BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005193
(709 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255562314|ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
gi|223538602|gb|EEF40205.1| DNA gyrase subunit B, putative [Ricinus communis]
Length = 732
Score = 1179 bits (3050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/703 (82%), Positives = 637/703 (90%), Gaps = 11/703 (1%)
Query: 17 MASRCFCSFSSSLF-FKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSK 75
+ + F S S L FKPR +F R V+S+V T N RAF+SSS ATE F+E+ SK
Sbjct: 31 LHCQSFSSLSRPLVSFKPRVSFQWRAVTSRV-TVQNAGSARAFMSSSTATEPFQESASSK 89
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YGS+QIQVL+GLE VRKRP MYIGSTGPRGLHHLVYEILDNA+DEAQAGYAS ++V L
Sbjct: 90 AYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHHLVYEILDNAIDEAQAGYASRVDVILH 149
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+DNS IP DLHP T KSALETVLTVLHAGGKFGGS+SGYSVSGGLHGVGLSV
Sbjct: 150 SDNSVSISDNGRGIPTDLHPVTKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSV 209
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEVTVWRDGMEY Q+YSRG PVT L CH L V+S+DRQGT +RFWPDK+VFTT
Sbjct: 210 VNALSEGLEVTVWRDGMEYRQRYSRGNPVTILMCHSLAVESRDRQGTCVRFWPDKEVFTT 269
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
AI+FD+NTIAGR+RELAFLNPKLTI L+KED+DPEKNQY+EYF+AGGL EYV+WLNTDKK
Sbjct: 270 AIEFDYNTIAGRVRELAFLNPKLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLNTDKK 329
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
PLHDVVGF K++DGITID+ALQWCSDAYSDT+LGYANSIRTIDGGTHI+G KASLTRTLN
Sbjct: 330 PLHDVVGFGKEIDGITIDMALQWCSDAYSDTILGYANSIRTIDGGTHIDGFKASLTRTLN 389
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
SLGKKSK +K+KDI+LSGEHVREGLTCI+SV+VP+PEFEGQTKTRLGNPEVRKVVDQSVQ
Sbjct: 390 SLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPSPEFEGQTKTRLGNPEVRKVVDQSVQ 449
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
EYLTEYLELHPDVLDSILSKSL+ALKAALAAK+AR+LVRQKSVLR+SSLPGKLADCSST
Sbjct: 450 EYLTEYLELHPDVLDSILSKSLNALKAALAAKKARELVRQKSVLRTSSLPGKLADCSSTN 509
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI L
Sbjct: 510 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGL 569
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF+RYQK LF+EGCIYVGVPPL
Sbjct: 570 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKALFEEGCIYVGVPPL 629
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKVERGKQV YCYD+AELKK++SSFP NA Y+IQRFKGLGEMMP+QLWETT++PEQR+LK
Sbjct: 630 YKVERGKQVYYCYDEAELKKLRSSFPQNASYNIQRFKGLGEMMPLQLWETTMDPEQRLLK 689
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
QLV+EDAAEANVVFSSLMGARVD RKELIQ++A VN+D LDI
Sbjct: 690 QLVVEDAAEANVVFSSLMGARVDVRKELIQSSARAVNIDLLDI 732
>gi|297739950|emb|CBI30132.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/708 (81%), Positives = 635/708 (89%), Gaps = 16/708 (2%)
Query: 17 MASRCFCS------FSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKE 70
MASR + SS LFFKPR F +R VS+ L R N PRAF+SSSIAT+AF+E
Sbjct: 1 MASRFYAHSSMHSLTSSVLFFKPRVGFQLRRVSNHFLIR-NAASPRAFMSSSIATDAFQE 59
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ SK YGSEQIQVLEGL+ VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS +
Sbjct: 60 STSSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKV 119
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
+V LLAD+S IP +LHP T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHG
Sbjct: 120 DVVLLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHG 179
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VGLSVVNALSE+LEVTVWRDGMEY QKYSRGKPVT+LT VLP +S D QGT IRFWPDK
Sbjct: 180 VGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDK 239
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
+VFTT IQFD+NTIAGRIRELAFLNP+L I LRKED DPEKNQYNEY +AGGL EYV+WL
Sbjct: 240 EVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWL 299
Query: 302 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
NTDKKP+HDVVGFRK DGI+ID+ALQWCSDAYSDTMLGYANSIRTIDGGTHI+G+KASL
Sbjct: 300 NTDKKPVHDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASL 359
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTLN+LGKKSK +K+KDI+LSGEHVREGLTC+ISV+VPNPEFEGQTKTRLGNPEVRKVV
Sbjct: 360 TRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVV 419
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
DQ+VQE+LTEYLELHPDVLD ILSKSL+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLAD
Sbjct: 420 DQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQKSVLKSSSLPGKLAD 479
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSST PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYK+EEIQN
Sbjct: 480 CSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKSEEIQN 539
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
LI LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYV
Sbjct: 540 LILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYV 599
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
GVPPL+KVERGKQV YCYDDAELK+++ S P NA YSIQRFKGLGEMMPVQLWETT++PE
Sbjct: 600 GVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQRFKGLGEMMPVQLWETTMDPE 659
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+R+LKQLV+EDAAEANVVFSSLMGARVD RKELIQ +A+ + LD LDI
Sbjct: 660 RRLLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSASTMKLDQLDI 707
>gi|225441215|ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 719
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/723 (80%), Positives = 638/723 (88%), Gaps = 23/723 (3%)
Query: 4 LLLKAPYLHIRVLMASRCFCSFSSSLFFKP--------RTNFAIRGVSSQVLTRSNVVLP 55
L L+ YL +R +MASR F S + R F +R VS+ L R N P
Sbjct: 3 LRLRPSYLPLR-MMASR----FESVIHVSDDCSCSSSFRVGFQLRRVSNHFLIR-NAASP 56
Query: 56 RAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEIL 115
RAF+SSSIAT+AF+E+ SK YGSEQIQVLEGL+ VRKRP MYIGSTG RGLHHLVYEIL
Sbjct: 57 RAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEIL 116
Query: 116 DNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKF 166
DNA+DEAQAG+AS ++V LLAD+S IP +LHP T KS+LETVLTVLHAGGKF
Sbjct: 117 DNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKF 176
Query: 167 GGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD 226
GG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGMEY QKYSRGKPVT+LT VLP +
Sbjct: 177 GGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTE 236
Query: 227 SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN 286
S D QGT IRFWPDK+VFTT IQFD+NTIAGRIRELAFLNP+L I LRKED DPEKNQYN
Sbjct: 237 STDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYN 296
Query: 287 EYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIR 346
EY +AGGL EYV+WLNTDKKP+HDVVGFRK DGI+ID+ALQWCSDAYSDTMLGYANSIR
Sbjct: 297 EYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIR 356
Query: 347 TIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEG 406
TIDGGTHI+G+KASLTRTLN+LGKKSK +K+KDI+LSGEHVREGLTC+ISV+VPNPEFEG
Sbjct: 357 TIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVISVKVPNPEFEG 416
Query: 407 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 466
QTKTRLGNPEVRKVVDQ+VQE+LTEYLELHPDVLD ILSKSL+ALKAALAAKRAR+LVRQ
Sbjct: 417 QTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQ 476
Query: 467 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE 526
KSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E
Sbjct: 477 KSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIE 536
Query: 527 RKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF 586
RKDEAAMYK+EEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF
Sbjct: 537 RKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF 596
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLG 646
+RYQ+ LFDEGCIYVGVPPL+KVERGKQV YCYDDAELK+++ S P NA YSIQRFKGLG
Sbjct: 597 FRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQRFKGLG 656
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDH 706
EMMPVQLWETT++PE+R+LKQLV+EDAAEANVVFSSLMGARVD RKELIQ +A+ + LD
Sbjct: 657 EMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSASTMKLDQ 716
Query: 707 LDI 709
LDI
Sbjct: 717 LDI 719
>gi|356504692|ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 726
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/727 (77%), Positives = 636/727 (87%), Gaps = 19/727 (2%)
Query: 1 MARLLLKAPYLHIRVLMASRC---------FCSFSSSLFFKPRTNFAIRGVSSQVLTRSN 51
MA +LL+ P L +RV+MASR SF SS K RT+F +R + + N
Sbjct: 1 MAHVLLRRPPL-LRVIMASRFITSSSFHMRLSSFPSSTLSKTRTSFPLRKFLAPCCSVPN 59
Query: 52 VVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLV 111
PRAF+SS ATEAF ++ S Y S+QIQVLEGL+ VRKRP MYIGSTGPRGLHHLV
Sbjct: 60 AFTPRAFMSSISATEAFLKSESSTAYSSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLV 119
Query: 112 YEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHA 162
YEILDN+VDEAQAG+AS I V L AD+S IP DLHP TNKSALETVLTVLHA
Sbjct: 120 YEILDNSVDEAQAGFASKIYVVLHADDSVSITDNGRGIPTDLHPVTNKSALETVLTVLHA 179
Query: 163 GGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHV 222
GGKFGG++SGYSVSGGLHGVGLSVVNALSESLE+TVWRDGMEY Q YSRGKPV+ L C V
Sbjct: 180 GGKFGGANSGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYMQTYSRGKPVSILKCLV 239
Query: 223 LPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEK 282
LP + KD +GTR+RFWPDK+VFTTAIQFDHNTIAGRIRELAFLNPKLTI LRKED+DPEK
Sbjct: 240 LPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKLTITLRKEDNDPEK 299
Query: 283 NQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYA 342
QYNEYF+AGGL EYV+WLNTDKK LHDV+ FRK+ DGIT+D+A QWC DAYSDT+LGYA
Sbjct: 300 VQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAFQWCEDAYSDTILGYA 359
Query: 343 NSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNP 402
NSIRTIDGGTHI+ +KAS+TRTLNSLGKKSK +K+KDI+LSGEHVREGLTC++SV+VPNP
Sbjct: 360 NSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNP 419
Query: 403 EFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARD 462
EFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAALAAKRAR+
Sbjct: 420 EFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARE 479
Query: 463 LVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKI 522
LVRQKSVLRSSSLPGKLADCSST PEE EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKI
Sbjct: 480 LVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKI 539
Query: 523 LNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL 582
LN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILTDADVDGAHIRTLL
Sbjct: 540 LNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLL 599
Query: 583 LTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRF 642
LTFF+RYQ+ LFDEGCIYVGVPPLYKV RGKQV YCYDDA+LKK++ SFP+NA Y++QRF
Sbjct: 600 LTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLQRSFPANASYNMQRF 659
Query: 643 KGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
KGLGEMMP+QLWETT++PE+R+LKQL +EDAAEAN+VFSSLMG RVD RKELI+N+A+L+
Sbjct: 660 KGLGEMMPLQLWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTRVDVRKELIRNSASLI 719
Query: 703 NLDHLDI 709
+L LDI
Sbjct: 720 DLHQLDI 726
>gi|75288399|sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|38017095|gb|AAR07943.1| DNA gyrase B subunit [Nicotiana benthamiana]
Length = 731
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/730 (80%), Positives = 642/730 (87%), Gaps = 25/730 (3%)
Query: 4 LLLKAPYLHIRVLMASRCFC---------SFSS------SLFFKPRTNFAIRGVSSQVLT 48
LL P H MASR SFSS S+ PR +R +S +L
Sbjct: 3 LLKPFPLQHSLRCMASRFLLHSHYHTHTLSFSSISLSRPSIVLNPRVINKLRRLSDAILI 62
Query: 49 RSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLH 108
R N+V RAF+SSS TEAF+EN SK YGSEQIQVLEGL+ VRKRP MYIGSTGPRGLH
Sbjct: 63 R-NMVSLRAFMSSSTTTEAFQENTKSKGYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLH 121
Query: 109 HLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTV 159
HLVYEILDNAVDEAQAG+A+ I+V L ADNS IP +LHP T KS+LETVLTV
Sbjct: 122 HLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPVTKKSSLETVLTV 181
Query: 160 LHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLT 219
LHAGGKFGGSSSGY+VSGGLHGVGLSVVNALS++LEVT+WRDG EY QKYSRGKP+TTL
Sbjct: 182 LHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQKYSRGKPITTLI 241
Query: 220 CHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD 279
CH LPV+ +DRQGT IRFWPDK+VFTT +QFD+NTIAGRIRELAFLNP+LTIAL+KED D
Sbjct: 242 CHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNPELTIALKKEDID 301
Query: 280 PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTML 339
PEK Q NEYF+AGGL EYV+WLN DKKPLHDV+GFRK+ DGITID+ALQWCSDAYSDTML
Sbjct: 302 PEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTML 361
Query: 340 GYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRV 399
GYANSIRTIDGGTHI+GVKA+LTR LN+LGKKSKT+K+KDISLSGEHVREGLTC+ISV+V
Sbjct: 362 GYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHVREGLTCVISVKV 421
Query: 400 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKR 459
PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL+ALKAALAAKR
Sbjct: 422 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKR 481
Query: 460 ARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLR 519
AR+LVRQKSVL+SSSLPGKLADCS+T PEE+EIFIVEGDSAGGSAKQGRDRRFQAILPLR
Sbjct: 482 ARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLR 541
Query: 520 GKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIR 579
GKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIR
Sbjct: 542 GKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIR 601
Query: 580 TLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI 639
TLLLTFF+RYQ+ LF+EGCIYVGVPPLYKVERGKQV YCYDDAELKKV+ SFPSNA Y+I
Sbjct: 602 TLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYNI 661
Query: 640 QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
QRFKGLGEMMP QLWETT+NPE R+LKQLV+EDAAEANVVFSSLMG+RVD RK+LIQN+A
Sbjct: 662 QRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLIQNSA 721
Query: 700 NLVNLDHLDI 709
+++NL+ LDI
Sbjct: 722 SMMNLEQLDI 731
>gi|224139720|ref|XP_002323244.1| predicted protein [Populus trichocarpa]
gi|222867874|gb|EEF05005.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/691 (80%), Positives = 622/691 (90%), Gaps = 18/691 (2%)
Query: 28 SLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEG 87
S+ F R +F R V S+ L + N V PRAF+S+S+ATE+ +E+ SK YGS+QIQVL+G
Sbjct: 19 SVSFNSRVSFPARRVPSRFLVQ-NGVSPRAFMSTSVATESQQESAGSKAYGSDQIQVLKG 77
Query: 88 LEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS-------- 139
LE VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS I V L +DNS
Sbjct: 78 LEPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASTINVVLHSDNSVSITDNGR 137
Query: 140 -IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV 198
IP DLHP T KSALETVLTVLHAGGKFGGS+SGY VSGGLHGVGLSVVNALSE LEVTV
Sbjct: 138 GIPTDLHPETKKSALETVLTVLHAGGKFGGSNSGYRVSGGLHGVGLSVVNALSEELEVTV 197
Query: 199 WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGR 258
WRDG +Y QKYSRG PVTTLTCH LPV+SK+R+GT I+FWPDK+VFTT IQFD++TIAGR
Sbjct: 198 WRDGKQYQQKYSRGNPVTTLTCHELPVESKERRGTHIKFWPDKEVFTTEIQFDYHTIAGR 257
Query: 259 IRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV 318
+RELAFLNPK D+DPEKNQ++E+F+AGGL EYV WLNTDKKPLHDV+GFRK+V
Sbjct: 258 VRELAFLNPK--------DNDPEKNQFDEHFYAGGLVEYVNWLNTDKKPLHDVLGFRKEV 309
Query: 319 DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK 378
DGI ID+ALQWCSDAYSDT+LGYANSIRT+DGGTHI+G KASLTRTLN+LGKKSK +KDK
Sbjct: 310 DGIAIDMALQWCSDAYSDTILGYANSIRTVDGGTHIDGAKASLTRTLNNLGKKSKVIKDK 369
Query: 379 DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 438
D+SLSGEHVREGLTCIISV+VP+PEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPD
Sbjct: 370 DMSLSGEHVREGLTCIISVKVPSPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPD 429
Query: 439 VLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 498
LDSILSKSL+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGD
Sbjct: 430 ALDSILSKSLNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGD 489
Query: 499 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE 558
SAGGSAKQGRDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+
Sbjct: 490 SAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKD 549
Query: 559 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 618
ALRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQ YC
Sbjct: 550 ALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAYYC 609
Query: 619 YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 678
+DDAELKK++ SFP NA Y+IQRFKGLGEMMP QLWETT++PE+R+LKQLV+EDAAEAN+
Sbjct: 610 FDDAELKKIQRSFPQNASYNIQRFKGLGEMMPAQLWETTMDPERRVLKQLVVEDAAEANI 669
Query: 679 VFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
VFSSLMG RVD RKELIQNAA+++N+DHLDI
Sbjct: 670 VFSSLMGTRVDFRKELIQNAASMINVDHLDI 700
>gi|356571931|ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 724
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/697 (79%), Positives = 617/697 (88%), Gaps = 10/697 (1%)
Query: 22 FCSFSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQ 81
SF SS K RT+F +R + + N V PRAF+SS TEAF + Y S+Q
Sbjct: 29 LSSFPSSTLSKTRTSFPLRKFWAPC-SVPNAVTPRAFMSSISTTEAFHNSESPTAYSSDQ 87
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS-- 139
IQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V LLAD+S
Sbjct: 88 IQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLLADDSVS 147
Query: 140 -------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 192
IP DLHP TNKSALETVLTVLHAGGKFGG++SGYSVSGGLHGVGLSVVNALSE
Sbjct: 148 ITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSE 207
Query: 193 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDH 252
LE+TVWRDGMEY Q YSRGKPV+ L C VLP + KD +GTR+RFWPDK+VFTTAIQFDH
Sbjct: 208 LLEITVWRDGMEYMQTYSRGKPVSILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDH 267
Query: 253 NTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV 312
NTIAGRIRELAFLNPKLTI RKED+DPEK QYNEYF+AGGL EYV+WLNTDKK LHDV+
Sbjct: 268 NTIAGRIRELAFLNPKLTITFRKEDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVL 327
Query: 313 GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 372
FRK+ DGIT+D+A QW DAYSDT+LGYANSIRTIDGGTHI+ +KAS+TRTLNSLGKKS
Sbjct: 328 SFRKETDGITVDIAFQWSEDAYSDTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKS 387
Query: 373 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 432
K +K+KDI+LSGEHVREGLTC++SV+VPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEY
Sbjct: 388 KVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEY 447
Query: 433 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 492
LELHPDVLDS+LSK+L+A KAALAAKRAR+LVRQKSVLRSSSLPGKLADCSST PEE EI
Sbjct: 448 LELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEI 507
Query: 493 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG 552
FIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKG
Sbjct: 508 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKG 567
Query: 553 EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 612
EDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKV RG
Sbjct: 568 EDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRG 627
Query: 613 KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 672
KQV YCYDDA+LKK++ SFP NA Y++QRFKGLGEMMP+QLWETT++PE+R+LKQL +ED
Sbjct: 628 KQVHYCYDDADLKKLQRSFPPNASYNMQRFKGLGEMMPLQLWETTMDPERRLLKQLKVED 687
Query: 673 AAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
AAEAN+VFSSLMG RVD RKELI+N+A++++LD LDI
Sbjct: 688 AAEANIVFSSLMGTRVDFRKELIRNSASMIDLDQLDI 724
>gi|224086827|ref|XP_002307976.1| predicted protein [Populus trichocarpa]
gi|222853952|gb|EEE91499.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/653 (83%), Positives = 600/653 (91%), Gaps = 9/653 (1%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ KE+ SK YGS+QIQVL+GLE VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAG
Sbjct: 1 ESQKESASSKAYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAG 60
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
YAS I V L +DNSI P DLH T KSALETVLTVLHAGGKFGGS+SGYSVS
Sbjct: 61 YASKINVVLHSDNSISITDNGRGIPTDLHQVTKKSALETVLTVLHAGGKFGGSNSGYSVS 120
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVGLSVVNALSE LEVTVWRDG EY QKYSRG PVTTL C+ L +SKD++GTRIR
Sbjct: 121 GGLHGVGLSVVNALSEELEVTVWRDGKEYQQKYSRGNPVTTLMCYELSAESKDQKGTRIR 180
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
FWPDK+VFTT IQFD+NT+ GR+RELAFLNPKL I+L+KED+DPEKNQY+E+F+AGGL E
Sbjct: 181 FWPDKEVFTTEIQFDYNTVGGRVRELAFLNPKLAISLKKEDNDPEKNQYDEHFYAGGLIE 240
Query: 297 YVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
YV WLNTDKK LHDVV FRK+VDGI ID+ALQWCSDAYSDT+LGYANSIRT+DGGTHI+G
Sbjct: 241 YVNWLNTDKKSLHDVVSFRKEVDGIAIDMALQWCSDAYSDTILGYANSIRTVDGGTHIDG 300
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
VKASLTRTLN+ GKKSK +KDKDISLSGEHVREGLTCIISV+VP+PEFEGQTKTRLGNPE
Sbjct: 301 VKASLTRTLNNFGKKSKVIKDKDISLSGEHVREGLTCIISVKVPSPEFEGQTKTRLGNPE 360
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VRKVV+QSVQEYLTEYLELHPDVLDSILSKSL+ALKAALAAKRAR+LVRQKSVL+SSSLP
Sbjct: 361 VRKVVEQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRARELVRQKSVLKSSSLP 420
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ER+DE AMYKN
Sbjct: 421 GKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEEAMYKN 480
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EEIQNLI ALGLGVKGEDFKK+ALRYH+IIILTDADVDGAHIRTLLLTFF+RYQ+ LFDE
Sbjct: 481 EEIQNLILALGLGVKGEDFKKDALRYHRIIILTDADVDGAHIRTLLLTFFFRYQRALFDE 540
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
GCIYVGVPPLYKVERGKQV YC+DDAEL+KV+SSFP NA Y++QRFKGLGEMMP QLWET
Sbjct: 541 GCIYVGVPPLYKVERGKQVYYCFDDAELRKVQSSFPQNASYNMQRFKGLGEMMPAQLWET 600
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
T++PEQR+LKQLV+EDAAEA+VVFSSLMG RVD RKELIQ AA ++N+DHLDI
Sbjct: 601 TMDPEQRLLKQLVVEDAAEASVVFSSLMGTRVDGRKELIQKAARMINVDHLDI 653
>gi|297810505|ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
gi|297318973|gb|EFH49395.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
Length = 729
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/733 (76%), Positives = 626/733 (85%), Gaps = 33/733 (4%)
Query: 4 LLLKAPYLHIRVLMASR--CFCSFSSSLFFK----------------PRTNFAIRGVSSQ 45
LL +A YL +R LMASR F S S F + R F V +Q
Sbjct: 3 LLQRASYLRLR-LMASRPRLFSSSLSPAFHRHSSFLSSPPFSSPSPSFRLKFQFTNVLNQ 61
Query: 46 VLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPR 105
L + N V R FLS TEA +E SK Y SEQIQVLEGL+ VRKRP MYIGSTGPR
Sbjct: 62 RLIQRNAVSSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRKRPGMYIGSTGPR 116
Query: 106 GLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETV 156
GLHHLVYEILDNA+DEAQAG+AS ++V L AD S IP DLHPAT KS+LETV
Sbjct: 117 GLHHLVYEILDNAIDEAQAGFASKVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETV 176
Query: 157 LTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 216
LTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGME+ Q YSRGKP+T
Sbjct: 177 LTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEHKQNYSRGKPIT 236
Query: 217 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 276
TLTC VL ++S+ +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+KE
Sbjct: 237 TLTCRVLTLESERTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKE 296
Query: 277 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSD 336
D DPEKNQY+EY+FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYSD
Sbjct: 297 DDDPEKNQYSEYYFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSD 356
Query: 337 TMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIIS 396
TMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+S
Sbjct: 357 TMLGYANSIRTIDGGTHIEGVKASLTRTLNALAKKSKTVKEKDISLSGEHVREGLTCIVS 416
Query: 397 VRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALA 456
V++PNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPDVL+SI+SKSL+A KAALA
Sbjct: 417 VKIPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDVLESIVSKSLNAYKAALA 476
Query: 457 AKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAIL 516
AKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQAIL
Sbjct: 477 AKRARELVRSKSVLKSSSLPGKLADCSSTDPEASEIFIVEGDSAGGSAKQGRDRRFQAIL 536
Query: 517 PLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGA 576
PLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHKIIILTDADVDGA
Sbjct: 537 PLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGA 596
Query: 577 HIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL 636
HIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK YCYDDA+LKK+ S+FP+NA
Sbjct: 597 HIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKHAHYCYDDADLKKITSNFPANAS 656
Query: 637 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLMGARVD RKELI+
Sbjct: 657 YNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIK 716
Query: 697 NAANLVNLDHLDI 709
NAA +NL LDI
Sbjct: 717 NAATRINLQRLDI 729
>gi|18414465|ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA gyrase subunit B, mitochondrial; Flags: Precursor
gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13 [Arabidopsis thaliana]
gi|22655426|gb|AAM98305.1| At3g10270/F14P13_13 [Arabidopsis thaliana]
gi|332003319|gb|AED90702.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 732
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/685 (80%), Positives = 608/685 (88%), Gaps = 14/685 (2%)
Query: 34 RTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRK 93
R F + V SQ L + N + R FLS TEA +E SK Y SEQIQVLEGL+ VRK
Sbjct: 53 RLKFQLTSVLSQRLIQRNAISSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRK 107
Query: 94 RPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDL 144
RP MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD S IP DL
Sbjct: 108 RPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDL 167
Query: 145 HPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGME 204
HPAT KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME
Sbjct: 168 HPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGME 227
Query: 205 YHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 264
+ Q YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAF
Sbjct: 228 HKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAF 287
Query: 265 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 324
LNPK+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D
Sbjct: 288 LNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVD 347
Query: 325 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 384
+ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSG
Sbjct: 348 VALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSG 407
Query: 385 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 444
EHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+
Sbjct: 408 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESII 467
Query: 445 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 504
SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSA
Sbjct: 468 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSA 527
Query: 505 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 564
KQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHK
Sbjct: 528 KQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHK 587
Query: 565 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 624
IIILTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK QYCYDDA+L
Sbjct: 588 IIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADL 647
Query: 625 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 684
KK+ S+FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLM
Sbjct: 648 KKITSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLM 707
Query: 685 GARVDTRKELIQNAANLVNLDHLDI 709
GARVD RKELI+NAA +NL LDI
Sbjct: 708 GARVDVRKELIKNAATRINLQRLDI 732
>gi|449453173|ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/717 (78%), Positives = 621/717 (86%), Gaps = 27/717 (3%)
Query: 11 LHIRVLMASRCFCSFSSSLFFKPRTNF-AIRG-------VSSQVLTRSNV-VLPRAFLSS 61
+H+R L SSS F PR +F +RG +S+ + N V +AF+SS
Sbjct: 12 IHLRFL---------SSSASFAPRFSFLQLRGARFRTMKISTSIRLVPNAEVSSKAFMSS 62
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S ATE + SK YGSEQIQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDE
Sbjct: 63 SAATETSTRSESSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDE 122
Query: 122 AQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
AQAG+AS I+V L ADNS IP DLHP T KS+LETVLTVLHAGGKFGGSSSG
Sbjct: 123 AQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGSSSG 182
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
YSVSGGLHGVGLSVVNALSESLEV++WRDG E+HQKYSRGKP + LT HV + K+ QG
Sbjct: 183 YSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPASILTSHVPSSELKNHQG 242
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 292
T IRFWPDK+VFTT IQFD+NTI+GRIRELAFLNPKLTI L KED+D EKNQYNEY +AG
Sbjct: 243 THIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTITLTKEDNDLEKNQYNEYCYAG 302
Query: 293 GLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
GL EYV WLN+DK P+H+V GFRK+ DG+ ID+ALQWC+DAYSDT+LGYANSIRTIDGGT
Sbjct: 303 GLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTIDGGT 362
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HI+G+KASLTRTLN+LGKKSK KDKDISLSGEHVREGLTC++SVRV NPEFEGQTKTRL
Sbjct: 363 HIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTKTRL 422
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GNPEVRKVV+QS+QEYLTEYLELHPDVL+ ILSKSL+ALKAALAAKRAR+LVRQKSVLRS
Sbjct: 423 GNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAALAAKRARELVRQKSVLRS 482
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
SSLPGKLADCSS PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAA
Sbjct: 483 SSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAA 542
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
MYKNEEI NLIRALGLG KGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFF+RYQK
Sbjct: 543 MYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 602
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
LFDEGCIYVGVPPLYKVERGKQV YCYDD ELKKV+SSFPSNA Y+IQRFKGLGEMMP Q
Sbjct: 603 LFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 662
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RKELIQ +A+ +NL+HLDI
Sbjct: 663 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHLDI 719
>gi|449488224|ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/714 (78%), Positives = 619/714 (86%), Gaps = 21/714 (2%)
Query: 11 LHIRVLMASRC------FCSFSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIA 64
+H+R L +S F S + F + + +IR L + V +AF+SSS A
Sbjct: 12 IHLRFLSSSASVAPRFSFLQLSGARFRTMKISTSIR------LVPNAEVSSKAFMSSSAA 65
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE + SK YGSEQIQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQA
Sbjct: 66 TETSTGSESSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQA 125
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+AS I+V L ADNS IP DLHP T KS+LETVLTVLHAGGKFGGSSSGYSV
Sbjct: 126 GFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGSSSGYSV 185
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVGLSVVNALSESLEV++WRDG E+HQKYSRGKP + LT HV + K+ QGT I
Sbjct: 186 SGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPTSILTSHVPSSELKNHQGTHI 245
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
RFWPDK+VFTT IQFD+NTI+GRIRELAFLNPKLTIAL KED+D EKNQYNEY +AGGL
Sbjct: 246 RFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTIALTKEDNDLEKNQYNEYCYAGGLV 305
Query: 296 EYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
EYV WLN+DK P+H+V GFRK+ DG+ ID+ALQWC+DAYSDT+LGYANSIRTIDGGTHI+
Sbjct: 306 EYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTIDGGTHID 365
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G+KASLTRTLN+LGKKSK KDKDISLSGEHVREGLTC++SVRV NPEFEGQTKTRLGNP
Sbjct: 366 GMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTKTRLGNP 425
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVRKVV+QS+QEYLTEYLELHPDVL+ ILSKSL+ALKAALAAKRAR+LVRQKSVLRSSSL
Sbjct: 426 EVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAALAAKRARELVRQKSVLRSSSL 485
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYK
Sbjct: 486 PGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYK 545
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
NEEI NLIRALGLG KGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFF+RYQK LFD
Sbjct: 546 NEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKALFD 605
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
EGCIYVGVPPLYKVERGKQV YCYDD ELKKV+SSFPSNA Y+IQRFKGLGEMMP QLWE
Sbjct: 606 EGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQLWE 665
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
TT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RKELIQ +A+ +NL+HLDI
Sbjct: 666 TTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHLDI 719
>gi|9955568|emb|CAC05495.1| DNA gyrase subunit B-like protein [Arabidopsis thaliana]
Length = 760
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/715 (76%), Positives = 608/715 (85%), Gaps = 44/715 (6%)
Query: 34 RTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRK 93
R F + V SQ L + N + R FLS TEA +E SK Y SEQIQVLEGL+ VRK
Sbjct: 51 RLKFQLTSVLSQRLIQRNAISSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRK 105
Query: 94 RPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDL 144
RP MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD S IP DL
Sbjct: 106 RPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDL 165
Query: 145 HPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGME 204
HPAT KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME
Sbjct: 166 HPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGME 225
Query: 205 YHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---------------------- 242
+ Q YSRGKP+TTLTC VLP++SK +GT IRFWPDK+
Sbjct: 226 HKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEGFACFPLLTTLPKPKLDLMINF 285
Query: 243 --------VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGL 294
VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+KED DPEK QY+EY FAGGL
Sbjct: 286 PLWNELFSVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKTQYSEYSFAGGL 345
Query: 295 EEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYSDTMLGYANSIRTIDGGTHI
Sbjct: 346 TEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTIDGGTHI 405
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
EGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLGN
Sbjct: 406 EGVKASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGN 465
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
PEVRK+VDQSVQEYLTE+LELHPD+L+SI+SKSL+A KAALAAKRAR+LVR KSVL+SSS
Sbjct: 466 PEVRKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAALAAKRARELVRSKSVLKSSS 525
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMY
Sbjct: 526 LPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMY 585
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
KNEEIQNLI LGLGVKGEDFKKE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LF
Sbjct: 586 KNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALF 645
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
D GCIYVGVPPL+KVERGK QYCYDDA+LKK+ S+FP+NA Y+IQRFKGLGEMMP QLW
Sbjct: 646 DAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQLW 705
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
ETT+NPE R+LKQLV++D AEAN+ FSSLMGARVD RKELI+NAA +NL LDI
Sbjct: 706 ETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 760
>gi|378405244|sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chloroplastic; Flags: Precursor
Length = 730
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/686 (79%), Positives = 612/686 (89%), Gaps = 11/686 (1%)
Query: 33 PRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVR 92
PR F + V SQ L + N V P++F+SS++ E+ +E+ SK Y SE IQVLEGL+ VR
Sbjct: 47 PRIKFQLANVFSQRLVQRNAVSPKSFMSSTM--ESLQESSTSKDYSSEHIQVLEGLDPVR 104
Query: 93 KRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPID 143
KRP MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+S IP D
Sbjct: 105 KRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTD 164
Query: 144 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 203
LHPAT KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGM
Sbjct: 165 LHPATGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGM 224
Query: 204 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 263
E+ QKYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELA
Sbjct: 225 EFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELA 284
Query: 264 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 323
FLNPK+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+
Sbjct: 285 FLNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTV 344
Query: 324 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 383
D++LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLS
Sbjct: 345 DVSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLS 404
Query: 384 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 443
GEHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI
Sbjct: 405 GEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESI 464
Query: 444 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 503
+SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGS
Sbjct: 465 ISKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGS 524
Query: 504 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 563
AKQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYH
Sbjct: 525 AKQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYH 584
Query: 564 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 623
KIIILTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA
Sbjct: 585 KIIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAA 644
Query: 624 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 683
LKK+ +SFP NA Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV++DAAE N+VFSSL
Sbjct: 645 LKKITASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSL 704
Query: 684 MGARVDTRKELIQNAANLVNLDHLDI 709
MGARVD RKELI++AA +NL++LDI
Sbjct: 705 MGARVDVRKELIKSAATRMNLENLDI 730
>gi|334185208|ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332641361|gb|AEE74882.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 772
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/718 (76%), Positives = 612/718 (85%), Gaps = 43/718 (5%)
Query: 33 PRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVR 92
PR F + V SQ L + N V P++F+SS++ E+ +E+ SK Y SE IQVLEGL+ VR
Sbjct: 57 PRIKFQLANVFSQRLVQRNAVSPKSFMSSTM--ESLQESSTSKDYSSEHIQVLEGLDPVR 114
Query: 93 KRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPID 143
KRP MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+S IP D
Sbjct: 115 KRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTD 174
Query: 144 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 203
LHPAT KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGM
Sbjct: 175 LHPATGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGM 234
Query: 204 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 263
E+ QKYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELA
Sbjct: 235 EFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELA 294
Query: 264 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 323
FLNPK+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+
Sbjct: 295 FLNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTV 354
Query: 324 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK------- 376
D++LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K
Sbjct: 355 DVSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKVKGYIIY 414
Query: 377 -------------------------DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTR
Sbjct: 415 SSPWIETKFKYSSALKRHALRTINNEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTR 474
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+
Sbjct: 475 LGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLK 534
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
SSSLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEA
Sbjct: 535 SSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEA 594
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
AMYKNEEIQNLI LGLGVKGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+
Sbjct: 595 AMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQR 654
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 651
LFD GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP NA Y+IQRFKGLGEMMP
Sbjct: 655 ALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPA 714
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
QLWETT+NP+ R+LKQLV++DAAE N+VFSSLMGARVD RKELI++AA +NL++LDI
Sbjct: 715 QLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 772
>gi|297833810|ref|XP_002884787.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
gi|297330627|gb|EFH61046.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/656 (81%), Positives = 593/656 (90%), Gaps = 12/656 (1%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ +E+ SK Y SE IQVLEGL+ VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAG
Sbjct: 2 ESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAG 61
Query: 126 YASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+AS I+V L +D+S IP DLHPAT KSALETVLTVLHAGGKFGG SSGYSVS
Sbjct: 62 FASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKSALETVLTVLHAGGKFGGKSSGYSVS 121
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPVTTLTCHVLP +S+ QGT IR
Sbjct: 122 GGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIR 181
Query: 237 FWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
FWPDK+ +FTTAIQFDHNTIAGRIRELAFLNPK+TI+L+KED DPE++ Y+EYF+AGG
Sbjct: 182 FWPDKEGFALFTTAIQFDHNTIAGRIRELAFLNPKVTISLKKEDDDPERDLYSEYFYAGG 241
Query: 294 LEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 353
L EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSDAYSDTMLGYANSIRTIDGGTH
Sbjct: 242 LTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYSDTMLGYANSIRTIDGGTH 301
Query: 354 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
IEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLG
Sbjct: 302 IEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLG 361
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
NPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+SS
Sbjct: 362 NPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSS 421
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
SLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAM
Sbjct: 422 SLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAM 481
Query: 534 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
YKNEEIQNLI LGLGVKGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ L
Sbjct: 482 YKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRAL 541
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 653
FD GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP+NA Y+IQRFKGLGEMMP QL
Sbjct: 542 FDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPANASYNIQRFKGLGEMMPAQL 601
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
WETT+NP+ R+LKQLV+EDAAE N+VFSSLMGARVD RKELI++AA +NL++LDI
Sbjct: 602 WETTMNPDTRILKQLVVEDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 657
>gi|6056198|gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/656 (81%), Positives = 592/656 (90%), Gaps = 12/656 (1%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ +E+ SK Y SE IQVLEGL+ VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAG
Sbjct: 2 ESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAG 61
Query: 126 YASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+AS I+V L +D+S IP DLHPAT KS+LETVLTVLHAGGKFGG SSGYSVS
Sbjct: 62 FASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKSSLETVLTVLHAGGKFGGKSSGYSVS 121
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPVTTLTCHVLP +S+ QGT IR
Sbjct: 122 GGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIR 181
Query: 237 FWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
FWPDK+ +FTTAIQFDHNTIAGRIRELAFLNPK+TI+L+KED DPE++ Y+EYF+AGG
Sbjct: 182 FWPDKEGFALFTTAIQFDHNTIAGRIRELAFLNPKVTISLKKEDDDPERDVYSEYFYAGG 241
Query: 294 LEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 353
L EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSDAYSDTMLGYANSIRTIDGGTH
Sbjct: 242 LTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYSDTMLGYANSIRTIDGGTH 301
Query: 354 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
IEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLG
Sbjct: 302 IEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLG 361
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
NPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+SS
Sbjct: 362 NPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSS 421
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
SLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAM
Sbjct: 422 SLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAM 481
Query: 534 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
YKNEEIQNLI LGLGVKGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ L
Sbjct: 482 YKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRAL 541
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 653
FD GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP NA Y+IQRFKGLGEMMP QL
Sbjct: 542 FDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQL 601
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
WETT+NP+ R+LKQLV++DAAE N+VFSSLMGARVD RKELI++AA +NL++LDI
Sbjct: 602 WETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 657
>gi|326518120|dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/693 (74%), Positives = 599/693 (86%), Gaps = 17/693 (2%)
Query: 26 SSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVL 85
S+ L F+PR V++ V R+ V + RAF++S+ A++A +E V+ Y + +QVL
Sbjct: 38 SARLPFRPRV------VAAAVPGRNGVAV-RAFMASTAASDAMQEKRVAGEYTAANVQVL 90
Query: 86 EGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS------ 139
E L+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAGYA+ I V L DNS
Sbjct: 91 EALDGVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGYATEINVVLHDDNSVSVTDN 150
Query: 140 ---IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEV 196
IP D+HP T KS +ETVLT++HAGGKFGGS+S YSV+GGLHGVGLSVVNALSE+LEV
Sbjct: 151 GRGIPTDIHPQTKKSCVETVLTLMHAGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALEV 210
Query: 197 TVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIA 256
TV RDG EY Q YSRGKP+T L+ LP +S RQG+ IRFWPDK++FTT I+FD +TI+
Sbjct: 211 TVCRDGKEYRQHYSRGKPLTMLSSTTLPDESSSRQGSCIRFWPDKEIFTTTIEFDFSTIS 270
Query: 257 GRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK 316
RIRELAFLNP+LTI L KE+ D + Q+NEY +AGGL EYV WLNTDKKPLHD + FRK
Sbjct: 271 SRIRELAFLNPELTITLTKEEQDAQV-QHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRK 329
Query: 317 DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK 376
++DGI +D++LQWCSD+YSDT+LGYANSIRTIDGGTHIEG+K SLTRT+N+ KKSK +K
Sbjct: 330 ELDGIIVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHIEGLKTSLTRTINNFAKKSKIMK 389
Query: 377 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 436
DKDISLSGEHVREG+TCIISV+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELH
Sbjct: 390 DKDISLSGEHVREGMTCIISVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELH 449
Query: 437 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 496
PDVLDSILSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ P E EIFIVE
Sbjct: 450 PDVLDSILSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSNPAECEIFIVE 509
Query: 497 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFK 556
GDSAGGSAKQGRDR+FQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFK
Sbjct: 510 GDSAGGSAKQGRDRKFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFK 569
Query: 557 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 616
KEALRYHKI+ILTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQV
Sbjct: 570 KEALRYHKIVILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVH 629
Query: 617 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 676
YCYD+A+LK + ++FP+NA Y+ QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDA EA
Sbjct: 630 YCYDEADLKDLVNTFPTNASYNTQRFKGLGEMMPLQLWETTMDPERRLLKQLTVEDAVEA 689
Query: 677 NVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NVVFSSLMGARV+ RKELIQ AA++VNLDHLDI
Sbjct: 690 NVVFSSLMGARVEYRKELIQKAASIVNLDHLDI 722
>gi|357130405|ref|XP_003566839.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
Length = 723
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/668 (76%), Positives = 583/668 (87%), Gaps = 10/668 (1%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHL 110
N V RAF++S+ A+EA +E P S Y + +QVLE L+ VRKRP MYIGSTGPRGLHHL
Sbjct: 57 NGVSVRAFMASTAASEAMQEKPASGEYTAANVQVLEALDGVRKRPGMYIGSTGPRGLHHL 116
Query: 111 VYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLH 161
VYEILDNAVDEAQAGYA+ I V L DNS IP D+HP T KS +ETVLT++H
Sbjct: 117 VYEILDNAVDEAQAGYATKINVVLHDDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMH 176
Query: 162 AGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCH 221
AGGKFGGS+S YSV+GGLHGVGLSVVNALSE+L+VTV+RDG EY Q YSRGKP+TTL+
Sbjct: 177 AGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALDVTVYRDGKEYRQSYSRGKPLTTLSST 236
Query: 222 VLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE 281
+ +S RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L KE+ D E
Sbjct: 237 TVYGESSTRQGTCIRFWPDKDIFTTTIGFDFNTISSRIRELAFLNPELTITLTKEEDDAE 296
Query: 282 KNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGY 341
+NEY +AGGL EYV WLNTDKKPLHD + FRK++DGI +D++LQWCSD+YSDT+LGY
Sbjct: 297 V-LHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYSDTVLGY 355
Query: 342 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 401
ANSIRTIDGGTHIEG+K SLTRT+NS K SK +KDKDISLSGEHVREG+TCII+V+VPN
Sbjct: 356 ANSIRTIDGGTHIEGLKTSLTRTVNSFAKNSKAIKDKDISLSGEHVREGMTCIIAVKVPN 415
Query: 402 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 461
PEFEGQTKTRLGNPEVRK+V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAALAAKRAR
Sbjct: 416 PEFEGQTKTRLGNPEVRKIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRAR 475
Query: 462 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 521
+LVR KSVL+SSSLPGKLADC+S+ P ESEIFIVEGDSAGGSAKQGRDR+FQAILPLRGK
Sbjct: 476 ELVRTKSVLKSSSLPGKLADCASSNPAESEIFIVEGDSAGGSAKQGRDRKFQAILPLRGK 535
Query: 522 ILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 581
ILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL
Sbjct: 536 ILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 595
Query: 582 LLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQR 641
LLTFF+RYQ+ LFDEGCIYVGVPPLYK+ERGKQ YCYD+A+LK++ ++FP+NA Y+ QR
Sbjct: 596 LLTFFFRYQRALFDEGCIYVGVPPLYKIERGKQAHYCYDEADLKELVNTFPTNASYNTQR 655
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
FKGLGEMMPVQLWETT++P +R+LKQL +EDAAEANVVFSSLMG+RVD RKELIQ AA +
Sbjct: 656 FKGLGEMMPVQLWETTMDPARRLLKQLTVEDAAEANVVFSSLMGSRVDYRKELIQKAAGM 715
Query: 702 VNLDHLDI 709
VNL+HLDI
Sbjct: 716 VNLEHLDI 723
>gi|242052563|ref|XP_002455427.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
gi|241927402|gb|EES00547.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
Length = 729
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/668 (75%), Positives = 583/668 (87%), Gaps = 11/668 (1%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHL 110
N V RAF++S+ A+EA E V+ Y + +QVLE L+ VR RP MYIGSTGPRGLHHL
Sbjct: 64 NGVPVRAFMASTTASEAMHEKRVAAEYTAANVQVLEALDGVRTRPGMYIGSTGPRGLHHL 123
Query: 111 VYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLH 161
VYEILDNAVDE QAG+AS I+V L DNS IP D+HP T KS +ETVLT++H
Sbjct: 124 VYEILDNAVDEGQAGHASKIDVVLHDDNSVSVTDNGRGIPTDMHPQTKKSCVETVLTLMH 183
Query: 162 AGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCH 221
AGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG +Y Q YSRGKP T L+
Sbjct: 184 AGGKFGGSKSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGNKYRQSYSRGKPTTPLSSI 243
Query: 222 VLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE 281
L ++ RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L KE+
Sbjct: 244 TLTGETSPRQGTSIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNPELTITLTKEEG--H 301
Query: 282 KNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGY 341
Q+NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+D++LQW SD+YSDT+LGY
Sbjct: 302 TVQHNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSLQWSSDSYSDTVLGY 361
Query: 342 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 401
ANSIRTIDGGTHI+G+KASLTRT+N+ KKSKT+KDKDI+LSGEHVREG+TC+ISV+VP+
Sbjct: 362 ANSIRTIDGGTHIDGLKASLTRTINNFAKKSKTIKDKDITLSGEHVREGMTCVISVKVPS 421
Query: 402 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 461
PEFEGQTKTRLGNPEVR++V+Q+VQE LTEYLELHPDVLDSILSKSL+ALKA+LAAKRAR
Sbjct: 422 PEFEGQTKTRLGNPEVRRIVEQAVQENLTEYLELHPDVLDSILSKSLNALKASLAAKRAR 481
Query: 462 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 521
+LVR KSVL+SSS+PGKLADC+ST PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
Sbjct: 482 ELVRSKSVLKSSSIPGKLADCASTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 541
Query: 522 ILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 581
ILN+ER+DEAAMYKNEEIQNLI ALGLGVKGEDFKKEALRYHKI+ILTDADVDGAHIRTL
Sbjct: 542 ILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVILTDADVDGAHIRTL 601
Query: 582 LLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQR 641
LLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++ ++FP NA Y IQR
Sbjct: 602 LLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEIVNTFPPNASYHIQR 661
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
FKGLGEMMPVQLWETT++PE+R+LKQL +EDAAEANVVFSSLMG+RV+ RK+LIQ AA+
Sbjct: 662 FKGLGEMMPVQLWETTMDPERRLLKQLKVEDAAEANVVFSSLMGSRVEYRKQLIQEAAST 721
Query: 702 VNLDHLDI 709
+++D LDI
Sbjct: 722 ISMDQLDI 729
>gi|357509407|ref|XP_003624992.1| DNA gyrase subunit B [Medicago truncatula]
gi|355500007|gb|AES81210.1| DNA gyrase subunit B [Medicago truncatula]
Length = 839
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/800 (67%), Positives = 611/800 (76%), Gaps = 123/800 (15%)
Query: 32 KPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAV 91
KPR F++R S L SN V PRA++SS A E +N SK YGS+QIQVLEGL+ V
Sbjct: 41 KPRKRFSLRKFSVPSLV-SNGVTPRAYMSSLSAAEDIHKNDSSKAYGSDQIQVLEGLDPV 99
Query: 92 RKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPI 142
RKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L AD+S IP
Sbjct: 100 RKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPT 159
Query: 143 DLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDG 202
D+HP T KSALETVLT+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSE+LEVTVWR+G
Sbjct: 160 DMHPTTKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREG 219
Query: 203 MEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIREL 262
+EY Q YSRGKPVTTL C +LP ++KDRQGTRI+FWPDK+VFTTAI+F++NTIAGRIREL
Sbjct: 220 LEYTQTYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIREL 279
Query: 263 AFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK----------------- 305
AFLNPKLTIALRKED+DPEK Q NEYF+AGGL EYVQ+LNTDK
Sbjct: 280 AFLNPKLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKESEGLFESDNGRWEGRF 339
Query: 306 ---------------------------KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTM 338
K +HDV+ FRK++DGIT+D+ALQWC DAYSDT+
Sbjct: 340 WYSGVSESAADVSALICFSNSLAWSVLKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTI 399
Query: 339 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE--------- 389
LGYANSIRT+DGGTHI+G+KASLTRTLNSLGKKSK +K + G +
Sbjct: 400 LGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKQFQLFFYGHDSKRQNEKRNSYY 459
Query: 390 -----GL----------------TCII---------------------------SVRVPN 401
GL TC + SV+VPN
Sbjct: 460 LLHNFGLWIVLLNRYQVIGRFRNTCFMPLTQNKCQEKDITLSGEHVREGLTCVVSVKVPN 519
Query: 402 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 461
PEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAALAAKRAR
Sbjct: 520 PEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRAR 579
Query: 462 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ-------- 513
+LVRQKSVLRSSSLPGKLADCSS+ PE+ EIFIVEGDSAGGSAKQGRDRRFQ
Sbjct: 580 ELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQVKYTLSDE 639
Query: 514 ----AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 569
AILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILT
Sbjct: 640 SLQSAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILT 699
Query: 570 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 629
DADVDGAHIRTLLLTFFYRYQ+ LFDEG IYVGVPPLYKV RGKQV YCYD+A+LKK+KS
Sbjct: 700 DADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKS 759
Query: 630 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 689
SF NA Y++QRFKGLGEMMP+QLWETT++PEQR+LK+L +EDAAEAN+VFSSLMGARVD
Sbjct: 760 SFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARVD 819
Query: 690 TRKELIQNAANLVNLDHLDI 709
RKELIQNAAN+++LD LDI
Sbjct: 820 VRKELIQNAANMIDLDQLDI 839
>gi|115435866|ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group]
gi|75285839|sp|Q5NBJ3.1|GYRB_ORYSJ RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|56783730|dbj|BAD81142.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|56783751|dbj|BAD81163.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|113532222|dbj|BAF04605.1| Os01g0268300 [Oryza sativa Japonica Group]
Length = 729
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/668 (77%), Positives = 589/668 (88%), Gaps = 10/668 (1%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHL 110
N V RAF++S+ A+EA +E V+ Y + +QVLE L+ VR RP MYIGSTG RGLHHL
Sbjct: 63 NGVAVRAFMASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGSRGLHHL 122
Query: 111 VYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLH 161
VYEILDNAVDEAQAGYA+ ++V L DNS IP D+HP T KS +ETVLT++H
Sbjct: 123 VYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMH 182
Query: 162 AGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCH 221
AGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY Q YSRGK +T LT
Sbjct: 183 AGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAITMLTSR 242
Query: 222 VLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE 281
L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP+LTIAL KE+ D +
Sbjct: 243 TLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDDLQ 302
Query: 282 KNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGY 341
Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++LQWCSD+YSDT+LGY
Sbjct: 303 V-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLGY 361
Query: 342 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 401
ANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHVREG+TCII+V+VPN
Sbjct: 362 ANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIAVKVPN 421
Query: 402 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 461
PEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAALAAKRAR
Sbjct: 422 PEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRAR 481
Query: 462 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 521
+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQGRDR+FQAILPLRGK
Sbjct: 482 ELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAILPLRGK 541
Query: 522 ILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 581
ILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+ILTDADVDGAHIRTL
Sbjct: 542 ILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDGAHIRTL 601
Query: 582 LLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQR 641
LLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++ ++FP+NA Y IQR
Sbjct: 602 LLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNASYHIQR 661
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
FKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RK+LIQNAA++
Sbjct: 662 FKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLIQNAASM 721
Query: 702 VNLDHLDI 709
VNL+HLDI
Sbjct: 722 VNLEHLDI 729
>gi|293336227|ref|NP_001168561.1| uncharacterized protein LOC100382343 [Zea mays]
gi|223949177|gb|ACN28672.1| unknown [Zea mays]
gi|414877013|tpg|DAA54144.1| TPA: hypothetical protein ZEAMMB73_725573 [Zea mays]
Length = 726
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/686 (75%), Positives = 591/686 (86%), Gaps = 12/686 (1%)
Query: 33 PRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVR 92
PR F V++ TR N V RAF++S+ A+EA E VS Y + +QVLE L+ VR
Sbjct: 44 PRLLFGPSAVAAAA-TRRNGVRVRAFMASTTASEAMHEKQVSAEYTAANVQVLEALDGVR 102
Query: 93 KRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPID 143
RP MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L DNS IP D
Sbjct: 103 TRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGHASKIDVVLHDDNSVSVTDNGRGIPTD 162
Query: 144 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 203
+HP T KS +ETVLT++HAGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG
Sbjct: 163 MHPQTKKSCVETVLTLMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGK 222
Query: 204 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 263
E+ Q YSRGKP T LT L ++ RQGTRIRFWPDK +FTT I FD NTI+ RIRELA
Sbjct: 223 EHRQSYSRGKPTTRLTSSTLTGETSSRQGTRIRFWPDKDIFTTTIDFDFNTISSRIRELA 282
Query: 264 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 323
FLNP+LTI L KE+ Q NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+
Sbjct: 283 FLNPELTIILTKEEG--HTVQRNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITV 340
Query: 324 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 383
D++LQW SD+YSDT+LGYANSIRTIDGGTHI+G+KASLTRT+N+L KKSKT+KDKDI+LS
Sbjct: 341 DVSLQWSSDSYSDTVLGYANSIRTIDGGTHIDGLKASLTRTINNLAKKSKTIKDKDITLS 400
Query: 384 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 443
GEHVREG+TCIISV+VP+PEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSI
Sbjct: 401 GEHVREGMTCIISVKVPSPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSI 460
Query: 444 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 503
LSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S PEESEIFIVEGDSAGGS
Sbjct: 461 LSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASANPEESEIFIVEGDSAGGS 520
Query: 504 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 563
AKQGRDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI ALGLGVKGEDFKKEALRYH
Sbjct: 521 AKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYH 580
Query: 564 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 623
KI+ILTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGK YCYDDA+
Sbjct: 581 KIVILTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKLAHYCYDDAD 640
Query: 624 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 683
LK++ ++FP+NA Y IQRFKGLGEMMP QLWETT++PE+R+LKQL +EDAAEANVVFSSL
Sbjct: 641 LKEIVNTFPANASYHIQRFKGLGEMMPAQLWETTMDPERRLLKQLRVEDAAEANVVFSSL 700
Query: 684 MGARVDTRKELIQNAANLVNLDHLDI 709
MG RV+ RKELIQ AA+++N+D LDI
Sbjct: 701 MGTRVEYRKELIQKAASMINIDQLDI 726
>gi|125569849|gb|EAZ11364.1| hypothetical protein OsJ_01229 [Oryza sativa Japonica Group]
Length = 753
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/692 (74%), Positives = 589/692 (85%), Gaps = 34/692 (4%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQ------------------------VLE 86
N V RAF++S+ A+EA +E V+ Y + +Q VLE
Sbjct: 63 NGVAVRAFMASTAASEAMQEKRVAGEYTAANVQHILWIPYFHGHILWIPYFDGGSWSVLE 122
Query: 87 GLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS------- 139
L+ VR RP MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ ++V L DNS
Sbjct: 123 ALDGVRTRPGMYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNG 182
Query: 140 --IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVT 197
IP D+HP T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVT
Sbjct: 183 RGIPTDIHPQTKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVT 242
Query: 198 VWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAG 257
VWRDG EY Q YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAG
Sbjct: 243 VWRDGKEYRQNYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAG 302
Query: 258 RIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD 317
RIRELAFLNP+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK+
Sbjct: 303 RIRELAFLNPELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKE 361
Query: 318 VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKD 377
+DGIT+D++LQWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KD
Sbjct: 362 MDGITVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKD 421
Query: 378 KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHP 437
KDISLSGEHVREG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHP
Sbjct: 422 KDISLSGEHVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHP 481
Query: 438 DVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEG 497
DVLDSILSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEG
Sbjct: 482 DVLDSILSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEG 541
Query: 498 DSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK 557
DSAGGSAKQGRDR+FQAILPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF K
Sbjct: 542 DSAGGSAKQGRDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNK 601
Query: 558 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 617
EALRYHKI+ILTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ Y
Sbjct: 602 EALRYHKIVILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHY 661
Query: 618 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 677
CYDDA+LK++ ++FP+NA Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEAN
Sbjct: 662 CYDDADLKELVNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEAN 721
Query: 678 VVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
VVFSSLMG RVD RK+LIQNAA++VNL+HLDI
Sbjct: 722 VVFSSLMGTRVDVRKQLIQNAASMVNLEHLDI 753
>gi|125525330|gb|EAY73444.1| hypothetical protein OsI_01322 [Oryza sativa Indica Group]
Length = 647
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/626 (79%), Positives = 560/626 (89%), Gaps = 11/626 (1%)
Query: 84 VLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSIPID 143
VLE L+ VR RP MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ I P D
Sbjct: 33 VLEALDGVRTRPGMYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKI----------PTD 82
Query: 144 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 203
+HP T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG
Sbjct: 83 IHPQTKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGK 142
Query: 204 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 263
EY YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELA
Sbjct: 143 EYRLNYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELA 202
Query: 264 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 323
FLNP+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+
Sbjct: 203 FLNPELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITV 261
Query: 324 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 383
D++LQWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLS
Sbjct: 262 DVSLQWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLS 321
Query: 384 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 443
GEHVREG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSI
Sbjct: 322 GEHVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSI 381
Query: 444 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 503
LSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGS
Sbjct: 382 LSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGS 441
Query: 504 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 563
AKQGRDR+FQAILPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYH
Sbjct: 442 AKQGRDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYH 501
Query: 564 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 623
KI+ILTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+
Sbjct: 502 KIVILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDAD 561
Query: 624 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 683
LK++ ++FP+NA Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSL
Sbjct: 562 LKELVNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSL 621
Query: 684 MGARVDTRKELIQNAANLVNLDHLDI 709
MG RVD RK+LIQNAA++VNL+HLDI
Sbjct: 622 MGTRVDVRKQLIQNAASMVNLEHLDI 647
>gi|148906969|gb|ABR16629.1| unknown [Picea sitchensis]
Length = 737
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/736 (67%), Positives = 603/736 (81%), Gaps = 28/736 (3%)
Query: 1 MARLLLK-APYLHIRVLMASRCFCSFSSSLFFKPRT---NFAIRGVSSQVLTRSNV---- 52
MA ++K P +R+L ASR CS S++ F P +F S + TR
Sbjct: 3 MAMAMIKLPPTTSLRLLTASRSLCS-SNTRFRAPHIRLISFVANVSQSSIPTRRACTFRR 61
Query: 53 ---VLP-------RAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGST 102
V+P RAF SS+++TE ++P +K+Y + QIQVLEGL+ VRKRP MYIGST
Sbjct: 62 ITNVIPARYSTTIRAFTSSAVSTEPSSDSPAAKSYDAGQIQVLEGLDPVRKRPGMYIGST 121
Query: 103 GPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSAL 153
GPRGLHHLVYE+LDNA+DEAQAG+A+NI+V + D S IP DLHP T+KSAL
Sbjct: 122 GPRGLHHLVYEVLDNAIDEAQAGFATNIDVIIFLDGSVSIMDDGRGIPTDLHPVTHKSAL 181
Query: 154 ETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK 213
ETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE LEVTVWRDG E++Q ++ GK
Sbjct: 182 ETVLTVLHAGGKFGGESSGYSVSGGLHGVGLSVVNALSEKLEVTVWRDGKEWNQTFACGK 241
Query: 214 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 273
PVT LT + + + K RQGTR+RFWPDK+VFTT +FD+NTI GR RELAFLNP++ I L
Sbjct: 242 PVTELTSNEILGEFKFRQGTRVRFWPDKEVFTTTTEFDYNTIVGRARELAFLNPQVKITL 301
Query: 274 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 333
++E+ D E YNEY +AGGL EYV WLN DK P+ + F ++ DG+ +++ALQWCSDA
Sbjct: 302 KQENKDAENVTYNEYHYAGGLVEYVCWLNRDKTPILKPISFTREKDGVIVNVALQWCSDA 361
Query: 334 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 393
Y+DT+LGYANSIRT DGG+H++GVK++LTRT N+LG+KSK +K+KD +LSGEHVREGLT
Sbjct: 362 YTDTLLGYANSIRTSDGGSHMDGVKSALTRTFNNLGRKSKLIKEKDENLSGEHVREGLTG 421
Query: 394 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 453
I+SV+VP PEFEGQTKTRLGNPEVR++VDQ+VQEYLTEYLE +P VL+SILSK+L+A KA
Sbjct: 422 IVSVKVPKPEFEGQTKTRLGNPEVRRIVDQAVQEYLTEYLECNPGVLESILSKALNAYKA 481
Query: 454 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 513
A+AAK+AR+LVR+KSVLR S+LPGKLADCS++ P E+EIFIVEG+SAGGSAKQGRDRRFQ
Sbjct: 482 AMAAKKARELVRRKSVLRPSALPGKLADCSASDPREAEIFIVEGESAGGSAKQGRDRRFQ 541
Query: 514 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 573
AILPLRGKILNVERKDEAAMYKNEEIQNLI LGLG+KGEDFKK+ALRYHKIIILTDADV
Sbjct: 542 AILPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGLKGEDFKKDALRYHKIIILTDADV 601
Query: 574 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 633
DGAHIRTLLLTFF+RYQ+ LF+EG IYVGVPPLYKVERG+Q YC+D+ ELKK++ +FPS
Sbjct: 602 DGAHIRTLLLTFFFRYQRALFEEGYIYVGVPPLYKVERGRQAHYCFDEDELKKLQKTFPS 661
Query: 634 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 693
NA Y+IQRFKGLGEMMP+QLWETTL+P R LKQL +EDAAEAN+VFS LMG RV+ RKE
Sbjct: 662 NASYNIQRFKGLGEMMPLQLWETTLDPATRKLKQLTVEDAAEANMVFSLLMGNRVEPRKE 721
Query: 694 LIQNAANLVNLDHLDI 709
LI+N+A+ ++++ LDI
Sbjct: 722 LIENSASKISIEKLDI 737
>gi|168056555|ref|XP_001780285.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668339|gb|EDQ54949.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 640
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/640 (68%), Positives = 545/640 (85%), Gaps = 12/640 (1%)
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS-- 139
+QVLEGLEAVRKRP MYIGSTG +GLHHLVYE+LDNA+DEAQAG+AS ++V + D S
Sbjct: 1 MQVLEGLEAVRKRPGMYIGSTGTKGLHHLVYEVLDNAIDEAQAGFASTVDVVIHTDGSVS 60
Query: 140 -------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 192
IP D+HP T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVG+SVVNALSE
Sbjct: 61 ISDNGRGIPTDVHPVTRKSALETVLTVLHAGGKFGGESSGYSVSGGLHGVGISVVNALSE 120
Query: 193 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQ 249
++VTVWR+G EY Q + GK V+ L+ LP D K R GTR++F PDKQ +FT+ +
Sbjct: 121 RVDVTVWRNGHEYRQSFEFGKAVSPLSAFPLPNDQKGRTGTRVKFLPDKQGKQLFTSTTE 180
Query: 250 FDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH 309
FD+NTI+GR RELAFLNP++TI L +E ++ EK + N Y F+GGL EYV WLN DK+ LH
Sbjct: 181 FDYNTISGRARELAFLNPQVTINLMQEHANSEKVRSNAYHFSGGLNEYVLWLNNDKERLH 240
Query: 310 DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLG 369
+ + ++ +G+ ID+ALQW +D Y+DT+LGYANSIRT DGGTH++G+KA++TRTLN+LG
Sbjct: 241 EPISIHREREGVAIDVALQWSADQYTDTILGYANSIRTSDGGTHLDGMKAAVTRTLNTLG 300
Query: 370 KKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYL 429
+K+K +K+KD +LSG+H REGLTC+++V+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE +
Sbjct: 301 RKAKILKEKDENLSGDHAREGLTCVVAVKVPNPEFEGQTKTRLGNPEVRRIVDQAVQELV 360
Query: 430 TEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 489
TEYLE HP+ L++ILSK+L A +AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P
Sbjct: 361 TEYLEQHPNTLEAILSKALQAFRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDPRN 420
Query: 490 SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG 549
+EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKD+AA+YKN+EIQNLI ALGLG
Sbjct: 421 AEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDDAAIYKNQEIQNLILALGLG 480
Query: 550 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV 609
VKGE+F K++LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LF+ GCIYVGVPPLYKV
Sbjct: 481 VKGEEFSKDSLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFEAGCIYVGVPPLYKV 540
Query: 610 ERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLV 669
ERGKQ YC+++++LK V +FPSNA Y+IQRFKGLGEMMP QLWETTL+P+QRMLK L
Sbjct: 541 ERGKQAHYCFNESDLKNVLKTFPSNASYNIQRFKGLGEMMPQQLWETTLDPQQRMLKLLT 600
Query: 670 IEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+EDAAEA+++FS+LMG +V+ RKELI+ A+ + L++LD+
Sbjct: 601 LEDAAEASMMFSTLMGDKVEPRKELIRTNASRMKLENLDL 640
>gi|168067741|ref|XP_001785766.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662596|gb|EDQ49430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 642
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/642 (68%), Positives = 547/642 (85%), Gaps = 14/642 (2%)
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS-- 139
+QVLEGLEAVRKRP MYIGSTG +GLHHLVYE+LDNA+DEAQAG+AS +++ + D S
Sbjct: 1 MQVLEGLEAVRKRPGMYIGSTGAKGLHHLVYEVLDNAIDEAQAGFASTVDIVMHTDGSVS 60
Query: 140 -------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 192
IP D+HP T KSALETVLTVLHAGGKFGG +SGYSVSGGLHGVG+SVVNALSE
Sbjct: 61 ISDNGRGIPTDVHPVTGKSALETVLTVLHAGGKFGGDNSGYSVSGGLHGVGISVVNALSE 120
Query: 193 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ-----VFTTA 247
++VTVWR+G EY Q + GK V+ L+ LP D K R GT ++F PDKQ +FT+
Sbjct: 121 RVDVTVWRNGHEYKQSFEFGKSVSHLSGSRLPRDQKGRTGTLVKFLPDKQGKSFLMFTST 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD++TI+GR RELAFLNP++TI L+++ ++PEK + N Y F+GGL EYV WLN DK+
Sbjct: 181 TEFDYSTISGRTRELAFLNPQVTIYLKQDHANPEKIRSNTYHFSGGLSEYVLWLNNDKER 240
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + + +GI ID++LQWC+D+Y+DT++GYANSIRT DGGTH++G+KA++TRTLN+
Sbjct: 241 LHEPISIHRKKEGIIIDVSLQWCADSYTDTIIGYANSIRTSDGGTHLDGIKAAVTRTLNT 300
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
LG+K+K +K+KD +LSG+H REGLTC++SV+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE
Sbjct: 301 LGRKAKILKEKDENLSGDHAREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRRLVDQAVQE 360
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
+TEYLE HP+ L++ILSK+L A +AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P
Sbjct: 361 LVTEYLEQHPNTLEAILSKALQAFRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDP 420
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
+ SEIFIVEGDSAGGSAKQGRDRR+QAILPLRGKILN+ERKD+AA+YKN+EIQNLI ALG
Sbjct: 421 KNSEIFIVEGDSAGGSAKQGRDRRYQAILPLRGKILNIERKDDAAIYKNQEIQNLILALG 480
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
LGVKGE+F K+ LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LF+ GCIYVGVPPLY
Sbjct: 481 LGVKGEEFSKDLLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFESGCIYVGVPPLY 540
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
KVERGKQ YC+++A+LK + +FPSNA Y+IQRFKGLGEMMP QLWETTL+P QRMLK
Sbjct: 541 KVERGKQAHYCFNEADLKNLLKTFPSNASYNIQRFKGLGEMMPQQLWETTLDPTQRMLKL 600
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
L +EDAAEA+++FS+LMG +V+ RKELIQN A+ + L++LD+
Sbjct: 601 LTLEDAAEASMMFSTLMGDKVEPRKELIQNNASRMKLENLDL 642
>gi|302761372|ref|XP_002964108.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
gi|300167837|gb|EFJ34441.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
Length = 723
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/663 (63%), Positives = 531/663 (80%), Gaps = 15/663 (2%)
Query: 56 RAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEIL 115
R F++++ T+A +P S Y + +IQVLEGLE VR+RP MYIGSTGPRGLHHL+YE+L
Sbjct: 67 RLFVTATAVTQAPAPSPTS--YDAGKIQVLEGLEPVRRRPGMYIGSTGPRGLHHLIYEVL 124
Query: 116 DNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKF 166
DNA+DE QAG+A+ ++V L +D S IP D+HPAT KS LETVLTVLHAGGKF
Sbjct: 125 DNAIDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPATGKSTLETVLTVLHAGGKF 184
Query: 167 GGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD 226
GG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q + RGK V +LT LP +
Sbjct: 185 GGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQVFQRGKAVGSLTTRSLPRE 244
Query: 227 SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN 286
S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP++TI L++E + ++
Sbjct: 245 SSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNPEVTINLKEESATTDE---- 300
Query: 287 EYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIR 346
+ F GGL EYV+WLN DK +HD + F + D I++++++QWCSDAYSDT+LGYANSIR
Sbjct: 301 VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSMQWCSDAYSDTLLGYANSIR 360
Query: 347 TIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEG 406
T DGGTH++G+K LTRTLN LG++SK +++K +LSGEH REGLTC+ISV+VP PEFEG
Sbjct: 361 TADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHAREGLTCVISVKVPEPEFEG 420
Query: 407 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 466
QTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+L A KAA AAK+AR+LVR+
Sbjct: 421 QTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKALQAYKAAEAAKKARELVRR 480
Query: 467 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE 526
K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQGRDR FQAILPL+GKILN+E
Sbjct: 481 KNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQGRDRAFQAILPLKGKILNIE 540
Query: 527 RKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFF 586
RKD+AA+YKN+EIQ+LI ALGLG +GE+F K+ LRYHKIIILTDADVDGAHIRTLLLTFF
Sbjct: 541 RKDDAAIYKNQEIQDLIVALGLGTRGEEFHKDTLRYHKIIILTDADVDGAHIRTLLLTFF 600
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLG 646
+RYQ+ LFD G IYVGVPPLYKVERGK YCY + EL+ + +F +NA Y+IQRFKGLG
Sbjct: 601 FRYQRALFDGGYIYVGVPPLYKVERGKHAHYCYSENELQGLLGTFAANAPYNIQRFKGLG 660
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDH 706
EMMP+QLW+TTL+P +RMLK+L +EDA EA+ FS LMG +V+ RKELI +A +
Sbjct: 661 EMMPLQLWDTTLDPSKRMLKKLTLEDAVEASFTFSRLMGDKVEPRKELILKSAAQFKQQN 720
Query: 707 LDI 709
LD+
Sbjct: 721 LDV 723
>gi|302820792|ref|XP_002992062.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
gi|300140184|gb|EFJ06911.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
Length = 618
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/622 (64%), Positives = 503/622 (80%), Gaps = 13/622 (2%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPA 147
MYIGSTGPRGLHHL+YE+LDNA+DE QAG+A+ ++V L +D S IP D+HPA
Sbjct: 1 MYIGSTGPRGLHHLIYEVLDNAIDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPA 60
Query: 148 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 207
T KS LETVLTVLHAGGKFGG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q
Sbjct: 61 TGKSTLETVLTVLHAGGKFGGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQ 120
Query: 208 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 267
+ RGK V +LT LP +S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP
Sbjct: 121 VFQRGKAVGSLTTRSLPRESSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNP 180
Query: 268 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 327
++TI L++E + ++ + F GGL EYV+WLN DK +HD + F + D I++++++
Sbjct: 181 EVTINLKEESATTDE----VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSM 236
Query: 328 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 387
QWCSDAYSDT+LGYANSIRT DGGTH++G+K LTRTLN LG++SK +++K +LSGEH
Sbjct: 237 QWCSDAYSDTLLGYANSIRTADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHA 296
Query: 388 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 447
REGLTC+ISV+VP PEFEGQTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+
Sbjct: 297 REGLTCVISVKVPEPEFEGQTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKA 356
Query: 448 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 507
L A KAA AAK+AR+LVR+K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQG
Sbjct: 357 LQAYKAAEAAKKARELVRRKNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQG 416
Query: 508 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 567
RDR FQAILPL+GKILN+ERKD+AA+YKN+EIQ+LI ALGLG +GE+F K+ LRYHKIII
Sbjct: 417 RDRAFQAILPLKGKILNIERKDDAAIYKNQEIQDLIVALGLGTRGEEFHKDTLRYHKIII 476
Query: 568 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 627
LTDADVDGAHIRTLLLTFF+RYQ+ LFD G IYVGVPPLYKVERGK YCY + EL+ +
Sbjct: 477 LTDADVDGAHIRTLLLTFFFRYQRALFDGGYIYVGVPPLYKVERGKHAHYCYSENELQGL 536
Query: 628 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 687
+F +NA Y+IQRFKGLGEMMP+QLW+TTL+P +RMLK+L +EDA EA+ FS LMG +
Sbjct: 537 LGTFAANAPYNIQRFKGLGEMMPLQLWDTTLDPSKRMLKKLTLEDAVEASFTFSRLMGDK 596
Query: 688 VDTRKELIQNAANLVNLDHLDI 709
V+ RKELI +A +LD+
Sbjct: 597 VEPRKELILKSAAQFKQQNLDV 618
>gi|254424108|ref|ZP_05037826.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
gi|196191597|gb|EDX86561.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
Length = 645
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/650 (60%), Positives = 499/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AG+ ++I
Sbjct: 1 MANNYGAQQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTHITA 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
AL AD S IP D+HP T KSALETVLTVLHAGGKFGG S GY VSGGLHGVG
Sbjct: 61 ALNADGSVTVTDDGRGIPTDIHPTTGKSALETVLTVLHAGGKFGGDS-GYKVSGGLHGVG 119
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+G + Q++ +G P+ L + GT++ F PD +
Sbjct: 120 VSVVNALSEWVEVTVWREGKVHTQRFEQGNPIGKLKTS----KGSTKTGTQVTFKPDATI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD---PEKNQYNEYFFAGGLEEYVQW 300
FT ++FD++TIA R+RELA+LN + I D +K Q + YF+ GG+ EYV++
Sbjct: 176 FTHTVEFDYDTIARRLRELAYLNAGVDITFTDYRLDLIKADKPQVSHYFYEGGIREYVEY 235
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH DV+ D +G+ ++ ALQWC DA+SD ++G+AN+IRT+DGGTH+EG+K
Sbjct: 236 INNEKEPLHPDVIYVNSDKNGVQVEAALQWCGDAFSDNLMGFANNIRTVDGGTHLEGLKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N + +K K KD + +++GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNVIARKRKKRKDTESNMAGENIREGLTAVVSVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYL+ +P V D+IL K++ A AA AAK+ARDLVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEALTEYLDFNPSVADAILEKAIQAFNAAEAAKKARDLVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
+DCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E+
Sbjct: 416 SDCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG+KGEDF + LRYH+I ++TDADVDGAHIRTLLLTFFYRYQ+ L D+G I
Sbjct: 476 QSLITALGLGIKGEDFAPDTLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERGK YCY + EL+ + P+NA Y+IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLYKLERGKNHTYCYSEKELQDGIDAMPTNAKYNIQRFKGLGEMMPQQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LK++ IEDAAEA+ +F+ LMG RV R++ I+ +N+ LDI
Sbjct: 596 PETRTLKRVEIEDAAEADRIFTVLMGDRVAPRRDFIETYGPRLNMADLDI 645
>gi|390438149|ref|ZP_10226642.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
gi|389838422|emb|CCI30766.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
Length = 640
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/647 (61%), Positives = 501/647 (77%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE+SEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 414 SERDPEKSEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGEDF LRYH+I+++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+
Sbjct: 474 ITALGLGIKGEDFDPSQLRYHRIVLMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERGK YCY D EL++ + FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 534 CPPLYKLERGKNHSYCYSDRELQQKIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAA+A +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 594 RTLKRVEIEDAAKAEELFTILMGDRVAPRREFIETHGSRLNLTDLDI 640
>gi|166367564|ref|YP_001659837.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|422301910|ref|ZP_16389275.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|425463513|ref|ZP_18842843.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
gi|166089937|dbj|BAG04645.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|389788978|emb|CCI15027.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|389831668|emb|CCI25386.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
Length = 640
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/647 (61%), Positives = 500/647 (77%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE SEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 414 SERDPERSEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGEDF LRYH+I+++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+
Sbjct: 474 ITALGLGIKGEDFDPSQLRYHRIVLMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERGK YCY D EL++ + FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 534 CPPLYKLERGKNHSYCYSDRELQQKIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAA+A +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 594 RTLKRVEIEDAAKAEELFTILMGDRVAPRREFIETHGSRLNLTDLDI 640
>gi|170077957|ref|YP_001734595.1| DNA gyrase subunit B [Synechococcus sp. PCC 7002]
gi|169885626|gb|ACA99339.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7002]
Length = 640
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/647 (60%), Positives = 499/647 (77%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AGY + I V
Sbjct: 1 MTSNYSAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGYCTEINV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP+D+HP+T KSALETV+TVLHAGGKFG + GY VSGGLHGVG
Sbjct: 61 EINADGSVTVTDNGRGIPVDVHPSTGKSALETVMTVLHAGGKFG--AGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD Y Q+Y RG P LT P + GT + F PD ++
Sbjct: 119 VSVVNALSEWVEVTVWRDETTYKQRYERGVPQGELTEAPAP---QHLSGTSVCFLPDAKI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT FD+NT+AGR+RELA+LN + I D EK N YF+ GG++EYV ++N
Sbjct: 176 FTETTVFDYNTLAGRLRELAYLNAGVRIVF--TDHRSEKQASNTYFYEGGIKEYVAYMNR 233
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K PLH+ ++ + +G+ +++ALQWC+DAYSD +LG+AN+IRT+DGGTH+EG+K+ LT
Sbjct: 234 EKSPLHEEIIYVTGEKNGVQLEVALQWCTDAYSDNLLGFANNIRTVDGGTHLEGLKSVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N++ +K +KD D +L+GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTMNTVARKRNKLKDNDSNLAGENIREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E + +V+D+IL K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SFVGEVLTEYFEFNLNVVDAILEKAIQAFKAAEAARRARELVRRKSVLESSLLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P ++EI++VEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 414 SERDPAKTEIYLVEGDSAGGSAKQGRDRAFQAILPLRGKILNIEKTDDAKIYKNNEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F E LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+
Sbjct: 474 ITALGLGIKGEEFNPEKLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRELVDQGYIYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERGK YCY D EL+ S P NA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 534 CPPLYKLERGKNHAYCYSDRELQDQISQLPDNAKYNIQRFKGLGEMMPQQLWDTTMNPES 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAAEA+ +F+ LMG RV R+E I+ A +N+D LDI
Sbjct: 594 RTLKRVEIEDAAEADRIFTVLMGDRVAPRREFIEMNAPKLNMDDLDI 640
>gi|159028965|emb|CAO87426.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 640
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/647 (61%), Positives = 499/647 (77%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ I+FD++T++GR+RELA+LN + I D E+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRAEEPHIETYCYEGGIKEYVAYMCR 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE+SEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 414 SERDPEKSEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGEDF LRYH+I+++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+
Sbjct: 474 ITALGLGIKGEDFDPSQLRYHRIVLMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERGK YCY D EL++ + FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 534 CPPLYKLERGKNHSYCYSDRELQQKIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAA+A +F+ LMG RV R+E I+ +NL LDI
Sbjct: 594 RTLKRVEIEDAAKAEELFTILMGDRVAPRREFIETHGPRLNLTDLDI 640
>gi|33241245|ref|NP_876187.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238775|gb|AAQ00840.1| DNA gyrase B subunit [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 658
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 495/651 (76%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AG+ + I V
Sbjct: 10 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCNEIVV 69
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L +D S IP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 70 VLCSDGSASISDNGRGIPTDVHPKTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 127
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G ++Q++ RG P+ L PV K GT++ F PD +
Sbjct: 128 VSVVNALSEWVEVTVRRQGHIHNQRFERGAPIGNLRSTKQPVSEKKLTGTKVNFKPDTDI 187
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED---SDPEKNQYNE-YFFAGGLEEYVQ 299
FTT I FD++ ++ R+RELA+LN + I R E SD E+ Y E YF+ GG++EYV
Sbjct: 188 FTTGIVFDYSILSSRLRELAYLNGGVKIVFRDERQSVSDKEEKAYEEVYFYEGGIKEYVA 247
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N++K LH +++ + +G+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 248 YMNSEKDALHPEIIYVNSEKEGVQVEAALQWCIDAYSDSILGFANNIRTVDGGTHIEGLK 307
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLNS +K KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 308 TVLTRTLNSFARKRGKRKDGDSNLAGENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVR 367
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L +YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL S++LPGK
Sbjct: 368 GIVDSLVGESLAQYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESTTLPGK 427
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 428 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 487
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI LGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 488 IQALITGLGLGIKGEDFSLKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGY 547
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y+ PPLYKVERGK YCY++ +L+K +SF A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 548 VYIACPPLYKVERGKNHTYCYNEGDLQKTITSFGEKANYTIQRFKGLGEMMPKQLWETTM 607
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 608 DPSTRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSVELDMASLDI 658
>gi|317968499|ref|ZP_07969889.1| DNA gyrase subunit B [Synechococcus sp. CB0205]
Length = 653
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/651 (60%), Positives = 493/651 (75%), Gaps = 18/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNEIRV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
A+ D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 AIEEDGSCSVSDNGRGIPTDVHPKTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EV V+R G E+ Q++ RG P+ TL + P R GT +RF PD ++
Sbjct: 125 VSVVNALSEWVEVVVYRQGKEHRQRFERGAPIGTLA--IEPAADASRTGTTVRFKPDLEI 182
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I+FD+NT++ R+RELA+LN + I R E + E + E Y + GG++EYV
Sbjct: 183 FTVGIEFDYNTLSARLRELAYLNGGVKIVFRDERPAARNAEGEAHEEIYHYEGGIKEYVA 242
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH D++ + DG+ I+ ALQWC DAYSD + G+AN+IRT+DGGTHIEG+K
Sbjct: 243 YMNAEKDALHPDIIYVNSEKDGVQIEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLK 302
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 303 TVLTRTLNTFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 362
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L EYLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 363 GIVDSLVGEALGEYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 422
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 423 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 482
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGE+F + LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQK+L + G
Sbjct: 483 IQALITALGLGIKGEEFDDKNLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKSLVEGGY 542
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++A+LK F A ++IQRFKGLGEMMP QLWETT+
Sbjct: 543 IYIACPPLYKVERGKNHTYCYNEADLKTTIEGFGEKANFTIQRFKGLGEMMPKQLWETTM 602
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P RM+K++ I DAAEA+ +F+ LMG +V R+E I+ + ++L LDI
Sbjct: 603 DPSTRMMKRVEIADAAEADRIFTILMGDKVAPRREFIETHSAELDLAQLDI 653
>gi|22298189|ref|NP_681436.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
gi|22294368|dbj|BAC08198.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
Length = 640
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/647 (60%), Positives = 501/647 (77%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y S Q++VL+GLE VR RP MYIGSTGP+GLHHLVYE++DN+VDEA AGY S I V
Sbjct: 1 MTAEYSSAQLRVLKGLEPVRTRPGMYIGSTGPKGLHHLVYEVVDNSVDEALAGYCSTILV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D+HP T S +ETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 QINADGSVTVTDDGRGIPTDIHPDTGVSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LEVTVWR+G +HQ+Y RG P T L P D+++R+GT + F+PD+Q+
Sbjct: 119 VSVVNALSEWLEVTVWRNGFVHHQRYERGVPTTPL--EKTP-DTEERRGTSVTFFPDRQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT I+FD + R+RELA+LN + I + P ++ Y + GG+ EYV+++
Sbjct: 176 FTETIEFDAKVLMTRLRELAYLNAGIRIEFKDLRVTPPLSE--TYCYEGGIREYVRYMVQ 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+PLH +++ + + D + ++ ALQWC+DAYS+ +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKEPLHPEIIYIQGEKDDVQVEAALQWCADAYSENLLGFANNIRTIDGGTHMEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN+LG+K +K+ + +L+GE++REGLT IISV+VPNPEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNALGRKRNKLKENNANLAGENIREGLTAIISVKVPNPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V LTEYL+ HP+V D+IL K++ A AA AA+RAR++VR+KSVL SS+LPGKLADC
Sbjct: 354 AIVGAALTEYLDFHPNVTDTILEKAIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E+Q+L
Sbjct: 414 SSRDPAVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEVQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLGVKGE+F LRYHKII++TDADVDG+HIRTLLLTFFYRYQ+ L ++G +Y+
Sbjct: 474 ITALGLGVKGEEFDPAKLRYHKIILMTDADVDGSHIRTLLLTFFYRYQQELVNQGFVYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVERG+Q YCY D EL++ +SFP NA Y+IQRFKGLGEMMP QLWETT+NPE
Sbjct: 534 CPPLYKVERGRQHFYCYSDRELQQQIASFPENANYTIQRFKGLGEMMPEQLWETTMNPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R+LK++ IEDAAEA+ +F+ LMG RV R+E I+ + L++LDI
Sbjct: 594 RILKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGPQLALENLDI 640
>gi|88809918|ref|ZP_01125423.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
gi|88786108|gb|EAR17270.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
Length = 655
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/651 (59%), Positives = 495/651 (76%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ + I+V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTEIQV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSACITDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV R + Q++ RG P+ +L P + + R GT +RF PD ++
Sbjct: 125 VSVVNALSEWVDVTVRRQAQVHRQRFERGAPIGSLVSEPQPAEEEGRTGTSVRFKPDIEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I FD+ T++ R+RELA+LN + I R E D E N + E YF+ GG++EYV
Sbjct: 185 FTVGIVFDYATLSARLRELAYLNGGVRIVFRDERENARDAEGNPHEEIYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDALHPEIIYVNAEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ+LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 485 IQSLITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY+++EL+K F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNESELQKTLEGFGEKANYNIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
>gi|427703473|ref|YP_007046695.1| DNA gyrase subunit B [Cyanobium gracile PCC 6307]
gi|427346641|gb|AFY29354.1| DNA gyrase, B subunit [Cyanobium gracile PCC 6307]
Length = 652
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 490/651 (75%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VEAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T +SALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 67 TLHGDGSASVTDNGRGIPTDIHPRTGRSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG P+ TL P GT +RF PD ++
Sbjct: 125 ISVVNALSEWVEVTVHRQGQVHRQRFERGLPIGTLASEDAP---DAHTGTSVRFRPDIEI 181
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE----YFFAGGLEEYVQ 299
F+ I+FD++T++ R+RELA+LN + I R E + Y + GG++EYV
Sbjct: 182 FSGGIEFDYHTLSARLRELAYLNGGVRIVFRDERAAAAGADGAAHEEIYHYEGGIKEYVA 241
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K PLH +++ DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 242 YMNAEKDPLHPEIIYVNATKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 301
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 302 TVLTRTLNTFAKKRGKRKDADANLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 361
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD +V E L EYLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 362 GIVDTTVGEALGEYLEFNPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 421
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 422 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 481
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF+++ LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 482 IQALITALGLGIKGEDFEEKNLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKALVEGGY 541
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ ELKKV F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 542 IYIACPPLYKVERGKNHNYCYNENELKKVLEGFGEKANYNIQRFKGLGEMMPKQLWETTM 601
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+PE RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + ++ LDI
Sbjct: 602 DPETRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDFAQLDI 652
>gi|427723858|ref|YP_007071135.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
gi|427355578|gb|AFY38301.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
Length = 640
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/647 (59%), Positives = 494/647 (76%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S YG++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AGY I V
Sbjct: 1 MSSNYGAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGYCDEINV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L D S IP D+HP T KSALETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 EILEDGSVRVTDNGRGIPTDIHPTTGKSALETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+ E+ Q+Y RG L V + + GT + F PD ++
Sbjct: 119 VSVVNALSEWVEVTVWRNETEHKQRYERGIAKGDL---VTAPATGHKSGTSVHFLPDAEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT FD+NT+AGR+RELA+LN + I D E+ + N YF+ GG++EYV ++N
Sbjct: 176 FTETTVFDYNTLAGRLRELAYLNASVKIIFT--DHRAEEPRSNTYFYEGGIKEYVAYMNR 233
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K LH+ ++ + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKTALHEEIIYVSGEKNNVQVEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N++ +K +KD + +L+GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTMNTVARKRNKIKDNESNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNSEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E L EY E + +V+DSIL K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SFMGEVLNEYFEFNLNVVDSILEKAIQAFKAAEAARRARELVRRKSVLESSLLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S +SEI++VEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 414 SERDAAKSEIYLVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDARIYKNNEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F E LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ++L D+G IY+
Sbjct: 474 ITALGLGIKGEEFNPEKLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYIYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERGK+ YCY D EL+ + P+NA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 534 CPPLYKLERGKKHTYCYSDRELQSEIAELPTNAKYNIQRFKGLGEMMPQQLWDTTMNPES 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAAEA+ +F+ LMG RV R+E I+ A +N+ LDI
Sbjct: 594 RTLKRVEIEDAAEADRIFTVLMGDRVAPRREFIETNAPKLNMLDLDI 640
>gi|194476918|ref|YP_002049097.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
gi|171191925|gb|ACB42887.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
Length = 652
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/651 (60%), Positives = 495/651 (76%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGL VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQADYGAEQIQVLEGLAPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDEILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L D S IP D+HP T KSALETVLTVLHAGGKFGG S Y VSGGLHGVG
Sbjct: 67 SLSEDGSATISDNGRGIPTDIHPHTGKSALETVLTVLHAGGKFGGDS--YKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LEVTV+R +HQ++ RG P+ LT ++R GT + F PD ++
Sbjct: 125 VSVVNALSEWLEVTVYRKSQLHHQRFERGVPIGLLTAQP---GEENRTGTSLTFKPDTKI 181
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKN-QYNE-YFFAGGLEEYVQ 299
FTT+I FD++T+AGR+RELA+LN + I+ R E S E Y E Y + GG++EYV
Sbjct: 182 FTTSITFDYSTLAGRLRELAYLNGGVRISFRDERISSGGENGIAYEEVYCYKGGIKEYVA 241
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K PLH +++ DG+ ++ ALQWC D YSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 242 YINKEKDPLHSEIIYVNSHKDGVQVEAALQWCVDTYSDSILGFANNIRTVDGGTHIEGLK 301
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLNS KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 302 TVLTRTLNSFAKKRGKRKDSDNNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 361
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E LT+YLE +P V++ IL K++ A AA AA+RAR+LVR+KS+L SS+LPGK
Sbjct: 362 GIVDSLVGEALTQYLEFNPSVIELILEKAIQAFNAAEAARRARELVRRKSILESSTLPGK 421
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 422 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 481
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGE+F +++LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQK+L + G
Sbjct: 482 IQALITALGLGIKGEEFDEKSLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKSLLEGGY 541
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCYD+ +L F + YSIQRFKGLGEMMP QLW TT+
Sbjct: 542 IYIACPPLYKVERGKNHTYCYDENDLSTTLKRFREKSNYSIQRFKGLGEMMPKQLWSTTM 601
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +NL LDI
Sbjct: 602 DPQSRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSADLNLAELDI 652
>gi|148238483|ref|YP_001223870.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
gi|147847022|emb|CAK22573.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
Length = 655
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 491/651 (75%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ S I+V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCSEIQV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG P+ +L P + R GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGSLASEPQPAEEDGRTGTSVCFKPDIEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
F+ I FD+ T++ R+RELA+LN + I R E D E N + E YF+ GG++EYV
Sbjct: 185 FSVGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDAEGNPHEETYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDALHPEIIYVNAEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ +K K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L +YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGEALGQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L D G
Sbjct: 485 IQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVDGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ EL+K F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEPELQKTLEGFGEKANYNIQRFKGLGEMMPQQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMTALDI 655
>gi|148241191|ref|YP_001226348.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
gi|147849501|emb|CAK26995.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
Length = 657
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/651 (60%), Positives = 492/651 (75%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V
Sbjct: 12 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNTIDV 71
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 72 CLRADGSCSVADNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 129
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R + Q++ RG P+ +L K R GT + F PD ++
Sbjct: 130 VSVVNALSEWVEVTVHRQDKVHRQRFERGAPIGSLASEA---GEKGRTGTSVCFKPDIEI 186
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKNQYNE--YFFAGGLEEYVQ 299
FT I FD+ T++GR+RELA+LN + I R E ++ E Q +E YF+ GG+ EYV
Sbjct: 187 FTGGISFDYATLSGRLRELAYLNGGVKIVFRDERPEAAGEDGQPHEEIYFYEGGIREYVN 246
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K PLH D++ + DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 247 YMNAEKDPLHPDIIYVNSEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 306
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ +K KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 307 TVLTRTLNTFARKRGKRKDSDGNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 366
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+EYLE HP V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 367 GIVDTVVGEALSEYLEFHPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 426
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E
Sbjct: 427 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRNQAILPLRGKILNIEKTDDAKIYKNTE 486
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGE+F LRYH+I+I+TDADVDGAHIRTL+LTFFYRYQ+ L + G
Sbjct: 487 IQALITALGLGIKGEEFDVSNLRYHRIVIMTDADVDGAHIRTLILTFFYRYQRELVEGGY 546
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +LKK F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 547 IYIACPPLYKVERGKNHTYCYNEQDLKKTLDGFGEKANYTIQRFKGLGEMMPQQLWETTM 606
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDAA+A+ +F+ LMG +V R+E I+ + +NL LDI
Sbjct: 607 DPTTRTMKRVEIEDAAQADRIFTILMGDKVAPRREFIETHSAELNLADLDI 657
>gi|159904302|ref|YP_001551646.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9211]
gi|159889478|gb|ABX09692.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9211]
Length = 658
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/659 (59%), Positives = 498/659 (75%), Gaps = 16/659 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E K N V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDSKVNKVQADYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ I V L D S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDEIVVVLCNDGSASITDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE +EVTV R + Q++ RG PV LT P K GT +
Sbjct: 120 SGGLHGVGVSVVNALSEWVEVTVRRQNQTHVQRFERGVPVGGLTSKDQPSSQKGVTGTTV 179
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP---EKNQYNE-YFFA 291
F PD Q+FT+ I+F++ T++ R+RELA+LN + I R E E + Y E YF+
Sbjct: 180 CFKPDNQIFTSGIEFEYATLSSRLRELAYLNGGVRIVFRDERKTSLTTEGDPYEEIYFYQ 239
Query: 292 GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 350
GG++EYV ++N++K LH +++ + DG+ ++ ALQWC DAYSD++LG+AN+IRT+DG
Sbjct: 240 GGIKEYVSYINSEKDALHPEIIYVNSEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDG 299
Query: 351 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 410
GTHIEG+K LTRTLNS +K KD D +L+GE++REGLT ++SV+VP PEFEGQTKT
Sbjct: 300 GTHIEGLKTVLTRTLNSFARKRGKRKDGDNNLAGENIREGLTVVLSVKVPEPEFEGQTKT 359
Query: 411 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 470
+LGN EVR +VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL
Sbjct: 360 KLGNTEVRGIVDSLVGESLSQYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVL 419
Query: 471 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 530
SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+
Sbjct: 420 ESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIEKTDD 479
Query: 531 AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQ 590
