Score=160.06 Aligned_cols=117 Identities=15% Similarity=-0.035 Sum_probs=100.8
Q ss_pred cCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhc
Q 005192 472 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACR 541 (709)
Q Consensus 472 ~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~ 541 (709)
..|+||||+|+..|+.+++++|+++|++++. .+..+.||||+|+..+. ..++|.+|..|.||||+|+..
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 3699999999999999999999999998762 22346899999975433 357899999999999999998
Q ss_pred CChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 542 DDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 542 ~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
++. +++++|++.+ +++|.+|..|.||||+|+..|+.+++++|+++.++
T Consensus 112 ~~~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 159 (192)
T 2rfm_A 112 GYS-EMSYFLLEHG------ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD 159 (192)
T ss_dssp TCH-HHHHHHHHTT------CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCH-HHHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 765 4899999875 67899999999999999999999999999987655
No 85
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.72 E-value=2.4e-17 Score=152.18 Aligned_cols=114 Identities=21% Similarity=0.155 Sum_probs=98.6
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCC
Q 005192 474 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDD 543 (709)
Q Consensus 474 G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~ 543 (709)
..|+||.|++.|+.+++++|+++|++.+. +..+.||||+|+..+. ..++|.+|..|+||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTT--DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCC--CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 35899999999999999999999998653 4456899999964433 35789999999999999999876
Q ss_pred hHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 544 AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 544 ~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
. +++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|+++.++
T Consensus 80 ~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 125 (153)
T 1awc_B 80 A-NIVEVLLKHG------ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125 (153)
T ss_dssp H-HHHHHHHTTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred H-HHHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5 5899999875 67899999999999999999999999999988655
No 86
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.71 E-value=2.8e-17 Score=146.58 Aligned_cols=93 Identities=24% Similarity=0.129 Sum_probs=84.3
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHh
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 552 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl 552 (709)
.|.||||+|++.|+.+++++|+++|++ +|.+|..|+||||+|+..++. +++++|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll 60 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGED------------------------VNRTLEGGRKPLHYAADCGQL-EILEFLL 60 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCC------------------------TTSCCTTSSCHHHHHHHTTCH-HHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC------------------------cCccCCCCCcHHHHHHHcCCH-HHHHHHH
Confidence 578999999999999999999999976 688999999999999998765 5899999
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 553 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 553 ~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+.+ +++|.+|..|+||||+|+.+|+.+++++|+++.++
T Consensus 61 ~~g------~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 61 LKG------ADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 98 (123)
T ss_dssp TTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HcC------CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 875 77899999999999999999999999999988654
No 87
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.71 E-value=2.4e-17 Score=153.66 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=99.3
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcC
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRD 542 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~ 542 (709)
.|.||||.|++.|+.+++++|++.|++++. .+..+.||||+|+..+. ..++|.+|..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 478999999999999999999999988652 22356899999975433 3578999999999999999997
Q ss_pred ChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 543 DAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 543 ~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+. +++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|+++.++
T Consensus 81 ~~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 127 (167)
T 3v31_A 81 YT-DIVKMLLDCG------VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD 127 (167)
T ss_dssp CH-HHHHHHHHHT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CH-HHHHHHHHCC------CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 65 4899998875 67799999999999999999999999999987655
No 88
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.71 E-value=3.6e-17 Score=151.04 Aligned_cols=114 Identities=18% Similarity=0.122 Sum_probs=98.7
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCC
Q 005192 474 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDD 543 (709)
Q Consensus 474 G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~ 543 (709)
..||||.|++.|+.+++++|+++|++++. .+..+.||||+|.. +. ..++|.+|..|+||||+|+..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46999999999999999999999998762 23356899999975 33 35889999999999999999876
Q ss_pred hHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 544 AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 544 ~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
. +++++|++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++.++
T Consensus 83 ~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 83 L-DTLQTLLEFQ------ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp H-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred H-HHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 5 4899999875 67899999999999999999999999999988665
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.71 E-value=2.7e-17 Score=149.09 Aligned_cols=95 Identities=28% Similarity=0.292 Sum_probs=86.1
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
+..|+||||+|+..|+.+++++||++|++ +|.+|..|+||||+|+..++. +++++
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~-~~~~~ 61 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------PNVKDHAGWTPLHEACNHGHL-KVVEL 61 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHHHTTCH-HHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCcCCCCCCCHHHHHHHcCCH-HHHHH
Confidence 45799999999999999999999999986 688999999999999998765 48999
Q ss_pred HhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 551 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
|++.+ ++++.+|..|.||||+|+.+|+.+++++|+++.++
T Consensus 62 Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 101 (137)
T 3c5r_A 62 LLQHK------ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS 101 (137)
T ss_dssp HHHTT------CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcC------CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99885 67899999999999999999999999999987665
No 90
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.70 E-value=1.7e-17 Score=146.07 Aligned_cols=96 Identities=28% Similarity=0.306 Sum_probs=86.7
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
+..|+||||+|+..|+.+++++|+++|++ +|.+|..|+||||+|+..++. +++++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~~~~~-~~~~~ 60 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------VNARSKDGNTPLHLAAKNGHA-EIVKL 60 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC------------------------SSCCCSSSCCTTHHHHTTTCH-HHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCcH-HHHHH
Confidence 34799999999999999999999999976 688999999999999998765 58999
Q ss_pred HhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 551 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
|++.+ ++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 61 Ll~~g------~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 61 LLAKG------ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp HTTTT------CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred HHHcC------CCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 99875 678999999999999999999999999999887653
No 91
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.70 E-value=5.4e-17 Score=152.45 Aligned_cols=117 Identities=23% Similarity=0.195 Sum_probs=100.1
Q ss_pred cCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhc
Q 005192 472 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACR 541 (709)
Q Consensus 472 ~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~ 541 (709)
..+.|+||+|++.|+.++|++|+++|++++. .+..+.||||+|+..+. ..++|.+|..|+||||+|+..