+ +YKN EIQ+LI ALGLG+KGE+F + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ
Sbjct: 480 SKIYKNTEIQSLITALGLGIKGEEFSSKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQ 539
Query: 591 KTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMP 650
K L + G IY+ PPLYKVERGK+ +YCY++++LKK F A Y+IQRFKGLGEMMP
Sbjct: 540 KELVEGGYIYIACPPLYKVERGKKHKYCYNESDLKKTIDGFGEKANYTIQRFKGLGEMMP 599
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V R++ I+ + ++L LDI
Sbjct: 600 KQLWETTMDPSTRMMKKVEIEDALEADRIFTILMGDKVAPRRQFIETHSVELDLASLDI 658
>gi|116074377|ref|ZP_01471639.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
gi|116069682|gb|EAU75434.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
Length = 655
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 492/651 (75%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ S I+V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCSEIQV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLAEDGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG + +L P + GT + F PD Q+
Sbjct: 125 VSVVNALSEWVEVTVRRQGKVHRQRFERGAAIGSLRSEEQPAEENGLTGTSVCFKPDIQI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I FD+ T+A R+RELA+LN + I R E PE + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLAARLRELAYLNGGVRIVFRDEREAARTPEGEPHEEIYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH D++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 485 IQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +L+K ++FP A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEQDLQKTLAAFPEKANYNIQRFKGLGEMMPAQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ +LDI
Sbjct: 605 DPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMTNLDI 655
>gi|123967056|ref|YP_001012137.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9515]
gi|123201422|gb|ABM73030.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9515]
Length = 655
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/658 (58%), Positives = 493/658 (74%), Gaps = 17/658 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEEKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ IE+ L D S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDQIEIVLKDDGSASISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD-RQGTR 234
SGGLHGVG+SVVNALSE + VTV+R+G E+ Q++ RG +T +K R+GT
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVFREGSEFTQRFERG--ITKGELKTQKQQNKSLRKGTI 177
Query: 235 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAG 292
I F PD +FT I+FD+ ++ R+RELA+LN + I E + E Y + G
Sbjct: 178 ICFKPDTTIFTDGIEFDYALLSSRLRELAYLNGGVKIIFIDERQKLPDGSFKEEIYLYDG 237
Query: 293 GLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
G++EYVQ++N +K+ +H +++ D + ++ ALQWCSD YSD +LG+AN+IRTIDGG
Sbjct: 238 GIKEYVQYINKEKESIHSEIIYVDSQKDNVYVEAALQWCSDVYSDNILGFANNIRTIDGG 297
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
THIEG+K LTRT N++ KK K+ D +LSGE++REGLT ++SV+VP+PEFEGQTKT+
Sbjct: 298 THIEGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGLTVVLSVKVPDPEFEGQTKTK 357
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN EVR +VD + E LT+Y+E +P+V D IL K++ + AA AAKRARDLVR+KSVL
Sbjct: 358 LGNTEVRGIVDSLIGESLTKYMEFNPNVFDLILEKAIQSFNAAEAAKRARDLVRRKSVLE 417
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
SS+LPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+
Sbjct: 418 SSTLPGKLADCSSRDPSGSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIEKTDDT 477
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 478 KIYKNTEIQSLITALGLGIKGEEFDVNSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQR 537
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 651
L ++G IY+ PPLYKVERGK +YCY++ +LKK F A Y+IQRFKGLGEMMP
Sbjct: 538 ELVEKGFIYIACPPLYKVERGKNHKYCYNEGQLKKTIEDFGEKANYNIQRFKGLGEMMPK 597
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
QLW+TT+NPE RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 598 QLWDTTMNPETRMMKKVEIEDALEADRIFNILMGDKVAPRREFIETHSANLDIATLDI 655
>gi|113954544|ref|YP_729329.1| DNA gyrase subunit B [Synechococcus sp. CC9311]
gi|113881895|gb|ABI46853.1| DNA gyrase, B subunit [Synechococcus sp. CC9311]
Length = 655
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/651 (59%), Positives = 493/651 (75%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ + I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCNEITV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSAFVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG + +L P + K GT + F PD Q+
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAAIGSLASEPQPAEEKGLTGTSVCFKPDHQI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I+FD++T++ R+RELA+LN + I R E D E E YF+ GG++EYV
Sbjct: 185 FTVGIEFDYSTLSARLRELAYLNGGVRIVFRDERQAARDQEGKPREELYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K PLH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDPLHPEIIYVNSEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFAKKRGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTL+LTFFYRYQK L + G
Sbjct: 485 IQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +L+K + F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEQQLQKTLAGFGEKANYNIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P RM+K++ ++DA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPSTRMMKRVEVQDALEADRIFTILMGDKVAPRREFIETHSADLDMASLDI 655
>gi|87123248|ref|ZP_01079099.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
gi|86168968|gb|EAQ70224.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
Length = 705
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/641 (60%), Positives = 489/641 (76%), Gaps = 16/641 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ S IEV
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCSEIEV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGDDGSASVTDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG P+ +L PV+ K R GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGSLASAPQPVEEKGRTGTSVCFKPDLEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I FD+ T++ R+RELA+LN + I R E + E + + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESALNAEGDAHEEVYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K PLH +++ + DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDPLHPEIIYVNAEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGEALSQYLEFNPSVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPAESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDARIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 485 IQALITALGLGIKGEDFDAKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGF 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +L+ + F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEQDLQTTLAGFGEKANYNIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+P R++K++ IEDA EA+ +F+ LMG +V R+E I+ A
Sbjct: 605 DPTTRLMKRVEIEDALEADRIFTILMGDKVAPRREFIETTA 645
>gi|158337618|ref|YP_001518793.1| DNA gyrase subunit B [Acaryochloris marina MBIC11017]
gi|158307859|gb|ABW29476.1| DNA gyrase, B subunit [Acaryochloris marina MBIC11017]
Length = 646
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 492/651 (75%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +I +
Sbjct: 1 MATNYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCKHIHI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D HP T KSALETV+TVLHAGGKF G S Y VSGGLHGVG
Sbjct: 61 YLNEDGSVRVTDDGRGIPTDKHPTTGKSALETVMTVLHAGGKFDGDS--YKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +E VWR+G + Q++ RG P + L V P D K+ GT I F PD +
Sbjct: 119 ISVVNALSEWVEAKVWRNGKVHTQRFERGIPKSELV--VEPTDRKE-SGTAITFLPDDTI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT +FD+ T+A R+RELA+LN + I+ R E + ++ + Y + GG++EYV +
Sbjct: 176 FTVTTEFDYKTLASRLRELAYLNAGVEISFHDNRLELLEADEPKVETYRYDGGIKEYVDY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+P+H+ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 236 MNRDKEPIHEECIYVEGERNNVQVEVALQWCRDAYSDNLLGFANNIRTIDGGTHLEGLKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+NSL +K +KD D +L GEH+REGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNSLARKRSKLKDGDSNLGGEHIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYL+ HP+V DS++ K+L A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFHPNVADSVIEKALQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPSTSEIYIVEGDSAGGSAKQGRDRGFQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG+KGE+F LRYH+II++TDADVDGAHIRTLLLTFFYRYQ+ L D+G I
Sbjct: 476 QSLITALGLGIKGEEFDVSQLRYHRIILMTDADVDGAHIRTLLLTFFYRYQRELIDQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPLYK+ERG+ YCY D EL+ V+ FP+NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 536 YIACPPLYKIERGRSHYYCYSDRELQNLVQHEFPANANYTIQRFKGLGEMMPTQLWDTTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 596 NPETRTLKQIDIEDAAEADRIFTILMGDRVAPRREFIETHGPRLNLAELDI 646
>gi|359459125|ref|ZP_09247688.1| DNA gyrase subunit B [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/651 (60%), Positives = 491/651 (75%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +I +
Sbjct: 1 MATNYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCKHIHI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D HP T KSALETV+TVLHAGGKF G S Y VSGGLHGVG
Sbjct: 61 YLNEDGSVRVTDDGRGIPTDKHPTTGKSALETVMTVLHAGGKFDGDS--YKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +E VWR+G + Q++ RG P + L P D K+ GT I F PD +
Sbjct: 119 ISVVNALSEWVEAKVWRNGKVHTQRFERGIPKSELIAE--PTDRKE-SGTAITFLPDNTI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT +FD+ T+A R+RELA+LN + I+ R E + ++ + Y + GG++EYV +
Sbjct: 176 FTVTTEFDYKTLASRLRELAYLNAGVEISFHDNRLELLEADEPKVETYRYDGGIKEYVDY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+P+H+ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 236 MNRDKEPIHEECIYVEGERNNVQVEVALQWCRDAYSDNLLGFANNIRTIDGGTHLEGLKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+NSL +K +KD D +L GEH+REGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNSLARKRSKLKDGDSNLGGEHIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYL+ HP+V DS++ K+L A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFHPNVADSVIEKALQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPSTSEIYIVEGDSAGGSAKQGRDRGFQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG+KGE+F LRYH+II++TDADVDGAHIRTLLLTFFYRYQ+ L D+G I
Sbjct: 476 QSLITALGLGIKGEEFDVSQLRYHRIILMTDADVDGAHIRTLLLTFFYRYQRELIDQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPLYK+ERG+ YCY D EL+ V+ FP+NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 536 YIACPPLYKIERGRSHYYCYSDRELQNLVQHEFPANANYTIQRFKGLGEMMPTQLWDTTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 596 NPETRTLKQIDIEDAAEADRIFTILMGDRVAPRREFIETHGPRLNLAELDI 646
>gi|33862190|ref|NP_893751.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634408|emb|CAE20093.1| DNA gyrase, subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 655
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/657 (58%), Positives = 495/657 (75%), Gaps = 15/657 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEEKRSNKISNDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEV-------ALLADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ +IE+ AL++DN IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLKEDGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE + VTV RDG E++Q++ +G L R+GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVHVTVSRDGYEFNQRFEKGIAKGELKSQKQQ-KKPFRKGTTI 178
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 293
F PD +FT I+FD+ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDTSIFTDGIKFDYALLSSRLRELAYLNGGVKIIFRDERQNLSDGSFKEEIYLYDGG 238
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++EYV+++N +K+ +H +V+ D + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYINKEKESIHSEVIYVDSQKDNVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HI+G+K LTRT N++ KK K+ D +LSGE++REGLT ++SV+VP PEFEGQTKT+L
Sbjct: 299 HIDGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGLTVVLSVKVPEPEFEGQTKTKL 358
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EVR +VD + E L +Y+E +P+V D IL K++ + AA AAKRARDLVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGESLIKYMEFNPNVFDLILEKAIQSFNAAEAAKRARDLVRRKSVLES 418
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLADCSS P +EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A
Sbjct: 419 STLPGKLADCSSRDPSGAEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAK 478
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 479 IYKNTEIQSLITALGLGIKGEEFNVNSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRD 538
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L ++G IY+ PPLYKVERGK +YCY++ +LK+ F A Y+IQRFKGLGEMMP Q
Sbjct: 539 LVEKGFIYIACPPLYKVERGKNHKYCYNENQLKQTIEDFGEKANYNIQRFKGLGEMMPKQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 599 LWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSANLDMATLDI 655
>gi|352095354|ref|ZP_08956457.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
gi|351679365|gb|EHA62507.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
Length = 655
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/651 (59%), Positives = 492/651 (75%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ + I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCNEITV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSAFVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG + +L P + K GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAAIGSLVSEPQPAEEKGVTGTSVCFKPDHEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I+FD++T++ R+RELA+LN + I R E D E E YF+ GG++EYV
Sbjct: 185 FTVGIEFDYSTLSARLRELAYLNGGVRIVFRDERQAARDSEGQPREELYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K PLH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDPLHPEIIYVNSEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFAKKRGKRKDSDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSTRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTL+LTFFYRYQK L + G
Sbjct: 485 IQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +L+ + F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEQQLQTTLAGFGEKANYNIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P RM+K++ ++DA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPSTRMMKRVEVQDALEADRIFTILMGDKVAPRREFIETHSADLDMASLDI 655
>gi|318042881|ref|ZP_07974837.1| DNA gyrase subunit B [Synechococcus sp. CB0101]
Length = 653
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/651 (60%), Positives = 490/651 (75%), Gaps = 18/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLNEDGSCAVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G E+ Q++ RG P+ +L P R GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVHRQGQEHLQRFERGAPIGSLASK--PAADPSRTGTSVCFKPDIEI 182
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I+FD++T++ R+RELA+LN + I R E + E + E Y + GG++EYV
Sbjct: 183 FTGGIEFDYHTLSARLRELAYLNGGVRIVFRDERPAARNAEGAAHEEIYHYEGGIKEYVA 242
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH D++ + DG+ ++ ALQWC DAYSD + G+AN+IRT+DGGTHIEG+K
Sbjct: 243 YMNAEKDALHPDIIYVNSEKDGVQVEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLK 302
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 303 TVLTRTLNAFAKKRGKRKDADANLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 362
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+EYLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 363 GIVDSLVGEALSEYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 422
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 423 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 482
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGE+F ++ LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 483 IQALITALGLGIKGEEFDEKNLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKALVEGGY 542
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +LK+V F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 543 IYIACPPLYKVERGKNHSYCYNEGDLKRVVEGFGEKANYTIQRFKGLGEMMPQQLWETTM 602
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDAAEA+ +F+ LMG +V R+E I+ + ++L LDI
Sbjct: 603 DPTTRTMKRVEIEDAAEADRIFTILMGDKVAPRREFIETHSAELDLAQLDI 653
>gi|427705874|ref|YP_007048251.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
gi|427358379|gb|AFY41101.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
Length = 645
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/650 (61%), Positives = 495/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHTQRYERGVPVTELVAKPY---KEARTGTSVTFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT I+FD T+AGR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTGIEFDFITLAGRLRELAYLNAGVKITFTDNRLELLKSDTPKIETYEYRGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH+ ++ + + + I++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVQGERSNVQIEVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D++ +YKN EI
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYH+III+TDADVDGAHIRTLLLTFFYRYQ++L ++G I
Sbjct: 476 QALITALGLGVKGEEFDSTQLRYHRIIIMTDADVDGAHIRTLLLTFFYRYQRSLIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKVERGK +YCY D EL++ + FP+NA Y+IQRFKGLGEMMP QLW TT+N
Sbjct: 536 YIACPPLYKVERGKNHEYCYSDRELQQAIAKFPANANYTIQRFKGLGEMMPAQLWTTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +N LDI
Sbjct: 596 PETRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNFAELDI 645
>gi|87301672|ref|ZP_01084512.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
gi|87283889|gb|EAQ75843.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
Length = 652
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/654 (60%), Positives = 486/654 (74%), Gaps = 25/654 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 IQHAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 67 RLCEDGSAEITDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTV R G + Q++ RG P+ +L P + GT +RF PD ++
Sbjct: 125 ISVVNALSEWVEVTVRRQGQVHRQRFERGTPIGSLRSEDDPSGAT---GTAVRFKPDIEI 181
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-------DSDPEKNQYNEYFFAGGLEE 296
F+ I FD+ T++GR+RELA+LN + I R E D P + Y+ + GG+ E
Sbjct: 182 FSGGIDFDYATLSGRLRELAYLNGGVRIVFRDEREAAKGSDGSPHEEIYH---YEGGIRE 238
Query: 297 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
YV ++N K PLH D++ DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIE
Sbjct: 239 YVTYMNAGKDPLHPDIIYVNASKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIE 298
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G+K LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 299 GLKTVLTRTLNTFAKKRGKRKDTDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNT 358
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR +VD V E L E+LE HP V+D IL K++ A AA AA+RAR+LVR+KSVL SS+L
Sbjct: 359 EVRGIVDSVVGEALGEFLEFHPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTL 418
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YK
Sbjct: 419 PGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYK 478
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N EIQ LI LGLG+KGE+F ALRYH+I+I+TDADVDGAHIRTLLLTFFYRYQKTL +
Sbjct: 479 NTEIQALITGLGLGIKGEEFNLSALRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKTLLE 538
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G IY+ PPLYKVERGK YCY++ +LKK F A Y+IQRFKGLGEMMP QLWE
Sbjct: 539 GGYIYIACPPLYKVERGKNHTYCYNEQDLKKTLDGFGEKANYTIQRFKGLGEMMPKQLWE 598
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
TT++P R +K++ IEDAAEA+ +F+ LMG +V R+E I+ + ++ LDI
Sbjct: 599 TTMDPTTRTMKRVEIEDAAEADRIFTILMGDKVAPRREFIETHSAELDFAQLDI 652
>gi|424513000|emb|CCO66584.1| DNA gyrase subunit B [Bathycoccus prasinos]
Length = 811
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/713 (55%), Positives = 509/713 (71%), Gaps = 34/713 (4%)
Query: 15 VLMASRCFCSFSS------SLFF----KPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIA 64
V MA+R S +S + FF +P+ ++ S LT++ A + S +
Sbjct: 110 VAMAARQHSSDTSRSRSPTTTFFSKQHQPQRRLSLTSSCSSPLTKT------ATRAISTS 163
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E+ ++ Y S IQVLEGLE VRKRP MYIG+T +GLHHLV+EILDN VDE QA
Sbjct: 164 SESMQD------YDSSSIQVLEGLEPVRKRPGMYIGNTSTKGLHHLVWEILDNGVDEIQA 217
Query: 125 GYASNIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
+ASN+++ L + DN IP+++HP T KS+LETVLT+LHAGGKFGG+ SGYSV
Sbjct: 218 NHASNVQLTLEKTGHVVVTDNGRGIPVEIHPKTGKSSLETVLTILHAGGKFGGAESGYSV 277
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPV-DSKDRQGTR 234
SGGLHGVG+SVVNALSE LEVTVWR EY Q +SRGK + L D + GTR
Sbjct: 278 SGGLHGVGVSVVNALSEELEVTVWRGDKEYFQTFSRGKTTSELQVSERKAKDGNPKTGTR 337
Query: 235 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGL 294
+RF PD +F +FD N I R++ELAFLN + DS ++ + + + GL
Sbjct: 338 VRFKPDNMIFQKVQEFDPNIIRARMKELAFLNSNAELRFTSVDSKTKEMKEDVLKYPNGL 397
Query: 295 EEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
+Y+ LN+DK +H+ + + + +G+ ++L LQW D YSDT+LGYANSIRTIDGG+HI
Sbjct: 398 TDYIVDLNSDKNAIHEPITLKTEHEGVKVELCLQWTHDDYSDTILGYANSIRTIDGGSHI 457
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G+K SLTR N+ +K+K +K +D +L G+H+REGL+ +I+V VP PEFEGQTKTRLGN
Sbjct: 458 DGLKFSLTRAFNTAARKAKLLKAEDTNLGGDHIREGLSAVIAVWVPQPEFEGQTKTRLGN 517
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
E RK V+ + E TEYLE HP+VL S+ K+ +ALKA+ AAKRARDLVR+KSVLRSSS
Sbjct: 518 SEARKAVEAMISEKFTEYLEFHPEVLSSVFKKAQAALKASEAAKRARDLVRRKSVLRSSS 577
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKL+DC+++ +E+EIF+VEGDSAGGS KQGRDR FQA+LPLRGKILNVERKDE AMY
Sbjct: 578 LPGKLSDCANSNADETEIFLVEGDSAGGSCKQGRDRAFQAVLPLRGKILNVERKDEQAMY 637
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
KN EIQ+++ ALGLGV GEDF LRY KIIILTDADVDGAHIRTLLLTF YRYQK LF
Sbjct: 638 KNTEIQSMVTALGLGVMGEDFNVNNLRYSKIIILTDADVDGAHIRTLLLTFLYRYQKALF 697
Query: 595 DEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 653
++G IYV VPPLYKVE GK+ V+YCYD+ ELKK + N ++QRFKGLGEMMP QL
Sbjct: 698 EQGHIYVAVPPLYKVESGKKNVKYCYDELELKKHLDTLGDNQPKNLQRFKGLGEMMPQQL 757
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
W+TTL+P+ R L++L ++DAA N FS LM +V R++ I++ +L+NLD
Sbjct: 758 WDTTLDPKTRTLRRLTVDDAAMVNHTFSLLMSDKVGPRRQFIEDEGPDLMNLD 810
>gi|428217864|ref|YP_007102329.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
gi|427989646|gb|AFY69901.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
Length = 646
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/645 (59%), Positives = 488/645 (75%), Gaps = 16/645 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY ++ IQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DN+VDEA GY I V L
Sbjct: 8 ETYNADNIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSVDEALGGYCDTILVEL 67
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
LAD S IP D+HP T KSALETV+TVLHAGGKF G+S Y VSGGLHGVG+S
Sbjct: 68 LADGSVAVTDNGRGIPTDVHPRTGKSALETVMTVLHAGGKFDGNS--YKVSGGLHGVGVS 125
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE +EV+VWR G + Q+Y RG P+ L V K ++GT++ F PD +F
Sbjct: 126 VVNALSEWVEVSVWRQGKLHQQRYERGIPIGNL--EVSTAKDKQKRGTKVCFMPDTMIFA 183
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T I+F+ + + GR+RELA+LN L I + D E ++ Y + GG+ EYV ++ DK
Sbjct: 184 TGIEFEFDILVGRLRELAYLNAGLKIEI--ADRRGETDKVETYQYDGGIREYVSYMTRDK 241
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH +++ + + + I I++A+QWC D+YSD + G+AN+IRT+DGGTH+EG+K LTRT
Sbjct: 242 EALHPEIIYIKGERNDIQIEVAMQWCIDSYSDNVFGFANNIRTVDGGTHLEGLKTVLTRT 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+NS +K K +KD D +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR VD
Sbjct: 302 INSTARKLKKLKDSDSNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGTVDSF 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L E++E +P V +I+ K+L + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS
Sbjct: 362 VGEVLNEFIEFNPQVASTIIEKALQSYNAAEAARRARELVRRKSVLESSTLPGKLADCSS 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P ESE+FIVEGDSAGGSAKQGRDR FQAILPLRGK+LN+ER D+ +YKN EIQ LI
Sbjct: 422 RDPSESELFIVEGDSAGGSAKQGRDRHFQAILPLRGKVLNIERADDNKIYKNAEIQALIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
++G+G++GE+F LRYHKII+L DADVDGAHIRTLLLTFFYRYQ+ L ++G IY+G P
Sbjct: 482 SIGMGIRGEEFDFSQLRYHKIILLADADVDGAHIRTLLLTFFYRYQRELVEQGNIYIGCP 541
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKVERG+ QYCY D EL+++ SSFP NA Y+IQRFKGLGEMMP+QLWETT+NPE R
Sbjct: 542 PLYKVERGRSHQYCYSDRELQQILSSFPENANYTIQRFKGLGEMMPLQLWETTMNPETRT 601
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LKQ+ IEDAAEA +F+ LMG +V R+E I+ +N+ LDI
Sbjct: 602 LKQITIEDAAEAERIFTILMGDKVAPRREFIETYGPKLNITDLDI 646
>gi|427718008|ref|YP_007066002.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
gi|427350444|gb|AFY33168.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
Length = 645
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/650 (60%), Positives = 501/650 (77%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AGY +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGYCTHVEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDKKVHLQRYERGVPVTELQAKPY---KEARTGTSTTFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
F+T I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FSTGIEFDYITLSGRLRELAYLNAGVKITFTDHRLELLKSDTAKVETYEYRGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP V DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G I
Sbjct: 476 QSLITALGLGVKGEEFDSTQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPL+KVERG+ +YCY + EL++ ++FPSNA Y+IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLFKVERGRNHEYCYSERELQQHIATFPSNANYNIQRFKGLGEMMPAQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PESRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|254430578|ref|ZP_05044281.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
gi|197625031|gb|EDY37590.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
Length = 652
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/652 (60%), Positives = 488/652 (74%), Gaps = 21/652 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AG+ I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCDQILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 67 VLNEDGSCAVSDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV+R + Q++ RG + +L K R GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVYRHDQVHTQRFERGAAIGSLAS---APGEKGRTGTTVCFKPDSEI 181
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYV 298
FT I FD+ T++ R+RELA+LN + I R E +N E YF+ GG++EYV
Sbjct: 182 FTGGISFDYATLSSRLRELAYLNGGVRIVFRDERQSA-RNAAGEPHEDIYFYEGGIKEYV 240
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++N +K PLH D++ + +G+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+
Sbjct: 241 AYMNAEKDPLHPDIIYVNAEKEGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGL 300
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EV
Sbjct: 301 KTVLTRTLNAFAKKRGKRKDADANLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEV 360
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +VD V E L E+LE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPG
Sbjct: 361 RGIVDTLVGEALGEFLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPG 420
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN
Sbjct: 421 KLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNT 480
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EIQ LI ALGLG+KGEDF ++ LRYH+I+I+TDADVDGAHIRTL+LTFF+RYQK L + G
Sbjct: 481 EIQALITALGLGIKGEDFDEKNLRYHRIVIMTDADVDGAHIRTLILTFFFRYQKALVEGG 540
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPLYKVERGK YCY++ +LKK SF A Y+IQRFKGLGEMMP QLWETT
Sbjct: 541 YIYIACPPLYKVERGKNHTYCYNEGDLKKTIESFGEKANYTIQRFKGLGEMMPQQLWETT 600
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
++P RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + ++L LDI
Sbjct: 601 MDPATRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDLAQLDI 652
>gi|443312981|ref|ZP_21042595.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
gi|442777131|gb|ELR87410.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
Length = 646
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/651 (58%), Positives = 496/651 (76%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +YG++QI+VL LE VR RP MYIG+TGP+GLHHLVYE++DN++DEA AG+ ++IE
Sbjct: 1 MTSSYGADQIRVLRDLEPVRMRPGMYIGTTGPKGLHHLVYEVVDNSIDEALAGHCTHIEA 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
AL D S IP D+HP T +SALETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 ALNTDGSVTITDDGRGIPTDVHPQTGRSALETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q++ RG P+ L D + R GT I F PD ++
Sbjct: 119 ISVVNALSEFVEVTVWRDKRVFTQRFERGIPIGDLQSKP---DKETRTGTSITFKPDSEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT I+FD+ T+A R+RELA+LN + I R E +++ Y +AGG++EY+ +
Sbjct: 176 FTVGIEFDYITLASRLRELAYLNAGVKITFTDHRLELLKSNESKTETYEYAGGIKEYISY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH+ ++ + + + + ++++LQWC+D+Y+D +LG+AN+IRT +GGTH++G+KA
Sbjct: 236 INRDKQPLHEEIIYVQGERNNVQVEVSLQWCTDSYTDNVLGFANNIRTAEGGTHLDGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N++ +K +K+ + +LSGEHVREGLT +ISV+VPNPEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPNPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE P V D IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPPVADQILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSTRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTL+LTFFYRYQ++L ++G I
Sbjct: 476 QALITALGLGVKGEEFDPSKLRYHRIVIMTDADVDGAHIRTLILTFFYRYQRSLVEQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPLYKVERG+ YCY + EL + ++ FP+NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 536 YIACPPLYKVERGRNHYYCYSERELNNLTQNEFPANANYTIQRFKGLGEMMPTQLWDTTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ +N LDI
Sbjct: 596 NPESRTLKRIEIEDAAEADRIFTVLMGDRVAPRREFIETYGPRLNFAELDI 646
>gi|56751624|ref|YP_172325.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
gi|81301300|ref|YP_401508.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|25019687|gb|AAN71773.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|56686583|dbj|BAD79805.1| DNA gyrase B subunit [Synechococcus elongatus PCC 6301]
gi|81170181|gb|ABB58521.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
Length = 645
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/650 (60%), Positives = 497/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+ QIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DNAVDEA AGY + I+V
Sbjct: 1 MANEYGASQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAVDEALAGYCNTIDV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
LL D S IP D+HP T KSALETVLT+LHAGGKFGG S LHGVG
Sbjct: 61 RLLEDGSCQVTDNGRGIPTDIHPQTGKSALETVLTILHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+G + Q++ +G P+ L V P D+ DR+GT++RF PD +
Sbjct: 119 VSVVNALSEYVEVTVWREGKTHQQRFEQGNPIGEL--QVAP-DADDRRGTQVRFKPDATI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQW 300
F+ +FD+ T+A R++ELA+LN + I E KN Y+F GG+ EYV +
Sbjct: 176 FSETTEFDYGTLASRLKELAYLNAGVRIDFTDERLQLTKNHEPHQETYYFEGGIREYVAY 235
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+NTDK+ LH +++ + + DG+ ++ ALQWC DAYSD +LG+AN+IRTIDGGTHIEG+K
Sbjct: 236 MNTDKQALHSEIIFVQSEKDGVQVEAALQWCVDAYSDNILGFANNIRTIDGGTHIEGLKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N++ +K KD D +LSGE++REGLT I+SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNTIARKRNKRKDADNNLSGENIREGLTAIVSVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP V D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDTLVGETLTEYLEFHPSVADLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLG+KGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G I
Sbjct: 476 QALITALGLGIKGEEFDASQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLLEQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERG+ YCY++ EL++ ++FP NA Y+IQRFKGLGEMMP QLWETT++
Sbjct: 536 YIACPPLYKLERGRNHYYCYNERELQERIATFPENANYTIQRFKGLGEMMPQQLWETTMD 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R +K++ IEDAAEA+ +F+ LMG RV R+E I+ +++ LDI
Sbjct: 596 PETRTMKRVEIEDAAEADRIFTILMGDRVQPRREFIETYGPQLSMAALDI 645
>gi|17232757|ref|NP_489305.1| DNA gyrase subunit B [Nostoc sp. PCC 7120]
gi|17134404|dbj|BAB76964.1| DNA gyrase B subunit [Nostoc sp. PCC 7120]
Length = 645
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/650 (60%), Positives = 499/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IPID H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EINADGSVAVTDDGRGIPIDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHTQRYERGVPVTELITNPY---KEARTGTSVTFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT +I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTNSIEFDYITLSGRLRELAYLNAGVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNTIARKRNKIKEHEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D++ +YKN EI
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYH+III+TDADVDGAHIRTL+LTFFYRYQ+ L ++G I
Sbjct: 476 QALITALGLGVKGEEFDSTQLRYHRIIIMTDADVDGAHIRTLILTFFYRYQRALIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKVERG+ +YCY + EL++ + FP+NA Y+IQRFKGLGEMMP QLW TT+N
Sbjct: 536 YIACPPLYKVERGRNYEYCYSERELQQAIAKFPANANYTIQRFKGLGEMMPEQLWTTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PETRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|124021870|ref|YP_001016177.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9303]
gi|123962156|gb|ABM76912.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9303]
Length = 655
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/655 (59%), Positives = 495/655 (75%), Gaps = 16/655 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+++ V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLV+E++DN+VDEA AG+
Sbjct: 3 EDSKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVFEVVDNSVDEALAGHCD 62
Query: 129 NIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V L +ADN IP D+H T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 EILVVLGPDGSASIADNGRGIPTDVHSRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+SVVNALSE +EVTV R G + Q++ RG + +L P K R GT + F P
Sbjct: 121 HGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGTAIGSLRSEAQPASEKGRTGTSVCFKP 180
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLE 295
D+++FT I FD+ T++ R+RELA+LN + I R E D E + E YF+ GG++
Sbjct: 181 DEEIFTVGIVFDYATLSARLRELAYLNGGVRIVFRDERQPVLDAEGAPHEEVYFYEGGIK 240
Query: 296 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV ++N +K LH +++ + D + ++ ALQWC DAYSD++LG+AN+IRT+DGGTHI
Sbjct: 241 EYVTYMNAEKDALHPEIIYVNSEKDNVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHI 300
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
EG+K LTRTLN+ +K K+ D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EVR +VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGEALSQYLEFNPAVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +Y
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIY 480
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
KN EIQ LI ALGLG+KGE+F + LRYH+++I+TDADVDGAHIRTL+LTFFYRYQK L
Sbjct: 481 KNTEIQALITALGLGIKGEEFDAKNLRYHRVVIMTDADVDGAHIRTLILTFFYRYQKELV 540
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G IY+ PPLYKVERGK YCY++A+L+ S FP A Y+IQRFKGLGEMMP QLW
Sbjct: 541 EGGYIYIACPPLYKVERGKNHTYCYNEADLQTTLSGFPEKANYTIQRFKGLGEMMPKQLW 600
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
ETT++P RM+K++ ++DA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 601 ETTMDPSTRMMKRVEVQDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
>gi|72383051|ref|YP_292406.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
gi|72002901|gb|AAZ58703.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
Length = 655
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/655 (59%), Positives = 494/655 (75%), Gaps = 16/655 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
K++ V YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNAVDEA AG+
Sbjct: 3 KDSKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAVDEALAGHCD 62
Query: 129 NIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I + L D S IP DLHP T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 QITILLCEDGSASVSDNGRGIPTDLHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+SVVNALSE +EVTV R + Q++ RG + +L L K+ GT + F P
Sbjct: 121 HGVGISVVNALSEWVEVTVRRQQQVHFQRFERGASIGSLKSENLSKSDKNLTGTTVCFKP 180
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR---KEDSDPEKNQYNE-YFFAGGLE 295
D Q+FT I F++ ++ R+RELA+LN + I R K+ +D + Y E YF+ GG++
Sbjct: 181 DDQIFTDGISFEYGILSSRLRELAYLNGGVRIVFRDERKQSNDSSQTPYEEVYFYEGGIK 240
Query: 296 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV+++ K LH +++ + DG+ ++ A+QWC DAYSD++LG+AN+IRTIDGGTHI
Sbjct: 241 EYVEYMTKAKDSLHPEIIYVNSEKDGVQVEAAMQWCVDAYSDSILGFANNIRTIDGGTHI 300
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
EG+K LTRTLNS KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNSFAKKRGKRKDGDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EVR +VD V L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGTALSQYLEFNPGVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A MY
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIEKTDDAKMY 480
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
KN EIQ+LI ALGLG+KGEDF+ + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L
Sbjct: 481 KNTEIQSLITALGLGIKGEDFEVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKDLV 540
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G IY+ PPLYKV RGK +YCY++++++K +SF A Y+IQRFKGLGEMMP QLW
Sbjct: 541 EGGYIYIACPPLYKVTRGKNHKYCYNESDMQKTLASFGEKANYTIQRFKGLGEMMPKQLW 600
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
ETT++P RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + ++L LDI
Sbjct: 601 ETTMDPTTRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSVDLDLATLDI 655
>gi|427729923|ref|YP_007076160.1| DNA gyrase subunit B [Nostoc sp. PCC 7524]
gi|427365842|gb|AFY48563.1| DNA gyrase, B subunit [Nostoc sp. PCC 7524]
Length = 645
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/650 (60%), Positives = 497/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY +++E+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D H T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDTHSRTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHTQRYERGVPVTELIAKPY---KEARTGTSVTFKPDVQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT +FD+ T+A R+RELA+LN + I R E E + Y + GG+ EY+ +
Sbjct: 176 FTTGTEFDYLTLANRLRELAYLNAGVKITFTDNRLELLKSETPKVEVYEYKGGIREYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH+ ++ + + + + +++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ D +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKLKENDSNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP + DS+L K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPSIADSVLDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D++ +YKN E+
Sbjct: 416 ADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G I
Sbjct: 476 QALITALGLGVKGEEFDSSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKVERG+ +YCY D EL+++ + FP+NA Y+IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLYKVERGRNHEYCYSDRELQEILAKFPANANYTIQRFKGLGEMMPGQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
P+ R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PQTRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLVDLDI 645
>gi|78183717|ref|YP_376151.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
gi|78168011|gb|ABB25108.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
Length = 655
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/651 (59%), Positives = 489/651 (75%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ I V
Sbjct: 7 VQNEYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCDRITV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 ILGADGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV R G + Q++ RG + TL P + GT + F PD Q+
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGTLLSESQPEAEQGETGTTVCFLPDTQI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED----SDPEKNQYNEYFFAGGLEEYVQ 299
FT I FD+ T++ R+RELA+LN + I R E SD YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVQIVFRDERESSLSDAGDPHEEIYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N K LH D++ + DG+ ++ ALQWC+DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKAKDALHPDIIYVNSEKDGVQVEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGESLSQFLEFNPSVISLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN E
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGE+F +++LRYH+++I+TDADVDGAHIRTL+LTFFYRY++ L + G
Sbjct: 485 IQALITALGLGIKGEEFDQKSLRYHRVVIMTDADVDGAHIRTLILTFFYRYKRELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++++L+K F NA Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNESDLQKTLKGFGENAKYTIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPSTRMMKRIEIEDALEADRIFTILMGDKVAPRREFIETHSKELDMAALDI 655
>gi|124026793|ref|YP_001015908.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL1A]
gi|123961861|gb|ABM76644.1| DNA gyrase, subunit B [Prochlorococcus marinus str. NATL1A]
Length = 655
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/655 (59%), Positives = 496/655 (75%), Gaps = 16/655 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
K++ V + YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNAVDEA AG+
Sbjct: 3 KDSKVQEAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAVDEALAGHCD 62
Query: 129 NIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I + L D S IP DLHP T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 QITILLCEDGSASVSDNGRGIPTDLHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+SVVNALSE +EVTV R + Q++ RG + +L L K+ GT + F P
Sbjct: 121 HGVGISVVNALSEWVEVTVRRQQQVHFQRFERGASIGSLKSENLSKSDKNLTGTTVCFKP 180
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR---KEDSDPEKNQYNE-YFFAGGLE 295
D Q+FT I F++ ++ R+RELA+LN + I R K+ +D + + E YF+ GG++
Sbjct: 181 DDQIFTDGISFEYGILSSRLRELAYLNGGVRIVFRDERKQSNDSSQTPHEEVYFYEGGIK 240
Query: 296 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV+++ K LH +++ + DG+ ++ A+QWC DAYSD++LG+AN+IRTIDGGTHI
Sbjct: 241 EYVEYMTKAKDSLHPEIIYVNSEKDGVQVEAAMQWCVDAYSDSILGFANNIRTIDGGTHI 300
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
EG+K LTRTLNS KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNSFAKKRGKRKDGDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EVR +VD V L++YLE +P+V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGTSLSQYLEFNPNVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A MY
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIEKTDDAKMY 480
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
KN EIQ+LI ALGLG+KGEDF+ + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L
Sbjct: 481 KNTEIQSLITALGLGIKGEDFEVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKDLV 540
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G IY+ PPLYKV RGK +YCY++++++K +SF A Y+IQRFKGLGEMMP QLW
Sbjct: 541 EGGYIYIACPPLYKVTRGKNHKYCYNESDMQKTLASFGEKANYTIQRFKGLGEMMPKQLW 600
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+TT++P RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + ++L LDI
Sbjct: 601 DTTMDPTTRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSVDLDLATLDI 655
>gi|33862394|ref|NP_893954.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9313]
gi|33640507|emb|CAE20296.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9313]
Length = 655
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/655 (58%), Positives = 492/655 (75%), Gaps = 16/655 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+++ V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLV+E++DN+VDEA AG+
Sbjct: 3 EDSKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVFEVVDNSVDEALAGHCD 62
Query: 129 NIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V L D S IP D+H T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 EILVVLGPDGSASISDNGRGIPTDVHSRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+SVVNALSE +EVTV R G + Q++ RG + +L P K R GT + F P
Sbjct: 121 HGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGTAIGSLRSEAQPASEKGRTGTSVCFKP 180
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLE 295
D+++FT I FD+ T++ R+RELA+LN + I R E D E + E YF+ GG++
Sbjct: 181 DEEIFTVGIVFDYATLSTRLRELAYLNGGVRIVFRDERQPVLDAEGAPHEEVYFYEGGIK 240
Query: 296 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV ++N +K LH +++ + D + ++ ALQWC DAYSD++LG+AN+IRT+DGGTHI
Sbjct: 241 EYVTYMNAEKDALHPEIIYVNSEKDNVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHI 300
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
EG+K LTRTLN+ +K K+ D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EVR +VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGEALSQYLEFNPAVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +Y
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIY 480
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
KN EIQ LI ALGLG+KGE+F + LRYH+++I+TDADVDGAHIRTL+LTFFYRYQK L
Sbjct: 481 KNTEIQALITALGLGIKGEEFDSKNLRYHRVVIMTDADVDGAHIRTLILTFFYRYQKELV 540
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G IY+ PPLYKVERGK YCY++ +L+ S FP A Y+IQRFKGLGEMMP QLW
Sbjct: 541 EGGYIYIACPPLYKVERGKNHTYCYNEVDLQTTLSGFPEKANYTIQRFKGLGEMMPKQLW 600
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
ETT++P RM+K++ ++DA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 601 ETTMDPSARMMKRVEVQDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
>gi|443477130|ref|ZP_21066998.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
gi|443017788|gb|ELS32155.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
Length = 646
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/647 (59%), Positives = 488/647 (75%), Gaps = 15/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V++TY + QIQVLEGLEAVRKRP MYIG+TGP+GLHHLV+E++DN+VDEA AG+ I V
Sbjct: 5 VTETYNANQIQVLEGLEAVRKRPGMYIGTTGPKGLHHLVFEVVDNSVDEALAGHCDRILV 64
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
LL D S IP D HP T KSALETVLTVLHAGGKFG GY VSGGLHGVG
Sbjct: 65 ELLPDGSVCVSDNGRGIPTDTHPKTGKSALETVLTVLHAGGKFG--DGGYKVSGGLHGVG 122
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EV+VWR Y Q+Y RG PVT L + R+GT++RF PD Q+
Sbjct: 123 ISVVNALSEWVEVSVWRLEKVYKQRYERGFPVTELIASK-SEEPIQRRGTQVRFKPDAQI 181
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FTT +F+++ +A R++ELA+LN + I D + + + Y + GG+ EYV ++
Sbjct: 182 FTTQTEFEYDILASRLKELAYLNAGVKIEF--SDRRGTEVRTDIYCYEGGIREYVAYMTR 239
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ +H D++ + D + +++ALQWC D+Y+D +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 240 EKEAIHPDIIYVNGERDNVVVEVALQWCIDSYNDNVLGFANNIRTIDGGTHLEGLKTVLT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N+ ++ K +K+ + +L+GE+VREGLT +ISV+V +PEFEGQTKT+LGN EVR +VD
Sbjct: 300 RTINATARRLKKIKEGESNLAGENVREGLTAVISVKVTDPEFEGQTKTKLGNTEVRGIVD 359
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EYLE HP V SI+ K+L A AA AA+RAR+LVR+KS L SS+LPGKLADC
Sbjct: 360 SFVGEVLNEYLEFHPAVATSIIEKALQAFNAAEAARRARELVRRKSALESSTLPGKLADC 419
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P+ESEIFIVEGDSAGGSAKQGRDR +QAILPLRGK+LN+ER D++ +YKN EIQ L
Sbjct: 420 SSRDPKESEIFIVEGDSAGGSAKQGRDRHYQAILPLRGKVLNIERADDSKIYKNNEIQAL 479
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I GLG+KGEDF + LRYHKII+L DADVDGAHIRTLLLTFFYRYQ+ L D G IY+G
Sbjct: 480 ITGCGLGIKGEDFNESQLRYHKIILLADADVDGAHIRTLLLTFFYRYQRELLDRGYIYIG 539
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVERGK QYCY D +L+ + SFP+NA Y+IQRFKGLGEMMP QLWETT+NP
Sbjct: 540 CPPLYKVERGKNAQYCYTDRDLQALLESFPANANYNIQRFKGLGEMMPQQLWETTMNPAT 599
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK+L IEDAAEA+ +F+ LMG +V R+E I+ + + + LDI
Sbjct: 600 RSLKRLTIEDAAEADRIFTILMGDKVAPRREFIETYGSKLAITELDI 646
>gi|33864631|ref|NP_896190.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
gi|33632154|emb|CAE06610.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
Length = 655
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/652 (59%), Positives = 488/652 (74%), Gaps = 18/652 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQNAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 TLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV R G + Q++ RG + +L P GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGSLASEDQPASEAGETGTTVCFKPDIEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYV 298
FT I FD+ T++ R+RELA+LN + I R E + +N+ E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDE-RESARNEVGEAHEETYFYEGGIKEYV 243
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++NT+K LH D++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+
Sbjct: 244 AYMNTEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGL 303
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EV
Sbjct: 304 KTVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEV 363
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPG
Sbjct: 364 RGIVDNLVGEGLSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPG 423
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN
Sbjct: 424 KLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNT 483
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EIQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 484 EIQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKALVEGG 543
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPLYKVERGK YCY++ +L+K SF A Y+IQRFKGLGEMMP QLWETT
Sbjct: 544 YIYIACPPLYKVERGKNHTYCYNEGDLQKTLQSFGEKANYTIQRFKGLGEMMPKQLWETT 603
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
++P R +K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 604 MDPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMTALDI 655
>gi|428309704|ref|YP_007120681.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
gi|428251316|gb|AFZ17275.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
Length = 642
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/649 (60%), Positives = 499/649 (76%), Gaps = 19/649 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+ + Q+Y RG PVT L + + R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRENRIHTQRYERGIPVTEL---IGKPSKEARTGTSVSFKPDTQI 175
Query: 244 F-TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
F TT I+FD+ T+AGR+RELA+LN + I D+ E+ + Y++ GG++EYV ++N
Sbjct: 176 FVTTGIEFDYTTLAGRVRELAYLNAGVRITF--TDNRLEQPRQETYYYEGGIQEYVAYMN 233
Query: 303 TDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+K+PLH +++ + + +G +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA L
Sbjct: 234 REKEPLHQEIIYIQGERNGTQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKAVL 293
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRT+N++ +K +K+ + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +V
Sbjct: 294 TRTMNAIARKRNKIKEGEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIV 353
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V E LTEYLE P+V D++L K++ A KAA AA+RARDLVR+KSVL SS LPGKLAD
Sbjct: 354 ESLVGEVLTEYLEFRPNVADAVLDKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLAD 413
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS P ESEIFIVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ
Sbjct: 414 CSSRDPSESEIFIVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNTEIQA 473
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
LI ALGLG+KG++F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G IY+
Sbjct: 474 LITALGLGIKGDEFDPSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYIYI 533
Query: 602 GVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKVERG+ YCY D EL ++ FPSNA Y+IQRFKGLGEMMP QLWETT+NP
Sbjct: 534 ACPPLYKVERGRNHYYCYSDRELNNLIQHEFPSNASYTIQRFKGLGEMMPTQLWETTMNP 593
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAAEA+ VF+ LMG RV R+E I+ + +NL LDI
Sbjct: 594 GTRTLKRVEIEDAAEADRVFTVLMGDRVGPRREFIETYGSRLNLTDLDI 642
>gi|298491608|ref|YP_003721785.1| DNA gyrase subunit B ['Nostoc azollae' 0708]
gi|298233526|gb|ADI64662.1| DNA gyrase, B subunit ['Nostoc azollae' 0708]
Length = 645
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/650 (60%), Positives = 502/650 (77%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP+D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD E+ Q+Y R PVT L V P + R GT I F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDNKEHLQRYERSFPVTEL--QVKPY-KEPRTGTSITFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT +I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EYV +
Sbjct: 176 FTISIEFDYITLSGRLRELAYLNAGVKIIFTDHRLELLKSDTPRIEIYEYKGGIKEYVAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP + D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSFVGEVLTEYLEFHPSIADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRY++ L ++G I
Sbjct: 476 QSLITALGLGVKGEEFDSAQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYKRALIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKVERGK +YCY + EL++ ++ P+ A Y+IQRFKGLGEMMP QLW TT+N
Sbjct: 536 YIACPPLYKVERGKNHEYCYSERELQQHIATLPTKANYNIQRFKGLGEMMPEQLWTTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PETRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|254526641|ref|ZP_05138693.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
gi|221538065|gb|EEE40518.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
Length = 655
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/657 (57%), Positives = 497/657 (75%), Gaps = 15/657 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ +IE+ L AD S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIILRADGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L + ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGLSKGELQTKK-QIGKSSKKGTTI 178
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 293
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++EYV+++N +K+ +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKESIHPEIIYVDSQRENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNIEKTDDTK 478
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 479 IYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRE 538
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L ++G IY+ PPLYKVERGK YCY++ +LK F NA Y+IQRFKGLGEMMP Q
Sbjct: 539 LVEKGFIYIACPPLYKVERGKNHNYCYNENQLKNTIEGFGENANYNIQRFKGLGEMMPKQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ ++ +++ LDI
Sbjct: 599 LWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSSNLDMASLDI 655
>gi|78780112|ref|YP_398224.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
gi|78713611|gb|ABB50788.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
Length = 655
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/657 (57%), Positives = 499/657 (75%), Gaps = 15/657 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNEYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ +IE+ L +D S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLQSDGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGVSQNVLQSKKQTKKPF-KKGTTI 178
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 293
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNKLSDGSFKEEIYLYQGG 238
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++EYVQ++N +K+ +H D++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVQYMNAEKEAIHPDIIYVDSQKENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EVR +VD + E LT+++E +P +LD +L K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKFMEFNPGILDLVLEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+
Sbjct: 419 STLPGKLADCSSRDPAESEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIEKTDDTK 478
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 479 IYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRE 538
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L ++G IY+ PPLYKVERGK +YCY++ +LK SF NA Y+IQRFKGLGEMMP Q
Sbjct: 539 LVEKGYIYIACPPLYKVERGKNHKYCYNENQLKDTIGSFGENANYNIQRFKGLGEMMPKQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ ++ +++ LDI
Sbjct: 599 LWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSSKLDMATLDI 655
>gi|157414241|ref|YP_001485107.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9215]
gi|157388816|gb|ABV51521.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9215]
Length = 655
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/657 (57%), Positives = 496/657 (75%), Gaps = 15/657 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ +IE+ L AD S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLRADGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L + ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGLSKGELQTKK-QIGKSSKKGTTI 178
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 293
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++EYV+++N +K +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKDSIHPEIIYVDSQRENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNIEKTDDTK 478
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 479 IYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRE 538
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L ++G IY+ PPLYKVERGK YCY++ +LK F NA Y+IQRFKGLGEMMP Q
Sbjct: 539 LVEKGFIYIACPPLYKVERGKNHNYCYNENQLKNTIEGFGENANYNIQRFKGLGEMMPKQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ ++ +++ LDI
Sbjct: 599 LWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSSNLDMASLDI 655
>gi|126697163|ref|YP_001092049.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9301]
gi|126544206|gb|ABO18448.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9301]
Length = 655
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/657 (57%), Positives = 499/657 (75%), Gaps = 15/657 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHL+YE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLIYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ +IE+ L AD S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLRADGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE ++VTV+RDG E++Q++ +G L S ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVKVTVYRDGSEFNQRFEKGISKGELESKKQTGKSS-KKGTTI 178
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 293
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++EYV+++N +K+ +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKESIHPEIIYVDSQKENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNIEKTDDTK 478
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+YKN EIQ+LI ALGLG+KGE+F + +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 479 IYKNTEIQSLITALGLGIKGEEFDESSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRE 538
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L ++G IY+ PPLYKVERGK YCY++ +LK F NA Y+IQRFKGLGEMMP Q
Sbjct: 539 LVEKGFIYIACPPLYKVERGKNHNYCYNENQLKDTIQGFGENANYNIQRFKGLGEMMPKQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ ++ +++ LDI
Sbjct: 599 LWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSSNLDMATLDI 655
>gi|434398522|ref|YP_007132526.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
gi|428269619|gb|AFZ35560.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
Length = 642
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/647 (59%), Positives = 497/647 (76%), Gaps = 15/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +YG++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTSSYGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP +HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 ELNADGSVRVTDDGRGIPTGIHPKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG P L + R GT + F+PD ++
Sbjct: 119 VSVVNALSEWVEVTVWRDQKIHTQRYERGIPSGDLVVQA-NIQEPQRTGTAVHFFPDTKI 177
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT I F++N +AGR+RELA+LN + I D E+ + YF+ GG++EYV ++
Sbjct: 178 FTETIHFEYNVLAGRLRELAYLNAGVKITF--TDHRIEETRQEIYFYEGGIKEYVTYMTR 235
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+PLH D++ + + +G+ I++ALQWC DA++D +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 EKEPLHQDIIYVQGEKNGVNIEVALQWCVDAFNDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N++ +K +K+ + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTINNIARKRNKIKENESNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVD 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EYLE +P V DS++ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SLVGEVLNEYLEFNPQVADSVIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P ESEIF+VEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 416 SSRDPGESEIFLVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSL 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+
Sbjct: 476 ITALGLGIKGEEFDSSQLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRELVDQGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVERG+ YCY D EL+++ FP+NA Y+IQRFKGLGEMMP QLWETT+NPE
Sbjct: 536 CPPLYKVERGRNHYYCYSDRELQQLTREFPANANYTIQRFKGLGEMMPEQLWETTMNPET 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + ++L+ LDI
Sbjct: 596 RTLKRVEIEDAAEADRIFTVLMGDRVAPRREFIETHGSRLDLNELDI 642
>gi|428303880|ref|YP_007140705.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
gi|428245415|gb|AFZ11195.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
Length = 646
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 501/651 (76%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D+H T KSALETV+T+LHAGGKFGG S LHGVG
Sbjct: 61 QINADGSVSVTDDGRGIPTDIHSRTGKSALETVMTILHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD E++Q++ RG P+ L P+ ++R GT I F PD ++
Sbjct: 119 ISVVNALSEWVEVTVWRDKKEHNQRFERGIPIGELKAQ--PI-KENRTGTSICFKPDTEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN---QYNEYFFAGGLEEYVQW 300
FT +I+FD+ TI+GR+RELA+LN + I + KN + Y + GG+ EY+ +
Sbjct: 176 FTVSIEFDYTTISGRLRELAYLNAGVKITFSDQRIHLLKNNEPKVETYCYEGGIREYITY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+NT+K+PLH+ V+ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNTEKQPLHEEVIYIQGERNNVQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N+ +K +K+ D +L GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNTTARKRNKLKEADSNLGGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E TEYL+ HP+V D+IL K++ A AA AA+RAR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEIFTEYLDFHPNVADAILEKAIQAFNAAEAARRARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSTKDPTESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L DEG I
Sbjct: 476 QALITALGLGVKGEEFDSTQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALVDEGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSS-FPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPLYKVERG+ YCY + EL K+ ++ FPSNA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 536 YIACPPLYKVERGRNHYYCYSERELTKLTTTEFPSNANYTIQRFKGLGEMMPTQLWDTTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 NPESRTLKRVEIEDAAEADRIFTVLMGDRVAPRREFIETYGSRLNLVDLDI 646
>gi|116071704|ref|ZP_01468972.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
gi|116065327|gb|EAU71085.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
Length = 655
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/651 (58%), Positives = 488/651 (74%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ I V
Sbjct: 7 VQNEYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCDRITV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 ILGADGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV R G + Q++ RG + +L + GT + F PD Q+
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGSLLSESQSEAEQGETGTTVCFLPDLQI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED----SDPEKNQYNEYFFAGGLEEYVQ 299
FT I FD+ T++ R+RELA+LN + I R E SD YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVQIVFRDEREASLSDAGDPHEEIYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N K LH D++ + DG+ ++ ALQWC+DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKAKDALHPDIIYVNSEKDGVQVEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKDADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVISLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN E
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGE+F +++LRYH+++I+TDADVDGAHIRTL+LTFFYRY++ L + G
Sbjct: 485 IQALITALGLGIKGEEFDQKSLRYHRVVIMTDADVDGAHIRTLILTFFYRYKRELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++++L+K F NA Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNESDLQKTLKGFGENAKYTIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPSTRMMKRIEIEDALEADRIFTILMGDKVAPRREFIETHSKELDMAALDI 655
>gi|78211642|ref|YP_380421.1| DNA gyrase subunit B [Synechococcus sp. CC9605]
gi|78196101|gb|ABB33866.1| DNA gyrase, B subunit [Synechococcus sp. CC9605]
Length = 655
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/651 (59%), Positives = 485/651 (74%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDRIVV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSASVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV R G + Q++ RG + L P GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGVLASESQPAAESGETGTTVCFKPDLEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I FD+ T++ R+RELA+LN + I R E D E N + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDGEGNPHEETYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH D++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 485 IQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +L+K F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEGDLQKTLEGFGEKANYTIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
>gi|186686392|ref|YP_001869588.1| DNA gyrase subunit B [Nostoc punctiforme PCC 73102]
gi|186468844|gb|ACC84645.1| DNA gyrase, B subunit [Nostoc punctiforme PCC 73102]
Length = 645
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/654 (59%), Positives = 502/654 (76%), Gaps = 26/654 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP+D H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHLQRYERGIPVTELQTKPY---KEARTGTSVTFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIA-------LRKEDSDPEKNQYNEYFFAGGLEE 296
FTT+I+FD+ T++GR+RELA+LN + I L K D+ P+ YN + GG++E
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVKITFTDNRLELLKSDT-PKVESYN---YKGGIKE 231
Query: 297 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
Y+ ++N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRT+DGGTH+E
Sbjct: 232 YIAYMNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLE 291
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G+KA LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN
Sbjct: 292 GLKAVLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNT 351
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR +VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS L
Sbjct: 352 EVRGIVDSLVGEVLTEYLEFHPAIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPL 411
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YK
Sbjct: 412 PGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYK 471
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N E+Q+LI ALGLGVKG++F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L +
Sbjct: 472 NNEVQSLITALGLGVKGDEFDSNQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLIE 531
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
+G IY+ PPL+KVERG+ +YCY D E + + FP+NA Y+IQRFKGLGEMMP QLW+
Sbjct: 532 QGFIYIACPPLFKVERGRNHEYCYSDREKNQAIAKFPANANYTIQRFKGLGEMMPQQLWD 591
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +N LDI
Sbjct: 592 TTMNPETRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNFTDLDI 645
>gi|443321835|ref|ZP_21050875.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
gi|442788451|gb|ELR98144.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
Length = 640
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/647 (59%), Positives = 496/647 (76%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGL+ VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IE+
Sbjct: 1 MTSSYSAEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 ELNEDGSCSVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+ + Q+Y RG PVT L P +++QGT + F PD ++
Sbjct: 119 ISVVNALSEWVEVTVWREKKVHTQRYERGIPVTELISEPHP---ENQQGTSVSFLPDAEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ +FD+NT+AGR++ELA+LN + I PE+ + Y + GG+ EYV ++
Sbjct: 176 FSETREFDYNTLAGRLKELAYLNAGVKITFSDRRQTPERVE--AYCYEGGIREYVTYMTR 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+PLH D++ + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 234 EKEPLHKDIIYVSGERNDVQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N++ +K +K+ + +L+GE+VREGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTINTVARKRNKIKENEANLAGENVREGLTGVVSVKVPDPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L+EYLE +P V DS++ K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLSEYLEFNPHVADSVIDKAIQAFKAAEAARNARELVRRKSVLESSPLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ P ESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN EIQ+L
Sbjct: 414 STRDPAESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNNEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F ALRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+
Sbjct: 474 ITALGLGIKGEEFDASALRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERG+ YCY D EL++ ++FP NA Y+IQRFKGLGEMMP QLWETT+NPE
Sbjct: 534 CPPLYKIERGRNHYYCYSDRELQQQLATFPPNASYNIQRFKGLGEMMPAQLWETTMNPES 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 594 RTLKRIEIEDAAEADRIFTVLMGDRVAPRREFIETHGSRLNLVDLDI 640
>gi|75908731|ref|YP_323027.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
gi|75702456|gb|ABA22132.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
Length = 645
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/650 (60%), Positives = 496/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHIQRYERGIPVTELIAKPY---KEARTGTSVSFKPDSQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT +I+FD+ T++ R+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTNSIEFDYITLSSRLRELAYLNAGVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNTIARKRNKIKENEANLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP + D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D++ +YKN EI
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYH+III+TDADVDGAHIRTL+LTFFYRYQ+ L ++G I
Sbjct: 476 QALITALGLGVKGEEFDSTQLRYHRIIIMTDADVDGAHIRTLILTFFYRYQRALIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKVERG+ +YCY + +L++ + FP+NA Y+IQRFKGLGEMMP QLW TT+N
Sbjct: 536 YIACPPLYKVERGRNYEYCYSERDLQQAIAKFPANANYTIQRFKGLGEMMPEQLWTTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PETRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|119512311|ref|ZP_01631397.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
gi|119463024|gb|EAW43975.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
Length = 645
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/650 (60%), Positives = 496/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D H T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHSRTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
LSVVNALS+ LEVTVWRD + Q+Y RG PVT L D + + GT I F PD Q+
Sbjct: 119 LSVVNALSDVLEVTVWRDNKVHVQRYERGVPVTELQA---KPDKEGKTGTSINFKPDSQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
F +++FD+ TIAGR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FINSVEFDYITIAGRLRELAYLNAGVKIIFGDHRLELLKSDTPRIETYEYKGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH+ ++ + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVHGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E L+EYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLSEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLGVKG++F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G I
Sbjct: 476 QSLITALGLGVKGDEFDSTQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPL+KVERGK +YCY + EL++ + PSNA Y+IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLFKVERGKNHEYCYSERELQQYLGTLPSNANYNIQRFKGLGEMMPQQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +N LDI
Sbjct: 596 PESRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNFTDLDI 645
>gi|354567214|ref|ZP_08986384.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
gi|353543515|gb|EHC12973.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
Length = 645
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/650 (60%), Positives = 491/650 (75%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY +++EV
Sbjct: 1 MTSSYSAEQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP + T KS LETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTGIVAKTGKSGLETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG PVT L V P R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRDKKVHTQRYERGIPVTELI--VKPYKDH-RTGTSVSFLPDSQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT +FD T+A R+RELA+LN + I R + ++ + Y + GG+ EY+ +
Sbjct: 176 FTTGTEFDFTTLASRLRELAYLNAGVKITFTDHRLQLLKSDQPKVETYEYKGGIREYITY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH+ V+ + + + + +++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 INADKQPLHEEVIYVQGERNNVQVEVALQWCTDAYTDNILGFANNIRTVDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +KD + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKLKDSEPNLSGEHVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP V D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGETLTEYLEFHPSVADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEI++VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPRESEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G +
Sbjct: 476 QSLITALGLGVKGEEFDASQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGYV 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERGK +YCY D E + S P NA Y+IQRFKGLGEMMP QLW TT+N
Sbjct: 536 YIACPPLYKIERGKNYKYCYSDREKDQYISQLPENANYTIQRFKGLGEMMPEQLWSTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PETRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLKDLDI 645
>gi|434386573|ref|YP_007097184.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
gi|428017563|gb|AFY93657.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
Length = 645
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/650 (58%), Positives = 495/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG + I+VLEGLEAVR RP MYIGSTGP+GLHHLVYE+ DN++DEA AG+ NI++
Sbjct: 1 MTSDYGDDNIRVLEGLEAVRVRPGMYIGSTGPKGLHHLVYEVADNSIDEALAGHCKNIDI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++ A+ S IP ++P T KS +ETVLTVLHAGGKFG GY+VSGGLHGVG
Sbjct: 61 SINANGSVTVIDDGRGIPAGINPQTGKSTIETVLTVLHAGGKFG--DGGYTVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS +EV VWR+ + Q++ +G V+ L V+P ++R GT + F PD ++
Sbjct: 119 ISVVNALSSHVEVKVWRNQKIHTQRFEKGFAVSGL--EVMP-SPENRTGTTVTFQPDPEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
F + +FD T+A R +ELA+LN + I+ R E ++ + Y+F GG+ EYV +
Sbjct: 176 FKESTEFDFATLASRFKELAYLNAGIRISFSDYRLELLGTDEPKVENYYFEGGIREYVSY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN +K+PLH+ ++ ++ D + +++ALQWC DAYSD +LG+AN+IRTIDGGTH++G+K
Sbjct: 236 LNENKQPLHEEIIYISQEQDKVQVEVALQWCVDAYSDNILGFANNIRTIDGGTHLDGLKV 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+NS+ +K +K+ D +L GE++REGLT I+SV+VPNPEFEGQTKT+LGN EVRK
Sbjct: 296 VLTRTMNSIARKRNKLKEGDANLGGENIREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRK 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE P++ D+IL K++ A AA AA+RA++LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSIVSEALTEYLEFRPNIADAILDKAIQAFNAAEAARRAKELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSKDPSESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGEDFK E LRYH+I ++TDADVDGAHIRTLLLTFFYRYQ++L DEG +
Sbjct: 476 QALITALGLGVKGEDFKSEQLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRSLIDEGYV 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERG+ YCY + EL++ + FP+NA Y+IQRFKGLGEMMP QLWETT++
Sbjct: 536 YIACPPLYKLERGRNHYYCYSERELQQKIAEFPANANYTIQRFKGLGEMMPQQLWETTMD 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
E R LK++ I+DAAEA+ +F+ LMG RV R+E I+ + L LDI
Sbjct: 596 RETRTLKRVEIQDAAEADRIFTILMGDRVAPRREFIETYGPKLGLMDLDI 645
>gi|427711338|ref|YP_007059962.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
gi|427375467|gb|AFY59419.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
Length = 640
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/647 (58%), Positives = 495/647 (76%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y + Q++VL+GLE VR RP MYIG+TGP+GLHHLVYE++DN+VDEA AGY +++ +
Sbjct: 1 MSLDYNAAQLRVLKGLEPVRTRPGMYIGTTGPKGLHHLVYEVVDNSVDEALAGYCNHVLI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP D+HP T S +ETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 QMNHDGSVTVTDDGRGIPTDIHPDTGLSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LEV VWR+ + Q+Y RG P+T L P +++R+GT + F+PD+Q+
Sbjct: 119 VSVVNALSEWLEVKVWRNNTVFTQRYERGVPMTALEPS--PA-TENRRGTSVTFFPDRQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT I+F+ + R+RELA+LN + I D+ E Q Y + GG+ EY+Q++
Sbjct: 176 FTETIEFEAKILTNRLRELAYLNAGIRIEFI--DARGEIPQSEVYCYEGGIREYIQYMIQ 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
DK+PLH +++ + + + + +++ALQWCSDAY+++++G+AN+IRT +GGTH+EG+KA LT
Sbjct: 234 DKEPLHPEMIYVQGEKNDVQVEVALQWCSDAYNESLMGFANNIRTNEGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLNS+ +K +K+ D +L+GE++REGLT I+SV+VPNPEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNSIARKRNKLKEGDSNLAGENIREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEYL+ P D+IL K++ A AA AA+RAR++VR+KSVL SS+LPGKLADC
Sbjct: 354 SVVGEALTEYLDFRPQAADAILEKAIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI L
Sbjct: 414 SSRDPSESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIHAL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGEDF LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+
Sbjct: 474 ITALGLGIKGEDFDSSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERG+Q YCY+D +L++ +SFP NA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 534 CPPLYKLERGRQHYYCYNDRQLQERIASFPENANYTIQRFKGLGEMMPQQLWDTTMNPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
RM+K++ IEDAAEA+ +F+ LMG RV R+E I+ + L HLDI
Sbjct: 594 RMMKRVEIEDAAEADRMFTILMGDRVAPRREFIETYGPKLALAHLDI 640
>gi|434394941|ref|YP_007129888.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
gi|428266782|gb|AFZ32728.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
Length = 646
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/654 (60%), Positives = 500/654 (76%), Gaps = 25/654 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDTHPQTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q++ RG PVT L V P + + GT + F PD +
Sbjct: 119 ISVVNALSEWIEVTVWRDKHVHVQRFERGIPVTEL--QVKP-SKEAKTGTSVTFQPDATI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRK----EDSDPEKNQYNEYFFAGGLEEY 297
FTT +FD+ T+AGR+RELA+LN K+T + R+ + S+P+ Y + GG++EY
Sbjct: 176 FTTGTEFDYITLAGRLRELAYLNAGVKITFSDRRLELLKSSEPKVETYE---YKGGIKEY 232
Query: 298 VQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V ++N +K+PLH+ + F + + + + +++ALQW DAY+D +LG+AN+IRT+DGGTH+EG
Sbjct: 233 VAYMNREKQPLHEEIIFVQGERNNVQVEVALQWSVDAYTDNILGFANNIRTVDGGTHLEG 292
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+KA LTRTLN++ +K +KD + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN E
Sbjct: 293 LKAVLTRTLNAIARKRNKIKDNEPNLSGEHVREGLTGVISVKVPDPEFEGQTKTKLGNTE 352
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR +VD V E LTEYL+ HP+V DS+L K++ A KAA AA+ AR+LVR+KSVL SS LP
Sbjct: 353 VRGIVDSLVGEVLTEYLDFHPNVADSVLDKAIQAFKAAEAARHARELVRRKSVLESSPLP 412
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN
Sbjct: 413 GKLADCSSRDASESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKN 472
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EIQ LI ALGLGVKGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+
Sbjct: 473 TEIQALITALGLGVKGEEFDASQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRELIDQ 532
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G IY+ PPL+KVERG+ YCY D EL+ ++ FP NA Y+IQRFKGLGEMMP QLWE
Sbjct: 533 GYIYIACPPLFKVERGRSHYYCYSDRELQNLIQHEFPDNANYTIQRFKGLGEMMPDQLWE 592
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 593 TTMNPETRTMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSRLNLTELDI 646
>gi|428771456|ref|YP_007163246.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
gi|428685735|gb|AFZ55202.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
Length = 649
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/646 (60%), Positives = 491/646 (76%), Gaps = 16/646 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y +EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 10 SSNYDAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEID 69
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L AD S IP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+
Sbjct: 70 LNADGSVSVTDDGRGIPTDIHPRTKKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGI 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE ++VTVWR + Q+Y RGKP+T L D+ GT + F PD Q+F
Sbjct: 128 SVVNALSEWVQVTVWRKDKVHTQRYERGKPITDLETK--DNDTGHSTGTSVSFLPDNQIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD+N ++ R+RELA+LN + I + PE+ + Y + GG++EYV ++ +
Sbjct: 186 TETTEFDYNLLSNRLRELAYLNAGVKITFTDKRVTPEREE--TYCYEGGIKEYVTYMTRE 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ LH D++ + +G+ +++ALQWC DAYSDT+LG+AN+IRTIDGGTH+EG+K LTR
Sbjct: 244 KEVLHQDIIYTSGEKNGVQVEVALQWCIDAYSDTILGFANNIRTIDGGTHLEGLKTVLTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN++G+K +K+ D +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 304 TLNNIGRKRNKIKENDSNLGGENVREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIVDS 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L EYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS
Sbjct: 364 LVGEALNEYLEFNPHVADSIIEKAIQAFKAAEAARRARELVRRKSVLESSPLPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P ESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI
Sbjct: 424 SRDPAESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLI 483
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALGLG+KG++F LRYH I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+
Sbjct: 484 TALGLGIKGDEFDASQLRYHHIVIMTDADVDGAHIRTLLLTFFYRYQRELVEQGYIYIAC 543
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ERGK YCY D EL++ + FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R
Sbjct: 544 PPLYKLERGKNHFYCYSDRELQQKIAEFPPNANYNIQRFKGLGEMMPEQLWDTTMNPETR 603
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
M+K++ IEDAAEA+ +F+ LMG RV R+E I+ +NL LD+
Sbjct: 604 MMKRVEIEDAAEADRIFTVLMGDRVAPRREFIETHGPRLNLTELDV 649
>gi|260436552|ref|ZP_05790522.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
gi|260414426|gb|EEX07722.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
Length = 655
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/651 (59%), Positives = 484/651 (74%), Gaps = 16/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDRILV 66
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSAAVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE ++VTV R G + Q++ RG + L P GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGELASESQPAAESGETGTTVCFKPDLEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 299
FT I FD+ T++ R+RELA+LN + I R E D E + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDEEGKPHEETYFYEGGIKEYVA 244
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K LH +++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKEKDALHPEIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVISLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E
Sbjct: 425 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTE 484
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ LI ALGLG+KGEDF + LRYH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G
Sbjct: 485 IQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGY 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERGK YCY++ +L+K F A Y+IQRFKGLGEMMP QLWETT+
Sbjct: 545 IYIACPPLYKVERGKNHTYCYNEGDLQKTLEGFGEKANYTIQRFKGLGEMMPKQLWETTM 604
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+P R +K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 605 DPTTRTMKRVEIEDAIEADRIFTILMGDKVAPRREFIETHSAELDMAALDI 655
>gi|119487794|ref|ZP_01621303.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
gi|119455627|gb|EAW36764.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
Length = 645
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/650 (60%), Positives = 495/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
AD S IP+D+H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DFNADGSVTVTDDGRGIPVDVHSKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EV V RD +Y Q+Y RG PV L P K + GT ++F PD +
Sbjct: 119 VSVVNALSEWVEVQVLRDETQYTQRYQRGVPVDELQSK--PSQGK-QTGTSVQFLPDTTI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP---EKNQYNEYFFAGGLEEYVQW 300
FTT I+FD+ TIA R+RELA+LN + I L D E+ + + + GG+ EY+ +
Sbjct: 176 FTTGIEFDYATIANRLRELAYLNAGVRITLTDNRLDLIQLEEAKTESFCYEGGIREYIAY 235
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH DV+ + + + I++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEDVIYVSGERNNVQIEVALQWCVDAYSDNILGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N+ +K +K+ + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNNFARKRNKLKENESNLGGENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYL+ HP + D++L K++ A KAA AA+RARDLVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFHPHIADAVLEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P ESEIF+VEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D++ +YKN EI
Sbjct: 416 ADCSTRIPAESEIFLVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG++GEDF LRYHKIII+TDADVDGAHIRTLLLTFFYRYQ+ L ++G I
Sbjct: 476 QSLITALGLGIRGEDFDSSQLRYHKIIIMTDADVDGAHIRTLLLTFFYRYQRELVEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKVERG+ YCY+D EL++ + FPSNA Y+IQRFKGLGEMMP QLW TT+N
Sbjct: 536 YIACPPLYKVERGRNHYYCYNDRELQERLAEFPSNANYNIQRFKGLGEMMPEQLWNTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE RM+KQ+ +EDAA+A+ VF+ LMG RV R+E I+ A +NL LDI
Sbjct: 596 PETRMIKQVEVEDAAQADNVFTVLMGDRVAPRREFIETNAPRLNLVDLDI 645
>gi|123969376|ref|YP_001010234.1| DNA gyrase subunit B [Prochlorococcus marinus str. AS9601]
gi|123199486|gb|ABM71127.1| DNA gyrase, subunit B [Prochlorococcus marinus str. AS9601]
Length = 655
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/657 (57%), Positives = 495/657 (75%), Gaps = 15/657 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+ +IE+ L AD S IP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLRADGSAFISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGVSKGELQAKK-QTGKPFKKGTSI 178
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 293
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++EYV+++N +K +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKDSIHPEIIYVDSQKENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPAILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILN+E+ D+
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNIEKTDDTK 478
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+YKN EIQ+LI ALGLG+KGE+F + +LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+
Sbjct: 479 IYKNTEIQSLITALGLGIKGEEFDESSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRE 538
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L ++G IY+ PPLYKVERGK YCY++ +LK F NA Y+IQRFKGLGEMMP Q
Sbjct: 539 LVEKGFIYIACPPLYKVERGKNHNYCYNENQLKDTIQGFGENANYNIQRFKGLGEMMPKQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+E I+ + +++ LDI
Sbjct: 599 LWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSGNLDMATLDI 655
>gi|218246132|ref|YP_002371503.1| DNA gyrase subunit B [Cyanothece sp. PCC 8801]
gi|257059181|ref|YP_003137069.1| DNA gyrase subunit B [Cyanothece sp. PCC 8802]
gi|218166610|gb|ACK65347.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8801]
gi|256589347|gb|ACV00234.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8802]
Length = 641
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/643 (60%), Positives = 494/643 (76%), Gaps = 17/643 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + +
Sbjct: 6 YGAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINS 65
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 66 DGSVTVTDDGRGIPTDIHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE + VTVWR+G + Q+Y RG PVT+L + P S GT I F PD ++F+
Sbjct: 124 NALSEWVNVTVWREGNIHTQRYERGNPVTSLAANPDPDHST---GTSISFLPDIEIFSGG 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I+FD+NT++GR+RELA+LN + I D+ P + Y + GG++EYV ++ DK
Sbjct: 181 IEFDYNTLSGRLRELAYLNAGVKITFT--DNRPAEIHQETYCYEGGIKEYVAYMCRDKDA 238
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH D++ + +G+ I++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N
Sbjct: 239 LHQDIIYVSGEKNGVQIEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTIN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ +K +K+ + +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 299 NVARKRNKIKENEANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVG 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L EYLE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+
Sbjct: 359 EVLNEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRD 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI AL
Sbjct: 419 PEESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITAL 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
GLG+KGE+F LRYH+++I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPL
Sbjct: 479 GLGIKGEEFDPSQLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRELVDQGYVYIACPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKVERG+ YCY++ EL++ +S P+NA Y+IQRFKGLGEMMP QLWETT+NPE R +K
Sbjct: 539 YKVERGRNHVYCYNERELQEHLNSLPANANYTIQRFKGLGEMMPTQLWETTMNPETRTMK 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
++ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 599 RVEIEDAAEADRIFTVLMGDRVAPRREFIETYGPKLNLTDLDI 641
>gi|434405383|ref|YP_007148268.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
gi|428259638|gb|AFZ25588.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
Length = 646
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/651 (60%), Positives = 498/651 (76%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+ + Q+Y RG VT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWREKKVFTQRYERGAAVTELQAKSY---KEARTGTSVTFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT+I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVKITFTDHRLELLKSDTAKVETYEYKGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNREKLPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE P V DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPGVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSTRDPSESEIYIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKG++F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G I
Sbjct: 476 QALITALGLGVKGDEFDAAQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFI 535
Query: 600 YVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPL+KVERG+ +YCY D EL++ ++FPSNA Y+IQRFKGLGEMMP QLW TT+
Sbjct: 536 YIACPPLFKVERGRSDPKYCYSDRELQQHIATFPSNANYNIQRFKGLGEMMPAQLWTTTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 NPETRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 646
>gi|172035674|ref|YP_001802175.1| DNA gyrase subunit B [Cyanothece sp. ATCC 51142]
gi|354554914|ref|ZP_08974217.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
gi|171697128|gb|ACB50109.1| DNA gyrase B subunit [Cyanothece sp. ATCC 51142]
gi|353553068|gb|EHC22461.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
Length = 642
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/643 (60%), Positives = 491/643 (76%), Gaps = 17/643 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ +
Sbjct: 7 YGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINP 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP D+HP+T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSVTVTDDGRGIPTDIHPSTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE + V VWRD + Q+Y RG P+T L D GT I F PDK++FT
Sbjct: 125 NALSEWVIVKVWRDDEVHTQRYERGIPITNLETKP---DKNHSTGTSISFLPDKKIFTVG 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I+FD++T+AGR+RELA+LN + I D+ E+ Y + GG++EYV ++ DK P
Sbjct: 182 IEFDYSTLAGRLRELAYLNAGVRITF--TDNRKEEPHVESYCYEGGIKEYVTYMCRDKDP 239
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N
Sbjct: 240 LHQDIIFVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ +K +KD D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 300 NVARKRNKLKDNDANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVG 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E LTEYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+
Sbjct: 360 EVLTEYLEFNPHVADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI AL
Sbjct: 420 PEESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKIINIEKTDDARIYKNNEIQSLITAL 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
GLG+KGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPL
Sbjct: 480 GLGIKGEEFDPAQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALVDQGYVYIACPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKVERG+ YCY++ +L++ +S P+NA YSIQRFKGLGEMMP QLW+TT+NPE R +K
Sbjct: 540 YKVERGRNHVYCYNERQLQEHINSLPANANYSIQRFKGLGEMMPTQLWDTTMNPETRRMK 599
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
Q+ IEDAAEA+ +F+ LMG RV R+E I+ ++L+ LDI
Sbjct: 600 QVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLDLNDLDI 642
>gi|126660369|ref|ZP_01731481.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
gi|126618342|gb|EAZ89099.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
Length = 642
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/643 (60%), Positives = 491/643 (76%), Gaps = 17/643 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ +
Sbjct: 7 YGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINP 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP D+HP+T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSVTVTDDGRGIPTDVHPSTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE + V VWRD + Q+Y RG P+T+L D GT I F PDK +FT
Sbjct: 125 NALSEWVIVKVWRDDQVHTQRYERGVPITSLETKA---DKDHSTGTSISFLPDKTIFTVG 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD++T+AGR+RELA+LN + I D+ E+ Y + GG++EYV ++ DK P
Sbjct: 182 TEFDYSTLAGRLRELAYLNAGVKITF--TDNRKEEPHIESYCYEGGIKEYVTYMCRDKDP 239
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N
Sbjct: 240 LHQDIIFVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ +K +KD D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 300 NVARKRNKLKDNDSNLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVG 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+EYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+
Sbjct: 360 EVLSEYLEFNPHVADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI AL
Sbjct: 420 PEESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKIINIEKTDDARIYKNNEIQSLITAL 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
GLG+KGE+F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G +Y+ PPL
Sbjct: 480 GLGIKGEEFDSSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIACPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKVERG+ YCY++ +L++ +S P+NA YSIQRFKGLGEMMP QLW+TT+NPE R +K
Sbjct: 540 YKVERGRNHVYCYNERQLQEHINSLPANANYSIQRFKGLGEMMPTQLWDTTMNPETRRMK 599
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
Q+ IEDAAEA+ +F+ LMG RV R+E I+ ++L+ LDI
Sbjct: 600 QVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLDLNDLDI 642
>gi|67920055|ref|ZP_00513575.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
gi|67857539|gb|EAM52778.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
Length = 642
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/647 (60%), Positives = 495/647 (76%), Gaps = 25/647 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + A
Sbjct: 7 YGAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINA 66
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P D+HP T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSITVTDNGRGIPTDVHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE + V VWRD + Q+Y RG P+ +L D K GT + F PD Q+F+
Sbjct: 125 NALSEWVVVNVWRDNNIHTQRYERGIPLGSLDTKP---DKKHSTGTSVSFLPDIQIFSGG 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 303
I+FD++T+AGR++ELA+LN + I RKE+ YNE Y + GG++EYV ++
Sbjct: 182 IEFDYSTLAGRLKELAYLNAGVKITFTDHRKEEP------YNETYCYEGGIKEYVTYMCR 235
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
DK PLH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 DKDPLHQDIIYVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N++ +K +K+ D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTMNNVARKRNKLKENDANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEYLE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SLVGEVLTEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+L
Sbjct: 416 SSRDPEESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQSL 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F E LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G +Y+
Sbjct: 476 ITALGLGIKGEEFDSEQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVERG+ YCY++ +L++ +S P+NA Y+IQRFKGLGEMMP QLWETT+NPE
Sbjct: 536 CPPLYKVERGRNHMYCYNERQLQEHINSLPNNANYTIQRFKGLGEMMPTQLWETTMNPET 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 596 RSMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLNLTDLDI 642
>gi|443654055|ref|ZP_21131209.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
gi|443333902|gb|ELS48439.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
Length = 616
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/623 (60%), Positives = 479/623 (76%), Gaps = 17/623 (2%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPA 147
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD S IP D+HP
Sbjct: 1 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPT 60
Query: 148 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 207
T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q
Sbjct: 61 TGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQ 118
Query: 208 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 267
+Y RG PVT L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN
Sbjct: 119 RYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNA 175
Query: 268 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 326
+ I D E+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A
Sbjct: 176 GVKITF--SDYRAEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVA 233
Query: 327 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 386
QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 234 FQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 293
Query: 387 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 446
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 294 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEK 353
Query: 447 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 506
++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQ
Sbjct: 354 AVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQ 413
Query: 507 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 566
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+
Sbjct: 414 GRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIV 473
Query: 567 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 626
++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++
Sbjct: 474 LMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQ 533
Query: 627 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 686
+ FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG
Sbjct: 534 KIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGD 593
Query: 687 RVDTRKELIQNAANLVNLDHLDI 709
RV R+E I+ +NL LDI
Sbjct: 594 RVAPRREFIETHGPRLNLTDLDI 616
>gi|443318324|ref|ZP_21047579.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
gi|442782062|gb|ELR92147.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
Length = 646
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/651 (59%), Positives = 499/651 (76%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AGY S+IEV
Sbjct: 1 MATNYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGYCSHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L A+ S IP D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 TLNANGSVSVSDDGRGIPTDIHPRTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+ ++ Q++ RG V+ +P D+ R+GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVWREQRKHTQRFERG--VSMGDLQSVP-DNSGRRGTLVSFSPDATI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIA---LRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT +F++ TI+ R+RELA+LN + + LR + ++ + +++ GG+ EYV +
Sbjct: 176 FTTGTEFEYGTISNRLRELAYLNAGVDVTFTDLRLDVLKSDQPLVSRFYYEGGIREYVAY 235
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH D++ + + DG+ ++ ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 INNDKQPLHEDIIHVQSEKDGVQVEAALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN+L +K KD + +LSGE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNTLARKRSKRKDGESNLSGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+V+ + E LTEYL+ HP++ D+IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVESVIGETLTEYLDFHPNIGDAILDKAIQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN E+
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIEKTDDAKIYKNTEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLG+KGE+F LRYH+I ++TDADVDGAHIRTLLLTFFYRYQ+ L D+G +
Sbjct: 476 QALITALGLGIKGEEFDVSQLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRALIDQGYV 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPLYK+ERG+ YCY D E + +++ FP+NA Y+ QRFKGLGEMMP QLWETT+
Sbjct: 536 YIACPPLYKIERGRNHWYCYSDRERDQLIQNEFPANANYTTQRFKGLGEMMPTQLWETTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ +NL+ LDI
Sbjct: 596 NPESRTLKKVEIEDAAEADRIFTVLMGDRVAPRREFIEKYGPRLNLEDLDI 646
>gi|416374474|ref|ZP_11683197.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
gi|357266694|gb|EHJ15286.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
Length = 642
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/647 (60%), Positives = 495/647 (76%), Gaps = 25/647 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + A
Sbjct: 7 YGAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINA 66
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P D+HP T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSITVTDNGRGIPTDVHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE + V VWRD + Q+Y RG P+ +L D K GT + F PD Q+F+
Sbjct: 125 NALSEWVVVNVWRDNNIHTQRYERGIPLGSLDTKP---DKKHSTGTSVSFLPDIQIFSGG 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 303
I+FD++T+AGR++ELA+LN + I RKE+ YNE Y + GG++EYV ++
Sbjct: 182 IEFDYSTLAGRLKELAYLNAGVKITFTDHRKEEP------YNETYCYEGGIKEYVTYMCR 235
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
DK PLH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 DKDPLHQDIIYVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N++ +K +K+ D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTMNNVARKRNKLKENDANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEYLE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SLVGEVLTEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+L
Sbjct: 416 SSRDPEESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQSL 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F E LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G +Y+
Sbjct: 476 ITALGLGIKGEEFDSEQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVERG+ YCY++ +L++ +S P+NA Y+IQRFKGLGEMMP QLWETT+NPE
Sbjct: 536 CPPLYKVERGRNHVYCYNERQLQEHINSLPNNANYTIQRFKGLGEMMPTQLWETTMNPET 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R +KQ+ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 596 RSMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLNLTDLDI 642
>gi|428301860|ref|YP_007140166.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
gi|428238404|gb|AFZ04194.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
Length = 645
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/650 (59%), Positives = 492/650 (75%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++++V
Sbjct: 1 MTTDYGAEQIQVLEGLEHVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVDV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP+D H T KSALETVLTVL AGGKFGG S Y VSGGLHGVG
Sbjct: 61 ELNPDGSCGVKDDGRGIPVDTHTKTGKSALETVLTVLGAGGKFGGGS--YKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVN LSE L+VT+WRD Y Q+Y RG L + R GT I+F PD +
Sbjct: 119 VSVVNGLSEWLDVTIWRDKKVYTQRYERGVAQAELKNQPY---KEARTGTAIKFKPDDTI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT +FD+ T++ R+RELA+LN + I R E + + Y + GG+ EYV +
Sbjct: 176 FTTGTEFDYTTLSSRLRELAYLNAGVRITFADNRLELLKSDTPRLETYEYKGGIREYVAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+ H+ ++ + + + +++ALQWCSDAYSD +LG+AN+IRT+DGGTH+EG+K
Sbjct: 236 MNADKQAQHEEIIYVQGERHNVQVEVALQWCSDAYSDNVLGFANNIRTVDGGTHLEGLKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP V DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDTLVGEVLTEYLEFHPGVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P ESEI++VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN EI
Sbjct: 416 ADCSTRDPAESEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLGV+G++F LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G I
Sbjct: 476 QSLITALGLGVRGDEFDATQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALVEQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERG+ QYCY D EL++ S FP NA Y+IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLYKLERGRNHQYCYSDRELQQKISEFPDNANYTIQRFKGLGEMMPQQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE+R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +N+ LDI
Sbjct: 596 PERRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNMLDLDI 645
>gi|209525244|ref|ZP_03273786.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|423065151|ref|ZP_17053941.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
gi|209494259|gb|EDZ94572.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|406713283|gb|EKD08454.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
Length = 645
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/651 (60%), Positives = 502/651 (77%), Gaps = 20/651 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 1 MTSTYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNS IPID H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EINPDNSVRVTDDGRGIPIDTHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQ 242
+SVVNALSE +EVTV RD Y Q+Y RG PVT + H SK+ Q GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVLRDHKRYVQRYERGVPVTEVKEH----SSKETQTGTSVCFKPDTK 174
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 299
+FTT I+F+++TIA R+RELA+LN + I L R E E+ + Y + GG++EYV
Sbjct: 175 IFTTGIEFEYDTIASRLRELAYLNAGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVT 234
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K+ LH D + + + + +++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K
Sbjct: 235 YMNREKQALHEDTIYVSGERNNVQVEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLK 294
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRT+N++ +K +KD + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 295 TVLTRTMNAIARKRNKIKDNEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVR 354
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E LTE+L+ +P+V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGK
Sbjct: 355 GIVDSLVGEVLTEFLDFNPNVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGK 414
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS PEESEIF+VEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E
Sbjct: 415 LADCSSRDPEESEIFLVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNE 474
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ+LI ALGLG+KGE+F LRYHK+II+TDADVDGAHIRTLLLTFFYRYQ+ L D+G
Sbjct: 475 IQSLITALGLGIKGEEFDPSQLRYHKVIIMTDADVDGAHIRTLLLTFFYRYQRELVDQGF 534
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERG+ YCY++ +L++ + FP NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 535 IYIACPPLYKVERGRNHYYCYNEQQLQQQLAEFPDNANYTIQRFKGLGEMMPNQLWDTTM 594
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R +K++ IEDAAEA+ +F+ LMG RV R++ I++ A +++ LDI
Sbjct: 595 NPETRSIKRVEIEDAAEADHIFTVLMGDRVAPRRQFIEDHAPRLDITDLDI 645
>gi|411117920|ref|ZP_11390301.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
gi|410711644|gb|EKQ69150.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
Length = 645
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/650 (60%), Positives = 491/650 (75%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEG+E VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY NI+V
Sbjct: 1 MTNNYGAEQIQVLEGIEHVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKNIDV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L + S IP +H T KSALETVLT L AGGKFG Y VSGGLHGVG
Sbjct: 61 TLNDNGSVTVVDDGRGIPTGIHSRTGKSALETVLTKLGAGGKFGEGGG-YKVSGGLHGVG 119
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRDG + Q++ RG P + + DR GT + F PD +
Sbjct: 120 ISVVNALSEWVEVTVWRDGKIHTQRFERGIPKGDMQVES---GAGDRTGTSVTFLPDSTI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT I FD+ T+AGR+RELAFLN + I R++ + + + YF+ GG+ EYV +
Sbjct: 177 FTGGIVFDYATLAGRLRELAFLNGGVRITFTDNRRDSPESGEPRTETYFYEGGIREYVTY 236
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH+ ++ + + + + +++ALQW +DAY+D +LG+AN+IRTIDGGTH+EG+K
Sbjct: 237 MNREKQPLHEEIIYIQGERNNVQVEVALQWSADAYTDNLLGFANNIRTIDGGTHLEGLKT 296
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLNSL +K +KD D L+GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 297 VLTRTLNSLARKRNKLKDDD-KLAGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE P V D+I+ K+L A +AA AA++AR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPSVADAIIEKALEAFRAAEAARKARELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLG+KGE+F+ LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ + D+G +
Sbjct: 476 QALITALGLGIKGEEFEPSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRAMVDQGFV 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERG+ YCY D E ++ SSFP NA Y IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLYKIERGRNHYYCYSDRERDQITSSFPENAKYEIQRFKGLGEMMPQQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LK++ IEDAAEA+ F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 PETRTLKRVEIEDAAEADRTFTVLMGDRVAPRREFIETHGSKLNLTDLDI 645
>gi|409993293|ref|ZP_11276439.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
gi|291569892|dbj|BAI92164.1| DNA gyrase B subunit [Arthrospira platensis NIES-39]
gi|409935828|gb|EKN77346.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
Length = 645
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/651 (60%), Positives = 501/651 (76%), Gaps = 20/651 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 1 MTSTYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNS IPID H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINPDNSVRVTDDGRGIPIDTHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQ 242
+SVVNALSE +EVTV RD Y Q+Y RG PVT L H SK+ Q GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVLRDHKRYVQRYERGVPVTELEEH----SSKESQTGTSVCFKPDTK 174
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 299
+FTT I+F+++TIA R+RELA+LN + I L R E E+ + Y + GG++EYV
Sbjct: 175 IFTTGIEFEYDTIASRLRELAYLNAGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVT 234
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K+ LH D + + + + +++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K
Sbjct: 235 YMNREKQALHEDTIYVSGERNNVQVEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLK 294
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRT+N++ +K +KD + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 295 TVLTRTMNAIARKRNKIKDNEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVR 354
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E LTE+L+ +P+V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGK
Sbjct: 355 GIVDSLVGEVLTEFLDFNPNVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGK 414
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS PEESEIF+VEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E
Sbjct: 415 LADCSSRDPEESEIFLVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNE 474
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ+LI ALGLG+KGE+F LRYHK+II+TDADVDGAHIRTLLLTFFYRYQ+ L +G
Sbjct: 475 IQSLITALGLGIKGEEFDSSQLRYHKVIIMTDADVDGAHIRTLLLTFFYRYQRELVAQGF 534
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERG+ YCY++ +L++ + FP NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 535 IYIACPPLYKVERGRNHYYCYNEQQLQQQLAEFPDNANYTIQRFKGLGEMMPNQLWDTTM 594
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R +K++ IEDAAEA+ +F+ LMG RV R++ I++ A +++ LDI
Sbjct: 595 NPETRSIKRVEIEDAAEADHIFTVLMGDRVAPRRQFIEDHAPRLDITDLDI 645
>gi|376006244|ref|ZP_09783547.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
gi|375325373|emb|CCE19300.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
Length = 645
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/651 (60%), Positives = 501/651 (76%), Gaps = 20/651 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 1 MTSTYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNS IPID H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EINPDNSVRVTDDGRGIPIDTHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQ 242
+SVVNALSE +EVTV RD Y Q+Y RG PVT L H SK+ Q GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVLRDHKRYVQRYERGVPVTELEEH----SSKETQTGTSVCFKPDTK 174
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 299
+FTT I+F+++TIA R+RELA+LN + I L R E E+ + Y + GG++EYV
Sbjct: 175 IFTTGIEFEYDTIASRLRELAYLNAGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVT 234
Query: 300 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K+ LH D + + + + +++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K
Sbjct: 235 YMNREKQALHEDTIYVSGERNNVQVEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLK 294
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
LTRT+N++ +K +KD + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 295 TVLTRTMNAIARKRNKIKDNEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVR 354
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E LTE+L+ +P+V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGK
Sbjct: 355 GIVDSLVGEVLTEFLDFNPNVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGK 414
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS PEESEIF+VEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E
Sbjct: 415 LADCSSRDPEESEIFLVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNE 474
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
IQ+LI ALGLG+KGE+F LRYHK+II+TDADVDGAHIRTLLLTFFYRYQ+ L +G
Sbjct: 475 IQSLITALGLGIKGEEFDPSQLRYHKVIIMTDADVDGAHIRTLLLTFFYRYQRELVAQGF 534
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLYKVERG+ YCY++ +L++ + FP NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 535 IYIACPPLYKVERGRNHYYCYNEQQLQQQLAEFPDNANYTIQRFKGLGEMMPNQLWDTTM 594
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R +K++ IEDAAEA+ +F+ LMG RV R++ I++ A +++ LDI
Sbjct: 595 NPETRSIKRVEIEDAAEADHIFTVLMGDRVAPRRQFIEDHAPRLDITDLDI 645
>gi|428203405|ref|YP_007081994.1| DNA gyrase subunit B [Pleurocapsa sp. PCC 7327]
gi|427980837|gb|AFY78437.1| DNA gyrase, B subunit [Pleurocapsa sp. PCC 7327]
Length = 642
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/647 (59%), Positives = 489/647 (75%), Gaps = 19/647 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 4 TSNYGAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVD 63
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ +D S IP D HP T KSALETV+TVLHAGGKFGG S LHGVG+
Sbjct: 64 INSDGSVTVTDNGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGI 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE ++VTVWRD + Q+Y RG PVT L + + ++R GT I F PD Q+F
Sbjct: 122 SVVNALSEWVKVTVWRDNKVHTQRYERGIPVTELE---IKPEKEERTGTSITFLPDLQIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
T I+FD++T+AGR++ELA+LN + I K S+P Y + GG++EYV ++
Sbjct: 179 TGGIEFDYSTLAGRLKELAYLNAGVKITFSDKRGSEP---HVETYCYEGGIKEYVAYMCR 235
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+PLH D++ + +GI +++A+QWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 EKQPLHQDIIYVSGEKNGIQLEVAMQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN++ +K +KD + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTLNNVARKRNKIKDNEPNLAGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L EYLE HP V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SIAGEALNEYLEFHPQVADAIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P ESEIF+VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 416 SSRDPSESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSL 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F LRYH+I+I+TDAD DG HIRTLLLTFFYRYQ+ L D G IY+
Sbjct: 476 ITALGLGIKGEEFDASQLRYHRIVIMTDADSDGGHIRTLLLTFFYRYQRELVDRGFIYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERG+ YCY D E ++ + FP+NA Y+IQRFKGLGEMMP QLWETT+NPE
Sbjct: 536 CPPLYKIERGRNHYYCYSDREKAQIINQFPANANYTIQRFKGLGEMMPDQLWETTMNPET 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LK++ IEDAAEA+ + + LMG RV R+E I+ + + LDI
Sbjct: 596 RTLKRVEIEDAAEADRICTVLMGDRVAPRREFIETHGSRLEFTDLDI 642
>gi|428224467|ref|YP_007108564.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
gi|427984368|gb|AFY65512.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
Length = 646
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/653 (59%), Positives = 494/653 (75%), Gaps = 23/653 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY I+V
Sbjct: 1 MANEYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCHQIQV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D+HP T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 TLNADGSVSVTDDGRGIPTDVHPRTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + ++ RG P+ ++ P + R GT + F PD Q+
Sbjct: 119 VSVVNALSEWVEVTVWRDRKVFKHRFERGVPIGEMSSEPYP---EARTGTSLTFMPDVQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYV 298
FT I+FD+ +A R+RELA+LN + I+ DS E + NE Y + GG++EY+
Sbjct: 176 FTGGIEFDYAILASRLRELAYLNGGVYISF--TDSRLELLKSNEPKVEVYHYEGGIQEYI 233
Query: 299 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
+LN DK+P+H+ V+ + + +G+ ++++LQWC DA++D +LG+AN+IRT+DGGTH+EG+
Sbjct: 234 AYLNRDKQPIHEEVIYVQGEREGVQLEVSLQWCVDAFTDNLLGFANNIRTVDGGTHLEGL 293
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
KA LTRT+NS+ +K +K+ + +L GEH+REGLT +ISV+VP+PEFEGQTKT+LGN EV
Sbjct: 294 KAVLTRTMNSIARKRNRLKENESNLGGEHIREGLTGVISVKVPDPEFEGQTKTKLGNMEV 353
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +V+ V E LTEYL P V D+IL K++ A AA AA+RAR+LVR+KSVL SS+LPG
Sbjct: 354 RGIVESFVGEVLTEYLNFRPGVADAILEKAIQAYNAAEAARRARELVRRKSVLESSTLPG 413
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN
Sbjct: 414 KLADCSSRDASESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNT 473
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EIQ LI ALGLG+KGEDF LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G
Sbjct: 474 EIQALITALGLGIKGEDFDSSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVEQG 533
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
IY+ PPLYKVERG+ YCY D EL+ ++ FP NA Y+IQRFKGLGEMMP QLWET
Sbjct: 534 YIYIACPPLYKVERGRSHYYCYSDRELQGLIQREFPPNASYTIQRFKGLGEMMPTQLWET 593
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
T+NPE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 594 TMNPETRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSRLNLADLDI 646
>gi|428222103|ref|YP_007106273.1| DNA gyrase subunit B [Synechococcus sp. PCC 7502]
gi|427995443|gb|AFY74138.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7502]
Length = 646
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/646 (59%), Positives = 492/646 (76%), Gaps = 17/646 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++TY ++QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+E++DN+VDEA GY IE+
Sbjct: 8 NETYNADQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEVVDNSVDEALGGYCDRIEIE 67
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
LL D S IP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+
Sbjct: 68 LLPDGSVSVTDNGRGIPTDIHPKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGI 125
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE +EV+VWR Y Q++ RG P+ LT + D+ R+GT++RF PD Q+F
Sbjct: 126 SVVNALSEWVEVSVWRQDQIYTQRFERGFPIGILTG--VKTDNP-RRGTQVRFKPDAQIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T FD T+AGR++ELA+LN + I D E+ + Y + GG+ EYV ++ +
Sbjct: 183 LTETTFDFTTLAGRLKELAYLNAGVYIQF--SDRRGEEPRSEVYQYEGGIREYVTYMTRE 240
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ +H D++ + D + +++ALQWCSDAY+D +LG+AN+IRTIDGGTH+EG+K LTR
Sbjct: 241 KEAIHNDIIYVNGERDHVQVEVALQWCSDAYNDNILGFANNIRTIDGGTHLEGLKTVLTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N+ +K K +K+ D +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGNPEVR +VD
Sbjct: 301 TINANARKLKKLKEGDSNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNPEVRGIVDS 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+EYLE HP + SI+ K++ + AA AA+RAR+LVR+KS L SS+LPGKLADCS
Sbjct: 361 FVGEVLSEYLEFHPAIAASIIDKAVQSFNAAEAARRARELVRRKSALESSTLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P ESE+FIVEGDSAGGSAKQGRDR FQAILPLRGK+LN+E+ +++ +YKN EIQ LI
Sbjct: 421 SRDPRESEVFIVEGDSAGGSAKQGRDRHFQAILPLRGKVLNIEKAEDSKIYKNAEIQALI 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
LG+G++GE+F LRYHKII+L DADVDGAHIRTLLLTFFYRYQ+ L D+G IY+G
Sbjct: 481 TGLGMGIRGEEFNLAQLRYHKIILLADADVDGAHIRTLLLTFFYRYQRQLVDQGYIYIGC 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKVERGK +QYCY D EL+ ++FP+NA Y+IQRFKGLGEMMP+QLW+TT+NP R
Sbjct: 541 PPLYKVERGKSMQYCYSDRELQAHLATFPANANYNIQRFKGLGEMMPIQLWDTTMNPATR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 601 TLKQITIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 646
>gi|255073667|ref|XP_002500508.1| predicted protein [Micromonas sp. RCC299]
gi|226515771|gb|ACO61766.1| predicted protein [Micromonas sp. RCC299]
Length = 703
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/656 (59%), Positives = 486/656 (74%), Gaps = 24/656 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG+ IQVL+GLE VRKRP MYIG+T +GLHH+V+E+LDN VDE QAG+AS I V
Sbjct: 52 SDAYGASSIQVLKGLEPVRKRPGMYIGNTSTKGLHHMVWEVLDNGVDEVQAGHASLITVT 111
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ AD S IP D+HPAT S+LETVLTVLHAGGKFGG SGY VSGGLHGVG+
Sbjct: 112 VEADGSVAVEDDGRGIPTDVHPATGTSSLETVLTVLHAGGKFGGDESGYHVSGGLHGVGI 171
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
SVVNALS+S EVTVWR EY Q +SRG P+T + V V K +GTR+RF PD
Sbjct: 172 SVVNALSDSTEVTVWRGDREYRQSFSRGAALAPMTEGSQDVANVGKK--KGTRVRFKPDP 229
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ--YNEYF-FAGGLEEYV 298
+F FD N I R++ELAFLN T ++ D +K + Y E F GGL++YV
Sbjct: 230 SIFKERQDFDPNIILARMKELAFLNSTATDEASMDEGDVKKTEEYYEEVLSFPGGLKDYV 289
Query: 299 QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
LN +PLH+ + FR +VDG+ ++ ALQW +AY+DT+LGYANSIRT DGGTH++G+K
Sbjct: 290 VDLNEGAEPLHEPITFRAEVDGVQVEGALQWTKEAYTDTLLGYANSIRTSDGGTHLDGLK 349
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
SLTR +N+ +K+K +K+ D +L GEH+REGL+ +I+V VP PEFEGQTKTRLGNPEVR
Sbjct: 350 QSLTRAVNTQARKAKLLKEADANLGGEHIREGLSAVIAVWVPQPEFEGQTKTRLGNPEVR 409
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
KVV+ + E ++E+LE +P+ L SI SK+ A KAA AAKRAR+LVR+KSVLRS SLPGK
Sbjct: 410 KVVESVIGEQVSEHLEFYPNTLGSIFSKASQAQKAAEAAKRARELVRRKSVLRSGSLPGK 469
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
L+DCS + PE +EIF+VEGDSAGGSAKQGRDRRFQA+LPLRGKILNVERKDEA+MYKN E
Sbjct: 470 LSDCSVSDPESTEIFLVEGDSAGGSAKQGRDRRFQAVLPLRGKILNVERKDEASMYKNTE 529
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I +++ ALGLG+KGE F + LRY KI+ILTDADVDGAHIRTLLLTF +RYQ+ LF++G
Sbjct: 530 ISSMVTALGLGLKGEPFDESQLRYSKIVILTDADVDGAHIRTLLLTFLFRYQRGLFEQGK 589
Query: 599 IYVGVPPLYKVERGKQVQ-----YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 653
+YV VPPLYKVE G+ + YCYD+A+L+ ++ P A SIQRFKGLGEMMP QL
Sbjct: 590 VYVAVPPLYKVESGRAGKNNPPTYCYDEAQLQAHLATLPEGASRSIQRFKGLGEMMPEQL 649
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
W TTLNPE R+LK+L ++DAA AN F LM +V R+E I+ L+ +D+
Sbjct: 650 WSTTLNPETRLLKRLTVDDAAMANKTFQLLMSDKVAPRREFIETEGP--KLEDIDV 703
>gi|220908378|ref|YP_002483689.1| DNA gyrase subunit B [Cyanothece sp. PCC 7425]
gi|219864989|gb|ACL45328.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7425]
Length = 645
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/650 (60%), Positives = 484/650 (74%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY NI V
Sbjct: 1 MTTNYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKNILV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+ T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 ELNPDGSVTVTDDGRGIPTDIVSKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS LE VWRDG + Q++ RG P T L +R GT I+F PD ++
Sbjct: 119 VSVVNALSSWLEAKVWRDGKVFTQRFERGLPATDLKAQP---SGGNRTGTAIQFMPDAEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQW 300
FT I+FD+ T++GR+RELA+LN + I R D K YF+ GG++EYV +
Sbjct: 176 FTETIEFDYKTLSGRLRELAYLNAGVKIEFRDGRLDLLKRDEPLLETYFYEGGIKEYVSY 235
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+PLH +++ + + + + +++ALQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNVDKEPLHQEIIYVQGERNDVQVEVALQWCTDAYTDNLLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN+ +K +K+ D +L+GE+VREG+T +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNNFARKRNKLKEGDPNLAGENVREGMTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYL+ P V+DSIL K++ A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFRPAVVDSILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P E+EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPREAEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG+KGE+F LRYHKII +TDADVDGAHIRTLLLTFFYRYQ+ L D+G I
Sbjct: 476 QSLITALGLGIKGEEFDASNLRYHKIIAMTDADVDGAHIRTLLLTFFYRYQRQLVDQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
YV PPLYK+ERG+ YCY+D E ++ + NA Y IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YVACPPLYKIERGRNHYYCYNDRERDQIIAGLGENARYEIQRFKGLGEMMPQQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LKQ+ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 596 PETRTLKQVTIEDAAEADRIFNILMGDRVAPRREFIETYGPRLNLADLDI 645
>gi|443326004|ref|ZP_21054673.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
gi|442794385|gb|ELS03803.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
Length = 644
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/647 (58%), Positives = 502/647 (77%), Gaps = 13/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSSYDADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ ++ +I P+ +H T KSALETV+TVLHAGGKFGGS SGY VSGGLHGVG
Sbjct: 61 DITSEGAIKVTDDGRGIPVGIHSKTGKSALETVMTVLHAGGKFGGSGSGYKVSGGLHGVG 120
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRDG + Q+Y +GK L D+ + GT + F+PD +
Sbjct: 121 VSVVNALSEWVEVTVWRDGDIHLQRYEKGKAQGVLQSSP-NADNPTQTGTSVHFFPDATI 179
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT I+F++N +AGR++ELA+LN + I ++ + E Q Y + GG++EYV ++
Sbjct: 180 FTDTIEFEYNVLAGRLKELAYLNAGVKITF-TDNREAEPRQ-ELYCYEGGIKEYVAYMTR 237
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LH D++ ++ +G+T+++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 238 EKQALHEDILYVAEEKNGVTVEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 297
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N+ +K +KD D +L GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 298 RTMNNFARKRNKLKDSDKNLGGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L +YLE + V D+I+ K++ A KAA AA+ AR+LVR+KSVL S++LPGKLADC
Sbjct: 358 SLVGEVLKDYLEFNLGVGDAIIEKAVQAFKAAEAARHARELVRRKSVLESTTLPGKLADC 417
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P ESEI++VEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ++
Sbjct: 418 SSRDPAESEIYLVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSM 477
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F E LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ + D+G +Y+
Sbjct: 478 ITALGLGIKGEEFNPEQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQREMVDQGYVYIA 537
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERG+ YCY D +L++ + P+NA Y+IQRFKGLGEMMP QLW+TT+NPE
Sbjct: 538 CPPLYKLERGRNHYYCYSDRDLQQKIAELPANANYTIQRFKGLGEMMPQQLWDTTMNPET 597
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
RM+K++ IEDAAEA+ +F+ LMG RV R+E I+ A +NL LDI
Sbjct: 598 RMMKRVEIEDAAEADRIFTVLMGDRVAPRREFIETNAPKLNLMDLDI 644
>gi|428205380|ref|YP_007089733.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
gi|428007301|gb|AFY85864.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
Length = 645
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/650 (59%), Positives = 489/650 (75%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTSSYSAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVQVVDDGRGIPTDTHPQTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD + Q+Y RG P+ L + + GT +RF PD ++
Sbjct: 119 ISVVNALSEWVEVTVWRDKKVHTQRYERGVPMGELQTKSF---KEAKTGTGVRFKPDAEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT +FD+ T+AGR+RELA+LN + I R E ++ + Y + GG+ EYV +
Sbjct: 176 FTVGTEFDYITLAGRLRELAYLNAGVRITFTDHRLELLKSQEPKVETYEYKGGIREYVSY 235
Query: 301 LNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N DK+ LH+ + F + + + + +++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+K
Sbjct: 236 INNDKQALHEEIIFVQGERNNVQVEVALQWCTDAYTDNLLGFANNIRTVDGGTHLEGLKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +KD + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKDNEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE P + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPSIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRNQAILPLRGKILNIEKTDDAKIYKNTEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI ALGLGVKGE+F LRYHKI+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G I
Sbjct: 476 QALITALGLGVKGEEFDSSQLRYHKIVIMTDADVDGAHIRTLLLTFFYRYQRQLIEQGFI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPL+K+ERG+ YCY + E + + FP+NA Y+IQRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLFKIERGRNHYYCYSERERDQKIAEFPANANYTIQRFKGLGEMMPQQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
E R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +NL LDI
Sbjct: 596 NETRTLKRVEIEDAAEADRIFTVLMGDRVAPRREFIETYGSRLNLVELDI 645
>gi|307154719|ref|YP_003890103.1| DNA gyrase subunit B [Cyanothece sp. PCC 7822]
gi|306984947|gb|ADN16828.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7822]
Length = 640
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/647 (60%), Positives = 490/647 (75%), Gaps = 17/647 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINPDGSVTVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE + VTVWRD + Q+Y RG PVT+L ++ GT + F PD Q+
Sbjct: 119 VSVVNALSEWVNVTVWRDQKRFTQRYERGIPVTSLESQP---ETDHSTGTSVSFLPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ I+FD++T+AGR+RELA+LN + I D E+ + Y + GG++EYV ++
Sbjct: 176 FSDGIEFDYSTLAGRLRELAYLNAGVRITF--SDKRLEQPRVESYCYEGGIKEYVAYMCR 233
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+PLH+ ++ + + +GI I++ALQW D Y+D +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKQPLHEEIIYVQGERNGIQIEVALQWYIDTYNDNLLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EYLE HP + DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLGEYLEFHPQIADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P +SEIFIVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ+L
Sbjct: 414 SERDPAKSEIFIVEGDSAGGSAKQGRDRRSQAILPLRGKILNIEKTDDAKIYKNNEIQSL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG+KGE+F LRYH+III+TDAD DG+HIRTLLLTFFYRYQ+++ D+G IY+
Sbjct: 474 ITALGLGIKGEEFDAAQLRYHRIIIMTDADYDGSHIRTLLLTFFYRYQRSIVDQGYIYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVERGK +YCY++ EL++ S P NA YSIQRFKGLGEMMP QLWETT+NPE
Sbjct: 534 CPPLYKVERGKNHRYCYNERELQQYISELPPNANYSIQRFKGLGEMMPQQLWETTMNPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R+LKQ+ IEDAA+A +F+ LMG RV R+E I+ + L LDI
Sbjct: 594 RLLKQVEIEDAAKAEELFTILMGDRVLPRREFIETHGPRLKLTDLDI 640
>gi|427418615|ref|ZP_18908798.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
gi|425761328|gb|EKV02181.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
Length = 645
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/650 (58%), Positives = 494/650 (76%), Gaps = 18/650 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY I +
Sbjct: 1 MTTDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKTITI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP D+H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDVHARTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+ E+ Q+Y RG+ L+ + + + GT + F PD+ +
Sbjct: 119 VSVVNALSEWVEVTVWRNKKEHLQRYERGEAQGELS---VKSGADSQTGTSVSFKPDQLI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FT ++FD++T+AGR+RELA+LN + I R E ++ + N YF+ GG+ EYV++
Sbjct: 176 FTETVEFDYSTLAGRLRELAYLNAGVDITFTDHRLELLKADEPKINRYFYEGGIREYVEY 235
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+P+H D++ + +G+ ++ ALQW DAYSD ++G+AN+IRT+DGGTH+EG+KA
Sbjct: 236 INKEKQPIHPDIIYVTGEKNGVQVEAALQWSVDAYSDNLMGFANNIRTVDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+N+ +K KD + +L+GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNNFARKRNKRKDNEPNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD + E L+EYL+ +P+V+DSIL K++ + AA AA+RARDLVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLIGETLSEYLDFNPNVVDSILEKAIQSFNAAEAARRARDLVRRKSVLESSTLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN E+
Sbjct: 416 ADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNNEV 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG+KGE+F LRYH+I ++TDADVDGAHIRTLLLTFFYRYQ+ L D+G +
Sbjct: 476 QSLITALGLGIKGEEFDSSQLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRALIDQGFV 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ERG+ YCY + EL++ S+ P+NA Y++QRFKGLGEMMP QLW+TT+N
Sbjct: 536 YIACPPLYKLERGRSHTYCYSEQELQRGISALPANAKYNVQRFKGLGEMMPTQLWDTTMN 595
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R LK++ IEDAAEA +F+ LMG RV R+E I+ +N+ LDI
Sbjct: 596 PESRTLKKVEIEDAAEAERIFTVLMGDRVAPRREFIETYGPKLNMADLDI 645
>gi|428315585|ref|YP_007113467.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
gi|428239265|gb|AFZ05051.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
Length = 646
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/654 (59%), Positives = 494/654 (75%), Gaps = 25/654 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP + T KS +ETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTGIVAKTGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVW D E+ Q+Y RG PVT L V P + R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWLDQKEHLQRYERGNPVTEL--KVKP-NKGTRTGTSVSFLPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRK------EDSDPEKNQYNEYFFAGGLEEY 297
FTT I+FD+ T+AGR+REL +LN + I + S+P Y + GG++EY
Sbjct: 176 FTTGIEFDYTTLAGRLRELGYLNAGVRITFSDHRLALLKSSEP---HIETYCYEGGIKEY 232
Query: 298 VQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+ ++N +K+PLHD V+ + + + + I++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG
Sbjct: 233 IAYMNREKQPLHDEVIYVQGERNNVQIEVALQWCVDAFSDNVLGFANNIRTIDGGTHLEG 292
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+KA LTRT+NS+ +K +K+ + +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGN E
Sbjct: 293 LKAVLTRTMNSIARKRNKIKENEPNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNTE 352
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR +VD V E LTEYLE P V D+IL K++ A KAA AA+RARDLVR+KSVL SS LP
Sbjct: 353 VRGIVDSLVGEVLTEYLEFRPQVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLP 412
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SEI++VEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN
Sbjct: 413 GKLADCSSRDPALSEIYLVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKN 472
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EIQ+LI ALGLG+KGE+F LRYH I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++
Sbjct: 473 NEIQSLITALGLGIKGEEFDPAQLRYHHIVIMTDADVDGAHIRTLLLTFFYRYQRALVEQ 532
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G IY+ PPLYKVERG+ YCY D E+ V++ FP+NA Y++QRFKGLGEMMP QLW+
Sbjct: 533 GYIYIACPPLYKVERGRNHYYCYSDREMNNLVRNEFPANANYTVQRFKGLGEMMPTQLWD 592
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 593 TTMNPETRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLNLLDLDI 646
>gi|300865369|ref|ZP_07110180.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
gi|300336672|emb|CBN55330.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
Length = 646
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/654 (59%), Positives = 501/654 (76%), Gaps = 25/654 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP + T KS +ETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTGIVAKTGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD ++Q++ RG PVT L V ++R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRDKKVHNQRFERGIPVTDL---VDKPSKENRSGTSVSFLPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRK----EDSDPEKNQYNEYFFAGGLEEY 297
F+T I+FD+ ++GR+RELA+LN K+T + R+ + S+P Y + GG++EY
Sbjct: 176 FSTGIEFDYTILSGRLRELAYLNAGVKITFSDRRLELLKSSEP---HIETYCYEGGIKEY 232
Query: 298 VQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+ ++N DK+PLH+ V F + + + + ++++LQWC DAYSD +LG+AN+IRTIDGGTH+EG
Sbjct: 233 IAYMNRDKQPLHEEVIFIQGERNNVQVEVSLQWCIDAYSDNVLGFANNIRTIDGGTHLEG 292
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+KA LTRT+N++ +K +K+ + +L GE++REGLT +ISV+VP+PEFEGQTKT+LGN E
Sbjct: 293 LKAVLTRTMNAIARKRNKIKENEPNLGGENIREGLTAVISVKVPDPEFEGQTKTKLGNTE 352
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR +VD V E LTEYLE P V D+IL K++ A KAA AA+RARDLVR+KSVL SS LP
Sbjct: 353 VRGIVDSLVGEVLTEYLEFRPQVADTILEKAIQAFKAAEAARRARDLVRRKSVLESSPLP 412
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P +SEI++VEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN
Sbjct: 413 GKLADCSSRDPSKSEIYLVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKN 472
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EIQ+LI ALGLG++G++F LRYH I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+
Sbjct: 473 NEIQSLITALGLGIRGDEFDPSQLRYHHIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQ 532
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G IY+ PPLYKVERG+ YCY D EL+ +++ FP+NA Y+IQRFKGLGEMMP QLWE
Sbjct: 533 GYIYIACPPLYKVERGRNHFYCYSDRELQNLIRNEFPANANYTIQRFKGLGEMMPQQLWE 592
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 593 TTMNPESRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLNLTDLDI 646
>gi|334120265|ref|ZP_08494347.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
gi|333457053|gb|EGK85680.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
Length = 646
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/651 (59%), Positives = 492/651 (75%), Gaps = 19/651 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP + T KS +ETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTGIVAKTGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD E+ Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRDQKEHLQRYERGFPVTELNAKP---NKGTRTGTSVSFLPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
F+T I+FD+ +AGR+REL +LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FSTGIEFDYTILAGRLRELGYLNAGVRITFSDHRLELLKSSEPRIETYCYEGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH+ V+ + + + + I++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEVIYVQGERNNVQIEVALQWCVDAFSDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT+NS+ +K +K+ + +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNSIARKRNKIKENEPNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE P V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPQVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P SEI++VEGDSAGGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPALSEIYLVEGDSAGGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q+LI ALGLG+KGE+F LRYH I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G I
Sbjct: 476 QSLITALGLGIKGEEFDPGQLRYHHIVIMTDADVDGAHIRTLLLTFFYRYQRALVDQGYI 535
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
Y+ PPLYKVERG+ YCY D E+ +++ FP+NA Y+IQRFKGLGEMMP QLW+TT+
Sbjct: 536 YIACPPLYKVERGRNHYYCYSDREMNNLIRNEFPANANYTIQRFKGLGEMMPTQLWDTTM 595
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R LK++ IEDAAEA+ +F+ LMG RV R+E I+ +NL LDI
Sbjct: 596 NPETRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGPKLNLLDLDI 646
>gi|37522075|ref|NP_925452.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
gi|35213074|dbj|BAC90447.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
Length = 644
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/651 (57%), Positives = 474/651 (72%), Gaps = 21/651 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++TYG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYEI+DN+VDEA AG+ +I +
Sbjct: 1 MTETYGAEQIQVLEGLEHVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGHCKHIAI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L AD S IP D HP T KS +ETVLTVL AGGKFGG S LHGVG
Sbjct: 61 SLGADGSATITDDGRGIPTDTHPRTGKSTIETVLTVLGAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+VVNALS L T+WR+G +Y Q++ RG P L + DS+ R+GT I F PD ++
Sbjct: 119 AAVVNALSTILTATIWREGKQYIQRFHRGIPEGGL---AVSSDSQKRRGTMISFLPDPEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FTT + FD +T+ R RELAFLN + R D E + Y + GG+ EYV+++
Sbjct: 176 FTTGVDFDFDTLLSRFRELAFLNAG--VEFRFSDLRGETERTESYIYEGGIREYVKYMTR 233
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K LH D++ ++ DG++++ ALQW +D Y+D +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKAALHPDIIFINQERDGVSVECALQWSTDVYNDNVLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT NS +K+ +KD D +L+GEHVREGLT ++SV+VPNPEFEGQTKT+LGNPEVR +VD
Sbjct: 294 RTFNSFARKANKLKDGDKNLTGEHVREGLTAVLSVKVPNPEFEGQTKTKLGNPEVRGIVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E LTEYLE HPDV+ SIL K+L +++A AA++ARDLVR+KS L SS+LPGKLADC
Sbjct: 354 GVISEKLTEYLEFHPDVVASILEKALQSMQAEEAARKARDLVRRKSALESSTLPGKLADC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P ESE+F+VEGDSAGGSAKQGRDRRFQAILPLRGKILN+ER D+ +Y N EIQ +
Sbjct: 414 QSRDPAESEVFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERADDRKIYGNNEIQAM 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I LGLG+K E+F LRYH+III+TDADVDGAHIRTLLLTFFYRY++ L ++G IY+
Sbjct: 474 ITGLGLGLKTEEFDVGRLRYHRIIIMTDADVDGAHIRTLLLTFFYRYKRDLVEQGYIYIA 533
Query: 603 VPPLYKVE----RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
PPLYK+ R V+YCY + E + + N Y +QRFKGLGEM QLWETT+
Sbjct: 534 QPPLYKISIGGGRNIDVRYCYSEQEKEAILRGLRENQKYELQRFKGLGEMQADQLWETTM 593
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R L+Q+ IEDAAEA+ VF+ LMG RV+ R+E I+ + + LDI
Sbjct: 594 NPETRTLRQVTIEDAAEADRVFNILMGDRVEPRREFIETYGPRLQMADLDI 644
>gi|284928768|ref|YP_003421290.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
gi|284809227|gb|ADB94932.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
Length = 642
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/649 (58%), Positives = 491/649 (75%), Gaps = 21/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+EQIQVLEGLE VRKRP MYIG+TGP+GLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 3 IKSDYGAEQIQVLEGLEPVRKRPGMYIGTTGPKGLHHLVYEVVDNSIDEALAGHCTHIEV 62
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP D+HPAT KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 63 DINIDGSVTVTDNGRGIPTDIHPATGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 120
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE L + VWRD Y Q+Y G V+ L D++ +GT + F PDKQ+
Sbjct: 121 ISVVNALSEWLIIKVWRDNSVYTQRYECGVAVSELKKEP---DTEHPKGTSVSFLPDKQI 177
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ-YNE-YFFAGGLEEYVQWL 301
FT+ FD+ T++ R+RELA+LN ++TI +D K + Y+E YF+ GGL EYV ++
Sbjct: 178 FTSDTNFDYATLSARLRELAYLNSQITIKF----TDYRKQEPYSETYFYEGGLREYVTYM 233
Query: 302 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
+K+ LH D++ + G+ ++ AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 234 CRNKEALHKDIIYICGEKKGVQVEAALLWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTV 293
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTRT+N++ +K +K+ + +LSGE+VREGLT I+SV+VP PEFEGQTKT+LGN EVR +
Sbjct: 294 LTRTMNNVARKRNKIKENEPNLSGENVREGLTGIVSVKVPEPEFEGQTKTKLGNTEVRGI 353
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V E L EYLE +P V D I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLA
Sbjct: 354 VDLLVGEVLGEYLEFNPHVGDIIIEKAVQAFKAAEAARRARDLVRRKSVLESSPLPGKLA 413
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P E+EIF+VEGDSAGGSAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ
Sbjct: 414 DCSTRDPAEAEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQ 473
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+LI ALGLG+KGE+F LRYH+I+I+TDADVDGAHIRTL+LTFFYRYQ+ L ++G IY
Sbjct: 474 SLITALGLGIKGEEFDVSQLRYHRIVIMTDADVDGAHIRTLILTFFYRYQRLLIEQGFIY 533
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYK+ERG+ YCY++ +L+ + P+NA Y+IQRFKGLGEMMPVQLW TT+NP
Sbjct: 534 IACPPLYKIERGRNHSYCYNEQQLQDNIKALPANAKYTIQRFKGLGEMMPVQLWNTTMNP 593
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
E R +K++ I+DA EA+ +F+ LMG +V R++ I+N + +NL+ LDI
Sbjct: 594 ETRSMKRVEIDDAVEADRIFTILMGDKVAPRRQFIENYGSKLNLNDLDI 642
>gi|384252438|gb|EIE25914.1| type II DNA topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 744
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/677 (57%), Positives = 497/677 (73%), Gaps = 26/677 (3%)
Query: 56 RAFLSSSIATEAFKENPVSK--TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYE 113
R L+++ A + N +S Y ++QIQVLEGL+ VRKRP MYIGSTG RGLHHLVYE
Sbjct: 71 RRSLTTTFAAQTSPSNVLSAHGDYDADQIQVLEGLDPVRKRPGMYIGSTGQRGLHHLVYE 130
Query: 114 ILDNAVDEAQAGYASNIEVAL--------LADNS--IPIDLHPATNKSALETVLTVLHAG 163
ILDNA+DE Q+GYA ++V + ++D+ IP + HP T +SALETVLTVLHAG
Sbjct: 131 ILDNAIDEVQSGYAHTVKVEMDLTSGWVTISDDGRGIPTNTHPQTGRSALETVLTVLHAG 190
Query: 164 GKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVL 223
GKFGG SGYSVSGGLHGVG+SVVNALSE L VTVWR G E+ Q Y +G+P+T L L
Sbjct: 191 GKFGGQGSGYSVSGGLHGVGISVVNALSEQLHVTVWRQGKEFQQSYRQGRPMTELLEAQL 250
Query: 224 PVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD---- 279
P + GT+++F DK VF + D TI R++ELAFLN TI R +S
Sbjct: 251 PKKDSKKSGTQVKFLYDKDVFAKGVTMDPKTIRTRLQELAFLNSNATIWFRTIESGSAPS 310
Query: 280 -------PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 332
P + ++ + F GGL EYV++LN D +P+H+ + + VDG+ +++ALQWCSD
Sbjct: 311 NGNGASPPPEPEWEKLHFDGGLCEYVKYLNRDSQPMHEPIFVTEKVDGVVVEVALQWCSD 370
Query: 333 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 392
+SD ++G+ NS++TIDGGTHI+G+KA+LTRTLN+LG+K+K +K+ + +L+G+H+REGL+
Sbjct: 371 TFSDLLIGFVNSVKTIDGGTHIDGLKAALTRTLNTLGRKTKALKENEANLAGDHIREGLS 430
Query: 393 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 452
C+ISV+VP PEFEGQTKTRLGNPEVRK+VD V + + E LE+ L +L K+++A +
Sbjct: 431 CVISVKVPEPEFEGQTKTRLGNPEVRKIVDACVAKGIMESLEMDTATLGLVLGKAVAAWR 490
Query: 453 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 512
AA AAK+AR+LVR+KS+L S+LPGKL+DC+ST SEIF+VEGDSAGGSAKQ RDRRF
Sbjct: 491 AAEAAKKARELVRRKSLLTKSTLPGKLSDCTSTDKALSEIFVVEGDSAGGSAKQARDRRF 550
Query: 513 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 572
QA+LPLRGKILNVERKD+AA+YKN EI NLI ALGLG+KGE+ LRY K+I+LTDAD
Sbjct: 551 QAVLPLRGKILNVERKDDAALYKNNEISNLIVALGLGLKGEEMPN--LRYGKVILLTDAD 608
Query: 573 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 632
VDGAHIRTLLLTF +RY + LFD G IYVGVPPLYK+E G+ Y Y + EL
Sbjct: 609 VDGAHIRTLLLTFLFRYARDLFDRGHIYVGVPPLYKLEVGRSSVYLYSEGELSARTQGLA 668
Query: 633 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 692
S + Y++QRFKGLGEMMP QLW TTLNP RMLK+L + DAAEA+ +F+ LMG +V+ R+
Sbjct: 669 SGS-YTVQRFKGLGEMMPDQLWHTTLNPATRMLKRLTVNDAAEASHLFALLMGDKVEPRR 727
Query: 693 ELIQNAANLVNLDHLDI 709
LIQ + L+ LDI
Sbjct: 728 ALIQAHGASLALEDLDI 744
>gi|86606189|ref|YP_474952.1| DNA gyrase subunit B [Synechococcus sp. JA-3-3Ab]
gi|86554731|gb|ABC99689.1| DNA gyrase, B subunit [Synechococcus sp. JA-3-3Ab]
Length = 642
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/648 (58%), Positives = 489/648 (75%), Gaps = 17/648 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ YG+EQIQVLEGLEAVR+RP MYIGSTGP+GLHHLVYE++DN+VDEA AGY + IEV
Sbjct: 1 MTENYGAEQIQVLEGLEAVRRRPGMYIGSTGPKGLHHLVYEVVDNSVDEALAGYCNEIEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP+D+HP T +SAL TV+TVLHAGGKFGG S LHGVG
Sbjct: 61 TLHPDGSVSVLDNGRGIPVDIHPKTGQSALVTVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LE VWR+G Y Q++ RG V +L P ++ R+GT +RF PD+ +
Sbjct: 119 VSVVNALSEWLEARVWREGKVYFQRFERGAVVGSLQSEPQPAGAQ-RRGTEVRFKPDELI 177
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F +FD++ +A R+RELA+LN L I DP + Y FAGG++EYV ++N
Sbjct: 178 FPER-EFDYSLLAARLRELAYLNAGLKIIFSDLRRDPPHREV--YQFAGGIKEYVAFINH 234
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K P+H D++ R + DG+ ++ ALQWC+D Y+DT++G+AN+IRT +GGTH+EG+K +LT
Sbjct: 235 EKTPIHPDIIYVRGERDGVEVEAALQWCADVYTDTLIGFANNIRTTEGGTHLEGLKTALT 294
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
T+NS +K +KD D +L+GE+VREGLT I++V+VPNPEFEGQTKT+LGN EVR +V
Sbjct: 295 LTINSQARKLNKLKDSDSNLAGENVREGLTAILAVKVPNPEFEGQTKTKLGNTEVRGIVQ 354
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEYLE +P+V I+ K++ + AA AA+RAR+LVR+KS L SS+LPGKLADC
Sbjct: 355 TLVSEALTEYLEFNPNVARGIVEKAIQSFNAAEAARRARELVRRKSALESSTLPGKLADC 414
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P ESE+++VEGDSAGGSAKQGRDR+FQA+LPLRGKILN+E+ D A +YKN EIQ +
Sbjct: 415 SCRDPAESEVYLVEGDSAGGSAKQGRDRQFQAVLPLRGKILNIEKADPAKIYKNAEIQAM 474
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLGVKGE+F LRYH+II++TDADVDG+HIRTLLLTFFYRYQK L ++G +Y+
Sbjct: 475 ITALGLGVKGEEFDPSQLRYHRIILMTDADVDGSHIRTLLLTFFYRYQKALLEQGYVYIA 534
Query: 603 VPPLYKVERGK-QVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK+E G+ V+YCY++AE ++V S P+N Y+IQRFKGLGEMMP QLWETT+NP
Sbjct: 535 CPPLYKIEWGRNNVRYCYNEAEKEQVLRSLPANTKYTIQRFKGLGEMMPEQLWETTMNPA 594
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R+LKQ+ IEDAAEA+ +F+ LMG V R+E I+ + ++L LDI
Sbjct: 595 TRVLKQITIEDAAEADRIFTILMGDAVGPRREFIEAHSAQLDLAALDI 642
>gi|86607821|ref|YP_476583.1| DNA gyrase subunit B [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556363|gb|ABD01320.1| DNA gyrase, B subunit [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 642
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/648 (58%), Positives = 487/648 (75%), Gaps = 17/648 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ YG+EQIQVLEGLEAVRKRP MYIGSTGP+GLHHLVYE++DN+VDEA AGY ++I++
Sbjct: 1 MTENYGAEQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVYEVVDNSVDEALAGYCNDIQI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L D S IP+D+HP T +SAL TVLTVLHAGGKFGG S LHGVG
Sbjct: 61 SLHPDGSVSVLDNGRGIPVDIHPKTGQSALVTVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWR+G Y Q++ RG V +L P S +R+GT +RF PD +
Sbjct: 119 VSVVNALSEWVEVTVWREGKVYFQRFERGAVVGSLKSEPQPKGS-NRRGTEVRFKPDGLI 177
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F +FD+ +A R RELA+LN L I DP + Y +AGG++EYV ++N
Sbjct: 178 FPER-EFDYAVLAARFRELAYLNAGLKITFSDLRRDPPHCE--TYQYAGGIKEYVAFINH 234
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K P+H D++ + + DG+ +++ALQWCSD Y+DT++G+AN+IRT +GGTH+EG+K SLT
Sbjct: 235 EKTPIHSDIIYIQGERDGVEVEVALQWCSDVYTDTLIGFANNIRTNEGGTHLEGLKTSLT 294
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
T+NS +K +KD D +L+GE+VREGLT I+SV+VPNPEFEGQTKT+LGN EVR +V
Sbjct: 295 LTINSQARKLNKLKDSDSNLAGENVREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRGIVQ 354
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEYLE +P+V I+ K++ + AA AA+RAR+LVR+KS L SS+LPGKLADC
Sbjct: 355 TLVSEALTEYLEFNPNVARGIVDKAIQSFNAAEAARRARELVRRKSALESSTLPGKLADC 414
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P ESE+++VEGDSAGGSAKQGRDR+FQA+LPLRGKILN+E+ D A +YKN EIQ +
Sbjct: 415 SCRDPAESEVYLVEGDSAGGSAKQGRDRQFQAVLPLRGKILNIEKADPAKIYKNAEIQAM 474
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLGVKG++F LRYH+II++TDADVDG+HIRTLLLTFFYRYQK L ++G +Y+
Sbjct: 475 ITALGLGVKGDEFDPSQLRYHRIILMTDADVDGSHIRTLLLTFFYRYQKALLEQGYVYIA 534
Query: 603 VPPLYKVERGK-QVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK+E G+ V+YCY DAE ++ P+NA Y+IQRFKGLGEMMP QLWETT+NP
Sbjct: 535 CPPLYKIEWGRNNVRYCYSDAEKDQILRGLPANAKYTIQRFKGLGEMMPEQLWETTMNPA 594
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R LKQ+ IEDA EA+ +F+ LMG V R+E I+ + ++L LDI
Sbjct: 595 TRTLKQITIEDAVEADRIFTILMGDAVGPRREFIEAHSAHLDLAALDI 642
>gi|303273552|ref|XP_003056137.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462221|gb|EEH59513.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/619 (59%), Positives = 458/619 (73%), Gaps = 20/619 (3%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADN---------SIPIDLHPA 147
MYIG+T +GLHHLV+E+LDN+VDE QAG+AS I V L D IP D+HPA
Sbjct: 1 MYIGNTSTKGLHHLVWEVLDNSVDEIQAGHASVITVVLEPDGFVSVEDDGRGIPTDVHPA 60
Query: 148 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 207
T S+LETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE EVTVW+ G + Q
Sbjct: 61 TGVSSLETVLTVLHAGGKFGGDESGYHVSGGLHGVGISVVNALSELCEVTVWKGGKVFTQ 120
Query: 208 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 267
+SRG V +T P + + GTR+RF PD Q+F FD N I R++ELAFLN
Sbjct: 121 AFSRGYAVADMTESFEP-GADGKNGTRVRFKPDHQIFKEKASFDPNIIISRMKELAFLNS 179
Query: 268 KLTIALR---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 324
T+ R + + N F GGL++YV LN + LHD + FR +V+G+ ++
Sbjct: 180 TATLKFRIPVDVHKKMTRKKANILSFPGGLKDYVVDLNMGSETLHDPITFRSEVEGVQVE 239
Query: 325 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 384
ALQW +A++DT LGYANSIRT DGG+H++G+K +LTRT+N+ +K+K +KD D +L G
Sbjct: 240 GALQWTREAFTDTTLGYANSIRTSDGGSHLDGLKFALTRTVNAQARKAKLLKDGDSNLGG 299
Query: 385 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 444
EHVREGL+ +++V VP PEFEGQTKTRLGNPEVRKVV+ + E + E+LE +P VL SI
Sbjct: 300 EHVREGLSAVLAVWVPQPEFEGQTKTRLGNPEVRKVVEAVIGEQIAEHLEFYPSVLQSIF 359
Query: 445 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 504
+K+ A KAA AAKRAR+LVR+KSVLRS SLPGKL+DCS++ P+ SEIF+VEGDSAGGSA
Sbjct: 360 NKAQQAAKAAEAAKRARELVRRKSVLRSGSLPGKLSDCSNSDPDISEIFLVEGDSAGGSA 419
Query: 505 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 564
KQGRDRRFQA+LPLRGKILNVERKDE++MYKN EI +++ ALGLG+KG+DF + ALRY K
Sbjct: 420 KQGRDRRFQAVLPLRGKILNVERKDESSMYKNTEISSMVTALGLGLKGDDFDESALRYSK 479
Query: 565 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER------GKQ-VQY 617
I+ILTDADVDGAHIRTLLLTF YRYQ+ LF+ G ++V VPPLYKVE GK+ + Y
Sbjct: 480 IVILTDADVDGAHIRTLLLTFLYRYQRALFERGKVFVAVPPLYKVEHTDGKGGGKRSITY 539
Query: 618 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 677
CYD+ +L K+ SS P + SIQRFKGLGEMMP QLW TTLNPE R+LK+L ++DAAE N
Sbjct: 540 CYDEVQLAKLLSSLPDDTKRSIQRFKGLGEMMPEQLWNTTLNPESRLLKRLTVDDAAEVN 599
Query: 678 VVFSSLMGARVDTRKELIQ 696
F LM +V R+ I+
Sbjct: 600 QTFQLLMSDKVAPRRAFIE 618
>gi|145344184|ref|XP_001416617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576843|gb|ABO94910.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 662
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/643 (57%), Positives = 477/643 (74%), Gaps = 13/643 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVL+GLE VRKRP MYIGST +GLHHLV+E+LDN+VDE QAG+AS++ V
Sbjct: 21 SGDYDAGSIQVLQGLEPVRKRPGMYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVRVV 80
Query: 134 L-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ + D+ IP D+HP T KS+LETVLT+LHAGGKFGG SSGY VSGGLHGVG+
Sbjct: 81 VEENGFVSVVDDGRGIPTDVHPVTGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGI 140
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE +EVTVWR+G EY Q +SRG + + S ++GT IRF PD Q+F
Sbjct: 141 SVVNALSELVEVTVWRNGNEYIQSFSRGIALGPMQEKKQD-GSGQKKGTMIRFKPDDQIF 199
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++FD I R++ELAFLN + LR D ++ + + FA GL++YV L +D
Sbjct: 200 D-KVKFDPTIIRTRMKELAFLNSGTELHLRTFDKKTKEYEDEKLLFAEGLKDYVLDLTSD 258
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
LH+ + F +DG+ ++ AL W +D+YSDT+LGYANSIRT DGGTH++G+K SLT+T
Sbjct: 259 ATRLHEPITFSGTMDGVRVEGALCWTADSYSDTLLGYANSIRTTDGGTHLDGLKYSLTKT 318
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
LN + +K+K +KD D +L G+H+REGL+ +I+V VP PEFEGQTKTRLGN EVR++V+
Sbjct: 319 LNVVSRKAKLLKDSDPNLGGDHIREGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVENI 378
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ + ++E +P VL SI +K+ SA KAA AAKRAR++VR+K+VL S+ LPGKL+DCSS
Sbjct: 379 ANDAVAGHMEFNPSVLKSIFAKAQSAFKAAEAAKRAREMVRRKTVLTSNRLPGKLSDCSS 438
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERK-DEAAMYKNEEIQNLI 543
+ +++EIF+VEGDSAGGS KQGRDR FQA+LPLRGKI+NVERK D AA+YKN EI N+I
Sbjct: 439 SDADQTEIFLVEGDSAGGSCKQGRDRGFQAVLPLRGKIMNVERKLDAAALYKNTEITNMI 498
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALGLG GED ALRY KIIILTDADVDGAHIRTLLLTF YRYQ+ LF++G +Y V
Sbjct: 499 SALGLGGMGEDLDTTALRYSKIIILTDADVDGAHIRTLLLTFLYRYQRDLFEKGYVYAAV 558
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKV GK+ YCYD+ +L++V S P IQRFKGLGEMMP QLW TTLNP+ R
Sbjct: 559 PPLYKVVVGKKETYCYDEDDLQEVLVSLPEGGAKHIQRFKGLGEMMPEQLWSTTLNPKTR 618
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
+LK+L ++DA+ AN +FS+LM V+ R++LI + + L ++D
Sbjct: 619 VLKRLTVDDASAANHMFSTLMSKDVEPRRKLITDEGSTLASID 661
>gi|307105660|gb|EFN53908.1| hypothetical protein CHLNCDRAFT_48978 [Chlorella variabilis]
Length = 663
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/666 (56%), Positives = 479/666 (71%), Gaps = 49/666 (7%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S +YG++QIQVL+GLE VRKRP MYIGSTG RGLHHLVYEILDNA+DE QAG+A+ + V
Sbjct: 17 STSYGAQQIQVLQGLEPVRKRPGMYIGSTGQRGLHHLVYEILDNAIDEVQAGFATEVHVE 76
Query: 134 L--------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L ++DN IP D+HP T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVG
Sbjct: 77 LNLDTGWVTISDNGRGIPTDVHPVTGKSALETVLTVLHAGGKFGGDSSGYSVSGGLHGVG 136
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
LSVVNALS+ LEV+VWR ++ Q++SRG + L ++GTR+RF D +
Sbjct: 137 LSVVNALSDELEVSVWRGRSQFSQRFSRGVAQSPL-VEAPAAAGAPKRGTRVRFIYDDTI 195
Query: 244 FT-------------TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE-------KN 283
F+ + FD +TI R+RELAFLN + TI R + +
Sbjct: 196 FSKTHTSPRPPLLPHCSATFDPDTIRSRLRELAFLNSRATIYFRAGNGSSNGAAAAEAEP 255
Query: 284 QYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYAN 343
+ + ++GGL EYV++LN DK P+H+ + F K G+ DT++G+ N
Sbjct: 256 DWEVFHYSGGLAEYVRFLNRDKVPIHEPLCFSKQASGLR-----------RGDTIIGFVN 304
Query: 344 SIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPE 403
SI+TIDGGTHI+G KA+LTRT+NSLG+K K +K+ + +L+GE++REGL ++SV+VPNPE
Sbjct: 305 SIKTIDGGTHIDGTKAALTRTVNSLGRKLKAIKEGESNLAGEYIREGLGAVVSVKVPNPE 364
Query: 404 FEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDL 463
FEGQTKTRLGNPEVR++V+ V + E LE+ P ++IL+K++ A KAA AAK+AR+L
Sbjct: 365 FEGQTKTRLGNPEVRRIVEGVVSSAVGEALEMEPTTFNTILAKAMQAFKAAEAAKKAREL 424
Query: 464 VRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKIL 523
VR+KSVL S+LPGKLADCSST E+EIF+VEGDSAGGS KQ RDRR+QA+LPLRGKIL
Sbjct: 425 VRRKSVLTKSTLPGKLADCSSTNRAETEIFLVEGDSAGGSTKQARDRRYQAVLPLRGKIL 484
Query: 524 NVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLL 583
N D++ +YKN EI NLI LGLG+KGED LRY KIIILTDADVDGAHIRTLLL
Sbjct: 485 N----DDSKLYKNNEIANLIVGLGLGLKGEDAVN--LRYGKIIILTDADVDGAHIRTLLL 538
Query: 584 TFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFK 643
TF +RYQ+ +F++G +YVGVPPLYK++ G++ QYCY + ELK + + Y++QRFK
Sbjct: 539 TFLFRYQRAIFEKGHVYVGVPPLYKLDVGRRAQYCYTEEELKAALAELAPCS-YTMQRFK 597
Query: 644 GLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVN 703
GLGEMMP QLW TTLNPE R L++L I+DAAEA+ +F+ LMG +V R+ELI+ + +
Sbjct: 598 GLGEMMPEQLWSTTLNPETRTLRKLTIDDAAEASHMFALLMGDKVGPRRELIERHGSRLA 657
Query: 704 LDHLDI 709
L+ LDI
Sbjct: 658 LEELDI 663
>gi|30680397|ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332003318|gb|AED90701.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 519
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/469 (77%), Positives = 409/469 (87%), Gaps = 14/469 (2%)
Query: 34 RTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRK 93
R F + V SQ L + N + R FLS TEA +E SK Y SEQIQVLEGL+ VRK
Sbjct: 53 RLKFQLTSVLSQRLIQRNAISSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRK 107
Query: 94 RPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDL 144
RP MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD S IP DL
Sbjct: 108 RPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDL 167
Query: 145 HPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGME 204
HPAT KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME
Sbjct: 168 HPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGME 227
Query: 205 YHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 264
+ Q YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAF
Sbjct: 228 HKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAF 287
Query: 265 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 324
LNPK+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D
Sbjct: 288 LNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVD 347
Query: 325 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 384
+ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSG
Sbjct: 348 VALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSG 407
Query: 385 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 444
EHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+
Sbjct: 408 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESII 467
Query: 445 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 493
SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE S ++
Sbjct: 468 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSGMY 516
>gi|308801547|ref|XP_003078087.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
gi|116056538|emb|CAL52827.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
Length = 684
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/644 (55%), Positives = 468/644 (72%), Gaps = 29/644 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVL+GLE VRKRP MYIGST +GLHHLV+E+LDN+VDE QAG+AS+++V
Sbjct: 57 SGEYDAGSIQVLQGLEPVRKRPGMYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVQVT 116
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D IP D+HP T KS+LETVLT+LHAGGKFGG SSGY VSGGLHGVG+
Sbjct: 117 VDDDGFVTVMDDGRGIPTDVHPVTGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGI 176
Query: 185 SVVNALSESLEVTVWRDG-MEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE +EVTV G M+ Q+ G +++GT +RF PD Q+
Sbjct: 177 SVVNALSELVEVTVHATGNMKEKQQDGSG----------------NKKGTMVRFKPDDQI 220
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F ++FD+N I R++ELAFLN + L+ ++ + + +A GL++YV L
Sbjct: 221 FD-KVKFDNNIIRTRMKELAFLNKGTELHLKTFNTKTKSYVEEKLVYAEGLKDYVLDLTA 279
Query: 304 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
D LH+ + F +++GI ++ +L W +D+YSDT+LGYANSIRTIDGGTHI+G+K SLT+
Sbjct: 280 DATRLHEPITFSGEMEGIRVEGSLCWTADSYSDTLLGYANSIRTIDGGTHIDGLKYSLTK 339
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N+ +K+K +KD D +L G+HVREGL+ +I+V VP PEFEGQTKTRLGN EVR++V+
Sbjct: 340 TINNASRKAKLLKDADSNLGGDHVREGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVEN 399
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ + + E + L ++ +K+ SA KAA AAKRAR+LVR+K+VL ++ LPGKL+DCS
Sbjct: 400 IASDAVMGHFEFNSADLKAVFAKAQSAFKAAEAAKRARELVRRKTVLTANRLPGKLSDCS 459
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERK-DEAAMYKNEEIQNL 542
S+ + +EIF+VEGDSAGGS KQGRDR FQA+LPLRGKI+NVERK D AA+YKN EI N+
Sbjct: 460 SSDADRTEIFLVEGDSAGGSCKQGRDRSFQAVLPLRGKIMNVERKLDAAALYKNTEITNM 519
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALGLG GED ALRY KIIILTDADVDGAHIRTLLLTF YRYQ+ LF++G +Y
Sbjct: 520 ISALGLGTMGEDLDTSALRYSKIIILTDADVDGAHIRTLLLTFLYRYQRDLFEKGFVYAA 579
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
VPPLYKV GK+ YCYDD +L++V ++ P A IQRFKGLGEMMP QLW TTL+P+
Sbjct: 580 VPPLYKVAVGKKETYCYDDDDLQRVLAALPEGANKHIQRFKGLGEMMPEQLWSTTLDPKT 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+LK+L ++DA+ AN +FS+LM VD R+ LI + A L ++D
Sbjct: 640 RLLKRLTVDDASAANHMFSTLMSKEVDPRRRLIEEEGAALASID 683
>gi|299117008|emb|CBN73779.1| DNA topoisomerase IV subunit B [Ectocarpus siliculosus]
Length = 688
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/653 (53%), Positives = 455/653 (69%), Gaps = 18/653 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG++QI VLEGLE VRKRP MYIGSTGP+GLHHLV+E++DNA+DEA AGY + V
Sbjct: 38 VDGDYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNAIDEALAGYCDTVYV 97
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L D S IP D+HP T KSALETVLTVLHAGGKFGG SGY VSGGLHGVG
Sbjct: 98 TLEEDGSCTVRDNGRGIPCDIHPRTKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVG 157
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS+ EV V R G + + RGK T +++ GT +RF PD ++
Sbjct: 158 VSVVNALSQWAEVEVVRGGKRHSLSFERGK--TQGDLFTADAGAEEAGGTAVRFLPDPEI 215
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE----DSDPEKNQYNEYFFAGGLEEYVQ 299
F T +F+ ++GR+ ELA+LN ++I + D D + Y GG++E+V+
Sbjct: 216 FKTTTEFEFERLSGRMDELAYLNAGVSIVMADARSGVDEDGNFKKTETYLHKGGVQEFVE 275
Query: 300 WLNTDKKPLH---DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+ +K+ LH V+ + DG+ ++ L W SD Y+D+++ +AN IRT DGGTH+EG
Sbjct: 276 LMCKEKQHLHPDMKVIRALGERDGVQVEACLSWSSDMYTDSLVSFANGIRTGDGGTHLEG 335
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+K+ +TRT+NS+G+KS +KD +L G+ VREGLT ++SV+VP PEFEGQTK RLGNPE
Sbjct: 336 LKSIVTRTVNSMGRKSGKLKDSQSNLGGDFVREGLTAVVSVKVPEPEFEGQTKNRLGNPE 395
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR +VD V E L + E HP +L +IL K+ SA AA AAK ARD+VR+KS+L S+ LP
Sbjct: 396 VRGIVDSIVGEELVKLFEWHPKILGAILDKASSAQAAAAAAKAARDMVRRKSLLTSTVLP 455
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADC+S P ESEI+IVEGDSA GSAKQGRDRR QAILPLRGKILN+E+ +Y+N
Sbjct: 456 GKLADCASRDPVESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASERIYQN 515
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E+Q LI ALGLG+KG +F +LRYH+I+++TDADVDG+HIR LLLTFF+RYQ++L +
Sbjct: 516 NELQALISALGLGIKGNEFDASSLRYHRIVVMTDADVDGSHIRILLLTFFFRYQRSLIEN 575
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +++ PPLYK+++GK +Y Y E S P++ +QRFKGLGEMMP QLW+T
Sbjct: 576 GFVFIACPPLYKIKQGKTEKYVYTQEECDSAVSELPASPAVQLQRFKGLGEMMPQQLWDT 635
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
T++P +R LK + +EDAA A+ +FS LMG V RKE I AN + LD LD
Sbjct: 636 TMDPARRTLKLVTVEDAAAADRIFSVLMGDNVGPRKEFINEHANNLKLDDLDF 688
>gi|159464611|ref|XP_001690535.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
gi|158280035|gb|EDP05794.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
Length = 649
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/650 (56%), Positives = 470/650 (72%), Gaps = 24/650 (3%)
Query: 83 QVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-------- 134
QVLEGLE VRKRP MYIG TG GLHHL++E++DNAVDE QAG+AS +EV +
Sbjct: 1 QVLEGLEPVRKRPGMYIGGTGSDGLHHLIWEVVDNAVDEVQAGHASAVEVDVDLSSGWVS 60
Query: 135 LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 192
+ DN IP+D+HP T KSALETVLTVLHAGGKFGG +SGY VSGGLHGVG+SVVNALS
Sbjct: 61 VVDNGRGIPVDVHPVTGKSALETVLTVLHAGGKFGGDNSGYKVSGGLHGVGISVVNALSS 120
Query: 193 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQF 250
LEVTVWR G Y Q+YSRG P+ L +LP S++ R GT++RF D +F + +
Sbjct: 121 ELEVTVWRAGSRYSQRYSRGAPLEELRVQLLPPGSEEAGRSGTQVRFLYDASIFAKDVAY 180
Query: 251 DHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD 310
+ IA R+ ELAFLN + TI R + Q+ + ++GGL E+V L PLH+
Sbjct: 181 SADVIATRLHELAFLNARATIRFRALRRGKPEGQWQVFQYSGGLREFVGCLQAAYTPLHE 240
Query: 311 --VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL 368
VV G+ ++ ALQW +D++ + + G+ANSI T+DGGTH+EG++A LTR + L
Sbjct: 241 ALVVTRADGGSGVVVEAALQWAADSFKEEVRGFANSIHTVDGGTHMEGLRAGLTRAVTQL 300
Query: 369 GKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEY 428
G+K+K +KD D LSGEHVREGL ++SV+VPNPEFEGQTKTRLGNPEVRK+V+ +V E
Sbjct: 301 GRKAKQIKDSDPPLSGEHVREGLGAVVSVKVPNPEFEGQTKTRLGNPEVRKIVENAVYEA 360
Query: 429 LTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS--SSLPGKLADCSSTT 486
+ E+LE HP L ++ +K+L++ +AA AA++AR+LVR+K+ L + S+LPGKLADC+ST
Sbjct: 361 VGEWLEAHPAALAALCAKALTSARAAEAARKARELVRRKTSLFTGRSTLPGKLADCTSTN 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA--AMYKNEEIQNLIR 544
EE+EI+IVEGDSAGGSAKQ RDRRFQAILPL+GKILNVER +A MYKN EI NLI
Sbjct: 421 REETEIYIVEGDSAGGSAKQARDRRFQAILPLKGKILNVERLTDANELMYKNTEISNLI- 479
Query: 545 ALG----LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
ALG +GV+ + L Y KI++LTDADVDGAHIRTLLLTF +R++ LF G +Y
Sbjct: 480 ALGYERTVGVRSRCHAFKLLLYGKIVVLTDADVDGAHIRTLLLTFLFRHRPQLFAAGRVY 539
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
V VPPLYKVERGK V + + DAEL V + YS+QRFKGLGEMMP QLW+TTLN
Sbjct: 540 VAVPPLYKVERGKSVWWAHSDAELAALVSEQRLAPGGYSVQRFKGLGEMMPQQLWDTTLN 599
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R+L++L + D +EA+ + + LMG +V+ RK LI+ + ++LD LD+
Sbjct: 600 PESRLLRRLTVRDVSEADSMLTMLMGTKVEPRKALIEAYSRRLSLDALDV 649
>gi|302830013|ref|XP_002946573.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
gi|300268319|gb|EFJ52500.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
Length = 676
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/659 (54%), Positives = 466/659 (70%), Gaps = 35/659 (5%)
Query: 83 QVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV--------AL 134
QVLEGLE VRKRP MYIG TG GLHHLV+E++DN+VDE QAG+A+ +EV +
Sbjct: 21 QVLEGLEPVRKRPGMYIGGTGSEGLHHLVWEVVDNSVDEVQAGHATRVEVQVDLSSGWVV 80
Query: 135 LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 192
+ D+ IP+D+HP T KSALETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE
Sbjct: 81 VTDDGRGIPVDVHPVTGKSALETVLTVLHAGGKFGGEDSGYKVSGGLHGVGISVVNALSE 140
Query: 193 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSK--DRQGTRIRFWPDKQVFTTAIQF 250
L VTVWR G+ Y Q+YSRG + + L DS+ DR GT++ F D+ +F + + +
Sbjct: 141 QLTVTVWRAGVRYSQRYSRGVALEEVQRTELQPDSEEADRTGTQVCFLYDRTIFASDVSY 200
Query: 251 DHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD 310
+ + IA R+ ELAFLN T+ ++ + F+GGL E+V L + PLH+
Sbjct: 201 NPDIIATRLHELAFLNSSATMRFNATRKGQLDGEWQVFQFSGGLREFVGCLQSGYTPLHE 260
Query: 311 VVGFRKD--VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL 368
+ + G+ + ALQW +D++ + + G+ANSI T DGGTH++ ++++LTRT+ +L
Sbjct: 261 AICVSRSDPPSGVVVHAALQWAADSFREEIRGFANSIHTADGGTHLDALRSALTRTITAL 320
Query: 369 GKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEY 428
KK K +K+ D LSGEH+REGL +I+V+VPNPEFEGQTKTRLGNPEVRK+V+ +V E
Sbjct: 321 AKKMKLIKEGDPPLSGEHIREGLGAVIAVQVPNPEFEGQTKTRLGNPEVRKIVEATVAEA 380
Query: 429 LTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPE 488
+ E+LE HP L ++L K+L+A +AA AA++AR+L+R+K+ L S LPGKLADC+S +
Sbjct: 381 VGEWLEAHPADLSALLGKALTAARAADAARKARELIRRKTSLSRSMLPGKLADCTSEERD 440
Query: 489 ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL 548
+EI++VEGDSAGGSAKQ RDRRFQA+LPL+GKILNVER AAMYKN EI +LI ALGL
Sbjct: 441 RTEIYLVEGDSAGGSAKQARDRRFQAVLPLKGKILNVERVAGAAMYKNAEISSLIVALGL 500
Query: 549 G-------------VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
G V D +AL Y KI+ILTDADVDGAHIR LLLTF +RY+ LF
Sbjct: 501 GTDRAPALATRGPDVAVRDTASKALEYGKIVILTDADVDGAHIRALLLTFLFRYRPQLFY 560
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL----YSIQRFKGLGEMMPV 651
G +YV VPPLYKVERG+ + + + + EL++V S N L YS+QRFKGLGEMMP
Sbjct: 561 AGHVYVAVPPLYKVERGRSLWWAHTEEELRRVVS---ENRLAPGGYSVQRFKGLGEMMPQ 617
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLDHLDI 709
QLW+TTLNP R+L++L + DAAEA+ + +SLMGA+V RK LIQ +N L ++ LD+
Sbjct: 618 QLWDTTLNPATRLLRRLTVRDAAEADALLTSLMGAQVGPRKALIQEYSNRLQSISSLDV 676
>gi|333977511|ref|YP_004515456.1| DNA gyrase subunit B [Desulfotomaculum kuznetsovii DSM 6115]
gi|333820992|gb|AEG13655.1| DNA gyrase, B subunit [Desulfotomaculum kuznetsovii DSM 6115]
Length = 636
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/650 (53%), Positives = 465/650 (71%), Gaps = 31/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E ++ YG+E+IQVLEGLEAVR+RP MYIGSTGPRGLHHLVYE++DN++DEA AG+
Sbjct: 3 EQEMNNRYGAEEIQVLEGLEAVRRRPGMYIGSTGPRGLHHLVYEVVDNSIDEAMAGFCDR 62
Query: 130 IEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + DNS IP+D+HP T A+ETVLT+LHAGGKFGG+ Y VSGGLH
Sbjct: 63 IEVIVHKDNSVTVIDNGRGIPVDIHPKTGLPAVETVLTMLHAGGKFGGTV--YKVSGGLH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALSE LEV + RDG YHQ+Y RGK VT L V + + GT++ F PD
Sbjct: 121 GVGVSVVNALSEWLEVEIRRDGHVYHQRYERGKAVTPLKT----VGTANATGTKVSFKPD 176
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++F + F+H T++ R+REL+FLN + I R E + Q Y GG+ ++V++
Sbjct: 177 AEIFEELV-FNHETLSQRLRELSFLNRGIKIIFRDERT----GQEIVYQHDGGIRDFVRY 231
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN +K+ LH+ V G R D + +++ALQ+ ++ Y +++ Y N+I T+DGGTH G
Sbjct: 232 LNKNKEVLHNRPIYVFGER---DNVQVEVALQY-TEGYVESLFSYVNNIHTVDGGTHEAG 287
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K++LTR +N G+K +K+ +L+GE +REGLT +ISV+VP P+FEGQTKT+LGN E
Sbjct: 288 FKSALTRVINDYGRKYNLLKNGTPALAGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSE 347
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR +VD V + L +LE +P V I+ K+++A +A AA++AR+L R+KS L S+SLP
Sbjct: 348 VRGIVDTVVADGLATFLEENPGVARRIMDKAITAARAREAARKARELTRRKSALESASLP 407
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P ++E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N
Sbjct: 408 GKLADCSDRDPSKTELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKILAN 467
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EEI+ LI ALG G+ GEDF RYH+I++++DADVDGAHIRTLLLTFFYRY + L +
Sbjct: 468 EEIRALITALGTGI-GEDFDLSKARYHRILLMSDADVDGAHIRTLLLTFFYRYMRPLLEA 526
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ PPLY++ +GK +Y Y DAEL+++ + + SIQR+KGLGEM P QLWET
Sbjct: 527 GYVYIAQPPLYRIRKGKVDRYAYSDAELEEILKEIGRDGV-SIQRYKGLGEMNPQQLWET 585
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE+R + ++ IEDA EA+ +FS LMG RV+ R+E I QNA + NLD
Sbjct: 586 TMNPEKRTILKVSIEDAIEADAIFSMLMGDRVEPRREFIQQNARAVRNLD 635
>gi|452820768|gb|EME27806.1| DNA gyrase subunit B [Galdieria sulphuraria]
Length = 711
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/673 (51%), Positives = 466/673 (69%), Gaps = 42/673 (6%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+ QI VL+GLE VRKRP MYIGSTG +GLH LV+E++DN+VDE+ AG+ + + V L
Sbjct: 43 QEYGASQISVLQGLEPVRKRPGMYIGSTGIQGLHQLVFELVDNSVDESIAGFCTKVTVVL 102
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+D S IP+D+H + KSALETVLTVLHAGGKFG S GY VSGGLHGVGLS
Sbjct: 103 HSDKSVSVMDNGRGIPVDMHTTSGKSALETVLTVLHAGGKFG--SGGYHVSGGLHGVGLS 160
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKP-----VTTLTCHVL----PVDSKDR------ 230
VVNALSE L V V R+ Y Q++ RG P V +T +L + DR
Sbjct: 161 VVNALSERLYVGVVRNNQLYEQEFQRGIPLGPMQVCDMTSDLLMEREGIQQYDRGFLQQK 220
Query: 231 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--- 287
GT++ F+PD +F ++ D + +A R ELA+LN L I L +E E + E
Sbjct: 221 SGTKVHFYPDPVIFGETLEMDASFLAKRFDELAYLNAGLQIILYREMHQIEVQESVENGS 280
Query: 288 ----------YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDT 337
+ GG+ E+VQ+L+ +K+ +H+ V + + I ++ ALQW + YS+
Sbjct: 281 QSRKQIHPQVFIHQGGIREFVQFLSKEKQSMHETVYIHRRIKQIEMEAALQWNREQYSEI 340
Query: 338 MLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 397
+LG+ANSIR +DGG H+EG K+ LT+ + + KK T K++ +S +GE +REGL IISV
Sbjct: 341 ILGFANSIRNLDGGVHVEGFKSGLTKCFHQMAKK--TSKNETLSWNGELIREGLIGIISV 398
Query: 398 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAA 457
+VP PEF+GQTKT+LGNPE+R +V+Q + E + ++L+ +P+V ++L K +A +AA AA
Sbjct: 399 KVPEPEFQGQTKTKLGNPEIRGLVEQVIIEEVGDFLQTNPEVFQALLDKVNAAARAAEAA 458
Query: 458 KRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILP 517
KRAR+L+R+KS L S++LPGKLADC++ P+E+E+FIVEGDSAGGSAKQGRDR FQAILP
Sbjct: 459 KRARELIRRKSALESAALPGKLADCATRNPDEAELFIVEGDSAGGSAKQGRDRSFQAILP 518
Query: 518 LRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAH 577
LRGKILNVE+ ++ +YKN EI LI ALG GV FK E LRYH++II+TDADVDGAH
Sbjct: 519 LRGKILNVEKANDVKIYKNAEIHALITALGAGVSDTHFKLELLRYHRVIIMTDADVDGAH 578
Query: 578 IRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNAL 636
IRTLLLTFFYRYQ+ L + G +Y+ PPL+K ERGK +Y +D A L + ++ SNA
Sbjct: 579 IRTLLLTFFYRYQRPLIEHGHLYIACPPLFKFERGKTCKYFFDQASLDRFLEEELASNAK 638
Query: 637 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
Y+IQRFKGLGEMMPV+LW TT+NP+ R LKQ+ I DAAE+N +F+ L+G +VD RK +
Sbjct: 639 YTIQRFKGLGEMMPVELWNTTMNPQTRCLKQVTITDAAESNNLFTMLLGDKVDRRKAFLN 698
Query: 697 NAANLVNLDHLDI 709
A ++ D LDI
Sbjct: 699 EHARSLSWDQLDI 711
>gi|374307331|ref|YP_005053762.1| DNA gyrase subunit B [Filifactor alocis ATCC 35896]
gi|291165885|gb|EFE27932.1| DNA gyrase, B subunit [Filifactor alocis ATCC 35896]
Length = 638
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/640 (54%), Positives = 448/640 (70%), Gaps = 24/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+ I VA+
Sbjct: 11 YGADQIQVLEGLEPVRKRPGMYIGSTGAKGLHHLVYEVVDNAIDEALAGFCKTIYVAIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
N+I P ++HP T KS +ETVLTVLHAGGKFG + GY VSGGLHGVG+SVV
Sbjct: 71 GNAIRVIDDGRGIPTEVHPKTGKSTVETVLTVLHAGGKFG--TGGYKVSGGLHGVGVSVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS VTV R G Y Q++S+G T L V + GT + F PD ++F
Sbjct: 129 NALSTFFRVTVKRGGKIYVQEFSKGISETELQ----EVGVTEETGTMVEFQPDAEIFD-E 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+++ + T+ R+RELAFLN ++I L ED + Q E+ + GGL+E+V +LN +K P
Sbjct: 184 LEYRYETLEYRLRELAFLNKGISIVL--EDKRAGQEQKKEFSYLGGLKEFVVFLNKNKTP 241
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH DV+ F K +D +++A+Q+ +DAY + + +AN+I TI+GG H+ G K +LTRT+N
Sbjct: 242 LHKDVIHFEKQIDEYYLEIAIQY-TDAYIENIYSFANNINTIEGGMHLIGFKTALTRTIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
KKS K+K+ SLSGE VREGLT IIS+++P P++EGQTKT+LGNP+VR VVD +
Sbjct: 301 DYLKKSN--KNKEESLSGEDVREGLTAIISIKLPEPQYEGQTKTKLGNPQVRSVVDSFLA 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
EY YLE +P V I+ K+++A A AAKRARDL R+K VL S+SLPGKLADCS
Sbjct: 359 EYFGAYLEENPQVAKIIIEKAMNARSAREAAKRARDLTRRKGVLDSTSLPGKLADCSERD 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SEI+IVEGDSAGGSAKQGRDR+ QAILPLRGKILNVE+ + +EEI+N+I A
Sbjct: 419 PALSEIYIVEGDSAGGSAKQGRDRKTQAILPLRGKILNVEKSRLDRILTSEEIKNMITAF 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G + GE+F + LRYHKI+I+TDADVDGAHIRTLLLTF +RY K L + G +Y+ PPL
Sbjct: 479 GCSI-GEEFDESKLRYHKIVIMTDADVDGAHIRTLLLTFMFRYMKPLIENGYVYIAQPPL 537
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+K+ RGK+ Y Y++ EL + F IQR+KGLGEM P QLWETT+NP+ R L
Sbjct: 538 FKIHRGKKEVYAYNEKELPAILQEFGEGHKPGIQRYKGLGEMNPEQLWETTMNPDTRTLL 597
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ +ED + A+ FS LMG +V+ R+E I N A V NLD
Sbjct: 598 RVTVEDFSGADDTFSMLMGDKVEPRREFIHNNAQYVKNLD 637
>gi|88602335|ref|YP_502513.1| DNA gyrase, B subunit [Methanospirillum hungatei JF-1]
gi|88187797|gb|ABD40794.1| DNA gyrase subunit B [Methanospirillum hungatei JF-1]
Length = 675
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/675 (51%), Positives = 464/675 (68%), Gaps = 48/675 (7%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S TY SE I++L GLE VR+RPAMYIGST RGLHHLVYE++DN++DEA AGY ++I+V
Sbjct: 6 LSNTYNSENIKILRGLEPVRERPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCTHIQV 65
Query: 133 ALLADNS---------IPID-LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
+ D S IPID + NK+ALETVLTVLHAGGKF ++ Y VSGGLHGV
Sbjct: 66 VIHQDGSVSVEDNGRGIPIDPMKDNDNKTALETVLTVLHAGGKFDKNT--YQVSGGLHGV 123
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS-KDR----------- 230
G+SVVNALS L TVW+DG EY +SRG+P T L + KDR
Sbjct: 124 GVSVVNALSVELTATVWKDGYEYRMFFSRGQPQTDLEKKEEDFEEIKDRYIKRYGSLPDN 183
Query: 231 ----------------QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 274
GT IRF PD ++F T I+FD++ +A R+RELAFLN +TI++
Sbjct: 184 CPETKEEFLNRYLSKISGTMIRFKPDSKIFET-IEFDYDILAHRLRELAFLNSGITISIA 242
Query: 275 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGF-RKDVDG-ITIDLALQWCS 331
E + + + + GG+ EYV++LN + +P+H+ V+ F RKD + + +D+A Q+ +
Sbjct: 243 DERCEDLEECSEVFSYEGGISEYVRYLNHEAQPIHESVISFSRKDEEARVEVDIAFQYAA 302
Query: 332 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 391
AYS+ + Y NS+ T +GGTH+EG +++LT+ +N +GK++K +KD+++SL G+ VREGL
Sbjct: 303 -AYSEKVYTYVNSVNTKEGGTHLEGFRSALTKAINKMGKENKAIKDQNLSLKGDDVREGL 361
Query: 392 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 451
T IISVR+ NP+FEGQTK +LGN EV+ +VD V L EY E HP L +I+ K++ A
Sbjct: 362 TAIISVRMANPQFEGQTKMKLGNSEVKGIVDSLVYASLCEYFEEHPKELAAIVDKAVLAY 421
Query: 452 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 511
+A AA++A++L R+KS L SS LPGKLADCS + E+SEI+IVEGDSAGGSAKQGRDRR
Sbjct: 422 QAREAARKAKELARRKSTLESSGLPGKLADCSERSAEKSEIYIVEGDSAGGSAKQGRDRR 481
Query: 512 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 571
FQAILPLRGKILNVE+ + KN EIQ LI A+G GV GE F E RYH III+TDA
Sbjct: 482 FQAILPLRGKILNVEKATVHKILKNNEIQALISAIGTGV-GESFDIEKARYHHIIIMTDA 540
Query: 572 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 631
DVDGAHI TLL+TFF+RY + L + G IY+ PPLY++ +GKQ +Y Y + E+K++
Sbjct: 541 DVDGAHISTLLMTFFFRYLQPLIEAGYIYLAQPPLYRIAKGKQEKYAYTEEEMKEILQEM 600
Query: 632 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 691
+ ++QR+KGLGEM QLW TT++PE R+LK++VIEDAA AN +F LMG V R
Sbjct: 601 GEKGV-NVQRYKGLGEMNASQLWATTMDPETRVLKRVVIEDAAYANEIFEKLMGDDVTAR 659
Query: 692 KELIQ-NAANLVNLD 705
++ I+ +A + NLD
Sbjct: 660 RDFIKRHAKEVTNLD 674
>gi|289523899|ref|ZP_06440753.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502555|gb|EFD23719.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 645
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 447/642 (69%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + IQ+LEGLEAVR+RP+MYIG TG RGLHHLVYE++DNA+DEA AGY + V +
Sbjct: 17 KEYTANDIQILEGLEAVRRRPSMYIGDTGIRGLHHLVYEVVDNAIDEAMAGYCDQVSVIV 76
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D HP NK A E VLT+LHAGGKF + Y VSGGLHGVG+S
Sbjct: 77 YPDGSVSVEDNGRGIPVDTHPKVNKPAAEVVLTILHAGGKF--DNKAYQVSGGLHGVGVS 134
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LE+ +WRDGME+HQ+YSRG P C + PV DR GT++ F PD +F
Sbjct: 135 VVNALSTWLELIIWRDGMEWHQRYSRGVP----QCELTPVGKADRTGTKVHFLPDDTIFE 190
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
F + ++ R+RE+AFL P L I L+ D N+ + + GG+ +V++LN DK
Sbjct: 191 EK-DFSFDVLSSRLREIAFLVPGLKIDLK----DLRNNKSVAFKYDGGVISFVEYLNRDK 245
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
PL + + + + D + +++ALQ+ +D++ + + +AN I T++GGTH+ G + +LTR
Sbjct: 246 NPLFKEPIYIKGEKDDVLVEVALQY-NDSFQERVFAFANLIHTVEGGTHVVGFRTALTRA 304
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N + ++ K +KDKD +LSG+ ++EGLT IISV++ P+FEGQTKT+LGN +VR +VD
Sbjct: 305 VNEMARRQKLLKDKDANLSGDDLKEGLTAIISVKLKEPQFEGQTKTKLGNSDVRGIVDSI 364
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L +LE PD L I+ K++ A +A AAK+AR+LVR+KS LPGKLADCSS
Sbjct: 365 VYDGLMAFLEEKPDCLRPIVEKAIKARQARDAAKKARELVRRKSAFGGLDLPGKLADCSS 424
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PEE E++IVEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ + N EI+ +I+
Sbjct: 425 KDPEECELYIVEGDSAGGSAKQGRNRTFQAILPLRGKILNVEKARLDKVLSNAEIRTIIQ 484
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ GEDF LRYH++II+TDADVDGAHIRTLLL FFYR+ + + G +Y+ P
Sbjct: 485 ALGCGI-GEDFDVNKLRYHRVIIMTDADVDGAHIRTLLLAFFYRFMPGIIEGGHLYIAQP 543
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY+V+ GK YCY D EL+ + +N S+QR+KGLGEM P QLW+TT++P +R+
Sbjct: 544 PLYRVQAGKSEYYCYSDKELRNMADKL-ANKKISVQRYKGLGEMNPEQLWKTTMDPNERI 602
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
LK++ +EDA A+ F+ LMG +V+ R+E I++ AN V NLD
Sbjct: 603 LKRVDVEDALAADEYFTILMGDKVEPRREFIESHANEVRNLD 644
>gi|392406420|ref|YP_006443028.1| DNA gyrase subunit B [Anaerobaculum mobile DSM 13181]
gi|390619556|gb|AFM20703.1| DNA gyrase, B subunit [Anaerobaculum mobile DSM 13181]
Length = 645
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/643 (52%), Positives = 451/643 (70%), Gaps = 25/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + IQ+LEGLEAVR+RP+MYIG TG RGLHHLVYE++DNA+DEA AGY +I V
Sbjct: 16 AKQYTANDIQILEGLEAVRRRPSMYIGDTGMRGLHHLVYEVVDNAIDEAMAGYCDHIVVT 75
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L AD S IP+D+HP NK A E VLT LHAGGKF + Y VSGGLHGVG+
Sbjct: 76 LYADGSVSVEDNGRGIPVDMHPKVNKPAAEVVLTTLHAGGKF--DNKAYQVSGGLHGVGV 133
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LE+TVWRDG+E+HQ+YSRG P + L V +R GT++ F PD +F
Sbjct: 134 SVVNALSSWLELTVWRDGIEWHQRYSRGVPQSELKA----VGKAERTGTKVHFMPDDAIF 189
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
F + ++ R+RE+AFL P +TI L+ D + N+ + + GG+ +V++LN D
Sbjct: 190 EER-DFSFDVLSARLREIAFLVPGITIELK----DLKSNKSMTFRYEGGVVSFVKYLNRD 244
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K L + + + DG+ +++ALQ+ +D++ + + +AN I T++GGTH+ G + +LTR
Sbjct: 245 KIALFAEPIYISGEKDGVLVEVALQY-NDSFQERVFAFANLIHTVEGGTHVIGFRTALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N + ++ K +KDKD +LSG+ ++EGLT IISV++ P+FEGQTKTRLGN +VR +VD
Sbjct: 304 AINEMARRQKLLKDKDPNLSGDDLKEGLTAIISVKLKEPQFEGQTKTRLGNSDVRGIVDS 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V + L LE PD L I+ K++ A +A AAK+AR+LVR+KS LPGKLADCS
Sbjct: 364 IVYDELMATLEEKPDYLRPIVEKAIKARQARDAAKKARELVRRKSAFGGLDLPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE EI+IVEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 424 SKDPEECEIYIVEGDSAGGSAKQGRNRTFQAILPLRGKILNVEKARLDKVLSNAEIRTII 483
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
+ALG G+ GEDF LRYH++II+TDADVDGAHIRTLLL FFYR+ + +EG +Y+
Sbjct: 484 QALGCGI-GEDFDISKLRYHRVIIMTDADVDGAHIRTLLLAFFYRFMPRIIEEGHLYIAQ 542
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V+ GK+ YCY D EL+ + S+ ++QR+KGLGEM P QLW+TT++P +R
Sbjct: 543 PPLYRVQVGKKEYYCYSDKELRNLMERL-SDKKATVQRYKGLGEMNPEQLWKTTMDPNER 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+LK++ IEDA A+ F+ LMG +V+ R+E I+ AN V NLD
Sbjct: 602 ILKRVDIEDALAADEYFTILMGDKVEPRREFIEAHANEVRNLD 644
>gi|335039151|ref|ZP_08532333.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
gi|334180961|gb|EGL83544.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
Length = 637
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/640 (51%), Positives = 441/640 (68%), Gaps = 20/640 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHH+V+EI+DN+VDEA AG+ + I V +
Sbjct: 7 TYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHMVWEIVDNSVDEALAGFCTEIHVTVH 66
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+ +H + A+E ++TVLHAGGKFGG GY VSGGLHGVG SV
Sbjct: 67 EDNSVTVSDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGE--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V RDG Y+Q+Y RG P L + R GT I F PD ++F
Sbjct: 125 VNALSEWLEVKVHRDGHIYYQRYRRGVPEFDLKV----IGQTARTGTTITFKPDPEIFEE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+FD+ T+ R+RE+AFLN L I + D E+ Q + + + GG+ +V+++N ++
Sbjct: 181 TTEFDYETLRNRLREIAFLNKGLKIIFK--DERMEQAQPDIFVYEGGIASFVEYINRARE 238
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + + +G+ +++ALQ+ +D+++ + +AN+I T +GGTH G K++LTR +N
Sbjct: 239 VLHEPIYIEDEKEGVYVEIALQY-NDSFASNLFSFANNIHTYEGGTHESGFKSALTRVIN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+K +K+ D +L+G+ VREGLT +ISV++P+P+FEGQTKT+LGN EVR + +
Sbjct: 298 EYGRKQGLIKETDNNLTGDDVREGLTAVISVKIPDPQFEGQTKTKLGNSEVRGITENVFA 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
++ +L +P V IL K+L A +A AAK+AR+L R+K+ L SSLPGKLADCSS
Sbjct: 358 KHFFTFLNENPSVAKKILEKALMAQRAREAAKKARELTRRKNALEVSSLPGKLADCSSRD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N EI+ +I AL
Sbjct: 418 PSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEIRAIITAL 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F RYHK+II+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPL
Sbjct: 478 GTGI-GDEFDINKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMKPLIERGYVYIAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ +GK+V Y Y D EL++ P N +IQR+KGLGEM P QLWETT++PE R L
Sbjct: 537 YKITQGKKVLYAYSDRELERKLKELPDNPKPTIQRYKGLGEMNPTQLWETTMDPESRTLL 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ + DA EA+ +F +LMG +V+ R+E IQ A V NLD
Sbjct: 597 QVSLTDAVEADAIFETLMGDQVEPRREFIQQHAKYVRNLD 636
>gi|160331171|ref|XP_001712293.1| gyrB [Hemiselmis andersenii]
gi|159765740|gb|ABW97968.1| gyrB [Hemiselmis andersenii]
Length = 688
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/650 (53%), Positives = 451/650 (69%), Gaps = 27/650 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + +I VLEGLE VR+RP ++IGSTG +GLHHL YEI+DN+VDEA G+ +I ++L
Sbjct: 47 YDATKITVLEGLEPVRRRPGVFIGSTGTKGLHHLAYEIIDNSVDEALGGFCDDILISL-N 105
Query: 137 DNS----------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IPID HP T K+ALETV+T+LHAGGK GY VSGGLHGVG+SV
Sbjct: 106 DNSTLTIKDKGRGIPIDTHPVTGKTALETVMTILHAGGK--FGGGGYKVSGGLHGVGVSV 163
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE L + R ++ RGK + + + K++ GT + F PD Q+F++
Sbjct: 164 VNALSEFLHINTRRLEKGCSMRFVRGKTIGEIKAKKRNFNFKNKNGTSVNFKPDFQIFSS 223
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA--GGLEEYVQWLNTD 304
+D + GR+ ELAFLN L + L+ D K NE F GG+ EY+ L+
Sbjct: 224 TFIYDPFILGGRLNELAFLNSNLKLILQ----DRRKKNINESIFVHNGGISEYIFSLSKK 279
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K PLH + K++ GI++ +ALQW +D + +L +AN+IRTI+GGTH++ +K +TRT
Sbjct: 280 KTPLHKTISIEKELKGISVQVALQWTTDHSQENILSFANNIRTIEGGTHLDSLKIVITRT 339
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
LN G+K+ KD +LSGE +REGLT IISV++P PEFEGQTK++LGNP+VR +VD
Sbjct: 340 LNFFGRKTGKFKDNFRNLSGEFIREGLTGIISVKIPEPEFEGQTKSKLGNPDVRSIVDTI 399
Query: 425 VQEYLTEYLELH-PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V +YL + E D SIL K++ A +A+ AAK+AR+LVR+KSVL ++LPGKLADCS
Sbjct: 400 VSDYLKNFFETQGKDACLSILEKAIEAYQASEAAKKARELVRRKSVLEFTTLPGKLADCS 459
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P +SEIFIVEGDSAGGSAKQ RDR FQAILPLRGKI+N+E+ DE +YKN EIQ LI
Sbjct: 460 LKDPNKSEIFIVEGDSAGGSAKQARDRMFQAILPLRGKIINIEKTDETRIYKNTEIQALI 519
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALGLG K E+F LRY +III+TDADVDGAHIRTLLLTFFYRYQK L ++G +Y+
Sbjct: 520 SALGLGTKKENFDINRLRYRRIIIMTDADVDGAHIRTLLLTFFYRYQKKLIEKGLVYIAC 579
Query: 604 PPLYKVER-GKQVQ----YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
PPLYK+E GK +Q YCY DAEL+ S ++QRFKGLGEMMP QLWETT+
Sbjct: 580 PPLYKIEETGKNLQNFKNYCYSDAELEFSLSKHIKK--LNVQRFKGLGEMMPEQLWETTM 637
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 708
+PE+R+LK++ + D +AN +F+ LMG +V RKE IQ A+ +NL+++D
Sbjct: 638 DPEKRVLKRVEVSDIEKANKIFNVLMGDKVFARKEFIQIHADKMNLENID 687
>gi|323450751|gb|EGB06631.1| hypothetical protein AURANDRAFT_29093 [Aureococcus anophagefferens]
Length = 698
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/706 (50%), Positives = 471/706 (66%), Gaps = 55/706 (7%)
Query: 44 SQVLTRSN-VVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGST 102
++VL R+ + PR+ ++ T ++ + YG+ QI VLEGLEAVRKRP MYIGST
Sbjct: 6 ARVLRRAGGLSAPRSSAATRTTTRLYEAT--TGAYGAGQITVLEGLEAVRKRPGMYIGST 63
Query: 103 GPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSAL 153
GP+GLHHL +EILDN++DE AG+A+ + V L AD S IP DLHP T KSAL
Sbjct: 64 GPKGLHHLCFEILDNSIDEVMAGHATKVAVELRADGSCAVGDDGRGIPCDLHPQTGKSAL 123
Query: 154 ETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK 213
ETVL VLHAGGKFGG+ SGY VSGGLHGVGLSVVNALS L+V V RDG +SRG
Sbjct: 124 ETVLCVLHAGGKFGGAESGYRVSGGLHGVGLSVVNALSHQLDVEVTRDGSVASMAFSRGT 183
Query: 214 PVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 271
P +T VD+ GTR+ F PD +F + FD++ +A R+ ELAFLN + +
Sbjct: 184 PTGDMT----RVDAAPGAATGTRVVFSPDGDIFEKTV-FDYDVLAARMDELAFLNAGVEL 238
Query: 272 AL----------RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG-------- 313
+L +K D P + + GG+ EY +L ++K PLH +G
Sbjct: 239 SLTDFREPKKKKKKGDGGPRVDVFRH---DGGISEYADFLTSEKTPLHAALGPSVTKGKH 295
Query: 314 ------FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
R DG+ ++ AL+W SDAY++ + +AN IRT DGGTH++G+++ + R++N+
Sbjct: 296 TKEAFVARGTKDGVEVECALRWSSDAYAEVTVSFANGIRTADGGTHVDGLRSVVARSVNA 355
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
K+S + K + + GE+VREGLT ++ V VP PEFEGQTKTRLG+P VR+VVD V
Sbjct: 356 AAKRSPSGKSDNAYVPGEYVREGLTAVLLVNVPEPEFEGQTKTRLGSPGVRQVVDAVVGA 415
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
L + E HP L +I+ K+L+A KAA AAK ARDLVR+KS+L ++ LPGKLADCS
Sbjct: 416 ALQQLFEWHPQALKAIVDKALAAQKAAGAAKAARDLVRRKSLLATTVLPGKLADCSLRDA 475
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILP----LRGKILNVERKDEAAMYKNEEIQNLI 543
SEIFIVEGDSA GSAKQGRDR QAILP LRGKILNVE+ +Y N E+Q LI
Sbjct: 476 ALSEIFIVEGDSAAGSAKQGRDRESQAILPLRAVLRGKILNVEKCAPERIYLNAELQALI 535
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALGLGV+GE+F ++ LRYH+I+I+TDADVDGAHIR L+LTFFYRYQ++L ++G +++
Sbjct: 536 SALGLGVRGEEFNRDNLRYHRIVIMTDADVDGAHIRALILTFFYRYQRSLIEDGHVFIAC 595
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKV RG++ YC+ D +L +++ + +IQRFKGLGEMMP QLW TT++P R
Sbjct: 596 PPLYKVSRGRKDTYCWSDDDL---EAALAGDGKATIQRFKGLGEMMPNQLWATTMDPTAR 652
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
++Q+V++DAA+A+ V + LMG V RKE I AN V LD D+
Sbjct: 653 KMQQVVVDDAAKADKVITLLMGDSVAERKEYI--VANSVALDAEDL 696
>gi|357419158|ref|YP_004932150.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
gi|355396624|gb|AER66053.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
Length = 635
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/643 (51%), Positives = 444/643 (69%), Gaps = 24/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y ++ IQ+LEGLEAVR+RP MYIG T RGLHHLVYE++DN+VDEA AG+ + IEV
Sbjct: 5 AKQYTAQDIQILEGLEAVRRRPGMYIGDTTTRGLHHLVYEVVDNSVDEALAGWCNRIEVI 64
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D IPID HP T K A E VLT LHAGGKF Y VSGGLHGVG+
Sbjct: 65 IHEDGHVSVEDNGRGIPIDPHPITGKPAAEVVLTTLHAGGKF--DKKAYQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L +TVWRDG E+ Q Y RGKPV+ L C +S +++GT I F PD ++F
Sbjct: 123 SVVNALSEWLNLTVWRDGREWRQSYRRGKPVSELCCG----ESTNKRGTLIEFKPDGEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
F + ++ R RE+AFLNP LTI L+ S EK + + GG+ +V++LN
Sbjct: 179 EETT-FSWDILSSRFREMAFLNPGLTIILKDRISGKEKT----FHYEGGISSFVEYLNKG 233
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K PL V + + DG+++++ LQ+ +D+Y + + +AN I T++GGTH+ G + +LTR
Sbjct: 234 KNPLFTPPVVVKGEKDGVSVEIGLQY-NDSYLERVFAFANLIHTVEGGTHVSGFRTALTR 292
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N + +++K +KDKD +LSG+ ++EGLT +ISV++P P+FEGQTKT+LGN E++ +VD
Sbjct: 293 AINEMARRNKLLKDKDPNLSGDDLKEGLTAVISVKLPEPQFEGQTKTKLGNGEIKGIVDS 352
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ L ++ P++L ++ K++ A A AAK+AR+LVR+K+ L LPGKLADCS
Sbjct: 353 IFYDGLMVEIDERPEILKPVVEKAIKARLAREAAKKARELVRRKTALAGLDLPGKLADCS 412
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESE+FIVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 413 SRNPEESELFIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARMDKVLDNNEVRTII 472
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
+ALG G+ GEDF LRYH+I ++TDADVDG+HIRTLLLT FYR+ L + G +Y+
Sbjct: 473 QALGTGI-GEDFDISKLRYHRIFLMTDADVDGSHIRTLLLTLFYRFMPELIERGHLYIAQ 531
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V+ GK++ YC+ D EL ++ +IQR+KGLGEM P QLWETT++P R
Sbjct: 532 PPLYRVQIGKEIHYCFSDKELNNLRQKVGDGKKLNIQRYKGLGEMNPSQLWETTMDPATR 591
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ K++ IEDA A+ FS LMG +V+ R+E I+ A V NLD
Sbjct: 592 VCKRIEIEDAVAADEYFSILMGDKVEPRREFIEAHAREVRNLD 634
>gi|407472538|ref|YP_006786938.1| DNA gyrase subunit B [Clostridium acidurici 9a]
gi|407049046|gb|AFS77091.1| DNA gyrase subunit B [Clostridium acidurici 9a]
Length = 636
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/646 (50%), Positives = 453/646 (70%), Gaps = 25/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + TYG+EQIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DN++DEA AG I
Sbjct: 4 NQQNVTYGAEQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSIDEALAGRCDTI 63
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
++++ D S IP+ +HP T KS +ETVLTVLHAGGKF G + Y VSGGLHG
Sbjct: 64 KISINEDGSVTVSDNGIGIPVAIHPKTGKSTVETVLTVLHAGGKFDGGA--YKVSGGLHG 121
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+SVVNALSE LEV + R+G + Q++ G P T L + D GT I F PD
Sbjct: 122 VGVSVVNALSEWLEVVIKREGKIHKQRFEIGIPQTELEV----IGDSDETGTTITFMPDA 177
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
+F ++F + T+ R+RELAFLN + I D N+ E+F+ GG++ +V+++
Sbjct: 178 TIFD-EVEFKYETLEYRLRELAFLNKGVKIIF----EDKRTNKEQEFFYEGGIKAFVEYM 232
Query: 302 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N +K +H DV+ F + + ++LALQ+ +D YS+ +L +AN+I T +GG+H+ G++++
Sbjct: 233 NRNKDSIHSDVIYFEGEREDSVVELALQYTTD-YSENILAFANNINTHEGGSHLSGLRSA 291
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N + + +K+KD +L+G+ VREG+T ++SV++ P+FEGQTKT+LGN E+R +
Sbjct: 292 LTRVINDYARTNSLLKEKDENLTGDDVREGITAVLSVKLSEPQFEGQTKTKLGNSEMRGI 351
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ V + L +LE +P I+ K + A + AA++AR+L R+K+VL SS+LPGKLA
Sbjct: 352 VEGVVYDSLNRFLEENPKEAKIIIDKGIKAARVREAARKARELTRRKNVLESSALPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS PE+ EI+IVEG+SAGGSAKQGRDR QAILPLRGKI+N+E+ + ++EI+
Sbjct: 412 DCSERDPEKCEIYIVEGNSAGGSAKQGRDRSTQAILPLRGKIMNIEKARLDKILSSDEIK 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
N+I A G G+ GEDF +RY KI+I+TDADVDGAHIRTLLLTFFYRY K L + G I+
Sbjct: 472 NMITAFGCGI-GEDFDPNKIRYGKIVIMTDADVDGAHIRTLLLTFFYRYMKPLIENGNIF 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYKV++GK +Y YDD EL+ V YS+QR+KGLGEM P QLW+TT+NP
Sbjct: 531 IAQPPLYKVKKGKVEKYAYDDRELEVVLDEIGRTG-YSLQRYKGLGEMNPEQLWDTTMNP 589
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
E R + Q+ IEDAA A+ +F++LMG +V R+E I +NA N+ NLD
Sbjct: 590 ETRTMLQVNIEDAAAADDIFTTLMGDKVKPRREFIEENALNVKNLD 635
>gi|408355369|ref|YP_006843900.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
gi|407726140|dbj|BAM46138.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
Length = 640
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/641 (51%), Positives = 438/641 (68%), Gaps = 20/641 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY I+V +
Sbjct: 9 QQYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGYCDEIQVTI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H T + A+E ++T LHAGGKF +SGY VSGGLHGVG S
Sbjct: 69 EEDNSITVTDNGRGIPVGIHEKTGRPAVEVIMTELHAGGKF--DNSGYKVSGGLHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS SL+V V RD Y+ + RG L + + D GT+I F PD +FT
Sbjct: 127 VVNALSTSLKVYVHRDNNIYYLDFKRG----VLNTEIKVIGQTDTTGTKIHFSPDPDIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+FD+ T+ RIRELAFLN K+ I++ ED K + +++ GG++EYV+++N K
Sbjct: 183 ETTEFDYETLLYRIRELAFLNKKIKISI--EDKRKGKERKQTFYYEGGIKEYVEYMNRSK 240
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ LH+ K+ + I +++ALQ+ S YS + +AN+I T +GG H G K +LTR +
Sbjct: 241 EVLHETFFAEKEEEDIIVEVALQYNS-GYSSNIYSFANNIHTHEGGMHESGFKTALTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+K KD D +L+G+ VREG+T I+S++ P+P+FEGQTKT+LGN E R + D +
Sbjct: 300 NDYARKTKIFKDNDENLTGDDVREGITAIVSIKHPDPQFEGQTKTKLGNSEARTITDSAF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E ++L +PD I++K + A +A +AAK+AR+L R+K L SSLPGKLADCSS
Sbjct: 360 SEMFYKFLVENPDTAKIIVNKGVMASRARMAAKKARELTRRKGALEISSLPGKLADCSSR 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+++I A
Sbjct: 420 DASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNNEIRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G+ GE+F RYHK++I+TDADVDGAHIRTLLLTFFYR+ + L +EG IY+ PP
Sbjct: 480 MGTGI-GEEFDITKARYHKVVIMTDADVDGAHIRTLLLTFFYRFMRPLIEEGYIYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK ++Y YDD+EL+ + P +QR+KGLGEM QLWETT++PE R L
Sbjct: 539 LYKVQQGKTIRYAYDDSELELILRELPKQPKPGLQRYKGLGEMNAEQLWETTMDPENRTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ + DA EA+ +F LMG +V+ R+E IQ NA + NLD
Sbjct: 599 LQVKLNDAIEADQIFDMLMGDKVEPRREFIQENAVYVKNLD 639
>gi|19909557|dbj|BAB86974.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
Length = 545
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/550 (60%), Positives = 419/550 (76%), Gaps = 18/550 (3%)
Query: 114 ILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGG 164
++DNAVD+A AGY + I+V LL D S IP D+HP T KSALETVLT+LHAGG
Sbjct: 1 VVDNAVDKALAGYCNTIDVRLLKDGSCQVTDNGRGIPTDIHPQTGKSALETVLTILHAGG 60
Query: 165 KFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLP 224
KFGG S LHGVG+SVVNALSE +EVTVWR+G + Q++ +G P+ L V P
Sbjct: 61 KFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQGNPIGEL--QVAP 116
Query: 225 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 284
D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN + I E KN
Sbjct: 117 -DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRIDFTDERLQLTKNH 175
Query: 285 ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLG 340
Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ ++ ALQWC DAYSD +LG
Sbjct: 176 EPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQWCVDAYSDNILG 235
Query: 341 YANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVP 400
+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LSGE++REGLT I+SV+VP
Sbjct: 236 FANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIREGLTAIVSVKVP 295
Query: 401 NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRA 460
+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D IL K++ A AA AA+RA
Sbjct: 296 DPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAIQAFNAAEAARRA 355
Query: 461 RDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG 520
R+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG
Sbjct: 356 RELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG 415
Query: 521 KILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRT 580
KILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRYH+I+I+TDADVDGAHIRT
Sbjct: 416 KILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQLRYHRIVIMTDADVDGAHIRT 475
Query: 581 LLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQ 640
LLLTFFYRYQ++L ++G +Y+ PPLYK+ERG+ YCY++ EL++ ++FP NA Y+IQ
Sbjct: 476 LLLTFFYRYQRSLLEQGYMYIACPPLYKLERGRNHYYCYNERELQERIATFPENANYTIQ 535
Query: 641 RFKGLGEMMP 650
RFKGLGEMMP
Sbjct: 536 RFKGLGEMMP 545
>gi|114565581|ref|YP_752735.1| DNA topoisomerase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336516|gb|ABI67364.1| DNA gyrase subunit B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 633
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/644 (51%), Positives = 451/644 (70%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + Y + IQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AG+ IEV
Sbjct: 2 LEREYNASDIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEIVDNSIDEAVAGFCKKIEV 61
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+HPA AL+ +LT LH+GGKFGGS GY++SGGLHGVG
Sbjct: 62 TINQDNSITVCDDGRGIPVDIHPAMGIPALQVILTTLHSGGKFGGS--GYNISGGLHGVG 119
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
LSVVNALS +EV V RDG Y Q Y RG PV + + GT I F+ D ++
Sbjct: 120 LSVVNALSRRMEVRVKRDGHIYQQDYERGNPVNEIRI----IGESKETGTSICFFADDEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I F+ + R+REL+FLN L I+LR D E+ Y E+ ++ GL+++V ++N
Sbjct: 176 FEE-INFEREILLQRLRELSFLNRNLKISLR--DEREEEVFYQEFHYSHGLKDFVAYINK 232
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ ++D + F D + + +A+Q+ +++YS+ + +AN+IRT +GGTH G K +LT
Sbjct: 233 NKEVINDNPIYFENKKDDVIVQVAIQY-NNSYSENLYSFANNIRTQEGGTHEIGFKNALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N KK+ +K+ D +LSGE +REG+ IISV V +P+FEGQTKT+LGN +R +V+
Sbjct: 292 RVINDYAKKNNILKENDNNLSGEDIREGIAAIISVLVKDPQFEGQTKTKLGNTYIRGIVE 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E++ +YL +P +L K++SA +A AAK+AR+L R+K+ L S++LPGKLADC
Sbjct: 352 SIVFEHVEDYLNENPAAARKLLDKAISARRAREAAKKARELTRRKNALESTALPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ P ESE+FIVEGDSAGGSAKQGRDR +QAILPLRGKILNVE+ + +EEI+NL
Sbjct: 412 SNKNPAESELFIVEGDSAGGSAKQGRDRTYQAILPLRGKILNVEKARLDRVLSSEEIRNL 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ GEDF + RYHK+ I+TDADVDG+HIR LLLTFFYRY K L +EG +Y+
Sbjct: 472 ITAMGTGI-GEDFDIKKARYHKLFIMTDADVDGSHIRVLLLTFFYRYMKELIEEGYLYIA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY ++RGK+++Y Y+DA+L S + +SIQR+KGLGEM P QLW TT++ E
Sbjct: 531 QPPLYGLKRGKEIKYFYNDADLNAFLSQ--TEQKWSIQRYKGLGEMDPEQLWTTTMDAES 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R + ++ IEDA +AN +FS+LMG V R+E I+ NA + NLD
Sbjct: 589 RTVLKVTIEDAIKANDIFSALMGDNVQPRREFIESNARYVANLD 632
>gi|403252574|ref|ZP_10918883.1| DNA gyrase subunit B [Thermotoga sp. EMP]
gi|402812064|gb|EJX26544.1| DNA gyrase subunit B [Thermotoga sp. EMP]
Length = 636
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/650 (51%), Positives = 452/650 (69%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEIEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 308 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTNREKTELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF + LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G I
Sbjct: 471 SDIIVAVGTGI-GDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRI 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY+++ GK+ Y Y D EL + K + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIKAGKEEFYVYSDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|268318257|ref|YP_003291976.1| DNA gyrase subunit B [Rhodothermus marinus DSM 4252]
gi|262335791|gb|ACY49588.1| DNA gyrase, B subunit [Rhodothermus marinus DSM 4252]
Length = 649
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/648 (51%), Positives = 448/648 (69%), Gaps = 23/648 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + IQ+LEGLEAVRKRPAMYIG G RGLHHLVYE++DNA+DEA AGY I V
Sbjct: 8 ASNYVASNIQILEGLEAVRKRPAMYIGDVGIRGLHHLVYEVVDNAIDEAMAGYCDRIAVT 67
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D SI P+D HP +SALE V+T LHAGGKF S+ Y VSGGLHGVG+
Sbjct: 68 INEDGSITVEDNGRGIPVDEHPTEKRSALEVVMTTLHAGGKFDKST--YKVSGGLHGVGV 125
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L TV RDG + Q Y+ GKP T+ V P+ + GT ++FWPD +F
Sbjct: 126 SCVNALSRKLIATVKRDGYVWRQTYAYGKP-TSPVERVRPMREDEETGTIVQFWPDPTIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T ++F +T+A R+RELA+LN + I++ + E +Y EY+F GGL E+VQ+L+
Sbjct: 185 KT-VEFRFDTLAERLRELAYLNRGVRISIEDRREEDESLRYEEYYFEGGLVEFVQYLDET 243
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ P+HD V+ + D + +++AL++ +D Y++ +L + N+I T +GGTH+ G + +LTR
Sbjct: 244 RTPIHDEVIYIAGEADDVVVEVALRY-NDGYAENVLSFVNNINTHEGGTHVAGFRTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K+ +K+ LSGE REGLT +ISV+VP P+FEGQTKT+LGN EV+ +V
Sbjct: 303 TLKAYAEKNNLLKNFKGELSGEDFREGLTAVISVKVPEPQFEGQTKTKLGNSEVQGIVAG 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E+L+ +LE HP IL K + A +A +AA++AR+LV++K+ L SSLPGKLADC+
Sbjct: 363 IVSEHLSRWLEDHPREARRILDKVILAAQARVAARKARELVQRKNALNGSSLPGKLADCA 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P + E+F+VEGDSAGGSAKQ R+R FQAILPLRGKILNVE+ + +N+EI+N++
Sbjct: 423 SRDPSKCELFLVEGDSAGGSAKQARNREFQAILPLRGKILNVEKARLDKILENDEIRNIV 482
Query: 544 RALGLGVKG--EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
ALG G+ EDF LRYH+III+TDADVDGAHIRTLLLTFFYR + L + G IY+
Sbjct: 483 TALGTGLATTEEDFDLSKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQLRPLVEGGYIYI 542
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETT 657
+PPLY+V+ GK +Y + D EL+++ P A+ IQR+KGLGEM P QLWETT
Sbjct: 543 ALPPLYRVKVGKTERYAWSDEELRQIVEELTDGQPQRAV--IQRYKGLGEMNPEQLWETT 600
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+NPE R+L+Q+ +EDAA A+ +FS LMG V+ R++ I+ A LD
Sbjct: 601 MNPETRILQQVTVEDAAAADRIFSILMGDAVEPRRKFIERNARYATLD 648
>gi|345304552|ref|YP_004826454.1| DNA gyrase subunit B [Rhodothermus marinus SG0.5JP17-172]
gi|345113785|gb|AEN74617.1| DNA gyrase, B subunit [Rhodothermus marinus SG0.5JP17-172]
Length = 649
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/648 (51%), Positives = 448/648 (69%), Gaps = 23/648 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + IQ+LEGLEAVRKRPAMYIG G RGLHHLVYE++DNA+DEA AGY I V
Sbjct: 8 ASNYVASNIQILEGLEAVRKRPAMYIGDVGIRGLHHLVYEVVDNAIDEAMAGYCDRIAVT 67
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D SI P+D HP +SALE V+T LHAGGKF ++ Y VSGGLHGVG+
Sbjct: 68 INEDGSITVEDNGRGIPVDEHPTEKRSALEVVMTTLHAGGKFDKNT--YKVSGGLHGVGV 125
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L TV RDG + Q Y+ GKP T+ V P+ + GT ++FWPD +F
Sbjct: 126 SCVNALSRKLIATVKRDGYVWRQTYAYGKP-TSPVERVRPMREDEETGTIVQFWPDPTIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T ++F +T+A R+RELA+LN + I++ + E +Y EY+F GGL E+VQ+L+
Sbjct: 185 KT-VEFRFDTLAERLRELAYLNRGVRISIEDRREEDESLRYEEYYFEGGLVEFVQYLDET 243
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ P+HD V+ + D + +++AL++ +D Y++ +L + N+I T +GGTH+ G + +LTR
Sbjct: 244 RTPIHDEVIYIAGEADDVVVEVALRY-NDGYAENVLSFVNNINTHEGGTHVAGFRTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K+ +K+ LSGE REGLT +ISV+VP P+FEGQTKT+LGN EV+ +V
Sbjct: 303 TLKAYAEKNNLLKNFKGELSGEDFREGLTAVISVKVPEPQFEGQTKTKLGNSEVQGIVAG 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E+L+ +LE HP IL K + A +A +AA++AR+LV++K+ L SSLPGKLADC+
Sbjct: 363 IVSEHLSRWLEDHPREARRILDKVILAAQARVAARKARELVQRKNALNGSSLPGKLADCA 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P + E+F+VEGDSAGGSAKQ R+R FQAILPLRGKILNVE+ + +NEEI+N++
Sbjct: 423 SRDPSKCELFLVEGDSAGGSAKQARNREFQAILPLRGKILNVEKARLDKILENEEIRNIV 482
Query: 544 RALGLGVKG--EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
ALG G+ EDF LRYH+III+TDADVDGAHIRTLLLTFFYR + L + G IY+
Sbjct: 483 TALGTGLATTEEDFDLSKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQLRPLVEGGYIYI 542
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETT 657
+PPLY+V+ GK +Y + D EL+++ P A+ IQR+KGLGEM P QLWETT
Sbjct: 543 ALPPLYRVKVGKTERYAWSDEELRQIVEELTDGQPQRAV--IQRYKGLGEMNPEQLWETT 600
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+NPE R+L+Q+ +EDAA A+ +FS LMG V+ R++ I+ A LD
Sbjct: 601 MNPETRILQQVTVEDAAAADRIFSILMGDAVEPRRKFIERNARYATLD 648
>gi|389574651|ref|ZP_10164711.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
gi|388425773|gb|EIL83598.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
Length = 640
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/641 (52%), Positives = 447/641 (69%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 127 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLEV----IGETDVTGTTTHFVPDPEIFTE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 183 TIEFDYDTLANRVRELAFLTKGVNIII--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPVYIEGEKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFTLEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ + P +QR+KGLGEM QLWETT++P+ R L
Sbjct: 539 LYKVQQGKRVEYVYNDKQLDELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPDARTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 599 LQVTLEDAIDADETFEMLMGDKVEPRRNFIEENAQYVKNLD 639
>gi|1622792|gb|AAC44498.1| DNA topoisomerase II subunit B [Thermotoga maritima MSB8]
Length = 636
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/650 (51%), Positives = 452/650 (69%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPMEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 308 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF + LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +
Sbjct: 471 SDIIVAVGTGI-GDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRV 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY+++ G++ Y Y D EL + K + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIKAGREEFYVYSDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|337744370|ref|YP_004638532.1| protein GyrB [Paenibacillus mucilaginosus KNP414]
gi|386720575|ref|YP_006186900.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
gi|336295559|gb|AEI38662.1| GyrB [Paenibacillus mucilaginosus KNP414]
gi|384087699|gb|AFH59135.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
Length = 637
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/646 (52%), Positives = 448/646 (69%), Gaps = 24/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I
Sbjct: 4 NP-GTTYDESQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEVVDNSIDEALAGYCTRI 62
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNSI P+ HP KS LE VLTVLHAGGKFGG GY VSGGLHG
Sbjct: 63 EVIVHKDNSITVIDNGRGIPVGEHPKLKKSTLEVVLTVLHAGGKFGGE--GYKVSGGLHG 120
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+SVVNALS+ LEV V R+G Y Q+Y G P + + + GT++ FWPD+
Sbjct: 121 VGVSVVNALSKKLEVQVKREGKVYQQEYRCGAP----QYDIKEIGESEMTGTQVTFWPDE 176
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++FT ++D +T+ RIRELAFLN + I L E +D + + + GG+ +V+ L
Sbjct: 177 EIFTETTEYDFDTLQSRIRELAFLNKGIEIVLTDERTDISQT----FIYEGGIISFVEHL 232
Query: 302 NTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N +++P+H + + D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++
Sbjct: 233 NQNREPVHQPPIYVEGEKDHIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSA 291
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR LN +K +K+ D +LSG+ VREGLT IISV++P+P+FEGQTKT+LGN EVR +
Sbjct: 292 LTRILNEYARKYNAIKESDANLSGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGI 351
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ E L E+L+ +P + I+ K + A +A AA++AR+L R+KS L SSLPGKLA
Sbjct: 352 VESLFAEKLEEFLQENPAIAKKIVEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+
Sbjct: 412 DCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNAEIR 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFF+RY + L + G +Y
Sbjct: 472 AIITALGTGI-GEDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRKLIEAGFVY 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYK+ER K ++Y Y+D + + + + F A ++QR+KGLGEM P QLWETT++P
Sbjct: 531 IAQPPLYKLERNKTIRYAYNDKQREAIMAEFGEGAKVNVQRYKGLGEMNPGQLWETTMDP 590
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R L Q+ I+DA +A+VVF +LMG V+ R++ IQ A V NLD
Sbjct: 591 DSRTLLQVSIQDAIDADVVFDTLMGDAVEPRRDFIQLHARYVKNLD 636
>gi|451342761|ref|ZP_21911844.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
gi|449338492|gb|EMD17637.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
Length = 641
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/650 (51%), Positives = 448/650 (68%), Gaps = 22/650 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++ V+ +Y IQVLEGLE VRKRP MYIG+T RGLHHLV+EI+DN++DEA AG+
Sbjct: 1 MEDTRVNHSYSDNDIQVLEGLEPVRKRPGMYIGTTSSRGLHHLVWEIVDNSIDEALAGFC 60
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
S I+V++L DN I P + T S +ET+ TVLHAGGKFG GY VSGG
Sbjct: 61 SEIKVSILKDNIIKVVDNGRGMPTGTNTKTGLSTVETIFTVLHAGGKFG--EGGYKVSGG 118
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRF 237
LHGVG SVVNALSE LEV V RDG Y+Q++ G KPV TL+ + D +D GT + F
Sbjct: 119 LHGVGASVVNALSEYLEVYVHRDGHIYYQRFEDGGKPVNTLS---IIGDCED-TGTTVLF 174
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D +FT +D + + R+RELAFLN L + + D EK + N Y + GGL EY
Sbjct: 175 KADPAIFTETTIYDFDILNQRVRELAFLNKGLKLII--ADEREEKIKENIYHYEGGLREY 232
Query: 298 VQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V +LN +K LHD ++ + +DGI++++A+Q+ +D+Y + +AN+I TI+GG H EG
Sbjct: 233 VAYLNKNKTALHDEIIDCEETIDGISVEVAMQY-NDSYQSNIYSFANNIHTIEGGMHEEG 291
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+A+LTR +N+ G+ S +K+KD +LSGE REGLT IISV+ PNP+FEGQTKT+LGN E
Sbjct: 292 FRAALTRVINNYGRTSGALKEKDENLSGEDCREGLTAIISVKHPNPQFEGQTKTKLGNAE 351
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VRK+ L ++L +PDV I+ K A KA +AAKRAR++ R+K+ L + LP
Sbjct: 352 VRKISRTIFANALDKFLMENPDVAKIIMDKVTLASKARMAAKRAREMTRRKTALDIADLP 411
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P E EI+IVEGDSAGGSAK GRDRR QAILPLRGKILNVE+ + N
Sbjct: 412 GKLADCSSKDPSECEIYIVEGDSAGGSAKSGRDRRTQAILPLRGKILNVEKARLERILSN 471
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EI+++I A G G+ GE+F + LRYHKI+I+TDADVDG HIR L+LTF YRY + L +E
Sbjct: 472 AEIRSMITAFGTGI-GEEFSLDKLRYHKIVIMTDADVDGGHIRILMLTFLYRYLRPLIEE 530
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y PPLY + +GK+ Y Y D EL+K++ +A Y+IQR+KGLGEM P QLW+T
Sbjct: 531 GYVYAAQPPLYLLRQGKEDHYLYSDYELEKLREELGKDAKYNIQRYKGLGEMNPEQLWDT 590
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R+L ++ ++DA EA+++F LMG +V+ R++ I +NA + NLD
Sbjct: 591 TMNPEHRILNRINVDDAMEADLLFDMLMGEKVEPRRDFIRENAKYVENLD 640
>gi|294102629|ref|YP_003554487.1| DNA gyrase subunit B [Aminobacterium colombiense DSM 12261]
gi|293617609|gb|ADE57763.1| DNA gyrase, B subunit [Aminobacterium colombiense DSM 12261]
Length = 634
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 452/643 (70%), Gaps = 25/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y ++ IQVLEGL+AVRKRP MYIG TGPRGLHHLVYE++DN++DEA AGY I V
Sbjct: 5 AKQYTAKDIQVLEGLQAVRKRPGMYIGDTGPRGLHHLVYEVVDNSIDEAIAGYCDKISVV 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP + HP++ + A E VLT+LHAGGKF + Y VSGGLHGVG+
Sbjct: 65 IYEDESVSVADNGRGIPTEPHPSSGRPASEVVLTILHAGGKF--DNQAYKVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LE+T+ R+G+ Q++ RG PVT L+ + + GT +RF PD +F
Sbjct: 123 SVVNALSEWLEITIQRNGLSRTQRFERGVPVTDLS----EGEPSTKTGTYVRFHPDTTIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++F + ++GR+RE+AFLNP L I L D + E+ + GG++ ++++LN
Sbjct: 179 E-EVRFSADILSGRLREMAFLNPGLAITL----EDHRSGKCVEFHYEGGIKTFIEYLNKG 233
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K PL + + + DG ++++ +Q+ +D Y + + +AN I TI+GGTH+ G + +LTR
Sbjct: 234 KTPLFPEPIVIAGEKDGASVEIGIQY-NDGYLERIFAFANMIHTIEGGTHVAGFRTALTR 292
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N + +++K +++KD +LSGE ++EGLTC++S+++ NP+FEGQTKT+LGN E++ + D
Sbjct: 293 AVNEVARRAKILREKDENLSGEDLKEGLTCVLSIKLSNPQFEGQTKTKLGNSEIKGITDS 352
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L YL+ H +VL ++ K++ A +A AAK+AR+LVR K+ + +LPGKLADCS