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 3578999999999999999999999998762 22356899999975433 357899999999999999998
Q ss_pred CChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 542 DDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 542 ~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
++. +++++|++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++.++
T Consensus 91 ~~~-~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 91 GHL-EIVEVLLKNG------ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138 (169)
T ss_dssp TCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCH-HHHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 765 5899999885 67899999999999999999999999999987655
No 92
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.70 E-value=4.8e-17 Score=151.35 Aligned_cols=108 Identities=21% Similarity=0.086 Sum_probs=89.4
Q ss_pred cCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHH
Q 005192 472 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 551 (709)
Q Consensus 472 ~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lL 551 (709)
..|.|+||.|++.|+.++++.|++.+.. +++..+..|.||||+|+..++. +++++|
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~-----------------------~~~~~~~~g~t~L~~A~~~~~~-~~v~~L 61 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSV-----------------------NCRDIEGRQSTPLHFAAGYNRV-SVVEYL 61 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTT-----------------------TCCCTTTTCCCHHHHHHHTTCH-HHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCC-----------------------CccccccCCCCHHHHHHHcChH-HHHHHH
Confidence 3688999999999999999999986542 3677888999999999999765 589999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeecC
Q 005192 552 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 609 (709)
Q Consensus 552 l~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i~ 609 (709)
++.+ +++|.+|..|.||||+|+.+|+.+++++|+++..+.. ...|.+++.+.
T Consensus 62 l~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 115 (165)
T 3twr_A 62 LQHG------ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEA 115 (165)
T ss_dssp HHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred HhcC------CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 9875 6779999999999999999999999999999866532 13455555543
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.70 E-value=6.3e-18 Score=164.64 Aligned_cols=123 Identities=11% Similarity=-0.028 Sum_probs=101.8
Q ss_pred hHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCcch
Q 005192 434 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCR----PMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 434 ~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~----eIVelLL~~gAd~~~d~~~~~~ 509 (709)
++|+.|++.|..+.++.++.... +. . .+..|+||||+|+.+++. +||++||++|++
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~----~~-----~-~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad---------- 67 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY----ED-----K-ESVLKSNILYDVLRNNNDEARYKISMFLINKGAD---------- 67 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS----SC-----H-HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC----------
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc----cc-----c-cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC----------
Confidence 47899999999999999988621 11 1 124699999999999985 599999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCCh-----HHHHHHHhcCCCCCCccccccccCCCCC-CHHHHHHHcC-
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-----ENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYASLRA- 582 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~-----e~Vv~lLl~~p~~vGi~A~vNarD~~G~-TPLh~Aa~rG- 582 (709)
+|.+|..|+||||+|+..+.. .+++++|++++ |++|++|..|. ||||+|+..|
T Consensus 68 --------------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G------adin~~d~~g~ttpLh~A~~~~~ 127 (186)
T 3t8k_A 68 --------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG------ADITALYKPYKIVVFKNIFNYFV 127 (186)
T ss_dssp --------------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT------CCSSSCBGGGTBCTTGGGGGCCS
T ss_pred --------------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC------CCCCccCCCcCchHHHHHHHcCC
Confidence 789999999999999987642 35799999885 78899999999 9999999954
Q ss_pred ----CHHHHHHHHH-Hhhh
Q 005192 583 ----HHSYIHLVQR-KINK 596 (709)
Q Consensus 583 ----~~~iieLLl~-k~~~ 596 (709)
+.+++++|++ ++++
T Consensus 128 ~~~~~~~iv~~Ll~~~gad 146 (186)
T 3t8k_A 128 DENEMIPLYKLIFSQSGLQ 146 (186)
T ss_dssp CHHHHHHHHHHHHTSTTCC
T ss_pred ChhhHHHHHHHHHHhcCCC
Confidence 4568899987 6655
No 94
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.69 E-value=6.3e-17 Score=151.51 Aligned_cols=116 Identities=14% Similarity=0.076 Sum_probs=97.6
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcCC
Q 005192 474 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDD 543 (709)
Q Consensus 474 G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~~ 543 (709)
+.||||.|++.|+.++++.||+.+++.....+..+.||||+|+..+. ..++|.+|..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 46899999999999999999999976322334457899999975543 35889999999999999999876
Q ss_pred hHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 544 AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 544 ~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
. +++++|++.+ +++|.+|..|.||||+|+.+|+.+++++|+++.++
T Consensus 82 ~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 127 (172)
T 3v30_A 82 T-DIVGLLLERD------VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD 127 (172)
T ss_dssp H-HHHHHHHTTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred H-HHHHHHHHcC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5 5899999875 67899999999999999999999999999987654
No 95
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=8.5e-17 Score=142.06 Aligned_cols=89 Identities=25% Similarity=0.205 Sum_probs=80.8
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
+..|.|+||+|+..|+.+++++||++|++ +|.+|..|.||||+|+..++. +++++
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------i~~~d~~g~tpLh~A~~~~~~-~~v~~ 75 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VAAKDKNGSTPLHLAARNGHL-EVVKL 75 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHTTCH-HHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCH-HHHHH
Confidence 45789999999999999999999999986 688999999999999998765 58999
Q ss_pred HhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 005192 551 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 590 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLL 590 (709)
|++.+ +++|.+|..|.||||+|+.+|+.+++++|
T Consensus 76 Ll~~g------a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 76 LLEAG------ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcC------CCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99885 67899999999999999999999999987
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.69 E-value=6.9e-17 Score=146.80 Aligned_cols=94 Identities=23% Similarity=0.252 Sum_probs=85.2
Q ss_pred cCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHH
Q 005192 472 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 551 (709)
Q Consensus 472 ~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lL 551 (709)
..|.||||+|++.|+.++|++|+++|++ +|.+|..|+||||+|+..++. +++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~-~~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD------------------------VNAKDEYGLTPLYLATAHGHL-EIVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHHTCH-HHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCH-HHHHHH
Confidence 4688999999999999999999999976 688999999999999998765 489999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 552 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 552 l~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++.++
T Consensus 67 l~~g------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 105 (136)
T 2jab_A 67 LKNG------ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD 105 (136)
T ss_dssp HHTT------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHcC------CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9875 67899999999999999999999999999987554
No 97
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.68 E-value=1.8e-16 Score=150.03 Aligned_cols=116 Identities=20% Similarity=0.134 Sum_probs=96.6
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhc
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACR 541 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gA-d~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~ 541 (709)
.++++||.|++.|+.++|++||+.+. +++ ..+..+.||||+|+..+. ..++|.+|..|.||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLN-QGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCccccc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 47899999999999999999999853 443 233457899999975543 358899999999999999998
Q ss_pred CChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 542 DDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 542 ~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
++. +++++|++.+ +++|.+|..|.||||+|+..|+.+++++|+++.++
T Consensus 83 ~~~-~~v~~Ll~~g------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 130 (179)
T 3f6q_A 83 GHR-DIVQKLLQYK------ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL 130 (179)
T ss_dssp TCH-HHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCH-HHHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 765 5999999885 67899999999999999999999999999987665
No 98
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.68 E-value=1.9e-16 Score=145.62 Aligned_cols=111 Identities=23% Similarity=0.161 Sum_probs=93.5
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCcchhhhhhhhcccc----------cccCCCCCCCCChHHHHHHhcC
Q 005192 474 EMGLLHKAVRRNCRPMVELLLNYA-PDNVLDKPGSRQKQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRD 542 (709)
Q Consensus 474 G~TpLH~AV~~g~~eIVelLL~~g-Ad~~~d~~~~~~t~L~~a~~~~~----------l~d~na~d~~G~TPLHlAA~~~ 542 (709)
+.|+||.|++.|+.++++.||+.. .+.+ ..+..+.||||+ +..+. ..++|.+|..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPD-ALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTT-CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCcc-ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 569999999999999999999982 2443 223457899999 53332 3588999999999999999987
Q ss_pred ChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHH
Q 005192 543 DAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 593 (709)
Q Consensus 543 ~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k 593 (709)
+. +++++|++.+ +++|.+|.+|.||||+|+.+|+.+++++|+++
T Consensus 80 ~~-~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 80 FL-DTLKVLVEHG------ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp CH-HHHHHHHHTT------CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cH-HHHHHHHHcC------CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 65 5899999875 67899999999999999999999999999987
No 99
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.67 E-value=4.9e-17 Score=147.76 Aligned_cols=94 Identities=21% Similarity=0.171 Sum_probs=84.6
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
+..|.||||+|+++|+.+++++||++|++ +|.+|..|+||||+|+. ++. +++++
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~-~~~-~~v~~ 62 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAGAD------------------------PNALNRFGRRPIQVMMM-GSA-QVAEL 62 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTCCTTTTTSTT-SCH-HHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCCC------------------------cCCcCCCCCCHHHHHHc-CCH-HHHHH
Confidence 34799999999999999999999999976 78899999999999999 665 58999
Q ss_pred HhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 551 LTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~-G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