Sbjct: 353 VVYEGLLAYLDEHQEVLKPVVEKAIRARQARDAAKKARELVR-KTAMTGMNLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P E++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 412 SRDPHVCEVYIVEGDSAGGSAKQGRDRGFQAILPLRGKILNVEKARFDKVLSNNEIRTII 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
+ALG G+ GEDF LRY+KIII+TDADVDGAHI TLLLTFFYRY + L D+G +Y+
Sbjct: 472 QALGCGI-GEDFDHSKLRYNKIIIMTDADVDGAHISTLLLTFFYRYMQDLIDKGHLYLAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V+RGK V YCY + EL+ + S P + S+QR+KGLGEM P QLWETT++P+ R
Sbjct: 531 PPLYRVQRGKNVTYCYSEKELRDIVDSTPDSRRASVQRYKGLGEMNPDQLWETTMDPQNR 590
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+LK++ +EDA A+ FS LMG +V+ R++ I A+ V NLD
Sbjct: 591 VLKRIEVEDAMLADEYFSILMGDKVEPRRDFIAAHAHEVRNLD 633
>gi|15643596|ref|NP_228642.1| DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|418044997|ref|ZP_12683093.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
gi|6831559|sp|P77993.2|GYRB_THEMA RecName: Full=DNA gyrase subunit B; AltName: Full=Topoisomerase II
subunit B
gi|4981365|gb|AAD35915.1|AE001750_9 DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|351678079|gb|EHA61226.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
Length = 636
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/650 (51%), Positives = 452/650 (69%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 308 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF + LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +
Sbjct: 471 SDIIVAVGTGI-GDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRV 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY+++ G++ Y Y D EL + K + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIKAGREEFYVYSDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|138893684|ref|YP_001124137.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
gi|134265197|gb|ABO65392.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
Length = 640
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/650 (53%), Positives = 449/650 (69%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V + Y + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQRVEQAYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V + DNSI P+D+H AT + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 IHVTIGEDNSITIADNGRGIPVDVHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V+RDG ++QKY RG+P T L +D DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQKYERGEPRTDLQV----IDETDRTGTTTRFKPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L E D N+ NEYF+ GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVD---NRKNEYFYEGGIRSYVRH 234
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + KD D +L+GE VREGLT I+S++ P P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKDNDANLTGEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSD 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L HP V I+ K + A +A +AAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLEHPAVARKIVEKGMMAARARVAAKKARELTRRKSALEISNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GEDF RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 471 NEVRAIITALGTGI-GEDFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIER 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ + P+ IQR+KGLGEM P QLWET
Sbjct: 530 GYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAELPAQPKPMIQRYKGLGEMNPEQLWET 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA +A+ F LMG +V+ R++ I +NA + NLD
Sbjct: 590 TMNPETRTLLQVSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLD 639
>gi|196249898|ref|ZP_03148594.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
gi|196210774|gb|EDY05537.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
Length = 640
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/650 (53%), Positives = 449/650 (69%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V + Y + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQRVKQAYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V + DNSI P+D+H AT + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 IHVTIGEDNSITIADNGRGIPVDVHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V+RDG ++QKY RG+P T L +D DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQKYERGEPRTDLQV----IDETDRTGTTTRFKPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L E D N+ NEYF+ GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVD---NRKNEYFYEGGIRSYVRH 234
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + KD D +L+GE VREGLT I+S++ P P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKDNDANLTGEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSD 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L HP V I+ K + A +A +AAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLEHPAVARKIVEKGMMAARARVAAKKARELTRRKSALEISNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GEDF RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 471 NEVRAIITALGTGI-GEDFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIER 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ + P+ IQR+KGLGEM P QLWET
Sbjct: 530 GYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAELPAQPKPMIQRYKGLGEMNPEQLWET 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA +A+ F LMG +V+ R++ I +NA + NLD
Sbjct: 590 TMNPETRTLLQVSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLD 639
>gi|407980739|ref|ZP_11161515.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
gi|407412505|gb|EKF34300.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
Length = 638
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/641 (52%), Positives = 446/641 (69%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 125 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLKV----IGETDVTGTTTHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 181 TTEFDYDTLANRVRELAFLTKGVNIVI--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPVYIEGEKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L ++L +PD I+ K L A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 358 SEALEKFLLENPDAAKKIVEKGLMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ + P +QR+KGLGEM QLWETT++P+ R L
Sbjct: 537 LYKVQQGKRVEYVYNDKQLDELLKTLPQTPKPGLQRYKGLGEMNASQLWETTMDPDARTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 597 LQVTLEDAIDADETFEMLMGDKVEPRRNFIEENAQYVKNLD 637
>gi|194016365|ref|ZP_03054979.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
gi|194011838|gb|EDW21406.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
Length = 640
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/641 (52%), Positives = 447/641 (69%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 127 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLEI----IGETDVTGTTTHFVPDTEIFTE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 183 TIEFDYDTLANRVRELAFLTKGVNIVI--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPVYIEGEKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KV++GK+V+Y Y+D +L ++ + P +QR+KGLGEM QLWETT++P+ R L
Sbjct: 539 LFKVQQGKRVEYVYNDKQLDELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPDARTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 599 LQVTLEDAIDADETFEMLMGDKVEPRRNFIEENAQYVKNLD 639
>gi|357014909|ref|ZP_09079908.1| DNA gyrase subunit B [Paenibacillus elgii B69]
Length = 636
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/645 (51%), Positives = 444/645 (68%), Gaps = 23/645 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I
Sbjct: 4 NP-GTTYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGYCTRI 62
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
V + DNS IP+ +P KS +E VLTVLHAGGKFGG GY VSGGLHG
Sbjct: 63 HVIVHRDNSVTVIDNGRGIPVGENPKLKKSTVEVVLTVLHAGGKFGGE--GYKVSGGLHG 120
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+SVVNALS+ L V V R+G + Q+Y G P L + D GT++ FWPD+
Sbjct: 121 VGVSVVNALSKKLIVEVKREGKVHQQEYRCGVPQQELQV----IGESDETGTKVTFWPDE 176
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
Q+FT ++ + T+ RIRELAFLN + I L E +D ++ +F+ GG+ +V++L
Sbjct: 177 QIFTETTEYSYETLQSRIRELAFLNKGIEITLTDERTDVSQS----FFYEGGIISFVEFL 232
Query: 302 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
N +++ LH + D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++L
Sbjct: 233 NQNREALHQAIYVEGQKDNIQVEIALQY-NDSYTENIYSFANNINTHEGGTHESGFKSAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR LN +K +KD D +L+G+ VREG+T IISV++P P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRILNDFARKFNAIKDSDANLTGDDVREGITAIISVKIPEPQFEGQTKTKLGNSEVRGIV 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ E L E+++ +P + I+ K + A +A AA++AR+L R+KS L SSLPGKLAD
Sbjct: 352 ESLFAEKLQEFMDENPTIARKIIEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLAD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + + EI+
Sbjct: 412 CSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARMDKILSDNEIRA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G +Y+
Sbjct: 472 IITALGTGI-GEDFDIAKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKLIEVGYVYI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK+ER K V+Y Y+D + + + + F +IQR+KGLGEM P QLWETT++PE
Sbjct: 531 AQPPLYKLERNKTVRYAYNDKQREAILAEFGDGVKVNIQRYKGLGEMNPEQLWETTMDPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ I+DA EA+ +F +LMG+ V+ R++ IQ A V NLD
Sbjct: 591 SRTMLQVSIQDAIEADTMFDTLMGSNVEPRRDFIQLHAKYVQNLD 635
>gi|379718020|ref|YP_005310151.1| protein GyrB [Paenibacillus mucilaginosus 3016]
gi|378566692|gb|AFC27002.1| GyrB [Paenibacillus mucilaginosus 3016]
Length = 637
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/646 (52%), Positives = 446/646 (69%), Gaps = 24/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I
Sbjct: 4 NP-GTTYDESQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEVVDNSIDEALAGYCTRI 62
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNSI P+ HP KS LE VLT HAGGKFGG SGY VSGGLHG
Sbjct: 63 EVIVHKDNSITVIDNGRGIPVGEHPKLKKSTLEVVLT--HAGGKFGGDESGYKVSGGLHG 120
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+SVVNALS+ L V V R+G + Q++S G P L + + GT+ FWPD+
Sbjct: 121 VGISVVNALSKKLVVQVKREGKVHQQEFSCGVPQYDLKI----IGETEETGTQATFWPDE 176
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F ++D +T+ RIRELAFLN + I L E SD N + + GG+ +V+ L
Sbjct: 177 EIFKETTEYDFDTLQSRIRELAFLNKGIEIVLTDERSDVS----NSFMYEGGIVSFVEHL 232
Query: 302 NTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N +++PLH+ F + D IT+++ALQ+ +D Y++ + +AN+I T +GGTH G K++
Sbjct: 233 NRNREPLHEPPIFVEGEKDNITVEVALQY-NDTYAENIYSFANNINTHEGGTHESGFKSA 291
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR LN +K T+KD D +LSG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +
Sbjct: 292 LTRILNEYARKYNTIKDNDANLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGI 351
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ + L E+L +P V I+ K + A +A AA++AR+L R+KS L SSLPGKLA
Sbjct: 352 VESLFSDKLEEFLVENPSVAKKIVEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+
Sbjct: 412 DCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNAEIR 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I ALG G+ G+DF+ RYHK+II+TDADVDGAHIRTLLLTFF+RY + L + G +Y
Sbjct: 472 AIITALGTGI-GDDFEITKARYHKVIIMTDADVDGAHIRTLLLTFFFRYMRKLIEAGFVY 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYK+ER K ++Y Y+D + + + + F A ++QR+KGLGEM P QLWETT++P
Sbjct: 531 IAQPPLYKLERNKTIRYAYNDKQREAIMAEFGEGAKVNVQRYKGLGEMNPGQLWETTMDP 590
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R L Q+ I+DA +A+VVF +LMG V+ R++ IQ A V NLD
Sbjct: 591 DSRTLLQVSIQDAIDADVVFDTLMGDAVEPRRDFIQLHARYVKNLD 636
>gi|148269239|ref|YP_001243699.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
gi|147734783|gb|ABQ46123.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
Length = 636
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/650 (51%), Positives = 451/650 (69%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MY+GSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYVGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDVLEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 308 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V ++++E L + + + D++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANSDLVKAILSKIMSTKQAREAAKRAREMVRRKNVLQNTALPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF + LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +
Sbjct: 471 SDIIVAVGTGI-GDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRV 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY+++ G++ Y Y D EL + K + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIKAGREEFYVYSDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|170287901|ref|YP_001738139.1| DNA gyrase subunit B [Thermotoga sp. RQ2]
gi|170175404|gb|ACB08456.1| DNA gyrase, B subunit [Thermotoga sp. RQ2]
Length = 636
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/650 (51%), Positives = 451/650 (69%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDE AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEVLAGYCDWIRVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 308 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF + LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +
Sbjct: 471 SDIIVAVGTGI-GDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRV 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY+++ G++ Y Y D EL + K + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIKAGREEFYVYSDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|157690804|ref|YP_001485266.1| DNA gyrase subunit B [Bacillus pumilus SAFR-032]
gi|157679562|gb|ABV60706.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bacillus pumilus
SAFR-032]
Length = 642
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/641 (52%), Positives = 446/641 (69%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 11 SYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 70
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 71 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 128
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 129 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLEI----IGETDVTGTTTHFVPDPEIFTE 184
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 185 TIEFDYDTLANRVRELAFLTKGVNIII--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 242
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 243 VVHEEPVYIEGERDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 301
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 302 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 361
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 362 SEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 421
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 422 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 481
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 482 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 540
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ S +QR+KGLGEM QLWETT++P+ R L
Sbjct: 541 LYKVQQGKRVEYVYNDKQLDELLKSLSQTPKPGLQRYKGLGEMNAAQLWETTMDPDARTL 600
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 601 LQVTLEDAIDADETFEMLMGDKVEPRRNFIEENAQYVKNLD 641
>gi|312126267|ref|YP_003991141.1| DNA gyrase subunit B [Caldicellulosiruptor hydrothermalis 108]
gi|311776286|gb|ADQ05772.1| DNA gyrase, B subunit [Caldicellulosiruptor hydrothermalis 108]
Length = 637
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/647 (51%), Positives = 450/647 (69%), Gaps = 33/647 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV
Sbjct: 8 SQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVV 67
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLHGVG
Sbjct: 68 IHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGA 125
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + DR GT++ F PD ++F
Sbjct: 126 SVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGTTDRTGTKVTFLPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
T I+FD + I R+RELAFLN + I R+++ P + +YN GG+ E+V++L
Sbjct: 182 ET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPIELKYN-----GGIAEFVKFL 235
Query: 302 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G K +
Sbjct: 236 NRNKEVLHQEPIYIEGEKNDILIEVAVQYTED-FGENIYSFANNIATIDGGTHLIGFKTA 294
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
+T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E R
Sbjct: 295 VTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWA 353
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKL 479
V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LPGKL
Sbjct: 354 VENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKL 413
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++
Sbjct: 414 ADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKL 473
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
LI+ALG+G+ G D + LRYHKIII+ DADVDG+HIRTLLLTFFYRY + L + G I
Sbjct: 474 LPLIQALGVGI-GNDIDLKKLRYHKIIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHI 532
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+ +GKQV+Y Y+D EL+K+ +QRFKGLGEM +LWETT++
Sbjct: 533 YIAQPPLYKITKGKQVRYAYNDKELQKILQEMKDA---QVQRFKGLGEMNAQELWETTMD 589
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 590 PARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLD 636
>gi|27262246|gb|AAN87404.1| DNA gyrase subunit B [Heliobacillus mobilis]
Length = 641
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/641 (52%), Positives = 453/641 (70%), Gaps = 25/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY + QIQVLEGLEAVR+RP MYIGST RGLHHLVYEI+DN++DEA AGY IEV +
Sbjct: 14 TYDASQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCDTIEVIIH 73
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+HP K A+E LTVLHAGGKFGG GY VSGGLHGVGLSV
Sbjct: 74 EDNSIEVSDNGRGIPVDIHPKMGKPAVEVALTVLHAGGKFGGE--GYKVSGGLHGVGLSV 131
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE L+VTV R+G + Q Y RG +T L V + + GT I F PD +F
Sbjct: 132 VNALSEKLKVTVRRNGKVHEQYYERGVTMTDLKV----VGNAESTGTTIYFKPDGLIFE- 186
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+++ + T++ R+REL+FLN + I L+ D Q + + GG+ ++V++LN +K
Sbjct: 187 ELEYSYETLSHRLRELSFLNRGVKITLK----DLRTGQESIFAHEGGIIDFVKFLNRNKD 242
Query: 307 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H V+ F+ + +G+ +++ALQ+ +D YS+T+ YAN+I T +GGTH G K +LTR +
Sbjct: 243 LIHPHVIYFQNEKEGVHVEMALQY-NDGYSETLFSYANNINTQEGGTHESGFKTALTRVI 301
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N G++ +K+ D +LSGE +REG+T +ISV+V P+FEGQTKT+LGN EVR + D V
Sbjct: 302 NDYGRRINQIKENDSNLSGEDIREGITAVISVKVREPQFEGQTKTKLGNSEVRGITDSCV 361
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L+ YLE +P V ++ K+LSA++A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 362 TEGLSTYLEENPSVGKKVIEKALSAMRAREAARKARELTRRKSALESTSLPGKLADCSFK 421
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ LI A
Sbjct: 422 DPSMCELYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKSRLDKILSNEEIRALITA 481
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF RYH++ ++TDADVDG+HIRTLLLTFF+R+ K L + G +Y+ PP
Sbjct: 482 LGTGI-GEDFDLSKARYHRVCLMTDADVDGSHIRTLLLTFFFRHMKPLIENGYVYIAQPP 540
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V++G+ V+Y Y D EL + + + +IQR+KGLGEM P QLW+TT++PE R +
Sbjct: 541 LYQVKKGRDVRYYYHDNELNQYLDKNGRDGV-TIQRYKGLGEMNPEQLWDTTMDPEHRTI 599
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDAAEA +F++LMG RV+ R+E IQ +A ++ NLD
Sbjct: 600 LQVSMEDAAEAESIFTTLMGDRVEPRREFIQSHAKDVRNLD 640
>gi|312621133|ref|YP_004022746.1| DNA gyrase subunit B [Caldicellulosiruptor kronotskyensis 2002]
gi|312201600|gb|ADQ44927.1| DNA gyrase, B subunit [Caldicellulosiruptor kronotskyensis 2002]
Length = 650
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/650 (51%), Positives = 451/650 (69%), Gaps = 33/650 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 18 NTNSQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 77
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 78 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 135
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + DR GT++ F PD
Sbjct: 136 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGTTDRTGTKVTFLPDD 191
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 298
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+V
Sbjct: 192 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPVELKYD-----GGIAEFV 245
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 246 KFLNRNKEVLHQEPIYIEGEKNDILIEIAIQYTED-FGENIYSFANNIATIDGGTHLIGF 304
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 305 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 363
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 476
R V+ V E L +LE +PD+ I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 364 RWAVENLVSERLAAFLEENPDISKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 423
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y N
Sbjct: 424 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSN 483
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+++ LI+ALG+G+ G D + LRYHK+II+ DADVDG+HIRTLLLTFFYRY + L +
Sbjct: 484 DKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMADADVDGSHIRTLLLTFFYRYMRPLIEN 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+ +GKQV+Y Y+D EL+KV +QRFKGLGEM +LWET
Sbjct: 543 GHIYIAQPPLYKITKGKQVRYAYNDKELQKVLQEMKDA---QVQRFKGLGEMNAQELWET 599
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
T++P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 600 TMDPARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLD 649
>gi|219121994|ref|XP_002181340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407326|gb|EEC47263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 727
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/666 (51%), Positives = 443/666 (66%), Gaps = 29/666 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++YG+ QI VL+GL+ VRKRP MYIGSTGP GLHHLV+E++DN VDEA AG+A+ +
Sbjct: 62 AAQSYGAGQITVLKGLDPVRKRPGMYIGSTGPDGLHHLVWEVVDNCVDEALAGHATFVTT 121
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFG--GSSSGYSVSGGLHG 181
+ AD S IP DLH T KSALETVLT LHAGGKF GS+SGY VSGGLHG
Sbjct: 122 TIHADGSLTVTDDGRGIPTDLHSETGKSALETVLTELHAGGKFDNQGSNSGYKVSGGLHG 181
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWP 239
VG+SVVNALSE + V V R Y ++ RG P L + + SK + GT + F P
Sbjct: 182 VGISVVNALSEFVHVKVDRTPELYQMRFERGVPTGPLQNLDKLKTLLSKRKSGTSVTFLP 241
Query: 240 DKQVFT-----TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGL 294
D +VF I FD + + GR+ E+A+LN L + L+ E P + + ++ AGGL
Sbjct: 242 DLKVFKGDNGKPDITFDSSRLKGRMDEIAYLNAGLVLTLKDERKSPGRGRLQVFYHAGGL 301
Query: 295 EEYVQWLNTDKKPLHDVVG-------FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRT 347
EY + L K PL RK D + D AL+W SD Y++++L + N+IRT
Sbjct: 302 AEYAELLCRTKTPLFQGTTSSRKKKPARKQKDSASDDDALRWSSDMYAESILSFCNNIRT 361
Query: 348 IDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 407
DGG+H+EG+KA LTRT+N K+S K+ +L GE +REGLT I+SV V PEFEGQ
Sbjct: 362 RDGGSHVEGLKACLTRTVNQAAKRSNKAKEGAANLPGEFIREGLTAIVSVSVSEPEFEGQ 421
Query: 408 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK 467
TK RLGNPEVR VD + LT+ + P++LD+I +K+ SA AA AAK ARD+VR+K
Sbjct: 422 TKGRLGNPEVRPAVDSLLSAELTKLFDFRPEILDAIYNKASSAQAAAAAAKAARDMVRRK 481
Query: 468 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVER 527
++L S+ LPGKLADC+S PEESEIFIVEGDSA GSAKQGRDRR QAILPLRGKILN+ER
Sbjct: 482 TLLTSTILPGKLADCASRDPEESEIFIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIER 541
Query: 528 KDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFY 587
+Y+N E+Q LI ALGLGVKG +F ++LRY +I+I+TDADVDGAHIR LLLTFFY
Sbjct: 542 AATERIYQNTELQGLISALGLGVKGSEFDPKSLRYGRIVIMTDADVDGAHIRVLLLTFFY 601
Query: 588 RYQKTLFDEGCIYVGVPPLYKVE----RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFK 643
RYQ+ L + G +Y+ PPLYKV R ++ Y ++D E V + S+QRFK
Sbjct: 602 RYQRELVENGHVYIAQPPLYKVSVGSGRSRKEGYAFNDTERNTVMMQALAAGKVSLQRFK 661
Query: 644 GLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVN 703
GLGEMMP QLW TT++PE+R + Q+ + DA+ A+ S LMG V RKE I A +
Sbjct: 662 GLGEMMPEQLWSTTMDPERRTMLQVTVNDASMADQTLSILMGDTVAPRKEFISTQAETLR 721
Query: 704 LDHLDI 709
+D LD+
Sbjct: 722 VDDLDL 727
>gi|269791748|ref|YP_003316652.1| DNA gyrase subunit B [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099383|gb|ACZ18370.1| DNA gyrase, B subunit [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 636
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/645 (50%), Positives = 445/645 (68%), Gaps = 24/645 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PVS+ Y ++ IQVLEGL AVRKRP MYIG G RGLHHLVYE++DNA+DEA AG+ ++
Sbjct: 4 PVSQ-YTAKDIQVLEGLSAVRKRPGMYIGDQGQRGLHHLVYEVVDNAIDEAMAGFCDTVQ 62
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + D S IP ++HP + A E VLTVLHAG KF Y VSGGLHGV
Sbjct: 63 VTVHPDGSVSVEDNGRGIPTEMHPTMGRPAAEVVLTVLHAGAKF--DKKAYQVSGGLHGV 120
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+SVVNALSE LEVT+WR+G E+ Q Y RG PVT L + DR+GT++ F PD +
Sbjct: 121 GVSVVNALSEWLEVTIWRNGKEHRQSYRRGVPVTDLIAG----EDTDRRGTKVHFMPDGE 176
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F+T ++F +T+ GR+RELAFLNP +TI R DP + + F GG+ +V++LN
Sbjct: 177 IFST-LEFSADTLIGRLRELAFLNPGVTIVFRDLRQDPPMER--KLHFEGGIRSFVEYLN 233
Query: 303 TDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ L + + + DG+ +++ALQ+ +D Y + + +AN I T++GGTH+ G + +L
Sbjct: 234 RGKEVLFSPPMVVKGEKDGVIVEVALQY-NDTYLERIFAFANLINTVEGGTHVSGFRTAL 292
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +K K +KDKD + +G+ ++EGLT +ISV++ P+FEGQTKT+LGN +V+ +V
Sbjct: 293 TRLINDQARKEKLLKDKDPNFTGDDLKEGLTAVISVKLLEPQFEGQTKTKLGNGDVKGIV 352
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D V E L LE P +L ++ K++ A +A AAK+ARDLVR+KS + LPGKLAD
Sbjct: 353 DSVVYEGLKVILEDQPQILRPVVEKAVKARQAREAAKKARDLVRRKSAMSGMDLPGKLAD 412
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ PEE E++IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N++++
Sbjct: 413 CSNRRPEECELYIVEGDSAGGSAKMGRDRSFQAILPLRGKILNVEKARLDKILSNDQVRT 472
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I+ALG GV G++F LRYHKI ++ DADVDGAHIRTLLLT F+RY + + G +YV
Sbjct: 473 IIQALGCGV-GDEFDYSKLRYHKIFLMADADVDGAHIRTLLLTLFFRYMPQIIENGHLYV 531
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY+V+ GK V YCY D ELK++ S S+QR+KGLGEM P QLWETT++P
Sbjct: 532 AQPPLYRVQEGKNVHYCYSDRELKEIMQRL-SGRKASVQRYKGLGEMNPEQLWETTMDPA 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R++K++ IEDA A+ +FS LMG V+ R+E I+ +A + NLD
Sbjct: 591 NRVIKRVEIEDAVLADELFSVLMGDAVEPRREFIEAHAKEVRNLD 635
>gi|222528063|ref|YP_002571945.1| DNA gyrase subunit B [Caldicellulosiruptor bescii DSM 6725]
gi|222454910|gb|ACM59172.1| DNA gyrase, B subunit [Caldicellulosiruptor bescii DSM 6725]
Length = 650
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/650 (51%), Positives = 451/650 (69%), Gaps = 33/650 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 18 NTNSQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 77
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 78 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 135
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + DR GT++ F PD
Sbjct: 136 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGTTDRTGTKVTFLPDD 191
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 298
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+V
Sbjct: 192 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPVELKYD-----GGIAEFV 245
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 246 KFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTED-FGENIYSFANNIATIDGGTHLIGF 304
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 305 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 363
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 476
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 364 RWAVENLVSERLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 423
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y N
Sbjct: 424 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSN 483
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+++ LI+ALG+G+ G D + LRYHK+II+ DADVDG+HIRTLLLTFFYRY + L +
Sbjct: 484 DKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMADADVDGSHIRTLLLTFFYRYMRPLIEN 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+ +GKQV+Y Y+D EL+K+ +QRFKGLGEM +LWET
Sbjct: 543 GHIYIAQPPLYKITKGKQVRYAYNDKELQKILQEMKDA---QVQRFKGLGEMNAQELWET 599
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
T++P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 600 TMDPARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLD 649
>gi|73670270|ref|YP_306285.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
gi|72397432|gb|AAZ71705.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
Length = 633
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/641 (53%), Positives = 445/641 (69%), Gaps = 23/641 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ + I V +
Sbjct: 5 QVYDASHIQVLEGLEAVRKRPSMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTIINVTI 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D HP KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPDGSVTVLDNGRGIPVDPHPFHKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVN LSE LEV V R+G +Y Q+Y RGKP VL + + + GT+ F PD+++F
Sbjct: 123 VVNGLSEWLEVEVAREGKKYFQRYDRGKP----KADVLEIGTSETTGTKTTFKPDEKIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T + FD+ ++ R+RELAFLN LTI+L D Q + + GG+ E+V++LN K
Sbjct: 179 T-LDFDYEILSNRLRELAFLNRGLTISLM--DLRTPDGQAETFTYEGGIVEFVKYLNNKK 235
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+PLH + F + D + +++A+Q+ S +Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHAPIYFERQRDDMVVEIAMQYTS-SYAENVYSFANNINTHEGGTHIIGFKTALTRVA 294
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N K +K K+ DI L+G+ VREGLT IISV++ P+FEGQTKTRLGN +V+ +VD V
Sbjct: 295 NDYIKANKLSKE-DIKLTGDDVREGLTAIISVKLMEPQFEGQTKTRLGNSDVKGIVDSLV 353
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L EY E +P V + IL K+L A KA AAK+AR+L R+K+ L S+LPGKLADCS
Sbjct: 354 TDGLAEYFEENPKVANVILEKALLAQKAREAAKKARELTRRKNALEVSTLPGKLADCSEK 413
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P EI+IVEG+SAGGSAKQGRDR FQAILPLRGKILNVE+ A + KNEEI +LI A
Sbjct: 414 NPAACEIYIVEGNSAGGSAKQGRDRSFQAILPLRGKILNVEKSRLAKILKNEEIISLITA 473
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G+ EDF E+ RYHK+II+TDADVDG HIRTLLLT F+RY + L DEG +Y+ PP
Sbjct: 474 IGTGI-SEDFTLESARYHKVIIMTDADVDGEHIRTLLLTLFFRYMRPLIDEGYVYIAQPP 532
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY++++GK Y + D EL+ K L IQR+KGLGEM P QLWETT+NPE R+L
Sbjct: 533 LYRIKKGKAEYYIHSDRELEAKKKELGEKGL-GIQRYKGLGEMNPGQLWETTMNPESRIL 591
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA A+ +F LMG V+ R+ I+ +A +VNLD
Sbjct: 592 LQVTLEDAIRADEIFRVLMGDEVEPRRNFIEAHAKEVVNLD 632
>gi|310657321|ref|YP_003935042.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
gi|308824099|emb|CBH20137.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
Length = 641
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/647 (50%), Positives = 452/647 (69%), Gaps = 22/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN V+ YG+EQIQVLEGL+ VRKRP MYIGSTG RGLHHLVYE++DNA+DEA AG+
Sbjct: 5 ENKVNHAYGAEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEVVDNAIDEALAGHCDK 64
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V++ DN I P+++HP T KS +ETVLTVLHAGGKFG + GY VSGGLH
Sbjct: 65 IYVSIDPDNGITVKDNGRGIPVEIHPKTGKSTVETVLTVLHAGGKFG--AGGYKVSGGLH 122
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALS+ L V V +G Y Q+++ G P T L V +GT +RF PD
Sbjct: 123 GVGVSVVNALSKELIVEVKINGKIYRQEFAYGVPQTELEI----VGETTERGTCVRFMPD 178
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
VF Q+ ++T+ R+RELAFLN + I L ED + + E+ + GGL E+V++
Sbjct: 179 DAVFEET-QYKYDTLEHRLRELAFLNKGIHITL--EDKREDLQKVKEFHYTGGLVEFVRY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K P+HD V+ F K T+++A+Q+ +DAY + + +AN+I T +GG H+ G K
Sbjct: 236 INKNKSPIHDDVIYFEKKQGDYTVEIAMQY-TDAYVENVYSFANNINTHEGGMHLTGFKT 294
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N KKS +K K+ +L GE +REGLT ++S+++P+P++EGQTKT+LGNP+ R
Sbjct: 295 ALTRVINDYAKKSNFLKSKEDNLMGEDIREGLTAVVSIKLPDPQYEGQTKTKLGNPQARS 354
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+ + +T +L+ +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKL
Sbjct: 355 AVETISGDNITIFLDENPASARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKL 414
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC+ P +SEI++VEGDSAGGSAKQGRDR+ QAILPLRGKILNVE+ + ++EI
Sbjct: 415 ADCAEKDPVKSEIYLVEGDSAGGSAKQGRDRKTQAILPLRGKILNVEKSRLDRILSSDEI 474
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+N+I A G G+ E F +E LRYHKI+I+TDADVDGAHIRTL+LTFF+RY + L ++G +
Sbjct: 475 RNMITAFGCGISNE-FDEEKLRYHKIVIMTDADVDGAHIRTLILTFFFRYMRPLIEKGYV 533
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPL+++++G++ +Y Y D EL + + +QR+KGLGEM QLW+TT+N
Sbjct: 534 YIAQPPLFRIKKGRREEYVYSDKELNERLEEIGRSNQVELQRYKGLGEMNAEQLWDTTMN 593
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P R L ++ IEDA+ A+ +FS LMG +V+ R+ IQ NA + NLD
Sbjct: 594 PATRTLLRVTIEDASMADDIFSMLMGDKVEPRRNFIQENAKYVKNLD 640
>gi|220932011|ref|YP_002508919.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219993321|gb|ACL69924.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 637
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 453/643 (70%), Gaps = 24/643 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQI++L+GLEAVRKRP MYIGSTG RGLHHLV+E++DN++DE AGY IEV +
Sbjct: 9 YGAEQIEILKGLEAVRKRPGMYIGSTGIRGLHHLVWEVVDNSIDEYLAGYGDKIEVTINE 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P + HP T A + V+T LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 69 DNSITVEDWGRGIPAEEHPETGLPAAQVVMTTLHAGGKFNNNS--YKVSGGLHGVGISVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE+T + +G EY+Q+Y RG P T + + +R GT I F PD ++F
Sbjct: 127 NALSEWLELTTYWNGNEYYQRYERGYPKTKFQ----KLGTSNRNGTIISFKPDPEIFDVT 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F + T+A R++E AFLN +L++ L + SD K + +Y GG++ +V++LN +++
Sbjct: 183 -EFKYETLAHRLQESAFLNKELSLILIDKRSDKTKKEVFQY--DGGIKAFVEYLNKNRQV 239
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
++ D++ K+ I++ALQ+ ++ Y++ + YAN+I T+DGG H+ G K +LT+ +N
Sbjct: 240 INEDIIYTEKENGDYYIEVALQY-NEGYNERIFSYANNINTVDGGYHLTGFKTALTKAIN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ K++ +K D +L+G VREGLT +++V++PNP+FEGQTK++LGN E+R +V+ ++
Sbjct: 299 NFAKQNNLLKQSDPTLTGNDVREGLTAVVNVKLPNPQFEGQTKSKLGNSEIRSIVESNIY 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+YL+ YL+ +P+V I+ K++ A++A A+K+AR+L R+K+ L S SLPGKLADC+S
Sbjct: 359 DYLSLYLDSNPEVGKKIVDKAIQAIRARQASKKARELTRRKNALNSHSLPGKLADCASRK 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SE+F+VEGDSAGGSAKQGR+R FQAILPL+GKI+NVER + N EI +I AL
Sbjct: 419 PEKSELFLVEGDSAGGSAKQGRNRHFQAILPLKGKIMNVERARLDKILSNNEIATIISAL 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F + LRYHKIII+TDADVDGAHI TLLLT FYRY L EG IY+ PPL
Sbjct: 479 GTGI-GQEFNIDKLRYHKIIIMTDADVDGAHIATLLLTLFYRYMPELIKEGYIYIAQPPL 537
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV K ++Y Y D EL+ +K N YSIQR+KGLGEM P QLWETT+NPE R L
Sbjct: 538 YKVSWKKNIRYLYTDKELESLKREL-ENKSYSIQRYKGLGEMNPRQLWETTMNPETRKLL 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
++ I+D EA+ +F+ LMG+ R+E I + A++V D LDI
Sbjct: 597 RIEIDDEIEADEIFTRLMGSNASLRREFIISNADMV--DELDI 637
>gi|402570644|ref|YP_006619987.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
gi|402251841|gb|AFQ42116.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
Length = 644
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/644 (51%), Positives = 451/644 (70%), Gaps = 23/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y + QI+VLEGLEAVRKRP MYIG+TGPRGLHHLVYEI+DN++DEA AG+ + I+V
Sbjct: 12 ISDNYNAGQIEVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEIVDNSIDEALAGFCNEIDV 71
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+HP T K +E LTVLHAGGKFGGS S Y VSGGLHGVG
Sbjct: 72 IIHQDNSITVVDNGRGIPVDIHPKTGKPGVELALTVLHAGGKFGGSESAYKVSGGLHGVG 131
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
LSVVNALS+ L V V + G YHQ+YS GKP T L + V ++ GT+I F PD ++
Sbjct: 132 LSVVNALSKWLVVEVSKGGHVYHQEYSIGKPTTKL----INVGETNKSGTKISFMPDSEI 187
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F + +D N +A R+REL+FLN +TI L E +D ++ + GG++++V++LN
Sbjct: 188 FEETV-YDFNILAHRLRELSFLNKSVTINLTDERTDVKET----FLHTGGIQDFVRYLNK 242
Query: 304 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K LH F + + D + +++ +Q+ +D Y++ + YAN+I T +GGTH G K++LT
Sbjct: 243 NKDCLHPQPIFIETLKDSVQVEVCMQY-NDGYAENLFSYANNINTQEGGTHEAGFKSALT 301
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +K D +L+G+ +REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD
Sbjct: 302 RVVNDYARKNNMIKAGDSNLTGDDIREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVD 361
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E L+ +LE +P + + KS+ A +A AA++AR+L R+KS L +SLPGKLADC
Sbjct: 362 SATGEGLSTFLEENPSIARKFIDKSVQAARARDAARKARELTRRKSALEGTSLPGKLADC 421
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P+ E++IVEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE+ + N EI+ +
Sbjct: 422 SWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARLDKILGNTEIRAM 481
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ +DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY K L + +Y+
Sbjct: 482 ITAMGTGIS-DDFDIEKARYHKLIIMTDADVDGAHIRTLLLTFFYRYMKPLIENNFVYIA 540
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV++GK +QY Y + EL KV + + IQR+KGLGEM P QLWETT++P +
Sbjct: 541 QPPLYKVKKGKDIQYVYTEPELTKVLEKIGRDKV-EIQRYKGLGEMNPEQLWETTMDPAK 599
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
R + ++ +EDA +FS LMG +V+ R++ I A ++ NLD
Sbjct: 600 RTILRVTMEDAMRTEEMFSVLMGDKVEPRRDFINRYAKDVRNLD 643
>gi|375006808|ref|YP_004980435.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359285651|gb|AEV17335.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 640
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/650 (52%), Positives = 450/650 (69%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 4 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V + DNSI P+D+H AT + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 234
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKENDTNLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GE+F RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 471 NEVRAIITALGTGI-GEEFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIEH 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ + P +IQR+KGLGEM P QLWET
Sbjct: 530 GYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAELPDQPKPTIQRYKGLGEMNPEQLWET 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA +A+ F LMG +V+ R++ I +NA + NLD
Sbjct: 590 TMNPETRTLLQVSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLD 639
>gi|392423465|ref|YP_006464459.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
gi|391353428|gb|AFM39127.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
Length = 644
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 331/641 (51%), Positives = 449/641 (70%), Gaps = 23/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG I+V +
Sbjct: 15 SYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGVCDQIDVYIH 74
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+HP K +E LTVLHAGGKFGGS S Y VSGGLHGVGLSV
Sbjct: 75 NDNSITVIDNGRGIPVDIHPKMGKPTVEVCLTVLHAGGKFGGSESAYKVSGGLHGVGLSV 134
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L V V + G YHQ+Y++GKP T L L + + + GT+I F PD ++F
Sbjct: 135 VNALSNWLIVEVSKGGHIYHQEYAKGKPTTDL----LDIGTTEGTGTKITFMPDPEIFED 190
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +D++ +A R+REL+FLN + I L+ E SD ++ +F GG++++V +LN K
Sbjct: 191 TV-YDYDILAHRLRELSFLNKSVKINLKDERSDIQET----FFHTGGIQDFVLYLNKTKD 245
Query: 307 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
LH + + DG+ +++ +Q+ +D+Y++ + YAN+I T +GGTH G K++LTR +
Sbjct: 246 CLHPQPIFIETNKDGVQVEVCMQY-NDSYTENLYSYANNINTQEGGTHEAGFKSALTRVI 304
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ +K D +LSG+ +REGLT ++SV+VP+P+FEGQTKT+LGN E+R +VD S
Sbjct: 305 NDYARKNNILKSSDSNLSGDDIREGLTAVVSVKVPDPQFEGQTKTKLGNSEIRGIVDSST 364
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L+ +LE +P V + KSL A +A AA++AR+L R+KS L +SLPGKLADCS
Sbjct: 365 GEGLSTFLEENPTVTRKFIEKSLQAARARDAARKARELTRRKSALEGTSLPGKLADCSWK 424
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P+ E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N EI+ +I A
Sbjct: 425 EPDLCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILANAEIRAMITA 484
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G+ +DF RY+K+II+TDADVDGAHIRTLLLTFFYRY K L + +Y+ PP
Sbjct: 485 MGTGIS-DDFDISKARYNKLIIMTDADVDGAHIRTLLLTFFYRYMKPLLENNYVYIAQPP 543
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KV++G+ +QY Y DAEL K+ + + IQR+KGLGEM P QLWETT++P +R +
Sbjct: 544 LFKVKKGRDIQYAYSDAELNKILDTIGREKV-EIQRYKGLGEMNPEQLWETTMDPAKRTI 602
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ IEDA + +FS LMG +V+ R+E IQ +A ++ NLD
Sbjct: 603 LQVTIEDALRSEDMFSVLMGDKVEPRREFIQRHAKDVRNLD 643
>gi|20090442|ref|NP_616517.1| DNA topoisomerase subunit B [Methanosarcina acetivorans C2A]
gi|19915457|gb|AAM04997.1| DNA topoisomerase (ATP-hydrolyzing), subunit B [Methanosarcina
acetivorans C2A]
Length = 634
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 339/642 (52%), Positives = 446/642 (69%), Gaps = 24/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + +IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ + ++V +
Sbjct: 5 QVYDASRIQVLEGLEAVRKRPSMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTRVDVTI 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IPID HP KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPDGSVTVLDNGRGIPIDPHPVHKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L V V RDG +Y Q+Y RGKP V + + GT+ F PD ++F
Sbjct: 123 VVNALSEWLNVEVERDGKKYFQRYIRGKP----EAEVQETGTSEITGTKTTFKPDARIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T F ++ ++ R+RELAFLN LTI L K+ PE Q + ++GG+ E+V++LN K
Sbjct: 179 TT-DFQYDILSNRLRELAFLNRGLTINL-KDLRSPE-GQAETFIYSGGIVEFVEYLNKKK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+PLH+ + F + D + +++A+Q+ +++Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHEKPIYFERQRDDMVVEIAMQY-TNSYTENVYSFANNINTHEGGTHIIGFKTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N K +K K+ D L+G+ VREGLT IISV++ P+FEGQTKTRLGN EV+ +VD
Sbjct: 295 ANDYIKANKLSKE-DAKLTGDDVREGLTAIISVKLMEPQFEGQTKTRLGNSEVKGIVDSL 353
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L EY E +P V + IL K+L A KA AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 354 VTDGLAEYFEENPKVANVILEKALLAQKAREAAKKARELTRRKSALEVSTLPGKLADCSE 413
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI+IVEG+SAGGSAKQGRDR FQAILPLRGKILNVE+ A + KN E+ +LI
Sbjct: 414 KDPSVCEIYIVEGNSAGGSAKQGRDRGFQAILPLRGKILNVEKSRLAKILKNNEVVSLIT 473
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV EDF E+ RYHK+I++TDADVDGAHIRTLLLT F+RY + L D G +Y+ P
Sbjct: 474 ALGTGV-SEDFALESARYHKVILMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYVYIAQP 532
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++++GK Y + D EL+ K L +IQR+KGLGEM P QLWETT+NPE R
Sbjct: 533 PLYRIKKGKSEYYIHSDRELEVKKKELGEKGL-AIQRYKGLGEMNPEQLWETTMNPESRT 591
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA A+ +F LMG V+ R+ I+ +A +V+LD
Sbjct: 592 LLQVTLEDALRADEIFRVLMGDEVEPRRNFIETHAKEVVDLD 633
>gi|56418540|ref|YP_145858.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|448236315|ref|YP_007400373.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
gi|56378382|dbj|BAD74290.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|445205157|gb|AGE20622.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
Length = 638
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/650 (52%), Positives = 450/650 (69%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 2 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 61
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V + DNSI P+D+H AT + A+E ++TVLHAGGKFGG S LH
Sbjct: 62 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 119
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 120 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 175
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 176 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 232
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 233 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 288
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 289 FKMALTRIINDYARKQQIFKENDTNLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 348
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 349 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 408
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N
Sbjct: 409 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSN 468
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GE+F RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 469 NEVRAIITALGTGI-GEEFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIEH 527
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ + P +IQR+KGLGEM P QLWET
Sbjct: 528 GYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAELPDQPKPTIQRYKGLGEMNPEQLWET 587
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA +A+ F LMG +V+ R++ I +NA + NLD
Sbjct: 588 TMNPETRTLLQVSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLD 637
>gi|261417505|ref|YP_003251187.1| DNA gyrase subunit B [Geobacillus sp. Y412MC61]
gi|261373962|gb|ACX76705.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC61]
Length = 640
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/650 (52%), Positives = 450/650 (69%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 4 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V + DNSI P+D+H AT + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 234
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKENDANLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GE+F RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 471 NEVRAIITALGTGI-GEEFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIEH 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ + P +IQR+KGLGEM P QLWET
Sbjct: 530 GYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAELPDQPKPTIQRYKGLGEMNPEQLWET 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA +A+ F LMG +V+ R++ I +NA + NLD
Sbjct: 590 TMNPETRTLLQVSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLD 639
>gi|297528381|ref|YP_003669656.1| DNA gyrase subunit beta [Geobacillus sp. C56-T3]
gi|319765163|ref|YP_004130664.1| DNA gyrase B subunit [Geobacillus sp. Y412MC52]
gi|297251633|gb|ADI25079.1| DNA gyrase, B subunit [Geobacillus sp. C56-T3]
gi|317110029|gb|ADU92521.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC52]
Length = 638
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/650 (52%), Positives = 450/650 (69%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 2 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 61
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V + DNSI P+D+H AT + A+E ++TVLHAGGKFGG S LH
Sbjct: 62 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 119
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 120 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 175
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 176 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 232
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 233 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 288
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 289 FKMALTRIINDYARKQQIFKENDANLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 348
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 349 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 408
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N
Sbjct: 409 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSN 468
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GE+F RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 469 NEVRAIITALGTGI-GEEFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRELIEH 527
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ + P +IQR+KGLGEM P QLWET
Sbjct: 528 GYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAELPDQPKPTIQRYKGLGEMNPEQLWET 587
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA +A+ F LMG +V+ R++ I +NA + NLD
Sbjct: 588 TMNPETRTLLQVSLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLD 637
>gi|312792288|ref|YP_004025211.1| DNA gyrase subunit B [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179428|gb|ADQ39598.1| DNA gyrase, B subunit [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 637
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 333/650 (51%), Positives = 451/650 (69%), Gaps = 33/650 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 5 NTNSQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 64
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 65 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 122
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + +R GT++ F PD
Sbjct: 123 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGETNRTGTKVTFLPDD 178
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 298
++F T I+FD + I R+RELAFLN + I R++++ P + +Y+ GG+ E+V
Sbjct: 179 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNAKPIELKYD-----GGIAEFV 232
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 KFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTED-FGENIYSFANNIATIDGGTHLIGF 291
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 350
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 476
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 351 RWAVENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y N
Sbjct: 411 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+++ LI+ALG+G+ G D + LRYHKIII+ DADVDG+HIRTLLLTFFYRY + L +
Sbjct: 471 DKLLPLIQALGVGI-GNDIDLKKLRYHKIIIMADADVDGSHIRTLLLTFFYRYMRPLIEN 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+ +GKQV+Y Y++ EL+++ +QRFKGLGEM +LWET
Sbjct: 530 GHIYIAQPPLYKITKGKQVRYAYNEKELQRILQEMKDA---QVQRFKGLGEMNAQELWET 586
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
T++P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 587 TMDPARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLD 636
>gi|312878944|ref|ZP_07738744.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
gi|310782235|gb|EFQ22633.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
Length = 635
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 328/647 (50%), Positives = 444/647 (68%), Gaps = 25/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E P S+ Y ++ IQVLEGLEAVRKRP MYIG GPRGLHHLVYE++DNA+DEA AG
Sbjct: 2 EAPASQ-YTAKDIQVLEGLEAVRKRPGMYIGDQGPRGLHHLVYEVVDNAIDEAMAGVCDT 60
Query: 130 IEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
+ V + + DN IP ++H AT KSA E VLTVLHAG KF Y VSGGLH
Sbjct: 61 VYVTIHPEGSVSVVDNGRGIPTEIHAATGKSAAEVVLTVLHAGAKF--DKKAYQVSGGLH 118
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALSE LEVT+WR+G E+ Q++ RG VT L + DR+GT+++F PD
Sbjct: 119 GVGVSVVNALSEWLEVTIWRNGREHRQRFERGAAVTELQTG----EDTDRRGTKVQFMPD 174
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+++F+T + F T+ GR+RELAFLNP +TI + DP ++ Y F GG+ + ++
Sbjct: 175 EEIFST-LDFSSETLLGRLRELAFLNPGITIHFQDLRQDPILEKH--YHFEGGIASFAEY 231
Query: 301 LNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN K+ L V R + D + +D+ALQ+ +D Y + + +AN I T++GGTH+ G +
Sbjct: 232 LNRGKEVLFKPPVVVRGEKDNVVVDVALQY-NDTYLERVFAFANLINTVEGGTHVSGFRT 290
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N +K K +KDKD + +G+ ++EGLT ++SV++ P+FEGQTKT+LGN +V+
Sbjct: 291 ALTRAVNDQARKEKILKDKDPNFTGDDLKEGLTAVVSVKLLEPQFEGQTKTKLGNGDVKG 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E L LE D+L ++ K++ A +A AAK+ARDLVR+KS + LPGKL
Sbjct: 351 IVDSVVYEGLKALLEERADILKPVVDKAVRARQAREAAKKARDLVRRKSAMSGLDLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ PEE E++IVEG+SAGGSAK GR+R FQAILPLRGKILNVER + NE +
Sbjct: 411 ADCSNRNPEECEVYIVEGESAGGSAKMGRNRSFQAILPLRGKILNVERARLDKILSNEMV 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+ +I+ALG GV G+DF LRYHKI ++ DADVDGAHIRTLLLT F+RY + + G +
Sbjct: 471 RTIIQALGCGV-GDDFDYAKLRYHKIFLMADADVDGAHIRTLLLTLFFRYMPQIIENGHL 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
YV PPLY+V+ GK V YC+ D ELK + ++ S+QR+KGLGEM P QLWETT++
Sbjct: 530 YVAQPPLYRVQEGKTVHYCFSDKELKTLTDK--ASKRVSVQRYKGLGEMNPEQLWETTMD 587
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P R++K++ ++DA A+ +F LMG V+ R+E I+ A V NLD
Sbjct: 588 PANRIIKRVEVDDAVTADELFGILMGDAVEPRREFIETHAKEVRNLD 634
>gi|373457143|ref|ZP_09548910.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
gi|371718807|gb|EHO40578.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
Length = 636
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 338/645 (52%), Positives = 449/645 (69%), Gaps = 25/645 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y ++ IQVL+GLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGYA+ I V
Sbjct: 3 AKEYTAKNIQVLKGLEAVRKRPAMYIGDVTSKGLHHLVYEIVDNSIDEAMAGYATEIMVT 62
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D SI P+DLHP K A+E ++T LHAGGKF ++ Y VSGGLHGVG
Sbjct: 63 IHPDESISVEDNGRGIPVDLHPVEKKPAVEIIMTTLHAGGKFDKNT--YKVSGGLHGVGA 120
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE +V ++R+ Y Q Y RG PVT L + D++GT+I F D ++F
Sbjct: 121 SVVNALSEWCKVEIYRNNKIYQQVYERGAPVTELKI----IGETDKRGTKITFLADSEIF 176
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I + +A R+RELAFLN L I + E +D ++ Y + GGL+E+V +L+
Sbjct: 177 K-KISYKFEVLANRLRELAFLNKNLKITIVDERNDIQET----YQYEGGLKEFVAYLDAS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ PLH+ + F + DGI +++ALQ+ + AY++ +L Y N++ T++GGTH+ G K++LTR
Sbjct: 232 RTPLHEEPIYFEGERDGIPVEIALQYNT-AYTENILTYCNNVNTMEGGTHLSGFKSALTR 290
Query: 364 TLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
T+NS +K +K+ D I+LSGE VREGLT +ISV+VP P+FEGQTKT+LGN EVR V+
Sbjct: 291 TINSYAQKYNFIKNNDKINLSGEDVREGLTAVISVKVPEPQFEGQTKTKLGNSEVRGAVE 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L E+LE +P V I+ K +SA +A AA++AR+L R+K+VL SSSLPGKLADC
Sbjct: 351 TLVNEKLFEFLEQNPAVARPIIEKCISAARAREAARQARELTRRKTVLDSSSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P+ESE+++VEGDSAGGSAKQ RDRRFQAILPL+GKILNVE+ + N+EI+ +
Sbjct: 411 SSNDPKESELYLVEGDSAGGSAKQARDRRFQAILPLKGKILNVEKARLDKILSNDEIKTI 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ + F E RY KIII+TDADVDGAHIRTLLLTFFYRY L +G IY+
Sbjct: 471 ITAIGTGIGSDSFDIEKRRYDKIIIMTDADVDGAHIRTLLLTFFYRYMGELIQQGKIYIA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK++ GKQ Y +DD E ++ +K + IQR+KGLGEM P QLWETT+NPE
Sbjct: 531 QPPLYKIKNGKQEFYAFDDEEKERIIKELGVDESKVVIQRYKGLGEMNPEQLWETTMNPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ I++A EA+ +F+ LMG V RK+ I+ A V NLD
Sbjct: 591 TRTILQVSIDNAMEADQIFTILMGEEVAPRKKFIEENAQFVRNLD 635
>gi|222100717|ref|YP_002535285.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
gi|221573107|gb|ACM23919.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
Length = 636
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 338/650 (52%), Positives = 454/650 (69%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDE+ AGY I+V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDESLAGYCDWIKVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDVHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V+RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVYRDGKIYRQRYERGKPVTLVEV----IGETDKHGTVVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D N+ + F GGL+E+V++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINNEKKTFKFDGGLKEFVKYLNRGKKV 232
Query: 308 LHDVVGFRK--------DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LHDV+ ++ D + +++A Q+ +D+YS+ +L +AN+I+T+DGGTH+ K
Sbjct: 233 LHDVIYLKRTEKVKVKDKEDEVIVEIAFQY-TDSYSEEILSFANTIKTVDGGTHVTAFKT 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N G+K +K+ D S G+ VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGRKHNFLKNGD-SFQGDDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+++++E L + + PD++ +ILSK +S +A AA+RAR++VR+K+VL+S++LPGKL
Sbjct: 351 AVNRAMREELKKIFDASPDLVRTILSKIMSTKQAREAARRAREMVRRKNVLQSTTLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E +E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTDRENTELFIVEGDSAGGSAKQARDRVFQAVLPIRGKILNVEKSSLDRLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF LRY KIII+TDAD+DGAHIRTLLLT FYRY K L ++G I
Sbjct: 471 SDIIVAVGTGI-GDDFDINKLRYGKIIIMTDADIDGAHIRTLLLTLFYRYMKPLIEDGRI 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY++ GK+ Y Y DAEL + + F + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIRVGKEDFYVYSDAELMEYRKMFEGKKM-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|346722695|ref|YP_001178861.2| DNA gyrase subunit B [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|345106666|gb|ABP65670.2| DNA gyrase, B subunit [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 639
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 337/652 (51%), Positives = 451/652 (69%), Gaps = 30/652 (4%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A +NP ++ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+
Sbjct: 4 ATTKNP-NQEYTASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGF 62
Query: 127 ASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
NI+V + DNS IP+D+HP KS +E V TVLHAGGKF + S Y VSG
Sbjct: 63 CKNIDVIIHRDNSVTVLDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NESVYKVSG 120
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
GLHGVG SVVNALS LEV V+RDG Y+QKY RGKPV C + + R GT++ F
Sbjct: 121 GLHGVGASVVNALSRYLEVEVYRDGKVYYQKYERGKPV----CDLKVIGQTQRTGTKVTF 176
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN-EYFFAGGLEE 296
PD ++F T I+FD + + R+RELAFLN + I E EKN E + GG+ E
Sbjct: 177 LPDDEIFET-IEFDADVLLQRLRELAFLNKGIRITFTDER---EKNPKTIELKYDGGIAE 232
Query: 297 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V++LN +K+ LH + + + + I +++A+Q+ +D + + + +AN+I TIDGGTH+
Sbjct: 233 FVKFLNRNKEVLHPEPIYIEGEKNQILVEVAIQY-TDQFGENIYSFANNIATIDGGTHLV 291
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G KA++T+ +N KK VK D L GE +R+G+T ++SV++ P+FEGQTKT+LGN
Sbjct: 292 GFKAAVTKAVNEYAKKYNFVKG-DNQLLGEDIRDGMTAVVSVKIHEPQFEGQTKTKLGNS 350
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSS 474
E R V+ V E L +LE +PDV I+ K+L A KA A++AR+LV ++KS L SS+
Sbjct: 351 EARWAVENLVSEKLAAFLEENPDVSKKIIDKALLAAKAREEARKARELVIKRKSALDSSN 410
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCS PE+ EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ +Y
Sbjct: 411 LPGKLADCSEKDPEKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASPDKIY 470
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+++ LI+ALG G+ G D + LRYHK+I++ DADVDG+HIRTLLLTFFYRY + L
Sbjct: 471 SNDKLLPLIQALGCGI-GNDLDLKKLRYHKVIVMADADVDGSHIRTLLLTFFYRYMRPLI 529
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G IY+ PPLYK+ +GKQV+Y Y+D EL+K+ +QRFKGLGEM +LW
Sbjct: 530 ENGHIYIAQPPLYKITKGKQVRYAYNDKELQKILQEMKDA---QVQRFKGLGEMNAEELW 586
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
ETT++P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 587 ETTMDPARRILLRVELEDAVMAEEIFTILMGEKVEPRREFIEKNAKYVRNLD 638
>gi|304405884|ref|ZP_07387542.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
gi|304345127|gb|EFM10963.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
Length = 636
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 334/641 (52%), Positives = 443/641 (69%), Gaps = 23/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG+ ++I+V +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEVVDNSIDEALAGFCTHIDVIVH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + KS +E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVVDNGRGIPVGENTKLKKSTVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE + VTV RDG Y Q+Y RG P + + + GT ++F PD ++FT
Sbjct: 125 VNALSEHVTVTVKRDGHVYQQEYRRGAPQYDIKV----IGDSEETGTIVQFKPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+++ + RIRELAFLN ++I+L +D Q N Y + GG+ E+V++LN +++
Sbjct: 181 TTVYEYEILQSRIRELAFLNKGISISL----TDERTGQSNIYKYDGGIIEFVKYLNRNRE 236
Query: 307 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
LH+ + + D I +++ALQ+ +D+YSD + +AN+I T +GGTH G K++LTR +
Sbjct: 237 ALHETPIYVEGEKDHIQVEVALQY-NDSYSDNIYSFANNINTHEGGTHESGFKSALTRII 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +++ ++KD D +LSG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NDYARRTNSIKDNDSNLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESFF 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L E+L+ +P V I+ K L A +A AA++AR+L R+KS L SSLPGKLADCSS
Sbjct: 356 AEKLQEFLDENPSVSKRIVEKGLQASRAREAARKARELTRRKSALEVSSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I A
Sbjct: 416 DASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILGNAEIRAIITA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ G+DF RYHKIII+TDADVDGAHIRTLLLTFFYRY + + D G IY+ PP
Sbjct: 476 LGTGI-GDDFDIAKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGFIYIAQPP 534
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KVER K V+Y + E ++ + F ++QR+KGLGEM QLWETT++PE R +
Sbjct: 535 LFKVERNKVVRYAQSEKERDQIIAEFGEGVKVNVQRYKGLGEMNATQLWETTMDPESRTM 594
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ IEDA EA+VVF +LMG V+ R++ I A V NLD
Sbjct: 595 LQVTIEDAMEADVVFDTLMGDNVEPRRDFIHQYAKYVKNLD 635
>gi|374992786|ref|YP_004968285.1| DNA gyrase subunit B [Desulfosporosinus orientis DSM 765]
gi|357211152|gb|AET65770.1| DNA gyrase, B subunit [Desulfosporosinus orientis DSM 765]
Length = 644
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/651 (50%), Positives = 451/651 (69%), Gaps = 24/651 (3%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E +N + Y + QI+VLEGLEAVRKRP MYIGSTGPRGLHHLVYEI+DN++DEA AG
Sbjct: 6 EQLAKNAID-NYNAGQIEVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAG 64
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ + I+V + DNSI P+D+HP K A+E LTVLHAGGKFGGS S Y VS
Sbjct: 65 FCNKIDVTIHLDNSITVLDNGRGIPVDIHPKIGKPAVEVALTVLHAGGKFGGSESAYKVS 124
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVGLSVVNALSE L V V + G Y Q+Y++GKP T L + + + GT+I
Sbjct: 125 GGLHGVGLSVVNALSEWLIVEVSKGGHIYRQEYAKGKPTTEL----MNIGTTKTNGTKIT 180
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F + +D + +A R+REL+FLN +TI L+ E + E+ + AGG+++
Sbjct: 181 FLPDSEIFEIKV-YDFDILAHRLRELSFLNKNITIILKDERTSVEET----FVHAGGIQD 235
Query: 297 YVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V +LN K LH + D + +++ +Q+ +D+Y++ + YAN+I T +GGTH
Sbjct: 236 FVLYLNNSKDCLHSQPIYIETTKDNVQVEVCIQY-NDSYTENLFSYANNINTQEGGTHEA 294
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K++LTR +N +K+ +K D +LSG+ +REGLT +ISV+VP+P+FEGQTKT+LGN
Sbjct: 295 GFKSALTRVINDYARKNNMLKPTDSNLSGDDIREGLTAVISVKVPDPQFEGQTKTKLGNS 354
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
E+R +VD + E L+ +LE +P + + KS+ A +A AA++AR+L R+KS L +SL
Sbjct: 355 EIRGIVDSATGEGLSIFLEENPAIARKFIEKSVQAARARDAARKARELTRRKSALEGTSL 414
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +
Sbjct: 415 PGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILG 474
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N EI+ +I A+G G+ +DF RYHK+II+TDADVDGAHIRTLLLTFFYRY K L +
Sbjct: 475 NAEIRAMITAMGTGIS-DDFDISKARYHKLIIMTDADVDGAHIRTLLLTFFYRYMKPLIE 533
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
IY+ PPL+KV++G+++QY Y D EL KV S + + IQR+KGLGEM P QLWE
Sbjct: 534 NNFIYIAQPPLFKVKKGREIQYAYSDNELTKVLESIGRDKV-EIQRYKGLGEMNPEQLWE 592
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
TT++P +R + ++ +EDA +FS LMG +V+ R++ I A ++ NLD
Sbjct: 593 TTMDPAKRTILRVTMEDAMRTESMFSVLMGDKVEPRRDFINRYAKDVRNLD 643
>gi|319648524|ref|ZP_08002740.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
gi|404487367|ref|YP_006711473.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346363|gb|AAU38997.1| DNA gyrase beta subunit GyrB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389603|gb|EFV70414.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
Length = 637
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/640 (51%), Positives = 444/640 (69%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+
Sbjct: 7 YDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVAIEK 66
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SVV
Sbjct: 67 DNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L+VTV+RDG ++Q++ RG P L + + GT F PD ++FT
Sbjct: 125 NALSTELDVTVYRDGKIHYQEFERGVPKADLKV----IGDTEVTGTTTHFKPDPEIFTET 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++D++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN ++
Sbjct: 181 TEYDYDTLATRVRELAFLTKGVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREV 238
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ V DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N
Sbjct: 239 IHEEPVYIEGSKDGITVEVALQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVIN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++ K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 DYARRNGVFKESDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFS 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 EALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I AL
Sbjct: 418 PTISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITAL 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPL
Sbjct: 478 GTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV++GK+V+Y Y+D +L+++ P N +QR+KGLGEM QLWETT++PE R L
Sbjct: 537 YKVQQGKRVEYAYNDQQLEEILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPETRTLL 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ ++DA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 597 QVTLKDAIDADETFEMLMGDKVEPRRNFIEENARYVKNLD 636
>gi|344995338|ref|YP_004797681.1| DNA gyrase subunit B [Caldicellulosiruptor lactoaceticus 6A]
gi|343963557|gb|AEM72704.1| DNA gyrase, B subunit [Caldicellulosiruptor lactoaceticus 6A]
Length = 637
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 332/650 (51%), Positives = 450/650 (69%), Gaps = 33/650 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 5 NTNSQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 64
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 65 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 122
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + GT++ F PD
Sbjct: 123 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGETNSTGTKVTFLPDD 178
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 298
++F T I+FD + I R+RELAFLN + I R++++ P + +Y+ GG+ E+V
Sbjct: 179 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNAKPIELKYD-----GGIAEFV 232
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 KFLNRNKEVLHQEPIYIEGEKNDILIEVAIQYTED-FGENIYSFANNIATIDGGTHLIGF 291
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 350
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 476
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 351 RWAVENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y N
Sbjct: 411 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+++ LI+ALG+G+ G D + LRYHKIII+ DADVDG+HIRTLLLTFFYRY + L +
Sbjct: 471 DKLLPLIQALGVGI-GNDIDLKKLRYHKIIIMADADVDGSHIRTLLLTFFYRYMRPLIEN 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+ +GKQV+Y Y++ EL+++ +QRFKGLGEM +LWET
Sbjct: 530 GHIYIAQPPLYKITKGKQVRYAYNEKELQRILQEMKDA---QVQRFKGLGEMNAQELWET 586
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
T++P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 587 TMDPARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLD 636
>gi|381210628|ref|ZP_09917699.1| DNA gyrase subunit B [Lentibacillus sp. Grbi]
Length = 641
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/641 (49%), Positives = 441/641 (68%), Gaps = 21/641 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++QIQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AG+ I++ +
Sbjct: 11 QAYGADQIQVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSIDEALAGFCDKIQLVI 70
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+D+ T K ALE ++TVLHAGGKF S+ Y VSGGLHGVG S
Sbjct: 71 EKDNSITVIDNGRGIPVDIQKKTGKPALEVIMTVLHAGGKF--SNDSYKVSGGLHGVGAS 128
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS SL+V V RDG Y+ + +G P + + D GT+ +F PD ++F
Sbjct: 129 VVNALSSSLDVYVHRDGNIYYLGFQKGVPQGKIET----IGETDITGTKTQFKPDPEIFV 184
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +F+ + R+RELAFLN +TI+L + +D E EY + GG+ YV+++N ++
Sbjct: 185 ESTEFNFELLEQRVRELAFLNKGITISLEDKRTDQEPV---EYHYEGGISSYVKYINRNR 241
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ LH+ + D I +++A+Q+ +D ++ + +AN+I T +GG+H G K+ LTR +
Sbjct: 242 EVLHEPFYSETEDDQIMVEVAIQY-NDGFASNIYSFANNIHTYEGGSHESGFKSGLTRAI 300
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ K+ D +LSG+ VREGLT I+S++ P+P+FEGQTKT+LGN EV+KV D +
Sbjct: 301 NDYARKNSMFKENDPNLSGDDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVKKVTDSAF 360
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E +++L +PDV ++ K L A +A LAAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 361 SEAFSKFLFENPDVAKLVVEKGLMASRARLAAKKARELTRRKSALEVSNLPGKLADCSSR 420
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
E++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N+E++ +I A
Sbjct: 421 DASIGELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNKEVRAMITA 480
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PP
Sbjct: 481 LGTGI-GEDFDITKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRPLIEHGYVYIAQPP 539
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYK+++GK Y YDD E++++ + P + +QR+KGLGEM QLWETT++PE R L
Sbjct: 540 LYKIQQGKAAHYAYDDKEMERILNELPKSPKPGLQRYKGLGEMNAEQLWETTMDPETRTL 599
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ + DA +A+ +F LMG +V+ R+ I +NA + NLD
Sbjct: 600 LQVGLSDAMDADNIFDMLMGDKVEPRRNFIEENAQYVQNLD 640
>gi|323342250|ref|ZP_08082482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|336065250|ref|YP_004560108.1| DNA gyrase subunit B [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463362|gb|EFY08556.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|334295196|dbj|BAK31067.1| DNA gyrase, B subunit [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 639
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 320/643 (49%), Positives = 438/643 (68%), Gaps = 20/643 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V +Y S IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN +DEA AG+A+ I V
Sbjct: 6 VDHSYTSSDIQVLEGLEAVRKRPGMYIGTTASRGLHHLVWEIVDNGIDEALAGFATEIIV 65
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DN IP+ +H T S ET+ TVLHAGGKFGG + Y VSGGLHGVG
Sbjct: 66 NVDKDNVISVSDNGRGIPVGIHAKTGVSTAETIFTVLHAGGKFGGGA--YKVSGGLHGVG 123
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV ++ DG+EY+ ++ G V + V D++GT +RF D +
Sbjct: 124 ASVVNALSEWLEVKIYLDGIEYYLRFEEGGKVA---VPLKEVGKTDKKGTTVRFKADPTI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT +F H+ + R+R++AFLN + + + E +PE+ ++ E+ + GL EYVQ++N
Sbjct: 181 FTETTEFSHDVLRDRLRQIAFLNKGIKLVFQDE-REPEETRHLEFVYEDGLREYVQYMNA 239
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K P+H+ +V + +GI +++++Q+ +D ++ + + N+I T +GGTH +G K +LT
Sbjct: 240 NKSPIHEEIVYCEGEEEGILVEVSMQY-NDGFTPNIYSFCNNINTHEGGTHEDGFKLALT 298
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K+ +K D G+ VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V
Sbjct: 299 RVINNYAKEHNLLKKDDDGFLGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVS 358
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L +L HPD I+ K+ A KA +AA++AR+L R+K L SSLPGKLADC
Sbjct: 359 SVFGEQLERFLMEHPDDAKIIVDKAAIASKARVAARKARELTRRKGALEVSSLPGKLADC 418
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ P E EI+IVEGDSAGGSAKQGRD +FQAILPLRGK++NVE+ ++ N EI+ +
Sbjct: 419 SNRNPSECEIYIVEGDSAGGSAKQGRDSKFQAILPLRGKVINVEKARLHKIFDNNEIRMM 478
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G GV E + LRYHKIII+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 ITAFGTGVSDE-MDIDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRFLRPLIENGFVYIA 537
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ RG ++ Y Y++ EL ++K F +++QR+KGLGEM P QLW+TT++PE
Sbjct: 538 QPPLYKISRGNKIAYAYEEEELDELKVEFGDR--FNVQRYKGLGEMNPEQLWDTTMDPET 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R L Q+ I+DA EA+V+F +LMG V R+E IQ A +LD
Sbjct: 596 RTLIQVTIDDAMEADVIFETLMGDEVAPRREFIQANAEYADLD 638
>gi|52078497|ref|YP_077288.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423680393|ref|ZP_17655232.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
gi|52001708|gb|AAU21650.1| DNA gyrase (subunit B) [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441499|gb|EID49208.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
Length = 639
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/640 (51%), Positives = 444/640 (69%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+
Sbjct: 9 YDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVAIEK 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SVV
Sbjct: 69 DNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L+VTV+RDG ++Q++ RG P L + + GT F PD ++FT
Sbjct: 127 NALSTELDVTVYRDGKIHYQEFERGVPKADLKV----IGDTEVTGTTTHFKPDPEIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++D++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN ++
Sbjct: 183 TEYDYDTLATRVRELAFLTKGVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREV 240
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ V DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N
Sbjct: 241 IHEEPVYIEGSKDGITVEVALQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVIN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++ K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 DYARRNGVFKESDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFS 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 EALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I AL
Sbjct: 420 PTISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITAL 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPL
Sbjct: 480 GTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV++GK+V+Y Y+D +L+++ P N +QR+KGLGEM QLWETT++PE R L
Sbjct: 539 YKVQQGKRVEYAYNDQQLEEILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPETRTLL 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ ++DA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 599 QVTLKDAIDADETFEMLMGDKVEPRRNFIEENARYVKNLD 638
>gi|384173667|ref|YP_005555052.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349592891|gb|AEP89078.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 638
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 326/641 (50%), Positives = 440/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+++ + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|255994573|ref|ZP_05427708.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
gi|255993286|gb|EEU03375.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
Length = 651
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 332/657 (50%), Positives = 452/657 (68%), Gaps = 23/657 (3%)
Query: 62 SIATEAFK-ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVD 120
+I E FK + K YG+E+IQVLEGLE VRKRP MYIGSTG GLHHLVYEI+DN++D
Sbjct: 4 NIQRERFKMSEKIDKKYGAEEIQVLEGLEPVRKRPGMYIGSTGKPGLHHLVYEIVDNSID 63
Query: 121 EAQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSS 171
EA AG+ + I++ + D SI P+D+HP A+E + ++LHAGGKF +
Sbjct: 64 EALAGHCNEIKICINEDGSIRVEDNGRGMPVDIHPKQKIPAVEVIHSILHAGGKFD-ENG 122
Query: 172 GYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ 231
GY VSGGLHGVG SVVNALS +EV + R+G Y Q+YSRGK +T L + +
Sbjct: 123 GYKVSGGLHGVGASVVNALSSRMEVKIKRNGNLYKQEYSRGKTMTKLEI----IGTSTET 178
Query: 232 GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA 291
G+ F PD Q+F I+FD++T+ R RE+AFLN L I L ED + + N Y +
Sbjct: 179 GSITEFMPDDQIFDD-IEFDYDTLNYRFREMAFLNKGLKIQL--EDKRKGREKTNTYCYE 235
Query: 292 GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 350
GG++E++++ N +K+ LH D++ F K +D +++A+Q+ +D YS+T+L YAN+I T +G
Sbjct: 236 GGIKEFIKYQNKNKEKLHEDIIFFDKKLDNSQVEVAIQY-TDRYSETLLSYANNINTTEG 294
Query: 351 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 410
G H+ G K++LTR +N KK+K + + D SL GE VREGLT IISV++ NP+FEGQTKT
Sbjct: 295 GYHLSGFKSALTRVINDYAKKAKLIGENDNSLLGEDVREGLTAIISVKLTNPQFEGQTKT 354
Query: 411 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 470
+LGN +R VV+ +V E + +L HP I+ K + + + AAK+ARDL R+K+ L
Sbjct: 355 KLGNSFIRGVVETAVNENVYAFLIEHPKQAKIIIEKCIKSARVREAAKKARDLTRRKTAL 414
Query: 471 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 530
S +LPGKL+DCS P+ SEIF+VEGDSAGGSA+QGRDR QA+LPLRGKILNVE+
Sbjct: 415 DSLALPGKLSDCSEKDPKLSEIFLVEGDSAGGSARQGRDRNRQAVLPLRGKILNVEKARL 474
Query: 531 AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQ 590
+ +EEI+N+I A G G+ G+DF+ + LRYHKIII+TDADVDGAHIRTLLLTFFYRY
Sbjct: 475 DKILSSEEIKNMITAFGCGI-GDDFELDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRYM 533
Query: 591 KTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS-IQRFKGLGEMM 649
L + G +Y PPLYKV++GK+ Y Y + E KK+ + S IQR+KGLGEM
Sbjct: 534 MPLVEAGHVYAAQPPLYKVKKGKKEYYTYSENEQKKLMKNLAEQGGKSDIQRYKGLGEMD 593
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
QLWETT++ ++R L Q+ +EDA+ A+ +F++LMG +V RK+ I +NA + NLD
Sbjct: 594 YNQLWETTMDYDKRTLIQITVEDASAADDIFTTLMGDKVPPRKKFIEENARYVKNLD 650
>gi|19909553|dbj|BAB86972.1| DNA gyrase subunit B [Leptolyngbya boryana IAM M-101]
Length = 546
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 322/555 (58%), Positives = 423/555 (76%), Gaps = 21/555 (3%)
Query: 106 GLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSALETV 156
GLHHLVYE++DN+VDEA AGY I++++ AD S IP +HP T KSALETV
Sbjct: 1 GLHHLVYEVVDNSVDEALAGYCKAIDISINADGSVTVTDDGRGIPTGIHPKTGKSALETV 60
Query: 157 LTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 216
+T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q++ RG +
Sbjct: 61 MTILHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREKKVHLQRFERGIAMG 118
Query: 217 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALR 274
L P + R GT + F PD +FT +FD+ T++GR+RELA+LN ++ A
Sbjct: 119 ELQVEPYP---QARTGTSVTFLPDASIFTETTKFDYTTLSGRLRELAYLNGGVRIKFADH 175
Query: 275 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 333
+E S+ E + YF+ GG+ EY+ ++N +K+PLH+ V F + +GI +++ALQWCSDA
Sbjct: 176 REGSERE----DVYFYEGGIREYISYMNREKQPLHEEVIFVSGERNGIQVEVALQWCSDA 231
Query: 334 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 393
Y+D ++G+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE++REGLT
Sbjct: 232 YNDNIIGFANNIRTVDGGTHLEGLKAVLTRTLNTIARKRNKIKENESNLAGENIREGLTA 291
Query: 394 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 453
+ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P+V D+I+ K++ A KA
Sbjct: 292 VISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPNVSDAIIEKAVQAFKA 351
Query: 454 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 513
A AA+ AR++VR+KSVL SS+LPGKLADC+S P ESEI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 352 AEAARHAREMVRRKSVLESSTLPGKLADCASRDPSESEIYIVEGDSAGGSAKQGRDRRFQ 411
Query: 514 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 573
AILPLRGKILN+E+ D++ +YKN EIQ LI ALGLG+KGE+F LRYH+III+TDADV
Sbjct: 412 AILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDVSQLRYHRIIIMTDADV 471
Query: 574 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 633
DGAHIRTLLLTFFYRYQ+ + D+G +Y+ PPL+KVERG+ YCY + EL++ ++FP
Sbjct: 472 DGAHIRTLLLTFFYRYQRMMVDQGYVYIACPPLFKVERGRNHYYCYSERELQERLATFPD 531
Query: 634 NALYSIQRFKGLGEM 648
NA Y+IQRFKGLGEM
Sbjct: 532 NASYNIQRFKGLGEM 546
>gi|311070653|ref|YP_003975576.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|419820961|ref|ZP_14344565.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
gi|310871170|gb|ADP34645.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|388474872|gb|EIM11591.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
Length = 638
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 330/641 (51%), Positives = 441/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCSEINIEIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVRDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG P+ + + D GT F PD ++FT
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPMADVEV----IGETDTTGTITHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED EK Q NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSSRVRELAFLTKGVKITI--EDKREEKEQKNEYCYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGTKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGIFKESDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L +L +PD ++ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SEALETFLFENPDSARKVIDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYIYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L++V S+ P +QR+KGLGEM QLWETT++P+ R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLEEVLSTLPQTPKPGLQRYKGLGEMNATQLWETTMDPDTRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|15893304|ref|NP_346653.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
gi|337735215|ref|YP_004634662.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
gi|384456724|ref|YP_005669144.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|18273027|sp|P94604.2|GYRB_CLOAB RecName: Full=DNA gyrase subunit B
gi|15022823|gb|AAK77993.1|AE007513_6 DNA gyrase (topoisomerase II) B subunit [Clostridium acetobutylicum
ATCC 824]
gi|325507413|gb|ADZ19049.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|336292832|gb|AEI33966.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
Length = 637
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 332/646 (51%), Positives = 447/646 (69%), Gaps = 28/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN++DEA AGY S+I+V
Sbjct: 5 NEIYDESQIQVLEGLEAVRKRPGMYIGSTGTRGLHHLVYEIVDNSIDEALAGYCSHIKVF 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS+ PI +H K +E ++T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 65 IHKDNSVTVSDDGRGMPIGIHHKMKKPTVEVIMTILHAGGKFGGGA--YRVSGGLHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE+ EV V +G + Q Y RGK + + D GT+I F PD ++F
Sbjct: 123 SVVNALSETCEVEVKTEGHIWKQTYHRGKVASPFE----KIGDSDEHGTKIYFKPDPEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
++D++T++ R+RELAFLN + I L E D NE F + GGL+ +V +LN
Sbjct: 179 EDT-EYDYDTLSQRLRELAFLNKGIKIELTDERHDK-----NEIFHYEGGLKSFVSYLNR 232
Query: 304 DKKPL-HDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+K+ + + + +D ++++ALQ+ +D Y++ + +AN+I TI+GGTH+ G K +L
Sbjct: 233 NKEVVFKEPIYVEGSIDSNYSVEIALQY-NDGYNENIFSFANNIHTIEGGTHLAGFKTAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N KK +K+ D +LSGE +REGLT ++SV++ P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRVINDYAKKFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIV 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D + E ++ YLE +P + ++ K+L A +A AAK+AR++ R+KSVL S+SLPGKLAD
Sbjct: 352 DSIISERVSTYLEENPQIGKLVIDKALVASRAREAAKKAREITRRKSVLESTSLPGKLAD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS EE EI+IVEGDSAGGSAKQGR+RRFQAILPLRGKI+NVE++ + +EEI+
Sbjct: 412 CSSKDAEECEIYIVEGDSAGGSAKQGRNRRFQAILPLRGKIMNVEKQRIDKILNSEEIKA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+ A G G+ G+DF LRYHKIII+TDADVDGAHIRTL+LTFFYRY L EG +++
Sbjct: 472 MATAFGGGI-GKDFDVSKLRYHKIIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV + ++ Y Y D EL+ V + + IQR+KGLGEM P QLWETT+NP
Sbjct: 531 AQPPLYKVTKTRKEYYAYSDKELEDVLQDVGGKDKNTDIQRYKGLGEMNPEQLWETTMNP 590
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
EQR L ++ IEDA A+ +F+ LMG +VD R++ I +NA +VNLD
Sbjct: 591 EQRTLIKVNIEDAMAADEIFTILMGDKVDPRRKFIEENATKVVNLD 636
>gi|217076995|ref|YP_002334711.1| DNA gyrase B subunit [Thermosipho africanus TCF52B]
gi|419759567|ref|ZP_14285861.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
gi|217036848|gb|ACJ75370.1| DNA gyrase, B subunit [Thermosipho africanus TCF52B]
gi|407515387|gb|EKF50145.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
Length = 627
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 330/629 (52%), Positives = 438/629 (69%), Gaps = 26/629 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VL+GLE VR+RP MYIGSTG GLHHLVYEI+DN++DE+ GY I+V +
Sbjct: 3 YSAQNIKVLKGLEPVRQRPGMYIGSTGKAGLHHLVYEIVDNSIDESLQGYCDTIKVTIFK 62
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP T KSALE V+T LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 63 DGSVEVEDNGRGIPVDIHPETGKSALEVVMTTLHAGGKF--SKDSYKVSGGLHGVGASVV 120
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ LEV V RDG Y+Q+Y RG P TC V + +++GT +RF PD +F+T
Sbjct: 121 NALSQWLEVEVHRDGKVYYQRYERGTP----TCEVKIIGETEKRGTTVRFKPDPLIFSTT 176
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
FD +TI R+RELAFLNP +TI + E ++ E+ + + GG++E+V L+ K
Sbjct: 177 -DFDTDTILMRLRELAFLNPNITIYFKDERNNTERT----FHYTGGIKEFVSHLSKGSKS 231
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ V + + I ++++ Q+ +D+ + + + N+IRT+DGGTH+ G K++ TR +N
Sbjct: 232 LHEPVYISGEYEKIKVEVSFQY-TDSDFEKIYSFVNNIRTVDGGTHVTGFKSAFTRVVNE 290
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN-PEFEGQTKTRLGNPEVRKVVDQSVQ 426
LG+K+ +K KD SL G+ VREG+ +ISV + + PEFEGQTK++LGN EV++ V + V+
Sbjct: 291 LGRKTGQLK-KD-SLRGDDVREGMVAVISVLMSSTPEFEGQTKSKLGNEEVQEAVAKVVR 348
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L E+ E + + L I+ K+L A KA AAK AR++V++KSV SSSLPGKLADC +
Sbjct: 349 EKLLEFFETNENTLKIIIQKALEAKKAREAAKHAREMVKRKSVFGSSSLPGKLADCITKK 408
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
EESE+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ + KNE+++++I AL
Sbjct: 409 LEESELFIVEGDSAGGSAKQARDRNFQAILPLRGKILNVEKSSWLKLLKNEQVRDIITAL 468
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G+G+ G+DF + LRY KIII+TDADVDGAHIRTLLLT FYRY K L +EG IY+ PPL
Sbjct: 469 GVGI-GDDFDIKKLRYGKIIIMTDADVDGAHIRTLLLTLFYRYMKELIEEGRIYIAQPPL 527
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ GK Y Y D EL+ K + Y IQR+KGLGEM P QLWETT++P R L
Sbjct: 528 YKLTVGKDHYYFYSDEELEDFKKTLEDKK-YEIQRYKGLGEMNPEQLWETTMDPNTRKLL 586
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI 695
++ IEDA A+ +F LMG+ ++RKE I
Sbjct: 587 KVSIEDAETADELFEMLMGSDTESRKEFI 615
>gi|302870737|ref|YP_003839373.1| DNA gyrase subunit B [Caldicellulosiruptor obsidiansis OB47]
gi|302573596|gb|ADL41387.1| DNA gyrase, B subunit [Caldicellulosiruptor obsidiansis OB47]
Length = 638
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 334/651 (51%), Positives = 451/651 (69%), Gaps = 34/651 (5%)
Query: 71 NPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
NP K Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AGY N
Sbjct: 5 NPGEKQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGYCKN 64
Query: 130 IEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + DNS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLH
Sbjct: 65 IEVIIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLH 122
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALS LEV V+RDG Y+Q+Y +GKPV C + + + D+ GT++ F PD
Sbjct: 123 GVGASVVNALSCYLEVEVYRDGKVYYQRYEKGKPV----CELKVIGTTDKTGTKVTFLPD 178
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEY 297
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+
Sbjct: 179 DEIFET-IEFDGDVILQRLRELAFLNKGIRIVFLDEREKNPKPVELKYD-----GGIAEF 232
Query: 298 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 VKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTDD-FGENIYSFANNIATIDGGTHLIG 291
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 FKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSE 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSL 475
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+L
Sbjct: 351 ARWAVENLVSEKLATFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNL 410
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y
Sbjct: 411 PGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYS 470
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+++ LI+ALG+G+ G D + LRYHK+II+ DADVDG+HIRTLLLTFFYRY + L +
Sbjct: 471 NDKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMADADVDGSHIRTLLLTFFYRYMRPLIE 529
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G IY+ PPLYK+ +GKQV+Y Y++ EL+K+ +QRFKGLGEM +LWE
Sbjct: 530 NGHIYIAQPPLYKITKGKQVRYAYNEKELQKILQEMKDA---QVQRFKGLGEMNAQELWE 586
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
TT++P +R+L ++ +EDA A +F+ LMG +V+ R+E I+ NA + NLD
Sbjct: 587 TTMDPARRILLRVELEDAVMAEEIFTILMGDKVEPRREFIEKNAKYVRNLD 637
>gi|91772465|ref|YP_565157.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
gi|91711480|gb|ABE51407.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
Length = 632
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/644 (51%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AG+ NI+V
Sbjct: 1 MSDDYDATHIQVLEGLEAVRKRPSMYIGSVDTRGLHHLVYEVVDNSIDEALAGFCKNIDV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++ AD S IP+D HP KSALE VLTVLHAGGKF S Y VSGGLHGVG
Sbjct: 61 SINADGSVTVVDDGRGIPVDNHPKYKKSALEVVLTVLHAGGKF--DKSNYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EV V RDG Y+Q+Y RG P + +T + GT+ F PD Q+
Sbjct: 119 VSVVNALSEWMEVEVKRDGKLYYQRYERGAPTSDVTV----IGDAKGTGTKSTFMPDSQI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T +F + T+ R+RELAFLN + I + DS E+ + + + + GG+ +V+ LN
Sbjct: 175 FETT-EFSYGTLITRLRELAFLNKGIRITIT--DSREEELEQDVFEYEGGIISFVEHLNQ 231
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ LH + F ++ +G +++A+Q+ +D+Y + + +AN+I T +GGTH+ G K +LT
Sbjct: 232 SRTALHKTPIYFEREKEGTIVEIAMQY-TDSYGEYVYSFANNINTYEGGTHLIGFKTALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N KK+ VK D L+GE +REGL IISV++ P+FEGQTKT+LGN E++ +VD
Sbjct: 291 RVANDYIKKNNVVKG-DEKLTGEDIREGLAAIISVKLTEPQFEGQTKTKLGNSELKGIVD 349
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L+EY+E +P V I K+L A +A AAK+AR+L R+KS L +LPGKLADC
Sbjct: 350 SMVSEGLSEYMEENPKVAVIIFQKALDARRAREAAKKARELTRRKSALEIGTLPGKLADC 409
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P SE+++VEGDSAGGSAKQGR+RRFQAILP RGKI+NVE+ + + KN E+ +L
Sbjct: 410 SEKDPSVSEVYLVEGDSAGGSAKQGRNRRFQAILPFRGKIINVEKARLSKVLKNNEVLSL 469
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ ED+ E RYHK+II+TDADVDGAHIRTL+LTFF+RY L D G +Y+
Sbjct: 470 ITAMGTGI-AEDYNIEKARYHKVIIMTDADVDGAHIRTLILTFFFRYMAPLIDAGYVYIA 528
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++++GK Y Y D EL N Y +QR+KGLGEM P QLWETT+NP+
Sbjct: 529 QPPLYRIKKGKAEHYVYSDRELAAKLEEIGENNTY-VQRYKGLGEMNPEQLWETTMNPDT 587
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
R L Q+ ++DAA A+ +FS LMG V RK IQ A +VNLD
Sbjct: 588 RTLLQVTMDDAAAADEMFSVLMGDEVAPRKAFIQKYAKEVVNLD 631
>gi|407962968|dbj|BAM56207.1| DNA gyrase subunit B [Bacillus subtilis BEST7003]
Length = 640
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 440/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++F+
Sbjct: 127 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+++ + P +QR+KGLGEM QLWETT++P R L
Sbjct: 539 LYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 599 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 639
>gi|312134087|ref|YP_004001425.1| DNA gyrase subunit B [Caldicellulosiruptor owensensis OL]
gi|311774138|gb|ADQ03625.1| DNA gyrase, B subunit [Caldicellulosiruptor owensensis OL]
Length = 637
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 332/650 (51%), Positives = 449/650 (69%), Gaps = 33/650 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N ++ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 5 NNSTQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 64
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + NS IP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 65 EVVIHKGNSVTVIDDGRGIPVDIHPKLGKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 122
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V+RDG Y+Q+Y RG+P TC + + + D+ GT++ F PD
Sbjct: 123 VGASVVNALSRYLEVEVYRDGKIYYQRYERGRP----TCELKVIGTTDKTGTKVTFLPDD 178
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 298
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+V
Sbjct: 179 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFLDEREKNPKPVELKYD-----GGIAEFV 232
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 KFLNRNKEVLHQEPIYIEGEKNDILIEVAMQYTDD-FGENIYSFANNIATIDGGTHLIGF 291
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K ++T+ +N KK K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 KTAVTKAVNEYAKKYNLTKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 350
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 476
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 351 RWAVENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+QAILPL GK+LNVE+ + +Y N
Sbjct: 411 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+++ LI+ALG+G+ G D + LRYHK+II+ DADVDG+HIRTLLLTFFYRY + L +
Sbjct: 471 DKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMADADVDGSHIRTLLLTFFYRYMRPLIEN 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYK+ +GKQV+Y Y++ EL+K+ +QRFKGLGEM +LWET
Sbjct: 530 GHIYIAQPPLYKITKGKQVRYAYNEKELQKILQEMKDA---QVQRFKGLGEMNAQELWET 586
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
T++P +R+L ++ IEDA A +F+ LMG RV+ R+E I+ NA + NLD
Sbjct: 587 TMDPARRILLRVEIEDAVMAEEIFTILMGDRVEPRREFIEKNAKYVRNLD 636
>gi|430756787|ref|YP_007211252.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430021307|gb|AGA21913.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 643
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 440/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 12 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 72 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++F+
Sbjct: 130 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 186 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 243
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 244 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 302
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 303 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 362
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 363 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 422
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 423 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 482
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 483 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 541
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+++ + P +QR+KGLGEM QLWETT++P R L
Sbjct: 542 LYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 601
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 602 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEVNARYVKNLD 642
>gi|16077074|ref|NP_387887.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221307815|ref|ZP_03589662.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221312137|ref|ZP_03593942.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221317070|ref|ZP_03598364.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. JH642]
gi|221321333|ref|ZP_03602627.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313673|ref|YP_004205960.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|402774249|ref|YP_006628193.1| DNA gyrase subunit B [Bacillus subtilis QB928]
gi|418030644|ref|ZP_12669129.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428277418|ref|YP_005559153.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|449092720|ref|YP_007425211.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452912985|ref|ZP_21961613.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
gi|121887|sp|P05652.1|GYRB_BACSU RecName: Full=DNA gyrase subunit B
gi|40018|emb|CAA26221.1| unnamed protein product [Bacillus subtilis]
gi|467396|dbj|BAA05242.1| B subunit of DNA gyrase [Bacillus subtilis]
gi|2632273|emb|CAB11782.1| DNA gyrase (subunit B) [Bacillus subtilis subsp. subtilis str. 168]
gi|291482375|dbj|BAI83450.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|320019947|gb|ADV94933.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|351471703|gb|EHA31816.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402479435|gb|AFQ55944.1| DNA gyrase (subunit B) [Bacillus subtilis QB928]
gi|407955697|dbj|BAM48937.1| DNA gyrase subunit B [Bacillus subtilis BEST7613]
gi|449026635|gb|AGE61874.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452118013|gb|EME08407.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
Length = 638
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 440/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++F+
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+++ + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|430751860|ref|YP_007214768.1| DNA gyrase subunit B [Thermobacillus composti KWC4]
gi|430735825|gb|AGA59770.1| DNA gyrase, B subunit [Thermobacillus composti KWC4]
Length = 636
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 338/643 (52%), Positives = 440/643 (68%), Gaps = 29/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ IEV +
Sbjct: 8 YDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGFCDYIEVVIRQ 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ HP + LE VLTVLHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 68 DGSVTVIDNGRGIPVGEHPKMKRPTLEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE L V V RDG + Q+Y RG P+ + V D GT I F PD ++FT
Sbjct: 126 NALSEHLCVEVKRDGHIHRQEYKRGVPLYDVRI----VGDTDETGTIITFKPDPEIFTET 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F+++T+ RIRELAFLN + I LR E + + Y + GG+ E+VQ+LN +++P
Sbjct: 182 TEFEYDTLQTRIRELAFLNKGIKIVLRDERTGAS----DTYKYDGGIIEFVQYLNRNREP 237
Query: 308 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
LH+ + G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR
Sbjct: 238 LHEQPIYIEGMR---DNIQVEIALQY-NDSYNENIYSFANNIHTHEGGTHESGFKSALTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +++ +KD D +L+GE VREGLT IISV++P P+FEGQTKT+LGN E R +V+
Sbjct: 294 IINDYARRAGLLKDSDSNLTGEDVREGLTAIISVKIPEPQFEGQTKTKLGNSEARSIVES 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E L E+L+ +P V I+ K + A +A AA++AR+L R+K+ L S+LPGKLADCS
Sbjct: 354 MFAEKLQEFLDENPSVSRRIVEKGVQAARAREAARKARELTRRKNALEVSALPGKLADCS 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 414 SRDASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILANSEIRAII 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + + + G +Y+
Sbjct: 474 TALGTGI-GEDFDLSKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYVYIAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ER K V+Y +D E ++ + F A +IQR+KGLGEM QLWETT++PE R
Sbjct: 533 PPLYKIERNKVVRYALNDKERDEILAEFGEGAKVNIQRYKGLGEMDAEQLWETTMDPESR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ Q+ I+DA A+ +F +LMG V+ R+E IQ A V NLD
Sbjct: 593 TMLQVTIQDAIAADAIFDTLMGDDVEPRREFIQAHAKFVKNLD 635
>gi|217967929|ref|YP_002353435.1| DNA gyrase subunit B [Dictyoglomus turgidum DSM 6724]
gi|217337028|gb|ACK42821.1| DNA gyrase, B subunit [Dictyoglomus turgidum DSM 6724]
Length = 635
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 338/642 (52%), Positives = 458/642 (71%), Gaps = 29/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
Y ++ IQ+LEG EAVR+RP MYIG TG RGLHHL++E++DN++DE AGY + I V L
Sbjct: 9 YTADSIQILEGTEAVRRRPGMYIGDTGIRGLHHLIFELVDNSIDEVMAGYCNYILVELKK 68
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ADN IP+D+HP K ALE VLT LHAGGKF S+S Y +SGGLHGVGLSVV
Sbjct: 69 DGSVVVADNGRGIPVDIHPQAKKPALEVVLTTLHAGGKF--SNSIYKISGGLHGVGLSVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++Q Y +GKPV LT D GT+IRF+PD ++F T
Sbjct: 127 NALSSKLEVEVMRDGKIFYQGYEKGKPVMPLTVR----GETDETGTKIRFYPDSEIFETT 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD++ +A R+RELAFLNP +TI LR E + + N + + GGL E++++L+ K+
Sbjct: 183 -KFDYDIVANRLRELAFLNPNVTIELRDERT----GKSNVFKYEGGLLEFIEYLSKGKEI 237
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + R++ + + +++ +Q+ S Y + +L YAN+I TI+GGTH+ G + +LTR +N+
Sbjct: 238 LHEPIYMRREEENLIVEIVMQYNS-GYDELILSYANNIHTIEGGTHVTGFRTALTRVVNN 296
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
+ K+ + SLSG+ VREGLT I+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E
Sbjct: 297 FARNWGLWKENE-SLSGDDVREGLTAIVSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEE 355
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
LTEY +P+V I+SK + A +A AA++AR+LVR+KS+L SS LPGKLADCS P
Sbjct: 356 ELTEYFSENPEVGKLIISKIIEAYRARQAARKARELVRRKSLLESSLLPGKLADCSERDP 415
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE-AAMYKNEEIQNLIRAL 546
E+ E+FIVEG+SAGGSAKQ RDRR+QAILPLRGKILNVE+ + +EEI+ +I +L
Sbjct: 416 EKCELFIVEGESAGGSAKQARDRRYQAILPLRGKILNVEKAQHLTKILSSEEIKAIIASL 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+DF LRYHKIII+TDADVDGAHIRTLLLTFFYR+ + L + G IY+ PPL
Sbjct: 476 GTGI-GQDFDLSKLRYHKIIIMTDADVDGAHIRTLLLTFFYRHFRPLIEGGYIYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAELKKV--KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
Y +++GK+ +Y Y + E +++ + +P N IQR+KGLGEM P QL ETT++P++R+
Sbjct: 535 YLLKKGKEERYAYSEEEKEEILREWGYPDNVY--IQRYKGLGEMDPEQLRETTMDPQKRI 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ IEDA EA +FS LMG V+ R+ I+ A V NLD
Sbjct: 593 LLQVTIEDALEAERLFSILMGNNVEERRSFIEQKAKFVRNLD 634
>gi|239825589|ref|YP_002948213.1| DNA gyrase subunit B [Geobacillus sp. WCH70]
gi|239805882|gb|ACS22947.1| DNA gyrase, B subunit [Geobacillus sp. WCH70]
Length = 640
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/650 (52%), Positives = 448/650 (68%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E + TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQKIEHTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V + DN IP+D+ + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 INVTIEKDNIIAITDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V RDG ++QKY RG P T L + DR GT +RF PD
Sbjct: 122 GVGASVVNALSEELEVYVHRDGKIHYQKYQRGVPCTDLEV----IGETDRTGTTVRFKPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L ED E N+ NEY + GG++ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITL--EDKRVE-NRKNEYHYEGGIKSYVKH 234
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ ++G R DGI +++ALQ+ +D+YS + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIIGER---DGIYVEIALQY-NDSYSSNIYSFVNNIHTHEGGTHESG 290
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + +KD D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 291 FKTALTRIINDYARKHQILKDNDPNLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARAVTDAIFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N
Sbjct: 411 GKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + +
Sbjct: 471 NEVRAIITALGTGI-GEDFDITKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMREFIER 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ PPLYK+E+GKQV+Y Y+D +L+K+ + P N +IQR+KGLGEM P QLWET
Sbjct: 530 GYVYIAQPPLYKIEQGKQVKYAYNDRQLEKILAELPENPKPTIQRYKGLGEMNPEQLWET 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA EA+ F LMG +V+ R++ I +NA + NLD
Sbjct: 590 TMNPETRTLLQVSLQDAIEADETFEILMGDKVEPRRQFIEENARYVKNLD 639
>gi|1790875|gb|AAB41130.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
Length = 637
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/646 (51%), Positives = 447/646 (69%), Gaps = 28/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIG+TG RGLHHLVYEI+DN++DEA AGY S+I+V
Sbjct: 5 NEIYDESQIQVLEGLEAVRKRPGMYIGTTGTRGLHHLVYEIVDNSIDEALAGYCSHIKVF 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS+ PI +H K +E ++T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 65 IHKDNSVTVSDDGRGMPIGIHHKMKKPTVEVIMTILHAGGKFGGGA--YRVSGGLHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE+ EV V +G + Q Y RGK + + D GT+I F PD ++F
Sbjct: 123 SVVNALSETCEVEVKTEGHIWKQTYHRGKVASPFE----KIGDSDEHGTKIYFKPDPEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
++D++T++ R+RELAFLN + I L E D NE F + GGL+ +V +LN
Sbjct: 179 EDT-EYDYDTLSQRLRELAFLNKGIKIELTDERHDK-----NEIFHYEGGLKSFVSYLNR 232
Query: 304 DKKPL-HDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+K+ + + + +D ++++ALQ+ +D Y++ + +AN+I TI+GGTH+ G K +L
Sbjct: 233 NKEVVFKEPIYVEGSIDSNYSVEIALQY-NDGYNENIFSFANNIHTIEGGTHLAGFKTAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N KK +K+ D +LSGE +REGLT ++SV++ P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRVINDYAKKFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIV 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D + E ++ YLE +P + ++ K+L A +A AAK+AR++ R+KSVL S+SLPGKLAD
Sbjct: 352 DSIISERVSTYLEENPQIGKLVIDKALVASRAREAAKKAREITRRKSVLESTSLPGKLAD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS EE EI+IVEGDSAGGSAKQGR+RRFQAILPLRGKI+NVE++ + +EEI+
Sbjct: 412 CSSKDAEECEIYIVEGDSAGGSAKQGRNRRFQAILPLRGKIMNVEKQRIDKILNSEEIKA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+ A G G+ G+DF LRYHKIII+TDADVDGAHIRTL+LTFFYRY L EG +++
Sbjct: 472 MATAFGGGI-GKDFDVSKLRYHKIIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV + ++ Y Y D EL+ V + + IQR+KGLGEM P QLWETT+NP
Sbjct: 531 AQPPLYKVTKTRKEYYAYSDKELEDVLQDVGGKDKNTDIQRYKGLGEMNPEQLWETTMNP 590
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
EQR L ++ IEDA A+ +F+ LMG +VD R++ I +NA +VNLD
Sbjct: 591 EQRTLIKVNIEDAMAADEIFTILMGDKVDPRRKFIEENATKVVNLD 636
>gi|403382763|ref|ZP_10924820.1| DNA gyrase subunit B [Paenibacillus sp. JC66]
Length = 636
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 334/643 (51%), Positives = 441/643 (68%), Gaps = 23/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG+ I+V
Sbjct: 5 SHTYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEVVDNSIDEALAGFCDRIDVI 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ ++ KS LE V+TVLHAGGKFGG GY VSGGLHGVG+
Sbjct: 65 IHKDNSITVIDNGRGIPVGMNTKLQKSTLEVVMTVLHAGGKFGGE--GYKVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE + V V RDG Y Q+Y RG P V V +R GT+ F PD ++F
Sbjct: 123 SVVNALSEHVIVQVSRDGKIYQQEYRRGIP----QYDVKVVGDTERTGTKTTFLPDPEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++++ + RIRELAFLN + I + E +D EKN + + GG++ +V++LN
Sbjct: 179 KETTVYEYDILQSRIRELAFLNKGIEINILDERTD-EKNSFK---YDGGIKSFVEYLNEK 234
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ LHD + + D I +++ALQ+ +D++++ + +AN+I T +GGTH G K++LTR
Sbjct: 235 REVLHDEPIYTEGTKDNIQVEIALQY-NDSFTENIYSFANNINTHEGGTHESGFKSALTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN +KS ++KD D +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 294 ILNDYARKSNSIKDSDANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVES 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E L E+LE HP V I+ K + A +A AA++AR+L R+K+ L SSLPGKLADCS
Sbjct: 354 LFSEKLQEFLEEHPSVSRKIMEKGIQAARAREAARKARELTRRKNALEVSSLPGKLADCS 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 414 SKDASISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNAEIRAII 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + L + G +Y+
Sbjct: 474 TALGTGI-GADFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ER K V+Y Y++ + +++ F ++QR+KGLGEM QLWETT++PE R
Sbjct: 533 PPLYKLERNKIVRYAYNEKQREEITKEFGEGTKINVQRYKGLGEMNASQLWETTMDPESR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ I+DA EA+ VF +LMG V+ R++ IQ A V NLD
Sbjct: 593 TFLQVTIQDAIEADRVFDTLMGDNVEPRRDFIQEHAKYVTNLD 635
>gi|386756586|ref|YP_006229802.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
gi|384929868|gb|AFI26546.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
Length = 638
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 438/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCKDINIQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+ + + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKELEDLLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|167629176|ref|YP_001679675.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
gi|167591916|gb|ABZ83664.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
Length = 641
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/643 (51%), Positives = 451/643 (70%), Gaps = 25/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y + QIQVLEGLEAVR+RP MYIGST RGLHHLVYEI+DN++DEA AGY + I+V
Sbjct: 12 ASSYDASQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCNRIDVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+HP K A+E LTVLHAGGKFGG GY VSGGLHGVGL
Sbjct: 72 IHDDNSIEVIDNGRGIPVDIHPKMGKPAVEVALTVLHAGGKFGGE--GYKVSGGLHGVGL 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L VTV R+G + Q Y RG + L V GT I F PD Q+F
Sbjct: 130 SVVNALSEKLRVTVRRNGKIHEQHYERGVATSELRV----VGQSKETGTTIYFKPDPQIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+++ ++T++ R+REL+FLN + I L +D Q + + +GG+ ++V++LN +
Sbjct: 186 D-ELEYSYDTLSHRLRELSFLNRGVRITL----TDKRSGQESVFAHSGGIVDFVKFLNRN 240
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K +H+ V+ F+ + DG+ +++ALQ+ +D Y + + YAN+I T +GGTH G K +LTR
Sbjct: 241 KDVIHNEVIYFQTEKDGVHVEVALQY-NDGYVENLFSYANNINTQEGGTHEAGFKTALTR 299
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N ++ +KD + +LSGE +REG+T +ISV+V P+FEGQTKT+LGN EVR ++D
Sbjct: 300 VVNEYARRLNQLKDNENNLSGEDIREGITAVISVKVREPQFEGQTKTKLGNSEVRGIIDS 359
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E + YLE HP + I+ K++ A++A AA++AR+L R+K+ L S+SLPGKLADCS
Sbjct: 360 CVTEGVGTYLEEHPSIAKRIIEKAIGAMRAREAARKARELTRRKTALESTSLPGKLADCS 419
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 420 FKDPSLCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKSRLDKVLSNEEIRAII 479
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ GEDF RYH+I ++TDADVDG+HIRTLLLTFFYR+ K L + G +Y+
Sbjct: 480 TAMGTGI-GEDFDLSKARYHRICLMTDADVDGSHIRTLLLTFFYRHMKPLIENGYVYIAQ 538
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V++ + V+Y Y D EL + + + +IQR+KGLGEM P QLWETT++P+ R
Sbjct: 539 PPLYQVKKNRDVRYFYHDNELNRYLEKTGRDGV-TIQRYKGLGEMNPEQLWETTMDPKNR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDAAEA ++F++LMG RV+ R++ IQ +A ++ NLD
Sbjct: 598 TILQVSLEDAAEAELIFTTLMGDRVEPRRDFIQSHAKDVRNLD 640
>gi|70725006|ref|YP_251920.1| DNA gyrase subunit B [Staphylococcus haemolyticus JCSC1435]
gi|68445730|dbj|BAE03314.1| DNA gyrase (topoisomerase II) subunit B [Staphylococcus
haemolyticus JCSC1435]
Length = 644
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 438/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 129 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGISITLRDEREDVEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ + + D + I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHEEPIYIHQTKDDVEIEIAMQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 303 ILNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L HP+V ++ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFAEHFERFLYEHPNVARIVVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKKPEESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+KS + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLAQGKQKYYVFNDRELDKLKSELSPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|452991700|emb|CCQ96924.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 636
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 452/642 (70%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y +E+IQVL GLE VRKRP MYIGSTG RGLHHLVYE++DN++DEA AG I++ +
Sbjct: 8 RIYTAEEIQVLTGLEPVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGVCDTIKIVI 67
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+++HP T KS +ETVLT+LHAGGKF ++S Y VSGGLHGVG+S
Sbjct: 68 EKDNSILVEDNGSGIPVEIHPQTGKSTVETVLTILHAGGKF--NNSAYKVSGGLHGVGVS 125
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L V RDG EY QK+ RG PV+ L V GT I F PDK++F
Sbjct: 126 VVNALSEWLIAKVKRDGKEYMQKFERGVPVSELQI----VGEAKTTGTLINFKPDKEIFD 181
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ F+ T+ R+RE+AFLN + I L D N ++ + GG++ +V+++N +K
Sbjct: 182 -EVDFNFETLEYRLREMAFLNKGIMIKL----EDRRTNTNRKFHYEGGIKSFVEYINRNK 236
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
P+H D++ F + D I ++LA+Q+ +DAYS+ + +AN+I T +GGTH+ G++ +LTR
Sbjct: 237 NPIHKDIMYFEAEKDNIVVELAMQY-TDAYSENIYTFANNINTQEGGTHLSGLRTALTRA 295
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K +K+KD +L G+ VREGL+ ++SV++ P+FEGQTKT+LGN EVR +V+
Sbjct: 296 INDYGRKYNYIKEKDENLQGDDVREGLSAVLSVKLMEPQFEGQTKTKLGNSEVRGIVESL 355
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+++T YLE +P +L K++SA +A AA++AR++ R++S+L +++LPGKLADC S
Sbjct: 356 TYDFITRYLEENPKSGKIVLEKAVSASRAREAARKAREISRKRSILDNTTLPGKLADCQS 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
E +EI+IVEGDSAGGSAKQGRDR +QAILPLRGKILNVE+ + EEI+ +I
Sbjct: 416 NDLEITEIYIVEGDSAGGSAKQGRDRGYQAILPLRGKILNVEKARLDRILGYEEIRAMIT 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F E LRY KIII+TDADVDGAHIRTLLLTFF+RY + L D G +Y+ P
Sbjct: 476 AFGTGI-GDEFDIEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRELLDNGHVYIAQP 534
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV +G+ Y Y D EL+K+ + YSIQR+KGLGEM P QLWETT++PE+R+
Sbjct: 535 PLYKVSKGRAEHYVYSDNELEKLLEEI-GRSNYSIQRYKGLGEMNPEQLWETTMDPEKRI 593
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ +ED A+ +F++LMG +V R+E IQ A LV NLD
Sbjct: 594 LLQVTVEDGLVADEIFTTLMGDKVKPRREFIQKNAKLVKNLD 635
>gi|150020566|ref|YP_001305920.1| DNA gyrase subunit B [Thermosipho melanesiensis BI429]
gi|149793087|gb|ABR30535.1| DNA gyrase, B subunit [Thermosipho melanesiensis BI429]
Length = 627
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 337/629 (53%), Positives = 437/629 (69%), Gaps = 26/629 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VL+GLE VR+RP MYIGSTG GLHHLVYEI+DN+VDEA GY I V +
Sbjct: 3 YNAQNIKVLKGLEPVRQRPGMYIGSTGKAGLHHLVYEIVDNSVDEALQGYCDKIYVTIFK 62
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP T KSALE V+T LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 63 DGSVEIKDNGRGIPVDIHPETGKSALEVVMTTLHAGGKF--SKDSYKVSGGLHGVGASVV 120
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y+QKY RG P+T V + D +GT +RF PD ++F+T
Sbjct: 121 NALSEWLEVEVHRDGKIYYQKYQRGTPLT----EVRIIGETDYRGTIVRFKPDTEIFST- 175
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++FD +TI R+RELAFLNP +T+ + E + EK + F GGL+E+V L+ +
Sbjct: 176 VEFDSDTILIRLRELAFLNPNITVVFKDERENIEKT----FHFTGGLKEFVVHLSKGTRS 231
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + + + I +D+ Q+ + + + + + N+IRT+DGGTH+ G K + TR +N
Sbjct: 232 LHEPILVSGEYNSIKVDVCFQYTASDF-EKIYSFVNNIRTVDGGTHVTGFKTAFTRVVNE 290
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVP-NPEFEGQTKTRLGNPEVRKVVDQSVQ 426
LGKK+ +K KD +L GE +REG+ I+SV + PEFEGQTK++LGN EV++ V + V+
Sbjct: 291 LGKKTGQLK-KD-TLRGEDIREGIVAIVSVLMSKTPEFEGQTKSKLGNEEVQEAVAKVVR 348
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L EY E + + L I+ K+L A KA AAK AR+++++KSV SSSLPGKLADC +
Sbjct: 349 EKLLEYFESNENTLKIIIQKALEAKKAREAAKHAREMIKRKSVFGSSSLPGKLADCITKK 408
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
EESE+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ + KNE+I+++I AL
Sbjct: 409 MEESELFIVEGDSAGGSAKQARDRNFQAILPLRGKILNVEKSSWLKLLKNEQIRDIITAL 468
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+DF LRY KIII+TDADVDGAHIRTLLLT FYRY K L DEG IY+ PPL
Sbjct: 469 GTGI-GDDFDISKLRYGKIIIMTDADVDGAHIRTLLLTLFYRYMKELIDEGRIYIAQPPL 527
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV K++ Y Y D EL++ K + + IQR+KGLGEM P QLWETT++PE+R L
Sbjct: 528 YKVNVNKKIYYFYSDEELEEFKENLKDKK-FEIQRYKGLGEMNPQQLWETTMDPEKRKLL 586
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI 695
++ IEDA EA+ +F LMG+ ++RKE I
Sbjct: 587 KVEIEDAEEADELFEMLMGSDTESRKEFI 615
>gi|435853738|ref|YP_007315057.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433670149|gb|AGB40964.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 636
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 324/645 (50%), Positives = 443/645 (68%), Gaps = 24/645 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V K Y +EQIQVLEGLEAVRKRP MYIGSTG +GLHHL++E++DN++DE AGY IE+
Sbjct: 3 VDKKYNAEQIQVLEGLEAVRKRPGMYIGSTGTKGLHHLIWEVVDNSIDEFLAGYGDKIEI 62
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L +D IP+D+HP A + VLT LHAGGKF GS GY VSGGLHGVG
Sbjct: 63 TLQSDQVVKVRDYGRGIPVDIHPKKGLPAAQLVLTTLHAGGKFDGS--GYKVSGGLHGVG 120
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE L++ ++R+G YHQKY RG PVT + + GT I F PD ++
Sbjct: 121 VSVVNALSEWLKIKIYRNGAVYHQKYERGYPVTEFEKQ----GTTSKTGTEIAFKPDAEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T ++F +T+ R++E AFLN L + L+ D EK++ +Y + GGLE +++ LN
Sbjct: 177 FDT-LEFKFDTLKNRLQESAFLNKNLNLILK--DRRKEKDKEVKYCYDGGLEAFIKHLNK 233
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K PL D+V ++VD +++A Q+ + Y++ + +AN+I T DGG H+ G K ++T
Sbjct: 234 SKTPLVDDIVYVEREVDDTYVEIAFQY-NKGYNERIYSFANNINTHDGGYHLTGFKTAIT 292
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+ LN ++ + D L+G +REGLT +ISV++ +P+FEGQTKT+LGN E+R V
Sbjct: 293 KALNKYAEEKNVLNKTDPKLTGRDLREGLTAVISVKLTDPQFEGQTKTKLGNSEIRTTVQ 352
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ-KSVLRSSSLPGKLAD 481
V +YL YLE +P + ++++K+L A++A A+K+AR+L R+ K L S+SLPGKLAD
Sbjct: 353 HVVSDYLPSYLERNPKLAKAVINKALEAVRARKASKKARELARKRKGPLSSNSLPGKLAD 412
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS TPEE E+++VEGDSAGGSAKQGR+R FQA+LPL+GKI+NVER + KN+EI +
Sbjct: 413 CSSRTPEECELYLVEGDSAGGSAKQGRNRNFQAVLPLKGKIMNVERSRLNKILKNKEIAS 472
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
++ ALG G+ GE+F + LRYHKIII+TDADVDGAHI TLLLT FYRY L + IY+
Sbjct: 473 IVTALGAGI-GEEFNLDKLRYHKIIIMTDADVDGAHICTLLLTLFYRYMPQLIENSHIYI 531
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY+V G+Q +Y Y D ELK+ N + SIQR+KGLGEM P QLW TT++PE
Sbjct: 532 AQPPLYQVTYGRQKKYLYTDQELKEYLKDKNRNRI-SIQRYKGLGEMNPGQLWTTTMDPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L+++ ++D A+ VF SLMG++ R+E I N A+L N+D
Sbjct: 591 HRKLQKVEVDDEIIADDVFHSLMGSKASLRREFIMNNADLASNID 635
>gi|350264106|ref|YP_004875413.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349596993|gb|AEP84781.1| DNA gyrase, B subunit [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 638
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 438/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L VTV RDG + Q Y RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELVVTVHRDGKIHRQTYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+ + + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKELEDLLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|116754690|ref|YP_843808.1| DNA gyrase, B subunit [Methanosaeta thermophila PT]
gi|116666141|gb|ABK15168.1| DNA gyrase subunit B [Methanosaeta thermophila PT]
Length = 628
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/640 (50%), Positives = 445/640 (69%), Gaps = 29/640 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+V+EGLEAVR RP+MYIGST GLHHLVYE++DN+VDEA AGY I V +
Sbjct: 6 YDASHIKVMEGLEAVRHRPSMYIGSTDVHGLHHLVYEVVDNSVDEAMAGYCKEISVVIHG 65
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP N+ A+E V+TVLHAGGKF + Y VSGGLHGVG+SVV
Sbjct: 66 DGSVSVKDDGRGIPVDIHPQYNRPAVEIVMTVLHAGGKFDHDT--YHVSGGLHGVGVSVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V R+G Y Q+Y RG+PV+ L + GT +RF PD ++F
Sbjct: 124 NALSEWLEVEVSREGRVYRQRYERGRPVSDLQ----ETGVSENTGTTVRFKPDPEIFEVT 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F + ++ R+RELAFLN L I++ E S K + + GG+ +VQ+LN K+
Sbjct: 180 -DFSFDVLSSRLRELAFLNRGLKISITDERSGRSKT----FHYDGGIISFVQYLNKSKEV 234
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH + + F + D +++++A+Q+ + +Y++++ +AN+I T +GGTH+ G +A+LT+T+N
Sbjct: 235 LHPNPIYFSRVRDDVSVEVAMQYNT-SYNESVFTFANNINTREGGTHLSGFRAALTKTVN 293
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ K +K D L+G+ +REGL ++SVR+P+P+FEGQTKTRLGN VR +V+ V
Sbjct: 294 DFVREKKLLKG-DAKLTGDDLREGLVAVVSVRLPDPQFEGQTKTRLGNSAVRGLVESLVS 352
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L EY EL+P V ++I+ K+ A++A AA++A+++ R+K+ L SS LPGKLADC
Sbjct: 353 EGLMEYFELNPQVAEAIVEKATEAMRAREAARKAKEITRRKTALTSSGLPGKLADCVERD 412
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P +SE++IVEG+SAGGSAKQGR+R FQA+LPLRGKILNVER M KNEEI+NLI AL
Sbjct: 413 PAKSELYIVEGESAGGSAKQGRNRHFQAVLPLRGKILNVERARLDKMLKNEEIRNLITAL 472
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+DF RYHKIII+TDADVDG+HIRTLLLTFFYRY + L + G +Y+ PPL
Sbjct: 473 GTGI-GDDFDITKARYHKIIIMTDADVDGSHIRTLLLTFFYRYMQPLIEAGYVYIAQPPL 531
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V +GK V+Y Y D EL K+ + +QR+KGLGEM P QLWETT+NPE+R L
Sbjct: 532 YQVRKGKSVKYAYSDEELAKLL----EDGKAVVQRYKGLGEMNPEQLWETTMNPEKRTLL 587
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ ++DA EA+ +FS LMG +V+ R+ I+ A V NLD
Sbjct: 588 RVTLKDAVEADEIFSVLMGEQVEPRRVFIETHAREVRNLD 627
>gi|383320651|ref|YP_005381492.1| DNA gyrase subunit B [Methanocella conradii HZ254]
gi|379322021|gb|AFD00974.1| DNA gyrase subunit B [Methanocella conradii HZ254]
Length = 635
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 445/642 (69%), Gaps = 26/642 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AGY NIEV++
Sbjct: 8 QAYDASSIQVLEGLEAVRKRPSMYIGSTDERGLHHLVYEVVDNSIDEALAGYCKNIEVSI 67
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+++H ++ ALE V+T+LHAGGKF + Y VSGGLHGVG+S
Sbjct: 68 NNDGSVTVNDDGRGIPVEMHEKYHRPALEIVMTMLHAGGKFDNRT--YKVSGGLHGVGVS 125
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE ++V V R+G Y Q Y RGKP T V + + GTR+ F PD +F
Sbjct: 126 VVNALSEWMKVEVRRNGRLYVQDYVRGKP----TDEVHEIGTAIGTGTRVTFKPDPTIFE 181
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T +F ++ +A R+RELAFLN + I +D + + GG+ ++V +LN K
Sbjct: 182 TT-EFKYDILANRLRELAFLNKGIKITF----TDARSGVSEVFHYEGGIVQFVHYLNEGK 236
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
PLHD V+ F K D +++A+Q+ +D Y++ +L +AN+I T +GGTH+ G +++LTR+
Sbjct: 237 TPLHDKVIYFEKQKDTTNVEIAMQY-NDGYNEIVLAFANNINTTEGGTHLSGFRSALTRS 295
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N KK+ +K D+ LSG+ VREGLT IISV++ NP+FEGQTKT+LGN EV+ +V+
Sbjct: 296 FNDYAKKNNLLKG-DMVLSGDDVREGLTAIISVKLTNPQFEGQTKTKLGNSEVQGIVNSL 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +YLE +P I+ K++ A A AA++AR+L R+KS L SS+LPGKLADCS
Sbjct: 355 VGEGLDDYLEENPADARKIIEKAIQAFHAREAARKARELTRRKSALESSTLPGKLADCSE 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE+ E+++VEGDSAGGSAKQGR+R +QAILPLRGKILNVE+ + ++EEI+ LI
Sbjct: 415 KDPEKCELYLVEGDSAGGSAKQGRNRMYQAILPLRGKILNVEKARLSKALQSEEIKALIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG V G++F RYHKII++TDADVDGAHIRTLLLTFFYRY K L + G +Y+ P
Sbjct: 475 ALGTSV-GDEFDISKARYHKIILMTDADVDGAHIRTLLLTFFYRYMKPLVEAGYVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK+ +Y Y + EL + Y+IQR+KGLGEM P QLW TT++PE R
Sbjct: 534 PLFKIKKGKEERYVYSEKELNAALDEM-GRSNYTIQRYKGLGEMNPEQLWSTTMDPETRT 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDAAEA+ +FS LMG +V+ RK I+ A LV NLD
Sbjct: 593 VLKVTLEDAAEADHIFSVLMGDKVEPRKAFIEKNAKLVRNLD 634
>gi|405984209|ref|ZP_11042512.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
gi|404388041|gb|EJZ83125.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
Length = 649
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 337/650 (51%), Positives = 435/650 (66%), Gaps = 26/650 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V +
Sbjct: 9 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGFCTKIDVTIHE 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI PID HP +E VLT+LHAGGKFGG GY VSGGLHGVG+S V
Sbjct: 69 DNSITVVDNGRGIPIDEHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSCV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG Y + RGK V L + + GT+ FWPD +VFT
Sbjct: 127 NALSTRLEVEVKRDGGLYFIAFERGKTVEKLR----RIGDAEGTGTKTTFWPDPEVFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+ +D++T+A R RE+AFLN L I L E D D +E F FAGG+ ++V ++N K
Sbjct: 183 LVYDYSTLAQRFREMAFLNKGLHIELTDERDLDGSGKPKSETFQFAGGIVDFVNYINEGK 242
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ L+ + F + D T+++A+QW S S+ +L +AN+I T +GGTH++G K +LTRT+
Sbjct: 243 ETLNKPIYFEAESDDGTVEIAMQWSSSYSSNGILAFANNINTHEGGTHLDGFKNALTRTI 302
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N + +K+KD +LSG+ REGL IISV++ +P+FEGQTKT+LGN E+R +V +V
Sbjct: 303 NDYARTHGILKEKDSNLSGDDTREGLAAIISVKLHDPQFEGQTKTKLGNTEIRGLVQGAV 362
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L E+LE +P I+ K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS
Sbjct: 363 TKGLAEFLEENPAPAKRIIGKATQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSK 422
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SEIFIVEGDSAGGSAKQ RDR++QAILPLRGKILNVER ++ I +LI A
Sbjct: 423 DPALSEIFIVEGDSAGGSAKQARDRKYQAILPLRGKILNVERAGLNRALSSDTISSLITA 482
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G+D+ +A RYH+III+TDADVDGAHIR LLLTFFYRY L + G IY+ PP
Sbjct: 483 IGTNI-GDDYNGDAARYHRIIIMTDADVDGAHIRCLLLTFFYRYMPDLINRGYIYIAQPP 541
Query: 606 LYKVER-----GKQVQYCYDDAELKKVKSSFPSNA-LYSIQRFKGLGEMMPVQLWETTLN 659
LY +++ GK ++Y ++D + +A Y +QR+KGLGEM P QLWETT+
Sbjct: 542 LYGLKKKNSKSGKILKYLFNDEAKDALMEELGDDAEKYDMQRYKGLGEMDPGQLWETTME 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R L Q+ IEDAA A + S LMG +V+ RKE IQ A V LDI
Sbjct: 602 PETRTLLQVSIEDAAAAELAVSELMGDQVEPRKEFIQKHARDVRF--LDI 649
>gi|393809339|gb|AFN25843.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 438/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|147921290|ref|YP_684896.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
gi|110620292|emb|CAJ35570.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
Length = 635
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/643 (50%), Positives = 450/643 (69%), Gaps = 26/643 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++TY + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AGY + I+V
Sbjct: 7 AQTYDASSIQVLEGLEAVRKRPSMYIGSTDYRGLHHLVYEVVDNSIDEALAGYCNAIDVT 66
Query: 134 L-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ + DN IP+++H K ALE V+T+LHAGGKF + Y VSGGLHGVG+
Sbjct: 67 INPNGSVTVTDNGRGIPVEMHEKYKKPALEIVMTILHAGGKFDNRT--YKVSGGLHGVGV 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+G + Q+Y +GKPV C V + D+ GT+ F PDK +F
Sbjct: 125 SVVNALSEYLEVEVKRNGKVFFQRYEKGKPV----CEVKIIGETDQTGTKTTFKPDKSIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T ++F + +A R+RELA+LN + I L SD + EY + GG+ +++++LN D
Sbjct: 181 ET-VEFQFDILANRLRELAYLNKGIRITL----SDLGAQKSAEYHYEGGINQFIEYLNQD 235
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH + F ++ D +++++Q+ +D YS+ +L +AN+I T +GGTH+ G +A+LTR
Sbjct: 236 KTVLHPKPIYFEREKDTTKVEISMQY-NDGYSEVILAFANNINTHEGGTHLSGFRAALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N +K+ +K D+ LSGE +REGLT IISV++ NP+FEGQTKT+LGN +V+ +V+
Sbjct: 295 TVNDYARKNNMLKG-DMVLSGEDIREGLTAIISVKLTNPQFEGQTKTKLGNSDVKGIVES 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V + L +YLE +P I+ K++ A +A AA++AR+L R+KS L S+LPGKLADCS
Sbjct: 354 LVGDGLNDYLEENPADARKIIEKTVQAFQAREAARKARELTRRKSALEGSTLPGKLADCS 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ E++IVEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ + ++ EI+ LI
Sbjct: 414 EKDASKCELYIVEGDSAGGSAKQGRNRLFQAILPLRGKILNVEKARLNKILESAEIRALI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG GV GEDF + RYHKII++TDADVDGAHIRTLLLTFFYRY + + + G +Y+
Sbjct: 474 TALGTGV-GEDFVLDKARYHKIILMTDADVDGAHIRTLLLTFFYRYMQQIVEAGFVYIAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++++GK+ +Y Y D EL + + + SIQR+KGLGEM P QLW TT++P R
Sbjct: 533 PPLYRIKKGKEEKYVYSDRELNEALEAMGRTNV-SIQRYKGLGEMNPEQLWSTTMDPATR 591
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ Q+ +ED EA+ F+ LMG +V+ R+E I +NA + NLD
Sbjct: 592 TMYQVKLEDVIEADRTFTLLMGDKVEPRREFIVKNAKFVKNLD 634
>gi|312897423|ref|ZP_07756847.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
gi|310621484|gb|EFQ05020.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
Length = 647
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 336/645 (52%), Positives = 455/645 (70%), Gaps = 31/645 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG++QIQVLEGLEAVRKRP MYIGST +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 18 SYGADQIQVLEGLEAVRKRPGMYIGSTSLKGLHHLVYEVVDNSIDEALAGYCTHIEVTIE 77
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SV
Sbjct: 78 EDNSITVVDNGRGIPVAMH-KIGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISV 134
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE E+ V RDG + ++RG V +L V P++ + +GT++ F PD ++F
Sbjct: 135 VNALSEQTEIEVKRDGFLWKISFARGLTVNSLE-KVRPLEEGEERGTKVWFKPDSEIFPD 193
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +D T+ R+RELAFLN LTI L +D ++ Y++ GGL +VQ+LN ++
Sbjct: 194 TV-YDFETLKIRLRELAFLNKGLTITL----ADKRTDKKEIYYYEGGLTSFVQFLNENRT 248
Query: 307 PLHDVV----GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
P++ V G + DV +D+ALQ+ +D YS+ +L + N+I T +GGTH+ G ++ LT
Sbjct: 249 PVNQTVISLEGIKSDV---VVDIALQY-NDGYSENILTFVNNIFTEEGGTHLSGFRSGLT 304
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N G+ S +K+ + +LSGE VREGLT IISV+V P+FEGQTKT+LGN EV+ +VD
Sbjct: 305 RTINDYGRSSGIIKENEDNLSGEDVREGLTAIISVKVREPQFEGQTKTKLGNSEVKGIVD 364
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ + L E+ E HP SI++K+++A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 365 NIISDGLKEFFEEHPAEAKSIVTKNINAARARQAARKARELTRRKNALEISSLPGKLADC 424
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P+ +EI++VEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE+ + NEEI+ +
Sbjct: 425 SEKNPDMTEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKIINVEKARLDKILANEEIRAM 484
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYR+ K L EG +Y+
Sbjct: 485 ITAFGTGI-GEEFDITKRRYDKIIIMTDADVDGAHIRTLLLTFFYRFMKPLITEGHVYIA 543
Query: 603 VPPLYKVERGKQVQYCYDDAEL-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY+V +G+ V Y Y D EL K+ NA+ +QR+KGLGEM P QLWETT++P+
Sbjct: 544 QPPLYQVRKGRSVWYLYTDDELTNKLAEVGNENAV--VQRYKGLGEMNPEQLWETTMDPQ 601
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R + ++ +EDA EA+ +FS LMG +V+ R++ IQ NA + NLD
Sbjct: 602 FRTMLKVELEDAVEADRIFSVLMGDKVEPRRKFIQDNAKKVRNLD 646
>gi|256826465|ref|YP_003150424.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
gi|256582608|gb|ACU93742.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
Length = 645
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 332/646 (51%), Positives = 447/646 (69%), Gaps = 22/646 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLE VRKRP MYIGST RGLHHLVYE++DN+VDEA AGY ++I+V +
Sbjct: 9 YDGKDIQVLEGLEPVRKRPGMYIGSTSERGLHHLVYEVVDNSVDEALAGYCTDIQVWICD 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P+D HP + +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 69 DGSIKVQDNGRGIPVDKHPKEHIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS ++V V RDG Y +SRGK V L HV+ DSK GT +RFWPD ++FT
Sbjct: 127 NALSTQMKVQVCRDGKRYEITFSRGKTVEKL--HVVG-DSK-HTGTTVRFWPDPEIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
F++NT+A R RE+AFLN L I L E + D E +E F F G++++V++L T K
Sbjct: 183 TVFNYNTLAERFREMAFLNKGLKITLYDERELDGEGVAKHETFQFQDGIKDFVKFLTTGK 242
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ L+ + F + +++A+QW S ++++ +AN+I TI+GGTH++G K ++TRT
Sbjct: 243 EVLNTKPIYFEAEGPAGEVEVAMQWTSSFSTNSVFSFANNINTIEGGTHLDGFKQAVTRT 302
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ +K+KD +L+G+ REGL+ +ISV++ +P+FEGQTKT+LGN E+R++V +
Sbjct: 303 INDYAREKGILKEKDSNLTGDDCREGLSAVISVKLHDPQFEGQTKTKLGNSEMRQLVSSA 362
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L EYLE +P I++K+ ALKA AA++AR++ R+K+VL S +LPGKLADCSS
Sbjct: 363 VNQGLGEYLEENPTPAKRIINKASQALKAREAARKAREMTRRKNVLDSFALPGKLADCSS 422
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ E+FIVEGDSAGGSAKQ RDR++QAILPLRGKILNVER ++ I +LI
Sbjct: 423 KNAADCEMFIVEGDSAGGSAKQARDRKYQAILPLRGKILNVERAGLHRALSSDTISSLIT 482
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G+DF E RYH+III+TDADVDGAHI+ LLLTFFYRY L + G IY+ +P
Sbjct: 483 AVGTNI-GDDFDAEKARYHRIIIMTDADVDGAHIQILLLTFFYRYMPELINRGYIYIAMP 541
Query: 605 PLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY ++ G K+++Y Y+D L + +P++ S+QR+KGLGEM P QLWETT+ PE R
Sbjct: 542 PLYGIKEGKKKIRYVYNDNALAEAMKDYPTDKKPSVQRYKGLGEMDPDQLWETTMEPETR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+L Q+ IEDAA A S LMG +V+ RKE IQ A V LDI
Sbjct: 602 ILMQVGIEDAAAAERAVSELMGDQVEPRKEYIQKHAKDVRF--LDI 645
>gi|374578727|ref|ZP_09651821.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
gi|374414809|gb|EHQ87244.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
Length = 644
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/651 (50%), Positives = 448/651 (68%), Gaps = 26/651 (3%)
Query: 69 KENPVSKT---YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
KE V +T Y +EQI+VLEGLEAVRKRP MYIG+TG RGLHHLVYEI+DN++DEA AG
Sbjct: 5 KEQLVQETCDHYNAEQIEVLEGLEAVRKRPGMYIGTTGLRGLHHLVYEIVDNSIDEALAG 64
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ I+V + DNSI P+D+HP T K A+E LTVLHAGGKFGGS S Y VS
Sbjct: 65 FCDKIDVFIHEDNSITVVDNGRGIPVDIHPKTGKPAVEVALTVLHAGGKFGGSESAYKVS 124
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVGLSVVNALSE L V V + G Y Q+Y++GKP T L + + + + GT+I+
Sbjct: 125 GGLHGVGLSVVNALSEWLVVEVSKGGHVYRQEYAKGKPTTEL----IKIRTNETSGTKIK 180
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F + +D N +A R+REL+FLN +TI L +D N + +GG+++
Sbjct: 181 FMPDSEIFEDTV-YDFNILAHRLRELSFLNKSITINL----ADERSNVKETFLHSGGIQD 235
Query: 297 YVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V +LN K LH + + D + +++ +Q+ +D+Y++ + YAN+I T +GGTH
Sbjct: 236 FVIYLNKSKDCLHPLPIYIETTKDNVQVEVCIQY-NDSYAENLFSYANNINTQEGGTHEA 294
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K++LTR +N +K+ +K D +LSG+ +REGLT +ISV+VP+P+FEGQTKT+LGN
Sbjct: 295 GFKSALTRVVNDYARKNNMLKATDSNLSGDDIREGLTAVISVKVPDPQFEGQTKTKLGNS 354
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
E+R +VD + E LT +LE +P + + KS+ A +A AA++AR+L R+KS L +SL
Sbjct: 355 EIRGIVDSATGEGLTIFLEENPAIARKFIDKSVQAARARDAARKARELTRRKSALEGTSL 414
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +
Sbjct: 415 PGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILG 474
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N EI+ +I A+G G+ +DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 475 NAEIRAMITAMGTGIS-DDFDIAKARYHKLIIMTDADVDGAHIRTLLLTFFYRYMRPLIE 533
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPL+K+++G+ +QY Y D EL + + IQR+KGLGEM P QLWE
Sbjct: 534 NNYVYIAQPPLFKIKKGRDIQYVYSDVELTNTLEKIGRDKV-EIQRYKGLGEMNPDQLWE 592
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
TT++P R + ++ +EDA +FS LMG +V+ R++ I A ++ NLD
Sbjct: 593 TTMDPANRTILRVTMEDAMRTEEMFSVLMGDKVEPRRDFINRYAKDVRNLD 643
>gi|424780808|ref|ZP_18207678.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
gi|422842733|gb|EKU27182.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
Length = 646
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 327/646 (50%), Positives = 441/646 (68%), Gaps = 24/646 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+A+ I+V
Sbjct: 10 AQNYDASQIQVLEGLEAVRKRPGMYIGSTSEQGLHHLVWEIVDNSIDEALAGFATKIDVI 69
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG
Sbjct: 70 IEEDNSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGS 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS SL+V V+++G Y Q+Y RG+ V L + DR+GT + F PD +F
Sbjct: 128 SVVNALSTSLDVKVYKNGHIYFQEYKRGQVVDDLKI----IGDTDRRGTEVHFVPDPTIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
F+ +T+A R+RELAFLN L I + ED + Q EY + GG+ YV++LN +
Sbjct: 184 KETTVFNFDTLATRVRELAFLNRGLKITI--EDKRKGQEQQREYHYEGGICSYVEFLNDE 241
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ L + + + + ITI++A+Q+ S Y +L +AN+I T +GG H G K++LTR
Sbjct: 242 KEVLFEPPIYCEGEQNNITIEVAMQYTS-GYQSKILSFANNIHTYEGGMHESGFKSALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N+ ++ K +K+ D L GE VREGLT +IS++ P P+FEGQTKT+LGN EVR V D+
Sbjct: 301 VINNYARRQKMIKENDDKLMGEDVREGLTAVISIKHPEPQFEGQTKTKLGNSEVRSVTDR 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V ++ K+L A KA LAAKRAR+ R+K+ L S+LPGKLADCS
Sbjct: 361 LFAEAFDKFLMENPNVAKKVVEKALLATKARLAAKRAREATRKKNELEISNLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S E+ E+FIVEGDSAGGSAKQGRDR +QAILP+RGKILNVE+ + NEEI++L
Sbjct: 421 SREAEKCELFIVEGDSAGGSAKQGRDRNYQAILPIRGKILNVEKATLDKILANEEIRSLF 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G+DF E RYHK++I+TDADVDGAHIR LLLT FYRY + L ++G +Y+
Sbjct: 481 TAMGTGF-GKDFDVEKARYHKLVIMTDADVDGAHIRILLLTLFYRYMRPLVEKGYVYIAQ 539
Query: 604 PPLYKVERGKQVQYCYD--DAE--LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y DAE L++V S P +QR+KGLGEM QLWETT++
Sbjct: 540 PPLYGVKQGKNITYVPSGKDAEDQLQQVLQSLPKTPKPIVQRYKGLGEMDEDQLWETTMD 599
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
PE R + ++ I+DA EAN +F LMG +V+ R++ I+ A+ +D
Sbjct: 600 PEHRAMARVTIDDAEEANRIFEMLMGDQVEPRRQFIEENAHYATID 645
>gi|228474176|ref|ZP_04058913.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
gi|228271871|gb|EEK13208.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
Length = 640
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 438/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 181 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|296330042|ref|ZP_06872526.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672704|ref|YP_003864375.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
gi|296153081|gb|EFG93946.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410947|gb|ADM36065.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
Length = 638
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 326/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L VTV RDG + Q Y RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELVVTVHRDGKIHRQTYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAALETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+ + + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKELEDLLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|398309108|ref|ZP_10512582.1| DNA gyrase subunit B [Bacillus mojavensis RO-H-1]
Length = 638
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 324/641 (50%), Positives = 440/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINILIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y+RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQVYNRGIPVSDLEV----IGETDHTGTTTHFVPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+++++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYEYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDGYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAALETFMLENPDAARKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L+++ + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLEELLQTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|365874562|ref|ZP_09414095.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
gi|363984649|gb|EHM10856.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
Length = 636
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 327/648 (50%), Positives = 441/648 (68%), Gaps = 30/648 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PVS+ Y ++ IQVLEGL AVRKRP MYIG G RGLHHLVYE++DNA+DEA AG+ I+
Sbjct: 4 PVSQ-YTAKDIQVLEGLSAVRKRPGMYIGDQGQRGLHHLVYEVVDNAIDEAMAGFCDTIQ 62
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + D S IP ++HP + A E VLTVLHAG KF Y VSGGLHGV
Sbjct: 63 VTVHPDGSVSVEDNGRGIPTEMHPTMGRPAAEVVLTVLHAGAKF--DKKAYQVSGGLHGV 120
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+SVVNALSE LEVT+WR+ E+ Q Y RG PVT L + D++GTR+ F PD +
Sbjct: 121 GVSVVNALSEWLEVTIWRNRKEHRQSYRRGVPVTDLVIG----EDTDKRGTRVHFMPDGE 176
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F+T ++F + + GR+RELAFLNP +TI +P + + F GG+ +V++LN
Sbjct: 177 IFST-LEFSSDVLLGRLRELAFLNPGVTIIFTDLRQNPPLER--KLHFEGGIASFVEYLN 233
Query: 303 TDK----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
K KP V G + DG+ +++ALQ+ +D Y + + +AN I T++GGTH+ G +
Sbjct: 234 RGKEVLFKPPMVVKGEK---DGVIVEVALQY-NDTYLERIFAFANLINTVEGGTHVSGFR 289
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR +N +K K +KDKD + SG+ ++EGLT +ISV++ P+FEGQTKT+LGN +V+
Sbjct: 290 TALTRIINDQARKEKLLKDKDPNFSGDDLKEGLTAVISVKLLEPQFEGQTKTKLGNGDVK 349
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V E L LE P VL ++ K++ A +A AAK+ARDLVR+KS + LPGK
Sbjct: 350 GIVDSVVYEGLKVLLEDQPQVLRPVVEKAVKARQAREAAKKARDLVRRKSAMSGMDLPGK 409
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCS+ PEE E++IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N++
Sbjct: 410 LADCSNRKPEECELYIVEGDSAGGSAKMGRDRSFQAILPLRGKILNVEKARLDKILSNDQ 469
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
++ +I+ALG GV G++F LRYHKI ++ DADVDGAHIRTLLLT F+RY + + G
Sbjct: 470 VRTIIQALGCGV-GDEFDYSKLRYHKIFLMADADVDGAHIRTLLLTLFFRYMPQIIENGH 528
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+YV PPLY+V+ G+ V YCY D EL+++ S S+QR+KGLGEM P QLWETT+
Sbjct: 529 LYVAQPPLYRVQEGRNVHYCYSDRELRELMQRL-SGKKASVQRYKGLGEMNPEQLWETTM 587
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+P R++K++ +EDA A+ +FS LMG V R+E I+ +A + NLD
Sbjct: 588 DPANRVIKRVEVEDAVLADELFSILMGDAVGPRREFIEAHAKEVRNLD 635
>gi|354559350|ref|ZP_08978600.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
gi|353542939|gb|EHC12399.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
Length = 644
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/650 (51%), Positives = 450/650 (69%), Gaps = 25/650 (3%)
Query: 68 FKEN-PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
F+E P + Y ++QI VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY
Sbjct: 7 FQEKVPENVEYNADQIVVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGY 66
Query: 127 ASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
IEV + DN+I P+D+HP K A+E LTVLHAGGKF ++S Y VSG
Sbjct: 67 CDTIEVIIRKDNTICVKDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKF--NNSAYKVSG 124
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
GLHGVGLSVVNALS+ L V V +DG YHQ+Y RGK +T LT + + GT+I F
Sbjct: 125 GLHGVGLSVVNALSKWLYVDVKKDGKMYHQEYERGKTMTELTI----IGESEGSGTQITF 180
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
PD ++F F+ + +A R+REL+FLN K++I L D K++ Y+ GG+ ++
Sbjct: 181 APDPEIFEETTVFEFDILAHRLRELSFLNKKVSITL----IDERKDEREVYYHTGGIIDF 236
Query: 298 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V+++N +K LH + F D + +++ +Q+ +D+Y++ + YAN+I T +GGTH G
Sbjct: 237 VKYINKNKDVLHPQPIYFESFKDNVEVEIGIQY-NDSYTENLFSYANNINTQEGGTHEAG 295
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
KA+LTR +N +K+ +K D +LSG+ +REG+T +ISV+VP P+FEGQTKT+LGN E
Sbjct: 296 FKAALTRVVNDYARKNNIIKANDANLSGDDIREGMTAVISVKVPEPQFEGQTKTKLGNSE 355
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
+R +VD V E L +LE +P V ++ KSL AL+A AA++AR+L R+KS L SSLP
Sbjct: 356 IRSIVDSIVGEGLNIFLEENPAVGKKVIEKSLQALRAREAARKARELTRRKSALEVSSLP 415
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P+ E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N
Sbjct: 416 GKLADCSWKEPDLCEMYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDRILGN 475
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EI+ +I A+G G+ +DF + RYHK+II+TDADVDGAHIR LLLTFFYR+ K L D
Sbjct: 476 AEIRAMITAMGTGI-SDDFDLDKARYHKLIIMTDADVDGAHIRILLLTFFYRFMKPLIDN 534
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ PPLY+V++G+ V Y Y D EL K + IQR+KGLGEM P QLWET
Sbjct: 535 GYVYIAQPPLYQVKKGRDVSYQYTDVELSKALDRVGRDKAV-IQRYKGLGEMNPEQLWET 593
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
T++P +R + Q+ ++DA A+ +F+ LMG +V+ R+E +I+ A ++ NLD
Sbjct: 594 TMDPAKRTILQVTMDDAMIADELFTKLMGDKVEPRREFIIKYAKDVRNLD 643
>gi|425737844|ref|ZP_18856114.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
gi|425480997|gb|EKU48159.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
Length = 639
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 336/651 (51%), Positives = 438/651 (67%), Gaps = 26/651 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
K+N +++YG+ QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA
Sbjct: 1 MKDNNNTESYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYA 60
Query: 128 SNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
S I V + DN IP+D+ + A+E +LTVLHAGGKFGG S Y VSGG
Sbjct: 61 SEITVTIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGDS--YKVSGG 118
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG SVVNALSE LEV V+R+ YHQ Y +G P L + GT IRF
Sbjct: 119 LHGVGSSVVNALSEDLEVYVYRNETVYHQAYKKGVPQFDLK----EIGDTSLNGTTIRFK 174
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
D ++F + + T+ RIRELAFLN ++I L+ E + E+ + GG++ YV
Sbjct: 175 ADPEIFQETTTYQYETLQNRIRELAFLNKGISITLKDEREEEEREDNYY--YEGGIKSYV 232
Query: 299 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
LN +K PLH+ V R+DV+ +++ALQ+ + Y+ +L YAN+I T +GGTH
Sbjct: 233 DLLNENKDPLHESPIYVHEQREDVE---VEIALQY-NRGYATNLLTYANNIHTYEGGTHE 288
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G K +LTR LNS G+K++ +K+ L+GE REGLT I+S++ +P+FEGQTKT+LGN
Sbjct: 289 DGFKRALTRVLNSYGQKNRLLKEDKERLTGEDTREGLTAIVSIKHGDPQFEGQTKTKLGN 348
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EVR++VD+ E +L +P V I+ K L A +A +AAK+AR++ R+KS L S+
Sbjct: 349 SEVRQIVDRVFSELFERFLMENPQVGKIIVEKGLMASRARIAAKKAREVTRRKSGLEVSN 408
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P ESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ +
Sbjct: 409 LPGKLADCSSKDPSESEIFLVEGDSAGGSTKLGRDSRTQAILPLRGKILNVEKSRLDKIL 468
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N EI+ +I A G G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L
Sbjct: 469 NNNEIRMMITAFGTGI-GEDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLV 527
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G IY+ PPLYK+ +GKQ Y ++D EL K+KS +SI R+KGLGEM QLW
Sbjct: 528 EAGYIYIAQPPLYKLTQGKQKYYVFNDRELDKLKSELKPTPKWSIARYKGLGEMDADQLW 587
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
ETT+NPE R + Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 588 ETTMNPEHRSMLQVKLEDAIEADQTFEMLMGDIVENRRQFIEDNAVYANLD 638
>gi|443631606|ref|ZP_21115787.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443349411|gb|ELS63467.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 638
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 324/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV RDG + Q Y RG PV L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVADLEI----IGETDHTGTTTHFIPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D EL+++ + P +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|314935205|ref|ZP_07842558.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
gi|313656540|gb|EFS20279.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
Length = 644
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/642 (51%), Positives = 438/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V S ++ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGSTEKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|402814456|ref|ZP_10864050.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
gi|402508303|gb|EJW18824.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
Length = 636
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/641 (51%), Positives = 437/641 (68%), Gaps = 23/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY + IEV +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCTKIEVTVH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVVDNGRGIPVGIQEKMKRPAVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS SL VTV RDG + Q+Y RG P L + + GT IRF PD +VFT
Sbjct: 125 VNALSTSLVVTVKRDGHIHQQEYRRGVPQADLEI----IGDTEETGTTIRFQPDPEVFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++T+ RIRELAFLN + + L +D Q + + GG++E+V++LN +++
Sbjct: 181 TTEYDYDTLLSRIRELAFLNKGIQMVL----TDERTGQSETFKYDGGIKEFVEYLNRNRE 236
Query: 307 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + D IT ++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 237 KMHEQPIYVEGSKDYITCEVALQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRII 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +KD + +LSG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NDYARKMNLMKDNNSNLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRSIVESVF 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E E+L +P V I+ K + A +A AA+RAR+L R+KS L SSLPGKLADCSS
Sbjct: 356 SEKFMEFLNENPMVSKKIVEKGMQASRAREAARRARELTRRKSALEVSSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
E+FIVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ + N EI+ +I A
Sbjct: 416 DAAHCELFIVEGDSAGGSAKQGRDRHFQAILPLKGKILNVEKSRLDKILSNAEIRAIITA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PP
Sbjct: 476 LGTGI-GEDFDLEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPP 534
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYK+ER K V+Y D + ++ + F A ++QR+KGLGEM QLWETT++PE R +
Sbjct: 535 LYKIERNKIVRYADSDKQKDEIIAEFGEGAKVNVQRYKGLGEMNAEQLWETTMDPESRKM 594
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ +DA A+ VF +LMG V+ R++ IQ A V NLD
Sbjct: 595 LQVSFDDAKMADDVFDTLMGDNVEPRRDFIQRHAKFVKNLD 635
>gi|397905911|ref|ZP_10506745.1| DNA gyrase subunit B [Caloramator australicus RC3]
gi|397161079|emb|CCJ34080.1| DNA gyrase subunit B [Caloramator australicus RC3]
Length = 631
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 334/644 (51%), Positives = 448/644 (69%), Gaps = 25/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+SK Y + +IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYEI+DNA+DEA AG+ NI+V
Sbjct: 1 MSKKYSASEIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNAIDEALAGFCKNIDV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+HP KSA+E V TVLHAG KFGG S LHGVG
Sbjct: 61 FIHKDNSITVIDDGRGIPVDIHPKLKKSAVEVVFTVLHAGSKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS+ L V V RDG + QKY RGKPV+ L + + GT++ F D ++
Sbjct: 119 ASVVNALSKWLIVEVKRDGKIFRQKYERGKPVSELEV----IGEAEETGTKVTFLADDEI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T +++++ ++ R+RELAFLN + I L E D ++ Y + GG++E+V++LN
Sbjct: 175 FETT-EYEYDVLSQRLRELAFLNKGIAINLIDERVDKKET----YHYEGGIKEFVKYLNR 229
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LHD + F D +++ALQ+ +D Y++ + +AN+I T +GGTH+ G K +LT
Sbjct: 230 NKEVLHDEPIYFEASKDDTVVEIALQY-NDGYNENIFSFANNISTTEGGTHVSGFKTALT 288
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+ +N +K +K+ + +L GE REG+T +ISV++ NPEFEGQTKT+LGN EVR +VD
Sbjct: 289 KVINDYARKYGFLKENEKNLQGEDTREGITAVISVKITNPEFEGQTKTKLGNTEVRGIVD 348
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V + ++ +LE +P V I+ K L A +A AA++AR+L R+K+VL ++SLPGKLADC
Sbjct: 349 AIVTDKVSAFLEENPSVAKVIVEKCLLASRAREAARKARELTRRKNVLENTSLPGKLADC 408
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P+ EIF+VEGDSAGGSAK GRDRRFQAILPLRGKI+NVE++ + +EI+N+
Sbjct: 409 SEKDPKLCEIFLVEGDSAGGSAKGGRDRRFQAILPLRGKIMNVEKQRLDKILAYQEIRNM 468
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G+DF E +RY KIII+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+
Sbjct: 469 ITAFGAGI-GDDFDIEKIRYDKIIIMTDADVDGAHIRTLLLTFFYRYMRPLIEEGHVYIA 527
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ +GK + Y Y D EL+ + + + IQR+KGLGEM QLWETT+NPE
Sbjct: 528 QPPLYKISKGKNIYYAYSDRELEAKLNEIGRDNV-EIQRYKGLGEMNAEQLWETTMNPET 586
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L ++ IEDA EA+ VF+ LMG +V+ R+E IQ NA + NLD
Sbjct: 587 RTLLKVTIEDAVEADEVFTILMGDKVEPRREFIQKNAKRVQNLD 630
>gi|33469292|gb|AAQ19683.1| DNA gyrase subunit B [Staphylococcus haemolyticus]
Length = 644
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 437/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 129 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGISITLRDEREDVEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ + + D + I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHEEPIYIHQTKDDVEIEIAMQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 303 ILNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L HP+V ++ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFAEHFERFLYEHPNVARIVVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKKPEESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+KS + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLAQGKQKYYVFNDRELDKLKSELSPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAIEADHTCEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|295106380|emb|CBL03923.1| DNA gyrase subunit B [Gordonibacter pamelaeae 7-10-1-b]
Length = 656
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 334/657 (50%), Positives = 440/657 (66%), Gaps = 34/657 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AGY IEV +
Sbjct: 10 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGYCDTIEVWIHP 69
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D HP +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 70 DNSITVDDNGRGIPVDKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG--TRIRFWPDKQVFT 245
NALS +EV+V+++G++Y + GK T L K R+G T + FWPD +FT
Sbjct: 128 NALSSRVEVSVFKEGVQYDISFDHGK-----TAEKLREVGKVRRGNGTTVTFWPDPTIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN-------EYF-FAGGLEEY 297
+D++T+A R RE+AFLN L I L E +P + E F +AGG+ ++
Sbjct: 183 DTTVYDYDTLASRFREMAFLNKGLKIILHDERVNPGSTLSDLAPEPRTEVFQYAGGIVDF 242
Query: 298 VQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
V++LN K+ L+ + F + D T+++A+QW S +++++ +AN+I T +GGTH++G
Sbjct: 243 VKFLNEGKETLNKPIYFEAENDDGTVEVAMQWSSSYSTNSVMAFANNINTHEGGTHLDGF 302
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K ++TRT+N + +K+KD +LSG+ REG IISV++ +P+FEGQTKT+LGN E+
Sbjct: 303 KQAVTRTINEYARAKGILKEKDSNLSGDDTREGCAAIISVKLHDPQFEGQTKTKLGNTEI 362
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +V +V + L EYLE +P I+ K+ ALKA AA++AR++ R+K VL S +LPG
Sbjct: 363 RPLVQNAVTQGLAEYLEENPKPAKRIIDKATQALKAREAARKAREMTRRKGVLDSFALPG 422
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS TP +SEIFIVEGDSAGGSAKQ RDR+ QAILPLRGKILNVER ++
Sbjct: 423 KLADCSSKTPADSEIFIVEGDSAGGSAKQARDRKTQAILPLRGKILNVERAGLHRSLSSD 482
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
I +LI A+G + G+DF + RYH+III+TDADVDGAHIR LLLTFFYRY L + G
Sbjct: 483 TISSLITAIGTNI-GDDFDADQARYHRIIIMTDADVDGAHIRCLLLTFFYRYMPELINRG 541
Query: 598 CIYVGVPPLY----KVERGKQVQ-YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
IY+ PP++ K R +++ Y YD++ L V + + + + +QR+KGLGEM P Q
Sbjct: 542 YIYIAQPPIFGLKKKNSRSPKIERYIYDESALGSVLAEYDNPDKFDVQRYKGLGEMDPDQ 601
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
LWETT+ PE R L Q+ I+DAAEA V S LMG +V+ RKE IQ A V LDI
Sbjct: 602 LWETTMEPETRTLLQVNIDDAAEAERVVSELMGDQVEPRKEFIQKHARDVRF--LDI 656
>gi|336477181|ref|YP_004616322.1| DNA gyrase subunit B [Methanosalsum zhilinae DSM 4017]
gi|335930562|gb|AEH61103.1| DNA gyrase, B subunit [Methanosalsum zhilinae DSM 4017]
Length = 634
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 329/640 (51%), Positives = 439/640 (68%), Gaps = 24/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AG+ ++I+V +
Sbjct: 7 YDATNIQVLEGLEAVRKRPSMYIGSVDSRGLHHLVYEVVDNSIDEALAGFCTSIDVIINP 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D HP KSALE V+T+LHAGGKF S+ Y VSGGLHGVG+SVV
Sbjct: 67 DGSVTIIDNGRGIPVDTHPKYGKSALEVVMTILHAGGKFDKST--YKVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE + V V R+G Y QKY RG P + + D GT I+F PD +F
Sbjct: 125 NALSEWMIVEVKRNGKHYLQKYKRGIPEEDVAL----IGEADGSGTIIKFKPDSTIFE-E 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ + ++T++ R+RELAFLN + I++ SD E + +Y GG+ +V LN +++
Sbjct: 180 LDYSYDTLSSRLRELAFLNKGIRISIGDRRSDEESKETFQY--EGGIRSFVDHLNKNRQT 237
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD + ++ D I +++A+Q+ +D Y++ + +AN+I T +GGTH+ G K++LTR N
Sbjct: 238 LHDDPIYLEREKDNIMVEIAMQY-TDTYAEHVYSFANNINTHEGGTHLIGFKSALTRVTN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
KK+ KD D LSGE VREGLT IISV++P P+FEGQTKTRLGN E++ +V+ V
Sbjct: 297 DYIKKNNLTKD-DSKLSGEDVREGLTAIISVKIPEPQFEGQTKTRLGNSELKGIVESLVS 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+++ E +P + + I+ KSLSA +A AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 356 ESLSDFFEENPKIANQIIQKSLSAKRAREAAKKARELTRRKSALEVSTLPGKLADCSEKD 415
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SE+++VEGDSAGGSAKQGR+R FQAILP RGKI+NVE+ + KN+EI +LI AL
Sbjct: 416 PSVSELYLVEGDSAGGSAKQGRNRAFQAILPFRGKIINVEKSRLGKILKNKEILSLITAL 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+DF RYHKIII+TDADVDGAHIRTL+LTF +RY L D G +Y+ PPL
Sbjct: 476 GTGL-GDDFDISKTRYHKIIIMTDADVDGAHIRTLILTFIFRYMTPLIDAGYVYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+++GK Y Y + ELK+ + S QR+KGLGEM P QLWETT++PE R L
Sbjct: 535 YKIKKGKAEHYAYTEKELKQKLKQLGEKGI-SYQRYKGLGEMNPEQLWETTMSPETRTLL 593
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ ++DA A+ +FS LMG V RKE IQ +A +VNLD
Sbjct: 594 KVTMDDAVTADEIFSILMGDEVAPRKEFIQAHAREVVNLD 633
>gi|317120855|ref|YP_004100858.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
gi|315590835|gb|ADU50131.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
Length = 635
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 331/642 (51%), Positives = 440/642 (68%), Gaps = 31/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVR+RP MYIGSTGPRGLHHL++E++DNAVDEA AG + I V L A
Sbjct: 6 YDESQIQVLEGLEAVRRRPGMYIGSTGPRGLHHLIWEVVDNAVDEALAGRCTAITVTLHA 65
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ +HP K +E VLT+LHAGGKF G + Y VSGGLHGVG+SVV
Sbjct: 66 DGSCSVRDNGGGIPVGIHPKVGKPTVEVVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V R+G + Q+Y RGKP T L V D D GT +RF PD ++F
Sbjct: 124 NALSEWLEVEVRREGRIHRQRYRRGKPDTDLEV-VGTTDPAD-TGTYVRFKPDPEIFEET 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F ++ + GR+RE+A LN L I L+ E + + N + F GGL +V LN K+P
Sbjct: 182 -EFKYDVVVGRLREIALLNSGLYIELKDERT----GERNLFQFMGGLRSFVALLNRTKEP 236
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH + + ++ + DG+ +++ALQW + +Y +T+ +AN+I T +GGTH G K +LTR +N
Sbjct: 237 LHPEPISYKGERDGVEVEMALQWTT-SYVETLYSFANTIHTHEGGTHEAGFKMALTRVVN 295
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K+ +K+ + +LSG+ +REGLT ++SV++P P+FEGQTKT+LGN EVR VVD
Sbjct: 296 DYARKANLIKNGEENLSGDDIREGLTAVLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTG 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L Y E +P V ++ K+++A++A AA++AR+L R+KS L ++LPGKL DC+
Sbjct: 356 EALATYFEENPQVARRVVEKAITAMRAREAARKARELTRRKSALEVTALPGKLTDCTVRD 415
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P +E+FIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNVE+ + ++EI+ LI A+
Sbjct: 416 PAMAELFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNVEKARLDKILAHDEIRALITAI 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF + RYHKII++TDADVDGAHIRTLLLTFF+RY K L + G +Y+ PPL
Sbjct: 476 GTGI-GEDFDIQKARYHKIILMTDADVDGAHIRTLLLTFFFRYMKPLIEAGYVYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAEL----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
Y V GK+ Y YDD +L +++ P+ QRFKGLGEM QLWETT+NPE
Sbjct: 535 YLVRMGKEEHYFYDDDQLEAFFRQIGKRMPA------QRFKGLGEMNAEQLWETTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
R L Q+ +EDA A+ +FS LMG+RV+ R+E I+ A V
Sbjct: 589 RTLLQVTLEDAMAADQIFSILMGSRVEPRREFIEQHARKVRF 630
>gi|296131558|ref|YP_003638805.1| DNA topoisomerase IV subunit B [Thermincola potens JR]
gi|296030136|gb|ADG80904.1| DNA topoisomerase IV, B subunit [Thermincola potens JR]
Length = 635
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 336/647 (51%), Positives = 445/647 (68%), Gaps = 25/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E + YG+ QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+
Sbjct: 2 EQNTNHNYGASQIQVLEGLEAVRRRPGMYIGSTSTRGLHHLVYEVVDNSIDEALAGFCDK 61
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + DNSI P+D+HP K A+E VLT+LHAGGKFGG GY VSGGLH
Sbjct: 62 IEVIIHHDNSITVIDNGRGIPVDIHPKIGKPAVEVVLTILHAGGKFGGD--GYKVSGGLH 119
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALSE LEV V RD YHQ+Y RG PVT L + + GT+I F PD
Sbjct: 120 GVGVSVVNALSEWLEVEVKRDNHIYHQRYERGLPVTELKI----IGDSNSTGTKITFKPD 175
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++F + F+ T++ R++EL+FLN LTI L+ E EK +E GG+ ++V+
Sbjct: 176 HEIFEDLV-FNFETLSQRLKELSFLNKGLTIILKDERDGNEKTFQHE----GGIIDFVKH 230
Query: 301 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN +K LH + + F + D + +++ALQ+ +D Y++ + + N+I T +GGTH G K
Sbjct: 231 LNKNKDVLHPEPIYFEGEKDDVMVEIALQY-NDGYTENIFSFVNNIHTHEGGTHEAGFKT 289
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N +K +K+ + +L+GE +REGLT IISV+V P+FEGQTKT+LGN EVR
Sbjct: 290 ALTRVVNDYARKYNLLKENENNLTGEDIREGLTAIISVKVREPQFEGQTKTKLGNSEVRG 349
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E + +LE HP I K+++A +A AA++AR+L R+K+ L S+SLPGKL
Sbjct: 350 IVDAVVVEGVGTFLEEHPPFAKRITEKAINAARAREAARKARELTRRKNALESTSLPGKL 409
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI
Sbjct: 410 ADCSLKDPAVCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKVLANEEI 469
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+ +I A+G G+ +DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + L + G +
Sbjct: 470 RAMITAMGTGIS-DDFDISKARYHKLIIMTDADVDGAHIRTLLLTFFYRYMRPLIEAGYV 528
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYKV++ K Y Y D EL+K+ + + S+QR+KGLGEM P QLWETT+N
Sbjct: 529 YIAQPPLYKVKKNKIDNYVYSDHELEKLLNQIGREGV-SLQRYKGLGEMNPEQLWETTMN 587
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE R + ++ +EDA A+ +F+ LMG +V+ R+E IQ A V NLD
Sbjct: 588 PETRTILRVNLEDAMIADEIFTILMGDKVEPRREFIQTHAKEVRNLD 634
>gi|158319065|ref|YP_001511572.1| DNA gyrase subunit B [Alkaliphilus oremlandii OhILAs]
gi|158139264|gb|ABW17576.1| DNA gyrase, B subunit [Alkaliphilus oremlandii OhILAs]
Length = 636
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 333/643 (51%), Positives = 441/643 (68%), Gaps = 24/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y +EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA GY I V
Sbjct: 6 TQEYSAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALGGYCDTILVT 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+D+HP T KS LETVLTVLHAGGKFGG S LHGVG+
Sbjct: 66 IKEDDSIEVIDNGRGIPVDVHPQTGKSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGV 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LE T+ DG Y Q++ RG PV + + +GT I F PD ++F
Sbjct: 124 SVVNALSEYLEATIKLDGKVYWQRFERGNPVEDIKI----IGETKEKGTTILFKPDAEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ F + T+ R+RELAFLN + I L D K Q +++ GG+ EYV++LN +
Sbjct: 180 EETV-FQYETLEYRLRELAFLNKGIKIVLI--DKREGKEQEKVFYYDGGIMEYVKYLNKN 236
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH+ ++ F K+ + +++A+Q+ +D Y++ + YAN+I T +GGTH+ G +ASLTR
Sbjct: 237 KSVLHEKIIHFEKEKETSVVEVAMQY-TDTYTENIFSYANNINTHEGGTHLSGFRASLTR 295
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK+ +K+KD + GE +REGLT +ISV++ P+FEGQTKT+LGN E+R +V+
Sbjct: 296 IVNDYAKKAGFLKEKDANFLGEDIREGLTAVISVKLTEPQFEGQTKTKLGNSEMRGIVEN 355
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
SV E L +LE +P I+ KSL A +A AAK+AR+L R+K L S +LPGKLADCS
Sbjct: 356 SVSEALEAFLEENPSDAKIIVEKSLRAQRAREAAKKARELTRRKGALESMALPGKLADCS 415
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P SEI+IVEG+SAGGSAKQGRDR QAILPLRGKILNVE+ M ++EI+N+I
Sbjct: 416 EKDPALSEIYIVEGNSAGGSAKQGRDRSIQAILPLRGKILNVEKARLDKMLNSDEIRNMI 475
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G + GE+F E LRYHKI+I+TDADVDGAHIRTLLLTF +R+ K L + G IY+
Sbjct: 476 TAFGTSI-GEEFDIEKLRYHKIVIMTDADVDGAHIRTLLLTFLFRFMKPLIERGYIYIAQ 534
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+++GK +Y Y + E++ S N IQR+KGLGEM P QLWETT+NPE R
Sbjct: 535 PPLYKLKKGKVEEYAYSEEEMQVKLSEMGGNV--DIQRYKGLGEMNPEQLWETTMNPETR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ IEDAA A+ +F++LMG +V+ R+E I QN+ + NLD
Sbjct: 593 TFLQVTIEDAAAADNIFTTLMGDKVEPRREFIEQNSKYVTNLD 635
>gi|410723309|ref|ZP_11362553.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
gi|410603355|gb|EKQ57790.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
Length = 635
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 336/647 (51%), Positives = 448/647 (69%), Gaps = 32/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY IEV
Sbjct: 5 NKKYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCRKIEVN 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP KS +E ++T+LHAGGKFGG GY VSGGLHGVG
Sbjct: 65 INEDNSIKVTDDGRGMPVGIHPKMGKSTVEVIMTILHAGGKFGGE--GYKVSGGLHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE VTV RDG + QKYSRGK + LT + D GT F PD ++F
Sbjct: 123 SVVNALSEECTVTVKRDGHIWQQKYSRGKVLNELT----QIGDSDETGTETYFKPDVEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I +D ++ R+RELAFLN + I L + D E+ + + GG++ +V +LN +
Sbjct: 179 DETI-YDFEILSQRLRELAFLNKGIYIKLIDKRYDKEE----VFHYEGGIKSFVSYLNRN 233
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K PLH+ + G + D +++++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +
Sbjct: 234 KVPLHEEPIYIEGLK---DNVSVEIALQY-NDGYTENIFTFANNIDTVEGGTHLIGFKTA 289
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR N KK +K+ D + +G+ +REGLT +ISV++ P+FEGQTKT+LGN EVR +
Sbjct: 290 LTRVFNDYAKKFGHIKENDKNFTGDDIREGLTAVISVKIEEPQFEGQTKTKLGNSEVRGI 349
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V E + +LE +P++ I+ K+L A +A AA++AR+L R KSVL S+LPGKLA
Sbjct: 350 VDSIVGENIGVFLEENPNIGKMIVDKALMAARARDAARKARELTR-KSVLERSTLPGKLA 408
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P E EI+IVEGDSAGGSAKQGR+R+FQAILPLRGKILNVE++ + + I+
Sbjct: 409 DCSSKDPRECEIYIVEGDSAGGSAKQGRNRKFQAILPLRGKILNVEKQRLDRILNADTIR 468
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+++ A G G+ G DF E +RY++III+TDADVDGAHIRTLLLTFFYRY + L D+G +Y
Sbjct: 469 SMVTAFGAGI-GNDFDVEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRQLVDDGHVY 527
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYKV + K+ Y Y D+EL+ V S + IQR+KGLGEM QLW+TT++
Sbjct: 528 IAQPPLYKVSKSKKDYYAYSDSELENVLSELGGKDNSTDIQRYKGLGEMNASQLWDTTMD 587
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
PE+R+L ++ IEDA A+ +F+ LMG +V+ RKE I QNA N+VNLD
Sbjct: 588 PEKRILLKVNIEDAMAADEIFTILMGEKVEPRKEFITQNAKNVVNLD 634
>gi|402300224|ref|ZP_10819751.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
gi|401724614|gb|EJS97959.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
Length = 641
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 434/644 (67%), Gaps = 26/644 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I+V +
Sbjct: 10 QSYDASQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEAMAGFCDQIDVLI 69
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 70 EEDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 127
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV + RDG YHQKY +G P L + + GT+ F PD ++F
Sbjct: 128 VVNALSTMLEVEIERDGNLYHQKYHQGVPAADLAI----IGKSENSGTKTHFKPDPEIFQ 183
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
I +D++T+A R+RELAFLN LTI + ++ED K Y++ GG+ +V+ LN
Sbjct: 184 ETIVYDYDTLALRLRELAFLNKGLTITITDKREDGKSAK-----YYYEGGIASFVKHLNR 238
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ LHD + + DG+ +++A+Q+ +D Y + +AN+I T +GGTH G K +LT
Sbjct: 239 TKEVLHDEPIHIEGEKDGLNVEVAVQY-NDGYVGNLYSFANNISTHEGGTHESGFKTALT 297
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ VK+ D +L+G+ VREGLT IISV++P+P+FEGQTKT+LGN E R + D
Sbjct: 298 RVINDYARKNSLVKENDPNLTGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E+ + +L +P V I+ K L A +A AAK+AR+L R+KS L S+LPGKLADC
Sbjct: 358 SLFSEHFSRFLIENPQVARKIVEKGLMASRAREAAKKARELTRRKSALEVSALPGKLADC 417
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+S SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N EI+ +
Sbjct: 418 ASKDASISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILANNEIRAM 477
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G GV G DF E RYHKIII+TDADVDGAHIRTLLLTFFYRY K L + G +Y+
Sbjct: 478 ITAFGTGVGG-DFDIEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMKPLIEYGYVYIA 536
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV GK++QY Y EL + S+P A IQR+KGLGEM P QLWETT++PE
Sbjct: 537 QPPLYKVTHGKEIQYAYVQKELDPILKSYPEGAKIGIQRYKGLGEMNPTQLWETTMDPEH 596
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L Q+ +EDA +A+ +F LMG RV+ R++ IQ NA + NLD
Sbjct: 597 RTLLQVTLEDAIKADEIFEILMGDRVEPRRDFIQENAQYVENLD 640
>gi|383786730|ref|YP_005471299.1| DNA gyrase subunit B [Fervidobacterium pennivorans DSM 9078]
gi|383109577|gb|AFG35180.1| DNA gyrase, B subunit [Fervidobacterium pennivorans DSM 9078]
Length = 641
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 328/648 (50%), Positives = 444/648 (68%), Gaps = 27/648 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++ I+VL+GLE VR+RP MYIGSTG GLHHLVYEI+DN++DEA GY I+V
Sbjct: 10 MTNQYTAQNIKVLKGLEPVRERPGMYIGSTGKTGLHHLVYEIVDNSIDEAIQGYCDKIKV 69
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP+D+HP T SALE V+T LHAGGKF S Y VSGGLHGVG
Sbjct: 70 TIKADGSVEVEDNGRGIPVDIHPETGTSALEVVMTTLHAGGKF--SKESYKVSGGLHGVG 127
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE +EV V RDG Y Q+Y+RG+ VT + + ++GT +RF PDK +
Sbjct: 128 ASVVNALSEWMEVEVHRDGKIYRQRYARGQKVTEVEV----IGETTKRGTIVRFKPDKTI 183
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FTT ++FD +TI R+R+LAFLNP +TI E D N + ++GGL+E+V +LN
Sbjct: 184 FTT-VEFDSDTILTRLRDLAFLNPNVTI----EFIDERNNIHRTLHYSGGLKEFVSYLNR 238
Query: 304 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+K LH+VV V + + +A Q+ +D+ ++ ++ + N+I+T+DGGTH+ G K + TR
Sbjct: 239 GEKTLHEVVYIEGSVQDVQVQVAFQY-TDSDTEEIISFVNNIKTVDGGTHVTGFKTAFTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV-RVPNPEFEGQTKTRLGNPEVRKVVD 422
+N LGKK +K + GE +REG+T +I+V + P+FEGQTK++LGN EV+ V
Sbjct: 298 VVNELGKKKNMIKGE--PFRGEDLREGMTAVIAVLMMGTPQFEGQTKSKLGNEEVQDAVA 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ V++ LT+Y E++ VL I+ K+ +A AAKRAR+ V++KS L +S+LPGKLADC
Sbjct: 356 KVVRDKLTDYFEVNESVLKVIIQKAQQTREAREAAKRAREAVKRKSSLGASTLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ EESE+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ +E + KNE+I+++
Sbjct: 416 ITKNLEESELFIVEGDSAGGSAKQARDRNFQAILPLRGKILNVEKSNELKLLKNEQIRDI 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G G++F + LRY KIII+TDADVDGAHIRTLLL FYRY + L + G IYV
Sbjct: 476 ITAIGTGT-GDNFDESKLRYGKIIIMTDADVDGAHIRTLLLALFYRYMRPLLENGRIYVA 534
Query: 603 VPPLYKVE-RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
+PPLYK+ G++ Y Y D ELK +S + Y IQR+KGLGEM P QLWETT+NP+
Sbjct: 535 MPPLYKLTVSGEKPVYLYSDEELKAKLASI-NGKRYEIQRYKGLGEMNPEQLWETTMNPK 593
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R + ++ IEDA EA+ +F LMG + R+ I A ++L LD+
Sbjct: 594 TRKIIRITIEDAEEADNLFEILMGKDAEERRGYIMRHARQLSLVDLDV 641
>gi|399889393|ref|ZP_10775270.1| DNA gyrase subunit B [Clostridium arbusti SL206]
Length = 636
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/647 (50%), Positives = 448/647 (69%), Gaps = 31/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA G+ NI +
Sbjct: 5 NEVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALGGFCENISIT 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS+ P+ +H NK +E ++TVLHAGGKFGGS GY VSGGLHGVG
Sbjct: 65 IHEDNSVSIVDDGRGMPVGIHHKMNKPTVEVIMTVLHAGGKFGGS--GYKVSGGLHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE+ EV V R+G + Q Y RG + + + GT+I F PD +F
Sbjct: 123 SVVNALSETCEVIVKREGHIWRQLYHRGNVASPFE----EIGDTEEHGTQINFKPDSDIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I+F ++T+A R+RELAFLN + I E D E + + + GG++ +V +LN +
Sbjct: 179 E-EIEFSYDTLAQRLRELAFLNKGIKINFIDERHDKE----DTFHYEGGIKSFVSYLNRN 233
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+P+ + G++ D +++ALQ+ +D Y++ + +AN+I T++GGTH+ G K++
Sbjct: 234 KEPVFPEPIYIEGYKDDY---AVEIALQY-NDGYAENLFSFANNIDTVEGGTHLAGFKSA 289
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR LN +K +K+ D +LSG+ +REGLT +IS+++ NP+FEGQTKT+LGN EVR +
Sbjct: 290 LTRALNDYARKFNFIKENDKNLSGDDIREGLTAVISIKLSNPQFEGQTKTKLGNSEVRGI 349
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD + E ++ +LE +P V I+ KSL A +A AAK+AR+L R+KSVL +++LPGKLA
Sbjct: 350 VDNILGEKVSAFLEENPQVGKLIIDKSLLAARARDAAKKARELTRRKSVLETTALPGKLA 409
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + +E I+
Sbjct: 410 DCSSKDPAECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRIDKILNSEMIR 469
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I A G G+ +DF E +RYH+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y
Sbjct: 470 AMITAFGAGIS-KDFNIEKIRYHRIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVY 528
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYKV +GK+ YCY + EL + SIQR+KGLGEM QLWETT++
Sbjct: 529 IAQPPLYKVSKGKKEIYCYLEDELDNALEEIGGKDNNTSIQRYKGLGEMNAEQLWETTMD 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
PE+R+L + +EDA A+ +F+ LMG +V+ R+E I QNA N+VNLD
Sbjct: 589 PERRILLKATVEDAMAADEIFTILMGDKVEPRREFIQQNAKNVVNLD 635
>gi|392391698|ref|YP_006428300.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
gi|390522776|gb|AFL98506.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
Length = 644
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 331/649 (51%), Positives = 447/649 (68%), Gaps = 23/649 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
K+ + Y + QI+VLEGLEAVRKRP MYIGST PRGLHHLVYEI+DN++DEA AGY
Sbjct: 7 IKDTIPTNDYNAGQIEVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEIVDNSIDEALAGYC 66
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
IEV + DNSI P+D+HP K A+E LTVLHAGGKF GS+ Y VSGG
Sbjct: 67 DTIEVTIHKDNSISVVDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKFSGSA--YKVSGG 124
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+SVVNALS L V V +DG YHQ++ RGK T L V+ +++ GT I F
Sbjct: 125 LHGVGMSVVNALSTWLHVEVKKDGNIYHQEFMRGKTKTELA--VIGQIDQNQTGTTITFS 182
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
PD ++F + F +T+A R+REL+FLN K++I L E D ++ Y+ GG+ ++V
Sbjct: 183 PDPEIFEDTV-FHFDTLAHRLRELSFLNKKVSITLIDEREDKKE----VYYHTGGIYDFV 237
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
+++N K+ LH + + F + DG+ +++++Q+ +D Y + + YAN+I T +GGTH G
Sbjct: 238 KYINRSKEALHPEPIYFEAEKDGVQVEVSMQY-NDGYVENLFSYANNIHTHEGGTHESGF 296
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
KA+LTR N +K+ +K + +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN E+
Sbjct: 297 KAALTRVANEYARKNNILKANEANLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEI 356
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +VD E LT +LE +P ++ KS+ A +A AA++AR+L R+KS L S+LPG
Sbjct: 357 RSIVDSITGEGLTVFLEENPATGKKVIEKSIQASRAREAARKARELTRRKSALEVSALPG 416
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCS E E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N
Sbjct: 417 KLADCSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDRILSNA 476
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+ +I A+G G+ EDF E RYHK++I+TDADVDGAHIR LLLTFF+RY K L +
Sbjct: 477 EIRAMITAMGTGI-SEDFDIEKARYHKLVIMTDADVDGAHIRILLLTFFFRYMKPLIENN 535
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
+Y+ PPL+KV++GK + Y Y + EL K++ + + IQR+KGLGEM QLWETT
Sbjct: 536 YVYIAQPPLFKVKKGKDIHYVYSNEELAKLQDEIGRDRV-EIQRYKGLGEMNAEQLWETT 594
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++P +R + Q+ +EDA +A+ +F+ LMG V+ R+E IQ+ A V NLD
Sbjct: 595 MDPAKRTILQVTMEDAIKADELFTILMGDVVEPRREFIQDNAQYVRNLD 643
>gi|288554611|ref|YP_003426546.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
gi|288545771|gb|ADC49654.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
Length = 646
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 436/642 (67%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I+V +
Sbjct: 15 QSYDESQIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEAMAGHCDTIQVTI 74
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 75 EEDNSITVEDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 132
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V R+ Y+Q+Y RG P L + +++GT IRF PD ++FT
Sbjct: 133 VVNALSTKLEVEVHRENQVYYQEYHRGVPAADLAV----IGETEKRGTIIRFKPDPEIFT 188
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++++ +A R+RELAFLN LTI + + E+N+ + YF+ GG+ +V+ LN K
Sbjct: 189 ETTEYEYDILATRLRELAFLNKGLTITITDK---REENKSSTYFYEGGIASFVEHLNRSK 245
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LHD + + DG+ +++A+Q+ +D Y + +AN+I T +GGTH G K LTR
Sbjct: 246 EVLHDEPIHIEAEKDGLNVEVAVQY-NDGYVSNIYSFANNISTHEGGTHESGFKTGLTRV 304
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K K+ D +L+GE VREGLT IISV++P+P+FEGQTKT+LGN E R V D
Sbjct: 305 INDYARKHNLFKENDPNLTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTVTDSL 364
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E + ++ HP V I+ K L A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 365 FSEAFSRFMIEHPQVGKKIVEKGLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSS 424
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N EI+ +I
Sbjct: 425 KDATISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILANNEIRAIIT 484
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G+DF E RYHKIII+TDADVDGAHIRTL+LTFFYRY + L ++G IY+ P
Sbjct: 485 ALGTGI-GDDFDIEKARYHKIIIMTDADVDGAHIRTLILTFFYRYMRPLIEKGYIYIAQP 543
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV +G+ +QY Y+D EL ++ S + IQR+KGLGEM P QLWETT++PE R
Sbjct: 544 PLYKVTQGRDLQYAYNDKELDQIMSQYTERNKVGIQRYKGLGEMNPTQLWETTMDPEYRT 603
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ Q+ +EDA +A+ +F LMG RV+ R++ I +NA + NLD
Sbjct: 604 VLQVTLEDAMKADEIFEILMGDRVEPRRDFIHENAQYVKNLD 645
>gi|257789784|ref|YP_003180390.1| DNA gyrase subunit B [Eggerthella lenta DSM 2243]
gi|317489247|ref|ZP_07947764.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325832276|ref|ZP_08165275.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
gi|257473681|gb|ACV54001.1| DNA gyrase, B subunit [Eggerthella lenta DSM 2243]
gi|316911648|gb|EFV33240.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325486112|gb|EGC88566.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
Length = 648
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/649 (51%), Positives = 435/649 (67%), Gaps = 24/649 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AGY I+V +
Sbjct: 8 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGYCDEIKVWIHQ 67
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI PID HP +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 68 DNSISVDDNGRGIPIDKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +EV V ++G EY + GK L V P +K GT + FWPD ++FT
Sbjct: 126 NALSSRVEVQVRKEGKEYFIGFDHGKTSEKLR-EVGP--TKRGNGTTVSFWPDPEIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+D +T+A R RE+AFLN L I L E +D + E F +AGG+ ++V++LN K
Sbjct: 183 TVYDFDTLANRFREMAFLNKGLKIVLYDERVTDADGKPRTEVFQYAGGIVDFVKFLNEGK 242
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ L+ + F + D T+++A+QW + +++++ +AN+I T +GGTH++G K ++TRT+
Sbjct: 243 ETLNKPIYFEAENDDGTVEVAMQWSTSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRTI 302
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N + +K+KD +LSG+ REG I+SV++ +P+FEGQTKT+LGN E+R +V +V
Sbjct: 303 NEYARSKGILKEKDSNLSGDDTREGCAAIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAV 362
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L EYLE +P I+ K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS
Sbjct: 363 TQGLAEYLEENPTPAKRIIGKATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSK 422
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
TPE SE+FIVEGDSAGGSAKQ RDR+ QAILPLRGKILNVER ++ I +LI A
Sbjct: 423 TPENSELFIVEGDSAGGSAKQARDRKTQAILPLRGKILNVERAGLHRSLSSDTISSLITA 482
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G+DF + RYH+III+TDADVDGAHIR LLLTFFYRY L + G IY+ PP
Sbjct: 483 IGTNI-GDDFDADQSRYHRIIIMTDADVDGAHIRILLLTFFYRYMPELINRGYIYIAQPP 541
Query: 606 LY----KVERGKQVQ-YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
++ K R +++ Y YD++ L V + + + +QR+KGLGEM P QLWETT+ P
Sbjct: 542 IFGLKKKNSRSPKIERYIYDESSLGSVLAEYDDPNKFDVQRYKGLGEMDPDQLWETTMEP 601
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R L Q+ I+DAAEA V S LMG +V+ RKE IQ A V LDI
Sbjct: 602 ATRTLLQVSIDDAAEAERVVSDLMGDQVEPRKEFIQKHARDVRF--LDI 648
>gi|373456034|ref|ZP_09547845.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
gi|371934284|gb|EHO62082.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
Length = 649
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 338/641 (52%), Positives = 446/641 (69%), Gaps = 25/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AGY ++IEV L
Sbjct: 21 YGAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCTHIEVTLND 80
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP +H T K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV
Sbjct: 81 DGSCTVTDNGRGIPTGMH-ETGKPAMEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVV 137
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE ++V V R+G + K SRG +T H+ D GT + F PD Q+F
Sbjct: 138 NALSEWMKVVVRREGHFHEMKLSRGD----VTEHMRTYGETDETGTSVTFKPDIQIFKEG 193
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I FD+ T+ R+RELAFLN LTI L ++ D +Q + + +AGG+ E+VQ+LN + K
Sbjct: 194 IDFDYETLKIRMRELAFLNKGLTITL-TDNRDGATHQ-DVFHYAGGITEFVQFLN-EGKD 250
Query: 308 LHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L D V+ F + D + +D+A+Q+ + YS+ M + N I T++GG H+ G + +LTR L
Sbjct: 251 LVDPAVIAFEGEKDKVIVDIAMQYQT-GYSENMYTFVNDINTVEGGMHLAGFRTALTRVL 309
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +KS +K + +LSG+ VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ +VD V
Sbjct: 310 NDYARKSGILKQNEDNLSGDDVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKSIVDNIV 369
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L YLE HP +I+ K ++A +A AA+RAR+L R+K+ L SSLPGKLADC+
Sbjct: 370 SEGLKTYLEEHPQEARAIVEKGITASRAREAARRARELTRRKNALEVSSLPGKLADCTEK 429
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P+ +EI+IVEGDSAGGSAK GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A
Sbjct: 430 DPKFTEIYIVEGDSAGGSAKSGRDRRYQAILPLRGKILNVEKARLDRVLNSDAIRTMITA 489
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G GV GEDF LRY+KIII+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PP
Sbjct: 490 FGTGV-GEDFDITKLRYYKIIIMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAQPP 548
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY++ +G+Q Y YDD E K+ + +IQR+KGLGEM P QLW+TT+NPEQR++
Sbjct: 549 LYQIRKGRQKYYTYDDDEQNKMLDEIGRDGC-TIQRYKGLGEMDPEQLWDTTMNPEQRVM 607
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ + DA EA+ +F+ LMG +V+ R+ I ++A + NLD
Sbjct: 608 LKVELTDAIEADRLFTILMGDKVEPRRRFIEEHAKEVTNLD 648
>gi|83588881|ref|YP_428890.1| DNA gyrase subunit B [Moorella thermoacetica ATCC 39073]
gi|83571795|gb|ABC18347.1| DNA gyrase, B subunit [Moorella thermoacetica ATCC 39073]
Length = 634
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 335/650 (51%), Positives = 446/650 (68%), Gaps = 33/650 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ V Y + QIQ+LEGLEAVR+RP MYIG+TG RGLH LV+E++DN++DEA AG+ I
Sbjct: 2 DQVRNEYDASQIQILEGLEAVRRRPGMYIGNTGVRGLHQLVFELVDNSIDEALAGFCDRI 61
Query: 131 EVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + +ADN IP+D+H T A+E LT+LHAGGKFGG+ GY V+GGLHG
Sbjct: 62 EVTIHENGSLTVADNGRGIPVDIHEKTGLPAVEVALTILHAGGKFGGN--GYKVAGGLHG 119
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VGLSVVNALSE LE+ V R+G YHQ+Y RG+ V+ L + GT + F+PD
Sbjct: 120 VGLSVVNALSEWLEIKVKRNGKIYHQEYRRGQKVSELKV----IGKTKGTGTSVTFYPDG 175
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F + F I R++EL+FLN + I R E ++ E Y+ GGL ++V+ L
Sbjct: 176 EIFEDLV-FQDEIIGRRLQELSFLNRGVKIVFRDERNESETT----YYHTGGLIDFVRHL 230
Query: 302 NTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
N +K KPL+ F + D + ++A+Q+ +D Y++ +L YAN+I T++GG+H G
Sbjct: 231 NKNKTVLFNKPLY----FSGEKDDVQAEIAIQY-NDGYNELILSYANNIHTVEGGSHEIG 285
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N ++ +KD + +LSGE +REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 286 FKTALTRVINDYARRFNLLKDAEANLSGEDIREGLTAVISVKVLEPQFEGQTKTKLGNTE 345
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR +VD V E L+ YLE +P + I+ K+L+A +A AA++AR+L R+K+ L +SLP
Sbjct: 346 VRGIVDSLVAENLSAYLEENPTIGRRIVDKALNAFRAREAARKARELTRRKNALEITSLP 405
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADC+ P +E+F+VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N
Sbjct: 406 GKLADCTHKDPAMAELFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILNN 465
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EEI+ +I ALG G+ G+DF RYHK I++ DADVDG+HIRTLLLTFFYRY + L E
Sbjct: 466 EEIRTIITALGTGI-GDDFNINKARYHKTILMADADVDGSHIRTLLLTFFYRYMRPLITE 524
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYKV RGK +Y Y+DAEL+K + IQR+KGLGEM P QLWET
Sbjct: 525 GYIYIAQPPLYKVYRGKVERYLYNDAELEKFLKEHEGER-WEIQRYKGLGEMNPEQLWET 583
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
T+NPE R L Q+ +EDA EA+ +F+ LMG RV+ R+E IQ A+ V NLD
Sbjct: 584 TMNPESRTLLQVNLEDAMEADAIFNILMGDRVEPRREFIQQHAHEVRNLD 633
>gi|342216026|ref|ZP_08708673.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586916|gb|EGS30316.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 640
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 328/647 (50%), Positives = 449/647 (69%), Gaps = 29/647 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVL GLE VRKRP MYIGSTGP+GLHHLVYE++DN++DEA AG I++ L
Sbjct: 6 RNYSASDIQVLTGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSIDEALAGICDTIQIQL 65
Query: 135 LADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DN IP+++HP T KS +ETVLT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 66 EKDNWVSIIDNGSGIPVEIHPQTGKSTVETVLTILHAGGKF--NNGAYKVSGGLHGVGVS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDK 241
VVNALS+ L TV RDG Y Q++S+G +T L TC K+ GT+I F PD+
Sbjct: 124 VVNALSKHLIATVKRDGKIYQQEFSKGDTLTKLKEIGTC------GKEEHGTKISFCPDE 177
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++FT +F + +A R RE+AFLN + I + +K Y+ + GG++ +V++L
Sbjct: 178 EIFTETTEFSYEVLAKRFREMAFLNKGVKIVFEDQRETEKKETYH---YEGGIKSFVEFL 234
Query: 302 NTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N K P+H V + + V +GI++++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +++
Sbjct: 235 NKKKTPVHQEVIYMEQVKEGISVEVAMQY-TDSYSENILTFANNIHTEEGGTHLSGFRSA 293
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR++N G++ +K+K+ +LSGE VREG+T IISV++P P+FEGQTK +LGN E R +
Sbjct: 294 LTRSINEYGRQYNLIKEKEENLSGEDVREGITGIISVKLPQPQFEGQTKAKLGNSEARTI 353
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V E L +LE +P + +IL K+LSA +A AA++ARDL R++S+L S+ LPGKL
Sbjct: 354 VDAVVTENLETFLEENPKISKAILQKALSARRAREAARKARDLTRKRSILDSTVLPGKLQ 413
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DC + +EIF+VEGDSAGGSAK GRD QAILPLRGKI+NVE+ + ++EI+
Sbjct: 414 DCQLDDNKVTEIFLVEGDSAGGSAKGGRDHMTQAILPLRGKIMNVEKARLDRILNSDEIK 473
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I A G GV G +F E LRY KIII+TDADVDGAHI+TLLLTFF+RY + L + G +Y
Sbjct: 474 AMITAFGTGV-GSEFNIEKLRYGKIIIMTDADVDGAHIQTLLLTFFFRYLRPLIEGGHVY 532
Query: 601 VGVPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
V PPLY ++RG K ++YCY D ELK+V + Y I R+KGLGEM QLWETT+N
Sbjct: 533 VAQPPLYGIKRGSKVIRYCYSDDELKRVMDDLGRDNKYKIGRYKGLGEMNADQLWETTMN 592
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R+L ++ IEDA EA+ VF+ LMG+ V R+E IQ NA N+D
Sbjct: 593 PEHRILLRVGIEDAQEADEVFTMLMGSDVKPRREFIQENAVYAENID 639
>gi|220930856|ref|YP_002507764.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219992166|gb|ACL68769.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 642
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 343/655 (52%), Positives = 457/655 (69%), Gaps = 26/655 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A E+F N Y +E IQVLEGLEAVRKRP MYIGSTG GLHHLVYE++DN++DEA
Sbjct: 1 MAEESFLNN--KGNYEAEHIQVLEGLEAVRKRPGMYIGSTGMDGLHHLVYEVVDNSIDEA 58
Query: 123 QAGYASNIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
GY IEV + + DN IP+D HP K A+E VLTVLHAGGKFGG GY
Sbjct: 59 MQGYCDLIEVIIKPGNIITVKDNGRGIPVDPHPKLKKPAVEVVLTVLHAGGKFGGD--GY 116
Query: 174 SVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
VSGGLHGVG+SVVNALS+ LEV V WRDG YHQKY+RG PV L + G
Sbjct: 117 KVSGGLHGVGVSVVNALSKWLEVEVCWRDGKVYHQKYNRGIPVYDLKV----IGECSGTG 172
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 292
T I F PD+++F + F + +A R++ELAFLN + I LR D E+ + +EY F G
Sbjct: 173 TTISFKPDEEIFED-VNFKYKVLAQRLKELAFLNKGVRIILR--DEREEEARQDEYCFEG 229
Query: 293 GLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
GL +V++LN +K PL D + ++ D +++A+Q+ +D Y D++ +AN+I T +GG
Sbjct: 230 GLVSFVKYLNKNKNPLFDEPFYLEEKDENREVEIAIQY-NDGYVDSIFTFANNINTREGG 288
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
TH+ G K++LTRT+N + +K+ D +L+GE +REG+T IISVR+ +P+FEGQTKT+
Sbjct: 289 THLSGFKSALTRTVNDYARSKGILKENDENLTGEDIREGITAIISVRLTDPQFEGQTKTK 348
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN E+R VD ++ L +LE +P + I+ K+ SA +A AAK+AR+L R+K L
Sbjct: 349 LGNSEIRGFVDSALSSNLRTFLEENPKIGKIIVEKARSAARARKAAKKARELTRRKGALS 408
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
+++LPGKLADCSS E +EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+
Sbjct: 409 NTALPGKLADCSSRDTENTEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARLN 468
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+ NEEI+ LI A+G G+ G++F RY KIII+TDADVDGAHIRTLLLTFFYRY +
Sbjct: 469 KILNNEEIRALITAIGTGI-GDEFDINKARYGKIIIMTDADVDGAHIRTLLLTFFYRYMR 527
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 651
L + G IY+ PPLYKV++G++ +Y Y+D L+K+ + + + ++QR+KGLGEM P
Sbjct: 528 PLIENGMIYIAQPPLYKVKKGRREEYVYNDRGLQKLLNDIGRDKI-TLQRYKGLGEMNPD 586
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
QLWETT+NPE R++ ++ IEDA A+ F++LMG +V R+E IQ A+ V NLD
Sbjct: 587 QLWETTMNPENRIILKVKIEDAVVADETFTTLMGDKVQPRREFIQEHAHEVQNLD 641
>gi|452210943|ref|YP_007491057.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
gi|452100845|gb|AGF97785.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
Length = 634
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 341/642 (53%), Positives = 444/642 (69%), Gaps = 24/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ S I+V +
Sbjct: 5 QVYDASHIQVLEGLEAVRKRPSMYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEIDVTI 64
Query: 135 -------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+ DN IPID HP KSALE V+T+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPNGSVTVIDNGRGIPIDPHPVHKKSALEVVMTILHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V RDG +Y Q+Y RGKP V + + D GT+ F PD ++F
Sbjct: 123 VVNALSEWTEVEVSRDGKKYFQRYIRGKP----ESDVREIGTSDTTGTKTTFKPDTKIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T F ++ + R+RELAFLN L I L K+ PE Q + ++GG+ E+V++LN K
Sbjct: 179 TT-DFQYDILLNRLRELAFLNRGLIINL-KDLRSPE-GQAETFNYSGGIIEFVEYLNKKK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+PLH+ + F + D + +++A+Q+ ++ Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHEKPIYFERQRDDMVVEIAMQY-TNGYTENVYSFANNINTHEGGTHIIGFKTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N K +K K+ D L+G+ VREGLT IISV++ P+FEGQTKT+LGN EV+ +VD
Sbjct: 295 ANDYIKANKLSKE-DEKLTGDDVREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSL 353
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L EY E +P V + IL K+L A +A AAK+AR+L R+KSVL S+LPGKLADCS+
Sbjct: 354 VTDGLAEYFEENPKVANIILDKALLAQRAREAAKKARELTRRKSVLEVSTLPGKLADCSN 413
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI+IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ A + KN E+ +LI
Sbjct: 414 KNPAECEIYIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKSRLAKILKNNEVISLIT 473
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G GV EDF E RYHKIII+TDADVDGAHIRTLLLT F+RY + L D G +Y+ P
Sbjct: 474 AIGTGV-SEDFDLENARYHKIIIMTDADVDGAHIRTLLLTLFFRYMRHLIDAGYVYIAQP 532
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+++GK Y Y D EL + +IQR+KGLGEM P QLWETT++PE R
Sbjct: 533 PLYKIKKGKMDYYAYSDKELADKVKELGEKGV-AIQRYKGLGEMNPGQLWETTMDPESRT 591
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA A+ +F LMG V+ R+ I+ +A +V+LD
Sbjct: 592 LLQVTLEDAIRADEIFRILMGDEVEPRRNFIETHAKEVVDLD 633
>gi|260655480|ref|ZP_05860968.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
gi|260629928|gb|EEX48122.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
Length = 640
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/646 (51%), Positives = 448/646 (69%), Gaps = 34/646 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG I VLEGLEAVR+RP MYIG T RGLHH VYEI+DN+VDE+ AGY +I V +
Sbjct: 12 SYGESGIVVLEGLEAVRRRPGMYIGDTTVRGLHHCVYEIVDNSVDESLAGYCGHITVTIG 71
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D S IP+++H T KS +ETVLTVLHAGGKF S Y VSGGLHGVG+SV
Sbjct: 72 TDESVSVTDDGRGIPVEIHHQTGKSTVETVLTVLHAGGKFDNRS--YKVSGGLHGVGVSV 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEVTVWRDG EY Q+Y RG PV L LP R+GTR+RF D Q+F
Sbjct: 130 VNALSEWLEVTVWRDGYEYFQRYERGIPVAPL-AKTLP---STRRGTRVRFLADSQIFD- 184
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK- 305
+Q+ T+ R RE+AFL P LTI + D + + + GG+ E+V++LN D+
Sbjct: 185 EVQYSAETLVSRFREMAFLIPGLTITV----EDQREGKTWTFCEEGGIAEFVRYLNRDRV 240
Query: 306 ----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+PL V G R DG+++++A Q+ +D Y++ + +AN I T++GGTH+ G++++L
Sbjct: 241 VLFPEPLV-VSGER---DGVSVEMAFQY-TDDYNERLFSFANLIHTVEGGTHVAGLRSAL 295
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +++ +++KD +LSGE +REGLTC++SV++ NP+FEGQTKT+LGN V+ V
Sbjct: 296 TRAVNEGARRAGALREKDENLSGEDLREGLTCVVSVKLSNPQFEGQTKTKLGNGTVKGSV 355
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D + + L + + L I+ K++ A +A AAK+AR+LVR KS + SLPGKLAD
Sbjct: 356 DSVIYDGLLGHFDEDSSALKPIVDKAVKARQAREAAKKARELVR-KSAMSGLSLPGKLAD 414
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS EE E++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + ++EI+
Sbjct: 415 CSSKKAEECEVYIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKARLDKILSSKEIRV 474
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I+ALG G+ G++F LRYHKIII+TDADVDGAHI TLLLTFF+R+ K L +EG +Y+
Sbjct: 475 IIQALGCGI-GDEFDLSKLRYHKIIIMTDADVDGAHISTLLLTFFFRHMKELVEEGHVYL 533
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNP 660
VPPLY+V+ GK+V Y Y D +L+ + S+ ++QR+KGLGEM P QLWETT++P
Sbjct: 534 AVPPLYRVQSGKKVDYLYSDRQLRTLMDSYEVEGKSPAVQRYKGLGEMNPEQLWETTMDP 593
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R+LK++ ++DA A+ FS LMG +V+ R++ IQ A+ V NLD
Sbjct: 594 ATRLLKRIQVDDAIAADEYFSILMGDKVEPRRDFIQTHAHEVRNLD 639
>gi|312109156|ref|YP_003987472.1| DNA gyrase subunit beta [Geobacillus sp. Y4.1MC1]
gi|336233551|ref|YP_004586167.1| DNA gyrase subunit B [Geobacillus thermoglucosidasius C56-YS93]
gi|423718277|ref|ZP_17692459.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
gi|311214257|gb|ADP72861.1| DNA gyrase, B subunit [Geobacillus sp. Y4.1MC1]
gi|335360406|gb|AEH46086.1| DNA gyrase, B subunit [Geobacillus thermoglucosidasius C56-YS93]
gi|383367207|gb|EID44490.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
Length = 640
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 342/650 (52%), Positives = 443/650 (68%), Gaps = 28/650 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQKVEHTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V + D SI P+D+ + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 INVTIEKDGSITVTDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V RDG ++QKY RG P T L V DR GT + F PD
Sbjct: 122 GVGASVVNALSEELEVYVHRDGKIHYQKYQRGVPCTDLQV----VGETDRTGTTVHFKPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +FD+ T+A R+RELAFLN L I L ED E N+ NEY + GG++ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITL--EDKRVE-NRKNEYCYEGGIQSYVKH 234
Query: 301 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN ++ LH+ ++G R DGI +++A Q+ +D+YS + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIIGER---DGIYVEIAFQY-NDSYSSNIYSFVNNIHTHEGGTHESG 290
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N +K + KD D +L+GE VREGLT I+S++ P P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKDNDPNLTGEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSD 350
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N
Sbjct: 411 GKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSN 470
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
E++ +I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + +
Sbjct: 471 NEVRAIITALGTGI-GEDFDITKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMREFIER 529
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ PPLYK+E+ KQV+Y Y+D +L+K+ + P N +IQR+KGLGEM P QLWET
Sbjct: 530 GYVYIAQPPLYKIEQDKQVRYAYNDRQLEKILAELPENPKPTIQRYKGLGEMNPEQLWET 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T+NPE R L Q+ ++DA EA+ F LMG +V+ R++ I +NA + NLD
Sbjct: 590 TMNPETRTLLQVSLQDAIEADETFEILMGDKVEPRRQFIEENARYVKNLD 639
>gi|452974104|gb|EME73926.1| DNA gyrase subunit B [Bacillus sonorensis L12]
Length = 637
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 327/641 (51%), Positives = 442/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I V +
Sbjct: 6 NYDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVEIE 65
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 66 KDNSITVRDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L+VTV+RDG ++Q+Y RG P L + D GT F PD ++FT
Sbjct: 124 VNALSTELDVTVYRDGKVHYQEYERGVPKADLKV----IGDTDVTGTTTHFKPDPEIFTE 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN ++
Sbjct: 180 TTEYDYDTLATRVRELAFLTKGVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSRE 237
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ V DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 238 VIHEEPVYIEGSKDGITVEVALQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVI 296
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +++ K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 297 NDYARRNGVFKENDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARAITDALF 356
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 357 SEALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSK 416
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 417 DPTISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 476
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PP
Sbjct: 477 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPP 535
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYK+++GK+V+Y Y+D +L+++ P N +QR+KGLGEM QLWETT++P+ R L
Sbjct: 536 LYKIQQGKRVEYAYNDKQLEEILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPDTRTL 595
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ ++DA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 596 LQVTLKDAIDADETFEMLMGDKVEPRRNFIEENARYVKNLD 636
>gi|206900988|ref|YP_002251257.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
gi|206740091|gb|ACI19149.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
Length = 635
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 453/642 (70%), Gaps = 29/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
Y ++ IQ+LEG EAVR+RP MYIG TG RGLHHL++E++DN++DE AGY I V L
Sbjct: 9 YTADSIQILEGTEAVRRRPGMYIGDTGVRGLHHLIFELVDNSIDEVMAGYCDYILVELKK 68
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ADN IP+D+HP K ALE VLT LHAGGKF S+S Y +SGGLHGVGLSVV
Sbjct: 69 DGAVVVADNGRGIPVDIHPQAKKPALEVVLTTLHAGGKF--SNSIYKISGGLHGVGLSVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++Q Y RGKP+T LT D+ GT+I+F+PD ++F T
Sbjct: 127 NALSSKLEVEVMRDGKIFYQVYERGKPITPLTVK----GETDKTGTKIKFYPDPEIFETT 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD++ +A R+RELAFLNPK+TI LR E + + N + + GGL E++++L+ K+
Sbjct: 183 -KFDYDIVANRLRELAFLNPKVTIELRDERT----GRSNIFKYEGGLLEFIEYLSKGKEV 237
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + ++ + +++ +Q+ S Y + +L Y N+I TI+GGTH+ G + +LTR +N+
Sbjct: 238 LHEPIYMEREEGNLILEIVMQYNS-GYDELILSYVNNIHTIEGGTHVTGFRTALTRVVNN 296
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
+ K+ + SLSG+ VREGLT I+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E
Sbjct: 297 FARSWGLWKENE-SLSGDDVREGLTAIVSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEE 355
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
LTEY +PD I++K + A +A AA++AR+LVR+KS+L S+ LPGKLADCS P
Sbjct: 356 ELTEYFSKNPDTGKLIITKIIEAYRARQAARKARELVRRKSLLESTLLPGKLADCSEKDP 415
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE-AAMYKNEEIQNLIRAL 546
+ E+FIVEG+SAGGSAKQ RDRR+QAILPLRGKILNVE+ + +EEI+ +I +L
Sbjct: 416 AKCELFIVEGESAGGSAKQARDRRYQAILPLRGKILNVEKAQHLTKILSSEEIKAIIASL 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+DF LRYHKIII+TDADVDGAHIRTLLLTFFYR+ + L + G IY+ PPL
Sbjct: 476 GTGI-GQDFDLSKLRYHKIIIMTDADVDGAHIRTLLLTFFYRHFRPLIEGGYIYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAELKKVKS--SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
Y + +GK+ +Y Y + E +++ +P N IQR+KGLGEM P QL ETT++P++R+
Sbjct: 535 YLLRKGKEERYAYSEEEKEEILKEWGYPENVY--IQRYKGLGEMDPEQLRETTMDPQKRI 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ IEDA EA +FS LMG V+ R+ I+ A V NLD
Sbjct: 593 LLQVTIEDALEAERLFSILMGNNVEERRNFIEQKAKFVRNLD 634
>gi|289551838|ref|YP_003472742.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
gi|289181369|gb|ADC88614.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
Length = 640
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/642 (51%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVI 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ YHQ Y +G P L V D+ GT IRF D ++F
Sbjct: 125 SVVNALSEDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGETDKTGTVIRFKADSEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D++T+ RIRELAFLN ++I L+ E D E+ + + Y + GG++ YV+ +N +
Sbjct: 181 TETTVYDYDTLQKRIRELAFLNKGISITLKDERDDEEQRE-DTYHYEGGIKSYVELMNEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ + + D I I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHEEPIYIHQMKDDIEIEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G KSK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGTKSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
EY +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEYFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSHLEISSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIFIVEGDSAGGS K+GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SKNPDESEIFIVEGDSAGGSTKEGRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRQMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+ +GKQ Y ++D EL K+KS + I R+KGLGEM QLWETT+NP+ R
Sbjct: 538 PPLFKLTQGKQKYYVFNDKELDKLKSELSPTPKWQISRYKGLGEMNADQLWETTMNPDNR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ ++DA EA+ F LMG V+ R++ I++ A LD
Sbjct: 598 MMLQVRLDDAIEADKTFEMLMGDVVENRRQFIEDNAVYATLD 639
>gi|424845289|ref|ZP_18269900.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
gi|363986727|gb|EHM13557.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
Length = 640
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/646 (51%), Positives = 448/646 (69%), Gaps = 34/646 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG I VLEGLEAVR+RP MYIG T RGLHH VYEI+DN+VDEA AG+ +I V +
Sbjct: 12 SYGESGIVVLEGLEAVRRRPGMYIGDTTVRGLHHCVYEIVDNSVDEALAGHCGHITVTIG 71
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D S IP+++H T KS +ETVLTVLHAGGKF S Y VSGGLHGVG+SV
Sbjct: 72 TDESVSVTDDGRGIPVEIHHQTGKSTVETVLTVLHAGGKFDNRS--YKVSGGLHGVGVSV 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEVTVWRDG EY Q+Y RG PV L LP R+GTR+RF D Q+F
Sbjct: 130 VNALSEWLEVTVWRDGYEYFQRYERGIPVAPL-AKTLP---STRRGTRVRFLADSQIFD- 184
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK- 305
+Q+ T+ R RE+AFL P LTI + D + + + GG+ E+V++LN D+
Sbjct: 185 EVQYSAETLVSRFREMAFLIPGLTITV----EDQREGKTWTFCEEGGIAEFVRYLNRDRV 240
Query: 306 ----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+PL V G R DG+++++A Q+ +D Y++ + +AN I T++GGTH+ G++++L
Sbjct: 241 VLFPEPLV-VSGER---DGVSVEMAFQY-TDDYNERLFSFANLIHTVEGGTHVAGLRSAL 295
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +++ +++KD +LSGE +REGLTC++SV++ NP+FEGQTKT+LGN V+ V
Sbjct: 296 TRAVNEGARRAGALREKDENLSGEDLREGLTCVVSVKLSNPQFEGQTKTKLGNGTVKGSV 355
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D + + L + + L I+ K++ A +A AAK+AR+LVR KS + SLPGKLAD
Sbjct: 356 DSVIYDGLLGHFDEDSSALKPIVDKAVKARQAREAAKKARELVR-KSAMSGLSLPGKLAD 414
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS EE E++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + ++EI+
Sbjct: 415 CSSKKAEECEVYIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKARLDKILSSKEIRV 474
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I+ALG G+ G++F LRYHKIII+TDADVDGAHI TLLLTFF+R+ K L +EG +Y+
Sbjct: 475 IIQALGCGI-GDEFDLSKLRYHKIIIMTDADVDGAHISTLLLTFFFRHMKELVEEGHVYL 533
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNP 660
VPPLY+V+ GK+V Y Y D +L+ + S+ ++QR+KGLGEM P QLWETT++P
Sbjct: 534 AVPPLYRVQSGKKVDYLYSDRQLRTLMDSYEVEGKSPAVQRYKGLGEMNPEQLWETTMDP 593
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R+LK++ ++DA A+ FS LMG +V+ R++ IQ A+ V NLD
Sbjct: 594 ATRLLKRIQVDDAIAADEYFSILMGDKVEPRRDFIQTHAHEVRNLD 639
>gi|78043837|ref|YP_361487.1| DNA gyrase subunit B [Carboxydothermus hydrogenoformans Z-2901]
gi|77995952|gb|ABB14851.1| DNA gyrase, B subunit [Carboxydothermus hydrogenoformans Z-2901]
Length = 635
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/639 (51%), Positives = 459/639 (71%), Gaps = 24/639 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
YG+E+IQVL+GLE VRKRPAMYIGST +GLHHLVYE++DN++DEA AG+ + IEV +
Sbjct: 10 YGAEEIQVLKGLEGVRKRPAMYIGSTNEKGLHHLVYEVVDNSIDEALAGFCNRIEVIIHK 69
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ADN IP+D+HP K A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 70 DGSITVADNGRGIPVDIHPEVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV + RDG Y+QK+SRG+P+T L + GT I F PD ++F T
Sbjct: 128 NALSEWLEVRIKRDGNLYYQKFSRGEPITELKI----IGKSKSTGTIITFKPDAEIFET- 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++F+++T+A R+ EL++LN + I L+ D N+ + +GG+++Y+++LN +K+P
Sbjct: 183 VEFNYDTLAKRLLELSYLNKNVKIILK----DERINKEEIFEHSGGIKDYLKYLNKNKEP 238
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH ++ F K+ D + +++ALQ+C +++S+ +L + N+I T +GGTH G K +LTR +N
Sbjct: 239 LHKIIYFEKEKDEVVVEVALQYC-NSFSENILSFTNNINTTEGGTHEIGFKTALTRVIND 297
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
KK +K+ ++SL GE +REGLT IISV+VP+P+FEGQTKT+L N EVR +VD V +
Sbjct: 298 YAKKYNLIKENNLSLQGEDIREGLTAIISVKVPDPQFEGQTKTKLVNTEVRSIVDSIVSD 357
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
YL+ YLE +P V ++ ++ A +A AA++AR+L R+K+ L S++LPGKLADCS P
Sbjct: 358 YLSTYLEENPAVGKKLIENAIRAARAREAARKARELARRKTALESNTLPGKLADCSEKDP 417
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG
Sbjct: 418 SLCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKSRLDKILANEEIRAMITALG 477
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
GV +DF E RYH++II+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLY
Sbjct: 478 TGVD-KDFDIEKARYHRLIIMTDADVDGAHIRTLLLTFFYRYLRPLIENGYVYIAQPPLY 536
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
KV++GK +Y Y D EL++ + + +IQR+KGLGEM P QLWETT+NPE R + +
Sbjct: 537 KVKKGKLEKYLYSDDELERYLNEIGREGV-TIQRYKGLGEMDPEQLWETTMNPETRTILK 595
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ +EDAA+A+ +F+ LMG +V+ R+E I+ A LV NLD
Sbjct: 596 VTLEDAAKADEIFTILMGDKVEPRREFIEKNAKLVRNLD 634
>gi|392956558|ref|ZP_10322085.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
gi|391877540|gb|EIT86133.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
Length = 640
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 319/644 (49%), Positives = 440/644 (68%), Gaps = 22/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V + Y IQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN++DEA AGY I V
Sbjct: 7 VEQHYDESDIQVLEGLEAVRKRPGMYIGATNVKGLHHLVWEIVDNSIDEALAGYCDEITV 66
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 67 TVEKDNSITVTDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS ++VTV+RDG +HQKY RG PV+ L + +GT+I F PD ++
Sbjct: 125 ASVVNALSSEMDVTVYRDGHIHHQKYHRGVPVSDLEV----IGETTERGTKIHFVPDTEI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTI-ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
FT ++D T++ RIRELA+LN + I A+ + + +P K E+ + GG++ YV+ +N
Sbjct: 181 FTETTEYDFATLSQRIRELAYLNRGIKICAVDQREENPTKQ---EFHYEGGIKSYVEHIN 237
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
++ LH+ + + +GI++++ALQ+ +D+Y+ + +AN+I T +GGTH G K +LT
Sbjct: 238 RSREVLHEPIFIEGEKEGISLEIALQY-NDSYTSNIYSFANNISTHEGGTHESGFKTALT 296
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N G+K+ K D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + +
Sbjct: 297 RVINDYGRKNNYFKGSDTNLTGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITE 356
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E+ + ++ +PDV +L K + AL+A +AAK+AR+ R+KS L SSLPGKLADC
Sbjct: 357 SLFSEHFSSFMLENPDVAKRVLEKGMMALRARVAAKKAREFTRRKSALEVSSLPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N EI+ +
Sbjct: 417 SSKDASVSELYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEIRAI 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G+ GEDF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G +Y+
Sbjct: 477 ITALGTGI-GEDFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRPIIEHGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV++GK+++Y YDD E+ ++ P +QR+KGLGEM P QLWETT++P+
Sbjct: 536 QPPLYKVQQGKRIEYAYDDKEMDRIMKELPQQPKPGVQRYKGLGEMNPTQLWETTMDPQT 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L Q+ ++DA +A+ F LMG +V+ R++ IQ A V NLD
Sbjct: 596 RTLLQVELKDAMDADETFEILMGDKVEPRRDFIQEHAQYVENLD 639
>gi|315659991|ref|ZP_07912849.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|385782961|ref|YP_005759134.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|418415558|ref|ZP_12988763.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635480|ref|ZP_13197855.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|315494892|gb|EFU83229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|339893217|emb|CCB52398.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|374841747|gb|EHS05203.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|410875014|gb|EKS22944.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 644
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/642 (51%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ YHQ Y +G P L V D+ GT IRF D ++F
Sbjct: 129 SVVNALSEDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGETDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D++T+ RIRELAFLN ++I L+ E D E+ + + Y + GG++ YV+ +N +
Sbjct: 185 TETTVYDYDTLQKRIRELAFLNKGISITLKDERDDEEQRE-DTYHYEGGIKSYVELMNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ + + D I I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHEEPIYIHQMKDDIEIEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G KSK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGTKSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
EY +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEYFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSHLEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIFIVEGDSAGGS K+GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFIVEGDSAGGSTKEGRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+ +GKQ Y ++D EL K+KS + I R+KGLGEM QLWETT+NP+ R
Sbjct: 542 PPLFKLTQGKQKYYVFNDKELDKLKSELSPTPKWQISRYKGLGEMNADQLWETTMNPDNR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ ++DA EA+ F LMG V+ R++ I++ A LD
Sbjct: 602 MMLQVRLDDAIEADKTFEMLMGDVVENRRQFIEDNAVYATLD 643
>gi|421858603|ref|ZP_16290868.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
gi|410831899|dbj|GAC41305.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
Length = 636
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 333/641 (51%), Positives = 437/641 (68%), Gaps = 23/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSVRGLHHLVWEVVDNSIDEALAGYCTKIQVIVH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVIDNGRGIPVGIEQKMQRPAIEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSESL VTV RDG Y Q+Y RG P L + D GT IRF PD + FT
Sbjct: 125 VNALSESLIVTVKRDGHIYQQEYRRGVPQYDLKV----LGDTDETGTTIRFKPDAETFTD 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +D+ T+ RIRELAFLN + + L +D NQ + + GG+ E+V++LN +++
Sbjct: 181 TLVYDYETLISRIRELAFLNKGIEMVL----TDERTNQTEIFKYDGGIIEFVEYLNRNRE 236
Query: 307 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + D IT ++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 237 RMHEPPIYVEGQKDYITCEIALQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRII 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +KD +LSG+ VREGLT I+SV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NEYSRKMNLMKDNVSNLSGDDVREGLTAIVSVKIPEPQFEGQTKTKLGNSEVRSIVESLF 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L E+++ +P + ++ K L A +A AA+RAR+L R+KS L SSLPGKLADCSS
Sbjct: 356 AERLMEFMDENPAISRKVVEKGLQAARAREAARRARELTRRKSALEVSSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
+ E+FIVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ + N EI+ +I A
Sbjct: 416 DASQCELFIVEGDSAGGSAKQGRDRHFQAILPLKGKILNVEKSRLDKILSNAEIRAIITA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PP
Sbjct: 476 LGTGI-GEDFDLEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPP 534
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+K+ER K V+Y + ++ + F A ++QR+KGLGEM QLWETT++PE R +
Sbjct: 535 LFKIERNKVVRYADSEKMRDEIIAEFGEGAKVNVQRYKGLGEMNAEQLWETTMDPESRSM 594
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ EDA A+ VF +LMG V+ R++ IQ A V NLD
Sbjct: 595 LQVSFEDAKMADEVFDTLMGDNVEPRRDFIQRHAKFVKNLD 635
>gi|21228521|ref|NP_634443.1| DNA gyrase subunit B [Methanosarcina mazei Go1]
gi|20907008|gb|AAM32115.1| DNA gyrase, subunit B [Methanosarcina mazei Go1]
Length = 634
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 340/642 (52%), Positives = 443/642 (69%), Gaps = 24/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ S I+V +
Sbjct: 5 QVYDASHIQVLEGLEAVRKRPSMYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEIDVTI 64
Query: 135 -------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+ DN IPID HP KSALE V+T+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPNGSVTVIDNGRGIPIDPHPVHKKSALEVVMTILHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V RDG +Y Q+Y RGKP V + + D GT+ F PD ++F
Sbjct: 123 VVNALSEWTEVEVSRDGKKYFQRYIRGKP----ESDVREIGTSDTTGTKTTFKPDTKIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T F ++ + R+RELAFLN L I L K+ PE Q + ++GG+ E+V++LN K
Sbjct: 179 TT-DFQYDILLNRLRELAFLNRGLIINL-KDLRSPE-GQAETFNYSGGIIEFVEYLNKKK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+PLH+ + F + D + +++A+Q+ ++ Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHEKPIYFERQRDDMVVEIAMQY-TNGYTENVYSFANNINTHEGGTHIIGFKTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N K +K K+ D L+G+ VREGLT IISV++ P+FEGQTKT+LGN EV+ +VD
Sbjct: 295 ANDYIKANKLSKE-DEKLTGDDVREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSL 353
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L EY E +P V + IL K+L A +A AAK+AR+L R+KS L S+LPGKLADCS+
Sbjct: 354 VTDGLAEYFEENPKVANIILDKALLAQRAREAAKKARELTRRKSALEVSTLPGKLADCSN 413
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI+IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ A + KN E+ +LI
Sbjct: 414 KNPAECEIYIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKSRLAKILKNNEVISLIT 473
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G GV EDF E RYHKIII+TDADVDGAHIRTLLLT F+RY + L D G +Y+ P
Sbjct: 474 AIGTGV-SEDFDLENARYHKIIIMTDADVDGAHIRTLLLTLFFRYMRHLIDAGYVYIAQP 532
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+++GK Y Y D EL + +IQR+KGLGEM P QLWETT++PE R
Sbjct: 533 PLYKIKKGKMDYYAYSDKELADKLKELGEKGV-AIQRYKGLGEMNPGQLWETTMDPESRT 591
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA A+ +F LMG V+ R+ I+ +A +V+LD
Sbjct: 592 LLQVTLEDAIRADEIFRVLMGDEVEPRRNFIETHAKEVVDLD 633
>gi|210624032|ref|ZP_03294149.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
gi|210153239|gb|EEA84245.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
Length = 633
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 349/644 (54%), Positives = 447/644 (69%), Gaps = 23/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG S I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSKIYV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
A+ AD SI P+++HP T S LETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 AINADGSITVEDDGRGIPVEVHPKTGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE L V RDG Y Q+Y +G P T L V D GT I F PD +V
Sbjct: 119 VSVVNALSEWLVAEVHRDGKAYRQEYKKGNPQTKLEV----VGESDHTGTIISFMPDAEV 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I+F +T+ R+REL+FLN + I ED K +Y ++ + GGL EYV++LN
Sbjct: 175 FD-EIEFSFDTLEYRLRELSFLNKGIKIIF--EDKREGKEKYRDFHYTGGLVEYVKFLNK 231
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +H D+V K VD +++A+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHEDIVYIDKKVDDCLVEIAMQY-TDGYTENIYSFANNINTHEGGSHLAGFKAALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T+N K++ +KDKD +LSGE +REGLT ++SV++P+P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTINEYAKRNGALKDKDSNLSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNTFMRGIVD 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L +LE +P+ I+ K+L A +A AAKRAR+L R+KSVL S+SLPGKLADC
Sbjct: 351 GVTVEELGSFLEENPNTAKVIVDKALRAQRAREAAKRARELTRRKSVLESTSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++EI+N+
Sbjct: 411 SEKDPSKSEIFLVEGDSAGGSAKQGRDRNTQAILPLRGKILNVEKSRLDKILASDEIKNM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G DF E RYHKIII+TDADVDGAHIRTLLLTFF+RY + L +EG +Y
Sbjct: 471 ITAYGCGI-GNDFDLEKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIEEGYVYAA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV + K+ Y Y D EL + + + Y IQR+KGLGEM P QLW+TT+NPE
Sbjct: 530 QPPLYKVTKQKKEYYVYSDKELDDLLNEIGRDK-YDIQRYKGLGEMNPEQLWDTTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L Q+ IEDAA A+ +FS LMG +V R+E IQ NA + NLD
Sbjct: 589 RTLLQVTIEDAAIADEIFSMLMGDKVAPRREFIQENAKYVRNLD 632
>gi|15612569|ref|NP_240872.1| DNA gyrase subunit B [Bacillus halodurans C-125]
gi|4033396|sp|O50627.1|GYRB_BACHD RecName: Full=DNA gyrase subunit B
gi|2760177|dbj|BAA24187.1| B subunit of DNA gyrase [Bacillus sp.]