|++.+ +++|.+|.. |.||||+|+.+|+.+++++|+++.++
T Consensus 63 Ll~~g------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 103 (136)
T 1d9s_A 63 LLLHG------AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (136)
T ss_dssp HHHHT------CCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC
T ss_pred HHHCC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 98875 678999999 99999999999999999999987554
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.66 E-value=3.1e-16 Score=137.62 Aligned_cols=93 Identities=31% Similarity=0.328 Sum_probs=83.6
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHh
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 552 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl 552 (709)
+|+||||+|++.|+.+++++|+++|++ ++.++..|.||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHHHcCcHH-HHHHHH
Confidence 488999999999999999999999976 6788999999999999987654 899998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 553 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 553 ~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+.+ ++++.+|..|.||||+|+.+|+.+++++|+++..+
T Consensus 56 ~~g------~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 93 (126)
T 1n0r_A 56 EAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93 (126)
T ss_dssp HTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcC------CCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCC
Confidence 875 66799999999999999999999999999987544
No 101
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.66 E-value=2.4e-16 Score=157.37 Aligned_cols=96 Identities=22% Similarity=0.208 Sum_probs=86.9
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
...|.||||+|++.|+.++|++||++|++ +|.+|..|+||||+||..++. +++++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~d~~g~tpLh~A~~~g~~-~~v~~ 72 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMND------------------------PSQPNEEGITALHNAICGANY-SIVDF 72 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSC------------------------TTCCCTTSCCHHHHHHHTTCH-HHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCC------------------------CCCCCCCCCCHHHHHHHcCCH-HHHHH
Confidence 44788999999999999999999999986 788999999999999998765 59999
Q ss_pred HhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Q 005192 551 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~ 597 (709)
|++.+ +++|.+|..|+||||+|+.+|+.+++++|+++.++.
T Consensus 73 Ll~~g------a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 73 LITAG------ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp HHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 99885 778999999999999999999999999999886653
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.65 E-value=4e-16 Score=152.56 Aligned_cols=108 Identities=19% Similarity=0.176 Sum_probs=91.2
Q ss_pred cCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHH
Q 005192 472 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 551 (709)
Q Consensus 472 ~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lL 551 (709)
..|.||||+|+..|+.++|++||++|++ +|.+|..|+||||+||..++. +++++|
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~-~~v~~L 125 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVG------------------------VNGLDKAGSTALYWACHGGHK-DIVEML 125 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCH-HHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCC------------------------ccccCCCCCCHHHHHHHcCCH-HHHHHH
Confidence 3688999999999999999999999976 788999999999999998765 599999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC--CCCCeeEeecC
Q 005192 552 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 609 (709)
Q Consensus 552 l~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~--~~~~~v~~~i~ 609 (709)
++.+ ++++|.+|..|.||||+|+.+|+.+++++|+++.++.. ..+|...+.+.
T Consensus 126 l~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 180 (222)
T 3ehr_A 126 FTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA 180 (222)
T ss_dssp TTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHC
T ss_pred HcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHh
Confidence 8873 26789999999999999999999999999999876532 13445555544
No 103
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.62 E-value=7.6e-16 Score=146.99 Aligned_cols=94 Identities=17% Similarity=0.091 Sum_probs=84.6
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
+..|.||||+|++.|+.+++++||+ |++ +|.+|..|+||||+|+..++. +++++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~~~~-~~v~~ 94 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSD-KCVRL 94 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC------------------------TTCCCTTSCCHHHHHHHHTCH-HHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC------------------------CCCcCCCCCCHHHHHHHcCCH-HHHHH
Confidence 3478999999999999999999999 765 788999999999999999765 48999
Q ss_pred HhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 551 LTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD-~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
|++.+ +++|.+| .+|+||||+|+.+|+.+++++|+++.++
T Consensus 95 Ll~~g------a~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 135 (183)
T 3deo_A 95 LAEAG------ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 135 (183)
T ss_dssp HHHTT------CCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcC------CCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Confidence 99885 6788898 8999999999999999999999988665
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.62 E-value=4.5e-16 Score=136.88 Aligned_cols=106 Identities=25% Similarity=0.177 Sum_probs=88.9
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
+..+++||+|+.+|..++++.|++..++ ++.. +..|.||||+|+..|+.+++++|+++|++