gi|5672652|dbj|BAA82690.1| gyrB [Bacillus halodurans]
gi|10172618|dbj|BAB03725.1| DNA gyrase subunit B [Bacillus halodurans C-125]
Length = 637
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 434/642 (67%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I V +
Sbjct: 6 QAYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEAMAGFCDEIGVVI 65
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 66 EEDNSITVTDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V R+G ++QK+ RG P L + + DR GT+I F PD +FT
Sbjct: 124 VVNALSTMLEVEVHREGKVHYQKFHRGVPAADLEV----IGTTDRTGTKIHFKPDGDIFT 179
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
F+++T+A R+RELAFLN L I + E+ + +E+ + GG+ +V+ LN +
Sbjct: 180 ETTVFEYDTLASRLRELAFLNKGLRIKITDM---REEEKSDEFHYEGGIASFVEHLNRTR 236
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + G+ +++A+Q+ +D ++ + +AN+I T +GGTH G K LTR
Sbjct: 237 ETLHETPIHIEGEKQGVYVEIAVQY-NDGFTSNIYSFANNINTHEGGTHESGFKTGLTRV 295
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K K+ D +L+GE VREGLT IISV++P+P+FEGQTKT+LGN E R + D
Sbjct: 296 INDYARKHNLFKESDPNLTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSL 355
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E+ + +L HP V ++ K L A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 356 FTEHFSRFLIEHPQVARKLVDKGLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSS 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 416 RDASISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILANNEIRAIIT 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G+DF E RYHKIII+TDADVDGAHIRTL+LTFFYRY + L + G +Y+ P
Sbjct: 476 ALGTGI-GDDFDIEKARYHKIIIMTDADVDGAHIRTLILTFFYRYMRPLIEHGYVYIAQP 534
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV++GK +QY Y DAEL+++ S P A IQR+KGLGEM P QLWETT++P QR
Sbjct: 535 PLYKVQQGKDIQYAYGDAELQEILSQLPDKAKPGIQRYKGLGEMNPSQLWETTMDPGQRT 594
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA +A+ +F LMG RV+ R++ IQ NA + NLD
Sbjct: 595 VLQVTLEDAMKADEIFEILMGDRVEPRRDFIQENARYVKNLD 636
>gi|20806552|ref|NP_621723.1| DNA gyrase subunit B [Thermoanaerobacter tengcongensis MB4]
gi|20514990|gb|AAM23327.1| DNA gyrase (topoisomerase II) B subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 654
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 334/643 (51%), Positives = 449/643 (69%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 26 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 85
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 86 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 143
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G + Q Y RG P T L + + GT I F PDK++F
Sbjct: 144 VVNALSERLEVIVKQRGKVFRQVYERGVPKTPLEV----IGETEETGTIITFKPDKEIFE 199
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I FD++ +A R+RELAFLN + I L E D ++ +N + GGL +V++LN +K
Sbjct: 200 -EIVFDYDILAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGLIAFVKYLNRNK 254
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 255 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDSYNENIYSFANNIDTKEGGTHLIGFKSALTK 312
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK +KD + +L GE VREGLT I+SV++ NP+FEGQTKTRLGNPE+R +V+
Sbjct: 313 VINDYAKKYGMIKDGEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTRLGNPEMRSIVEG 372
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ YLE +P V I+ K+L A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 373 VVTEKLSAYLEENPSVARIIVEKALQAARAREAARKARELTRRKSALENTALPGKLADCS 432
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+FIVEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ ++ NEEI+++I
Sbjct: 433 EKDPSKCELFIVEGDSAGGSAKAGRNSRFQAILPLRGKILNVEKARLDKIFSNEEIRSII 492
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ GEDF LRYHK+II+TDADVDG+HIRTLLLTFF+R+ K L + G IY+
Sbjct: 493 TALGTGI-GEDFDISKLRYHKVIIMTDADVDGSHIRTLLLTFFFRFMKPLIENGHIYIAQ 551
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL K+ S + +QR+KGLGEM QLWETT++PE+R
Sbjct: 552 PPLYKITKGKKVYYAYSDRELDKILSEIGRENIV-VQRYKGLGEMNADQLWETTMDPEKR 610
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 611 TMLKVTLEDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 653
>gi|410582430|ref|ZP_11319536.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
gi|410505250|gb|EKP94759.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
Length = 635
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 440/642 (68%), Gaps = 31/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVR+RP MYIGSTGPRGLHHL++E++DNAVDEA AG + I V L A
Sbjct: 6 YDESQIQVLEGLEAVRRRPGMYIGSTGPRGLHHLIWEVVDNAVDEALAGRCTAITVTLHA 65
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ +HP K +E VLT+LHAGGKF G + Y VSGGLHGVG+SVV
Sbjct: 66 DGSCSVRDNGGGIPVGIHPKVGKPTVEVVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V R+G + Q+Y RG+P T L V+ + D GT +RF PD ++F
Sbjct: 124 NALSEWLEVEVRREGRIHRQRYRRGQPETGL--EVVGTTAADDTGTYVRFKPDPEIFEET 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F ++ + GR+RE+A LN L I LR E + + N + F GGL +V LN K+
Sbjct: 182 -EFKYDVVVGRLREIALLNSGLYIELRDERT----GERNLFQFMGGLRSFVALLNRTKEA 236
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH + + ++ + DG+ +++ALQW + +Y +T+ +AN+I T +GGTH G K +LTR +N
Sbjct: 237 LHPEPISYKAERDGVEVEMALQWTT-SYVETLYSFANTIHTHEGGTHEAGFKMALTRVVN 295
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K+ +K+ D +L+G+ +REGLT ++SV++P P+FEGQTKT+LGN EVR VVD
Sbjct: 296 DYARKANLLKNGDENLAGDDIREGLTAVLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTG 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L Y E +P V ++ K+++A++A AA++AR+L R+KS L ++LPGKL DC+
Sbjct: 356 EALATYFEENPQVARRVVEKAITAMRAREAARKARELTRRKSALEVTALPGKLTDCTVRD 415
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P +E+FIVEGDSAGGSAKQGRDRRFQA+LPLRGKILNVE+ + ++EI+ LI A+
Sbjct: 416 PAMAELFIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNVEKARLDKILAHDEIRALITAI 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F RYHKII++TDADVDGAHIRTLLLTFF+RY + L + G +Y+ PPL
Sbjct: 476 GTGI-GDEFDIHRARYHKIILMTDADVDGAHIRTLLLTFFFRYMRPLIEAGYVYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAEL----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
Y V +GK+ Y YDD +L ++V P+ QRFKGLGEM QLWETT+NPE
Sbjct: 535 YLVRQGKEEHYFYDDDQLEAFFRQVGKRMPA------QRFKGLGEMNAEQLWETTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
R L Q+ +EDA A+ +FS LMG+RV+ R+E I+ A V
Sbjct: 589 RTLLQVTLEDAMAADQIFSILMGSRVEPRREFIEQHARKVRF 630
>gi|125974861|ref|YP_001038771.1| DNA gyrase subunit B [Clostridium thermocellum ATCC 27405]
gi|256003883|ref|ZP_05428870.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281418684|ref|ZP_06249703.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|385777392|ref|YP_005686557.1| DNA gyrase subunit B [Clostridium thermocellum DSM 1313]
gi|419721172|ref|ZP_14248363.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
gi|419726568|ref|ZP_14253590.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|125715086|gb|ABN53578.1| DNA gyrase, B subunit [Clostridium thermocellum ATCC 27405]
gi|255992221|gb|EEU02316.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281407768|gb|EFB38027.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|316939072|gb|ADU73106.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 1313]
gi|380770165|gb|EIC04063.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|380782872|gb|EIC12479.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
Length = 641
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/646 (51%), Positives = 437/646 (67%), Gaps = 22/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N +SK Y IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ + I
Sbjct: 6 NEMSK-YDESNIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIMDNSIDEALAGFCNEI 64
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
+V + DNSI P+ +HP S +E V T+LHAGGKF G GY VSGGLHG
Sbjct: 65 KVIIHKDNSITNIDNGRGIPVGIHPKLGISTVEVVHTILHAGGKFDGQ--GYKVSGGLHG 122
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALSE LEV V+RDG Y Q+Y RGKPVT + + + GT+ F PD
Sbjct: 123 VGASVVNALSEFLEVEVFRDGHIYRQRYERGKPVTPVEI----IGDTNLTGTKTTFKPDP 178
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F +FD + R+RELAFLN L I LR D PE+ + GG+ +V+++
Sbjct: 179 EIFEVT-EFDFEVLLTRLRELAFLNKGLKIILR--DERPEEPVEKHLHYEGGIVSFVEYM 235
Query: 302 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ +K PLH+ + F DG +++A+Q+ D Y + + +AN+I T +GGTH+ G K ++
Sbjct: 236 DRNKDPLHEPIYFDGYKDGCYVEIAMQYNKDVYVENIHSFANNISTAEGGTHLTGFKTAI 295
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ LN KK +K+ D +L GE VREGLT +ISV++P+P+FEGQTKT+LGN EVR V
Sbjct: 296 TKVLNDYAKKFNFLKENDKNLLGEDVREGLTAVISVKIPDPQFEGQTKTKLGNSEVRSFV 355
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ + E +LE +P V IL K + + +A AA++AR+L R+K+VL +S+LPGKLAD
Sbjct: 356 ESIINEKFASFLEENPSVTRLILDKCIMSARAREAARKARELTRRKNVLETSTLPGKLAD 415
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C+ P EIFIVEGDSAGGSAKQGR+RRFQAILPL GK+LNVE+ +Y N+++
Sbjct: 416 CTERDPSLCEIFIVEGDSAGGSAKQGRNRRFQAILPLWGKMLNVEKARVDKVYGNDKLTP 475
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG + G+DF LRYHKIII+ DADVDGAHIRTLLLTFFYRY L G +Y+
Sbjct: 476 VIMALGTNI-GQDFDITKLRYHKIIIMADADVDGAHIRTLLLTFFYRYMTPLITNGYVYI 534
Query: 602 GVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYK+ +GK Y Y+D+EL+K ++ + +IQRFKGLGEM P QLW TT++P
Sbjct: 535 AQPPLYKITKGKTELYAYNDSELEKIIRENQWKKEECTIQRFKGLGEMNPEQLWTTTMDP 594
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
E R + ++ +EDA A+ +F+ LMG +V+ RKE IQ A LV NLD
Sbjct: 595 ETRTILRVELEDAIAADEIFTILMGDKVEPRKEFIQANAKLVTNLD 640
>gi|394994154|ref|ZP_10386883.1| DNA gyrase subunit B [Bacillus sp. 916]
gi|393805003|gb|EJD66393.1| DNA gyrase subunit B [Bacillus sp. 916]
Length = 638
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 438/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|385267030|ref|ZP_10045117.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
gi|385151526|gb|EIF15463.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
Length = 640
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 438/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTEYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 539 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 599 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 639
>gi|435851213|ref|YP_007312799.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
gi|433661843|gb|AGB49269.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
Length = 634
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 324/640 (50%), Positives = 440/640 (68%), Gaps = 24/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ + I+V + +
Sbjct: 7 YDATHIQVLEGLEAVRKRPSMYIGSTDNRGLHHLVYEVVDNSIDEALAGFCNQIDVIINS 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D +P NKSALE V+T+LHAGGKF SS Y VSGGLHGVG+SVV
Sbjct: 67 DGSLTVQDNGRGIPVDTYPKYNKSALEVVMTILHAGGKFDKSS--YKVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE EV V RDG Y+Q+Y +G P+ V + GT + F PDK + T
Sbjct: 125 NALSEWTEVYVKRDGNLYYQRYEKGVPI----ADVQVFGKSEGTGTTVTFKPDKSILETT 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F +T+ R+REL+FLN L I + + E+ + +Y GG+ +V+ LN +
Sbjct: 181 V-FIFDTLVTRLRELSFLNKGLKITISDRRTSEEEKEVFQY--EGGIISFVEHLNQKRNV 237
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH DV+ F ++ +G +++A+Q+ +D+Y++++ +AN+I T +GGTH+ G KA+LTR N
Sbjct: 238 LHKDVIYFEREKEGTIVEIAMQY-TDSYNESVYSFANNINTHEGGTHLVGFKAALTRVAN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
KK+ K D LSGE +REGLT II+V++ P+FEGQTKT+LGN +V+ +V+ V
Sbjct: 297 DYIKKNNLAKGDD-KLSGEDIREGLTAIINVKLTEPQFEGQTKTKLGNSDVKGIVESMVS 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L E++E +P V ++IL K+L A +A AAK+AR+L R+K+ L S+LPGKLADCS
Sbjct: 356 EGLAEFMEENPKVANAILQKALDAQRAREAAKKARELTRRKNALDISTLPGKLADCSEKD 415
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P + E+++VEGDSAGGSAKQGRDRRFQAILP RGKILNVE+ + + KN E+ +LI A+
Sbjct: 416 PSQCELYLVEGDSAGGSAKQGRDRRFQAILPFRGKILNVEKARLSRILKNTEVLSLITAM 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+D+ RYH++II+TDADVDGAHIRTL+LT F+RY + L DEG +Y+ PPL
Sbjct: 476 GTGI-GDDYDISRARYHRVIIMTDADVDGAHIRTLILTLFFRYMRPLIDEGYVYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y++++G+ Y Y D EL + +IQR+KGLGEM P QLWETT+NPE R +
Sbjct: 535 YRIKKGQAEHYVYSDRELNAKLKELGDKGI-NIQRYKGLGEMNPGQLWETTMNPETRTIL 593
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ +EDA A+ +FS LMG V+ RK I A LV NLD
Sbjct: 594 QVTLEDAVVADEMFSILMGDEVEPRKNFIMKNAKLVTNLD 633
>gi|154684524|ref|YP_001419685.1| DNA gyrase subunit B [Bacillus amyloliquefaciens FZB42]
gi|154350375|gb|ABS72454.1| GyrB [Bacillus amyloliquefaciens FZB42]
Length = 638
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 323/641 (50%), Positives = 438/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I +D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TIVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|387928232|ref|ZP_10130910.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
gi|387587818|gb|EIJ80140.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
Length = 640
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 337/642 (52%), Positives = 441/642 (68%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I V +
Sbjct: 9 QTYDANQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTEINVTI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E +LTVLHAGGKFGG S LHGVG S
Sbjct: 69 EKDNSITVVDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V RDG ++QKY RG P L + DR GT IRF PD ++FT
Sbjct: 127 VVNALSTELEVFVHRDGKIHYQKYERGVPCEDLKL----IGETDRTGTTIRFKPDGEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++FD+ T+A R+RELAFLN + I + ED E N+ NEY++ GG++ YV+ LN +
Sbjct: 183 ETLEFDYETLANRLRELAFLNRGIRITI--EDKRVE-NKRNEYYYEGGIKSYVEHLNRTR 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + DGIT+++ALQ+ +D +S + +AN+I T +GGTH G K +LTR
Sbjct: 240 EVLHEEPIYMEGEKDGITVEVALQY-NDGFSSNIYSFANNIHTYEGGTHESGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K K+ D +LSGE VREGLT I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 299 INDYARKHGIFKENDANLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAITDTI 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +L +P V I+ K L +A LAAK+AR+L R+K+ L SSLPGKLADCSS
Sbjct: 359 FAENFETFLLENPSVARKIVEKGLMGARARLAAKKARELTRRKNALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 419 KDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ P
Sbjct: 479 AVGTGI-GEDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRKILEAGYVYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV+ GK+++Y Y+D +L+++ S PS IQR+KGLGEM P QLWETT+NPE R
Sbjct: 538 PLYKVQHGKRIEYAYNDRQLEQILSELPSQPKPGIQRYKGLGEMNPEQLWETTMNPETRT 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ +EDA EA+ F LMG +V+ R++ I +NA + NLD
Sbjct: 598 LLQVSLEDAIEADETFEILMGDKVEPRRQFIEENAIYVKNLD 639
>gi|126179353|ref|YP_001047318.1| DNA gyrase, B subunit [Methanoculleus marisnigri JR1]
gi|125862147|gb|ABN57336.1| DNA gyrase subunit B [Methanoculleus marisnigri JR1]
Length = 656
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 338/665 (50%), Positives = 448/665 (67%), Gaps = 42/665 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY + I VLEGL VR+RPAMYIGST RGLHHLVYE++DNAVDEA AG+ I+V
Sbjct: 1 MTDTYDASHITVLEGLRPVRERPAMYIGSTESRGLHHLVYEVVDNAVDEALAGFCDLIQV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP+DL P KSALE VLTVLHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 TVNRDGSVSVDDNGRGIPVDLMPQYGKSALEIVLTVLHAGGKFDKNT--YQVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRG---KPVTTL--TCHVL--------------P 224
+SVVNALS L+ TV++DG Y ++ +G KP+ + T H + P
Sbjct: 119 VSVVNALSSWLDATVFKDGNVYAMQFRQGLVAKPLASRPETEHEMEARYEERYGARDGQP 178
Query: 225 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 284
+D + +GTRI F PD+ +F T ++FD++ + R+RELA+LN LTI LR D
Sbjct: 179 LDYERLRGTRITFQPDRSIFET-VEFDYDVLDHRLRELAYLNSGLTIVLR----DERTGD 233
Query: 285 YNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGY 341
Y F G+ ++V L K+ LHD + + + D + +++ALQ+ +++YS+T+ Y
Sbjct: 234 VVTYCFEDGIRQFVAHLGEGKESLHDDIIYFQKRDSESKVEVEVALQY-NNSYSETIYTY 292
Query: 342 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 401
NS+ T +GGTH+EG +++LTR +NS ++ +K+ D + GE VREGL C+IS RV N
Sbjct: 293 VNSVNTREGGTHLEGFRSALTRAINSAAHRNNLLKNNDAQVKGEDVREGLACVISTRVAN 352
Query: 402 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 461
P+FEGQTK RLGN VR +VD V LTEY E HP L +++ K+++A +A AA+ AR
Sbjct: 353 PQFEGQTKMRLGNSNVRGIVDSLVYSSLTEYFEEHPKTLQTVVDKAMAAARAREAARTAR 412
Query: 462 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 521
+L R+KS L S+ LPGKLADC P +SE++IVEGDSAGGSAKQGRDR+FQAILPLRGK
Sbjct: 413 ELARRKSTLESTGLPGKLADCQERDPAKSELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 472
Query: 522 ILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 581
ILNVE+ E + KN EIQ LI A+G GV G+ F E RYH+II++TDADVDGAHIRTL
Sbjct: 473 ILNVEKASEHKILKNAEIQALISAIGTGV-GDSFDAERARYHRIILMTDADVDGAHIRTL 531
Query: 582 LLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQR 641
LLTFFYRY L + G IY+ PPLY+V +G+Q QY Y + E++++ + + + SIQR
Sbjct: 532 LLTFFYRYMVGLVENGYIYIAQPPLYRVAKGRQEQYVYREEEMREILAEWGEKGV-SIQR 590
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
+KGLGEM QLW TT++P R+LKQ+ IEDAA AN +F LMG VD R++ I+ A
Sbjct: 591 YKGLGEMNAGQLWSTTMDPANRILKQVKIEDAAYANEIFEKLMGENVDARRDFIRRHAKE 650
Query: 702 V-NLD 705
V NLD
Sbjct: 651 VSNLD 655
>gi|147676340|ref|YP_001210555.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
gi|146272437|dbj|BAF58186.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
Length = 643
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/646 (53%), Positives = 451/646 (69%), Gaps = 25/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + YG+E+IQ+LEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+ I
Sbjct: 11 NNNNSKYGAEEIQILEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEAMAGFCDRI 70
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV L D S IP+D+HP T + A+E V+T+LHAGGKFGG S LHG
Sbjct: 71 EVILNEDGSATVIDNGRGIPVDIHPKTGRPAVEVVMTMLHAGGKFGGGGYKVSGG--LHG 128
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+SVVNALS LEV V RDG Y+Q+YSRG PVT L L GT++ F PD
Sbjct: 129 VGVSVVNALSLWLEVEVKRDGKVYYQRYSRGIPVTGL----LVKGKSSATGTKVTFMPDP 184
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F I F+ + +A R+REL+FLN + I L+ D Q + GG+ ++V++L
Sbjct: 185 EIFEDLI-FNQDILAQRLRELSFLNMGVKIILK----DRRSGQETVFQHDGGIMDFVRYL 239
Query: 302 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N K PLH + +K D + +++ALQ+ +D Y +++L YAN+I TIDGGTH G KA+
Sbjct: 240 NKSKTPLHGKPIYIQKQKDDVLVEVALQY-TDTYVESILSYANNINTIDGGTHEAGFKAA 298
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N G+K +K+ +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN EVR +
Sbjct: 299 LTRVINDYGRKYNLLKNGAGNLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEVRSI 358
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V E L +LE +P + IL K+++A +A AA++AR+L R+KS L S+LPGKLA
Sbjct: 359 VDSVVGEGLGIFLEENPSIARRILEKAVTASRAREAARKARELTRRKSALEGSTLPGKLA 418
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+
Sbjct: 419 DCSERDPSVSELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILANEEIR 478
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I ALG G+ GE+F RYHKII+++DADVDGAHIRTLLLTFFYRY + L ++G ++
Sbjct: 479 AMITALGTGI-GEEFDVSKARYHKIILMSDADVDGAHIRTLLLTFFYRYMRPLIEKGYVF 537
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLY+V++GK +Y Y DAEL+K+ + + SIQR+KGLGEM QLWETT++P
Sbjct: 538 IAQPPLYRVKKGKLEKYAYSDAELEKLLDQIGRDGV-SIQRYKGLGEMNAEQLWETTMDP 596
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
E R + Q+ +EDA EA+ VFS LMG RV+ R++ IQ A LV NLD
Sbjct: 597 ETRTVMQVNLEDAIEADAVFSMLMGDRVEPRRDFIQENARLVRNLD 642
>gi|415883916|ref|ZP_11545945.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
gi|387591711|gb|EIJ84028.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
Length = 640
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 337/642 (52%), Positives = 444/642 (69%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I V +
Sbjct: 9 QTYDANQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTEINVTI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E +LTVLHAGGKFGG S LHGVG S
Sbjct: 69 EKDNSITVVDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V RDG ++QKY RG P L + DR GT IRF PD ++FT
Sbjct: 127 VVNALSTELEVFVHRDGKIHYQKYERGVPCEDLKV----IGETDRTGTTIRFKPDGEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++FD+ T+A R+RELAFLN + I + ED E N+ NEY++ GG++ YV+ LN +
Sbjct: 183 ETLEFDYETLANRLRELAFLNRGIRITI--EDKRVE-NKRNEYYYEGGIKSYVEHLNRTR 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + DGIT+++ALQ+ +D ++ + +AN+I T +GGTH G K +LTR
Sbjct: 240 EVLHEEPIYMEGEKDGITVEVALQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +K+ D +LSGE VREGLT I+S++ P+P+FEGQTKT+LGN EVR V D
Sbjct: 299 INDYARKYGIIKENDANLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAVTDTI 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +L +P V I+ K L A +A LAAK+AR+L R+K+ L SSLPGKLADCSS
Sbjct: 359 FAENFETFLLENPSVARKIVEKGLMAARARLAAKKARELTRRKNALDVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 419 KDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ P
Sbjct: 479 AIGTGI-GEDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRKILEAGYVYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+++GK+++Y Y+D +L+++ S PS IQR+KGLGEM P QLWETT+NPE R
Sbjct: 538 PLYKIQQGKRIEYAYNDRQLEEILSELPSQPKPGIQRYKGLGEMNPEQLWETTMNPETRT 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ +EDA EA+ F LMG +V+ R++ I +NA + NLD
Sbjct: 598 LLQVSLEDAIEADETFEILMGDKVEPRRQFIEENAIYVKNLD 639
>gi|304315545|ref|YP_003850690.1| DNA gyrase subunit beta [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777047|gb|ADL67606.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 633
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 446/642 (69%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVVI 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ LEV V ++G Y QKY RG P + L + D GT I F PD ++F
Sbjct: 123 VVNALSKRLEVIVKQNGKVYEQKYERGVPKSDLKI----IGDTDETGTTITFAPDDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDILSQRLRELSFLNKGVRIRLMDERDGKE----DVFHYEGGIVEFVKYLNRNK 233
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + + D +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDSYTENIFSFANNIDTREGGTHLIGFKAALTKV 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKDNDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ E+++VEGDSAGGSAK GRD R+QAILPLRGKILNVE+ + ++EI+ +I
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSRYQAILPLRGKILNVEKARLDRILSSDEIKAMIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G DF LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ P
Sbjct: 473 ALGTGI-GSDFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+E+ K+V Y Y D EL + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 532 PLYKIEKNKKVYYAYSDKELDNILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPEKRT 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ ++DA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 591 MLKVSLDDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 632
>gi|421729501|ref|ZP_16168631.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451348605|ref|YP_007447236.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
gi|407076471|gb|EKE49454.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449852363|gb|AGF29355.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
Length = 638
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGETDKTGTITHFVPDPEIFKE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|281411537|ref|YP_003345616.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
gi|281372640|gb|ADA66202.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
Length = 636
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/650 (50%), Positives = 448/650 (68%), Gaps = 34/650 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDVLEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKV 232
Query: 308 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
HDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K
Sbjct: 233 FHDVIYMKRTEKVQTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKT 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTR +N GKK +K D S GE VREGLT ++SV V NPEFEGQTK++LGN EV++
Sbjct: 292 MLTRLMNEYGKKHGFLKGDD-SFQGEDVREGLTAVVSVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+++ +++ L + + +P+++ +ILSK +S +A AA+RAR++VR+K+VL++++LPGKL
Sbjct: 351 AINRVMRDELKKIFDANPELVKTILSKIMSTKQAREAARRAREMVRRKNVLQNTTLPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I
Sbjct: 411 ADCSSTDREKTELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDKLLKNEQI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++I A+G G+ G+DF + LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +
Sbjct: 471 SDIIVAVGTGI-GDDFDEGKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRV 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLY+++ GK+ Y Y D EL + K + IQR+KGLGEM P QLWETT+N
Sbjct: 530 YIALPPLYRIKAGKEEFYVYSDLELMEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMN 588
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
PE R + ++ IEDA EA+ +F LMG +R+E I+ A + + LDI
Sbjct: 589 PETRKIIRVTIEDAEEADRLFEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|365155917|ref|ZP_09352259.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
gi|363627842|gb|EHL78686.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
Length = 643
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 341/646 (52%), Positives = 442/646 (68%), Gaps = 27/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S++Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V
Sbjct: 10 SQSYDASQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEINVI 69
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 70 VEEDNSITVIDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LEV V RDG Y+QKY RG PV L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTELEVFVHRDGNIYYQKYRRGVPVEDLKT----IGHTDRTGTTVHFKPDPEIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T FD++ +A RIRELAFLN + I + ED + + NEY + GG++ YV LN
Sbjct: 184 TETTVFDYDVLATRIRELAFLNRNIKITI--EDRREGQKRKNEYHYEGGIKSYVAHLNRT 241
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+ LH+ V G + D I +++ALQ+ ++ +S + +AN+I T +GGTH G K +
Sbjct: 242 KEVLHEEPIYVEGLKDD---IQVEIALQY-NEGFSSNIYSFANNIHTYEGGTHESGFKTA 297
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N +K+ +KD D +LSGE VREGLT I+S++ PNP+FEGQTKT+LGN E R V
Sbjct: 298 LTRVINDYARKNGLIKDSDQNLSGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTV 357
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D E+ YL +P V I+ K L A +A LAAK+AR+L R+KS L SSLPGKLA
Sbjct: 358 TDALFSEHFETYLLENPSVARKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLA 417
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P SE+FIVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+
Sbjct: 418 DCSSRDPSISELFIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEIR 477
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I ALG G+ GE+F RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y
Sbjct: 478 MIITALGTGI-GEEFDISKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYVY 536
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYKV +GK+++Y Y+D +L ++ SS P + IQR+KGLGEM P QLWETT++P
Sbjct: 537 IAQPPLYKVSQGKRIEYAYNDRQLDEILSSLPESPKPGIQRYKGLGEMNPEQLWETTMDP 596
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
E+R + Q+ +EDA EA+ F LMG +V+ R++ I +NA ++ NLD
Sbjct: 597 EKRAMLQVSLEDAIEADETFEMLMGDKVEPRRQFIEENALHVKNLD 642
>gi|295694693|ref|YP_003587931.1| DNA gyrase subunit B [Kyrpidia tusciae DSM 2912]
gi|295410295|gb|ADG04787.1| DNA gyrase, B subunit [Kyrpidia tusciae DSM 2912]
Length = 635
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/641 (51%), Positives = 439/641 (68%), Gaps = 25/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIG+T RGLHHLV+E++DN++DEA AGY +I V +
Sbjct: 8 TYDESQIQVLEGLEAVRKRPGMYIGATSSRGLHHLVWEVVDNSIDEALAGYCDHIVVRVN 67
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+ HP K +E VLTVLHAGGKF G GY VSGGLHGVG+SV
Sbjct: 68 PDNSVTVIDNGRGIPVGTHPKLGKPTVEVVLTVLHAGGKFDGK--GYKVSGGLHGVGVSV 125
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV VWR+G Y Q+YSRG PVT L + DR GT++ F PD ++F
Sbjct: 126 VNALSEWLEVEVWREGSAYRQRYSRGVPVTPLER----LGPTDRTGTQVTFKPDPEIFED 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ F ++ + GR+RELAFLN +TI L D + E+ + GG+ +V++LN K+
Sbjct: 182 VV-FQYDILQGRLRELAFLNAGITIIL----EDARDGRRQEFAYQGGIRSFVEYLNRSKE 236
Query: 307 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
LH V + D + +++ALQ+ +D Y ++ +AN+I T +GGTH G K++LTR +
Sbjct: 237 VLHQPPVYIAAEKDDVMVEVALQY-NDGYVPSLYSFANNIHTHEGGTHESGFKSALTRVI 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ +KD D +++GE VREGLT IISV++P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 296 NDYARKNNLLKDSDSNVTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGIVESAF 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E +LE +P V I+ K ++A +A AA++AR+L R+K+ L SSLPGKL DCSS
Sbjct: 356 GERFVVFLEENPAVARKIVDKCITAARAREAARKARELTRRKNALEVSSLPGKLWDCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
ESE+++VEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N EI+ +I A
Sbjct: 416 DASESELYLVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARMDKILSNNEIRAIITA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G++ DF RYHK++I+TDADVDG+HIRTLLLTFFYRY + L + G +Y+ PP
Sbjct: 476 IGTGIE-PDFDISRARYHKVVIMTDADVDGSHIRTLLLTFFYRYMRPLIEAGYVYIAQPP 534
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY++++GK V+Y Y D E + + + IQR+KGLGEM QLWETT++PE R L
Sbjct: 535 LYRIQKGKVVRYAYSDQERDHIVGELKGD-VNDIQRYKGLGEMDAEQLWETTMDPESRTL 593
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ ++DA EA+ +FS LMG RV+ R+E I+ A+ V NLD
Sbjct: 594 LQVSMQDAIEADAIFSVLMGDRVEPRREFIEAHAHFVRNLD 634
>gi|375360696|ref|YP_005128735.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371566690|emb|CCF03540.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 640
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGETDKTGTITHFVPDPEIFKE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 539 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 599 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 639
>gi|384157618|ref|YP_005539691.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
gi|328551706|gb|AEB22198.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
Length = 638
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VIHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|387896530|ref|YP_006326826.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429503537|ref|YP_007184721.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|387170640|gb|AFJ60101.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429485127|gb|AFZ89051.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 638
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 478 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 537 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 597 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 637
>gi|374605476|ref|ZP_09678403.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
gi|374388927|gb|EHQ60322.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
Length = 636
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/641 (51%), Positives = 437/641 (68%), Gaps = 23/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSVRGLHHLVWEVVDNSIDEALAGYCTKIQVIVH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVIDNGRGIPVGIEQKMQRPAVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSESL VTV RDG + Q+Y RG P L + + GT IRF PD ++FT
Sbjct: 125 VNALSESLIVTVKRDGHIHQQEYRRGVPQYDLKV----LGDTEETGTTIRFKPDPEIFTD 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +DH T+ RIRELAFLN + + L +D +Q + + GG+ E+V++LN +++
Sbjct: 181 TLVYDHETLVSRIRELAFLNKGIEMVL----TDERNDQTETFKYDGGIIEFVEYLNRNRE 236
Query: 307 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + D IT ++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 237 KMHEPPIYVEGQKDYITCEIALQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRII 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +KD +LSG+ VREGLT I+SV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NEYARKMNLMKDNVSNLSGDDVREGLTAIVSVKIPEPQFEGQTKTKLGNSEVRSIVESLF 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L E+++ +P + ++ K L A +A AA+RAR+L R+KS L SSLPGKLADCSS
Sbjct: 356 AERLMEFMDENPAISRKVVEKGLQAARARDAARRARELTRRKSALEVSSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
+ E+FIVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ + N EI+ +I A
Sbjct: 416 DASQCELFIVEGDSAGGSAKQGRDRHFQAILPLKGKILNVEKSRLDKILSNAEIRAIITA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PP
Sbjct: 476 LGTGI-GEDFDLDKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRRLIEAGYVYIAQPP 534
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+K+ER K V+Y + ++ + F ++QR+KGLGEM QLWETT++PE R +
Sbjct: 535 LFKIERNKVVRYADSEKMRDEIIAEFGEGVKVNVQRYKGLGEMNAEQLWETTMDPESRSM 594
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ EDA A+ VF +LMG V+ R++ IQ A V NLD
Sbjct: 595 LQVSFEDAKMADEVFDTLMGDNVEPRRDFIQRHAKFVKNLD 635
>gi|254478916|ref|ZP_05092278.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
gi|214035138|gb|EEB75850.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
Length = 654
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 334/643 (51%), Positives = 448/643 (69%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 26 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 85
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 86 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 143
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G + Q Y RG P T L + + GT I F PDK++F
Sbjct: 144 VVNALSERLEVIVKQRGKVFRQVYERGVPKTPLEV----IGETEETGTIITFKPDKEIFE 199
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I FD++ +A R+RELAFLN + I L E D ++ +N + GGL +V++LN +K
Sbjct: 200 -EIVFDYDILAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGLIAFVKYLNRNK 254
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 255 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDSYNENIYSFANNIDTKEGGTHLIGFKSALTK 312
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK +KD + +L GE VREGLT I+SV++ NP+FEGQTKTRLGNPE+R +V+
Sbjct: 313 VINDYAKKYGMIKDGEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTRLGNPEMRSIVEG 372
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ YLE +P V I+ K+L A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 373 VVTEKLSAYLEENPSVARIIVEKALQAARAREAARKARELTRRKSALENTALPGKLADCS 432
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+FIVEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+++I
Sbjct: 433 EKDPSKCELFIVEGDSAGGSAKAGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRSII 492
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ GEDF LRYHK+II+TDADVDG+HIRTLLLTFF+R+ K L + G IY+
Sbjct: 493 TALGTGI-GEDFDISKLRYHKVIIMTDADVDGSHIRTLLLTFFFRFMKPLIENGHIYIAQ 551
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL K+ S + +QR+KGLGEM QLWETT++PE+R
Sbjct: 552 PPLYKITKGKKVYYAYSDRELDKILSEIGRENIV-VQRYKGLGEMNADQLWETTMDPEKR 610
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 611 TMLKVTLEDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 653
>gi|384263637|ref|YP_005419344.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452854068|ref|YP_007495751.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|380496990|emb|CCG48028.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452078328|emb|CCP20078.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 640
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 539 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 599 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 639
>gi|333895870|ref|YP_004469744.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111135|gb|AEF16072.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 633
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 447/642 (69%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVII 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS++LEV V ++G Y QKY RG P T LT + D GT I F PD ++F
Sbjct: 123 VVNALSKNLEVIVKQNGKVYQQKYERGVPKTDLTV----IGETDETGTTITFSPDGEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDVLSQRLRELSFLNKGVKIRLVDERDGKE----DVFHYEGGIVEFVKYLNRNK 233
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + + D +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G K +LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDSYTENIFSFANNIDTREGGTHLIGFKTALTKV 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +K+ D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKENDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ E+++VEGDSAGGSAK GRD ++QAILPLRGKILNVE+ + ++EI+ +I
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSKYQAILPLRGKILNVEKARLDRILSSDEIKAMIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G DF LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G IY+ P
Sbjct: 473 ALGTGI-GSDFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNIYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+E+ K+V Y Y D EL + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 532 PLYKIEKNKKVYYAYSDKELDNILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPEKRT 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ ++DA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 591 MLKVSLDDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 632
>gi|308171897|ref|YP_003918602.1| DNA gyrase subunit B [Bacillus amyloliquefaciens DSM 7]
gi|384162410|ref|YP_005543789.1| DNA gyrase subunit B [Bacillus amyloliquefaciens LL3]
gi|384166630|ref|YP_005548008.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
gi|307604761|emb|CBI41132.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens DSM 7]
gi|328909965|gb|AEB61561.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens LL3]
gi|341825909|gb|AEK87160.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
Length = 640
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 437/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VIHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PP
Sbjct: 480 LGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++GK+V+Y Y+D +L ++ P + +QR+KGLGEM QLWETT++P R L
Sbjct: 539 LYKVQQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA +A+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 599 LQVNLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLD 639
>gi|390933679|ref|YP_006391184.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569180|gb|AFK85585.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 633
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 445/642 (69%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVII 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ LEV V ++G Y QKY RG P T LT + D GT I F PD ++F
Sbjct: 123 VVNALSKKLEVIVKQNGKVYQQKYERGVPKTDLTV----IGETDETGTTITFSPDGEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDVLSQRLRELSFLNKGVKIRLVDERDGKE----DVFHYEGGVVEFVKYLNRNK 233
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + + D +++A+Q+ +D Y++ + +AN+I T +GGTH+ G K +LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDTYTENIFSFANNIDTREGGTHLIGFKTALTKV 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +K+ D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKENDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ E+++VEGDSAGGSAK GRD R+QAILPLRGKILNVE+ + ++EI+ +I
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSRYQAILPLRGKILNVEKARLDRILSSDEIKAMIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G DF LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G IY+ P
Sbjct: 473 ALGTGI-GSDFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNIYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+E+ K+V Y Y D EL + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 532 PLYKIEKNKKVYYAYSDKELDNILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPEKRT 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ ++DA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 591 MLKVSLDDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 632
>gi|448399828|ref|ZP_21571061.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
gi|445668281|gb|ELZ20911.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
Length = 643
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 318/638 (49%), Positives = 434/638 (68%), Gaps = 24/638 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V R+G + + G+PV + V ++ D GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRNGGVFRHAFEAGEPVGDME-RVRDMEPDDETGTEIRFWPDTGIFETG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----DSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F +T++ R+RELAFLN + I LR E D P Y + GG+ E+V++LN
Sbjct: 184 -EFAFSTLSNRLRELAFLNSGVRITLRDEREEKSDDGPVAETYE---YDGGIREFVEYLN 239
Query: 303 TDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ +HD V + D D I +++A+Q ++ ++ +AN+I T +GG+H+ G K +L
Sbjct: 240 ETRSAMHDDVIYFDDEDQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGSHLTGFKTAL 298
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRT+N ++ + D + +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V
Sbjct: 299 TRTVNDYANENDLLSDLEDNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIV 358
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ ++ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLAD
Sbjct: 359 ESAMHEGLGTYFEEHPDTAEAIVTKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLAD 418
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C + PEE+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N
Sbjct: 419 CQTKDPEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRN 478
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 479 MITAIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYA 537
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY++ + DAE ++ +QRFKGLGEM P QLWETT+NP+
Sbjct: 538 TQPPLYRIRYRGETYDAMTDAERDRIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPD 597
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 598 NRILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 635
>gi|403236812|ref|ZP_10915398.1| DNA gyrase subunit B [Bacillus sp. 10403023]
Length = 640
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V +
Sbjct: 9 QEYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVII 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E ++T+LHAGGKF G GY VSGGLHGVG S
Sbjct: 69 EEDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTILHAGGKFDGG--GYKVSGGLHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS SLEV V RDG ++ + RG VT L V D GT F PD ++FT
Sbjct: 127 VVNALSTSLEVYVHRDGKIHYIAFERGHVVTELKV----VGETDHTGTTTHFKPDGEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++D +T+A R+RELAFL + I + + E+N+ EY + GG++ YV+ LN K
Sbjct: 183 ETLEYDFDTLATRLRELAFLTRGVKITI---EDKREENKRREYHYEGGIKSYVEHLNRTK 239
Query: 306 KPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H+ F + +GI I++ALQ+ +D+Y+ + +AN+I T +GGTH G K +LTR
Sbjct: 240 EVIHEEPVFVEGEREGIAIEIALQY-NDSYTSNIYSFANNIHTYEGGTHESGFKTALTRI 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +++ KD D +LSG+ VREGLT IISV+ P+P+FEGQTKT+LGN E R V +
Sbjct: 299 INDYARRNNIFKDNDANLSGDDVREGLTAIISVKHPDPQFEGQTKTKLGNSEARTVTESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +L +P V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEKFEAFLLENPTVARKIVDKGTMAARARMAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++I
Sbjct: 419 KDPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNNEVRSMIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ GEDF RYHK++I+TDADVDGAHIRTLLLTFFYR+ + + + G +Y+ P
Sbjct: 479 ALGTGI-GEDFDISKARYHKVVIMTDADVDGAHIRTLLLTFFYRFMRQIIESGFVYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+++GK+++Y Y+D EL+K + PSN IQR+KGLGEM P QLWETT++P R
Sbjct: 538 PLYKIQQGKRIEYAYNDRELEKYLAELPSNPKPGIQRYKGLGEMNPEQLWETTMDPSNRT 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ Q+ ++DA +A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 598 MLQVTLQDAIDADETFEMLMGDKVEPRRNFIEENAQYVKNLD 639
>gi|433653751|ref|YP_007297459.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291940|gb|AGB17762.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 633
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 446/642 (69%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVII 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ LEV V ++G Y QKY RG P + L + D GT IRF PD ++F
Sbjct: 123 VVNALSKRLEVIVKQNGKVYEQKYERGVPKSELKI----IGDTDETGTMIRFKPDDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDVLSQRLRELSFLNKGVRIRLMDERDGKE----DVFHYEGGIVEFVKYLNRNK 233
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + + D +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDSYTENIFSFANNIDTREGGTHLIGFKAALTKV 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKDNDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ E+++VEGDSAGGSAK GRD R+QAILPLRGKILNVE+ + ++EI+ +I
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSRYQAILPLRGKILNVEKARLDRILSSDEIKAMIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G DF LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ P
Sbjct: 473 ALGTGI-GSDFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+E+ K+V Y Y D EL + Y++QR+KGLGEM QLW+TT++P +R
Sbjct: 532 PLYKIEKNKKVYYAYSDKELDNILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPGKRT 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ ++DA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 591 MLKVSLDDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 632
>gi|385799929|ref|YP_005836333.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309389293|gb|ADO77173.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 638
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 316/638 (49%), Positives = 437/638 (68%), Gaps = 22/638 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVL+GLEAVRKRP MYIGSTG +GLHHLV+E++DN++DE AG I+V
Sbjct: 7 NKDYNANQIQVLKGLEAVRKRPGMYIGSTGIKGLHHLVWEVVDNSIDEFLAGNGDQIKVT 66
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ I P D H T A++ VLT LHAGGKF SS Y VSGGLHGVG+
Sbjct: 67 IHQGEEITVEDFGRGIPADTHQETGLPAVQVVLTTLHAGGKFNNSS--YKVSGGLHGVGV 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LE+T +G +Y Q Y +G PV L + +R GT IRF PD ++F
Sbjct: 125 SVVNALSSELEITTHWEGHKYQQHYKKGAPVDKLK----KIGKTERSGTIIRFKPDSEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T A +F +A R++E A+LN +LT++LR D E+ E+ + GG++ +V++LN D
Sbjct: 181 T-AREFKFENLAHRLQESAYLNKELTLSLR--DERGEEVVEKEFQYDGGIKAFVEFLNKD 237
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ ++ D++ F D +++A+Q+ +D Y++ + YAN+I TIDGG H+ G K +LTR
Sbjct: 238 RNIINNDIIYFESKPDDYEVEIAVQY-NDGYNERIFSYANNINTIDGGYHLTGFKTALTR 296
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N+ K + + K SL+G+ VREG+T +I+V++P P+FEGQTKT+LGN E+R +V+
Sbjct: 297 AVNNFAKNNNKLPAKISSLNGKDVREGITAVINVKLPEPQFEGQTKTKLGNSEIRSIVES 356
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V +YL+ Y + +PD+ I+ K++ A++A A+K+AR+L ++K+ L S+SLPGKLADCS
Sbjct: 357 EVYQYLSLYFDTNPDLAKKIIDKAVQAVRARKASKKARELTKRKTALSSNSLPGKLADCS 416
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S EESE+FIVEGDSAGGSAKQGR+R+FQAILPL+GKILNVER + N E+ +I
Sbjct: 417 SKKSEESELFIVEGDSAGGSAKQGRERKFQAILPLKGKILNVERARLDKILNNNEVAAII 476
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ GEDF E LRYHKI+I+TDADVDGAHI TL+LT FYRY L + G IY+
Sbjct: 477 TALGAGI-GEDFNLEKLRYHKIVIMTDADVDGAHIATLILTLFYRYMPELIENGHIYLAK 535
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKV + K+ Y Y D L+ + N+ +S+QR+KGLGEM P QLW TT++P+ R
Sbjct: 536 PPLYKVTKRKKSHYLYSDQALETFRKE-NENSSFSLQRYKGLGEMNPEQLWATTMDPQNR 594
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
+L+++ I+D EA+ +F+ LMG+ RKE I N A L
Sbjct: 595 VLQKVEIDDKIEADDIFTRLMGSNASLRKEFIFNNAEL 632
>gi|402833234|ref|ZP_10881854.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
gi|402281226|gb|EJU29917.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
Length = 690
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/645 (51%), Positives = 445/645 (68%), Gaps = 27/645 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +I+V
Sbjct: 60 VDGDYGANQIQILEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDV 119
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + K A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 120 TIEKDNSITVVDNGRGIPVDMHE-SGKPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVG 176
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S++V V RDG + ++ +G LT + ++ GT++ F PD ++
Sbjct: 177 VSVVNALSTSMDVEVKRDGKIHSIRFEQGVTAAPLTV----IGETEKTGTKVHFVPDPEI 232
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT Q+ +T+ R+RELAFLN +TI L + + + Y F+ GG+ +V+ LN
Sbjct: 233 FTVT-QYSFDTLKHRLRELAFLNQGITIRLMDKRGEGREESY---FYEGGIRSFVEHLNR 288
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +H + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 289 KKEVIHPTPIYFNGIKDDTVVEIAMQY-NDSYMENIYSFVNNINTEEGGTHLAGFKIALT 347
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N +K +KDKD +LSGE VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 348 RAANDFARKQGILKDKDGNLSGEDVREGLTCVISLKIHEPQFEGQTKTKLGNSEVRGIVD 407
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P + ++ K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 408 SIVTEGLTEYFEENPAITKKVIEKAIMASRAREAARKARELTRRKNALEVSSLPGKLADC 467
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE++EI++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 468 SIKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 527
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ +DF RY KIII+TDADVDG+HIRTLLLTFFYRY K L + G +Y+
Sbjct: 528 ITAFGTGIS-DDFDIAKRRYGKIIIMTDADVDGSHIRTLLLTFFYRYMKPLIERGHVYIA 586
Query: 603 VPPLYKVERGKQVQYCYDDAEL-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY++ +GK+ Y Y D EL +K+ NA ++QR+KGLGEM P QLWETT++PE
Sbjct: 587 QPPLYQIRKGKKHWYTYSDDELAQKLNEVGRDNA--TVQRYKGLGEMNPEQLWETTMDPE 644
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ +EDA EA+ +F+ LMG +V+ R++ I+ A V NLD
Sbjct: 645 GRTMLQVRMEDAEEADELFTILMGDKVEPRRQFIEEHAKHVRNLD 689
>gi|410656647|ref|YP_006909018.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|410659625|ref|YP_006911996.1| DNA gyrase subunit B [Dehalobacter sp. CF]
gi|409019002|gb|AFV01033.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|409021981|gb|AFV04011.1| DNA gyrase subunit B [Dehalobacter sp. CF]
Length = 644
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 337/647 (52%), Positives = 449/647 (69%), Gaps = 27/647 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP S Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY I
Sbjct: 12 NPGSD-YNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEAMAGYCDEI 70
Query: 131 EVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + + DN IP+D+H K A+E LTVLHAGGKF ++ Y VSGGLHG
Sbjct: 71 EVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKF--NNEAYKVSGGLHG 128
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS-KDRQGTRIRFWPD 240
VG+SVVNALS +L V + +DG +Y Q+YSRGK +T L + + + R GT I F PD
Sbjct: 129 VGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELK----EIGTYQGRSGTMITFQPD 184
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++F I +D+ +A R++EL+FLN + I L E ++ K+ YN GL ++V++
Sbjct: 185 PEIFED-IVYDYEVLAHRLKELSFLNKNVMITLIDERNEA-KDVYNH---NNGLIDFVEY 239
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN +K P+H + F + D +++ALQ+ +++Y++T+ YAN+I T +GGTH G KA
Sbjct: 240 LNKNKDPIHQKAIVFETEKDNTKVEIALQY-NESYTETLFSYANNINTTEGGTHEAGFKA 298
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N +K+ +K + +LSGE VREGLT IISV++ P+FEGQTKT+LGN EVR
Sbjct: 299 ALTRVVNDYARKNNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRS 358
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LT + E +P V I+ K L A +A LAA++ARDL R+KS L S+SLPGKL
Sbjct: 359 IVDSVVGEGLTTFFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKL 418
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC+ P E++IVEGDSAGGSAKQGR+++FQAILPLRGKILNVE+ + N EI
Sbjct: 419 ADCTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQAILPLRGKILNVEKARLDRILGNTEI 478
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+ +I ALG G+ E+F E RYHK++I+TDADVDGAHIR LLLTFFYRY K L + +
Sbjct: 479 RAMITALGTGI-SEEFDIEKARYHKVVIMTDADVDGAHIRILLLTFFYRYMKPLIENHYV 537
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPL+KV+ GKQ+QY Y D EL KV + + IQR+KGLGEM P QLWETT++
Sbjct: 538 YIAQPPLFKVKNGKQIQYAYSDKELSKVMETVGRDKT-EIQRYKGLGEMNPEQLWETTMD 596
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R + Q+ ++DA A+ +F+ LMG +V+ RKE IQ +A ++ NLD
Sbjct: 597 PESRTILQVQMDDAMRADELFTMLMGDKVEPRKEFIQKHARDVRNLD 643
>gi|297616219|ref|YP_003701378.1| DNA gyrase subunit beta [Syntrophothermus lipocalidus DSM 12680]
gi|297144056|gb|ADI00813.1| DNA gyrase, B subunit [Syntrophothermus lipocalidus DSM 12680]
Length = 636
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 332/646 (51%), Positives = 446/646 (69%), Gaps = 25/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N Y + IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY I
Sbjct: 4 NGSKNEYTALDIQVLEGLEAVRKRPGMYIGSTDSRGLHHLVFEIVDNSIDEAVAGYCDEI 63
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
+V +L D++ IP+D+HP ALE +LT LH+G KFGGS GY++SGGLHG
Sbjct: 64 KVIILDDSTVTVTDNGRGIPVDMHPKMGIPALEVILTTLHSGAKFGGS--GYTISGGLHG 121
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VGLSVVNALS LEV V RDG YHQ+Y RGKPVT L + GT+I F PD
Sbjct: 122 VGLSVVNALSRWLEVEVARDGQLYHQRYERGKPVTPLAV----TGACQTTGTKITFSPDP 177
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F I F I R+REL++LN I L D + EY+ GG+ ++V++L
Sbjct: 178 EIFE-EICFSAEIIGQRLRELSYLNQGTRIVL----CDKRTGRDVEYYHTGGIRDFVKYL 232
Query: 302 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
+ +++PL + + FR +G +++A+Q+ + Y++T+L YAN+I T +GGTH G K
Sbjct: 233 SKNREPLSPEPIYFRIGKEGTVVEVAIQYNT-GYTETLLSYANNIHTQEGGTHELGFKNG 291
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N KK +K+ + +L GE +REG+T +ISV V +P+FEGQTKT+LGN +R +
Sbjct: 292 LTRVVNEYAKKQGMLKENEGNLLGEDIREGMTAVISVLVQDPQFEGQTKTKLGNAFIRSL 351
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ +V +++ + + +P + I+ K+++A +A AA++AR+L R+K++L S+SLPGKLA
Sbjct: 352 VEGAVSDFVGAFFDENPSLAKKIVEKAIAARRAREAARKARELTRRKNLLDSTSLPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + NEEI+
Sbjct: 412 DCSEKDPALSELYLVEGDSAGGSAKQGRDRNFQAILPLRGKILNVEKARLDKVLSNEEIR 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
LI A+G G+ GEDF RYH++II+TDADVDG+HIR LLLTFFYRY + L + G +Y
Sbjct: 472 ALITAIGTGI-GEDFDINKARYHRLIIMTDADVDGSHIRVLLLTFFYRYMRPLIEAGYVY 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
V PPLY+++RGK+V Y Y+D EL++ N Y ++R+KGLGEM P QLWETT+NP
Sbjct: 531 VAQPPLYELKRGKEVHYIYNDRELQRFLEQ-QGNKKYGVKRYKGLGEMNPEQLWETTMNP 589
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
E R L Q+ IEDA A+V+FSSLMG +V+ R+E IQ A LV NLD
Sbjct: 590 ENRTLLQVRIEDAIAADVIFSSLMGEKVEPRREFIQENARLVTNLD 635
>gi|126697571|ref|YP_001086468.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|254977347|ref|ZP_05273819.1| DNA gyrase subunit B [Clostridium difficile QCD-66c26]
gi|255094677|ref|ZP_05324155.1| DNA gyrase subunit B [Clostridium difficile CIP 107932]
gi|255102904|ref|ZP_05331881.1| DNA gyrase subunit B [Clostridium difficile QCD-63q42]
gi|255308724|ref|ZP_05352895.1| DNA gyrase subunit B [Clostridium difficile ATCC 43255]
gi|255316431|ref|ZP_05358014.1| DNA gyrase subunit B [Clostridium difficile QCD-76w55]
gi|255519091|ref|ZP_05386767.1| DNA gyrase subunit B [Clostridium difficile QCD-97b34]
gi|255652274|ref|ZP_05399176.1| DNA gyrase subunit B [Clostridium difficile QCD-37x79]
gi|260681774|ref|YP_003213059.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|306521988|ref|ZP_07408335.1| DNA gyrase, B subunit [Clostridium difficile QCD-32g58]
gi|384359324|ref|YP_006197176.1| DNA gyrase subunit B [Clostridium difficile BI1]
gi|423088743|ref|ZP_17077117.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
gi|115249008|emb|CAJ66819.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|260207937|emb|CBA60049.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|357559149|gb|EHJ40609.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
Length = 633
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 441/644 (68%), Gaps = 23/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGST PRGLHHLVYE++DN++DEA GY S+I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++ D S IP+++HP T KS LETVLT LHAGGKFGG S LHGVG
Sbjct: 61 SINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F PD+ +
Sbjct: 119 VSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESQDKGTMIQFMPDETI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+++LN
Sbjct: 175 FD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNK 231
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVD 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKLADC
Sbjct: 351 SVTVDELGSFLEENPSTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++EI+N+
Sbjct: 411 AEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFF+RY + L DEG +Y
Sbjct: 471 ITAYGCGI-GEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV + K+ Y Y D EL + N + +QR+KGLGEM QLWETT+NPE
Sbjct: 530 QPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGV-ELQRYKGLGEMNAEQLWETTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L Q+ +EDAA A+ VFS LMG +V RKE I+ A V NLD
Sbjct: 589 RTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLD 632
>gi|339443689|ref|YP_004709693.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
gi|338903441|dbj|BAK43292.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
Length = 647
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/649 (50%), Positives = 429/649 (66%), Gaps = 25/649 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY I V +
Sbjct: 8 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDQIGVWIHP 67
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI PID HP +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 68 DNSITVTDNGRGIPIDKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +EV V RDG EY + GK LT + GT+ FWPD ++FT
Sbjct: 126 NALSSRVEVFVKRDGSEYKITFDHGKTKEKLT----KIGPAKGTGTKTTFWPDPEIFTET 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+D++T+A R RE+AFLN L I L +D E E F +AGG+ ++V++LN K
Sbjct: 182 TVYDYDTLANRFREMAFLNKGLKITLHDARVTDEEGKPRTEVFQYAGGIVDFVKFLNEGK 241
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ L+ + F + T+++A+QW + +++++ +AN+I T +GGTH++G K ++TR++
Sbjct: 242 ETLNKPIYFEAENADGTVEVAMQWSTSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRSI 301
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N + +K+KD +LSG+ REGL I+SV++ +P+FEGQTKT+LGN E+R +V +V
Sbjct: 302 NEYARAKGILKEKDSNLSGDDTREGLAAIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAV 361
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L+EYLE +P I+ K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS
Sbjct: 362 TQGLSEYLEENPSPAKRIIGKATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSK 421
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
PE SEIFIVEGDSAGGSAKQ RDR+ QAILPLRGKILNVER ++ I +LI A
Sbjct: 422 EPENSEIFIVEGDSAGGSAKQARDRKTQAILPLRGKILNVERAGLHRSLSSDTISSLITA 481
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G+DF + RYH+III+TDADVDGAHIR LLLTFFYRY L + G IY+ PP
Sbjct: 482 IGTNI-GDDFDADQARYHRIIIMTDADVDGAHIRCLLLTFFYRYMPELINRGYIYIAQPP 540
Query: 606 LY----KVERGKQVQ-YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
++ K R +++ Y YD+ L + + + +QR+KGLGEM P QLWETT+ P
Sbjct: 541 IFGLKKKNSRSPKIERYIYDENALSSTLAEYDDPNKFDVQRYKGLGEMDPDQLWETTMEP 600
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R L Q+ I+DAAEA V S LMG V+ RKE IQ A V LDI
Sbjct: 601 ATRTLLQVNIDDAAEAERVVSELMGDLVEPRKEFIQKHARDVRF--LDI 647
>gi|298675298|ref|YP_003727048.1| DNA gyrase subunit B [Methanohalobium evestigatum Z-7303]
gi|298288286|gb|ADI74252.1| DNA gyrase, B subunit [Methanohalobium evestigatum Z-7303]
Length = 634
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 448/642 (69%), Gaps = 24/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y S IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY S I L
Sbjct: 5 QVYDSTNIQVLEGLEAVRKRPSMYIGSVDSRGLHHLVYEVVDNSIDEALAGYCSEINTIL 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+D S IP+D H NKSALE V+T+LHAGGKF +S Y VSGGLHGVG+S
Sbjct: 65 NSDGSVTLEDDGRGIPVDTHAKYNKSALEVVMTLLHAGGKFDKNS--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVN LSE L+V V RD Y+Q Y +G P T + + + GT+ F PD ++F
Sbjct: 123 VVNGLSEWLDVEVKRDDKRYYQHYEKGYPKTEVQV----LGESEGNGTKFTFKPDSEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +FD+++++ R+RELAFLN + I ++ E S E+ Q + + + GG+ +V+ LN ++
Sbjct: 179 ST-EFDYDSLSTRLRELAFLNKGIKITIKDERS--EEGQEDVFQYDGGIVSFVKHLNKNR 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
P+H+ + F + DG ++++LQ+ +D+Y + + +AN+I T +GGTH+ G K +LTR
Sbjct: 236 SPIHEEPIYFEGESDGTIVEISLQY-TDSYGEYVYSFANNINTHEGGTHVIGFKTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N +K++ ++ ++ L+GE +REGLT IIS ++P+P+FEGQTKTRLGN +V+ VV+
Sbjct: 295 ANDYIRKNE-IEKGNVRLTGEDIREGLTAIISAKIPDPQFEGQTKTRLGNSDVKGVVESL 353
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L+ YLE +P + +SI+ K+LSA +A AAKRAR+L R+KS L S+LPGKLADCS
Sbjct: 354 VTEELSRYLEENPKIANSIIKKALSAKRAREAAKRARELTRRKSALEVSTLPGKLADCSE 413
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
T P SEIF+VEGDSAGGSAK GRDRRFQAILP RGKI+NVE+ + + KN EI +LI
Sbjct: 414 TDPSVSEIFLVEGDSAGGSAKMGRDRRFQAILPFRGKIINVEKARLSKVLKNNEILSLIT 473
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ GEDF RYHK+II+TDADVDGAHIRTL+LTFF+RY + D G +Y+ P
Sbjct: 474 AMGTGI-GEDFDINKARYHKVIIMTDADVDGAHIRTLILTFFFRYMNEMVDNGYVYIAQP 532
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++++GK+ Y + + E K K SIQR+KGLGEM P QLW TT+NPE R
Sbjct: 533 PLYRIKKGKKEFYIHTEKE-KNAKLKELGEKGVSIQRYKGLGEMNPEQLWATTMNPESRK 591
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDAA A+ +FS LMG V+ R++ I+ +A +VNLD
Sbjct: 592 LTQVTMEDAAAADEMFSILMGEEVEPRRQFIEKHATEVVNLD 633
>gi|332980610|ref|YP_004462051.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
gi|332698288|gb|AEE95229.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
Length = 633
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/646 (51%), Positives = 449/646 (69%), Gaps = 31/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DE AG+ I++
Sbjct: 4 SGAYDASQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEVLAGFCDTIKII 63
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP T +SA+E LT+LHAG KFGG S LHGVG+
Sbjct: 64 IHKDNSITVEDNGRGIPVGIHPKTGRSAVEVALTMLHAGSKFGGGGYKVSGG--LHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L VTV ++G Y Q+Y RGKPVT L + D GT I F PD QVF
Sbjct: 122 SVVNALSEWLIVTVKQNGHIYRQRYERGKPVTDLEV----IGDTDETGTTISFKPDYQVF 177
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++++++T+ R RELAFLN ++TI L E D ++ E+ + GG+ +V++LN +
Sbjct: 178 E-ELEYNYDTLRNRFRELAFLNKEVTITLIDERDDKKE----EFHYEGGIVSFVEYLNKN 232
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K PLH + G R DV +++A+Q+ +D+Y +++ +AN+I T +GGTH+ G +++
Sbjct: 233 KSPLHKEAIYISGMRDDVQ---VEVAIQY-NDSYVESVYAFANNIETPEGGTHLSGFRSA 288
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
+T+ +N +K +K + SLSG+ VREGLT IISV++ +P+FEGQTK +LGN EVR +
Sbjct: 289 MTKVINDYARKLNMLKPNEPSLSGDDVREGLTAIISVKLSDPQFEGQTKEKLGNSEVRGI 348
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V + L+ Y E HP V I+ K++SA +A AA++AR+L R+KS L S S+PGKLA
Sbjct: 349 VDSIVSDGLSTYFEEHPSVTKIIIEKAISAFRAREAARKARELTRRKSALESVSMPGKLA 408
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P+ EIF+VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+
Sbjct: 409 DCSERDPKLCEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKTRLDRILSNEEIK 468
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I A G G+ GEDF LRY +II +TDADVDG+HIRTLLLTFFYRY + L + G +Y
Sbjct: 469 AMITAFGAGI-GEDFDISKLRYERIICMTDADVDGSHIRTLLLTFFYRYMRPLLENGNVY 527
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYKVE+GK+ Y Y D EL+++ + + + ++QR+KGLGEM PVQLW+TT++P
Sbjct: 528 IAQPPLYKVEKGKKEYYIYSDRELEQLLTRIGRDGI-TVQRYKGLGEMDPVQLWDTTMDP 586
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+R + ++ IEDA A+ +F+ LMG V+ R+E I + A+LV NLD
Sbjct: 587 AKRTMLKVSIEDAIAADEIFTILMGDNVEPRREFIASNAHLVKNLD 632
>gi|319893736|ref|YP_004150611.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|386318035|ref|YP_006014198.1| DNA gyrase subunit B [Staphylococcus pseudintermedius ED99]
gi|317163432|gb|ADV06975.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|323463206|gb|ADX75359.1| DNA gyrase, B subunit [Staphylococcus pseudintermedius ED99]
Length = 640
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 332/642 (51%), Positives = 430/642 (66%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV
Sbjct: 7 SENYGASQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE+LEV V RDG +HQ Y +G P L V D+ GT IRF D +F
Sbjct: 125 SVVNALSETLEVYVHRDGRIHHQAYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+++ T+ RIRELAFLN + I L E D E + + Y + GG++ YV+ +N +
Sbjct: 181 QETTVYNYETLQKRIRELAFLNKGIRITLTDE-RDEENVREDSYHYEGGIKSYVELINEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD V + D I +++ALQ+ S ++ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPLHDEPVYVHQTRDDIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN+ G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNNYGTQSKLIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 VFSELFERFLYEHPQVARIIVEKGIMASRARIAAKKAREVTRRKSALDISSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P ESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ ++
Sbjct: 419 SKDPSESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDKILNNNEIRQMV 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVFNDRELDKLKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ ++DA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 AMLQVTLDDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|162606284|ref|XP_001713657.1| DNA gyrase subunit B [Guillardia theta]
gi|13794577|gb|AAK39952.1|AF165818_160 DNA gyrase subunit B [Guillardia theta]
Length = 684
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/684 (48%), Positives = 458/684 (66%), Gaps = 24/684 (3%)
Query: 42 VSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGS 101
+S Q++ S +L + F++ + + Y + I VLEGLE VR+RP ++IGS
Sbjct: 9 LSQQIIQFSGRILSKKFITDINNKSSLNNANSNNNYNANNITVLEGLEPVRRRPGVFIGS 68
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS---------IPIDLHPATNKSA 152
TG +G HHLVYEI+DN+VDE+ AG+ ++V + +D S IP DLHP TNK+A
Sbjct: 69 TGLKGFHHLVYEIVDNSVDESMAGFCEKVDVIINSDKSVTIRDNGRGIPTDLHPITNKTA 128
Query: 153 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 212
LETVLT+LHAGGK GY VSGGLHGVG+SVVN LSE L + R+ + ++ RG
Sbjct: 129 LETVLTILHAGGK--FGGGGYKVSGGLHGVGVSVVNGLSEYLNINTQRNQRKIGMRFVRG 186
Query: 213 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 272
K ++ C++ GT I F PD Q+F + FD I GR+ ELAFLN L +
Sbjct: 187 KKISE--CNISSFKKNIINGTTINFKPDYQIFFSEFDFDSYVIGGRLNELAFLNSNLKLL 244
Query: 273 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 332
L ED + + + + GG+ EY+ + +KK LH+ + K + I++ W S+
Sbjct: 245 L--EDRRSKIIKSSLFLHDGGIMEYINEMTINKKRLHNPIILSKIFNNSQIEIGFVWSSE 302
Query: 333 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 392
Y + +L + N+IRT++GGTH++G K +T+ +N L KK K+K S+SGE +REGLT
Sbjct: 303 QYQENILSFVNNIRTVEGGTHVDGFKQGITKLVNLLSKKKIKSKEKLNSISGEFIREGLT 362
Query: 393 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEY-LTEYLELHPDVLDSILSKSLSAL 451
C+I+V+ PEFEGQ K++LGNP+++ +V+ ++E ++E + ++L+ +L K++SA+
Sbjct: 363 CLINVKTSEPEFEGQIKSKLGNPDIKFLVENLIKEEGEIHFIENNSNLLNIVLEKAISAM 422
Query: 452 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 511
A A+K+A++LVR+KS+L +LPGKL+DCS P+ SEIFIVEGDSAGGSAKQ RDRR
Sbjct: 423 NAYEASKKAKELVRKKSILEGITLPGKLSDCSEKNPQFSEIFIVEGDSAGGSAKQARDRR 482
Query: 512 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 571
FQAILPLRGKI+N+E+ DE +Y N EIQ+LI ALGLGV+G D LRYHKIII+TDA
Sbjct: 483 FQAILPLRGKIINIEKNDEKKIYNNTEIQSLISALGLGVRGNDEDLSNLRYHKIIIMTDA 542
Query: 572 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE------RGKQVQYCYDDAELK 625
DVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+E K QYCY + EL+
Sbjct: 543 DVDGAHIRTLLLTFFYRYQKELIDKGFVYIACPPLYKIENKKNKNLDKNTQYCYSEGELE 602
Query: 626 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 685
+ S N +IQRFKGLGEMMP QLW+TT++PE R+LK++ + DA A+ +F LMG
Sbjct: 603 YIIQSSHFNK--NIQRFKGLGEMMPEQLWKTTMSPEMRILKKIKLSDAKRADKIFEVLMG 660
Query: 686 ARVDTRKELIQNAANLVNLDHLDI 709
++V RK+ IQ A+L+ +D LDI
Sbjct: 661 SKVPERKKFIQIQASLIKIDSLDI 684
>gi|193215259|ref|YP_001996458.1| DNA gyrase subunit B [Chloroherpeton thalassium ATCC 35110]
gi|193088736|gb|ACF14011.1| DNA gyrase, B subunit [Chloroherpeton thalassium ATCC 35110]
Length = 644
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/650 (49%), Positives = 434/650 (66%), Gaps = 24/650 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E KE S YG+ IQVL+G+E VR+RPAMYIG G RGLHHLVYEI+DN+VDEA
Sbjct: 2 SEEVKEIEKSLEYGASNIQVLDGIEHVRRRPAMYIGDVGVRGLHHLVYEIVDNSVDEALG 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
GY I V + ++ SI P D+HP N SAL+ V+TV+ AGGKF Y V
Sbjct: 62 GYNDYIFVQIKSNGSILVRDKGRGIPTDIHPQKNTSALQLVMTVIGAGGKF--DKGAYKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG SVVNALSE EV V+R+G + Q Y +G P ++ + + GT+
Sbjct: 120 SGGLHGVGASVVNALSEWCEVEVYREGKIFFQGYEKGIPKAPVSV----IGTTSENGTKT 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD+ +F +F ++T+A R+RELA+LN LTI + D + +E+ F GG++
Sbjct: 176 TFLPDESIFKNR-EFRYDTLADRMRELAYLNKNLTIVI----EDERDGRRDEFHFKGGIQ 230
Query: 296 EYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
E+V ++++ + K + + + F + DG +++A Q+ +D+Y + Y N+I T +GGTH+
Sbjct: 231 EFVTFMDSTRLKLIKEPIYFEGEKDGTVVEIAFQY-NDSYQENAFSYVNNINTHEGGTHV 289
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G + +LTRTLN G+K+ K+ ISL+GE REGLT I+SV+VP P+FEGQTKT+LGN
Sbjct: 290 TGFRKALTRTLNYYGQKNDLFKNLKISLTGEDFREGLTAILSVKVPEPQFEGQTKTKLGN 349
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
E + +V+ V E L EY+E HP+ + IL K +SA A AA++A+DL R+KS L SSS
Sbjct: 350 SETQSIVESIVNEKLAEYIEQHPNEVKIILEKVVSAAIARDAARKAKDLTRRKSALESSS 409
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCS PE E++IVEGDSAGGSAKQGRDRRFQAILPL+GKILNVE+ M
Sbjct: 410 LPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRRFQAILPLKGKILNVEKARLNKML 469
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+NEEI+ LI ALG + ++F LRY KII++TDADVDGAHIRTLLLTFF+RY + L
Sbjct: 470 ENEEIRTLIMALGTSIGEDEFDASRLRYGKIILMTDADVDGAHIRTLLLTFFFRYMRGLV 529
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL--YSIQRFKGLGEMMPVQ 652
+ G +++ PPLY ++ GKQ Y +DD E + F Y IQR+KGLGEM Q
Sbjct: 530 EGGRVFIAQPPLYLIKSGKQQWYAWDDDERDDILKQFEVKGKENYGIQRYKGLGEMNADQ 589
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
LW TT++PE+R L + IE+A EA+ +FS+LMG +V+ R+ I+ A V
Sbjct: 590 LWSTTMDPEKRTLLMVTIENAMEADKIFSTLMGDQVEPRRAFIETNAKYV 639
>gi|317126747|ref|YP_004093029.1| DNA gyrase subunit beta [Bacillus cellulosilyticus DSM 2522]
gi|315471695|gb|ADU28298.1| DNA gyrase, B subunit [Bacillus cellulosilyticus DSM 2522]
Length = 640
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 323/642 (50%), Positives = 436/642 (67%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY I V +
Sbjct: 9 QSYDESQIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEAMAGYCDTITVTI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 69 EEDNSITVEDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V DG ++Q + RG P L + D+ GT I+F PD ++FT
Sbjct: 127 VVNALSTKLEVEVHLDGKVHYQMFERGVPSADLKV----IGETDKTGTIIKFKPDNEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++D++T+A R+RELAFLN L I + + +D +K EYF+ GG+ +V+ LN K
Sbjct: 183 ETTEYDYDTLANRLRELAFLNRGLRILISDKRNDGKKA---EYFYEGGISSFVEHLNRTK 239
Query: 306 KPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ F + DGI++++A+Q+ +D+++ + +AN+I T +GGTH G K +LTR
Sbjct: 240 EPIHEPPVFIESEKDGISVEIAMQY-NDSFASNLYSFANNINTHEGGTHESGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ K+ D +L G+ VREGLT IISV++P+P+FEGQTKT+LGN E R + D
Sbjct: 299 INDYARKNSLFKETDPNLIGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSL 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E++ +Y+ +P+V I+ K + A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEHMAKYMAENPNVARKIVEKGIMASRARDAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 419 KDATISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKSRLDKILSNNEVRAIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G DF RYHKIII+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ P
Sbjct: 479 ALGTGIGG-DFDISKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRPLLEEGYVYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK VQY Y++ E++++ +QR+KGLGEM P QLWETT++P R
Sbjct: 538 PLFKIQQGKTVQYAYNEKEMERIIKELAETPKPGLQRYKGLGEMNPTQLWETTMDPSTRT 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA A+ F +LMG +V+ R+E IQ NA + NLD
Sbjct: 598 TLQVTLEDAMVADETFETLMGDKVEPRREFIQANAQYVKNLD 639
>gi|423082996|ref|ZP_17071578.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
gi|423086520|ref|ZP_17074925.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357546724|gb|EHJ28633.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357547075|gb|EHJ28974.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
Length = 633
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 441/644 (68%), Gaps = 23/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGST PRGLHHLVYE++DN++DEA GY S+I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++ D S IP+++HP T KS LETVLT LHAGGKFGG S LHGVG
Sbjct: 61 SINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F PD+ +
Sbjct: 119 VSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESQDKGTMIQFMPDETI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+++LN
Sbjct: 175 FD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNK 231
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVD 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKLADC
Sbjct: 351 SVTVDELGSFLEENPATARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++EI+N+
Sbjct: 411 AEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFF+RY + L DEG +Y
Sbjct: 471 ITAYGCGI-GEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV + K+ Y Y D EL + N + +QR+KGLGEM QLWETT+NPE
Sbjct: 530 QPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGV-ELQRYKGLGEMNAEQLWETTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L Q+ +EDAA A+ VFS LMG +V RKE I+ A V NLD
Sbjct: 589 RTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLD 632
>gi|150387859|ref|YP_001317908.1| DNA gyrase subunit B [Alkaliphilus metalliredigens QYMF]
gi|149947721|gb|ABR46249.1| DNA gyrase, B subunit [Alkaliphilus metalliredigens QYMF]
Length = 635
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 338/647 (52%), Positives = 449/647 (69%), Gaps = 25/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN + + YG+EQIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY
Sbjct: 2 ENKIQE-YGAEQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDV 60
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V + DNSI PI+ HP T KS LETV+TVLHAGGKFGG S LH
Sbjct: 61 IDVTIYQDNSIKVVDNGRGIPIETHPQTGKSTLETVMTVLHAGGKFGGGGYKVSGG--LH 118
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALSE +EV V +DG Y Q+Y RG P+T V V GT I F D
Sbjct: 119 GVGISVVNALSEYVEVEVRKDGKLYKQRYERGIPIT----DVQEVGETTETGTTITFKAD 174
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++F I + + T+ R+RE+AFLN + I LR D E+ + + + GG++E+V
Sbjct: 175 SEIFE-EILYVYTTLENRLREMAFLNKGIKITLR--DLREEEVMESSFRYDGGIQEFVMH 231
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN +++ L D V+ F K +G +++ALQ+ AY++ + YAN+I T +GGTH+ G KA
Sbjct: 232 LNRNREALIDKVIYFEKQKEGSVVEVALQYTG-AYTENIFSYANTINTHEGGTHLSGFKA 290
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTR +N +K+ +K+K+I+L GE +REGLT IISV++ +P+FEGQTKT+LGN E++
Sbjct: 291 GLTRVINEYARKNGILKEKEINLLGEDIREGLTAIISVKMADPQFEGQTKTKLGNSEMKG 350
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+V+ S +YL +LE +P I+ KSL A +A AAK+AR+L R+K L +++LPGKL
Sbjct: 351 IVESSTSQYLEAFLEENPHEAKIIIEKSLRAQRAREAAKKARELTRRKGALENTALPGKL 410
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC+ P SEI+IVEG+SAGGSAKQGRDR QAILPLRGKILNVE+ + + EI
Sbjct: 411 ADCAEKDPALSEIYIVEGNSAGGSAKQGRDRATQAILPLRGKILNVEKSRLDRILGSAEI 470
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+N+I A G G+ G +F E +RYHKI+I+TDADVDGAHIRTLLLTFF+RY K L + G +
Sbjct: 471 RNMITAFGTGI-GIEFDIEKVRYHKIVIMTDADVDGAHIRTLLLTFFFRYMKPLIELGYV 529
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLYK+++GK Y Y D E++K+ +A IQR+KGLGEM P QLW+TT+N
Sbjct: 530 YIAQPPLYKLKKGKVENYAYSDEEMQKIIVQMGGSA--DIQRYKGLGEMNPEQLWDTTMN 587
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
PE R Q+ IEDAA A+ +F++LMG +V+ R++ I QN+ + NLD
Sbjct: 588 PETRTFLQVSIEDAAGADDIFNTLMGDKVEPRRQFIEQNSKYVTNLD 634
>gi|260887491|ref|ZP_05898754.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|330837873|ref|YP_004412453.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|260862778|gb|EEX77278.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|329745637|gb|AEB98993.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
Length = 690
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 329/645 (51%), Positives = 445/645 (68%), Gaps = 27/645 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +I+V
Sbjct: 60 VDGDYGANQIQILEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDV 119
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + K A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 120 TIEKDNSITVVDNGRGIPVDMHE-SGKPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVG 176
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S++V V RDG + ++ +G LT + ++ GT++ F PD ++
Sbjct: 177 VSVVNALSTSMDVEVKRDGKIHSIRFEQGVTAAPLTV----IGETEKTGTKVHFVPDPEI 232
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT Q+ +T+ R+RELAFLN +TI L + + + Y F+ GG+ +V+ LN
Sbjct: 233 FTVT-QYSFDTLKHRLRELAFLNQGITIRLVDKRGEGREESY---FYEGGIRSFVEHLNR 288
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +H + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 289 KKEVIHPTPIYFNGIKDDTVVEIAMQY-NDSYMENIYSFVNNINTEEGGTHLAGFKIALT 347
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N +K +KDKD +LSGE VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 348 RAANDFARKQGILKDKDGNLSGEDVREGLTCVISLKIHEPQFEGQTKTKLGNSEVRGIVD 407
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P + ++ K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 408 SIVTEGLTEYFEENPAITKKVIEKAIMASRAREAARKARELTRRKNALEVSSLPGKLADC 467
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE++EI++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 468 SIKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 527
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ +DF RY KIII+TDADVDG+HIRTLLLTFFYRY K L + G +Y+
Sbjct: 528 ITAFGTGIS-DDFDIAKRRYGKIIIMTDADVDGSHIRTLLLTFFYRYMKPLIERGHVYIA 586
Query: 603 VPPLYKVERGKQVQYCYDDAEL-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY++ +GK+ Y Y D EL +K+ NA ++QR+KGLGEM P QLWETT++PE
Sbjct: 587 QPPLYQIRKGKKHWYTYSDDELAQKLNEVGRDNA--TVQRYKGLGEMNPEQLWETTMDPE 644
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ +EDA EA+ +F+ LMG +V+ R++ I+ A V NLD
Sbjct: 645 GRTMLQVRMEDAEEADELFTILMGDKVEPRRQFIEEHAKHVRNLD 689
>gi|404486886|ref|ZP_11022074.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
gi|404335940|gb|EJZ62406.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
Length = 651
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/656 (49%), Positives = 450/656 (68%), Gaps = 28/656 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E +K+Y ++ IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGYA++
Sbjct: 3 EETENKSYSADSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDEALAGYATH 62
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + DNSI P+D+H +KSALE VLTVLHAGGKF S Y VSGGLH
Sbjct: 63 IEVYINEDNSIRVVDNGRGIPVDMHEKEHKSALEVVLTVLHAGGKFDKGS--YKVSGGLH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+S VNALS L + R+G Y Q+YS GKP+ + + + GT I F PD
Sbjct: 121 GVGVSCVNALSTYLRAEIRRNGKIYMQEYSCGKPLHDVEI----IGETEETGTTIIFRPD 176
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYV 298
+F+ + +D+N +A R+R+LA+LN +T++L + + + +Y E F++ GL+E+V
Sbjct: 177 DSIFSVTV-YDYNILANRLRDLAYLNAGITLSLTDKRTTNDAGEYRKEVFYSKEGLKEFV 235
Query: 299 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++++++K+ L DV+ + G+ +++A+ + + Y++ + Y N+I TI+GGTH+ G
Sbjct: 236 RYIDSNKEHLIDDVIHIATERQGVPVEVAMTYNT-TYNENVYSYVNNINTIEGGTHLTGF 294
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
+ LTRTL + SK ++ + +S + REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 295 RRGLTRTLKKYAEDSKMLEKVKVEISSDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEV 354
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
VD +V E L YLE HP +I+ K + A A AA++AR++V++KS L LPG
Sbjct: 355 IGAVDTAVSEALANYLEEHPAQAKTIVEKVIIAATARHAARKAREMVQRKSPLSGGGLPG 414
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS PE+ EIF+VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + +++++
Sbjct: 415 KLADCSSRNPEDCEIFLVEGDSAGGSAKQGRDRMFQAILPLRGKILNVEKAMDHKVFESQ 474
Query: 538 EIQNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
EI N+ +ALG+ + E+ KEA LRYHKIII+TDADVDGAHI TLLLTFF+R + L
Sbjct: 475 EISNMFKALGVTIGTEEDSKEANIEKLRYHKIIIMTDADVDGAHIATLLLTFFFRRMRPL 534
Query: 594 FDEGCIYVGVPPLYKV--ERGKQVQYCYDDAELKK--VKSSFPSNALYSIQRFKGLGEMM 649
++G +Y+ PPLYK +RGK +YC+ D + + +K + L QR+KGLGEM
Sbjct: 535 LEQGYVYLATPPLYKCKSKRGKTEEYCWTDQQKDQFCLKYCEGNEQLMETQRYKGLGEMN 594
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT++PE R+LKQ+ I++AAEA+ VFS LMG V R+E I++ A N+D
Sbjct: 595 PHQLWETTMDPENRILKQVTIDNAAEADRVFSMLMGEDVGPRREFIESNATYANID 650
>gi|418324495|ref|ZP_12935732.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
gi|365225912|gb|EHM67148.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
Length = 642
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 331/642 (51%), Positives = 431/642 (67%), Gaps = 17/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TENYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYADTIEVI 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIRITDNGRGIPVDTQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V RD YHQ Y RG P V+ D GT IRF D ++F
Sbjct: 125 SVVNALSERLEVYVHRDNKIYHQAYERGVP--QFDLEVVGETDDDNTGTEIRFKADPEIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D+ T+ RI+ELAFLN ++I LR E + E + N Y + GG++ YV+ LN +
Sbjct: 183 TETTVYDYETLQQRIKELAFLNKGISITLRDERDEDEVREDN-YHYEGGIKSYVEMLNEN 241
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S ++ +L YAN+I T +GGTH EG K +L+R
Sbjct: 242 KEPLHDEPIYIHQTKDDIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEEGFKRALSR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 301 ILNSYGLQSKIIKDDKDKLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDK 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 361 LFSAQFERFLYEHPQVGRVIVDKGIMASRARVAAKKAREVTRRKSALEVSSLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIFIVEGDSAGGS K+GRD QAILPLRGKILNVE+ + N EI+++I
Sbjct: 421 SKNPDESEIFIVEGDSAGGSTKEGRDSATQAILPLRGKILNVEKSRLDRILNNNEIRSMI 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F+ RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G +Y+
Sbjct: 481 TAFGTGIGGE-FELSKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRPLIEAGYVYIAQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+ Y ++D EL +K+ +SI R+KGLGEM QLWETT+NP+ R
Sbjct: 540 PPLYKLTQGKEKYYVFNDRELDNLKAELNPTPKWSISRYKGLGEMNADQLWETTMNPDNR 599
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ ++DA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 600 SMLQVTLDDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 641
>gi|89892751|ref|YP_516238.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219666076|ref|YP_002456511.1| DNA gyrase subunit beta [Desulfitobacterium hafniense DCB-2]
gi|423075892|ref|ZP_17064606.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
gi|89332199|dbj|BAE81794.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219536336|gb|ACL18075.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DCB-2]
gi|361853120|gb|EHL05306.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
Length = 644
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 329/649 (50%), Positives = 446/649 (68%), Gaps = 23/649 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
KE + Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY
Sbjct: 7 IKETIPTNDYNAGQIEVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGYC 66
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
IEV + DNSI P+D+HP K A+E LTVLHAGGKF GS+ Y VSGG
Sbjct: 67 DTIEVTIHKDNSISVVDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKFSGSA--YKVSGG 124
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+SVVNALS L V V +DG YHQ++ RGK T L + VD ++ GT I F
Sbjct: 125 LHGVGMSVVNALSTWLHVEVRKDGNIYHQEFMRGKTKTELAV-IGQVDP-NQTGTTITFS 182
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
PD ++F + F +T+A R+REL+FLN K++I L D +++ Y+ GG+ ++V
Sbjct: 183 PDPEIFEDTV-FLFDTLAHRLRELSFLNKKVSITL----IDAREDKKEVYYHTGGIYDFV 237
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
+++N K+ LH + + F + DG+ +++++Q+ +D Y + + YAN+I T +GGTH G
Sbjct: 238 KYINRSKESLHPEPIYFEAEKDGVQVEVSMQY-NDGYVENLFSYANNIHTHEGGTHESGF 296
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
KA+LTR N +K+ +K + +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN E+
Sbjct: 297 KAALTRVANDYARKNNILKANEANLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEI 356
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +VD E L+ + E +P + ++ KS+ A +A AA++AR+L R+KS L S+LPG
Sbjct: 357 RSIVDSITGEGLSAFFEENPAIGKKVIEKSIQASRAREAARKARELTRRKSALEVSALPG 416
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCS E E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N
Sbjct: 417 KLADCSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDRILGNA 476
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+ +I A+G G+ EDF E RYHK++I+TDADVDGAHIR LLLTFF+RY K L +
Sbjct: 477 EIRAMITAMGTGIS-EDFDIEKARYHKLVIMTDADVDGAHIRILLLTFFFRYMKPLLENN 535
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
+Y+ PPL+KV++GK + Y Y + EL K++ + + IQR+KGLGEM QLWETT
Sbjct: 536 YVYIAQPPLFKVKKGKDIHYVYSNEELAKLQDEIGRDRV-EIQRYKGLGEMNAEQLWETT 594
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++P +R + Q+ +EDA +A+ +F+ LMG V+ R+E IQ+ A V NLD
Sbjct: 595 MDPAKRTILQVTMEDAIKADELFTILMGDVVEPRREFIQDNAQYVRNLD 643
>gi|292669300|ref|ZP_06602726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
gi|292649141|gb|EFF67113.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
Length = 685
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 340/657 (51%), Positives = 442/657 (67%), Gaps = 26/657 (3%)
Query: 62 SIATEAFKE--NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAV 119
+I TE + V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++
Sbjct: 41 AIGTEEMGDEVTAVDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSI 100
Query: 120 DEAQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSS 170
DEA AGY N+EV + DNSI P+D+H + A+E VLTVLHAGGKFGG
Sbjct: 101 DEALAGYCDNVEVVIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD- 158
Query: 171 SGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR 230
GY VSGGLHGVG+SVVNALS S+EV V RDG Y ++RG VT H + + +
Sbjct: 159 -GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEISFTRG--VTVNKLHEIGI--SET 213
Query: 231 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF 290
GTR+ F PD ++FT + T+ R+RELAFLN +TI L D E+ + + F
Sbjct: 214 TGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHF 270
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG+ +V LN K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +
Sbjct: 271 EGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEE 329
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTK
Sbjct: 330 GGTHLAGFKIALTRAANDFARRLSVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTK 389
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN EVR +VD V E LTEY E +P + +L K L A +A AA++AR+L R+K+
Sbjct: 390 TKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEKGLMASRAREAARKARELTRRKNA 449
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+
Sbjct: 450 LEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAR 509
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
++ N EI+ +I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY
Sbjct: 510 LDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADVDGAHIRTLLLTFFYRY 568
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
K L D G +Y+ PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM
Sbjct: 569 MKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAKKLDEIGRDGV-TIQRYKGLGEMN 627
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 628 PEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 684
>gi|345862366|ref|ZP_08814591.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
gi|344324551|gb|EGW36104.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
Length = 659
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 450/643 (69%), Gaps = 23/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S +Y + QI+VLEGLEAVRKRP MYIG+T RGLHHLVYEI+DN++DEA AG+ + I+V
Sbjct: 28 SDSYNAGQIEVLEGLEAVRKRPGMYIGTTSSRGLHHLVYEIVDNSIDEALAGFCNQIDVF 87
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ ADNSI P+D+HP T A+E LTVLHAGGKFGGS S Y VSGGLHGVGL
Sbjct: 88 IHADNSITVVDNGRGIPVDIHPKTGIPAVEVALTVLHAGGKFGGSESAYKVSGGLHGVGL 147
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ L V V + G YHQ+Y+ GKP T +++ + + GT+I F PD +F
Sbjct: 148 SVVNALSKWLVVEVSKGGHVYHQEYAIGKP----TSNLVNIGITESSGTKISFIPDPDIF 203
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +D + +A R+REL+FLN +TI L +D N + GG++++V++LN +
Sbjct: 204 EDTV-YDFDILAHRLRELSFLNKSVTINL----TDERTNVKETFLHTGGIQDFVRYLNKN 258
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH F + + D + +++++Q+ +D Y++ + YAN+I T +GGTH G K++LTR
Sbjct: 259 KDCLHPQPIFIETIKDHVQVEVSMQY-NDGYAENLFSYANNINTQEGGTHEAGFKSALTR 317
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K+ +K D +L+G+ +REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD
Sbjct: 318 VVNDYARKNNIIKAADSNLTGDDIREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVDS 377
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ E L+ +LE +P + + KS+ A +A AA++AR+L R+KS L +SLPGKLADCS
Sbjct: 378 ATGEGLSTFLEENPAIARKFIDKSVQAARARDAARKARELTRRKSALEGTSLPGKLADCS 437
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P+ E+++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE+ + +N EI+ +I
Sbjct: 438 WKEPDLCEMYLVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARLDKILENAEIRAMI 497
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ E F E RY+K+II+TDADVDGAHIRTLLLTFFYRY + L + +Y+
Sbjct: 498 TAMGTGISDE-FDIEKARYNKLIIMTDADVDGAHIRTLLLTFFYRYMRPLIENHYVYIAQ 556
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++G+ +QY Y D EL K+ + + IQR+KGLGEM P QLWETT++P +R
Sbjct: 557 PPLFKVKKGRDIQYAYSDFELGKILEKIGKDKV-EIQRYKGLGEMNPEQLWETTMDPAKR 615
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA + +F+ LMG +V+ R++ I +A ++ N+D
Sbjct: 616 TILQVTMEDAIRSEEMFTVLMGDKVEPRRDFINLHAKDVRNID 658
>gi|319651104|ref|ZP_08005238.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
gi|317397274|gb|EFV77978.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
Length = 642
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 440/642 (68%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V +
Sbjct: 11 QSYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCSEINVII 70
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 71 EKDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 128
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V RDG +Y+QK+ RG P L + D GT I F PD ++FT
Sbjct: 129 VVNALSTVLEVFVHRDGQKYYQKFERGVPSADLEV----IGETDHTGTTIHFKPDSEIFT 184
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++D+ T+A RIRELAFLN L I + + E+N+ +EY + GG++ YV+ LN K
Sbjct: 185 ETLEYDYETLANRIRELAFLNRGLKITI---EDKREENKKSEYMYEGGIKSYVEHLNRTK 241
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + +GIT+++++Q+ +D ++ + +AN+I T +GGTH G K +LTR
Sbjct: 242 EVLHEEPIYIDGEREGITVEVSIQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTRV 300
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ K+ D +LSGE VREGLT I+SV+ P+P+FEGQTKT+LGN EVR D
Sbjct: 301 INDYARKNGVFKESDANLSGEDVREGLTAIVSVKHPDPQFEGQTKTKLGNSEVRAATDTI 360
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E L +++ +P V I+ K L A +A LAAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 361 FSEALEKFMLENPTVARKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSS 420
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 421 KDPSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIIT 480
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 481 AIGTGI-GEDFDISRARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYIYIAQP 539
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+++GK+++Y Y+D EL K+ PS IQR+KGLGEM P QLWETT+NPE R
Sbjct: 540 PLYKIQQGKKIEYAYNDRELDKILGELPSQPKPGIQRYKGLGEMNPGQLWETTMNPESRT 599
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ +EDA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 600 LLQVNLEDAIEADETFEILMGDKVEPRRNFIEENAVYVKNLD 641
>gi|357058348|ref|ZP_09119202.1| B subunit [Selenomonas infelix ATCC 43532]
gi|355374201|gb|EHG21502.1| B subunit [Selenomonas infelix ATCC 43532]
Length = 684
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/644 (51%), Positives = 438/644 (68%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY N+EV
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 VIHRDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSEMDVQVRRDGKIHAISFTRG--VTQEKLH--EIGASETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L E + E+ + + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLVDERGEAERRE--TFHFDGGIRSFVSHLNR 282
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P + +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPAITKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY K L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLAKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NPE
Sbjct: 581 QPPLYQIRKDKKHFYTYSDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEG 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|311032261|ref|ZP_07710351.1| DNA gyrase subunit B [Bacillus sp. m3-13]
Length = 636
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 436/641 (68%), Gaps = 21/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y IQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V +
Sbjct: 5 SYDESNIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCSEINVIVE 64
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 65 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 122
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L++ V RDG ++Q++++G P L + D GT I F PD+++FT
Sbjct: 123 VNALSSELKIYVHRDGKIHYQQFNKGVPNEDLKI----IGETDVTGTIIHFVPDEEIFTE 178
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++T+A R+RELAFLN + I + ED E + NEY + GG+ YV+ LN K+
Sbjct: 179 TKEYDYDTLAHRLRELAFLNKGIRITI--EDKREETPKKNEYHYEGGIASYVEHLNRTKE 236
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ V F + DGI+I++ALQ+ +D+Y+ + +AN+I T +GGTH G K +LTR +
Sbjct: 237 VIHEEVVFVEGEKDGISIEVALQY-NDSYTSNLYSFANNISTYEGGTHESGFKTALTRVI 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ KD D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN E R V D
Sbjct: 296 NDYARKNNIFKDADSNLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEARTVTDSVF 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E +L +P I+ K L A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 356 TEKFEGFLLENPSAARKIVEKGLMASRARMAAKKARELTRRKSALEISSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SEI++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N E++ +I A
Sbjct: 416 DPSISEIYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAIITA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PP
Sbjct: 476 LGTGI-GEDFDISRARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPP 534
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYK+++GK+++Y Y+D +L+++ ++ IQR+KGLGEM P QLWETT++P R L
Sbjct: 535 LYKIQQGKKIEYAYNDRQLEEILATMSDQPKAGIQRYKGLGEMNPEQLWETTMDPVSRTL 594
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ ++DA EA+ F LMG +V+ R+ IQ+ A V NLD
Sbjct: 595 LQVSLQDAIEADETFEILMGDKVEPRRNFIQDNARYVKNLD 635
>gi|374709302|ref|ZP_09713736.1| DNA gyrase subunit B [Sporolactobacillus inulinus CASD]
Length = 639
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 323/641 (50%), Positives = 442/641 (68%), Gaps = 21/641 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + QIQVLEGLEAVRKRP MYIG+TG +GLHHLV+EI+DN++DEA AGY S+I+V +
Sbjct: 9 QSYNASQIQVLEGLEAVRKRPGMYIGTTGEKGLHHLVWEIVDNSIDEALAGYCSHIQVII 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+ I P+DL + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 69 EKEGGITVMDDGRGIPVDLQKKVGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS + V V+R+G Y+Q+Y RGKP+ L + ++ GT F PD ++F
Sbjct: 127 VVNALSTKMWVKVYRNGHVYYQEYHRGKPLADLKI----IGDSEQTGTTTHFEPDPEIFK 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
FD++T+ R+RELAFLN + I++ ED E+ + + Y + GG+ YV++LN K
Sbjct: 183 DTTTFDYDTLRVRVRELAFLNKNIRISI--EDRR-EEGKRDTYHYEGGIRSYVEFLNRSK 239
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ +H+ + + DGI +++A+Q+ S ++ + +AN+I T +GGTH G K +LTR +
Sbjct: 240 EVIHEPIDLEGEKDGIKVEIAMQYNS-GFTGQLYSFANNIHTHEGGTHEYGFKVALTRVI 298
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K++ +K D +L+G+ VREGLT I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 299 NDYARKNQLIKASDPNLTGDDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAITDTLF 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E + YL +PDV I+ K L A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 SEAFSRYLLENPDVARLIVDKGLIASRARTAAKKARELTRRKSSLEVSSLPGKLADCSSK 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I A
Sbjct: 419 DASISELYIVEGDSAGGSAKQGRDRMFQAILPLRGKILNVEKARLDRILSNAEIRAMITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ G++F E RYHKIII+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PP
Sbjct: 479 LGTGI-GDEFNLEKARYHKIIIMTDADVDGAHIRTLLLTFFYRFMRPLLENGYVYIAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L++V+ GK + Y YDD +LK+++S+ P N ++QR+KGLGEM P QLWETT++PE R++
Sbjct: 538 LFRVQYGKTLLYAYDDNDLKRIQSNLPQNVKPALQRYKGLGEMNPEQLWETTMDPENRLV 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA EA+ F LMG RV+ R++ IQ NA NLD
Sbjct: 598 LQVNLEDAIEADQTFEMLMGDRVEPRRDFIQKNAVYAQNLD 638
>gi|375092559|ref|ZP_09738837.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
gi|374560728|gb|EHR32085.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
Length = 637
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 328/643 (51%), Positives = 441/643 (68%), Gaps = 27/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN+VDEA AG A +I V L
Sbjct: 7 YGESNIRVLEGLEAVRVRPGMYIGSTDERGLHHLVYEVVDNSVDEALAGRADSIVVELHQ 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ H T KS LETVLT+LHAGGKF S Y+ SGGLHGVG+SVV
Sbjct: 67 DGSCEVTDNGSGIPVKKHATTGKSTLETVLTILHAGGKF--DSEAYAFSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L + RDG Y Q++S+GKP T L H + D GT IRFWPD +VF T
Sbjct: 125 NALSTKLVAEIRRDGYRYTQEFSQGKPKTKLQKH----EETDETGTSIRFWPDGEVFET- 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 306
+ F+ T+ R E+ FLN L I L DP ++ E F A GGL +V++LN +
Sbjct: 180 LDFNRATLEKRFEEMTFLNEGLKITLIDYREDP---KFEEDFIAEGGLSTFVKFLNKKRT 236
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
LHD V+ ++ VDG +D A+Q+ +D+YS+ +L +AN++ T +GGTH+ G ++ LT+T+
Sbjct: 237 ALHDDVIHYKGMVDGSEVDFAMQY-TDSYSENVLSFANTVLTGEGGTHLTGFRSGLTKTI 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N+ ++ +K+KD + SGE +REG+T II+V++ NP+FEGQTK +LG+ E+R +VD V
Sbjct: 296 NNYAREYDFLKEKDENYSGEDIREGITAIIAVKLSNPQFEGQTKGKLGSSEMRGIVDTFV 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK-SVLRSSSLPGKLADCSS 484
E L+EYLE +P + I+ K SA +A +A+K+ARDL R K S+L S++LPGKLA+C S
Sbjct: 356 SEKLSEYLEENPKIAKKIMDKCESARRARVASKKARDLSRNKNSLLSSTTLPGKLAECQS 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
T E+E+FIVEGDSAGGSAK GRD ++QAILP+RGKILNVE+ A + +EEI+ LI
Sbjct: 416 TDITENELFIVEGDSAGGSAKLGRDNKYQAILPIRGKILNVEKARIAKVLSSEEIKALIT 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ GEDF + LRY KII++TDADVDGAHI TLLLTF YRY + L + G +++ P
Sbjct: 476 AFGTGI-GEDFDIKNLRYGKIILMTDADVDGAHIDTLLLTFLYRYMRPLIENGNVFIAQP 534
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV +GK+ +Y YD+ ELK + + Y I R+KGLGEM QLWETT++PE R+
Sbjct: 535 PLFKVTQGKKERYVYDEKELKSIIENIKGEN-YKINRYKGLGEMNAEQLWETTMHPEHRV 593
Query: 665 LKQLVIEDAA-EANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ I++ + + F++LMG +V+ R+E I +NA N+D
Sbjct: 594 LIQVKIDNESITLDDTFNTLMGDKVEPRREFIEENAKFATNID 636
>gi|420169307|ref|ZP_14675909.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
gi|394231515|gb|EJD77142.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
Length = 643
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMMQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|296452676|ref|ZP_06894367.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296880071|ref|ZP_06904040.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
gi|296258458|gb|EFH05362.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296428938|gb|EFH14816.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
Length = 633
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 441/644 (68%), Gaps = 23/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGST PRGLHHLVYE++DN++DEA GY S+I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++ D S IP+++HP T KS LETVLT LHAGGKFGG S LHGVG
Sbjct: 61 SINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F PD+ +
Sbjct: 119 VSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESHDKGTMIQFMPDETI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+++LN
Sbjct: 175 FD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNK 231
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVD 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKLADC
Sbjct: 351 SVTVDELGSFLEENPVTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++EI+N+
Sbjct: 411 AEKDPAKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFF+RY + L DEG +Y
Sbjct: 471 ITAYGCGI-GEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV + K+ Y Y D EL + N + +QR+KGLGEM QLWETT+NPE
Sbjct: 530 QPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGV-ELQRYKGLGEMNAEQLWETTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L Q+ +EDAA A+ VFS LMG +V RKE I+ A V NLD
Sbjct: 589 RTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLD 632
>gi|422344230|ref|ZP_16425156.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
gi|355377549|gb|EHG24766.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
Length = 684
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 339/657 (51%), Positives = 440/657 (66%), Gaps = 26/657 (3%)
Query: 62 SIATEAFKE--NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAV 119
+I TE + V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++
Sbjct: 40 AIGTEEMGDEVTAVDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSI 99
Query: 120 DEAQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSS 170
DEA AGY N+EV + DNSI P+D+H + A+E VLTVLHAGGKFGG
Sbjct: 100 DEALAGYCDNVEVVIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD- 157
Query: 171 SGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR 230
GY VSGGLHGVG+SVVNALS S+EV V RDG Y ++RG V L + + +
Sbjct: 158 -GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEISFTRGVTVNKLH----EIGTSET 212
Query: 231 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF 290
GTR+ F PD ++FT + T+ R+RELAFLN +TI L D E+ + + F
Sbjct: 213 TGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHF 269
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG+ +V LN K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +
Sbjct: 270 EGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEE 328
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH+ G K +LTR N + +KDKD +LSGE VREGLTC+IS++V P+FEGQTK
Sbjct: 329 GGTHLAGFKIALTRAANDFARCLSVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTK 388
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN EVR +VD V E LTEY E +P + +L K L A +A AA++AR+L R+K+
Sbjct: 389 TKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEKGLMASRAREAARKARELTRRKNA 448
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+
Sbjct: 449 LEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAR 508
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
++ N EI+ +I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY
Sbjct: 509 LDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADVDGAHIRTLLLTFFYRY 567
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
K L D G +Y+ PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM
Sbjct: 568 MKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAKKLDEIGRDGV-TIQRYKGLGEMN 626
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 627 PEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|393809327|gb|AFN25837.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 332/642 (51%), Positives = 437/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARVIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|423310102|ref|ZP_17288086.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
gi|392682742|gb|EIY76084.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
Length = 653
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 317/650 (48%), Positives = 448/650 (68%), Gaps = 29/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG+ +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 SYSAENIQVLEGLEAVRKRPAMYIGNISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDYHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+YS G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYSCGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 304
+ ++++ +A R+RELA+LN + I+L D E N E F++ GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSS 244
Query: 305 KKP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ ++DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHFMNDVIYINTEKQGTPVEVAIMYNT-SYNENVHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E LT YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
+ALG+ GV GED K+ + LRY KIII+TDADVDG+HI TL++T F+RY + +GC
Sbjct: 484 QALGIRFGVDGEDSKEANIDKLRYKKIIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGC 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWE
Sbjct: 544 LYIATPPLYLCTKGKAKEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWE 602
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE RMLKQ+ +E+AAEA+ +FS LMG V R++ I+ A N+D
Sbjct: 603 TTMNPENRMLKQVHLENAAEADYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|27466922|ref|NP_763559.1| DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57865927|ref|YP_190090.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251811368|ref|ZP_04825841.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|282874725|ref|ZP_06283604.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|293367576|ref|ZP_06614229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417647460|ref|ZP_12297298.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|417656803|ref|ZP_12306482.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|417659128|ref|ZP_12308738.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|417909208|ref|ZP_12552947.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|417911948|ref|ZP_12555645.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|417912698|ref|ZP_12556384.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|418325276|ref|ZP_12936483.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|418604519|ref|ZP_13167866.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|418608801|ref|ZP_13171981.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|418612386|ref|ZP_13175430.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|418617359|ref|ZP_13180257.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|418621984|ref|ZP_13184746.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|418624284|ref|ZP_13186961.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|418626542|ref|ZP_13189140.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|418664988|ref|ZP_13226448.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|419769996|ref|ZP_14296084.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|420172895|ref|ZP_14679392.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|420181842|ref|ZP_14688001.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|420186258|ref|ZP_14692330.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|420188871|ref|ZP_14694872.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|420194332|ref|ZP_14700147.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|420197594|ref|ZP_14703317.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|420207785|ref|ZP_14713271.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|420215373|ref|ZP_14720642.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|420216527|ref|ZP_14721734.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|420222776|ref|ZP_14727691.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|420224635|ref|ZP_14729475.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|420227733|ref|ZP_14732497.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|420230696|ref|ZP_14735375.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|420233032|ref|ZP_14737654.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|421608632|ref|ZP_16049848.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
gi|38604835|sp|Q8CQK4.1|GYRB_STAES RecName: Full=DNA gyrase subunit B
gi|81819302|sp|Q5HK03.1|GYRB_STAEQ RecName: Full=DNA gyrase subunit B
gi|27314464|gb|AAO03601.1|AE016744_4 DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57636585|gb|AAW53373.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251805117|gb|EES57774.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|281296441|gb|EFA88956.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|291318289|gb|EFE58682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329724157|gb|EGG60675.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|329735731|gb|EGG72012.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|329736056|gb|EGG72329.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|341651705|gb|EGS75502.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|341653799|gb|EGS77565.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|341657190|gb|EGS80883.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|365228525|gb|EHM69706.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|374404742|gb|EHQ75710.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|374409769|gb|EHQ80544.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|374409806|gb|EHQ80580.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|374818652|gb|EHR82802.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|374819688|gb|EHR83808.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|374828008|gb|EHR91858.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|374828054|gb|EHR91901.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|374831612|gb|EHR95349.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|383357678|gb|EID35145.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|394241161|gb|EJD86579.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|394250949|gb|EJD96080.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|394252623|gb|EJD97652.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|394253830|gb|EJD98820.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|394264909|gb|EJE09577.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|394265695|gb|EJE10346.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|394275018|gb|EJE19410.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|394282349|gb|EJE26550.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|394288730|gb|EJE32634.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|394291788|gb|EJE35574.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|394294485|gb|EJE38164.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|394296118|gb|EJE39748.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|394296584|gb|EJE40209.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|394300592|gb|EJE44086.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|406655792|gb|EKC82215.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
Length = 643
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|419770807|ref|ZP_14296873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
gi|383362634|gb|EID39981.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
Length = 643
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIIVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|76802387|ref|YP_327395.1| DNA topoisomerase II subunit B (DNA gyrase) [Natronomonas pharaonis
DSM 2160]
gi|76558252|emb|CAI49840.1| DNA gyrase subunit B [Natronomonas pharaonis DSM 2160]
Length = 639
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 327/634 (51%), Positives = 432/634 (68%), Gaps = 18/634 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DNA+DEA AGY IEV +
Sbjct: 7 YSAGQIQVLEGLEAVRKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGYCDTIEVVIND 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVTVRDDGRGIPVDTHEDHDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ LEV + RDG +H ++ G+P L V +D + GT IRFWPD +F T
Sbjct: 125 NALSKWLEVEIKRDGHVWHHRFDHGEPENGLE-QVREMDPNESTGTEIRFWPDDDIFETT 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F +T+ R+RELAFLNP + I +R D PE+ + + + GG+ E+V +LN +
Sbjct: 184 -DFTFSTLESRLRELAFLNPGVGITIR--DERPEEPDASTFEYDGGIREFVAYLNETRDV 240
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ ++ F + D I +++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 241 LHENIIYFEDEEDDIHVEVAMQ-ATAGVQGSIHAFANNINTREGGTHLTGFKTALTRVIN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ +KD D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +V
Sbjct: 300 DYATSNGMLKDLDGNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNGEVRGIVESAVH 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +LE HPD ++I+SK++ A KA AAK+A +L R+KS L S+SLPGKL+DC +
Sbjct: 360 EELATHLEEHPDTAEAIISKAVEAAKARKAAKKAEELTRRKSALESTSLPGKLSDCQTRD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEESE+F+VEGDSAGGSAKQGR+ FQAILPLRGKILNVE+ + +N EI+NLI A+
Sbjct: 420 PEESELFVVEGDSAGGSAKQGRNPEFQAILPLRGKILNVEKHRLDRILENNEIRNLITAV 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F E RY KIIIL DADVDGAHIRTLLLTF YR+ L + G +Y PPL
Sbjct: 480 GTGI-GEEFDIEEARYQKIIILCDADVDGAHIRTLLLTFLYRHMTPLIEAGYVYAAQPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V G +AE ++ + +QRFKGLGEM P QLW+TT+NPE R+LK
Sbjct: 539 YRVRDGGDTYDAMTEAERDRIVEEVCDGSPDQVQRFKGLGEMNPKQLWDTTMNPENRILK 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
Q+ IEDAA A+ +FS LMG V+ RK+ I+ A+
Sbjct: 599 QITIEDAAAADRMFSVLMGDAVEPRKQFIKEHAD 632
>gi|160891431|ref|ZP_02072434.1| hypothetical protein BACUNI_03882 [Bacteroides uniformis ATCC 8492]
gi|270295441|ref|ZP_06201642.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|423304784|ref|ZP_17282783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
gi|156858838|gb|EDO52269.1| DNA gyrase, B subunit [Bacteroides uniformis ATCC 8492]
gi|270274688|gb|EFA20549.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|392683448|gb|EIY76783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
Length = 653
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 317/650 (48%), Positives = 447/650 (68%), Gaps = 29/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 SYSAENIQVLEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDYHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+YS G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYSCGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 304
+ ++++ +A R+RELA+LN + I+L D E N E F++ GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSS 244
Query: 305 KKP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ ++DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHFMNDVIYINTEKQGTPVEVAIMYNT-SYNENVHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E LT YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
+ALG+ GV GED K+ + LRY KIII+TDADVDG+HI TL++T F+RY + +GC
Sbjct: 484 QALGIRFGVDGEDSKEANIDKLRYKKIIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGC 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWE
Sbjct: 544 LYIATPPLYLCTKGKAKEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWE 602
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE RMLKQ+ +E+AAEA+ +FS LMG V R++ I+ A N+D
Sbjct: 603 TTMNPENRMLKQVHLENAAEADYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|397780370|ref|YP_006544843.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
gi|396938872|emb|CCJ36127.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
Length = 656
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 332/665 (49%), Positives = 448/665 (67%), Gaps = 42/665 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY + I VLEGL VR+RPAMYIGST RGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 1 MTDTYDASHITVLEGLRPVRERPAMYIGSTEARGLHHLVYEVVDNSVDEALAGFCDLILV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D SI P+D+ P KSALE VLTVLHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 TINRDGSITIEDNGRGIPVDIMPQYGKSALEIVLTVLHAGGKFDKNT--YQVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRG---KPVTTL--TCHVL--------------P 224
+SVVNAL+ L+ TV+RDG Y ++ +G KP+ + T H + P
Sbjct: 119 VSVVNALASWLDATVFRDGNVYEMQFRQGLVVKPLASRPETDHEMKIRYEERYGTRPAQP 178
Query: 225 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 284
+D + QGTRI F PD+ +F T + FD++ + R+RELA+LN LTI+LR E +
Sbjct: 179 LDYERLQGTRITFQPDRSIFET-VNFDYDMLDHRLRELAYLNSGLTISLRDERTGDAIT- 236
Query: 285 YNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGY 341
Y F GG+ E+V + K+PLHD V + + D + +++ALQ+ +++Y +T+ Y
Sbjct: 237 ---YCFEGGIREFVAHIGEGKEPLHDEVIYFQKSDPESLVEVEVALQY-NNSYGETVYTY 292
Query: 342 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 401
NS+ T +GGTH+EG ++++TR +N+ +++ K D + GE VREGL +IS RV
Sbjct: 293 VNSVNTREGGTHLEGFRSAITRAINNSARRNNLFKSNDAQVKGEDVREGLASVISTRVAE 352
Query: 402 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 461
P+FEGQTK RLGN VR +VD V LTEY E HP L +I+ K+++A +A AA+ AR
Sbjct: 353 PQFEGQTKMRLGNSNVRGIVDSLVYSSLTEYFEEHPKTLQAIVDKAMAAARAREAARNAR 412
Query: 462 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 521
+L R+KS L ++ LPGKLADC P +SE++IVEGDSAGGSAKQGRDR+FQAILPLRGK
Sbjct: 413 ELARRKSTLETTGLPGKLADCQERDPAKSELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 472
Query: 522 ILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 581
ILNVE+ E + KN EIQ LI A+G GV G+ F E RYH++I++TDADVDGAHIRTL
Sbjct: 473 ILNVEKASEHRILKNAEIQALISAIGTGV-GDSFDVERARYHRVILMTDADVDGAHIRTL 531
Query: 582 LLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQR 641
LLTFFYRY L + G IY+ PPLY++ RGKQ +Y Y + +++++ + F + +IQR
Sbjct: 532 LLTFFYRYMMELVENGYIYIAQPPLYRIFRGKQEKYAYREEDMREIIAEFGEKGV-TIQR 590
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAAN 700
+KGLGEM QLW TT++PE R+LKQ+ IEDA AN +F LMG VD R++ I ++A
Sbjct: 591 YKGLGEMNAEQLWSTTMDPENRVLKQVRIEDAVYANEIFEKLMGENVDARRDFIRRHAKE 650
Query: 701 LVNLD 705
++NLD
Sbjct: 651 VINLD 655
>gi|375086659|ref|ZP_09733061.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
gi|291532646|emb|CBL05759.1| DNA gyrase subunit B [Megamonas hypermegale ART12/1]
gi|374564516|gb|EHR35806.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
Length = 665
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 328/651 (50%), Positives = 450/651 (69%), Gaps = 24/651 (3%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ + V YG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AG
Sbjct: 27 ESAEVTAVEGDYGANQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNSIDEALAG 86
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
Y ++IEV + DNSI P+D+H + K A+E VLTVLHAGGKFGGS GY VS
Sbjct: 87 YCTHIEVTIHKDNSITVTDNGRGIPVDMH-ESGKPAVEVVLTVLHAGGKFGGS--GYKVS 143
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVG+SVVNALS ++EV V RDG + + +G VT V V D GT +
Sbjct: 144 GGLHGVGVSVVNALSTNMEVKVKRDGKIHEITFEKG--VTKEPLKV--VGQTDETGTLVH 199
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F + +D++T+ R+REL+FLN +TI L D PE+ + ++F GG+
Sbjct: 200 FVPDAEIFDETV-YDYDTLRHRLRELSFLNRGITIILT--DERPEEVRQETFYFEGGISS 256
Query: 297 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V+ LN +K+ ++ + V F D +++ALQ+ + +YS+ + + N+I T +GGTH+
Sbjct: 257 FVEHLNRNKEVINPEPVYFNGTKDTTVVEIALQYNT-SYSENIYSFVNNINTEEGGTHLA 315
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K++LTR N ++ +K+ + +L GE +REGLTC+IS+++ P+FEGQTKT+LGN
Sbjct: 316 GFKSALTRAANDFARRQGIIKNNEDNLVGEDIREGLTCVISIKLREPQFEGQTKTKLGNS 375
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR +VD V E L+EY E +P + I+ KS+ A +A AA++AR+L R+K+ L SSL
Sbjct: 376 EVRGIVDSIVSEGLSEYFEENPVISKKIIEKSIMASRAREAARKARELTRRKNALEVSSL 435
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS PE++EI++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +
Sbjct: 436 PGKLADCSVKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILN 495
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
NEEI+ +I A G G+ G +F RY KIII+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 496 NEEIRTMITAFGSGI-GSEFDITKRRYGKIIIMTDADVDGAHIRTLLLTFFYRYMRPLIE 554
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G +Y+ PPLY++ +G+ Y Y D EL + + + ++QR+KGLGEM P QLWE
Sbjct: 555 NGHVYIAQPPLYQIRKGRSHWYTYSDEELAQKLDEIGRDGI-TVQRYKGLGEMNPEQLWE 613
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R + Q+ + +A EA+ +F+ LMG +V+ R+ I+ ANLV NLD
Sbjct: 614 TTMDPEKRTVLQVHLREAEEADSIFTILMGDKVEPRRRFIEEHANLVRNLD 664
>gi|418618874|ref|ZP_13181726.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
gi|374826443|gb|EHR90340.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
Length = 640
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 331/642 (51%), Positives = 437/642 (68%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 125 SVVNALSQELEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 181 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|365173766|ref|ZP_09361472.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
gi|363616789|gb|EHL68216.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
Length = 647
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/656 (48%), Positives = 447/656 (68%), Gaps = 28/656 (4%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
I A + + Y ++ I VLEGLEAVRKRP MYIG RGLHHLVYE++DN++DE+
Sbjct: 6 IPANAQQNGANASDYTAKDIHVLEGLEAVRKRPGMYIGDQSQRGLHHLVYEVVDNSIDES 65
Query: 123 QAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AG+ I+V + D S IP ++H + KSA E VLTVLHAGGKF S Y
Sbjct: 66 LAGFCDTIDVTINIDGSVTVVDNGRGIPTEMH-ESGKSAAEVVLTVLHAGGKF--DKSAY 122
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
VSGGLHGVG+SVVNALS LE+T+WR+G EYHQ+Y RG P+T L V + +GT
Sbjct: 123 QVSGGLHGVGVSVVNALSVWLELTIWRNGKEYHQRYERGIPMTGLEA----VGDTELRGT 178
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
R++F PD+++F+T +F + + R+RELAFLN +TI ED PEK + Y + GG
Sbjct: 179 RVQFMPDEEIFSTT-EFQADILKQRLRELAFLNSHITINF--EDLRPEKPEKKSYNYPGG 235
Query: 294 LEEYVQWLNTDKKPLHD---VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 350
+ +V++LN K+ L ++ KD +D+A+Q+ +D Y + + G+ N I TI+G
Sbjct: 236 ISSFVEYLNKGKEVLFKGPMIISGEKD--QTQVDVAIQY-NDTYLERLYGFVNLINTIEG 292
Query: 351 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 410
GTH+ G ++++TR +N +K K +K+KD +LSG+ ++EGLT +ISV+V P+FEGQTKT
Sbjct: 293 GTHVAGFRSAMTRAINDEARKLKILKEKDNNLSGDDLKEGLTAVISVKVMEPQFEGQTKT 352
Query: 411 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 470
+LGN +V+ +VD V E L L+ P++L I+ +L A +A AAK+A++LVR+KS++
Sbjct: 353 KLGNNDVKGIVDSIVYEGLKNALDERPEILKPIVESALRARQAREAAKKAKELVRRKSIM 412
Query: 471 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 530
+LPGKL+DCS+ P + EI+IVEGDSAGGSAKQGR+R FQAILPLRGKILNVE+
Sbjct: 413 SGLTLPGKLSDCSNRNPADCEIYIVEGDSAGGSAKQGRNREFQAILPLRGKILNVEKARL 472
Query: 531 AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQ 590
+ +E I+N+I ALG GV G+DF E LRYHKI I+ DADVDGAHIRTLLLT F+RY
Sbjct: 473 EKILSSETIRNIILALGCGV-GDDFNDEKLRYHKIFIMADADVDGAHIRTLLLTLFFRYM 531
Query: 591 KTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMP 650
+ ++G +YV PPL++V+ GK V YC+ + E+K+ ++ + +QR+KGLGEM
Sbjct: 532 PQIIEKGYLYVAQPPLFRVQCGKDVTYCFSEKEMKEAQNKANGKKV-DVQRYKGLGEMNA 590
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
QLWETT+NPE R++ ++ ++DA EA+ +F LMG V+ R++ I+ V NLD
Sbjct: 591 EQLWETTMNPENRIINRVEVQDAVEADELFGILMGDVVEPRRKFIEQFGKEVKNLD 646
>gi|418328445|ref|ZP_12939557.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
gi|365231970|gb|EHM72986.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
Length = 643
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEIREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|242243251|ref|ZP_04797696.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|416127533|ref|ZP_11596941.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|418631677|ref|ZP_13194129.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|420176465|ref|ZP_14682885.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|420178304|ref|ZP_14684636.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|420180889|ref|ZP_14687098.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|420192455|ref|ZP_14698314.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|420200868|ref|ZP_14706507.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
gi|242233200|gb|EES35512.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|319399910|gb|EFV88156.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|374834345|gb|EHR97993.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|394241009|gb|EJD86430.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|394246494|gb|EJD91750.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|394248368|gb|EJD93606.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|394261185|gb|EJE05985.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|394267464|gb|EJE12054.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
Length = 643
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|307243405|ref|ZP_07525562.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
gi|306493215|gb|EFM65211.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
Length = 635
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 333/640 (52%), Positives = 439/640 (68%), Gaps = 22/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG S I +++
Sbjct: 6 YGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSEIYISINP 65
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+++HP T S LETVLTVLHAGGKFGG S LHGVG+SVV
Sbjct: 66 DGSVTVKDDGRGIPVEVHPKTGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ L V RDG Y Q+Y RG P L V+ SKD GT I F PD +F
Sbjct: 124 NALSDWLVAEVSRDGKVYRQEYKRGVPTGKL--EVVSESSKD-SGTSITFMPDASIFD-E 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I+F + T+ R REL+FLN + I ED + + + + GGL EY+++LN K P
Sbjct: 180 IEFKYETLEYRFRELSFLNKVIKIEF--EDKREGQEESKTFHYTGGLVEYIKYLNRTKTP 237
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+HD ++ K + TI+LALQ+ +DAY++ + +AN+I T +GG H+ G KA+LT+ +N
Sbjct: 238 IHDQIIYVDKIANDCTIELALQY-TDAYTENIYSFANNINTHEGGVHLSGFKAALTKCVN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++ +K+KD +LSGE +REGLT I+SV++P+P+FEGQTKT+LGN +R +VD
Sbjct: 297 DYARRNNILKEKDPNLSGEDIREGLTAIVSVKLPDPQFEGQTKTKLGNTFMRGLVDSIAN 356
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +LE +P V ++ K L A +A AAK+ARDL R+K+ L +SLPGKLADCS +
Sbjct: 357 EEIGAFLEENPSVAKLVIEKCLRAQRAREAAKKARDLTRRKNALEFTSLPGKLADCSEKS 416
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEIF+VEGDSAGGSAK GRDR QAILPLRGKILNVE+ + +EEI+N+I A
Sbjct: 417 PEKSEIFLVEGDSAGGSAKSGRDRNIQAILPLRGKILNVEKSRLDKILSSEEIKNMITAF 476
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF+ E LRYHKI+I+TDADVDGAHIRTLLLTFF+RY + L + G +Y PPL
Sbjct: 477 GCGI-GEDFEPEKLRYHKIVIMTDADVDGAHIRTLLLTFFFRYMRPLIEGGYVYAAQPPL 535
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+KV++GK+ Y + D EL + + R+KGLGEM QLWETT++PE R L
Sbjct: 536 FKVKKGKKEYYAFSDNELSSLLDEVGRQGA-DVSRYKGLGEMNAEQLWETTMDPESRTLL 594
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ I+DA A+ +FS LMG +V R++ I+ NA + NLD
Sbjct: 595 QVTIDDAIMADEIFSMLMGDKVAPRRDFIEANAKYVTNLD 634
>gi|418412794|ref|ZP_12986045.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
gi|410883855|gb|EKS31687.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
Length = 643
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ Y+ LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYIDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|336252328|ref|YP_004595435.1| DNA gyrase subunit B [Halopiger xanaduensis SH-6]
gi|335336317|gb|AEH35556.1| DNA gyrase, B subunit [Halopiger xanaduensis SH-6]
Length = 646
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 313/638 (49%), Positives = 435/638 (68%), Gaps = 21/638 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + +G+PV + V ++ + GT +RFWPD +F A
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEQGEPVGDME-RVRDMEPDEETGTEVRFWPDTGIFE-A 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----DSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F +T+A R+RELAFLN + I LR E D+D E Y + GG+ E+V++LN
Sbjct: 183 GEFSFSTLANRLRELAFLNSGVRITLRDEREDAGDADEEGPVEETYEYEGGIREFVEYLN 242
Query: 303 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ +HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +L
Sbjct: 243 ETRSAMHDDVIYFEDEEQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTAL 301
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRT+N ++ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V
Sbjct: 302 TRTVNDYANENSMLSDLDNNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIV 361
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ ++ E L Y E +PD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLAD
Sbjct: 362 ESAMHEGLGTYFEENPDTAEAIINKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLAD 421
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C + P+E+E+FI EGDSAGGSAKQ R+ FQA+LP+RGK+LNVE+ + +N++I+N
Sbjct: 422 CQTKDPDEAELFIAEGDSAGGSAKQARNPEFQAVLPIRGKVLNVEKHRLDRVLENDQIRN 481
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A+G GV G++F E +RY K+I+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 482 IITAIGAGV-GDEFDLEDVRYKKVIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYA 540
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY++ + D E ++ + +QRFKGLGEM P QLW+TT++P
Sbjct: 541 TQPPLYRIRYRGETYDAMTDQERDEIIEEKCDGSPSQVQRFKGLGEMNPQQLWDTTMDPS 600
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LKQ+ +EDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 601 NRILKQITVEDAAAADKMFSVLMGDAVEPRKQFIKENA 638
>gi|282855958|ref|ZP_06265249.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
gi|282586177|gb|EFB91454.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
Length = 632
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 323/645 (50%), Positives = 442/645 (68%), Gaps = 26/645 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E IQ+LEGL+ VRKRP MYIG T RGLHH VYE++DN+VDEA G+ S I V
Sbjct: 1 MSTQYTAEDIQILEGLDPVRKRPGMYIGDTTTRGLHHCVYEVVDNSVDEALGGFCSEITV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD S IP+D HP+ + ALE VLTVLHAGGKF + Y +SGGLHGVG
Sbjct: 61 TLHADQSVSVSDNGRGIPVDPHPSNGRPALEVVLTVLHAGGKF--DNHNYKISGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LEVTV+RDG E+H+++ RG PV+ LT ++GT + F PD ++
Sbjct: 119 VSVVNALSEWLEVTVYRDGREWHERFERGTPVSGLTGGT----PTAKRGTTVTFRPDAEI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F + F T+ R RE+AFL P L D + + Y + GG+ E+V ++N
Sbjct: 175 FDE-VAFSAETLGNRFREMAFLIPGLKFIF----VDEAEGKTWTYHYEGGVSEFVAYINK 229
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ L + R + DG+ ++ Q+ +D Y + + +AN I TI+GGTH+ G++++LT
Sbjct: 230 GKQTLTPRPIVIRGEKDGVAVEAGFQY-TDEYIERLYSFANLINTIEGGTHVAGLRSALT 288
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +++ +K+KD +LSG+ +REGLTC++SV++ NP+FEGQTKT+LGN V+ +VD
Sbjct: 289 RGINEGARRAGVLKEKDENLSGDDLREGLTCVLSVKLGNPQFEGQTKTKLGNGNVKGIVD 348
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ + + + LE P V+ I+ K++ A +A AAK+AR+LVR KS L SLPGKLADC
Sbjct: 349 SLLYDGILQALEEDPSVIKPIIEKAIKARQAREAAKKARELVR-KSALSGLSLPGKLADC 407
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS T E E++IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ M ++EI+ +
Sbjct: 408 SSRTAENCEVYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARMDKMLGSKEIRVI 467
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I+ALG G+ GEDF LRY+KIII+TDADVDGAHI TLLLTFF+R+ + L ++G +Y
Sbjct: 468 IQALGCGI-GEDFDIGKLRYNKIIIMTDADVDGAHISTLLLTFFFRHMRELIEKGHVYQA 526
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA-LYSIQRFKGLGEMMPVQLWETTLNPE 661
VPPLY+V+ GK+V Y Y D EL+K ++ ++QR+KGLGEM P QLWETT++P
Sbjct: 527 VPPLYRVQVGKKVDYLYSDKELRKFMDGLAADGKKAAVQRYKGLGEMNPGQLWETTMDPA 586
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+LKQ+ ++D A A+ F LMG RV+ R++ I Q+A + NLD
Sbjct: 587 TRLLKQIELDDLAGADEYFDILMGDRVEPRRQFIEQHAHEVHNLD 631
>gi|317478438|ref|ZP_07937599.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
gi|316905397|gb|EFV27190.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
Length = 653
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 317/650 (48%), Positives = 447/650 (68%), Gaps = 29/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 SYSAENIQVLEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDYHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+YS G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYSCGHPLYS----VKEVGTTDITGTRQQFWPDGTIFTE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 304
+ ++++ +A R+RELA+LN + I+L D E N E F++ GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSS 244
Query: 305 KKP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ ++DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHFMNDVIYINTEKQGTPVEVAIMYNT-SYNENVHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E LT YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
+ALG+ GV GED K+ + LRY KIII+TDADVDG+HI TL++T F+RY + +GC
Sbjct: 484 QALGIRFGVDGEDSKEANIDKLRYKKIIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGC 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWE
Sbjct: 544 LYIATPPLYLCTKGKAKEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWE 602
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE RMLKQ+ +E+AAEA+ +FS LMG V R++ I+ A N+D
Sbjct: 603 TTMNPENRMLKQVHLENAAEADYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|418615337|ref|ZP_13178282.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|418634910|ref|ZP_13197301.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|420166072|ref|ZP_14672760.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|420190648|ref|ZP_14696589.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|420205714|ref|ZP_14711237.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|420209623|ref|ZP_14715059.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|420211483|ref|ZP_14716842.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|420235726|ref|ZP_14740262.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
gi|374817511|gb|EHR81691.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|374836452|gb|EHS00040.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|394234127|gb|EJD79712.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|394258581|gb|EJE03461.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|394269399|gb|EJE13933.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|394278520|gb|EJE22835.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|394280818|gb|EJE25089.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|394302395|gb|EJE45840.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
Length = 643
Score = 617 bits (1590), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTVIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|251794042|ref|YP_003008773.1| DNA gyrase subunit beta [Paenibacillus sp. JDR-2]
gi|247541668|gb|ACS98686.1| DNA gyrase, B subunit [Paenibacillus sp. JDR-2]
Length = 635
Score = 617 bits (1590), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/641 (51%), Positives = 436/641 (68%), Gaps = 23/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 6 TYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEVVDNSIDEALAGYCTKIQVRVH 65
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + KS LE V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 66 EDNSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE + VTV G Y Q+Y RG P V + D GT ++F PD ++FT
Sbjct: 124 VNALSEHVTVTVKLHGNVYQQEYRRGVP----QYDVKIIGESDETGTTVKFKPDPEIFTD 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+++ T+ RIRELAFLN L I L D N + + GG+ E+V+ LN +K+
Sbjct: 180 TTVYEYETLQSRIRELAFLNKGLEIEL----IDERTGTSNSFKYDGGIIEFVKHLNRNKE 235
Query: 307 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+H+ + D I ++++LQ+ +D Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 236 VMHEEPIYVEGSKDHIQVEVSLQY-NDGYTENIHSFANNINTHEGGTHESGFKSALTRII 294
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K+ +KD D + SG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 295 NDYARKTGLIKDNDSNFSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESFF 354
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L E+L+ +P V I+ K L A +A AA++AR+L R+KS L SSLPGKLADCSS
Sbjct: 355 AEKLQEFLDENPSVSRKIVEKGLQAARAREAARKARELTRRKSALEVSSLPGKLADCSSK 414
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVER + N EI+ +I A
Sbjct: 415 DASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVERARLDRILGNAEIRAIITA 474
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ G+DF RYHK+II+TDADVDGAHIRTL+LTFF+RY + + + G IY+ PP
Sbjct: 475 LGTGI-GDDFDLAKARYHKVIIMTDADVDGAHIRTLMLTFFFRYMRKIIEAGYIYIAQPP 533
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+K+ER K ++Y + E +++ + F A ++QR+KGLGEM QLWETT++PE R +
Sbjct: 534 LFKIERNKVIRYAQSEKEREEIIAEFGEGAKVNVQRYKGLGEMNATQLWETTMDPESRTM 593
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
Q+ IEDA EA+V+F +LMG V+ R++ IQ A ++ NLD
Sbjct: 594 LQVSIEDAIEADVIFDTLMGDNVEPRRDFIQQFAKDVKNLD 634
>gi|167043616|gb|ABZ08310.1| putative DNA gyrase B, partial [uncultured marine microorganism
HF4000_APKG2M17]
Length = 655
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/650 (49%), Positives = 442/650 (68%), Gaps = 21/650 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN S YG+ IQVLEGLEAVRKRPAMYIG GPRGLHHLV E++DN++DEA AG+
Sbjct: 12 ENEASNQYGASNIQVLEGLEAVRKRPAMYIGDIGPRGLHHLVNEVVDNSIDEALAGHCDA 71
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V + D SI P+D+HP +SALE V+T LHAGGKF + Y VSGGLH
Sbjct: 72 IDVIIHEDGSISIKDNGRGIPVDMHPIEKRSALEVVMTTLHAGGKFDKDT--YKVSGGLH 129
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+S VNALSE LE ++WRDG + Q + G PV + V + + GT +RFWPD
Sbjct: 130 GVGVSCVNALSEKLEASIWRDGALWKQTFEYGDPVGAV-AKVRDMKDGESTGTLVRFWPD 188
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+F T +F + +A R+RE+A+LN + I++ ED + +EY F GG+ E+V++
Sbjct: 189 GGIFQTT-EFRFDRLADRLREMAYLNRHVYISI--EDLREAEGLRDEYHFEGGIIEFVEY 245
Query: 301 LNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
L+ + P+HD + D D + +++A+++ S Y++ +L + N+I T +GGTH+ G +
Sbjct: 246 LDEARTPIHDETIYIADEDAEVPVEMAMRYNS-GYTENVLSFVNNINTHEGGTHVSGFRR 304
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL S K+ +K+ + LSG+ REG+T I+S++V P+FEGQTKT+LGN EV+
Sbjct: 305 ALTRTLKSYADKNNLLKNVKVDLSGDDFREGITVILSIKVAEPQFEGQTKTKLGNSEVQG 364
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+ V L E+L+ HP I+ K + A +A AA++AR+LV++K+ S LPGKL
Sbjct: 365 AVESLVFLKLGEWLDDHPKESKRIVEKVIIAAEARAAARKARELVQRKNAFSSGGLPGKL 424
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS EE EI++VEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ + NEEI
Sbjct: 425 ADCSSKNAEECEIYLVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARLDRILANEEI 484
Query: 540 QNLIRAL--GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+N++ AL GLG +DF E LRYHKII++TDADVDGAHIRTLLLTF YR+ L + G
Sbjct: 485 RNIVTALGTGLGAGEDDFDPEKLRYHKIIVMTDADVDGAHIRTLLLTFLYRHMHALVEAG 544
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA--LYSIQRFKGLGEMMPVQLWE 655
IY+ PPLYK ++GKQ +YC+ D +LK+V ++ +IQR+KGLGEM P QLW+
Sbjct: 545 YIYIAQPPLYKAKKGKQEEYCWTDKQLKEVIERIGGDSPEKVTIQRYKGLGEMNPDQLWD 604
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R+L+++ I+DAA A+ +FS+LMG V+ R++ I+ A +D
Sbjct: 605 TTMNPETRLLQRITIDDAAAADRIFSTLMGDAVEPRRKFIERNAKYATID 654
>gi|402829788|ref|ZP_10878661.1| DNA gyrase, B subunit [Slackia sp. CM382]
gi|402283455|gb|EJU31969.1| DNA gyrase, B subunit [Slackia sp. CM382]
Length = 648
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/649 (50%), Positives = 432/649 (66%), Gaps = 25/649 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGL+ VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V +
Sbjct: 9 YDGRDIQVLEGLKPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGFCNKIDVTIHE 68
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D HP +E VLT LHAGGKFGG GY VSGGLHGVG+S V
Sbjct: 69 DNSVTVVDDGRGIPVDKHPKEKIPTVEVVLTKLHAGGKFGGE--GYKVSGGLHGVGVSCV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +EV V RDG Y + RG VTT + DSK + GT + FWPD ++FT
Sbjct: 127 NALSTRMEVDVCRDGSRYRIVFERG--VTTEKLKRIG-DSK-KTGTTVTFWPDPEIFTDT 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+D++ + R RE+AFLN L I + E D D E N + + F +AGG+ ++V++LN K
Sbjct: 183 TVYDYSILQNRFREMAFLNRGLHIEMHDERDLDEEGNPHTDSFQYAGGIVDFVKYLNNGK 242
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ L+ + F + T+++A+QW + ++ + +AN+I T +GGTH+EG K +LTRT+
Sbjct: 243 ETLNKPIYFEAENKDGTVEIAMQWTTSYSANGVEAFANNINTTEGGTHLEGFKNALTRTI 302
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N + +K+KD +L+G+ REGL+ +ISV++ P+FEGQTKT+LGN E+R +V +V
Sbjct: 303 NDYARAKGLLKEKDSNLTGDDAREGLSAVISVKLHEPQFEGQTKTKLGNTEIRGLVQGAV 362
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L EYLE +P I++K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS
Sbjct: 363 TKGLAEYLEENPTPAKRIVNKASQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSR 422
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P EIFIVEGDSAGGSAKQ RDR++QAILPLRGKILNVER ++ I +LI A
Sbjct: 423 DPSACEIFIVEGDSAGGSAKQARDRKYQAILPLRGKILNVERAGLHRALSSDTISSLITA 482
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + GED+ E RYH+III+TDADVDGAHIR LLLTFFYRY L + G +Y+ PP
Sbjct: 483 IGTNI-GEDYDGEKARYHRIIIMTDADVDGAHIRCLLLTFFYRYMPDLINRGYVYIAQPP 541
Query: 606 LYKVER-----GKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
LY +++ GK ++Y Y+D ++ + + Y +QR+KGLGEM P QLWETT+ P
Sbjct: 542 LYGLKKKNSASGKILKYIYNDEAKDELVAKLENPDKYEMQRYKGLGEMDPQQLWETTMEP 601
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
E R L Q+ IEDA A + S LMG V+ RKE IQ A V LDI
Sbjct: 602 ETRTLLQVDIEDAVAAELAVSELMGELVEPRKEFIQKHARDVRF--LDI 648
>gi|338731010|ref|YP_004660402.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
gi|335365361|gb|AEH51306.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
Length = 630
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 434/643 (67%), Gaps = 26/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E IQ+L+GLE VR RP MYIGSTG GLHHLVYEI+DN+VDEA AG+ I+V+L
Sbjct: 4 YTAESIQILKGLEPVRARPGMYIGSTGKSGLHHLVYEIIDNSVDEALAGFCDTIKVSLHE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D HP T KSALE V+T LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 64 DGSVEVEDNGRGIPVDPHPETGKSALEVVMTTLHAGGKF--SKDAYKVSGGLHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +EV V RDG+ Y+Q YSRGKP+ C V V +++GT +RF PD ++F+T
Sbjct: 122 NALSEKMEVWVHRDGLIYYQAYSRGKPL----CEVTVVGKTNKRGTIVRFKPDPEIFST- 176
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKK 306
++FD + I ++RELA+LN L I + + N Y E Y + GG+ EYV++L ++K
Sbjct: 177 VEFDPDIIQTKLRELAYLNVGLKIIF-----EDKINGYTEVYQYKGGISEYVRYLAGNRK 231
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+V+ + + + +D+A+ + D + YAN+IRT+D GTH+ K ++T+ N
Sbjct: 232 MLHEVIRISGEWEDVKVDVAMVYTDSQEQDLIYSYANTIRTVDHGTHVTAFKNAITKLFN 291
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K +K KD S GE VREGL ++SV + NPEFEGQTK +LG+ V + V+
Sbjct: 292 EYAKSLGILK-KDESFQGEDVREGLIAVVSVLLKNPEFEGQTKAKLGSEIAGVAVSKVVR 350
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E LTEY E++ L IL + A++A AAK+ARDLVR+K+ L +S+LPGKLADC ST
Sbjct: 351 EKLTEYFEINKATLKIILERIAQAMRAREAAKKARDLVRRKNALENSALPGKLADCVSTD 410
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
E+SE+FIVEGDSAGGSAKQ RDR FQA+LP+RGKILNVE+ + NE+I+++I A+
Sbjct: 411 LEKSELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSIHKLLNNEQIKDIIVAI 470
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+ F + LRY KIII+TDAD+DGAHIRTLLLTFF+RY + L +EG +++ VPPL
Sbjct: 471 GTGI-GDKFDRSRLRYGKIIIMTDADIDGAHIRTLLLTFFFRYMRPLIEEGRVFIAVPPL 529
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV ++ Y Y + E +K KS +QR+KGLGEM P QLWETT+NP+ R +
Sbjct: 530 YKVSVNGKIYYLYSEEEYEKFKSQLKEGTKIEVQRYKGLGEMNPEQLWETTMNPQTRKMI 589
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
++ IEDA EA+ +F+ LMG R+ I+ A + + +LD+
Sbjct: 590 KVTIEDAEEADTLFNILMGENTAERRSFIERHA--LKVTYLDV 630
>gi|302390804|ref|YP_003826624.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302202881|gb|ADL11559.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 639
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/636 (51%), Positives = 443/636 (69%), Gaps = 22/636 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVRKRP MY+G TG RGLHHLVYE++DN++DEA AGY NIEV +
Sbjct: 11 YDADQIQVLEGLEAVRKRPGMYVGGTGARGLHHLVYEVVDNSIDEALAGYCDNIEVIIEP 70
Query: 137 DN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
N IPI HP NK A+E V+TVLHAGGKF + GY VSGGLHGVG+SVV
Sbjct: 71 GNVVTVIDDGRGIPISSHPNLNKPAVEIVMTVLHAGGKF--DNEGYKVSGGLHGVGVSVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RD YHQ+Y G PV LT + GT I+F PD ++F +
Sbjct: 129 NALSEWLEVEVMRDNKIYHQRYEEGVPVKDLTV----IGESQASGTMIKFKPDLEIFES- 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I F++ + R++ELA+LN + I ++ + D K +Y GG+ +VQ LN +K P
Sbjct: 184 IDFEYKKLIKRLKELAYLNKGIKIEIKDKRRDEIKTDIFQY--DGGIVSFVQELNENKDP 241
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + F + + I++A+Q+ ++ Y D + +AN+I T +GG H+ G K++LTRT+N
Sbjct: 242 IHEEPIYFETEEEDNHIEVAIQY-NETYVDNIFTFANNINTHEGGNHLSGFKSALTRTIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ +K+ D +LSG+ +REG+ I++V++P+P+FEGQTKT+L N EVR +VD V
Sbjct: 301 DYARRHDYLKEDDSNLSGDDIREGIVAIVNVKLPDPQFEGQTKTKLANSEVRGIVDSVVS 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +LE P++ I+ K++ A +A AAK+AR+L R+KS L S++LPGKLADCSS
Sbjct: 361 ENLDRFLEEDPEIGSIIVQKAIKAAEARKAAKKARELTRRKSALTSTALPGKLADCSSRD 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEESE++IVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + N EI++LI AL
Sbjct: 421 PEESELYIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARLNKILNNNEIRSLITAL 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F E RY KIII+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPL
Sbjct: 481 GTGI-GKEFDMEQARYKKIIIMTDADVDGAHIRTLLLTFFYRYMRPLLEAGNIYIAQPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV +G++ Y Y+D +L+++ + + + SIQR+KGLGEM P QLWETT++PE R
Sbjct: 540 YKVNKGRKEYYVYNDRKLEELLNEIGRSGI-SIQRYKGLGEMNPKQLWETTMDPENRTTL 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
Q+ IEDA A+ +F++LMG +V R++ IQ A V
Sbjct: 599 QVQIEDAVMADDIFTTLMGDKVAPRRKFIQKHAKEV 634
>gi|374294499|ref|YP_005044690.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
gi|359823993|gb|AEV66766.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
Length = 641
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/645 (51%), Positives = 441/645 (68%), Gaps = 23/645 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V+ +Y IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY IE+
Sbjct: 7 VNNSYDESNIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIMDNSIDEALAGYCDEIEI 66
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+ +HP +E V T+LHAGGKFGG GYSVSGGLHGVG
Sbjct: 67 TINPDNSITNIDNGRGIPVGIHPKMGIPTVEVVHTILHAGGKFGGE--GYSVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV V+R+G Y Q+Y RGK V+ L + DR GT+ F PD +
Sbjct: 125 ASVVNALSEYLEVEVYREGNIYRQRYERGKVVSKLEV----IGKTDRTGTKTTFKPDPLI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I+FD+ T+ R RELAFLN LTI L D E+ E + GG+ +V+ LN
Sbjct: 181 FE-KIEFDYETLLNRFRELAFLNKGLTIRLI--DKRKEEPVVKELHYEGGIISFVEHLNR 237
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ +H + F DG +++A+Q+ +D Y++ + +AN+I T +GGTH+ G K ++T
Sbjct: 238 NKEVIHQPPIYFESLKDGNHVEIAMQY-NDTYNENIYSFANNIATTEGGTHLTGFKTAIT 296
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+ N +K +K+ D +L GE VREGLT +ISV++ P+FEGQTKT+LGN E+R +V+
Sbjct: 297 KVFNDYCRKYNYLKENDKNLLGEDVREGLTAVISVKLHEPQFEGQTKTKLGNSEIRSLVE 356
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+V E L+ +LE +P + +I+ KS++A +A AA++AR++ R+KS L S++LPGKLADC
Sbjct: 357 NAVSEKLSAFLEENPSIAKAIVEKSITAARAREAARKAREMTRRKSALESTTLPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P EI+IVEGDSAGGSAKQGRDRRFQAILPL GK+LNVE+ +Y NE++ +
Sbjct: 417 SEKDPSLCEIYIVEGDSAGGSAKQGRDRRFQAILPLWGKMLNVEKSRIDKVYTNEKLLPV 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG + GEDF E LRYHKIII+ DADVDG HIRTLLLTF YRY + L + G +Y+
Sbjct: 477 ITALGANI-GEDFDIEKLRYHKIIIMADADVDGQHIRTLLLTFLYRYMRPLVEGGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPL+K+ +GK+ Y Y++ +L+K+ +IQR+KGLGEM P QLWETT+NP+
Sbjct: 536 QPPLFKITKGKEEVYAYNEKQLEKILNEKGWKKGECTIQRYKGLGEMNPEQLWETTMNPK 595
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R + ++ ++DA A+ +FS LMG +V+ RKE IQ NA ++ NLD
Sbjct: 596 TRSMLRVELKDAIAADEIFSILMGEKVEPRKEFIQANAKDVTNLD 640
>gi|410672047|ref|YP_006924418.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
gi|409171175|gb|AFV25050.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
Length = 634
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/641 (50%), Positives = 447/641 (69%), Gaps = 26/641 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AG+ + I+V +
Sbjct: 7 YDASNIQVLEGLEAVRKRPSMYIGSVDGRGLHHLVYEVVDNSIDEALAGFCTEIDVTINE 66
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ DN IP+ P NKSALE V+T+LHAGGKF S+ Y VSGGLHGVG+SVV
Sbjct: 67 EGTVTVQDNGRGIPVGNLPKYNKSALEVVMTILHAGGKFDKST--YKVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG Y+Q+Y RGKP ++ + + GT+I F PD +F T
Sbjct: 125 NALSEWLEAEVKRDGKLYYQRYERGKP----HDDIMEIGESEGTGTKITFKPDPLIFETT 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F ++T+ R+RELAFLN + I++ D E+ Q + + GG+ +V++LN +
Sbjct: 181 -KFVYDTLVTRLRELAFLNKGIKISI--SDLRIEQPQQEVFQYEGGIVSFVKYLNHSRNV 237
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + F ++ +G +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LTR N
Sbjct: 238 LHESPIYFEREKEGTVVEIAMQY-TDSYAEYVYSFANNINTHEGGTHLVGFKAALTRVAN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K K +D LSGE +REGLT IISV++ P+FEGQTKT+LGN +V+ +V+ V
Sbjct: 297 DYIRQNKMAKGED-KLSGEDIREGLTAIISVKITEPQFEGQTKTKLGNSDVKGIVESMVS 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+EY+E +P V ++IL K+L A +A AAK+AR+L R+K+ L S+LPGKLADCS
Sbjct: 356 EGLSEYMEENPKVANAILQKALDAQRAREAAKKARELTRRKNALDISTLPGKLADCSEKD 415
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P EI++VEGDSAGGSAKQGR+RRFQAILP RGKILNVE+ A + KN E+ +LI A+
Sbjct: 416 PSLCEIYLVEGDSAGGSAKQGRNRRFQAILPFRGKILNVEKARLAKVLKNNEVLSLITAM 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+D+ + RYHK+II+TDADVDGAHIRTL+LT F+R+ K L D G IY+ PPL
Sbjct: 476 GTGI-GDDYNLDKARYHKVIIMTDADVDGAHIRTLILTLFFRHMKPLIDAGYIYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
Y+V +GK Y Y D EL+ K++ N IQR+KGLGEM P QLWETT+NPE R L
Sbjct: 535 YRVAKGKAEYYVYSDRELQAKLQELGDKNV--GIQRYKGLGEMNPEQLWETTMNPETRTL 592
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ ++DA A+ +FS LMG V+ R+ I +A ++VNLD
Sbjct: 593 LRVTMDDAIAADEMFSILMGDEVEPRRNFITTHARDVVNLD 633
>gi|340751288|ref|ZP_08688109.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
gi|229421601|gb|EEO36648.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
Length = 635
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/645 (50%), Positives = 438/645 (67%), Gaps = 23/645 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY ++IEV
Sbjct: 1 MSNNYQAEDITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++L DN IP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 SILPDNVIEVVDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS EV V ++G ++QKY+RG P V + + GT +RF D ++
Sbjct: 119 VSVVNALSLWTEVEVRKNGKVWYQKYNRGIPEEA----VKEIGITEEHGTTVRFKADHEI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T + +D+NT+ R++ELA+LN L I L +P K + E F GG+ ++++ +
Sbjct: 175 FETLV-YDYNTLKNRLKELAYLNKGLVITLTDSRKEPFKKEIFE--FEGGIADFLREITE 231
Query: 304 D-KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
D +K + + + +VD I +++A + + S+ + + N+I T +GGTH++G + +LT
Sbjct: 232 DTEKLIKEPIYMTGEVDNIGVEIAFLYTVNQ-SEIIYSFVNNINTHEGGTHVQGFRTALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +GK +KDKD L G +REG+T I+SV+VP P+FEGQTKT+LGN EV +V
Sbjct: 291 RIINDVGKAQGLLKDKDGKLQGTDIREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVS 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V L LE +P+ I+ K L++ KA AA+RAR+LV +KS L SLPGKLADC
Sbjct: 351 TVVGGQLKMILEDNPNDTKVIIEKILNSKKAREAAQRARELVLRKSALEVGSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE EI+IVEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +N E++ +
Sbjct: 411 SSKNPEECEIYIVEGDSAGGSAKQGRDRYHQAILPLRGKILNVEKAGLHKALENNEVRAM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F E LRY KII++TDADVDGAHIRTLLLTF YRY L G +++
Sbjct: 471 ITAFGTGI-GDNFNIEKLRYGKIILMTDADVDGAHIRTLLLTFIYRYMIELIYNGNVFIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK+ GKQ++Y Y D ELK++ +F + Y++QR+KGLGEM P QLWETT++P+
Sbjct: 530 QPPLYKISYGKQIKYAYSDRELKEITEAFEGEDKKYTLQRYKGLGEMNPEQLWETTMDPQ 589
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R L ++ I+DA A+++F LMG +VD R+E I +NA + NLD
Sbjct: 590 NRTLLKVTIDDARAADMLFDKLMGDKVDPRREFIEENAEYVKNLD 634
>gi|220927465|ref|YP_002504374.1| DNA gyrase subunit beta [Clostridium cellulolyticum H10]
gi|219997793|gb|ACL74394.1| DNA gyrase, B subunit [Clostridium cellulolyticum H10]
Length = 642
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/643 (51%), Positives = 442/643 (68%), Gaps = 25/643 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+ N++DEA AG I+V +
Sbjct: 10 YDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVANSIDEALAGRCDIIKVIVHK 69
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+ +HP LE V T+LHAGGKFG S YSVSGGLHGVG SVV
Sbjct: 70 DNSVTVTDNGSGIPVGIHPKMGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGASVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSES+EV V R+G Y QKYSRGKP+T++ V D GT F PD ++F
Sbjct: 128 NALSESMEVEVKREGHIYRQKYSRGKPLTSVDI----VGDTDETGTITTFKPDPEIFE-E 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I +D + + R RE+AFLN + I L D PE++ + GG+ +V++LN K+P
Sbjct: 183 IVYDFDAMISRYREMAFLNKGINIKLI--DERPEESVEKNLHYEGGIISFVEYLNKSKEP 240
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ D +++A+Q+ +D+Y++++ YAN+I T +GGTH+ G +A++T+ LN
Sbjct: 241 LHDEVIYLEGSRDANIVEVAMQY-NDSYNESVFTYANNIATTEGGTHLTGFRAAITKVLN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K +K+ D +LSGE VREGLT ++SV++P P+FEGQTKT+LGN E+R +V+ V
Sbjct: 300 DYARKFNILKENDKNLSGEDVREGLTAVLSVKLPEPQFEGQTKTKLGNSEIRTLVENVVS 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ L +LE HP V IL KS++A +A AA++AR+L R+KS + SS+LPGKLADCS
Sbjct: 360 DKLFIFLEEHPAVAKIILDKSITAARAREAARKARELTRRKSAMDSSTLPGKLADCSEKD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P ++EIFIVEGDSAGGSAKQGRDR+ QAILPL GK+LNVE+ +Y NE++ +I AL
Sbjct: 420 PTKTEIFIVEGDSAGGSAKQGRDRKIQAILPLWGKMLNVEKSRMDKVYDNEKLSPVIIAL 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F LRY KIII+ DADVDG+HIR LLLTFF+RY + L ++G +Y+ +PPL
Sbjct: 480 GAGI-GDEFDTSKLRYDKIIIMADADVDGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKV---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
+KV +GK+ Y YDD EL K+ + + +IQRFKGLGEM P QLWETT+NPE R
Sbjct: 539 FKVYKGKEEYYAYDDIELDKIFKERGWRKDDPNVNIQRFKGLGEMNPDQLWETTMNPETR 598
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ ++ +EDA A+ VF MG +V+ R+E IQ +A ++ NLD
Sbjct: 599 TIIKVDLEDAISADEVFCKFMGDKVEPRREYIQMHARDVSNLD 641
>gi|169830224|ref|YP_001716206.1| DNA gyrase subunit B [Candidatus Desulforudis audaxviator MP104C]
gi|169637068|gb|ACA58574.1| DNA gyrase, B subunit [Candidatus Desulforudis audaxviator MP104C]
Length = 635
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 443/644 (68%), Gaps = 32/644 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E IQVLEGLEAVRKRP MYIGSTGP+GLHHL++E++DN++DEA AG+ IEV + A
Sbjct: 8 YRAEDIQVLEGLEAVRKRPGMYIGSTGPKGLHHLIFEVVDNSIDEALAGFCDYIEVVIHA 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D+HP + ALE VLT LHAGGKFGG+ Y +SGGLHGVG+SVV
Sbjct: 68 DNSVTVSDNGRGIPVDIHPQVGRPALEVVLTRLHAGGKFGGTQ--YKISGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +EV V R+G Y Q++ RG L +D D GTR+ F PD +F
Sbjct: 126 NALSRRMEVEVKREGYRYRQEFERGLATGELEL----LDEADETGTRVTFIPDPDIFEE- 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++F ++ +A R+REL+FLN +T+ LR E + +K Y +AGG+ ++V+ LN K+
Sbjct: 181 VEFQYDVVAKRLRELSFLNAGVTLVLRDERTGRDKV----YQYAGGIRDFVRHLNLHKEV 236
Query: 308 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L D + +G+ +++A+Q+ ++ + + YAN+I T+DGGTH G K++LTRT+N
Sbjct: 237 LPADPIYVEDHKNGVWVEVAVQYVVNSDRELIFSYANTIHTVDGGTHEAGFKSALTRTIN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K VK+ SLSGE +REGLT +I+V+VP P+FEGQTKT+LGN EVR +VD V
Sbjct: 297 DYARKYNLVKND--SLSGEDIREGLTAVINVKVPEPQFEGQTKTKLGNSEVRGLVDWVVS 354
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ L YLE HP I+ +++ A +A AA+RAR+L ++KS+L S++LPGKLADCS
Sbjct: 355 QRLAAYLEEHPTEARQIVQRAVVASRAREAARRARELTKRKSLLESATLPGKLADCSRRD 414
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P+ SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILN E+ + NEEI+ LI A+
Sbjct: 415 PQHSELYLVEGDSAGGSAKQGRDREFQAILPLRGKILNAEKARRDKLLGNEEIRALITAI 474
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G GEDF RYH+I+I+TDADVDG+HIRTLLLTFFYRY K L D G +Y+ PPL
Sbjct: 475 GTGF-GEDFDLAKARYHRIVIMTDADVDGSHIRTLLLTFFYRYMKPLIDAGYVYIAQPPL 533
Query: 607 YKVE-RG-KQVQYCYDDAELKKVKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQ 662
Y+V +G K Y Y D +L++ F N +SIQR+KGLGEM P QLW+TTL+PE
Sbjct: 534 YRVSGKGRKNGVYLYSDQQLEQF---FRENGRQNWSIQRYKGLGEMNPEQLWDTTLDPEN 590
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ +EDA A + S+LMG +V+ R+E IQ A V NLD
Sbjct: 591 RTMLQVTLEDALAAEQLLSTLMGEQVEPRREFIQQHAREVRNLD 634
>gi|164510799|emb|CAK18881.1| topoisomerase II subunit B [Staphylococcus intermedius NCTC 11048]
Length = 640
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 430/642 (66%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV
Sbjct: 7 SENYGASQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS++LEV V RDG +HQ Y +G P L V D+ GT IRF D +F
Sbjct: 125 SVVNALSDTLEVYVHRDGRIHHQAYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+++ T+ RIRELAFLN + I L E D E + + Y + GG++ YV+ +N +
Sbjct: 181 QETTVYNYETLQKRIRELAFLNKGIRITLTDE-RDEENVREDSYHYEGGIKSYVELINEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLH+ + + D I +++ALQ+ S ++ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPLHEEPIYVHQTRDDIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN+ G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNNYGAQSKLIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 VFSELFERFLFEHPQVARIIVEKGIMASRARIAAKKAREVTRRKSALDISSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P ESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ ++
Sbjct: 419 SKDPSESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDKILSNNEIRQMV 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVFNDRELDKLKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ ++DA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 AMLQVTLDDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|404329035|ref|ZP_10969483.1| DNA gyrase subunit B [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 639
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/647 (50%), Positives = 445/647 (68%), Gaps = 21/647 (3%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
++ + Y + QIQVLEGLEAVRKRP MYIG+TG +GLHHLV+E++DN++DEA AG+
Sbjct: 3 EQQEAKQAYNASQIQVLEGLEAVRKRPGMYIGTTGEKGLHHLVWEVVDNSIDEALAGFCH 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I+V + D I P+D+ + A+E ++TVLHAGGKFGG S L
Sbjct: 63 HIQVFIEKDGGITVIDDGRGIPVDIQKKVGRPAVEVIMTVLHAGGKFGGGGYKVSGG--L 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG SVVNALS ++ V V+R+G Y+Q+Y RGKPV L + DR GT F P
Sbjct: 121 HGVGASVVNALSTTMWVKVYRNGHIYYQEYHRGKPVADLKI----IGDTDRTGTTTHFIP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
D ++F F++ T+ RIRELAFLN + I++ ED EK++ + + GG+ EYV
Sbjct: 177 DPEIFKETTHFNYETLRVRIRELAFLNKNIRISI--EDRR-EKDKKESFHYEGGIREYVA 233
Query: 300 WLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+LN K+ LH + + DGI +++A+Q+ +D ++ + +AN+I T +GGTH G K
Sbjct: 234 FLNRSKEVLHQPIDLEGEQDGIKVEIAMQY-NDGFACQLYSFANNIHTHEGGTHEYGFKV 292
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N +K++ +K D +LSGE VREGLT I+SV+ P+P+FEGQTKT+LGNPEVR
Sbjct: 293 ALTRVINDYARKNQLMKSSDPNLSGEDVREGLTAIVSVKHPDPQFEGQTKTKLGNPEVRT 352
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+ D + +L +PD+ I+ K A +A AAK+AR+L R+KS L SSSLPGKL
Sbjct: 353 ITDNLFSNSFSRFLYENPDIARLIVEKGTIASRARSAAKKARELTRRKSSLESSSLPGKL 412
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC+S SE++IVEGDSAGGSAKQGRDR +QAILPLRGKILNVE+ + N EI
Sbjct: 413 ADCTSRDASISELYIVEGDSAGGSAKQGRDRMYQAILPLRGKILNVEKARLDKILSNAEI 472
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+ +I ALG GV G++F+ E RYHKIII+TDADVDGAHIRTLLLTFFYR+ + L ++G I
Sbjct: 473 RAMITALGTGV-GDEFRLEKARYHKIIIMTDADVDGAHIRTLLLTFFYRFMRPLLEKGYI 531
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLY+V+ GK ++Y YDD EL K++ PSN ++QR+KGLGEM P QLWETT++
Sbjct: 532 YIAQPPLYRVQYGKTLKYAYDDKELTKIQGELPSNVKPALQRYKGLGEMNPEQLWETTMD 591
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE R++ ++ +EDA EA+ +F LMG RV+ R++ IQ A+ V NLD
Sbjct: 592 PENRVVLKVHLEDAIEADQIFEMLMGDRVEPRRDFIQENAHYVQNLD 638
>gi|312143598|ref|YP_003995044.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311904249|gb|ADQ14690.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 636
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 317/636 (49%), Positives = 436/636 (68%), Gaps = 24/636 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVL+GLEAVRKRP MYIGSTG +GLHHLV+E++DN++DE AGY I+V +
Sbjct: 10 YNADQIQVLKGLEAVRKRPGMYIGSTGIKGLHHLVWEVVDNSIDEFLAGYGDEIKVTIHE 69
Query: 137 DN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+N IP D+H + A++ VLT LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 70 NNEITVEDYGRGIPADIHKDSGLPAVQVVLTTLHAGGKFNNNS--YKVSGGLHGVGVSVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE L +T +G +Y Q + +G P + L + R GT IRF D +F A
Sbjct: 128 NALSEKLVLTTHWEGNKYRQVFKKGVPTSKLE----KLGKTKRSGTVIRFKADSDIFA-A 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +A R++E A+LN LT+ L E + EK + +Y GG++ +V++LN D+
Sbjct: 183 RDYKFENLAHRLQESAYLNKDLTLILIDERGEGEKKKVFQY--DGGIKAFVEFLNKDRNV 240
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
++ D++ F + +++A+Q+ +D Y++ + YAN+I TIDGG H+ G K +LTR +N
Sbjct: 241 INEDIIYFESKPEDYEVEMAIQY-NDGYNERIYSYANNINTIDGGYHLTGFKTALTRAIN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ K + + K SL G+ VREG+T II+V++P P+FEGQTKT+LGN E+R +V+ V
Sbjct: 300 NFAKNNNRLPAKISSLRGKDVREGITAIINVKLPEPQFEGQTKTKLGNSELRSIVESEVY 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
EYL+ Y + +PD+ + ++ K++ A++A A+K+AR+L ++KS L S++LPGKLADCSS
Sbjct: 360 EYLSLYFDTNPDLANKVIDKAVQAVRARKASKKARELTKRKSALNSNALPGKLADCSSKK 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
E+SE+FIVEGDSAGGSAKQGRDR FQAILPL+GKILNVER + N EI ++I AL
Sbjct: 420 AEKSELFIVEGDSAGGSAKQGRDRNFQAILPLKGKILNVERARLDKILNNTEIASIITAL 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF + LRYHKIII+TDADVDGAHI TL+LT FYRY L +EG IY+ PPL
Sbjct: 480 GAGI-GEDFNIKNLRYHKIIIMTDADVDGAHIATLILTLFYRYMPELIEEGYIYLAKPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV RGK +Y Y D EL + K + +S+QR+KGLGEM P QLW+TT++PE R+L
Sbjct: 539 YKVSRGKSTKYLYSDQELAEYKKKHEN---FSLQRYKGLGEMNPRQLWDTTMDPENRVLL 595
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
++ I+D EA+ +F+ LMG+ RKE I N A LV
Sbjct: 596 RVEIDDDFEADDIFTRLMGSNASLRKEFIFNNAELV 631
>gi|304437923|ref|ZP_07397869.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369063|gb|EFM22742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 685
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 338/645 (52%), Positives = 438/645 (67%), Gaps = 26/645 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 54 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVGV 113
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 114 TIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 170
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++V V RDG + +SRG VTT H + + D GTR+ F PD ++
Sbjct: 171 VSVVNALSTEMDVEVRRDGKIFAISFSRG--VTTTKLH--EIGTSDTTGTRVHFVPDPEI 226
Query: 244 FT-TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
FT T FD T+ R+RELAFLN +TI L E +++ + F GG+ +V LN
Sbjct: 227 FTVTTYSFD--TLKHRLRELAFLNHGITITLTDERGTEVRSE--TFHFDGGIRSFVSHLN 282
Query: 303 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ +++ + F D I +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +L
Sbjct: 283 RKKETINEEPIYFNGVKDDIVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIAL 341
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR N ++ +KDKD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +V
Sbjct: 342 TRAANDFARRLNVLKDKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIV 401
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D V E LTEY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLAD
Sbjct: 402 DSIVTEGLTEYFEENPAVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLAD 461
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+
Sbjct: 462 CSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRT 521
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY K L D G +Y+
Sbjct: 522 MITAFGTGI-GEEFDLAKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYI 580
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NPE
Sbjct: 581 AQPPLYQIRKDKKHFYTYSDDEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPE 639
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 GRTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENAKLVRNLD 684
>gi|418629092|ref|ZP_13191607.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
gi|374834825|gb|EHR98460.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
Length = 643
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 435/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKRKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|289422479|ref|ZP_06424322.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429727415|ref|ZP_19262187.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
gi|289157051|gb|EFD05673.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429152573|gb|EKX95391.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
Length = 635
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 333/640 (52%), Positives = 440/640 (68%), Gaps = 22/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG S I ++L
Sbjct: 6 YGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSEIYISLND 65
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+++HP T S LETVLTVLHAGGKFGG S LHGVG+SVV
Sbjct: 66 DGSVTVRDNGRGIPVEVHPKTGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ + V RDG Y Q+Y +G VT V+ + K+ GT I F PD +F
Sbjct: 124 NALSDWVVAEVSRDGKLYRQRYEKG--VTKTKLEVVDENQKE-SGTSITFMPDASIFDEV 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F + T+ R REL+FLN + I + EK++ + + GGL EYV++LN K
Sbjct: 181 V-FSYETLEYRFRELSFLNRVIKIVFDDKRKGQEKSK--TFHYTGGLIEYVKYLNRTKNT 237
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ K D TI+LALQ+ +DAYS+ + +AN+I T +GG H+ G K +LT+ +N
Sbjct: 238 LHDQIIYVDKMQDDCTIELALQY-TDAYSENIYSFANNINTHEGGVHLSGFKTALTKAMN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++ +KDKD +L+GE +REG+T I+SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 297 DYARRNNILKDKDSNLTGEDIREGITAIVSVKLPEPQFEGQTKTKLGNTFMRGIVDSIAN 356
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + ++E +P V I+ K L + +A AAK+AR+L R+KSVL ++SLPGKLADCS +
Sbjct: 357 EEIGAFMEENPSVARVIIDKCLRSQRAREAAKKARELTRRKSVLETTSLPGKLADCSEKS 416
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEIF+VEGDSAGGSAK GRDR QAILPLRGKILNVE+ + +EEI+N+I A
Sbjct: 417 PEKSEIFLVEGDSAGGSAKGGRDRNIQAILPLRGKILNVEKSRLDKILSSEEIKNMITAF 476
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF + LRYHKIII+TDADVDGAHIRTLLLTFF+RY + L ++G +Y +PPL
Sbjct: 477 GCGI-GEDFDEAKLRYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIEQGYVYAAMPPL 535
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+K+++ K+ Y Y D EL + I R+KGLGEM QLWETT++PEQR+L+
Sbjct: 536 FKIKKAKKEYYAYTDRELGSLLDEVGRQGT-EISRYKGLGEMNANQLWETTMDPEQRILQ 594
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ IEDA A+ FS LMG +V R+E I +NA + NLD
Sbjct: 595 QVTIEDAIFADETFSMLMGDKVAPRREFIEENAKYVRNLD 634
>gi|399949942|gb|AFP65598.1| gyrB [Chroomonas mesostigmatica CCMP1168]
Length = 690
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 332/648 (51%), Positives = 448/648 (69%), Gaps = 21/648 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +I VLEGLE VR+RP ++IGSTG +GLHHL YEI+DN+VDEA AGY S+I + +
Sbjct: 48 SYNAGKITVLEGLEPVRRRPGVFIGSTGIKGLHHLAYEIIDNSVDEALAGYCSDILICIN 107
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
++ S IP D+HP T K+ALETVLT+LHAGGK GY VSGGLHGVG+SV
Sbjct: 108 SNMSLTIKDKGRGIPTDIHPVTGKTALETVLTILHAGGK--FGGGGYKVSGGLHGVGVSV 165
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE + R ++ RGK + + + +S + GT + F PD Q+F+
Sbjct: 166 VNALSEFFHINTRRIQRRCSMRFVRGKTIGEIKINQKSRNSLEINGTSVNFKPDFQIFSG 225
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +D I R+ ELAFLN L + + ED K + + + +AGG+ EY+ L+ K
Sbjct: 226 SFVYDSFIIGERLNELAFLNSDLKLII--EDRRKNKIKKSIFKYAGGISEYIIALSKKKS 283
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
P+H ++ K+ G+ + +ALQW + S+ +L + N+I+T +GGTH++ +K LTRTLN
Sbjct: 284 PIHPIINIDKEFKGMNMQIALQWTKEHSSENILSFVNNIKTNEGGTHLDSLKVVLTRTLN 343
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+KS K+ +LSG+ +REGL IISV++P PEFEGQTK++LGNPE+R V+D V
Sbjct: 344 YFGRKSGKFKENFPNLSGDFIREGLFGIISVKIPEPEFEGQTKSKLGNPEIRGVIDTVVG 403
Query: 427 EYLTEYLEL-HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
YL E+ E+ +PD SIL K+++A +AA AAK+A++L+R+KS L +LPGKLADCS
Sbjct: 404 NYLKEFFEIQNPDACFSILEKAIAAFQAAEAAKKAKELIRRKSALEFITLPGKLADCSIK 463
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P+ESEIFIVEGDSAGGSAKQ RDR FQAILPLRGKI+N+E+ DE +YKN EIQ LI A
Sbjct: 464 NPKESEIFIVEGDSAGGSAKQARDRMFQAILPLRGKIINIEKTDETKIYKNTEIQALISA 523
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LGLG +G+ FK + LRY +III+TDADVDGAHIRTLLLTFFYRYQ+ L + G +Y+ PP
Sbjct: 524 LGLGTRGDLFKIDQLRYRRIIIMTDADVDGAHIRTLLLTFFYRYQRKLIENGFVYIACPP 583
Query: 606 LYKVER-GKQVQ----YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
LYK+E GK + YCY D EL+ S ++QRFKGLGEMMP QLWETT+NP
Sbjct: 584 LYKIEDVGKNKKNFKNYCYSDGELEFFMSRMSKKI--NVQRFKGLGEMMPEQLWETTMNP 641
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 708
R+LK++ + D +A+ +F+ LMG +V RKE IQ A+ + L+++D
Sbjct: 642 STRILKKVEVIDLIKADRIFNVLMGDKVFARKEFIQIHADKMRLENID 689
>gi|420202666|ref|ZP_14708256.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
gi|394269207|gb|EJE13745.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
Length = 643
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 434/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L+ E E+ + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLH+ + + D I +++ALQ+ S Y +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHEEPIYIHQSKDDIEVEIALQYNS-GYGTNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|257875897|ref|ZP_05655550.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
gi|257810063|gb|EEV38883.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
Length = 649
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/647 (50%), Positives = 440/647 (68%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 12 AKAYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEPDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNAS 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 TAMGTGF-GADFDVAKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + +LK S P+ S+QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPSVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|169335585|ref|ZP_02862778.1| hypothetical protein ANASTE_02000 [Anaerofustis stercorihominis DSM
17244]
gi|169258323|gb|EDS72289.1| DNA gyrase, B subunit [Anaerofustis stercorihominis DSM 17244]
Length = 636
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/643 (50%), Positives = 447/643 (69%), Gaps = 23/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + +I+VLEGLEAVRKRP MYIGSTG +GLHHLVYEI+DN+VDEA AG+ NI V
Sbjct: 5 NSNYDASKIKVLEGLEAVRKRPGMYIGSTGEKGLHHLVYEIVDNSVDEALAGFCKNIVVT 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ ++I P ++ KSA+E LT+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IGEGDTITVEDDGRGIPTGMNEKYKKSAVEIALTMLHAGGKF--DSGTYKVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L V V+++G Y QKY RGKP+T L V R GT + F PD ++F
Sbjct: 123 SVVNALSEHLTVNVYQNGQVYEQKYERGKPITGLEV----VGKTKRTGTTVFFKPDGEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ + F+++T+ RIRELAFLN L I L+ D+ K+Q + + GG+ E+V + N
Sbjct: 179 SELV-FNYDTLKHRIRELAFLNKGLNITLK--DTREGKDQEESFHYEGGIIEFVDYANRG 235
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ L +V+ F K+ D +++A+Q+ S +YS+++ +AN+I T++GG H+ G K +LTR
Sbjct: 236 KEKLTPEVIYFEKESDVCMLEVAMQF-STSYSESIYSFANNINTVEGGMHVNGFKTALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
++N+ +K +KD + +LSG+ +REGL +ISV++ +PEFEGQTKT+LGNPEVR VD
Sbjct: 295 SINAYARKYNILKDNEENLSGDDIREGLCVVISVKLADPEFEGQTKTKLGNPEVRGYVDT 354
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V + ++ YLE HP V I+ K+L+A +A AA++A+DLVR+KSVL S++LPGKLADC
Sbjct: 355 TVGDNISSYLEEHPPVAKIIVEKALTAQRARKAARKAKDLVRRKSVLESTALPGKLADCR 414
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + EI+IVEGDSAGGSAK GR+ + QAILPLRGKILNVE+ + + I+++I
Sbjct: 415 EKDPSKCEIYIVEGDSAGGSAKLGRNSKTQAILPLRGKILNVEKARLDRILNTDTIRSMI 474
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ E+F E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+
Sbjct: 475 TAFGTGIS-EEFNIEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRGLIDAGYVYIAQ 533
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+E+ K+V Y Y D +L++ + + +QR+KGLGEM QLW+TT+NPE R
Sbjct: 534 PPLYKLEKQKKVWYLYSDEQLEEKLQEIGRDKI-GLQRYKGLGEMNGEQLWDTTMNPENR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ I+DAA A+ +FS LMG +V RK+ I +NA + NLD
Sbjct: 593 TLLQVSIDDAAYADEIFSILMGDQVQPRKDFITENARKVQNLD 635
>gi|407796859|ref|ZP_11143810.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
gi|407018757|gb|EKE31478.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
Length = 643
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 436/642 (67%), Gaps = 21/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+ +I+V +
Sbjct: 11 QAYDENQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMAGHCDHIQVVI 70
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + T + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 71 EEDNSITVMDNGRGIPVGIQEKTGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 128
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ LEV V RDG YHQ + G P V +D+ D+ GT+I F PD ++F
Sbjct: 129 VVNALSDYLEVHVHRDGKLYHQDFRHGVP----QKDVEEIDTTDKTGTQIHFKPDPEIFK 184
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEK-NQYNEYFFAGGLEEYVQWLNTD 304
++D T+ R+RELAFLN LTI + ED E N E+++ GG+ YV+ LN+
Sbjct: 185 EGQEYDFETLTTRLRELAFLNRGLTITV--EDKREEHGNGKKEFYYEGGIISYVEHLNSS 242
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
++ LH+ + + DGI+I+LALQ+ +D ++ + YAN+I T +GGTH G K LTR
Sbjct: 243 REVLHEPIYAEAEQDGISIELALQY-NDGFASNIYSYANNIHTYEGGTHESGFKTGLTRV 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ ++ D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E R V D
Sbjct: 302 INDYARKNSMFRENDPNLTGDDVREGLTVIISIKHPDPQFEGQTKTKLGNSEARTVTDAL 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +++L +P+V I+ K L A +A +AAK+AR+L R+KS L S+LPGKL+DC+S
Sbjct: 362 FSENFSKFLLENPNVAKIIVEKGLMASRARMAAKKARELTRRKSALEISNLPGKLSDCAS 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P ESE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 422 KDPSESELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRTMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV GE+F RYHK++I+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ P
Sbjct: 482 ALGSGV-GEEFDVSKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRPLLEDGYVYIAQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++++ K+ Y + D EL++ + P+ IQR+KGLGEM P QLWETT+NPE R
Sbjct: 541 PLYQIKQNKKEYYTFSDQELEEKLAEIPATPKPVIQRYKGLGEMNPEQLWETTMNPEGRT 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA A+ FS LMG V+ R+ IQ NA + NLD
Sbjct: 601 MLQVTLEDAIGADETFSMLMGDAVEPRRNFIQENARYVQNLD 642
>gi|262039519|ref|ZP_06012821.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
gi|261746500|gb|EEY34037.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
Length = 660
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/669 (49%), Positives = 439/669 (65%), Gaps = 46/669 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+E I+VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDEA AG NI V
Sbjct: 1 MANNYGAENIKVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSVDEALAGVCDNIIV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L DN IP H T KS LE V+TVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 KILKDNVIEVSDNGRGIPFATHE-TGKSTLEVVMTVLHAGGKF--DNDNYKVSGGLHGVG 117
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LEVTV RDG Q Y RG+PV+ + + S + GT +F D ++
Sbjct: 118 VSVVNALSEWLEVTVTRDGQIVRQTYKRGEPVSDV--EKIGEASPEAHGTTTKFKADPEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T + ++ + + R++ELA+LN LTI L E D EK + ++ F GG+ +++ +
Sbjct: 176 FETTV-YEFSVLESRLKELAYLNKGLTITLIDE-RDQEKIKEEKFLFEGGIIDFLNEI-A 232
Query: 304 DKKPLHDVVGFRKD------------VDG-------------ITIDLALQWCSDAYSDTM 338
D++ + D V + D VD + +++A+ + + + +
Sbjct: 233 DEEKITDEVIYMSDTYEVEAAKEVEIVDDNGNTVKKMRAAKFVEVEIAMSYTI-SQRENV 291
Query: 339 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVR 398
+ N+I T +GGTH+ G + +LTRT+N + K+ VKDKD + G VREGL C+ISV+
Sbjct: 292 YSFVNNINTHEGGTHVSGFRTALTRTINDIAKQMNIVKDKDGTFQGTDVREGLVCVISVK 351
Query: 399 VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAK 458
+P P+FEGQTKT+LGN EV +V V L YLE HP + I+ K + +A AAK
Sbjct: 352 IPEPQFEGQTKTKLGNSEVTGIVSNIVGNNLKFYLEDHPKEAEKIIEKMTMSKRAREAAK 411
Query: 459 RARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPL 518
+AR+LV +K+ L SLPGKLADCSS P ESEIFIVEG+SAGGSAKQGRDRRFQAILPL
Sbjct: 412 KARELVLRKNTLEVGSLPGKLADCSSKDPSESEIFIVEGNSAGGSAKQGRDRRFQAILPL 471
Query: 519 RGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHI 578
RGKILNVE+ + +N EI+ +I A G G G+D E LRYHKIII+TDADVDGAHI
Sbjct: 472 RGKILNVEKSGMHKLLENAEIRAMITAFGAGF-GDDMDLEKLRYHKIIIMTDADVDGAHI 530
Query: 579 RTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP-SNALY 637
RTL+LTFFYR + L +EG IY+ PPLYKV+ GK ++Y Y D ++KK+ S N Y
Sbjct: 531 RTLMLTFFYRQLRELINEGYIYIAQPPLYKVQAGKAIKYAYSDEQMKKITSVLERDNRRY 590
Query: 638 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN 697
+IQR+KGLGEM P QLWETTL+PE R L ++ +EDA+ A+ +F+ LMG +V+ R++ I+
Sbjct: 591 TIQRYKGLGEMNPEQLWETTLDPEVRTLLKVTMEDASYADKMFNILMGDKVEPRRQFIEE 650
Query: 698 AANLV-NLD 705
AN V NLD
Sbjct: 651 NANYVRNLD 659
>gi|406829974|gb|AFS63977.1| DNA gyrase subunit B [Cloacibacillus sp. CL-84]
Length = 647
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 315/640 (49%), Positives = 441/640 (68%), Gaps = 24/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I VLEGLEAVRKRP MYIG RGLHHLVYE++DN++DE+ AG+ I V +
Sbjct: 20 YTAKDIHVLEGLEAVRKRPGMYIGDQSQRGLHHLVYEVVDNSIDESLAGFCDTINVTINP 79
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP +LH + KSA E VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 80 DGSVTVIDNGRGIPTELHE-SGKSAAEVVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVV 136
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LE+T+WRDG E+HQ+Y RG P+T L + +GTR++F PD ++F+T
Sbjct: 137 NALSVWLELTIWRDGKEHHQRYERGIPMTQLEV----TGDTELRGTRVQFMPDDEIFSTT 192
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F + + R+RELAFLN +TI ED EK + Y + GG+ +V++LN K+
Sbjct: 193 -EFQADILKQRLRELAFLNSHITINF--EDQRSEKPEKKSYHYPGGISAFVEYLNKGKEV 249
Query: 308 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + V + D +++A+Q+ +D Y + + G+ N I TI+GGTH+ G ++++TR +N
Sbjct: 250 LFKEPVVINGEKDKTQLEVAIQY-NDTYIERLFGFVNLINTIEGGTHVAGFRSAMTRAIN 308
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K K +K+KD +LSG+ ++EGLT +ISV+V P+FEGQTKT+LGN +V+ +VD V
Sbjct: 309 DEARKLKILKEKDANLSGDDLKEGLTAVISVKVMEPQFEGQTKTKLGNNDVKGIVDSIVY 368
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L L+ P++L I+ +L A +A AAK+A++LVR+KSV+ +LPGKL+DCS+
Sbjct: 369 EGLKNALDERPEILKPIVESALRARQAREAAKKAKELVRRKSVMSGLTLPGKLSDCSNRN 428
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P + EI+IVEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ + +E I+N+I AL
Sbjct: 429 PADCEIYIVEGDSAGGSAKQGRNREFQAILPLRGKILNVEKARLEKILSSETIRNIILAL 488
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV G+DF ++ LRYHKI I+ DADVDGAHIRTLLLT F+RY + ++G +YV PPL
Sbjct: 489 GCGV-GDDFNEDKLRYHKIFIMADADVDGAHIRTLLLTLFFRYMPQIIEKGYLYVAQPPL 547
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
++V+ GK++ YC+ + E+K+ ++ + +QR+KGLGEM QLWETT+NPE R++
Sbjct: 548 FRVQCGKEITYCFSEKEMKEAQNKANGKKV-EVQRYKGLGEMNAEQLWETTMNPEHRIIN 606
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ ++DA EA+ +F LMG V+ R++ I+ V NLD
Sbjct: 607 RVEVQDAVEADELFGILMGDVVEPRRKFIEQYGKEVKNLD 646
>gi|417643976|ref|ZP_12293998.1| DNA gyrase, B subunit [Staphylococcus warneri VCU121]
gi|445058376|ref|YP_007383780.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
gi|330685298|gb|EGG96959.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU121]
gi|443424433|gb|AGC89336.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
Length = 644
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 430/642 (66%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA I V
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADEINVT 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ YHQ Y +G P L + S D+ GT IRF D +F
Sbjct: 129 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EIGSTDKTGTAIRFKADSSIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L E + + Q + Y++ GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLTDERDEDDIRQ-DSYYYEGGIKSYVEMLNEN 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H + + + D I +++A+Q+ + YS +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHGEPIYIHQSKDDIEVEIAIQY-NKGYSTNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGMNSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD QAILPLRGKILNVE+ + N EI+++I
Sbjct: 423 SKNPEESEIFLVEGDSAGGSTKSGRDSSTQAILPLRGKILNVEKARLDRILNNNEIRSMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 602 SMLQVTLEDAIDADQTFEMLMGDIVENRRQFIEDNAVYANLD 643
>gi|393809331|gb|AFN25839.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/642 (51%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRVLTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKVELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|313892202|ref|ZP_07825795.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
gi|313119340|gb|EFR42539.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
Length = 646
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/640 (51%), Positives = 441/640 (68%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV+L
Sbjct: 18 YSAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVSLND 77
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP +H T K A+E VLTVLHAGGKFGG GY++SGGLHGVG+SVV
Sbjct: 78 DGSCTVVDNGRGIPTGMHE-TGKPAMEVVLTVLHAGGKFGGE--GYAISGGLHGVGISVV 134
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +V V RDG + + RG ++ + GT + F PD +F
Sbjct: 135 NALSEWTKVNVRRDGKFHEMAFCRGDVTESMRTY----GETSETGTTVTFKPDPLIFKEG 190
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
FD++T+ R+RELAFLN L I L D+ ++ E+ +AGG+ E++++LN K
Sbjct: 191 TDFDYDTLKVRMRELAFLNKGLRITL--SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDA 248
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+HD V+ F + D I +D+A+Q+ + YS++M + N I T +GG H+ G +++LTRT+N
Sbjct: 249 VHDDVISFEGERDKIIVDIAMQYQT-GYSESMYTFVNDINTTEGGMHLSGFRSALTRTIN 307
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + +K+ + +L+G+ VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ VVD V
Sbjct: 308 DYARTNNLLKENEDNLTGDDVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVS 367
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L YLE HP I+ K ++A +A AAKRAR+L R+K+ L SSLPGKL+DCS
Sbjct: 368 EGLHIYLEEHPAEARLIVEKGITASRAREAAKRARELTRRKNALEVSSLPGKLSDCSEKD 427
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P+++EI+IVEGDSAGGSAK GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A
Sbjct: 428 PKKTEIYIVEGDSAGGSAKSGRDRRYQAILPLRGKILNVEKARVDRVLNSDTIRMMITAF 487
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV E F LRY+KIII+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PPL
Sbjct: 488 GTGVS-EGFDISKLRYYKIIIMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAKPPL 546
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V +G+Q Y YDD E K+ + +IQR+KGLGEM P QLW TT+NPEQR++
Sbjct: 547 YQVRKGRQKYYTYDDDEQNKLLDEIGRDGC-TIQRYKGLGEMDPEQLWNTTMNPEQRVMM 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ + DA EA+ +F+ LMG +V+ R++ I +NA N+ NLD
Sbjct: 606 RVELTDAVEADRLFTILMGDKVEPRRKFIEENAMNVTNLD 645
>gi|257062759|ref|YP_003142431.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
gi|256790412|gb|ACV21082.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
Length = 648
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/652 (50%), Positives = 435/652 (66%), Gaps = 25/652 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVLEGLEAVRKRP MYIGSTG RGLHHLVYE++DNAVDEA AGY + I+V
Sbjct: 6 SSHYDAGDIQVLEGLEAVRKRPGMYIGSTGTRGLHHLVYEVVDNAVDEALAGYCTKIDVI 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P++ HP +E VLT+LHAGGKFGG GY VSGGLHGVG+
Sbjct: 66 IHEDNSITVIDNGRGIPVEKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGV 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS LEV V RDG +Y +SRGK V L + + GT + FWPD ++F
Sbjct: 124 SCVNALSTRLEVEVCRDGKKYGIAFSRGKTVEKLH----QIGTSKTTGTTVTFWPDPEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLN 302
T + +D+ T+ R RE+AFLN L I L E D E N +E F + GG+ ++V++LN
Sbjct: 180 TDTLVYDYETLQERFREMAFLNKGLRIELTDERQQDEEGNFKHETFKYDGGIVDFVKYLN 239
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ L+ + F + T+++ +QW + ++ ++ +AN+I T +GGTH++G K +LT
Sbjct: 240 QGKETLNKPIYFEAENADGTVEVVMQWSTSYGTNGIMAFANNINTHEGGTHLDGFKNALT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N + +K+KD +L+G+ REGL IISV++ +P+FEGQTKT+LGN E+R +V
Sbjct: 300 RTINDYARSKGLLKEKDKNLTGDDAREGLAAIISVKLHDPQFEGQTKTKLGNVEIRGLVQ 359
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+V + L+EYLE +P I+ K+ ALKA AA++AR++ R+K VL S S+PGKLADC
Sbjct: 360 GAVTKGLSEYLEENPTPAKRIVGKASQALKAREAARKAREMTRRKGVLDSFSMPGKLADC 419
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P SE+FIVEGDSAGGSAKQ RDR++QAILPLRGKILNVER ++ I +L
Sbjct: 420 SSREPALSEMFIVEGDSAGGSAKQARDRKYQAILPLRGKILNVERAGLHRALSSDTISSL 479
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G + G+D+ + RYH+III+TDADVDGAHIR LLLTFFYRY L + G IY+
Sbjct: 480 ITAIGTNI-GDDYNGDNARYHRIIIMTDADVDGAHIRCLLLTFFYRYMPDLINRGYIYIA 538
Query: 603 VPPLYKVER-----GKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
PPLY +++ GK ++Y Y+D ++ + Y IQR+KGLGEM P QLWETT
Sbjct: 539 QPPLYGLKKKNSASGKILKYIYNDEAKDQIMAQLEDPDKYDIQRYKGLGEMDPEQLWETT 598
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+ PE R L Q+ IEDAA A S LMG V+ RKE IQ N +++ LDI
Sbjct: 599 MEPETRTLIQVSIEDAAAAERAVSDLMGDDVEPRKEFIQK--NALDVRFLDI 648
>gi|433590818|ref|YP_007280314.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|448331776|ref|ZP_21521027.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
gi|433305598|gb|AGB31410.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|445628735|gb|ELY82038.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
Length = 643
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 314/635 (49%), Positives = 436/635 (68%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++S + GT+I+FWPD +F T
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEGGEPVGDME-RVRDMESDEETGTQIQFWPDTGIFETG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V++LN +
Sbjct: 184 -EMSFSTLSNRLRELAFLNSGVRITLRDEREETDDGDVVSETYEYDGGIREFVEYLNETR 242
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+H DV+ F + I I++A+Q + ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHEDVIYFEDEEQSIQIEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L+GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYANENDLLSDLDNNLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD +SI++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAESIVNKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PEE+E+FI EGDSAGGSAKQ R+ QAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 KDPEEAELFIAEGDSAGGSAKQARNPDLQAILPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE ++ + +QRFKGLGEM P QLW+TT++P+ R+
Sbjct: 541 PLYRIRYRGETYDAMTEAERDEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 601 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKEHA 635
>gi|334127015|ref|ZP_08500951.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
gi|333390317|gb|EGK61457.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
Length = 684
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 335/644 (52%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY N+EV
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 VIHRDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSEMDVEVRRDGKIHAISFARG--VTVEKLH--EIGTSETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L D E+ + + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHFDGGIRSFVSHLNR 282
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPTVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY K L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLAKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NPE
Sbjct: 581 QPPLYQIRKDKKHFYTYSDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEG 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|314934956|ref|ZP_07842315.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
gi|313652886|gb|EFS16649.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
Length = 644
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 335/642 (52%), Positives = 434/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 12 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 71
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 72 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V+R+ YHQ Y +G P L + D+ GT IRF D ++F
Sbjct: 130 SVVNALSQDLEVYVYRNDTIYHQAYKKGVPQFDLK----EIGETDQTGTAIRFKADGEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E E+ + + Y + GG++ YV+ LN +
Sbjct: 186 TETTVYNYETLQQRIRELAFLNKGIQITLRDERE--EEGREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLH+ + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPLHEEPIYIHQTKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 ILNSYGIQSKIIKEDKDKLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
EY +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFAEYFERFLFEHPAVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 602 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|295111747|emb|CBL28497.1| DNA gyrase subunit B [Synergistetes bacterium SGP1]
Length = 644
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 333/637 (52%), Positives = 431/637 (67%), Gaps = 30/637 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + +I+VLEGLEAVRKRP MYIG TGPRGLHHLV E++DN++DEA AG+ + I+V +
Sbjct: 15 YNANKIKVLEGLEAVRKRPGMYIGDTGPRGLHHLVNEVVDNSIDEAMAGFCTRIDVTIHK 74
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP D HP+ + E VLT LHAGGKF YSVSGGLHGVG+S V
Sbjct: 75 DESVTVQDDGRGIPTDPHPSNGRPTCEVVLTRLHAGGKF--EQGAYSVSGGLHGVGVSAV 132
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE EVT+ R+GME Q++ RG PVT L+ V PVD QGTRI + PDK++F
Sbjct: 133 NALSEWFEVTIARNGMERTQRFERGVPVTDLSEGV-PVDW---QGTRIHYLPDKEIFED- 187
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ T+ R ELAFLN + I + +D ++ EY F GG+ +VQ+LN D+
Sbjct: 188 VHHSLETLKSRFMELAFLNAGVRIFV----TDERSSESREYHFEGGVSAFVQYLNRDRTT 243
Query: 308 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
L + G R D I +D+ALQ+ +D Y + +L YAN I T++GGTH+ G++ +LTR
Sbjct: 244 LFAPPVVISGERND---IKVDMALQY-NDEYQERILTYANLIHTVEGGTHLMGLRQALTR 299
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN + K + DK+ +L+G+ ++EGLTC++SV++ P+FEGQTKT+LGN +VR VD
Sbjct: 300 ALNEAARSGKLLNDKEDNLTGDDLKEGLTCVLSVKLVEPQFEGQTKTKLGNSDVRGAVDS 359
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L +E PD++ I+ K+L A +A AAK+A++LVR K + +LPGKLADCS
Sbjct: 360 VVYEGLLSVIEERPDIVRPIVDKALRARRAREAAKKAKELVR-KGAMTGMNLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S TPE SEI+IVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ E M +N EIQ +I
Sbjct: 419 SKTPENSEIYIVEGDSAGGSAKQARDRTFQAILPLRGKILNVEKAQEHKMLQNREIQTII 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G +F LRYHKIII+TDADVDGAHI TLLLTFFYR+ L EG IY+
Sbjct: 479 TALGCGI-GTEFNATRLRYHKIIIMTDADVDGAHISTLLLTFFYRHMPELLTEGYIYLAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V+RGKQV YCY + EL++ P +QR+KGLGEM P QLW TT++P R
Sbjct: 538 PPLYRVQRGKQVHYCYTEKELRQHVDGAPDPDKVGVQRYKGLGEMNPEQLWMTTMDPANR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
+LK++ ++D A+ F LMG RV+ R+E I AN
Sbjct: 598 ILKKVELDDDLLADEYFDILMGERVEPRREFITTNAN 634
>gi|224477952|ref|YP_002635558.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222422559|emb|CAL29373.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 640
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 431/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TENYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADKIEVI 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIRVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ Y+Q Y RG P L + + GT IRF D ++F
Sbjct: 125 SVVNALSEDLEVYVHRNNKIYNQAYKRGIPQYDLKV----IGETEHNGTEIRFKADPEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T + + + RIRELAFLN + I+LR E D + + + Y + GG++ YV+ LN +
Sbjct: 181 TETTTYQYEVLQKRIRELAFLNKGIQISLRDE-RDEDNIREDSYHYEGGIKSYVELLNEN 239
Query: 305 KKPLHDVVGFRKD-VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PL D + D D + +++A+Q+ S ++ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPLFDEPVYVHDRKDDVEVEIAIQYNS-GFTTNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G KS +K+ LSGE REG+T I+S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNSYGTKSGLIKEDKERLSGEDTREGMTAIVSIKHEDPQFEGQTKTKLGNSEVRQIVDR 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E + +L HP V I+ K L A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LSAEDMERFLYEHPQVARIIIEKGLMASRARIAAKKAREVTRRKSALEVSSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+++I
Sbjct: 419 SKNPEESEIFLVEGDSAGGSTKLGRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRSMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+ +GKQ Y +++ EL+K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLFKLTQGKQKYYVFNERELEKLKSELKPTPKWSISRYKGLGEMDADQLWETTMNPEHR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 SMLQVTLEDAIEADTTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|299143458|ref|ZP_07036538.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517943|gb|EFI41682.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 639
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 324/652 (49%), Positives = 455/652 (69%), Gaps = 28/652 (4%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
KEN ++ YG+E IQVL GLE VRKRP MYIGSTG +GLHHLVYE++DN++DEA AG
Sbjct: 1 MKENK-NRQYGAEDIQVLTGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNSIDEALAGIC 59
Query: 128 SNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+I V + DNS IP ++HP T KS +ETVLT+LHAGGKF ++ Y VSGG
Sbjct: 60 DHILVEIYEDNSVSVSDNGSGIPTEIHPQTGKSTVETVLTILHAGGKF--NNGAYKVSGG 117
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS--KDRQGTRIR 236
LHGVG+SVVNALS L V V R+G Y QK+SRG T L + V+ K+ GT+I
Sbjct: 118 LHGVGVSVVNALSTELIVNVKRNGNIYEQKFSRGIAKTQL----IEVEKLKKEETGTKIF 173
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F T ++F+ ++ R RE+AFLN + I D + Y + GG++
Sbjct: 174 FRPDPEIFDT-VEFEFEILSKRFREMAFLNKGIKIQF----IDHRIGKDETYHYEGGIKS 228
Query: 297 YVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V+++N K +H + + ++ + +++ALQ+ +D+Y++ +L +AN+I T +GG+H+
Sbjct: 229 FVEYINRKKTAIHKEIIYIDEIRENTAVEIALQY-TDSYTENILTFANNINTEEGGSHLS 287
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G +++LTR +N G+K +K+K+ +LSGE VREGLT +ISV++PNP+FEGQTK +LGN
Sbjct: 288 GFRSALTRCINDYGRKYNIIKEKEENLSGEDVREGLTGVISVKLPNPQFEGQTKAKLGNS 347
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
E R +VD SV E L+ +LE +P V +IL KSLSA +A AA++ARDL R+K++L S +L
Sbjct: 348 ETRGIVDSSVSENLSSFLEENPKVAKTILEKSLSARRAREAARKARDLTRKKNILESMTL 407
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADC ++ E +EIF+VEGDSAGGSAK RD FQAILPLRGKI+NVE+ +
Sbjct: 408 PGKLADCQNSDNETTEIFLVEGDSAGGSAKDARDSVFQAILPLRGKIMNVEKARLDKILN 467
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
++EI+ +I A G G+ G +F + LRY+KIII+TDADVDGAHI TLLLTFF+RY + L +
Sbjct: 468 SDEIKAMITAFGTGI-GSEFSIDNLRYNKIIIMTDADVDGAHIMTLLLTFFFRYMRPLIE 526
Query: 596 EGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
EG +YV PPL+ + +G K ++YCYDD EL++ + + + I+R+KGLGEM P LW
Sbjct: 527 EGHVYVAQPPLFGILKGTKALRYCYDDRELQRALNELGRDKKFDIKRYKGLGEMNPEDLW 586
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
ETT+NP+ R+L ++ I+DA EA+ FS LMG+ V+ R++ IQ NA + N+D
Sbjct: 587 ETTMNPDHRILLKVEIKDAIEADETFSMLMGSEVEPRRDFIQENALFVENID 638
>gi|293400051|ref|ZP_06644197.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453209|ref|ZP_09545105.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
gi|291306451|gb|EFE47694.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964048|gb|EHO81586.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
Length = 648
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/644 (49%), Positives = 442/644 (68%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V +Y ++ IQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+A++I++
Sbjct: 17 VDHSYTADDIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGFATDIDI 76
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
A+ DN I P + + S +ET+ T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 77 AIEKDNIIRVEDNGRGMPTGIVEKSGISGVETIFTILHAGGKFGGGA--YKVSGGLHGVG 134
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
SVVNALSE LEVTV+++G Y ++ G K V +L + D+ G+ +RF D
Sbjct: 135 ASVVNALSEWLEVTVYQNGNIYFMRFENGGKAVESLKI----IGKTDKHGSMVRFKADPT 190
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+FT +D T+ RIR+LAFLN + + L E + K Y + GG+ +YV++LN
Sbjct: 191 IFTETQVYDFETLNTRIRQLAFLNKSIKLILTDEREEERKEIV--YKYDGGIRQYVEYLN 248
Query: 303 TDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+K PLH+ V + + + DGI ++ALQ+ +D Y + + N+I T +GGTH +G + +L
Sbjct: 249 QNKSPLHEEVVYVEGIEDGILAEIALQY-NDGYVPNIYSFCNNINTAEGGTHEDGFRLAL 307
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N+ +++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V
Sbjct: 308 TRIVNAYARENGMIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIV 366
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ E L ++ +PD I+ K + A KA +AAK+AR+L R+KS L SSLPGKLAD
Sbjct: 367 SSILGEQLEKFFLENPDTAKIIIDKCILASKARMAAKKARELTRRKSALEISSLPGKLAD 426
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS E EI+IVEGDSAGGSAKQGR+ +FQAILPLRGKILNVE+ +++N EI++
Sbjct: 427 CSSRDASECEIYIVEGDSAGGSAKQGRNSKFQAILPLRGKILNVEKARLHRIFENNEIRS 486
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A G G+ GE+ LRYHKIII+TDADVDGAHI TL+LTFFYR+ + + + G +Y+
Sbjct: 487 MITAFGCGI-GEEMDISKLRYHKIIIMTDADVDGAHICTLMLTFFYRFLRPIIEGGYVYI 545
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
+PPL+K+++G++++Y YD++ +V + N SIQR+KGLGEM P QLWETT++P
Sbjct: 546 AMPPLFKIQKGQRIEYVYDESSRDRVIAEMGENV--SIQRYKGLGEMNPEQLWETTMDPA 603
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R LK++ I DA EA+ VF LMG V R+E IQ A LD
Sbjct: 604 FRTLKKVNINDAMEADKVFEMLMGEEVGPRREFIQENAVYAELD 647
>gi|189462935|ref|ZP_03011720.1| hypothetical protein BACCOP_03637 [Bacteroides coprocola DSM 17136]
gi|189430362|gb|EDU99346.1| DNA gyrase, B subunit [Bacteroides coprocola DSM 17136]
Length = 654
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 323/649 (49%), Positives = 430/649 (66%), Gaps = 28/649 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 13 YSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTINE 72
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 73 DNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 130
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS + V+R+G + Q+Y+ GKP+ V V + D GTR FWPD +FTT
Sbjct: 131 NALSTHMTTNVFRNGKIHQQEYACGKPLYA----VKEVGTTDITGTRQTFWPDGSIFTTT 186
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDK 305
++ +N + R+RELA+LN +TI L + E + + F G++E+V++LN+
Sbjct: 187 -EYKYNILQARMRELAYLNKGITITLTDKREKEEDGSFKQEIFHSEEGVKEFVRFLNSTN 245
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
PL DV+ + GI I+ A+ + + + + + Y N+I TI+GGTH G + +LTR
Sbjct: 246 TPLIDDVIYLNTEKQGIPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTRV 304
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L ++SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+
Sbjct: 305 LKKYAEESKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQA 364
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E LT YLE HP +I+ K + A A +AA++AR+ V++KS + LPGKLADCSS
Sbjct: 365 VGEALTYYLEEHPKEAKTIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCSS 424
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
T EE E+F+VEGDSAGGSAKQGR R+FQAILPLRGKILNVE+ ++++E+ N+I+
Sbjct: 425 RTAEECELFLVEGDSAGGSAKQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQ 484
Query: 545 ALGL--GVKG-EDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
ALG+ GV G ED KK + LRYHK+II+TDADVDG+HI TL++T FYRY + G
Sbjct: 485 ALGVRFGVDGTEDSKKANIDKLRYHKVIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGH 544
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWET 656
+Y+ PPLYK +GK +YCY D E + + I QR+KGLGEM P QLWET
Sbjct: 545 LYIANPPLYKCSKGKISEYCYTDEERQAFMQKYGDGTETGIHTQRYKGLGEMNPEQLWET 604
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T+NPE R+LKQ+ IE+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 605 TMNPETRILKQVSIENAAEADYIFSMLMGDDVAPRREFIEKHATYANID 653
>gi|448385291|ref|ZP_21563797.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
gi|445656786|gb|ELZ09618.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
Length = 643
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 313/635 (49%), Positives = 436/635 (68%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++ + GT+I+FWPD +F T
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEGGEPVGDME-RVRDMEPDEETGTQIQFWPDTGIFETG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V++LN +
Sbjct: 184 -EMSFSTLSNRLRELAFLNSGVRITLRDEREETDDGDVVTETYEYDGGIREFVEYLNETR 242
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+H DV+ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 SAMHEDVIYFEDEEQSIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L+GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYANENDLLSDLDNNLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD +SI++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAESIVNKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PEE+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 KDPEEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE ++ + +QRFKGLGEM P QLW+TT++P+ R+
Sbjct: 541 PLYRIRYRGETYDAMTEAERDEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 601 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKENA 635
>gi|384455130|ref|YP_005667723.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417968034|ref|ZP_12609081.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|418015417|ref|ZP_12654982.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418371928|ref|ZP_12964026.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|345505752|gb|EGX28046.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346983471|dbj|BAK79147.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380340308|gb|EIA28918.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|380343027|gb|EIA31447.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 639
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/645 (51%), Positives = 441/645 (68%), Gaps = 31/645 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITIND 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ HP KS LE ++TVLHAGGKF G+ GY +SGGLHGVG SVV
Sbjct: 69 DNSILIVDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNGN--GYKISGGLHGVGASVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE V V R G Y Q+Y RGKPV + V + + GT F PDK++FT
Sbjct: 127 NALSERCYVKVSRSGHVYFQEYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++D + ++ R+RELAFLN + I L +D N E+F++GG+ E+++ +N KK
Sbjct: 183 TEYDFDVLSQRLRELAFLNAGIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKA 238
Query: 308 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L DV+ F + + + +A+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFEDVIFFEHSKNDLNLQIAIQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVN 297
Query: 367 SLGKKSKTVK----DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
KK +K D+ SL GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKESNKDEIKSLIGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+E+L +P++ I K++ A KA AAK+AR+ R KSVL ++LPGKLADC
Sbjct: 358 NIFFNCFSEFLNENPNIGKIICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE EI+IVEGDSAGGSAKQGRDR+FQAILPL GKI+NVE++ + +E I+ +
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAILPLSGKIMNVEKQRIFKILSSETIRCM 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G+DF + +RY++II++TDADVDG+HIRTLLLTF YRY + ++G +Y+
Sbjct: 477 ITAFGCGI-GQDFDVDKIRYNRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYKV GK+ YCY + EL K+K +N + IQR+KGLGEM PVQLWETT+NPE
Sbjct: 536 RPPLYKVSEGKKEFYCYTEEELNLKLKEINKNNLV--IQRYKGLGEMNPVQLWETTMNPE 593
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L ++ IE A+ A+ +FS LMG +V+ R+E IQ NA N+ NLD
Sbjct: 594 SRTLLRVTIEHASYADEIFSILMGDKVEPRREFIQNNAKNVKNLD 638
>gi|393408286|emb|CCI10030.1| topoisomerase II subunit B [Staphylococcus hominis]
gi|393809319|gb|AFN25833.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809321|gb|AFN25834.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809329|gb|AFN25838.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ +HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KESIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|325567637|ref|ZP_08144304.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|420261794|ref|ZP_14764438.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
gi|325159070|gb|EGC71216.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|394771728|gb|EJF51489.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
Length = 649
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/647 (50%), Positives = 441/647 (68%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 12 AKAYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEPDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV+ LN
Sbjct: 186 TETTEFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNAS 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 TAMGTGF-GADFDVAKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + +LK S P+ ++QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPTVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P+ RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PDNRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|257866280|ref|ZP_05645933.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257873204|ref|ZP_05652857.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
gi|257800238|gb|EEV29266.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257807368|gb|EEV36190.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
Length = 649
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/647 (50%), Positives = 440/647 (68%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 12 AKAYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEPDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNAS 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 TAMGTGF-GADFDVAKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + +LK S P+ ++QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPTVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|346226422|ref|ZP_08847564.1| DNA gyrase subunit B [Anaerophaga thermohalophila DSM 12881]
Length = 656
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 321/652 (49%), Positives = 440/652 (67%), Gaps = 26/652 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY ++I
Sbjct: 12 PVENGYKASSIQVLEGLEAVRKRPAMYIGDLGQKGLHHLVYEVVDNSIDEALAGYCTSIV 71
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + D SI P+D H +SALE V+TVLHAGGKF S Y VSGGLHGV
Sbjct: 72 VTINEDGSITVVDNGRGIPVDFHEKEGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGV 129
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS +L+ V RDG Y Q+Y +GKP+ + V + D+ GT I F PD
Sbjct: 130 GVSCVNALSSNLKAEVHRDGKIYRQEYQKGKPLAPIE----EVGTTDKTGTWITFMPDSS 185
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQW 300
+F I+F ++ +A R+RELAFLN L I L K + D E N +E F++ GL E+V +
Sbjct: 186 IFNN-IEFKYSILASRMRELAFLNSGLEIILTDKREKDEEGNFKSERFYSENGLIEFVNF 244
Query: 301 LNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
++ +++ L D + + + I +D+A+ + + ++++ + Y N+I TI+GGTH+ G +
Sbjct: 245 IDGNREKLIDEPIHISTEKNDIPVDIAIVYNT-SFNENVYSYVNNINTIEGGTHLTGFRR 303
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTL + +KS + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 304 GLTRTLKNWAEKSGMLSKLKFDINGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSL 363
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V L+ YLE +P +I +K + A A AA++AR+LV++KSVL LPGKL
Sbjct: 364 AVDQAVSTMLSNYLEENPKEAKAIANKVILAATARHAARKARELVQRKSVLSGGGLPGKL 423
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS PE++EIF+VEGDSAGG+AKQGRDRRFQAILPLRGKILNVE+ + +++N+EI
Sbjct: 424 ADCSERDPEQAEIFLVEGDSAGGTAKQGRDRRFQAILPLRGKILNVEKALQHKVFENDEI 483
Query: 540 QNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + E+ K E LRYHKI+I+TDADVDG+HI TL++TFF+RY K L
Sbjct: 484 KNIFTALGVNIGTEEDSKALNIEKLRYHKIVIMTDADVDGSHIATLIMTFFFRYMKELIK 543
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS--IQRFKGLGEMMPVQL 653
+G +Y+ PPLY +++GK +YC+ DA+ ++ + S IQR+KGLGEM QL
Sbjct: 544 KGYLYIATPPLYFLKKGKFEEYCWTDAQRREFVEKYADGKEDSVHIQRYKGLGEMNSEQL 603
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
W TT+NPE RML+Q+ E+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 604 WHTTMNPENRMLRQVTYENAAEADRIFSMLMGDDVPPRREFIEKNATYANID 655
>gi|223043343|ref|ZP_03613389.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|417906712|ref|ZP_12550492.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
gi|222443132|gb|EEE49231.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|341597523|gb|EGS40077.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
Length = 639
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 335/642 (52%), Positives = 434/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V+R+ YHQ Y +G P L + D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVYRNDTIYHQAYKKGVPQFDLK----EIGETDQTGTAIRFKADGEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E E+ + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDERE--EEGREDSYHYEGGIKSYVELLNEN 238
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLH+ + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 239 KEPLHEEPIYIHQTKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 298 ILNSYGIQSKIIKEDKDKLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
EY +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 358 LFAEYFERFLFEHPAVGRIIVEKGVMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 418 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 478 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ +SI R+KGLGEM QLWETT+NPE R
Sbjct: 537 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 597 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 638
>gi|393809335|gb|AFN25841.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V + YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHLNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|393809325|gb|AFN25836.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V + YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQELEVYVHLNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|433461798|ref|ZP_20419400.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
gi|432189693|gb|ELK46776.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
Length = 640
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/643 (51%), Positives = 430/643 (66%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +IEVA+
Sbjct: 10 QAYDESQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMAGYCDHIEVAI 69
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + T + A+ET+LTVLHAGGKFGG S LHGVG S
Sbjct: 70 EEDNSITVTDNGRGIPVGIQEKTGRPAVETILTVLHAGGKFGGGGYKVSGG--LHGVGAS 127
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V RDG Y+Q Y RG P L + D GTRI F PD+++F+
Sbjct: 128 VVNALSTKLEVFVHRDGNIYYQAYHRGVPADDLKV----IGETDITGTRITFKPDEEIFS 183
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
++ +A R+RELAFLN LTI + ++ D DP +Y F GG+ YV+ +N
Sbjct: 184 ETQEYKFEILANRLRELAFLNKGLTITIDDKRTDEDPV-----QYHFEGGILSYVEHMNR 238
Query: 304 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ LHD + D I+I++A+Q+ +D ++ + YAN+I T +GGTH G K LTR
Sbjct: 239 TREVLHDAFFIEGEQDEISIEIAMQY-NDGFASNIYSYANNIHTYEGGTHESGFKTGLTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K+ K+ D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E R V D
Sbjct: 298 VINDYARKNNMFKETDPNLTGDDVREGLTAIISLKHPDPQFEGQTKTKLGNSEARTVTDA 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E + +L +P + +I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 358 LFSENFSRFLFENPQMAKTIVEKGLMASRARMAAKKARELTRRKSALEVSNLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S + SE++IVEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N EI+ +I
Sbjct: 418 SKDAKISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEIRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ GEDF E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L ++G IY+
Sbjct: 478 TALGTGI-GEDFDIEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRPLIEKGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+++GK Y Y D L + + ++ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLYKIQQGKATYYTYSDKGLDSMLAQLSASPKPGIQRYKGLGEMNPEQLWETTMDPETR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA A+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SMLQVNLEDAMGADETFDILMGDKVEPRRNFIQENAQYVQNLD 639
>gi|376259386|ref|YP_005146106.1| DNA gyrase subunit B [Clostridium sp. BNL1100]
gi|373943380|gb|AEY64301.1| DNA gyrase, B subunit [Clostridium sp. BNL1100]
Length = 642
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/651 (51%), Positives = 444/651 (68%), Gaps = 30/651 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 7 ASSYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVANSVDEALAGRCDTIQVI 66
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP LE V T+LHAGGKFG S YSVSGGLHGVG
Sbjct: 67 VHKDNSITVTDNGSGIPVGIHPKMGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGA 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSES+EV V R+G Y QKYSRGKPVT++ V + GT F PD ++F
Sbjct: 125 SVVNALSESMEVEVKREGHIYKQKYSRGKPVTSVEI----VGETEESGTITTFKPDPEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP--EKNQYNEYFFAGGLEEYVQWLN 302
I FD + + R RE+AFLN + I L E D EKN + + GG+ +V++LN
Sbjct: 181 ED-IVFDFDAMITRYREMAFLNRGIKIKLIDERPDEIIEKNLH----YEGGIISFVEYLN 235
Query: 303 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+PLHD V+ F D +++A+Q+ +D Y++T+ YAN+I T +GGTH+ G + ++
Sbjct: 236 KTKEPLHDKVIYFEGTRDANIVEVAMQY-NDNYNETVFSYANNIATTEGGTHLTGFRTAI 294
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ LN +K +K+ D +LSGE VREGLT +ISV++P P+FEGQTKT+LGN E+R +V
Sbjct: 295 TKVLNDYARKFNIIKENDKNLSGEDVREGLTAVISVKLPEPQFEGQTKTKLGNSEIRTLV 354
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V + L +LE +P + IL KSL+A +A AA++AR+L R+KS + SS+LPGKLAD
Sbjct: 355 ENVVSDKLNIFLEENPSIAKIILDKSLTAARAREAARKARELTRRKSAMDSSTLPGKLAD 414
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS P ++EIFIVEGDSAGGSAKQGRDRR QAILPL GK+LNVE+ ++ NE++
Sbjct: 415 CSEKDPTKTEIFIVEGDSAGGSAKQGRDRRIQAILPLWGKMLNVEKSRLDKVFDNEKLAP 474
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG G+ G+DF LRY KIII+ DADVDG+HIR LLLTFF+RY + L ++G +Y+
Sbjct: 475 VIIALGAGI-GDDFDTSKLRYDKIIIMADADVDGSHIRMLLLTFFFRYMRPLVEQGHVYI 533
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKV---KSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+PPL+KV +GK+ Y YDD ++ K+ + + +IQRFKGLGEM P QLWETT+
Sbjct: 534 AMPPLFKVYKGKEEFYAYDDRQVTKIYEERGWRKDDPNVNIQRFKGLGEMNPDQLWETTM 593
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+PE R + ++ ++DA A+ VFS MG +V+ RKE I A ++ +LDI
Sbjct: 594 DPETRTIIKVDVQDAITADEVFSMFMGEKVEPRKEYIHMHAK--DVTYLDI 642
>gi|414160151|ref|ZP_11416422.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878801|gb|EKS26671.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
Length = 639