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~-------d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------- 67 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGAD--VNAR-------SKDGNTPLHLAAKNGHAEIVKLLLAKGAD---------- 67 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCC--SSCC-------CSSSCCTTHHHHTTTCHHHHHHHTTTTCC----------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCc-------CCCCCCHHHHHHHcCcHHHHHHHHHcCCC----------
Confidence 4567899999999999999999998433 2222 34799999999999999999999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 575 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPL 575 (709)
+|.+|..|+||||+|+..++. +++++|++.+ |++|.+|..|.||-
T Consensus 68 --------------~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~g------a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 --------------VNARSKDGNTPEHLAKKNGHH-EIVKLLDAKG------ADVNARSWGSSHHH 112 (115)
T ss_dssp --------------TTCCCTTCCCTTHHHHTTTCH-HHHHHHHTTS------SSHHHHSCCCC---
T ss_pred --------------CcccCCCCCCHHHHHHHCCCH-HHHHHHHHcC------CCCCcCCccccccc
Confidence 688999999999999998765 5999999885 78899999999984
No 105
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.62 E-value=5.1e-16 Score=144.23 Aligned_cols=94 Identities=21% Similarity=0.194 Sum_probs=83.5
Q ss_pred hcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHH
Q 005192 471 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 550 (709)
Q Consensus 471 ~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~l 550 (709)
...|.||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+ .++ .+++++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~-~~~-~~~v~~ 62 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN------------------------PNAPNSYGRRPIQVMM-MGS-ARVAEL 62 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC------------------------TTCCCSSSCCTTTSSC-TTC-HHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHH-cCC-HHHHHH
Confidence 34689999999999999999999999976 6889999999999985 554 559999
Q ss_pred HhcCCCCCCccccccccCCCCCC-HHHHHHHcCCHHHHHHHHHHhhh
Q 005192 551 LTDDPGSVGIEAWKSAQDSTGLT-PNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~G~T-PLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
|++.+ +++|.+|..|.| |||+|+.+|+.+++++|+++.++
T Consensus 63 Ll~~g------~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~ 103 (156)
T 1bi7_B 63 LLLHG------AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (156)
T ss_dssp HHTTT------CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHcC------CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99875 778999999999 99999999999999999998655
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.60 E-value=2.9e-15 Score=127.63 Aligned_cols=90 Identities=30% Similarity=0.279 Sum_probs=77.0
Q ss_pred cchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhh
Q 005192 432 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 511 (709)
Q Consensus 432 ~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~ 511 (709)
.+||||+|+.+|+.+++++|++..++ ++.. +..|+||||+|+.+|+.+++++|+++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~--~n~~-------d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------ 60 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD--VNAK-------DKNGRTPLHLAARNGHLEVVKLLLEAGAD------------ 60 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC--Cccc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 36899999999999999999998433 2222 34799999999999999999999999986
Q ss_pred hhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCC
Q 005192 512 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 555 (709)
Q Consensus 512 L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p 555 (709)
+|.+|..|+||||+|+..++. +++++|++.+
T Consensus 61 ------------~~~~d~~g~t~l~~A~~~~~~-~~~~~Ll~~g 91 (93)
T 1n0q_A 61 ------------VNAKDKNGRTPLHLAARNGHL-EVVKLLLEAG 91 (93)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTT
T ss_pred ------------CCccCCCCCCHHHHHHHcCCH-HHHHHHHHcC
Confidence 788999999999999998765 5999998775
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.60 E-value=1.6e-16 Score=171.84 Aligned_cols=145 Identities=13% Similarity=0.075 Sum_probs=103.1
Q ss_pred chHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCcchhh
Q 005192 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-LDKPGSRQKQ 511 (709)
Q Consensus 433 r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~-~d~~~~~~t~ 511 (709)
+||||+|+.+|+.++++.|++....... .. ..+..|.||||+|+++|+.++|++|+++|++.. .+.+....||
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-~~-----~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~Tp 166 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI-VK-----VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA 166 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS-CC-------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH-HH-----HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCH
Confidence 5899999999999999999998431100 00 012357899999999999999999999997521 0011112788
Q ss_pred hhhhhcccc----------cccCCC--CCCCCChHHHHHH-hcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHH
Q 005192 512 LVDRAGSGF----------IFKPNV--IGPAGLTPLHVAA-CRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 578 (709)
Q Consensus 512 L~~a~~~~~----------l~d~na--~d~~G~TPLHlAA-~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~A 578 (709)
||+|+..+. ..+++. +|..|.||||+|| ..|+. +++++|++++ + .|.||||+|
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~-eiv~~Ll~~g------a-------~~~taL~~A 232 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH-NVINFLLDCP------V-------MLAYAEIHE 232 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH-HHHHHHTTSH------H-------HHHHHHHCT
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH-HHHHHHHhCC------C-------ccchHHHHH
Confidence 888875544 234444 6777888888888 77654 4888887753 1 278888888
Q ss_pred HHcCCHHHHHHHHHHhhhc
Q 005192 579 SLRAHHSYIHLVQRKINKK 597 (709)
Q Consensus 579 a~rG~~~iieLLl~k~~~~ 597 (709)
+.+|+.+++++|++++++.
T Consensus 233 a~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp TTTTTTTHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCccc
Confidence 8888888888888876654
No 108
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.59 E-value=8.3e-16 Score=160.37 Aligned_cols=109 Identities=18% Similarity=0.073 Sum_probs=85.4
Q ss_pred hccchHHHHHHhC---CChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 005192 430 KRFKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 506 (709)
Q Consensus 430 ~R~r~lL~fAve~---g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~ 506 (709)
....+|||+|+.. |..+++++||+..++ ++.. +..|+||||+|+..|+.++|++||++|++
T Consensus 188 ~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad--vn~~-------d~~G~TpLh~A~~~g~~~~v~~Ll~~gad------- 251 (301)
T 2b0o_E 188 APEELVLHLAVKVANQASLPLVDFIIQNGGH--LDAK-------AADGNTALHYAALYNQPDCLKLLLKGRAL------- 251 (301)
T ss_dssp SCEECHHHHHHHTCCTTTHHHHHHHHHHSSC--TTCC-------CTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------
T ss_pred CCCccHHHHHHHhcccCcHHHHHHHHhcCCC--CCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 3468899999997 899999999999433 3322 34799999999999999999999999986
Q ss_pred cchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCCH
Q 005192 507 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 584 (709)
Q Consensus 507 ~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~ 584 (709)
+|.+|..|+||||+|+..++. +++++|++.+ + +.|.||||+|+..|+.
T Consensus 252 -----------------~~~~d~~G~TpL~~A~~~~~~-~iv~~Ll~~g------a------~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 252 -----------------VGTVNEAGETALDIARKKHHK-ECEELLEQAQ------A------GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp -----------------CSCCCTTSCCHHHHHHHHTCH-HHHHHHHHHH------H------HTTSSCCC--------
T ss_pred -----------------CCCcCCCCCCHHHHHHHcCCH-HHHHHHHHhc------C------CCCCChhHHHHhcCCc
Confidence 788999999999999998765 5899998763 2 2689999999998874
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.59 E-value=1.6e-15 Score=152.23 Aligned_cols=93 Identities=17% Similarity=0.092 Sum_probs=84.3
Q ss_pred cCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHH
Q 005192 472 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 551 (709)
Q Consensus 472 ~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lL 551 (709)
..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++. +++++|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~g~~-~~v~~L 96 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSD-KCVRLL 96 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC------------------------TTCBCTTSCBHHHHHHHHTCH-HHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC------------------------CCCcCCCCCCHHHHHHHCCCH-HHHHHH
Confidence 468999999999999999999999 875 788999999999999999765 489999
Q ss_pred hcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 552 TDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 552 l~~p~~vGi~A~vNarD-~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
++.+ +++|.+| ..|+||||+|+.+|+.+++++|+++.++
T Consensus 97 l~~g------a~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 136 (244)
T 3ui2_A 97 AEAG------ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 136 (244)
T ss_dssp HHTT------CCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHcC------CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9885 7788998 8899999999999999999999998665
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.54 E-value=4.2e-16 Score=168.59 Aligned_cols=138 Identities=9% Similarity=-0.038 Sum_probs=104.1
Q ss_pred ccchHHHHHHhCCChHhHHHHHhhhcCCc-cCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCcc
Q 005192 431 RFKWLLEFSMEHDWCAVVKKLLGILFDGT-VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPGSR 508 (709)
Q Consensus 431 R~r~lL~fAve~g~~aVvk~LLd~l~~ga-v~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~-d~~~~~ 508 (709)
+..+|||+|+.+|+.++|++|++..++.. .+.. . .+.||||+|+.+|+.++|++|+++|++++. ..+..+
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~-------~-~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g 198 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ-------A-ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAEN 198 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS-------H-HHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccC-------C-CCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCC
Confidence 45679999999999999999999832210 1111 1 228999999999999999999999997431 123346
Q ss_pred hhhhhhhh-ccccc----ccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 005192 509 QKQLVDRA-GSGFI----FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 583 (709)
Q Consensus 509 ~t~L~~a~-~~~~l----~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~ 583 (709)
.||||+|+ ..+.. +-++ .+..|.||||+|+..|+.+ ++++|++++ ++++.+| +++++|+.+||
T Consensus 199 ~TpL~~Aa~~~G~~eiv~~Ll~-~ga~~~taL~~Aa~~g~~e-vv~lL~~~g------a~~~~~~----~~l~~A~~~g~ 266 (376)
T 2aja_A 199 YYAFRWAAVGRGHHNVINFLLD-CPVMLAYAEIHEFEYGEKY-VNPFIARHV------NRLKEMH----DAFKLSNPDGV 266 (376)
T ss_dssp HHHHHHHHSTTCCHHHHHHHTT-SHHHHHHHHHCTTTTTTTT-HHHHHHHHH------HHHHHHH----TTTTTTSSSSC
T ss_pred CCHHHHHHHHCCCHHHHHHHHh-CCCccchHHHHHHHCCCHH-HHHHHHhcC------ccccccc----HHHHHHHHCCC
Confidence 89999999 77762 1122 3456999999999998765 999998874 5566665 47889999999
Q ss_pred HHHHH
Q 005192 584 HSYIH 588 (709)
Q Consensus 584 ~~iie 588 (709)
.++++
T Consensus 267 ~~vv~ 271 (376)
T 2aja_A 267 FDLVT 271 (376)
T ss_dssp CCCSS
T ss_pred hhhhc
Confidence 88664
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.45 E-value=2.2e-13 Score=120.13 Aligned_cols=88 Identities=19% Similarity=0.120 Sum_probs=74.8
Q ss_pred hccchHHHHHHhCCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcch
Q 005192 430 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509 (709)
Q Consensus 430 ~R~r~lL~fAve~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~ 509 (709)
..+.++||+|+.+|+.++++.|++..++ ++.. +..|+||||+|+..|+.+++++||++|++
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--i~~~-------d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~---------- 82 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGAD--VAAK-------DKNGSTPLHLAARNGHLEVVKLLLEAGAD---------- 82 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCC-------CTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCC--CCcc-------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------
Confidence 4468899999999999999999998433 2222 34799999999999999999999999986
Q ss_pred hhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHH
Q 005192 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 551 (709)
Q Consensus 510 t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lL 551 (709)
+|.+|..|+||||+|+..++. +++++|
T Consensus 83 --------------~~~~d~~g~tpl~~A~~~~~~-~~~~~L 109 (110)
T 2zgd_A 83 --------------VXAQDKFGKTAFDISIDNGNE-DLAEIL 109 (110)
T ss_dssp --------------TTCCCTTSCCHHHHHHHHTCH-HHHHHH
T ss_pred --------------ccccccCCCcHHHHHHHcCCH-HHHHHh
Confidence 688999999999999998765 488866
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.44 E-value=1.7e-13 Score=151.82 Aligned_cols=105 Identities=19% Similarity=0.096 Sum_probs=79.6
Q ss_pred hccchHHHHHHh---CCChHhHHHHHhhhcCCccCCCCCCchhhhcCcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 005192 430 KRFKWLLEFSME---HDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 506 (709)
Q Consensus 430 ~R~r~lL~fAve---~g~~aVvk~LLd~l~~gav~~~~~s~~~~~~~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~ 506 (709)
....||||+|+. +|+.+++++||+..++ ++.. +..|+||||+|+..|+.++|++||++||+
T Consensus 169 ~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~--vn~~-------d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~------- 232 (497)
T 3lvq_E 169 APEELVLHLAVKVANQASLPLVDFIIQNGGH--LDAK-------AADGNTALHYAALYNQPDCLKLLLKGRAL------- 232 (497)
T ss_dssp CSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC--TTCC-------CSSSCCHHHHHTTTTCHHHHHHHHHTCCC-------
T ss_pred cccchHHHHHHHhcccccHHHHHHHHHcCCC--CCcc-------CCCCCcHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 346899999965 9999999999998433 3332 34799999999999999999999999986
Q ss_pred cchhhhhhhhcccccccCCCCCCCCChHHHHHHhcCChHHHHHHHhcCCCCCCccccccccCCCCCCHHHHHHH
Q 005192 507 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 580 (709)
Q Consensus 507 ~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~~~e~Vv~lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~ 580 (709)
+|.+|..|+||||+|+..++. +++++|++.+ |++++ ||+|++..
T Consensus 233 -----------------~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~g------a~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 233 -----------------VGTVNEAGETALDIARKKHHK-ECEELLEQAQ------AGTFA------FPLHVDYS 276 (497)
T ss_dssp -----------------CSCCCTTCCCHHHHHHHTTCH-HHHHHHHHTC------C------------------
T ss_pred -----------------CCCcCCCCCCHHHHHHHcCCH-HHHHHHHHhC------CCCCC------Ccceeecc
Confidence 789999999999999998765 5999999885 54555 57776654
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.43 E-value=2e-13 Score=147.40 Aligned_cols=93 Identities=22% Similarity=0.195 Sum_probs=83.9
Q ss_pred CcccHHHHHHHc-CCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCC--CCCChHHHHHHhcCChHHHHH
Q 005192 473 LEMGLLHKAVRR-NCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIG--PAGLTPLHVAACRDDAENVLD 549 (709)
Q Consensus 473 ~G~TpLH~AV~~-g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d--~~G~TPLHlAA~~~~~e~Vv~ 549 (709)
.+.|+||+|+.. ++.+++++||++|++ +|.++ ..|.||||+||..++. ++++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad------------------------vn~~~~~~~g~TpLh~Aa~~g~~-~iv~ 252 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD------------------------VNWVNGGQDNATPLIQATAANSL-LACE 252 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC------------------------TTCCCTTTTCCCHHHHHHHTTCH-HHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC------------------------CCccccccCCCCHHHHHHHCCCH-HHHH
Confidence 567999999999 999999999999987 56666 8999999999998765 5899
Q ss_pred HHhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhh
Q 005192 550 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 596 (709)
Q Consensus 550 lLl~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~ 596 (709)
+|++.+ +++|.+|..|+||||+|+..|+.+++++|+++.++
T Consensus 253 ~LL~~G------advn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad 293 (368)
T 3jue_A 253 FLLQNG------ANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293 (368)
T ss_dssp HHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHcC------CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC
Confidence 999885 77899999999999999999999999999988665
No 114
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.38 E-value=1e-12 Score=135.34 Aligned_cols=102 Identities=17% Similarity=0.085 Sum_probs=85.9
Q ss_pred CcccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCcchhhhhhhhcccccccCCCCCCCCChHHHHHHhcC--ChHHHHHH
Q 005192 473 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRD--DAENVLDA 550 (709)
Q Consensus 473 ~G~TpLH~AV~~g~~eIVelLL~~gAd~~~d~~~~~~t~L~~a~~~~~l~d~na~d~~G~TPLHlAA~~~--~~e~Vv~l 550 (709)
...++||.|++.|+.+.++.|++.|++++ . .+.++..|..|+||||+||..+ +..+++++
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~----------------~--~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~ 190 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLT----------------E--KIPLANGHEPDETALHLAVRSVDRTSLHIVDF 190 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTT----------------S--BCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHH
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchh----------------h--hccccccccCCCCcchHHHHhcccchHHHHHH
Confidence 45689999999999999999999998742 0 1125677889999999999983 34569999
Q ss_pred HhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHHhhhcC
Q 005192 551 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 598 (709)
Q Consensus 551 Ll~~p~~vGi~A~vNarD~~G~TPLh~Aa~rG~~~iieLLl~k~~~~~ 598 (709)
|++++ |++|.+|.+|+||||+|+.+|+.+++++|++++++..
T Consensus 191 Ll~~g------a~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 232 (278)
T 1dcq_A 191 LVQNS------GNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 232 (278)
T ss_dssp HHHHC------SCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHCC------CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99885 7789999999999999999999999999999876643
No 115
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=61.65 E-value=29 Score=30.23 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=39.1
Q ss_pred cCceeeeeeeceeeecCCceEEEEEeccCCCCCceEEEEEcCceeeeee
Q 005192 260 HKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQET 308 (709)
Q Consensus 260 ~~~P~i~~V~P~av~ag~~~~~~v~G~nL~~p~~rllc~~~G~Yl~~e~ 308 (709)
+..=.|..++|-+-..+..+.++|.|.+|.. +.++.|.|.+.-..++.
T Consensus 4 ~~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~ 51 (95)
T 2cxk_A 4 GSSGMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASL 51 (95)
T ss_dssp -CCSCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEE
T ss_pred CCcEEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEE
Confidence 3445789999999999999999999999964 56899999886555554
No 116
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=57.73 E-value=25 Score=30.64 Aligned_cols=39 Identities=26% Similarity=0.244 Sum_probs=32.7
Q ss_pred CceeeeeeeceeeecCCceEEEEEeccCCCCCceE-EEEEcC
Q 005192 261 KSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRL-LCAIEG 301 (709)
Q Consensus 261 ~~P~i~~V~P~av~ag~~~~~~v~G~nL~~p~~rl-lc~~~G 301 (709)
-.|+|..++|..-..| +.+.++|+||......+ -+++.|
T Consensus 6 p~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg 45 (99)
T 1uad_C 6 QPPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICG 45 (99)
T ss_dssp CCCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETT
T ss_pred CCCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECC
Confidence 4699999999998665 99999999998876655 478877
No 117
>1pby_A Quinohemoprotein amine dehydrogenase 60 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jju_A*
Probab=32.54 E-value=72 Score=35.60 Aligned_cols=45 Identities=16% Similarity=0.265 Sum_probs=37.1
Q ss_pred ccccCceeeeeeeceeeecCCceEEEEEeccCCC-----CCceEEEEEcC
Q 005192 257 LKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSR-----STTRLLCAIEG 301 (709)
Q Consensus 257 ~~s~~~P~i~~V~P~av~ag~~~~~~v~G~nL~~-----p~~rllc~~~G 301 (709)
.+.+..|+|+.|.|-.+.+|.+++++|-|.+|.. ++.++.-+..+
T Consensus 270 ~~~~~~~~~~av~P~~l~aG~~~~~~i~G~gL~g~~~l~~gv~v~~~s~~ 319 (489)
T 1pby_A 270 VKADAAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESAG 319 (489)
T ss_dssp EETTCSSEEEEEESCEEETTCCEEEEEEEESCCSCEECCTTEEEEEEECC
T ss_pred eecCCCceEEEeChhhhcCCCceEEEEEecccccccccCCceEEEEecCC
Confidence 4556799999999999999999999999999975 56777744433
No 118
>1jmx_A Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jmz_A*
Probab=30.40 E-value=78 Score=35.41 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=30.1
Q ss_pred ccccCceeeeeeeceeeecCCceEEEEEeccCCC
Q 005192 257 LKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSR 290 (709)
Q Consensus 257 ~~s~~~P~i~~V~P~av~ag~~~~~~v~G~nL~~ 290 (709)
.+.. .|+|+.|.|-.+.+|.+++++|-|.+|..
T Consensus 279 ~~~~-~~~~~av~p~~~~ag~~~~~~i~G~gl~g 311 (494)
T 1jmx_A 279 VKEG-KARLLAVQPAFIKAGGESEITLVGSGLAG 311 (494)
T ss_dssp EETT-SCEEEEEESSEEETTCEEEEEEEEESCCS
T ss_pred eecC-CceEEEEChhhhcCCCceEEEEEeccccc
Confidence 4455 99999999999999999999999999975
Done!