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 431/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TEDYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADTIEVI 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIRVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE+LEV V R+ Y+Q Y RG P L V + GT IRF D ++F
Sbjct: 125 SVVNALSETLEVFVHRNNKIYNQAYKRGVPQYDLKV----VGETEHTGTEIRFKADPEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T + + + RIRELAFLN + + LR D E+ + + Y + GG++ YV+ +N +
Sbjct: 181 TETTTYQYELLQKRIRELAFLNKGIQLTLR--DERGEEVKEDSYHYEGGIKSYVELINEN 238
Query: 305 KKPLHDVVGFRKD-VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PL D + D D + +++ALQ+ S +S +L YAN+I T +GGTH +G K +LTR
Sbjct: 239 KEPLFDEPVYLHDRKDDVEVEIALQYNS-GFSTNLLSYANNIHTYEGGTHEDGFKRALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G + +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 298 VLNSYGIQQGIMKDDKERLSGEDTREGLTAVVSIKHSNPQFEGQTKTKLGNSEVRQIVDR 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E + +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 358 LFTEDMERFLLEHPQVARIIVEKGMMASRARIAAKKAREVTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIFIVEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+++I
Sbjct: 418 SKNPEESEIFIVEGDSAGGSTKLGRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRSMI 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE+F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 478 TAFGTGI-GEEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+ +GKQ Y +++ EL+K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 537 PPLFKLTQGKQKYYVFNERELEKLKSELKPTPKWSIARYKGLGEMDADQLWETTMNPEHR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA EA++ F LMG V+ R++ I+ A NLD
Sbjct: 597 SMLQVTLEDAIEADLTFEMLMGDVVENRRQFIEENAVYANLD 638
>gi|212637854|ref|YP_002314374.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
gi|212559334|gb|ACJ32389.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
Length = 640
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/640 (52%), Positives = 441/640 (68%), Gaps = 22/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AG+ + I V +
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGFCTEINVIVEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG ++QKY RG P + L V DR GT I F PD ++FT
Sbjct: 129 NALSEELEVYVHRDGNIHYQKYKRGVPCSDLQV----VGETDRTGTTIHFKPDPEIFTET 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++D++T+A R+RELAFLN + I L ED E N+ NEY++ GG+ YV+ LN K+
Sbjct: 185 TEYDYDTLAHRLRELAFLNKGIRITL--EDRRGE-NRRNEYYYEGGISSYVKHLNRTKET 241
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + + DGI +++ALQ+ +D Y+ + +AN+I T +GGTH G K +LTR +N
Sbjct: 242 LHEEPIYIEGEKDGIQVEIALQY-NDGYTSNIYSFANNIHTHEGGTHELGFKTALTRIIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+K+ KD+D +L+GE VREGLT IISV+ P P+FEGQTKT+LGN + R +
Sbjct: 301 DYGRKNNMFKDQDANLTGEDVREGLTAIISVKHPAPQFEGQTKTKLGNSDARTATESIFA 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E ++L +P V I+ K + A +A LAAKRAR+L R+K+ L SSLPGKLADCSS
Sbjct: 361 EQFEKFLLENPSVAKKIVEKGILASRARLAAKRARELTRRKNALEVSSLPGKLADCSSRD 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P E+++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N E++ +I AL
Sbjct: 421 PAICELYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKSRLDKILSNNEVRAIITAL 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPL
Sbjct: 481 GTGI-GEDFDITKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMREVIEQGYVYIAQPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+++GK+++Y Y D +L+++ + P IQR+KGLGEM P QLWETT+NPE R L
Sbjct: 540 YKIQQGKRIEYAYSDRQLEEILTRLPEQPKPVIQRYKGLGEMNPEQLWETTMNPETRTLL 599
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ ++DA EA+ F LMG +V+ R++ I +NA + NLD
Sbjct: 600 KVSLQDAMEADETFEILMGDKVEPRRQFIEENAKYVKNLD 639
>gi|404418103|ref|ZP_10999881.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
gi|403489506|gb|EJY95073.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
Length = 645
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/644 (50%), Positives = 431/644 (66%), Gaps = 18/644 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+EQIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA I+V
Sbjct: 7 TENYGAEQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYADEIQVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V+ D +HQ Y RG P V+ D GT IRF D +F
Sbjct: 125 SVVNALSEDLEVYVYLDNKIHHQAYKRGIP--QFDLKVIGETDGDTTGTAIRFKADPTIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLN 302
T +++ T+ RIRELAFLN ++I LR E E Y E YF+ GG++ YV+ LN
Sbjct: 183 TETTAYNYETLEQRIRELAFLNKGISITLRDERETLEDGSYREDSYFYEGGIKSYVEMLN 242
Query: 303 TDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+K+PLH+ + + D I +++ALQ+ S ++ +L YAN+I T +GGTH +G K +L
Sbjct: 243 ENKEPLHEEPIYVHESKDEIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRAL 301
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+R LNS G KSK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VV
Sbjct: 302 SRVLNSYGIKSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVV 361
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D+ E +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLAD
Sbjct: 362 DKLFAELFERFLYENPNVARVIVEKGIMASRARIAAKKAREVTRRKSALEVSSLPGKLAD 421
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS PE+SEIFIVEGDSAGGS K GRD QAILPLRGKILNVE+ + N EI++
Sbjct: 422 CSSKDPEKSEIFIVEGDSAGGSTKSGRDSETQAILPLRGKILNVEKARLDRILNNNEIRS 481
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
++ A G G+ GE F RYHKII++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 MVTAFGTGIGGE-FDLSKARYHKIIVMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYI 540
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPL+K+ +GKQ Y +++ EL K+K+ +SI R+KGLGEM QLWETT+NPE
Sbjct: 541 AQPPLFKLTQGKQKYYVFNERELDKLKAELEPTPKWSIARYKGLGEMNADQLWETTMNPE 600
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R + Q+ +EDA A+ F LMG V+ R++ I++ A LD
Sbjct: 601 NRSMLQVTLEDAISADQTFEMLMGDVVENRRQFIEDNAVYATLD 644
>gi|386712349|ref|YP_006178671.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
gi|384071904|emb|CCG43394.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
Length = 639
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/649 (50%), Positives = 437/649 (67%), Gaps = 22/649 (3%)
Query: 68 FKENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
KE+ + K +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+
Sbjct: 1 MKEDIIEKESYDESQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMAGH 60
Query: 127 ASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
I+V + DNSI P+ + T + A+E ++TVLHAGGKFGG S
Sbjct: 61 CDQIQVMIEKDNSISVTDNGRGIPVGIQEKTGRPAVEVIMTVLHAGGKFGGGGYKVSGG- 119
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
LHGVG SVVNALS LEV V RDG ++Q + RG P L + + GTRI+F
Sbjct: 120 -LHGVGASVVNALSSKLEVFVHRDGKIHYQAFHRGVPEEDLKV----IGDTEITGTRIQF 174
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
PD+Q+FT ++++ T+A R RELAFLN LTI++ + +D E Y ++ GG+ Y
Sbjct: 175 KPDEQIFTETVEYNFETLATRTRELAFLNRGLTISIEDKRTDEEPVSY---YYEGGIRSY 231
Query: 298 VQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
V+ LN ++ LH+ + D I+I++ALQ+ +D ++ + YAN+I T +GGTH G
Sbjct: 232 VEHLNRTREVLHEPFFIESEQDDISIEIALQY-NDGFASNLYSYANNIHTYEGGTHESGF 290
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K LTR +N +K+ KD D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E
Sbjct: 291 KTGLTRVINDYARKNNMFKDMDPNLTGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEA 350
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R V D E +++L +P++ ++ K L A +A +AAK+AR+L R+K+ L S+LPG
Sbjct: 351 RTVTDALFSEGFSKFLFENPNMARIVVEKGLMASRARMAAKKARELTRRKNALEVSNLPG 410
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS P SEI++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N
Sbjct: 411 KLADCSSKDPSISEIYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNN 470
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
E++ +I ALG G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L + G
Sbjct: 471 EVRAIITALGTGI-GEDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRPLIEHG 529
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPLYK+++GK V Y Y D +L + + P++ +QR+KGLGEM P QLWETT
Sbjct: 530 YIYIAQPPLYKIQQGKAVYYTYSDKQLDTMLAELPNSPKPGVQRYKGLGEMNPEQLWETT 589
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++PE R L Q+ +EDA A+ F LMG +V+ R+ I +NA + NLD
Sbjct: 590 MDPETRTLLQVSLEDAIGADETFDILMGDKVEPRRNFIEENAQYVQNLD 638
>gi|329121792|ref|ZP_08250408.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
gi|327468065|gb|EGF13553.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
Length = 646
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 441/640 (68%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV+L
Sbjct: 18 YSAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVSLND 77
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP +H T + A+E VLTVLHAGGKFGG GY++SGGLHGVG+SVV
Sbjct: 78 DGSCTVVDNGRGIPTGMHE-TGRPAMEVVLTVLHAGGKFGGE--GYAISGGLHGVGISVV 134
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +V V RDG + + RG ++ + GT + F PD +F
Sbjct: 135 NALSEWTKVNVRRDGKFHEMAFCRGDVSESMRTY----GETSETGTTVTFKPDPLIFKEG 190
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
FD++T+ R+RELAFLN L I L D+ ++ E+ +AGG+ E++++LN K
Sbjct: 191 TDFDYDTLKVRMRELAFLNKGLRITL--SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDA 248
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+HD V+ F + D I +D+A+Q+ + YS++M + N I T +GG H+ G +++LTRT+N
Sbjct: 249 VHDDVISFEGERDKIIVDIAMQYQT-GYSESMYTFVNDINTTEGGMHLSGFRSALTRTIN 307
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + +K+ + +L+G+ VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ VVD V
Sbjct: 308 DYARTNNLLKENEDNLTGDDVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVS 367
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L YLE HP I+ K ++A +A AAKRAR+L R+K+ L SSLPGKL+DCS
Sbjct: 368 EGLHIYLEEHPSEARLIVEKGITASRAREAAKRARELTRRKNALEVSSLPGKLSDCSEKD 427
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P+++EI+IVEGDSAGGSAK GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A
Sbjct: 428 PKKTEIYIVEGDSAGGSAKSGRDRRYQAILPLRGKILNVEKARVDRVLNSDTIRMMITAF 487
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV E F LRY+KIII+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PPL
Sbjct: 488 GTGVS-EGFDISKLRYYKIIIMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAKPPL 546
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V +G+Q Y YDD E K+ + +IQR+KGLGEM P QLW TT+NPEQR++
Sbjct: 547 YQVRKGRQKYYTYDDDEQNKLLDEIGRDGC-TIQRYKGLGEMDPEQLWNTTMNPEQRVMM 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ + DA EA+ +F+ LMG +V+ R++ I +NA N+ NLD
Sbjct: 606 RVELTDAVEADRLFTILMGDKVEPRRKFIEENAMNVTNLD 645
>gi|239624129|ref|ZP_04667160.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520515|gb|EEQ60381.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 637
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/646 (50%), Positives = 440/646 (68%), Gaps = 23/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +IEV
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIEV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+ + A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVVDDGRGIPVGIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV V++DG Y Q+Y RGK T ++ S D+ GT++ F PDK++
Sbjct: 119 ASVVNALSEWLEVQVYKDGDIYQQRYERGK--VTYPLKIVGKCSPDQHGTKVTFLPDKEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I +D++T+ R+RE AFL L I L K+D D +K + + + GG++E+V +LN
Sbjct: 177 FEETI-YDYDTLKIRLRETAFLTKNLRITL-KDDRDEKKEK--TFHYEGGIKEFVTYLNK 232
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K PL+D V+ +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPLYDQVIYCEGSKEGVYVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T N +K+K +KD + SLSGE +REGLT IIS++V P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYARKNKLLKDNEDSLSGEDIREGLTAIISIKVEEPQFEGQTKQKLGNSEARSAVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LT +LE +P + ++ KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPAIAKAMCEKSIMAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE EI+IVEGDSAGGSAK R R QAILPLRGKILNVE+ +Y N EI+ +
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ EDF LRYHKIII+TDADVDGAHI TLLLTF YR+ L +G +Y+
Sbjct: 472 ITAFGTGIH-EDFDISKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPELIKQGYVYLA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVE+ K+V Y Y D EL + + + IQR+KGLGEM QLWETT++PE+
Sbjct: 531 QPPLYKVEKSKKVWYAYSDDELNSILTDIGRDTNNKIQRYKGLGEMDAEQLWETTMDPER 590
Query: 663 RMLKQLVI--EDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R+L ++ + E +E ++ F++LMG +V+ R+E I+ NA + NLD
Sbjct: 591 RVLLRVTLDEETTSEIDLTFTTLMGDQVEPRREFIEANAKRVQNLD 636
>gi|336112685|ref|YP_004567452.1| DNA gyrase subunit B [Bacillus coagulans 2-6]
gi|335366115|gb|AEH52066.1| DNA gyrase, B subunit [Bacillus coagulans 2-6]
Length = 641
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/643 (51%), Positives = 441/643 (68%), Gaps = 23/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I V +
Sbjct: 9 QSYGAEQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEALAGFCDEINVFI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 69 EKDNSITVKDNGRGIPVGIQEKVGRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L+V V RDG YHQKY RGKP L + DR GT F PD ++FT
Sbjct: 127 VVNALSTELDVYVHRDGHIYHQKYRRGKPAFDLKI----IGETDRTGTTTHFKPDPEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I+FD++ + R+RELAFLN + I + K + +P K Y+ + GG++ YV+ LN
Sbjct: 183 ETIEFDYDILTTRLRELAFLNKGIKITIEDKREKNPRKQVYH---YEGGIKSYVEHLNRS 239
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ LH + + + DGIT++++LQ+ +D ++ + +AN+I T +GGTH G K +LTR
Sbjct: 240 KEVLHKEPIYVEGEKDGITVEVSLQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K+ +K+ + +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN E R + D
Sbjct: 299 VINDYARKNNLIKENEANLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNTEARTITDA 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +++ +P V I+ K L A +A +AAK+AR+L R+KS L S+SLPGKLADC+
Sbjct: 359 VFSETFEKFMMENPQVARKIVEKGLMAARARMAAKKARELTRRKSALESTSLPGKLADCT 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P ESE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SRDPSESELYIVEGDSAGGSAKQGRDRMFQAILPLRGKILNVEKARLDKILSNAEIRTII 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG GV GEDF RYHK++I+TDADVDGAHIRTLLLTFFYRY + L D G IY+
Sbjct: 479 TALGTGV-GEDFDISKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRPLIDAGYIYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKV++GK+V+Y Y D L+++ ++ P+ +IQR+KGLGEM P QLWETT+ P R
Sbjct: 538 PPLYKVQQGKKVEYVYSDRGLEELLNTLPAQPKPAIQRYKGLGEMNPEQLWETTMEPANR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ Q+ ++DA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 598 TMLQVSLDDAIEADGTFEMLMGDKVEPRRNFIEENAIYVKNLD 640
>gi|342731691|ref|YP_004770530.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|342329146|dbj|BAK55788.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
Length = 639
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/645 (51%), Positives = 441/645 (68%), Gaps = 31/645 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITIND 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ HP KS LE ++TVLHAGGKF G+ GY +SGGLHGVG SVV
Sbjct: 69 DNSILIVDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNGN--GYKISGGLHGVGASVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE V V R G Y Q+Y RGKPV + V + + GT F PDK++FT
Sbjct: 127 NALSERCYVKVSRGGHVYFQEYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++D + ++ R+RELAFLN + I L +D N E+F++GG+ E+++ +N KK
Sbjct: 183 TEYDFDVLSQRLRELAFLNAGIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKA 238
Query: 308 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L DV+ F + + + +A+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFEDVIFFEHSKNDLNLQIAIQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVN 297
Query: 367 SLGKKSKTVK----DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
KK +K D+ SL GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKESNKDEIKSLIGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+E+L +P++ I K++ A KA AAK+AR+ R KSVL ++LPGKLADC
Sbjct: 358 NIFFNCFSEFLNENPNIGKIICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE EI+IVEGDSAGGSAKQGRDR+FQAILPL GKI+NVE++ + +E I+ +
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAILPLSGKIMNVEKQRIFKILSSETIRCM 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G+DF + +RY++II++TDADVDG+HIRTLLLTF YRY + ++G +Y+
Sbjct: 477 ITAFGCGI-GQDFDVDKIRYNRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYKV GK+ YCY + EL K+K +N + IQR+KGLGEM PVQLWETT+NPE
Sbjct: 536 RPPLYKVSEGKKEFYCYTEEELNLKLKEINKNNLV--IQRYKGLGEMNPVQLWETTMNPE 593
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L ++ IE A+ A+ +FS LMG +V+ R+E IQ NA N+ NLD
Sbjct: 594 SRTLLRVTIEHASYADEIFSILMGDKVEPRREFIQNNAKNVKNLD 638
>gi|373859274|ref|ZP_09602004.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
gi|372450943|gb|EHP24424.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
Length = 642
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 337/651 (51%), Positives = 445/651 (68%), Gaps = 23/651 (3%)
Query: 67 AFKENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
A ++N + + TY IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG
Sbjct: 2 AMEQNAMQEETYDESDIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEALAG 61
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ S+I V + DNSI P+ + + A+E + TVLHAGGKFGG S
Sbjct: 62 HCSDINVIIEKDNSITVKDNGRGIPVGIQEKVGRPAVEVIFTVLHAGGKFGGGGYKVSGG 121
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
LHGVG SVVNALS LEV V RDG Y+Q + RG P L V D GT I
Sbjct: 122 --LHGVGASVVNALSTKLEVYVHRDGKIYYQVFERGVPQADLAV----VGETDHTGTTIH 175
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD +FT +++D++T+A R+RELAFLN + I + ED E N+ NEY + GG++
Sbjct: 176 FIPDATIFTETLEYDYDTLATRLRELAFLNKNIKITI--EDKRVE-NKKNEYIYEGGIKS 232
Query: 297 YVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
YV+ LN K +H+ F + DGITID+ALQ+ +++Y+ + +AN+I T +GGTH
Sbjct: 233 YVEHLNRTKDVVHEEPIFIEGEKDGITIDVALQY-NESYTSNIYSFANNIHTYEGGTHEF 291
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K +LTR +N +K+ +K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN
Sbjct: 292 GFKTALTRVINDYARKNGLIKENDTNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNS 351
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR + D E+ ++L P V ++ K L A +A LAAK+AR+L R+KS L SSL
Sbjct: 352 EVRTITDTIFSEHFEKFLLEDPGVARKVVEKGLMAARARLAAKKARELTRRKSALEVSSL 411
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ +
Sbjct: 412 PGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILS 471
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N E++ +I A+G G+ GEDF RYHK++I+TDADVDGAHIRTLLLTFFYRY + + +
Sbjct: 472 NNEVRAMITAIGTGI-GEDFDIARARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQILE 530
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G +Y+ PPLYKV++GK+++Y Y+D EL++V + P++ +IQR+KGLGEM P QLWE
Sbjct: 531 AGYVYIAQPPLYKVQQGKRIEYAYNDKELERVFAELPNSPKPNIQRYKGLGEMNPTQLWE 590
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
TT++P R + Q+ +EDA EA+ F LMG +V+ R+ I+ NA + NLD
Sbjct: 591 TTMDPSTRTMLQVSLEDAIEADETFEMLMGDKVEPRRNFIEANAQYVKNLD 641
>gi|239637290|ref|ZP_04678277.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
gi|239597127|gb|EEQ79637.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
Length = 640
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 429/642 (66%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA I V
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADEINVT 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V R+ YHQ Y +G P L + S D+ GT IRF D +F
Sbjct: 125 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EIGSTDKTGTAIRFKADSSIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L E + + Q + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLTDERDEDDIRQ-DSYHYEGGIKSYVEMLNEN 239
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H + + + D I +++A+Q+ + YS +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHGEPIYIHQSKDDIEVEIAIQY-NKGYSTNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGMNSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEESEIF+VEGDSAGGS K GRD QAILPLRGKILNVE+ + N EI+++I
Sbjct: 419 SKNPEESEIFLVEGDSAGGSTKSGRDSSTQAILPLRGKILNVEKARLDRILNNNEIRSMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 598 SMLQVTLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|431792075|ref|YP_007218980.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782301|gb|AGA67584.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 644
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 325/649 (50%), Positives = 444/649 (68%), Gaps = 23/649 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
K N + Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY
Sbjct: 7 LKVNMPNDDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYC 66
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
I+V + +DNSI P+D+HP K A+E LTVLHAGGKF GS+ Y VSGG
Sbjct: 67 DTIDVTIHSDNSISVVDNGRGIPVDIHPKIGKPAVEVALTVLHAGGKFSGSA--YKVSGG 124
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+SVVNALS L V V +DG YHQ++ RGK + LT + DS + GT+I F
Sbjct: 125 LHGVGMSVVNALSTWLHVEVKKDGKVYHQEFMRGKTTSELTI-IGEADS-GKTGTKISFA 182
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
PD ++F I F + +A R+REL+FLN K+ I L E D ++ Y+ GG+ ++V
Sbjct: 183 PDPEIFE-EIVFQFDILAHRLRELSFLNKKVAITLIDEREDKKE----LYYHTGGIFDFV 237
Query: 299 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
+++N K+ LH + + F + DG+ +++ +Q+ +D Y + + YAN+I T +GGTH G
Sbjct: 238 KYINRSKEVLHPEPIYFEAEKDGVQVEICMQY-NDGYIENLFSYANNIHTQEGGTHESGF 296
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
KA+LTR +N +K+K +K+ D +L+GE +REGLT +ISV+VP P+FEGQTKT+LGN E+
Sbjct: 297 KAALTRVVNDYSRKNKILKENDANLTGEDIREGLTVVISVKVPEPQFEGQTKTKLGNSEI 356
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +VD E L+ +L +P ++ KSL A +A AA++AR+L R+KS L S+LPG
Sbjct: 357 RSIVDSITGEGLSVFLAENPATGKKVIEKSLQASRAREAARKARELTRRKSALEVSALPG 416
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCS E E++IVEGDSAGGSAK GRDRRFQAILP+RGKILNVE+ + N
Sbjct: 417 KLADCSWKEAELCEMYIVEGDSAGGSAKSGRDRRFQAILPIRGKILNVEKARLDRILGNA 476
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+ ++ A+G G+ EDF RYHK++I+TDADVDGAHIR LLLTFF+R+ K L +
Sbjct: 477 EIRAMVTAMGTGIS-EDFDITKARYHKLVIMTDADVDGAHIRILLLTFFFRFMKPLIENN 535
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPL+K+++GK V Y Y D EL K++ + + IQR+KGLGEM QLW+TT
Sbjct: 536 YIYIAQPPLFKIKKGKDVYYAYSDEELAKIQDKIGRDKV-EIQRYKGLGEMNADQLWDTT 594
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++P +R + Q+ ++DA A+ +F+ LMG V+ R+E I +NA + NLD
Sbjct: 595 MDPAKRTILQVTMDDAIRADELFTILMGDMVEPRREFIHENAKYVRNLD 643
>gi|238926604|ref|ZP_04658364.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
gi|238885550|gb|EEQ49188.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
Length = 685
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 336/645 (52%), Positives = 437/645 (67%), Gaps = 26/645 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 54 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVGV 113
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 114 TIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 170
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS ++V V RDG + +SRG VTT H + + D GTR+ F PD ++
Sbjct: 171 VSVVNALSTEMDVEVRRDGKIFAISFSRG--VTTTKLH--EIGTSDTTGTRVHFVPDPEI 226
Query: 244 FT-TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
FT T FD T+ R+RELAFLN +TI L E +++ + F GG+ +V LN
Sbjct: 227 FTVTTYSFD--TLKHRLRELAFLNHGITITLTDERGAEVRSE--TFHFDGGIRSFVSHLN 282
Query: 303 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +L
Sbjct: 283 RKKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIAL 341
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +V
Sbjct: 342 TRAANDFARRLNVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIV 401
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D V E LTEY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLAD
Sbjct: 402 DSIVTEGLTEYFEENPAVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLAD 461
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+
Sbjct: 462 CSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRT 521
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY K L D G +Y+
Sbjct: 522 MITAFGTGI-GEEFDLAKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYI 580
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NPE
Sbjct: 581 AQPPLYQIRKDKKHFYTYSDDEQAKKLDELGRDGV-TIQRYKGLGEMNPEQLWETTMNPE 639
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 GRTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENAKLVRNLD 684
>gi|414154088|ref|ZP_11410408.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454273|emb|CCO08312.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 638
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/646 (50%), Positives = 438/646 (67%), Gaps = 29/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY I V
Sbjct: 7 TNKYSADQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCDKIAVT 66
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS IP+D+HP K A+E VLT+LHAGGKFGG S LHGVG+
Sbjct: 67 VHRDNSVTVEDNGRGIPVDIHPKVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGV 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L V + R+G Y Q+++RG P T L + GT++ F PD ++F
Sbjct: 125 SVVNALSEILSVEIKRNGHIYRQEFARGIPTTELKI----IGKSKSTGTKVTFKPDAEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ F T+ RIRELA+LN + I L+ E DP Q + F GG++++V+ LN
Sbjct: 181 EELV-FSLETLTQRIRELAYLNKGVKITLKDERKDPPVEQV--FQFEGGIKDFVKHLNKT 237
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+ LH + G R+ V ++ ALQ+ +D Y++TML YAN+I T+DGGTH G+K +
Sbjct: 238 KQVLHPKPIYISGEREQV---IVEAALQY-NDGYTETMLSYANNIHTVDGGTHEIGLKTA 293
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N G+ +K+ D +L+GE +REG T +ISV+VP P+FEGQTKT+LGN EVR +
Sbjct: 294 LTRVVNDYGRNHNILKNNDANLTGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGI 353
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ E + +L+ +P V I+ K+++A + AA++AR+L R+KS L + SLPGKLA
Sbjct: 354 VESIFAEKFSTFLDENPSVAKKIIEKAVTAARVREAARKARELTRRKSALETMSLPGKLA 413
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE+ + NEEI+
Sbjct: 414 DCSEKDPSISELYLVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARMDKILANEEIR 473
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLL+TFFYR+ + L + G +Y
Sbjct: 474 AMITALGTGI-GEDFDLNKARYHKIIIMTDADVDGAHIRTLLMTFFYRHMRPLIEAGYLY 532
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
V PPL++V +G Y Y + EL+++ + + +IQR+KGLGEM P QLWETT++P
Sbjct: 533 VAQPPLFRVRKGNLDSYVYSEKELEELLKRIGHDKV-NIQRYKGLGEMNPEQLWETTMDP 591
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R + Q+ ++DA EA+ FS LMG RV+ R++ IQ A V NLD
Sbjct: 592 DTRTMLQVTLQDAIEADATFSMLMGDRVEPRRDFIQENARYVRNLD 637
>gi|78707359|gb|ABB46485.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707361|gb|ABB46486.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707363|gb|ABB46487.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 321/633 (50%), Positives = 421/633 (66%), Gaps = 24/633 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL- 135
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 5 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 64
Query: 136 ------ADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 65 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 122
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 123 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 178
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 179 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 236
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 237 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 295
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 296 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 353
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 354 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 413
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEI+IVEGDSAGGSAKQGRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+
Sbjct: 414 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAM 473
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ E F RYHKI+I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPL
Sbjct: 474 GTGISDE-FDITKARYHKIVIMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPL 532
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ G+ QY Y++ EL ++ + + SIQR+KGLGEM QLW+TT++P +R L
Sbjct: 533 YKISWGRNFQYAYNEQELNELLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLL 590
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
Q+ +EDA EA+ VFS LMG V+ RKE IQN A
Sbjct: 591 QIKLEDAIEADQVFSMLMGEEVEPRKEFIQNNA 623
>gi|219851686|ref|YP_002466118.1| DNA gyrase subunit B [Methanosphaerula palustris E1-9c]
gi|219545945|gb|ACL16395.1| DNA gyrase, B subunit [Methanosphaerula palustris E1-9c]
Length = 665
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 322/674 (47%), Positives = 450/674 (66%), Gaps = 51/674 (7%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++++Y + I VLEGL+ VR+RPAMYIGST RGLHHLVYE++DNAVDEA AG+ I +
Sbjct: 1 MTESYDASHITVLEGLQPVRERPAMYIGSTDTRGLHHLVYEVVDNAVDEALAGFCDLISI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP+D KSALETVLT+LHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 TINRDGSCTVDDNGRGIPVDKMQKNGKSALETVLTILHAGGKFDKNT--YQVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHV-------------------LP 224
+SVVNALS SL V+RDG Y ++++GK V+ L+ H
Sbjct: 119 VSVVNALSVSLVADVFRDGNRYRMEFAQGKVVSPLSVHKETLSELLERYRRRYRSEPPRE 178
Query: 225 VDSKDR---------QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 275
V++K+ GT I F PD +F T + FD++ + R+RE+AFLN +TI +
Sbjct: 179 VETKEALFADEGAKLSGTIITFQPDDSIFET-VTFDYDVLVHRLREMAFLNRGITIRI-- 235
Query: 276 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGF-RKDVDG-ITIDLALQWCSD 332
+D +E+ + GGL E+VQ+L ++ LH DV+ RKD + + +++ALQ+ +
Sbjct: 236 --TDLRSGDKDEFHYDGGLREFVQYLIDGREVLHPDVIDLSRKDEENKLEVEVALQY-TQ 292
Query: 333 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 392
+Y++T+ + NS+ T +GGTH+EG ++++TR +N+ +K+ +K+ ++L GE VREGLT
Sbjct: 293 SYTETVYTFVNSVNTREGGTHLEGFRSAITRAINNSARKANLIKNNTLTLRGEDVREGLT 352
Query: 393 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 452
+IS+++ NP+FEGQTK RLGN VR +VD V + L+EY E +P + +I K+ A +
Sbjct: 353 AVISIKLANPQFEGQTKMRLGNSNVRGIVDSLVYQSLSEYFEENPKSIAAIFEKATVAAQ 412
Query: 453 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 512
A AA+ AR+L R+KS L SS LPGKLADCS P +SE++IVEGDSAGGSAKQGR+RRF
Sbjct: 413 AREAARNARELARRKSTLESSGLPGKLADCSERDPAKSEVYIVEGDSAGGSAKQGRNRRF 472
Query: 513 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 572
QAILPLRGKILNVE+ + M K+ EIQ LI A+G G+ G+ RYH I+++TDAD
Sbjct: 473 QAILPLRGKILNVEKATQHKMIKSVEIQVLISAIGAGI-GDRMDANRARYHHIVLMTDAD 531
Query: 573 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 632
VDGAHI+TLLLTFFYRY L + G +Y+ PPL+++ +GKQV+Y Y + E++++ + F
Sbjct: 532 VDGAHIQTLLLTFFYRYMPELIERGYVYIAQPPLFRIAKGKQVRYVYREEEMQQISAEFG 591
Query: 633 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 692
+ ++QR+KGLGEM QLWETT+NP+ R+LKQ+ IEDA AN +F LMG V RK
Sbjct: 592 DKGV-TVQRYKGLGEMNADQLWETTMNPDTRVLKQIRIEDAGYANEIFEKLMGEDVSARK 650
Query: 693 ELI-QNAANLVNLD 705
I ++A + NLD
Sbjct: 651 NFILRHAKEVTNLD 664
>gi|294495525|ref|YP_003542018.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
gi|292666524|gb|ADE36373.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
Length = 634
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/640 (49%), Positives = 439/640 (68%), Gaps = 24/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY ++I+V++
Sbjct: 7 YDATHIQVLEGLEAVRKRPSMYIGSIDGRGLHHLVYEVVDNSIDEALAGYCTSIDVSINR 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP D+H KSALE V+T+LHAGGKF SS Y VSGGLHGVG+SVV
Sbjct: 67 DGSVTVRDDGRGIPTDIHSKYKKSALEVVMTILHAGGKFDKSS--YKVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +V V R+G ++Q+Y RGKP+ V+ + GT + F PD +F T
Sbjct: 125 NALSEWNDVEVHRNGKIFYQRYVRGKPLD----DVIEKGDTESTGTSMTFKPDTDIFET- 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F+ T+ R+RELAFLN + I + + SD + EY GG+ +V++LN +
Sbjct: 180 VDFNFETLVTRLRELAFLNRGIKIVITDKRSDEPLQEVFEY--DGGIVSFVEYLNKSRNV 237
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + F ++ + +++A+Q+ +D+Y + + +AN+I T +GGTH+ G K++LTR N
Sbjct: 238 LHEQPIYFEREKEDTRVEIAMQY-TDSYGEYVYSFANNINTHEGGTHLAGFKSALTRVAN 296
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K + K DI LSG+ +REGL IISV++ +P+FEGQTKT+LGN E++ +VD V
Sbjct: 297 DYAKSNNLAK-GDIKLSGDDIREGLAGIISVKLMDPQFEGQTKTKLGNSELKGIVDSMVS 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+E++E +P + +IL K++ A +A AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 356 EGLSEFMEENPKIASAILQKAMDARRAREAAKKARELTRRKSALEVSTLPGKLADCSEKD 415
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SEI++VEGDSAGGSAK GRDRRFQAILP RGKILNVE+ A + KN EI +LI A+
Sbjct: 416 PSVSEIYLVEGDSAGGSAKMGRDRRFQAILPFRGKILNVEKSRLARILKNNEILSLITAM 475
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+++ RYHK++I+TDADVDGAHIRTL+LTFF+RY L D G +Y+ PPL
Sbjct: 476 GTGI-GDEYDLTKARYHKVVIMTDADVDGAHIRTLMLTFFFRYMTPLIDAGYVYIAQPPL 534
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y +++GK ++ Y + E ++ + SIQR+KGLGEM P QLWETT+NP+ R +
Sbjct: 535 YSIKKGKNQRFAYTEREKDRIIEEIGEKGV-SIQRYKGLGEMNPDQLWETTMNPQTRTIL 593
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA A+ +FS LMG V R++ IQ +A +++NLD
Sbjct: 594 QVTMEDAVAADEMFSVLMGDEVAPRRKFIQEHAKDVINLD 633
>gi|371777742|ref|ZP_09484064.1| DNA gyrase subunit B [Anaerophaga sp. HS1]
Length = 656
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 319/647 (49%), Positives = 440/647 (68%), Gaps = 26/647 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY +I+V +
Sbjct: 17 YSASSIQVLEGLEAVRKRPAMYIGDIGQKGLHHLVYEVVDNSIDEALAGYCDSIQVTINE 76
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 77 DGSITVVDNGRGIPVDFHEKEGKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 134
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SL+ V RDG + Q+Y RGKP+ + V + D+ GT I F PD +F
Sbjct: 135 NALSSSLKAEVRRDGKIFRQEYERGKPL----APIREVGTTDQTGTAITFMPDSTIFNNT 190
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
++ ++ +AGR+RELAFLN L I L K + D E N +E F++ GL E+V +++ ++
Sbjct: 191 -EYKYSVLAGRMRELAFLNAGLEIILTDKREKDEEGNFKSERFYSKDGLIEFVNFIDDNR 249
Query: 306 KPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+PL + F V + I +D+A+ + + ++++ + Y N+I TI+GGTH+ G + LTRT
Sbjct: 250 EPLIEKPIFISTVKNDIPVDIAILYNT-SFNENVYSYVNNINTIEGGTHLTGFRRGLTRT 308
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L + +KS +SG+ REGLT +ISV+V P+FEGQTKT+LGN +V VDQ+
Sbjct: 309 LKNWAEKSGMFSKLKFDISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSDVSLAVDQA 368
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V L+ YLE +P +I++K + A A AA++AR+LV++KSVL LPGKLADCS
Sbjct: 369 VSTMLSNYLEENPKDAKAIVNKVILAATARHAARKARELVQRKSVLSGGGLPGKLADCSV 428
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE++EIF+VEGDSAGG+AKQGRDRRFQAILPLRGKILNVE+ + +++NEEI+N+
Sbjct: 429 RDPEKAEIFLVEGDSAGGTAKQGRDRRFQAILPLRGKILNVEKALQHKVFENEEIKNIFT 488
Query: 545 ALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
ALG+ + E+ K + LRYHKI+I+TDADVDG+HI TL++TFF+RY K L +G +Y
Sbjct: 489 ALGVTIGTEEDSKALNLDKLRYHKIVIMTDADVDGSHIATLIMTFFFRYMKDLIKKGYLY 548
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA--LYSIQRFKGLGEMMPVQLWETTL 658
+ PPLY +++GK +YC+ DA+ ++ + + +QR+KGLGEM QLW TT+
Sbjct: 549 IATPPLYFLKKGKIEEYCWTDAQRREFIEKYANGKEDTVHVQRYKGLGEMNAEQLWMTTM 608
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
NPE+R+L+Q+ E+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 609 NPEKRLLRQVTYENAAEADRIFSMLMGDDVPPRREFIEKNATYANID 655
>gi|162446893|ref|YP_001620025.1| DNA gyrase subunit B [Acholeplasma laidlawii PG-8A]
gi|161985000|gb|ABX80649.1| DNA gyrase, subunit B [Acholeplasma laidlawii PG-8A]
Length = 635
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 321/633 (50%), Positives = 421/633 (66%), Gaps = 24/633 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL- 135
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 9 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 68
Query: 136 ------ADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 69 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 127 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 183 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 240
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 241 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 300 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 358 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEI+IVEGDSAGGSAKQGRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+
Sbjct: 418 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAM 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ E F RYHKI+I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPL
Sbjct: 478 GTGISDE-FDITKARYHKIVIMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ G+ QY Y++ EL ++ + + SIQR+KGLGEM QLW+TT++P +R L
Sbjct: 537 YKISWGRNFQYAYNEQELNELLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLL 594
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
Q+ +EDA EA+ VFS LMG V+ RKE IQN A
Sbjct: 595 QIKLEDAIEADQVFSMLMGEEVEPRKEFIQNNA 627
>gi|164686442|ref|ZP_02210470.1| hypothetical protein CLOBAR_00007 [Clostridium bartlettii DSM
16795]
gi|164604453|gb|EDQ97918.1| DNA gyrase, B subunit [Clostridium bartlettii DSM 16795]
Length = 633
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 338/644 (52%), Positives = 441/644 (68%), Gaps = 23/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVR RP MYIGSTGPRGLHHLVYEI+DN++DEA GY I V
Sbjct: 1 MKQEYGANQIQVLEGLEAVRLRPGMYIGSTGPRGLHHLVYEIVDNSIDEALQGYCDRIYV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP++ HP T KS LETVLT+LHAGGKFGG S LHGVG
Sbjct: 61 CINEDGSVTTKDDGRGIPVETHPKTGKSTLETVLTILHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVN LSE L V+R+G Y Q Y +G + L V D GT I+F PD +
Sbjct: 119 ISVVNGLSEWLVAEVYRNGKIYRQSYKKGITDSELEI----VGESDHTGTIIQFMPDATI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I FD+ T+ R+RELAFLN + I ED P + Q E+ + GG+ E+V++LN+
Sbjct: 175 FDD-IVFDYKTLETRLRELAFLNKGVRIVF--EDKRPGQEQKKEFLYDGGIREFVEYLNS 231
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K P+H+ VV K + +++A+Q+ +D YS+ +L +AN+I T +GG H+ G KA+LT
Sbjct: 232 TKTPIHENVVYIDKKIQDCMVEIAIQY-TDGYSENILSFANNIDTHEGGAHLAGFKAALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T+N K++K +K+ D +LSGE +REGLT ++SV++P+P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNEYAKRNKLLKENDANLSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNTRMRGIVD 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L +LE +P I+ K+L A +A AAKRAR+L R+K+VL S+SLPGKLADC
Sbjct: 351 AVTVEELGAFLEENPQTSRIIVDKALRAQRAREAAKRARELTRRKTVLESTSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++EI+N+
Sbjct: 411 AEKDPAKSEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKSRLDRILSSDEIKNM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G GV G DF E RYHKI+I+TDADVDGAHIRTLLLTFF+RY + L D G +Y+
Sbjct: 471 ITAYGCGV-GNDFDLEKARYHKIVIMTDADVDGAHIRTLLLTFFFRYMRPLIDNGYVYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV++ K+ Y Y D +L+ + + + +QR+KGLGEM P QLWETT+NPE
Sbjct: 530 QPPLYKVKKQKKEYYVYSDKQLEALLEEIGKSGI-ELQRYKGLGEMNPEQLWETTMNPET 588
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L Q+ I+DA EA+ +FS LMG +V RKE I+ A V NLD
Sbjct: 589 RTLLQVTIDDATEADRIFSMLMGDKVGPRKEFIEENAEFVKNLD 632
>gi|160914817|ref|ZP_02077031.1| hypothetical protein EUBDOL_00824 [Eubacterium dolichum DSM 3991]
gi|158433357|gb|EDP11646.1| DNA gyrase, B subunit [Eubacterium dolichum DSM 3991]
Length = 648
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/651 (48%), Positives = 445/651 (68%), Gaps = 24/651 (3%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E + V +Y ++ IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG
Sbjct: 10 EEMENGKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAG 69
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+A++IE+A+ DN I P+ + T S +ET+ TVLHAGGKFGG + Y VS
Sbjct: 70 FATDIEIAIEKDNVIRVEDNGRGMPVGIVEKTGISGVETIFTVLHAGGKFGGGA--YKVS 127
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRI 235
GGLHGVG SVVNALSE LEVTV ++G ++ ++ G KP L + D+ G+ +
Sbjct: 128 GGLHGVGASVVNALSEWLEVTVHQNGKKHFLRFENGGKPSGALKV----IGDTDKHGSVV 183
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
RF D +FT + +T+ RIR+LAFLN + + + D E+ + EY + GG+
Sbjct: 184 RFKADASIFTETQVYSFDTLNTRIRQLAFLNKGIRLVII--DEREEEAKRIEYKYDGGIR 241
Query: 296 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
+YV++LN +K LH DV+ +GI ++ALQ+ +D Y + + N+I T++GGTH
Sbjct: 242 QYVEYLNKNKNVLHEDVIYVEGLEEGILAEVALQY-NDGYMPNIYSFCNNINTMEGGTHE 300
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G + +LTR +N+ +++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN
Sbjct: 301 DGFRLALTRVINAYARENNLIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGN 359
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EVRK+V + + L +L +P I+ K + A KA +AAK+AR+L R+KS L +S
Sbjct: 360 SEVRKIVSGILGDQLERFLIENPTTAKIIVEKGVLASKARMAAKKARELTRRKSALEITS 419
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQAILPLRGKILNVE+ ++
Sbjct: 420 LPGKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAILPLRGKILNVEKARLHRIF 479
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+N EI++++ A G G+ G++ LRYHKI+I+TDADVDGAHI TL+LTFFYR+ + +
Sbjct: 480 ENNEIRSMVTAFGCGI-GDEIDISKLRYHKIVIMTDADVDGAHICTLMLTFFYRFLRPVI 538
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G +Y+ +PPL+KV +G +V+Y Y + E+++V++ N ++QR+KGLGEM P QLW
Sbjct: 539 EGGYVYIAMPPLFKVAKGNRVEYVYKEEEMERVRAEMGENV--NVQRYKGLGEMNPEQLW 596
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
ETT++P R LKQ+ IEDA EA+ +F LMG V+ R+E IQ A LD
Sbjct: 597 ETTMDPAFRTLKQVNIEDAVEADAIFEMLMGEEVEPRREFIQENAKYATLD 647
>gi|410453633|ref|ZP_11307580.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
gi|409932961|gb|EKN69911.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
Length = 640
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/644 (51%), Positives = 446/644 (69%), Gaps = 22/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V ++YG++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+ I V
Sbjct: 7 VEESYGADQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGHCDEINV 66
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 67 IIEEDNSITVKDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS LEV V RDG ++ K+ RG V L + + D GT F PD ++
Sbjct: 125 ASVVNALSTELEVYVHRDGKIHYIKFERGAVVKELAV----IGTTDHTGTITHFKPDSEI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++++++ +A RIRELAFLN L I + ED E N+ NEY + GG++ YV+ LN
Sbjct: 181 FTETLEYEYDILATRIRELAFLNRGLKITI--EDKRVE-NKRNEYHYEGGIKSYVEHLNR 237
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +HD + + DGI++++ALQ+ ++ Y+D + +AN+I T +GGTH G K +LT
Sbjct: 238 TKEVIHDEPIYMEGEKDGISVEVALQY-NEGYTDNIYSFANNIHTYEGGTHESGFKTALT 296
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +K+ D +LSGE VREG+T I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 297 RVINDYARKNGLIKENDTNLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNSEVRAITD 356
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+++ +P V I+ K L A +A LAAK+AR+L R+KS L SSLPGKLADC
Sbjct: 357 TVFASTFDKFMLENPTVAKKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P ESE+FIVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +
Sbjct: 417 SSKDPAESEMFIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNLEVRAM 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ GEDF RYHK++I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 477 ITAIGTGI-GEDFDIAKARYHKVVIMTDADVDGAHIRTLLLTFFYRFMRKLIEAGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV++GK+++Y Y+D EL+++ + P+ +IQR+KGLGEM P QLW+TT+NPE
Sbjct: 536 QPPLYKVQQGKRIEYAYNDKELERIFAELPATPKPNIQRYKGLGEMNPEQLWDTTMNPEG 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R + Q+ +EDA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 596 RSMLQVSLEDAIEADETFDMLMGEKVEPRRNFIEENAQYVKNLD 639
>gi|302340767|ref|YP_003805973.1| DNA gyrase subunit beta [Spirochaeta smaragdinae DSM 11293]
gi|301637952|gb|ADK83379.1| DNA gyrase, B subunit [Spirochaeta smaragdinae DSM 11293]
Length = 636
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/646 (50%), Positives = 446/646 (69%), Gaps = 24/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ +Y ++ IQVL+GL+AVRKRP MYIGSTGP GLHHLVYEI+DN++DEA AG+ I V
Sbjct: 1 MQNSYSAQNIQVLKGLDAVRKRPGMYIGSTGPEGLHHLVYEIVDNSIDEALAGFCDEILV 60
Query: 133 AL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ + DN IP DLH SALE V+T LHAGGKF + Y VSGGLHGVG
Sbjct: 61 VIEKGNIIRVEDNGRGIPTDLHKEEGVSALEIVMTKLHAGGKFNKDT--YKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +V V RDG ++QKY RG P V V R GT RF PD ++
Sbjct: 119 VSVVNALSEWCDVFVHRDGSIFYQKYDRGNP----EKDVATVGETTRHGTITRFKPDGEI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T ++F + ++ R+RELAFLN + I + ED + + E+ F GG++ +V +L+
Sbjct: 175 FET-VEFSFDVLSRRLRELAFLNKGIRIII--EDERLPQKKTKEFQFEGGVKSFVSFLSE 231
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
KKP+H + + F DGI ++ AL++ ++ YS+ + + N+I T +GGTH+ G K +LT
Sbjct: 232 SKKPIHKEPIYFEGIRDGIDLECALEY-NEGYSENIFSFVNNINTREGGTHLVGFKTALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT N KKSK K D + SG+ VREGLT ++SV+VP+P+FEGQTK +LGN EVR VV+
Sbjct: 291 RTFNDFLKKSKFAKKMDETFSGDDVREGLTAVVSVKVPDPQFEGQTKAKLGNSEVRGVVE 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E+LT Y E +P +++ IL K A +A +AA++ARDL R+KS L SSSLPGKLADC
Sbjct: 351 SLVAEHLTYYFEENPKLIEKILEKITMAARARIAARKARDLTRRKSALESSSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P +SE++IVEGDSAGGSAKQGRDR+FQAILPL GK+LNVE+ + N+++Q +
Sbjct: 411 AEKDPSKSEVYIVEGDSAGGSAKQGRDRQFQAILPLWGKMLNVEKTRADKVLTNDKLQPI 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I LG G G++F +RYHK+II+ DADVDG+HIRTLLLTFF+RY L + G +Y+
Sbjct: 471 IATLGAGA-GKEFDISKVRYHKVIIMADADVDGSHIRTLLLTFFFRYMPELVERGYVYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNA-LYSIQRFKGLGEMMPVQLWETTLNP 660
+PPLYK++ GK + Y YD+ + +K+ KS F +IQR+KGLGEM P QLWETT++P
Sbjct: 530 MPPLYKMQLGKSITYAYDERDREKIMKSLFAEETEKVAIQRYKGLGEMNPNQLWETTMDP 589
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R + Q+ +EDA EA+ +FS+LMG V+ R++ I++ A +V NLD
Sbjct: 590 DSRKIMQVRLEDAVEADQIFSTLMGEDVEPRRKFIEDNALMVSNLD 635
>gi|325299173|ref|YP_004259090.1| DNA gyrase subunit B [Bacteroides salanitronis DSM 18170]
gi|324318726|gb|ADY36617.1| DNA gyrase, B subunit [Bacteroides salanitronis DSM 18170]
Length = 654
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 323/650 (49%), Positives = 428/650 (65%), Gaps = 28/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 12 TYSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y+ GKP+ V V + D GTR FWPD +FT
Sbjct: 130 VNALSTHMITNVFRNGKIYQQEYACGKPLYP----VKEVGTTDITGTRQTFWPDASIFTV 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 304
++ +N + R+RELA+LN +TI L + E Y + F G++E+V++LN+
Sbjct: 186 T-EYKYNILQARMRELAYLNKGITITLTDKREKEEDGSYKQEVFHSEEGVKEFVRFLNST 244
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
PL DV+ + G+ I+ A+ + + + + + Y N+I TI+GGTH G + +LTR
Sbjct: 245 NTPLIDDVIYLNTEKQGVPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
L + SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q
Sbjct: 304 VLKKYAEDSKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S TPEE E+F+VEGDSAGGSAKQGR R+FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SRTPEECELFLVEGDSAGGSAKQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GV-KGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ALG+ GV ED KK + LRY+K+II+TDADVDG+HI TL++T FYRY + G
Sbjct: 484 QALGVRFGVDDSEDSKKANIDKLRYNKVIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGG 543
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWE 655
+Y+ PPLYK +GK +YCY D E + + I QR+KGLGEM P QLWE
Sbjct: 544 HLYIANPPLYKCSKGKVSEYCYTDEERQAFMQKYGDGTETGIHTQRYKGLGEMNPEQLWE 603
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R+LKQ+ IE+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 604 TTMNPETRILKQVSIENAAEADYIFSMLMGDDVAPRREFIEKHATYANID 653
>gi|393809323|gb|AFN25835.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809333|gb|AFN25840.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809337|gb|AFN25842.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809341|gb|AFN25844.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V + YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHLNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ +HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KESIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K+GRD + QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ + I R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M+ Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 MMLQVKLEDAVEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|134297887|ref|YP_001111383.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
gi|134050587|gb|ABO48558.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
Length = 638
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 330/640 (51%), Positives = 445/640 (69%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 10 YSADQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCDKIIVTIQE 69
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+DLHP + A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 70 DNSITVEDNGRGIPVDLHPKVGRPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ L V + R+G Y Q+YSRG P T L V + GT++ F PD+++F
Sbjct: 128 NALSKYLSVEIKRNGKIYKQEYSRGIPTTELQI----VGNSKTTGTKVTFKPDEEIFEEL 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F T++ RIRELA+LN + I L+ + DP Q +Y GG++++V+ LN +K+
Sbjct: 184 V-FSLETLSQRIRELAYLNKGIKIILQDKRKDPVAEQIFQY--DGGIKDFVKHLNRNKQT 240
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H + + + I +++A+Q+ +D Y++ ML YAN+I T+DGGTH G+K +LTR +N
Sbjct: 241 IHTKPIYVSGEKEQIVVEVAIQY-NDGYTENMLSYANNIHTVDGGTHEVGLKTALTRVIN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G++ +K+ D +LSGE +REG T +ISV+VP P+FEGQTKT+LGN EVR +VD
Sbjct: 300 DYGRQHGVLKNNDANLSGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVDSIFA 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+ YL +P V I+ K ++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 360 EKLSTYLVENPSVAKKIIEKGITAARAREAARKARELTRRKSALETMSLPGKLADCSEKD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SEI++VEGDSAGGSAKQGR+RRFQAILPL+GKILNVE+ + NEEI+ +I A+
Sbjct: 420 PSVSEIYLVEGDSAGGSAKQGRERRFQAILPLKGKILNVEKARMDKILANEEIRAMITAM 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF RYHKI+I+TDADVDGAHIRTLL+TFFYRY + L + G ++V PPL
Sbjct: 480 GTGI-GEDFDIAKARYHKIVIMTDADVDGAHIRTLLMTFFYRYMRQLIEAGYVFVAQPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V +GK YCY D EL+++ + + + +IQR+KGLGEM P QLWETT++P+ R +
Sbjct: 539 YRVRKGKHDSYCYSDNELEELLNRIGHDRV-NIQRYKGLGEMNPEQLWETTMDPDTRTML 597
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 598 QVTLEDAIEADATFSMLMGDRVEPRRDFIQENAKYVRNLD 637
>gi|392988234|ref|YP_006486827.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
gi|392335654|gb|AFM69936.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
Length = 648
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 325/647 (50%), Positives = 438/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I+V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIQVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKDGNVYYQEYRRGAVVDDLKI----IEQTDRNGTTVHFIPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T FD N +A RIRELAFLN + I++ ED E EY + GG++ YV++LN +
Sbjct: 185 TETTVFDFNKLATRIRELAFLNRGMKISI--EDKREESPVVKEYHYDGGIKSYVEYLNAN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + IT+++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDITVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A KA LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIIEKGLLASKARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK++ Y + +LK+V +S P+ S+QR+KGLGEM QLWETT++
Sbjct: 541 PPLYGVKQGKKITYVQPGKNAEEDLKQVVASLPATPKPSVQRYKGLGEMDDHQLWETTMD 600
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 601 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|315925615|ref|ZP_07921825.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621156|gb|EFV01127.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 668
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/654 (50%), Positives = 445/654 (68%), Gaps = 26/654 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
I +E K N YG++QIQVLEGLEAV++RP MYIGSTG +GLHHLVYE++DNA+DEA
Sbjct: 29 IMSETTKTN---HEYGADQIQVLEGLEAVKRRPGMYIGSTGSQGLHHLVYEVVDNAIDEA 85
Query: 123 QAGYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AGY I V++ DN+ IP ++ K+ +E LTVLHAGGKFGG
Sbjct: 86 LAGYCDKIIVSVDKDNAVTVMDDGRGIPTGINHKEGKTGVELALTVLHAGGKFGGGGYKV 145
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
S LHGVG+SVVNALSE L V V ++ Y Q + G + L V + +R GT
Sbjct: 146 SGG--LHGVGVSVVNALSEVLTVEVKQNKKVYRQTFEHGNKTSELDV----VGTTNRTGT 199
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
+I F PD ++F T + +D++ + R+RELAFLN + I L+ D P + Q EY +AGG
Sbjct: 200 KIYFKPDPEIFDTTV-YDYDVLEHRLRELAFLNKGVAITLK--DERPGQEQTGEYHYAGG 256
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
+ Y++++N +K PL+ + + K +D ++LA Q+ Y + + YAN+I T +GGT
Sbjct: 257 IRSYIEYMNRNKDPLYPQITYYEKAMDEYALELAFQYTR-GYQENIYSYANNIYTPEGGT 315
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H+ G K++LTRT+N+ +K+ +K D +LSG+ VREGLT +IS+++ P+FEGQTKT+L
Sbjct: 316 HLNGFKSALTRTINNYARKAGLLKQNDKNLSGDDVREGLTAVISIKLLEPQFEGQTKTKL 375
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GNPEV+ +V+ V E L+ +LE +P+V +I+ K++SA A +AAKRAR++ R+KS L +
Sbjct: 376 GNPEVKGIVETIVNEELSNFLEENPNVAKAIVEKNISASHARMAAKRAREMTRRKSALDA 435
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
+SLPGKLADC P +SEIFIVEGDSAGGSAK GRD R QAILPLRGKILNVE+
Sbjct: 436 TSLPGKLADCREKDPAQSEIFIVEGDSAGGSAKVGRDSRIQAILPLRGKILNVEKARLDR 495
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
M ++ I+ +I A G G+ GEDF E RYHKI+I+TDADVDGAHIRTLLLTFFYRY +
Sbjct: 496 MLTSDTIKGMITAFGTGI-GEDFDIEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRG 554
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L D G +Y+ PPLYKV GK V+Y YDDA+L + + + ++QR+KGLGEM Q
Sbjct: 555 LIDHGYVYIAQPPLYKVSWGKHVEYAYDDADLNR-RLEDKDRSRVTLQRYKGLGEMDAEQ 613
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
LWETT+NP+ R + ++ IEDA A+ +F+ LMG +V RKE I+ NA + NLD
Sbjct: 614 LWETTMNPDTRTMLRVGIEDATYADEIFTMLMGDKVQPRKEFIERNAKKVQNLD 667
>gi|357060838|ref|ZP_09121602.1| B subunit [Alloprevotella rava F0323]
gi|355375671|gb|EHG22954.1| B subunit [Alloprevotella rava F0323]
Length = 653
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 322/651 (49%), Positives = 438/651 (67%), Gaps = 29/651 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG TG RGLHHLVYE +DN++DEA AGY ++IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDTGERGLHHLVYETVDNSIDEALAGYCTHIEVTIC 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+HP ++SALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSIVVQDNGRGIPVDMHPKEHRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS ++ V+RDG Y Q+Y +GKP+ ++ V + +GTR +FWPD VF+T
Sbjct: 128 VNALSSHMKSQVFRDGKIYQQEYEKGKPLYSVKV----VGETELRGTRQQFWPDDTVFST 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN-QYNEYFFAGGLEEYVQWLNTDK 305
+++ T++ R+RELA+LN L I L D E N + E+F GL ++V++L++ +
Sbjct: 184 TT-YNYETLSNRMRELAYLNAGLKITLTDLRQDDEGNIRQQEFFSEQGLPQFVRYLDSSR 242
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L D V+ + +G+ ID+A+ + + Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 243 SHLFDDVIHISTNKNGLPIDVAVMYNT-GYAENIHSYVNNINTIEGGTHLTGFRQALTRV 301
Query: 365 LNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
L + +++ K ++ I +SGE REGLT +ISV+V P+FEGQTKTRLGN EV V+
Sbjct: 302 LKNYAEQTAAKQIEKAKIEISGEDFREGLTAVISVKVAEPQFEGQTKTRLGNSEVTGAVN 361
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
Q+V E T YLE HP I+ K + A A +AA++AR+ V++KS L LPGKLADC
Sbjct: 362 QAVGEAFTNYLEEHPKEAKLIVDKVILAATARIAARKARESVQRKSPLTGGGLPGKLADC 421
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS E E+F+VEGDSAGGSAKQGR RR QAILPLRGKILNVE+ ++++E+ N+
Sbjct: 422 SSKDAAECELFLVEGDSAGGSAKQGRSRRTQAILPLRGKILNVEKAMWHKAFESDEVNNI 481
Query: 543 IRALGL--GVKGE--DFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+A+G+ G+ GE + E LRYHKIII+ DADVDG HI TL++T FYRY L ++G
Sbjct: 482 IQAMGVRFGLDGESKEANIEKLRYHKIIIMADADVDGQHIATLIMTLFYRYMPQLIEDGY 541
Query: 599 IYVGVPPLY--KVERGKQVQYCYDD-AELKKVKS-SFPSNALYSIQRFKGLGEMMPVQLW 654
+Y+ +PPLY K ++G YCY++ A L+ +K S QR+KGLGEM P QLW
Sbjct: 542 LYIAMPPLYRCKSKKGNHEDYCYNEQARLQFIKDYGDGSEENIVTQRYKGLGEMNPSQLW 601
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
ETT+NPE R+LKQ+ +E+A+ A+ FS LMG V R+E I+ A N+D
Sbjct: 602 ETTMNPETRLLKQVTLENASNADFTFSMLMGEDVGPRREFIERNATYANID 652
>gi|189502463|ref|YP_001958180.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497904|gb|ACE06451.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
Length = 651
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/656 (49%), Positives = 440/656 (67%), Gaps = 35/656 (5%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ TY ++ IQVLEGLEAVRKRPAMYIG GP+GLHHLV+E++DN++DEA AGY + I+V
Sbjct: 7 LQNTYSADSIQVLEGLEAVRKRPAMYIGDIGPKGLHHLVWEVVDNSIDEALAGYCTTIKV 66
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ +DNSI P D+H +SALE V+TVLHAGGKF + Y VSGGLHGVG
Sbjct: 67 QIHSDNSITVSDNGRGIPTDIHAKEKRSALEVVMTVLHAGGKFDKGT--YKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+S VNALS L+ TV+RDG Y Q+Y++G P+ V V + +GT I F PD +
Sbjct: 125 VSCVNALSTHLQATVYRDGKIYQQEYAKGAPLYP----VKEVGTTTLRGTTIHFQPDDSI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWL 301
FTT ++++TIA R+ ELA+LN LTI L + D E N E F + GGL E+V +L
Sbjct: 181 FTTTT-YNYSTIAARLGELAYLNAGLTIELTDLREQDQEGNFLQETFHSEGGLAEFVAYL 239
Query: 302 NTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+ + +P++ + G + DV + +AL + + +++ ++ Y N+I TI+GGTH+ G
Sbjct: 240 DDAREKLIPQPIY-MEGEKYDV---PVQVALSYNT-GFTENVVSYVNNINTIEGGTHVAG 294
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ +LTRTL S +KS ++ + + G+ REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 295 FRRALTRTLKSYAEKSNLLEKAKVEIVGDDFREGLTAVISVKVSEPQFEGQTKTKLGNAE 354
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V VD V E L YLE HP I+SK + A +A AA++AR++V++K+VL LP
Sbjct: 355 VVGAVDSCVSETLQNYLEEHPQEAKIIVSKVILAAQARHAARKAREMVQRKNVLTGGGLP 414
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P E+++VEGDSAGG+AKQGRDRRFQAILPLRGKILNVE+ E +Y N
Sbjct: 415 GKLADCSDNDPAACELYLVEGDSAGGTAKQGRDRRFQAILPLRGKILNVEKAQEHRIYDN 474
Query: 537 EEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
E+++N+I ALG+ E+ K E LRYHK+II+TDADVDG+HIRTL+LTFFYRY K
Sbjct: 475 EQLRNMIMALGITFGTEEDAKAVNLEKLRYHKVIIMTDADVDGSHIRTLILTFFYRYLKV 534
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAE-LKKVKSSFPSNALYS--IQRFKGLGEMM 649
L + G +Y+ +PPLY V+RG + +YC+ + + + VK P S IQR+KGLGEM
Sbjct: 535 LLERGFLYIALPPLYLVKRGSESRYCWTEQDRIAAVKDFSPDGKTESVNIQRYKGLGEMN 594
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW TT++P R LKQ+ IE AAEA+ +FS LMG V R++ IQ A +D
Sbjct: 595 AEQLWTTTMDPAVRSLKQVTIESAAEADHLFSILMGDEVAPRRDFIQLHAKYAQID 650
>gi|380693260|ref|ZP_09858119.1| DNA gyrase subunit B [Bacteroides faecis MAJ27]
Length = 653
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 320/654 (48%), Positives = 442/654 (67%), Gaps = 29/654 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+RDG Y Q+Y GKP+ + V V D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLYS----VKEVGVSDITGTRQQFWPDDT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQ 299
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + + +E F++ GL E+V+
Sbjct: 182 IFTETV-YDYKILAARLRELAYLNAGLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVR 240
Query: 300 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 FIESSREHLINDVIYLNSEKQGIPIEIAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFR 299
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 RALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVM 359
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGK
Sbjct: 360 GAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGK 419
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++E
Sbjct: 420 LADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDE 479
Query: 539 IQNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
I+N+ ALG+ + ED KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 IRNIYTALGVTIGTEDDSKEANIEKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQII 539
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS---NALYSIQRFKGLGEMMPV 651
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM
Sbjct: 540 QNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGLENAVHT-QRYKGLGEMNAQ 598
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 QLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 652
>gi|284047394|ref|YP_003397733.1| DNA gyrase subunit B [Acidaminococcus fermentans DSM 20731]
gi|283951615|gb|ADB46418.1| DNA gyrase, B subunit [Acidaminococcus fermentans DSM 20731]
Length = 646
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/652 (50%), Positives = 446/652 (68%), Gaps = 31/652 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E V YG+EQIQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY
Sbjct: 10 EEIAVHGDYGAEQIQVLEGLEAVRKRPSMYIGSISGRGLHHLVYEVIDNSIDEALAGYCD 69
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I V + DNSI P+++H K A+E V+TVLHAGGKFG GY VSGGL
Sbjct: 70 HIRVIIHPDNSITVTDNGRGIPVEMH-KVGKPAIEVVMTVLHAGGKFG--DGGYKVSGGL 126
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS+ + V V ++G Y ++S+GK TT +V ++ GT + FWP
Sbjct: 127 HGVGVSCVNALSKKMVVEVKKNGKIYGIEFSKGK--TTRPLYVKGECPENETGTSVTFWP 184
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
D +FT + + ++T+ RIRELAFLN + I L +D Q + + GG+ +V+
Sbjct: 185 DDTIFTETV-YSYDTLKHRIRELAFLNKGVKIQL----TDERSGQDEVFHYEGGIVSFVE 239
Query: 300 WLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
++N K+PLH V G R+D +++A+Q+ +DAY++ + + N+I T +GGTH+
Sbjct: 240 FVNKGKEPLHAKPIYVEGERQDT---IVEVAMQY-TDAYTENIYTFVNNINTEEGGTHLA 295
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G+K +LTR +N +K+ +KD + +LSG+ VREGLTC++S++V P+FEGQTKT+LGN
Sbjct: 296 GLKQALTRCINDYARKNSLLKDNEDNLSGDDVREGLTCVMSLKVREPQFEGQTKTKLGNS 355
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR +VD V E LTEY E + V I+ K++ A +A AA++ARDL R+KS L SSL
Sbjct: 356 EVRGIVDNMVTEALTEYFEENAPVAKKIVEKAIMASRARSAARKARDLTRRKSALEVSSL 415
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS E+EI++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ M
Sbjct: 416 PGKLADCSSKNAAETEIYLVEGDSAGGSAKQGRDRNFQAILPLRGKILNVEKARLDKMLN 475
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
++EI+ +I A G G+ G++F RY KIII+TDADVDGAHIRTLLLTFFYRY K L
Sbjct: 476 SQEIRAMITAFGCGI-GDEFDIAKARYGKIIIMTDADVDGAHIRTLLLTFFYRYMKPLIQ 534
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
G +++ PPLY + GK+ Y Y D EL +K+ N Y +QR+KGLGEM P QLW
Sbjct: 535 NGNVFIAQPPLYLIRTGKKHTYAYSDEELQRKLDEVGRQNNPY-VQRYKGLGEMNPEQLW 593
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
ETT++P +R + Q+ +EDAA A+ VFS LMG +V+ R++ I +NA + NLD
Sbjct: 594 ETTMDPSKRTVLQVQLEDAATADSVFSVLMGDKVEPRRQFIEENAGKVTNLD 645
>gi|290968148|ref|ZP_06559693.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|335049908|ref|ZP_08542891.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
gi|290781823|gb|EFD94406.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|333762037|gb|EGL39553.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
Length = 640
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/643 (51%), Positives = 444/643 (69%), Gaps = 22/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN+VDEA AG+ ++IEV +
Sbjct: 7 KDYGAEQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEVVDNSVDEALAGFCTHIEVTI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
ADNSI P+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+S
Sbjct: 67 EADNSITVSDNGRGIPVAMH-KVGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGIS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS EV V RD + ++RG LT ++ + GT + F PD ++F
Sbjct: 124 VVNALSIQTEVKVKRDNYLWDISFARGITEKKLT-KTRALEPGEETGTTVHFKPDPEIFP 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +D +T+ R+RELAFLN L I L + E N+ Y + GGL +VQ+LN +K
Sbjct: 183 DVV-YDFDTLKTRLRELAFLNKGLHITLT---DNREHNKQEVYCYEGGLISFVQFLNENK 238
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H V+ + + + +D+A+Q+ +D YS+ +L + N I T +GGTH+ G +++LTRT
Sbjct: 239 QAVHPTVIPLDGEKNQVMVDIAMQY-NDGYSENILTFVNDIFTEEGGTHLSGFRSALTRT 297
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+ + +K+ + +LSGE VREGLT I+SV+V P+FEGQTKT+LGN EV+ +VD
Sbjct: 298 INDYGRSAGIIKENEDNLSGEDVREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGIVDTL 357
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L E+ HP SI++K+++A +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 358 VSDGLREFFGEHPVEAKSIVNKTITASRARQAARRARELTRRKNALEISSLPGKLADCSE 417
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ E +EI++VEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE+ + NEEI+ +I
Sbjct: 418 KSSERTEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKIINVEKARLDKILANEEIRAMIT 477
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYR+ K L EG +Y+ P
Sbjct: 478 AFGTGI-GEEFDITKRRYDKIIIMTDADVDGAHIRTLLLTFFYRFMKPLITEGHVYIAQP 536
Query: 605 PLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V +GKQ+ Y Y D + K+ +QR+KGLGEM P QLWETT++PE R
Sbjct: 537 PLYQVRKGKQMWYFYTDETMNAKLDELGRDTNNIVVQRYKGLGEMNPEQLWETTMDPEYR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA EA+ +FS LMG +V+ R++ IQ NA + NLD
Sbjct: 597 TMLQVHLEDAVEADRIFSVLMGDKVEPRRQFIQENAKKVRNLD 639
>gi|284161217|ref|YP_003399840.1| DNA gyrase subunit beta [Archaeoglobus profundus DSM 5631]
gi|284011214|gb|ADB57167.1| DNA gyrase, B subunit [Archaeoglobus profundus DSM 5631]
Length = 632
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/650 (51%), Positives = 432/650 (66%), Gaps = 36/650 (5%)
Query: 72 PVSKT------YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
P+S T Y +E I+VL+ ++AVRKRP MY+GSTG RG HHL++EI+DN++DEA AG
Sbjct: 2 PISSTFLAMSDYTAEAIEVLDDIQAVRKRPGMYVGSTGSRGFHHLLWEIVDNSIDEALAG 61
Query: 126 YASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
Y + I V L D S IP++ HP K ALE V+T LHAGGKF S Y VS
Sbjct: 62 YCNRIVVTLHKDGSASVEDNGRGIPVEEHPIFKKPALEIVMTKLHAGGKF--SKKAYKVS 119
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVGLSVVNALSE LEV V R+G Y+Q+Y RGKPVT L V GT+IR
Sbjct: 120 GGLHGVGLSVVNALSEWLEVWVKRNGKIYYQRYERGKPVTPLKV----VGETKETGTKIR 175
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F +FD++ +A R+RELAFLN L I L E + K Y+E G
Sbjct: 176 FKPDPEIFEVK-EFDYDVVAERLRELAFLNKGLRIKLIDERTGKVKEFYSEEGIVG---- 230
Query: 297 YVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+V++LN K + DVV + +GI +++A Q+ ++ + + +L +AN+I TI+GGTH+ G
Sbjct: 231 FVKYLNKGKDVITDVVYISGEKNGINVEIAFQFTNEDF-ENLLAFANNIHTIEGGTHVSG 289
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+A LTR +N GKK VK K +SG +REGLT ++SV+VP P+FEGQTKT+L N +
Sbjct: 290 FRAGLTRAINEYGKKH--VK-KFTPISGSDIREGLTAVLSVKVPEPQFEGQTKTKLTNSD 346
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V+ VV+ V +LE HP I+ K L A+KA A+RAR+LV++K+ + S +LP
Sbjct: 347 VKTVVESLVYNNFLRWLEEHPSEAQRIIEKCLLAMKAREMARRARELVKRKAEI-SLTLP 405
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS EE E+FIVEG+SAGGSAKQ RDRRFQA+LP+RGKI+NVE+ KN
Sbjct: 406 GKLADCSSKNVEERELFIVEGESAGGSAKQARDRRFQAVLPIRGKIINVEKAGMLRALKN 465
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EEI+ + A+G G+ G+DF +RY KIII+TDADVDGAHIRTLLLTFFYRY + L +
Sbjct: 466 EEIKAIASAIGGGI-GKDFDLSKVRYGKIIIMTDADVDGAHIRTLLLTFFYRYMRPLIEA 524
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ +PPLY+V++G +V Y Y + EL+ V +QRFKGLGEM P QLWET
Sbjct: 525 GMVYIALPPLYRVKKGDKVYYVYSEKELRDVLKKIGKA---EVQRFKGLGEMNPEQLWET 581
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+NP+ R L ++ IEDA A +F LMG VD RKE I N A V NLD
Sbjct: 582 AMNPKTRKLVKVTIEDALIAEKMFRILMGENVDERKEFILNHAKEVKNLD 631
>gi|348025743|ref|YP_004765548.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
gi|341821797|emb|CCC72721.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
Length = 639
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/644 (50%), Positives = 449/644 (69%), Gaps = 28/644 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 8 YGAEQIQVLEGLEAVRKRPGMYIGSTSTRGLHHLVYEVVDNSIDEALAGYCTHIEVTIQE 67
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV
Sbjct: 68 DNSITVVDNGRGIPVAMH-KIGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +V V RDG + ++RG L + P+++ + GT++ F PD ++F
Sbjct: 125 NALSVWTKVQVKRDGYLWGISFTRGVTDEPLR-KIRPLEAGEETGTKVSFKPDHEIFPDT 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +D NT+ R+RELAFLN L I L + + + Y + GGL +V++LN +
Sbjct: 184 V-YDFNTLKTRLRELAFLNKGLHITLTDKRGE---GKSEVYCYEGGLTSFVEFLNQSHQA 239
Query: 308 LHDVVGFRKDVDG----ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ + +VDG + +D+A+Q+ +D YS+ +L + N I T +GGTH+ G ++ LTR
Sbjct: 240 VNPTI---INVDGEKNKVIVDIAMQY-NDGYSENILTFVNDIFTEEGGTHLSGFRSGLTR 295
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N G+ + +K+ + +LSGE VREGLT +ISV+V P+FEGQTKT+LGN EV+ +VD
Sbjct: 296 TINDYGRSAGIIKENEDNLSGEDVREGLTAVISVKVREPQFEGQTKTKLGNSEVKGIVDN 355
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ + L E+ E HP +I++K++SA +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 356 IISDGLKEFFEEHPSEAKAIITKTISASRARQAARRARELTRRKNALEISSLPGKLADCS 415
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P+++EI++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE+ + N+EI+++I
Sbjct: 416 EKNPDQTEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARLDKILANDEIRSMI 475
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G++F RY KIII+TDADVDGAHIRTLLLTFFYR+ K L +G +Y+
Sbjct: 476 TAFGTGI-GQEFDLSKRRYDKIIIMTDADVDGAHIRTLLLTFFYRFMKPLITDGHVYIAQ 534
Query: 604 PPLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V +GKQV Y Y D ++ K+ N +QR+KGLGEM P QLWETT++PE
Sbjct: 535 PPLYQVRKGKQVWYFYTDESMQAKLDELGRDNNSVVVQRYKGLGEMNPEQLWETTMDPEN 594
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R + ++ +EDAAEA+ +FS LMG +V+ R++ I +NA + NLD
Sbjct: 595 RTMLKVELEDAAEADRIFSVLMGDKVEPRRKFIEENAKKVRNLD 638
>gi|357051619|ref|ZP_09112793.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
gi|355379543|gb|EHG26700.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
Length = 649
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 325/647 (50%), Positives = 438/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V
Sbjct: 12 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATAIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEEDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVEDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T F+ + +A R+RELAFLN L I++ ED E EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEHPVLKEYHYDGGIKSYVEHLNAS 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + + + GIT++++LQ+ +D+Y + +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPEPIYLEGEQQGITVEVSLQY-TDSYHNNLLSFANNIHTYEGGTHESGFKTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ T++L +P V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPAVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 TAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + +LK S P+ S+QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPSVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|258646055|ref|ZP_05733524.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
gi|260403425|gb|EEW96972.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
Length = 649
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/641 (51%), Positives = 446/641 (69%), Gaps = 25/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV L
Sbjct: 21 YGAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVTLND 80
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP LH T K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV
Sbjct: 81 DGSCTITDNGRGIPTGLH-ETGKPAMEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVV 137
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
ALSE VTV R+G + K +RG +T H+ GT++ F PD ++F
Sbjct: 138 TALSEWTTVTVKREGHFHEMKLARG----VVTQHMKTFGETTETGTQVTFKPDGEIFKEG 193
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
FD++T+ R+RELAFLN LTI L D + + +AGG+ E++++LN + K
Sbjct: 194 TDFDYDTLKVRMRELAFLNKGLTITLT--DVRDGATHQDVFCYAGGIVEFIKFLN-EGKD 250
Query: 308 LHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L D V+ F + D + +D+A+Q+ + YS++M + N+I T++GG H+ G + +LTRT+
Sbjct: 251 LVDPGVISFEGEKDRVIVDIAMQYQA-GYSESMYTFVNNINTVEGGMHLTGFRNALTRTI 309
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N + + +K + +LSG+ VREGLTC+ISV+VPNP+FEGQTKT+LGN +V+ +VD V
Sbjct: 310 NDYARSNNLLKPNEENLSGDDVREGLTCVISVKVPNPQFEGQTKTKLGNQDVKGIVDTIV 369
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L YLE HP I+SKS++A +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 370 SDGLRTYLEEHPAEAKEIISKSITANRAREAARRARELTRRKNALEVSSLPGKLADCSEK 429
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P+ +EI+IVEGDSAGGSAK GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A
Sbjct: 430 DPKFTEIYIVEGDSAGGSAKSGRDRRYQAILPLRGKILNVEKARLDKVLNSDAIRTMITA 489
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G GV EDF + LRY+KIII+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PP
Sbjct: 490 FGTGV-AEDFDIKKLRYYKIIIMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAQPP 548
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V +G+Q Y YDD E K+ + + +IQR+KGLGEM P QLW+TT+NPEQR++
Sbjct: 549 LYQVRKGRQKYYTYDDVEQDKLLNEIGRDGC-AIQRYKGLGEMNPEQLWDTTMNPEQRVM 607
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ + DA EA+ +F+ LMG +V+ R++ I+ NA N+ NLD
Sbjct: 608 LKVELTDAVEADRLFTILMGDKVEPRRKFIEDNAKNVSNLD 648
>gi|312142414|ref|YP_003993860.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311903065|gb|ADQ13506.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 640
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/650 (50%), Positives = 450/650 (69%), Gaps = 25/650 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
FKE Y +E IQVLEGLEAVRKRP MYIGST GLHHLVYE++DN++DEA AGY
Sbjct: 3 FKER---SNYEAEHIQVLEGLEAVRKRPGMYIGSTSTEGLHHLVYEVVDNSIDEAMAGYC 59
Query: 128 SNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+ I V + N IP++ HP +K A+E V+T LHAGGKFGG GY VSGG
Sbjct: 60 TEIIVEIQPGNIIKVKDNGRGIPVENHPKIDKPAVEVVMTTLHAGGKFGGE--GYKVSGG 117
Query: 179 LHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
LHGVG+SVVNAL+E +EV + W+DG Y QKY RG P L + DS D GT I F
Sbjct: 118 LHGVGISVVNALTEWMEVEIAWKDGKVYKQKYERGVPQHELRA-IGSCDS-DCTGTTIEF 175
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D Q+F I +++ +A R++ELAFLN L I + DS ++ + +EY + GGL +
Sbjct: 176 KADPQIFE-EIDYEYRNLAQRLKELAFLNKGLKIKII--DSRVDETKEDEYQYDGGLVSF 232
Query: 298 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++LN KKPL+ D + + + ++++A+Q+ Y+ ++ +AN+I T +GGTH+ G
Sbjct: 233 VKYLNQSKKPLYPDPIYLETEGEEGSLEVAIQY-HQGYNSSIFSFANNINTKEGGTHLSG 291
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K+++TRT N +K +KD D + G+ +REG+T IISV++ +P+FEGQTKT+LGN E
Sbjct: 292 FKSAITRTFNDYARKKNILKDSDDNFKGQDIREGMTAIISVKLADPQFEGQTKTKLGNSE 351
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
+R VD +V +L +LE +P + I+ K+LSA +A AA++ARDL R+KS L S++LP
Sbjct: 352 MRGFVDSAVSSFLKTFLEENPKIAKVIVDKALSAARARKAARKARDLTRRKSALTSTALP 411
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADC+ +++E++IVEGDSAGGSAKQGR+R FQAILPL+GKILNVE+ + N
Sbjct: 412 GKLADCAKRQAKDTEVYIVEGDSAGGSAKQGRNREFQAILPLKGKILNVEKSRLNKILNN 471
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+EI+ LI A+G GV E+F LRY +III+TDAD+DGAHIRTLLLTFFYRY + L +
Sbjct: 472 DEIRALITAIGTGV-AEEFDINNLRYERIIIMTDADIDGAHIRTLLLTFFYRYMRPLLEN 530
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPLYKV++G++ +Y Y+D LK++ + + S+QR+KGLGEM P QLW+T
Sbjct: 531 GNIYIAQPPLYKVKKGRKEEYVYNDKALKELLDEIGRDRV-SMQRYKGLGEMNPGQLWDT 589
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
T++P+ R+L Q+ IEDA A+ FS LMG +V+ R++ IQ NAA + NLD
Sbjct: 590 TMDPDNRILLQVNIEDAILADETFSILMGDKVEPRRKFIQENAAQVKNLD 639
>gi|401563979|ref|ZP_10804902.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
gi|400189260|gb|EJO23366.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
Length = 684
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/644 (51%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +EV
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVEV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 VIHGDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS +++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSTMDVEVRRDGEIHAISFARG--VTQEKLHT--IGTCETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L D E+ + + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHFDGGIRSFVAHLNR 282
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLMEYFEENPAVTKRVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY K L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLAKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y DAE +K + +IQR+KGLGEM P QLWETT+NPE
Sbjct: 581 QPPLYQIRKDKKHFYTYSDAEQEKKLDEIGREGV-TIQRYKGLGEMNPEQLWETTMNPEG 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|427406668|ref|ZP_18896873.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
gi|425708098|gb|EKU71139.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
Length = 684
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 332/644 (51%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DNA+DEA AGY N+ V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNAIDEALAGYCDNVAV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHKDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S++V V RDG Y ++RG L V + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGRIYEISFARGNTTEKLR----EVGTSETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEEPRSE--TFHFEGGIRSFVSHLNR 282
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLSVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY + L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLSKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NP +
Sbjct: 581 QPPLYQIRKDKKHFYTYTDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPTE 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + ++ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLRVAAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|21675071|ref|NP_663136.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
gi|21648310|gb|AAM73478.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
Length = 647
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/643 (49%), Positives = 436/643 (67%), Gaps = 27/643 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG+ IQVL+G+E VRKRPAMYIG RGLHHLVYEI+DNA+DE AGY I VA
Sbjct: 13 STEYGATNIQVLDGIEHVRKRPAMYIGDIHSRGLHHLVYEIVDNAIDETLAGYNDYIHVA 72
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG
Sbjct: 73 MNPDGSVTVTDHGRGIPVDIHPVKKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGA 130
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EV V+RDG + Q Y RG P V + + D++GT++ F PD ++F
Sbjct: 131 SVVNALSEWCEVEVYRDGKIFRQTYRRGVP----QGGVEEIGTTDQRGTKVTFKPDPEIF 186
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+F + I R+RELAFLN L I ++ D E N+ + + GGL+E+V++++++
Sbjct: 187 KIT-EFRKDIILDRMRELAFLNSNLRIIVQ----DAEGNE-EIFHYEGGLKEFVRFIDSN 240
Query: 305 K-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ L + + + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTR
Sbjct: 241 RLSLLKEPIFLSGERDSTMVEIALQY-NDSYQENIFSYVNNINTHEGGTHVTGFRKALTR 299
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN+ +K+ +K+ I+L+G+ +EGLT +ISV+VP P+FEGQTKT+LGN E + +V+
Sbjct: 300 TLNAYAQKNDLLKNVKITLTGDDFKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVET 359
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L E+ E +P L I+ K SA + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 360 IVNEQLAEFAESNPGTLKLIIEKVKSAAISREAARKAKELTRRKSVLESSGLPGKLADCS 419
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P+ E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I
Sbjct: 420 INDPDHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTII 479
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG + E+F E LRY KIII+TDADVDGAHIRTLLLTFF+RY ++L + G +++
Sbjct: 480 LALGTSIGEEEFSPEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQ 539
Query: 604 PPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V+ G++ QY +D+ E ++++K A SIQR+KGLGEM P QLW TT++
Sbjct: 540 PPLYLVKSGREQQYAWDEDERLSIVEQMKKLQKGKANVSIQRYKGLGEMNPEQLWSTTMD 599
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
P R L Q+ +E+A EA+ VFS+LMG +V+ R++ I+ A V
Sbjct: 600 PAHRSLLQVTVENAMEADQVFSTLMGDKVEPRRDFIEKNARYV 642
>gi|452992024|emb|CCQ96561.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 637
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 438/640 (68%), Gaps = 20/640 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY +IQVLEGLE VRKRP MYIGST RGLHHLV+EI+DN++DEA GYA I++ +
Sbjct: 7 TYTESEIQVLEGLEPVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEAMNGYADQIDIIVR 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+ +HP T KS +ETVLTVLHAGGKF GY VSGGLHGVGLSV
Sbjct: 67 RDNRVTVIDNGRGIPVGIHPQTGKSTVETVLTVLHAGGKF--GGKGYKVSGGLHGVGLSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE L V ++G Y Q Y RG P L ++ S + GT I F PD ++FT
Sbjct: 125 VNALSEELVAEVKKEGKMYRQTYHRGVPEGPLK--IVGEISPEISGTTITFKPDPEIFTE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+FD++ + RIRELAFLN + + L +D N+ E+ + GG+ E+V +LN ++
Sbjct: 183 TTEFDYDVLQSRIRELAFLNKGIKLTL----TDERTNRREEFHYEGGIAEFVLFLNKNRN 238
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH + +GI +++A+Q+ D +S + +AN+I T +GGTH G K LTR +N
Sbjct: 239 VLHSPIYMHDQREGIDVEIAIQY-HDEFSTNLYSFANNIHTHEGGTHEVGFKTGLTRVIN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K+ +K+ + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN E + + +
Sbjct: 298 DYARKNNLLKENEENLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEAKTITESLFS 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E+ + +L+ +P V I+ K++ A +A AA++AR+L R+K+ L SSLPGKLADCSS
Sbjct: 358 EHFSTFLDENPSVAKKIIEKAVLASRAREAARKARELTRRKNALEVSSLPGKLADCSSRD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + NEEI+ +I AL
Sbjct: 418 ASISELYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNVEKARLDKILSNEEIRAMITAL 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++ RYHKIII+TDADVDGAHIRTLLLTFFYR+ +TL + G IY+ PPL
Sbjct: 478 GTGI-GDELDITKARYHKIIIMTDADVDGAHIRTLLLTFFYRHMRTLVENGFIYIAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y++ +GK+V Y Y ++EL+KVK S IQR+KGLGEM P QLWETT+NP+ R+L
Sbjct: 537 YRISQGKKVLYAYKESELEKVKKSLQGKGEIEIQRYKGLGEMDPEQLWETTMNPKNRILL 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ +EDA EA+ +F +LMG RV+ R++ I + A+ V NLD
Sbjct: 597 RVHLEDAMEADQIFDTLMGDRVEPRRDFIHDHAHYVRNLD 636
>gi|384049352|ref|YP_005497369.1| DNA gyrase subunit B [Bacillus megaterium WSH-002]
gi|345447043|gb|AEN92060.1| DNA gyrase subunit B [Bacillus megaterium WSH-002]
Length = 643
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 443/642 (69%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V +
Sbjct: 12 QAYEADQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCDEINVII 71
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E +LTVLHAGGKFGG S LHGVG S
Sbjct: 72 EKDNSITVKDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGAS 129
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS SLEV V RDG ++QKY RG P L V D+ GT I+F PD ++FT
Sbjct: 130 VVNALSTSLEVHVHRDGKVHYQKYERGVPAADLKV----VGETDKTGTVIQFHPDGEIFT 185
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++D +T+A R+RELAFLN + I + + E+++ EY + GG++ YV+ LN K
Sbjct: 186 ETLEYDFDTLANRLRELAFLNRGIKITI---EDKREEDKRREYHYEGGIKSYVEHLNRSK 242
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H+ + + D I++++A+Q+ +D+Y+ + +AN+I T +GGTH G K +LTR
Sbjct: 243 EVIHEEPIYIEGNRDNISVEIAIQY-NDSYTSNLYSFANNIHTYEGGTHEAGFKTALTRV 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ KD D +L+GE VREG+T IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 302 INDYARKNSVFKDSDANLTGEDVREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDSV 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E+L YL +P V ++ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 362 FAEHLETYLLENPIVAKKVIEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSS 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE+++VEGDSAGGSAKQGR R FQAILPLRGKI+NVE+ + N EI+ +I
Sbjct: 422 KDPSISELYVVEGDSAGGSAKQGRSRHFQAILPLRGKIINVEKARLDKILSNNEIRTIIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G+DF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ P
Sbjct: 482 ALGTGI-GDDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV +GK+V+Y Y+D +L++V +SFP A ++QR+KGLGEM P QLWETT++PE R
Sbjct: 541 PLYKVSQGKKVEYAYNDRQLEEVLASFPEGAKPNLQRYKGLGEMNPEQLWETTMDPEFRT 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 601 LLQVNLQDAIEADETFEILMGDKVEPRRNFIEENAQYVKNLD 642
>gi|373498797|ref|ZP_09589298.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
gi|404367389|ref|ZP_10972756.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|313690309|gb|EFS27144.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|371960408|gb|EHO78066.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
Length = 635
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 325/645 (50%), Positives = 434/645 (67%), Gaps = 23/645 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DNAVDEA AGY I V
Sbjct: 1 MSNNYQAENITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNAVDEALAGYCDKIIV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L DN IP+ +HP NKSALE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 NILPDNIIEVIDNGRGIPVGIHPKYNKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +VTV DG ++QKY+RG P + + D GT +RF D ++
Sbjct: 119 VSVVNALSEWTDVTVKTDGKIWYQKYNRGIPEEDVKEIGVTTD----HGTSVRFKADHEI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T I +D+NT+ R++ELA+LN L I L +P K + E+ F GG+ ++++ +
Sbjct: 175 FETLI-YDYNTLKNRLKELAYLNKGLEIHLSDSRKEPYKKE--EFKFEGGIVDFLKEITE 231
Query: 304 D-KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +K + + + +VD +T+D+A + + ++ + + N+I T +GGTH+ G + +LT
Sbjct: 232 ETEKLIPEPIYMSGEVDNVTVDIAFLYTVNQ-AEVIYSFVNNINTHEGGTHVSGFRTALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +GK +K+KD L G +REG+T I+SV+VP P+FEGQTKT+LGN EV +V
Sbjct: 291 RVINDVGKAQGYLKEKDGKLQGNDIREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVS 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V L LE +P+ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC
Sbjct: 351 TLVGTNLKIVLEDNPNDTKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P+E EI+IVEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +N E++ +
Sbjct: 411 SSKNPDECEIYIVEGDSAGGSAKQGRDRSHQAILPLRGKILNVEKAGLHKSLENNEVRAM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G + G+ F E LRY KII++TDADVDGAHIRTLLLTF YR+ L G +Y+
Sbjct: 471 ITAFGTSI-GDSFNIEKLRYGKIILMTDADVDGAHIRTLLLTFIYRFMVDLIYNGNVYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK+ GKQ++Y Y D ELK++ F + Y++QR+KGLGEM P QLW+TT+NP+
Sbjct: 530 QPPLYKITTGKQIRYAYTDKELKEITDVFEGDDRKYTLQRYKGLGEMNPEQLWDTTMNPD 589
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R L Q+ I+DA A+++F LMG +VD R+E I +NA + NLD
Sbjct: 590 TRTLLQVTIDDARAADMLFDKLMGDKVDPRREFIEENAVYVKNLD 634
>gi|333372855|ref|ZP_08464776.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Desmospora sp. 8437]
gi|332971209|gb|EGK10172.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Desmospora sp. 8437]
Length = 641
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/643 (50%), Positives = 435/643 (67%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y QIQVLEGLEAVRKRP MYIG+T RGLHHLV+E++DN++DEA AG I+V +
Sbjct: 10 KNYDESQIQVLEGLEAVRKRPGMYIGATSSRGLHHLVWEVVDNSIDEALAGRCDTIQVTV 69
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+ + P + A+E V+TVLHAGGKF + GY SGGLHGVG+S
Sbjct: 70 NEDNSVTVEDNGRGIPVGIQPKVGRPAVEVVMTVLHAGGKF--DNEGYKFSGGLHGVGVS 127
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVF 244
VVNALSE LEV V R+G + Q+Y +G P + L V K ++ GTRI F PD ++F
Sbjct: 128 VVNALSEWLEVQVKREGKIHVQRYRKGVPESDLQ-----VTGKTKETGTRITFKPDPEIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T ++D+ + R+RELAFLN L I L E + + NE+ + GG+ +V+ LN +
Sbjct: 183 TETTEYDYEILQNRLRELAFLNQGLRIMLSDERGE---GKSNEFKYDGGIRSFVEHLNKN 239
Query: 305 KKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ LH F + + + + +ALQ+ +D +S + YAN+I T +GGTH G K++LTR
Sbjct: 240 RESLHQPPIFIEGEKEELVVQIALQY-NDGFSSNLYSYANNIHTHEGGTHEAGFKSALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N ++ +K+ D +LSG+ REGLT IIS+++P+P+FEGQTKT+LGN E R V +
Sbjct: 299 VINDYARRHNLLKENDNNLSGDDTREGLTAIISIKIPDPQFEGQTKTKLGNSEARTVTES 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +LE +P V +++K++ A +A AA++AR+L R+K+ L SSLPGKLADC+
Sbjct: 359 IFAEQFLAFLEENPAVSKKVINKAVMAARAREAARKARELTRRKNALEVSSLPGKLADCT 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S E SE+++VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ NEEI+ +
Sbjct: 419 SRKAEISELYLVEGDSAGGTAKQGRDRMFQAILPLRGKILNVEKARLDKALSNEEIRTIT 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ GEDF+ E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+
Sbjct: 479 TALGTGI-GEDFQLEKARYHKIMIMTDADVDGAHIRTLLLTFFYRYMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y +DD E ++ S +QR+KGLGEM QLWETT++PE R
Sbjct: 538 PPLYKITQGKKVLYAFDDREKDRIVSELEDKGKVELQRYKGLGEMTATQLWETTMDPESR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ +EDA +A+ VF +LMG +V+ R+E IQ A V NLD
Sbjct: 598 TLLQVSLEDALDADQVFETLMGEKVEPRREFIQEYAKQVRNLD 640
>gi|255692967|ref|ZP_05416642.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|423301203|ref|ZP_17279227.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
gi|260621278|gb|EEX44149.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|408471804|gb|EKJ90333.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
Length = 652
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 317/652 (48%), Positives = 437/652 (67%), Gaps = 26/652 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY ++IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCTHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+R G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRGGKIYQQEYEIGKPLYS----VKEVGTSDITGTRQQFWPDGS 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L+ YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLSYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ ++EEI
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESEEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + ED KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTEDDSKEANIEKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF--PSNALYSIQRFKGLGEMMPVQL 653
G +Y+ PPLY +GK +YC+ DA+L+ ++ S + IQR+KGLGEM QL
Sbjct: 540 NGYLYIATPPLYLCTKGKVKEYCWTDAQLQNFIDTYGGGSESAVHIQRYKGLGEMNAEQL 599
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
W TT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 600 WSTTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|153809174|ref|ZP_01961842.1| hypothetical protein BACCAC_03484 [Bacteroides caccae ATCC 43185]
gi|423220418|ref|ZP_17206913.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
gi|149128150|gb|EDM19370.1| DNA gyrase, B subunit [Bacteroides caccae ATCC 43185]
gi|392623495|gb|EIY17598.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
Length = 652
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 317/653 (48%), Positives = 440/653 (67%), Gaps = 28/653 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDDT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRITLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L+ YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLSYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++EI
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + ED KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTEDDSKEANIEKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM Q
Sbjct: 540 NGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 LWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|386002763|ref|YP_005921062.1| DNA gyrase subunit B [Methanosaeta harundinacea 6Ac]
gi|357210819|gb|AET65439.1| DNA gyrase, B subunit [Methanosaeta harundinacea 6Ac]
Length = 640
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/644 (50%), Positives = 450/644 (69%), Gaps = 27/644 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V + Y + IQVLEGL+AVR+RPAMYIGST GLHHLVYE++DN++DEA AG S I +
Sbjct: 12 VVEEYDASTIQVLEGLDAVRRRPAMYIGSTNLAGLHHLVYEVVDNSIDEAMAGRCSEINL 71
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
L AD + IP+D+H K ALE V+T LHAGGKF S Y VSGGLHGVG
Sbjct: 72 VLHADGTASVRDDGRGIPVDIHEHYKKPALEIVMTKLHAGGKFDHKS--YKVSGGLHGVG 129
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EV V R+ + Y Q+Y RG+PV+ L H + D GT +RF PD ++
Sbjct: 130 VSVVNALSEWMEVEVRRNNLVYWQRYERGRPVSDLEVHGV----SDHTGTTVRFKPDPEI 185
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F A++F +T+A R+RELAFLN L I++ E + + EY + GG+ +V+ LN
Sbjct: 186 FE-AVEFSFDTLASRLRELAFLNRGLKISVEDERTAKRR----EYLYDGGIVSFVEHLNK 240
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K LH + F ++ DG ++++ALQ+ ++ Y++ +L +AN+I T +GGTH+ G +A+LT
Sbjct: 241 NKDILHSPPIYFNREKDGTSVEVALQY-NNTYNENVLSFANNINTREGGTHLAGFRAALT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T N + +K +KD D L+G+ +REGL +ISVR+ +P+FEGQTKT+LGN V +V
Sbjct: 300 KTTNEYARANKLLKD-DTKLTGDDLREGLVAVISVRLADPQFEGQTKTKLGNSAVGGIVS 358
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L+E+ E +P V I+ K+ A +A +AA++AR+L R+K+ L S LPGKLADC
Sbjct: 359 SLVSEGLSEFFEENPLVTVKIVEKATQAYRARVAARKARELTRRKNALSSGGLPGKLADC 418
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P+ SE++IVEG+SAGGSAKQGR+R FQAILPLRGKILNVER + KN EI+N+
Sbjct: 419 AEKDPQLSELYIVEGESAGGSAKQGRNRHFQAILPLRGKILNVERARLDKILKNNEIRNI 478
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G+ G+DF+ + RY K++I+TDADVDG+HIRTLLLTFFYRY + L + G +Y+
Sbjct: 479 ITALGTGI-GDDFQLDRARYRKVVIMTDADVDGSHIRTLLLTFFYRYMRELVEAGYVYIA 537
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V+RGK Y Y +A+L + A ++QR+KGLGEM P QLWETT++PE+
Sbjct: 538 QPPLYQVKRGKAATYAYSEADLAGILEGSGGKA--TVQRYKGLGEMNPEQLWETTMDPER 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R + ++ +EDA EA+ +FS LMG +V+ R+E I+ +A ++ NLD
Sbjct: 596 RTMLKVTLEDAMEADEIFSILMGEKVEPRREFIEAHARDVRNLD 639
>gi|294496880|ref|YP_003560580.1| DNA gyrase subunit B [Bacillus megaterium QM B1551]
gi|294346817|gb|ADE67146.1| DNA gyrase, B subunit [Bacillus megaterium QM B1551]
Length = 638
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 443/642 (69%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V +
Sbjct: 7 QAYEADQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCDEINVII 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E +LTVLHAGGKFGG S LHGVG S
Sbjct: 67 EKDNSITVKDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS SLEV V RDG ++QKY RG P L V D+ GT I+F PD ++FT
Sbjct: 125 VVNALSTSLEVHVHRDGKVHYQKYERGVPAADLKV----VGETDKTGTVIQFRPDGEIFT 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++D +T+A R+RELAFLN + I + + E+++ EY + GG++ YV+ LN K
Sbjct: 181 ETLEYDFDTLANRLRELAFLNRGIKITI---EDKREEDKRREYHYEGGIKSYVEHLNRSK 237
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H+ + + D I++++A+Q+ +D+Y+ + +AN+I T +GGTH G K +LTR
Sbjct: 238 EVIHEEPIYIEGNRDNISVEIAIQY-NDSYTSNLYSFANNIHTYEGGTHEAGFKTALTRV 296
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ KD D +L+GE VREG+T IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 297 INDYARKNSVFKDSDANLTGEDVREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDSV 356
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E+L YL +P V ++ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 357 FAEHLETYLLENPIVAKKVIEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSS 416
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE+++VEGDSAGGSAKQGR R FQAILPLRGKI+NVE+ + N EI+ +I
Sbjct: 417 KDPSISELYVVEGDSAGGSAKQGRSRHFQAILPLRGKIINVEKARLDKILSNNEIRTIIT 476
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G+DF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ P
Sbjct: 477 ALGTGI-GDDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQP 535
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV +GK+V+Y Y+D +L++V +SFP A ++QR+KGLGEM P QLWETT++PE R
Sbjct: 536 PLYKVSQGKKVEYAYNDRQLEEVLASFPEGAKPNLQRYKGLGEMNPEQLWETTMDPEFRT 595
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 596 LLQVNLQDAIEADETFEILMGDKVEPRRNFIEENAQYVKNLD 637
>gi|347751700|ref|YP_004859265.1| DNA gyrase subunit B [Bacillus coagulans 36D1]
gi|347584218|gb|AEP00485.1| DNA gyrase, B subunit [Bacillus coagulans 36D1]
Length = 641
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 328/643 (51%), Positives = 439/643 (68%), Gaps = 23/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I V +
Sbjct: 9 QSYGAEQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEALAGFCDEINVFI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 69 EKDNSITVKDNGRGIPVGIQEKVGRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L+V V RDG Y+QKY RGKP L + DR GT F PD ++FT
Sbjct: 127 VVNALSTELDVYVHRDGHIYYQKYRRGKPAFDLKI----IGETDRTGTTTHFKPDPEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+FD + + R+RELAFLN + I + K + +P K EY + GG++ YV+ LN
Sbjct: 183 ETTEFDFDILTTRLRELAFLNKGIKITIEDKREKNPRKQ---EYHYEGGIKSYVEHLNRS 239
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ LH + + + DGIT++++LQ+ +D ++ + +AN+I T +GGTH G K +LTR
Sbjct: 240 KEVLHKEPIYVEGEKDGITVEVSLQY-NDGFASNIYSFANNIHTYEGGTHESGFKTALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K+ +K+ + +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN E R + D
Sbjct: 299 VINDYARKNNLIKENEANLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNTEARTITDA 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +++ +P V I+ K L A +A +AAK+AR+L R+KS L S+SLPGKLADC+
Sbjct: 359 VFSETFEKFMMENPQVARKIVEKGLMAARARMAAKKARELTRRKSALESTSLPGKLADCT 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P ESE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SRDPAESELYIVEGDSAGGSAKQGRDRMFQAILPLRGKILNVEKARLDKILSNAEIRTII 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG GV GEDF RYHK++I+TDADVDGAHIRTLLLTFFYRY + L D G IY+
Sbjct: 479 TALGTGV-GEDFDISKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRPLIDAGYIYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKV++GK+V+Y Y D L+++ ++ P+ +IQR+KGLGEM P QLWETT+ P R
Sbjct: 538 PPLYKVQQGKRVEYVYSDRGLEELLNTLPAQPKPAIQRYKGLGEMNPEQLWETTMEPANR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ Q+ ++DA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 598 TMLQVSLDDAIEADGTFEMLMGDKVEPRRNFIEENAIYVKNLD 640
>gi|294849833|ref|ZP_06790573.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
gi|294823381|gb|EFG39810.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
Length = 644
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 335/642 (52%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L VD+ D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVDTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|51891144|ref|YP_073835.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
gi|51854833|dbj|BAD38991.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
Length = 638
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/646 (50%), Positives = 447/646 (69%), Gaps = 26/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y EQIQVLEGLEAVR+RP MYIG T RGLHHL++EI+DNAVDE AG+ I V
Sbjct: 6 TEQYTGEQIQVLEGLEAVRRRPGMYIGGTSQRGLHHLIWEIIDNAVDERLAGFCDKIVVT 65
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L +D S IP+D+HP T S +ETV T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 66 LHSDGSVSVSDNGRGIPVDIHPKTGISTVETVYTMLHAGGKFGGGA--YKVSGGLHGVGA 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
+VVNALS L + V ++G Y +++ G TL D+K+ GT +RFWPD ++F
Sbjct: 124 AVVNALSRKLYIQVKQNGGVYEVEFANGGK--TLYPLRRVGDTKE-HGTYVRFWPDPEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE-KNQYNEYFFAGGLEEYVQWLNT 303
+ ++FD I R+R+ AFLN L I E + E + +YNE GL+ +VQ+LN
Sbjct: 181 ES-VEFDSEAIVTRLRDTAFLNQGLFIQFIDEKAGAEYRFKYNE-----GLQTFVQYLNR 234
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
++PLH + K D ++LA+Q+ +DAYS+ +L +AN+IRT++GGTH G+K +LT
Sbjct: 235 SREPLHAKPIYVFKATDTQEMELAIQY-TDAYSENILSFANNIRTVEGGTHETGLKTALT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +NS +K K +KD + +LSGE +REG+T I+SV++ P+FEGQTKT+LG+ E+ V
Sbjct: 294 RVINSYARKYKLLKDNEDNLSGEDIREGMTAILSVKLQEPQFEGQTKTKLGSSEMETFVA 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+V E L+++LE +P + I+ K+LSA +A AA++AR+LVR+KS L ++LPGKL DC
Sbjct: 354 AAVSEGLSDFLEENPAIAKRIVEKALSAARAREAARKARELVRRKSALEITALPGKLTDC 413
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+S P ESE+F+VEGDSAGGSAK GRDRR QA+LPLRGKILNVE+ + NEEI+ L
Sbjct: 414 TSRDPSESELFLVEGDSAGGSAKMGRDRRIQAVLPLRGKILNVEKARLDKILSNEEIRTL 473
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ G+DF RYHK+II+TDADVDG+HIRTLLLTFF+R+ + L + G +Y+
Sbjct: 474 ITAVGAGI-GDDFDISKCRYHKVIIMTDADVDGSHIRTLLLTFFFRFMRPLIEAGYLYIA 532
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY + +GKQV Y Y + E +V + QR+KGLGEM P QLWETT++P +
Sbjct: 533 SPPLYMIRKGKQVYYAYSEQEKDQVIARI-GGVTDKPQRYKGLGEMNPEQLWETTMDPSK 591
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLDHL 707
R+L ++ +EDAAEA +F +LMG +V+ R+E IQ A+LV NLD +
Sbjct: 592 RILYKVTMEDAAEATALFETLMGEKVEPRREFIQRNAHLVQNLDTI 637
>gi|298372284|ref|ZP_06982274.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
gi|298275188|gb|EFI16739.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
Length = 653
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/651 (48%), Positives = 435/651 (66%), Gaps = 26/651 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++K YG+ IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY NI V
Sbjct: 10 LNKEYGASSIQVLEGLEAVRKRPAMYIGDVGEKGLHHLVYEVVDNSIDEALAGYCKNISV 69
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNS IP+D+H KSALE V+TVLHAGGKF S Y VSGGLHGVG
Sbjct: 70 TINKDNSVTVKDDGRGIPVDIHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVG 127
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+S VNALS+ L+ V R+G Y Q+YSRG P+ V V + GT I F PDK +
Sbjct: 128 VSCVNALSDYLKAEVCRNGKRYVQEYSRGVPLG----EVKEVGTSSETGTTITFHPDKDI 183
Query: 244 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
F I + ++ + R+RELAFLN +LTI + + + N+ E++ GL E+V+++
Sbjct: 184 FID-IHYKYSILVKRMRELAFLNAGIRLTITDLRSEEEGGANKTEEFYSEQGLREFVKYI 242
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
++ ++PL +DV+ D G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +
Sbjct: 243 DSTREPLINDVIYIDTDKYGTPVEVAMMYNT-SYTENLHSYVNNINTIEGGTHVTGFRTA 301
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTRTL +K ++ + +S + REG+T +ISV+V P+FEGQTKT+LGN EV+ +
Sbjct: 302 LTRTLKKYADDNKLLEKTKVEISSDDFREGITAVISVKVAEPQFEGQTKTKLGNDEVKGM 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD++V E L +LE HP +I+ K + A A AA++AR+LV++KS L LPGKLA
Sbjct: 362 VDRAVGEALNVFLEEHPKEAKTIVEKIILAATARNAARKARELVQRKSPLSGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS EIF+VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ +++EE++
Sbjct: 422 DCSSRDASLCEIFLVEGDSAGGSAKQGRDRNFQAILPLRGKILNVEKAMRHKAFESEEVR 481
Query: 541 NLIRALGLGVKGED----FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
N+ ALG+ + E+ E LRYHK++I+TDADVDG+HI TL+LTFF+RY K L ++
Sbjct: 482 NIYTALGVTIGTEEDSQALNIEKLRYHKVVIMTDADVDGSHIATLILTFFFRYMKELIEQ 541
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLW 654
G +Y+ PPLY ++GK +YC+ + + + + I QR+KGLGEM P QLW
Sbjct: 542 GHVYIATPPLYLCKKGKVQEYCWTEEQRLRFIQQYGDGKESGITQQRYKGLGEMNPEQLW 601
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
ETT+NPE R L+Q+ IE+AAEA+ VFS LMG V R++ I+ A N+D
Sbjct: 602 ETTMNPENRTLRQITIENAAEADYVFSMLMGDDVAPRRQFIEENATYANID 652
>gi|224536623|ref|ZP_03677162.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223514|ref|ZP_17209983.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
gi|224521714|gb|EEF90819.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638394|gb|EIY32235.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
Length = 653
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 314/655 (47%), Positives = 442/655 (67%), Gaps = 29/655 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + +Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +I
Sbjct: 7 NSNNGSYSAENIQVLEGLEAVRKRPAMYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHI 66
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHG
Sbjct: 67 EVTINEDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHG 124
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+S VNALS + V+R+G Y Q+Y G P+ V + + D GTR +FWPD
Sbjct: 125 VGVSCVNALSTHMTTQVFRNGKIYQQEYECGHPLYP----VKEIGTSDITGTRQQFWPDN 180
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQ 299
+FT + +++ +A R+RELA+LN + I L D E N E F++ GL+E+V+
Sbjct: 181 TIFTETV-YNYEILATRMRELAYLNAGIKITLTDLRVKDEENNAKMEVFYSEEGLKEFVR 239
Query: 300 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++++ ++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G +
Sbjct: 240 YIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFR 298
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRTL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 RALTRTLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVM 358
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
VDQ+V E L YLE HP ++ K + A +A +AA++AR+ V++KS + +PGK
Sbjct: 359 GAVDQAVGEALNYYLEEHPKEAKMVVDKVILAAQARVAARKARESVQRKSPMSGGGMPGK 418
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS PEE E+F+VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++++E
Sbjct: 419 LADCSSKDPEECELFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAMWHKAFESDE 478
Query: 539 IQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
+ N+I+ALG+ GV GED K+ + LRY K+II+TDADVDG+HI TL++T F+RY +
Sbjct: 479 VNNIIQALGIRFGVDGEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQV 538
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMP 650
G +Y+ PPLY ++GK +YC+ D + +K ++ NA+++ QR+KGLGEM P
Sbjct: 539 IRNGYLYIATPPLYLCKKGKVEEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNP 597
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW TT+NPE RMLKQ+ IE+AAE + +FS LMG V R++ I+ A N+D
Sbjct: 598 EQLWSTTMNPENRMLKQISIENAAEVDYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|406671602|ref|ZP_11078841.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
gi|405580852|gb|EKB54911.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
Length = 639
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 320/640 (50%), Positives = 429/640 (67%), Gaps = 22/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DNA+DEA AGY ++IEV +
Sbjct: 10 YNADQIQVLEGLEAVRKRPGMYIGSTSEEGLHHLVWEIVDNAIDEALAGYCNHIEVTIEK 69
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+NSI P+D+ T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG SVV
Sbjct: 70 NNSITVTDNGRGIPVDIQHKTGRPAVETVYTVLHAGGKFGGGS--YKVSGGLHGVGASVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L V V R G Y ++ RG +T + + + GTR+ F PD +FT
Sbjct: 128 NALSSQLSVEVSRSGKVYRIEFERG----NITSELKVIGDHEETGTRVNFVPDPTIFTET 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++ N + RIRELAFLN L I L + D EK YF+ GG++ YV +LN DK+
Sbjct: 184 TEYRFNILNERIRELAFLNKNLRITLVDKREDREKEV--SYFYEGGIKSYVSYLNEDKEV 241
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + + +++GIT+++ALQ+ + AY + +AN+I T +GGTH G K SLTR +N
Sbjct: 242 LFSEPIYLEGELEGITVEIALQYTT-AYETIINSFANNIHTHEGGTHESGFKTSLTRVIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++ +K+ + +L+GE REGL I+S++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 301 DYARRANLIKESESNLTGEDTREGLVAIVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFS 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ +L +P + +I+ K + A KA AAKRAR++ R+KS L ++LPGKLADCSS
Sbjct: 361 SHFETFLLENPKIARTIVDKGILASKARHAAKRAREITRKKSGLEIANLPGKLADCSSKD 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
E+ E+FIVEGDSAGGSAKQGR R +QAILP+RGKILNVE+ + N EI++L A+
Sbjct: 421 AEKCELFIVEGDSAGGSAKQGRSRLYQAILPIRGKILNVEKASMDRILNNMEIRSLFTAM 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF E RYHK+II+TDADVDGAHIRTLLLT +RY + L + G +Y+ +PPL
Sbjct: 481 GTGF-GADFDVEKARYHKLIIMTDADVDGAHIRTLLLTLVFRYMRPLLEAGYVYIALPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK++ GK+ Y D +L + + P + +S+QR+KGLGEM QLWETT+NP R ++
Sbjct: 540 YKLKVGKKEFYLDTDEQLDQWQKENP-DVRFSLQRYKGLGEMNAEQLWETTMNPANRRMQ 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ ++DA EAN V + LMG V R+E I QNA + NLD
Sbjct: 599 KVKMKDADEANRVMNMLMGEEVQPRREFIEQNAVYVRNLD 638
>gi|78707355|gb|ABB46483.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 319/633 (50%), Positives = 421/633 (66%), Gaps = 24/633 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL- 135
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 5 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 64
Query: 136 ------ADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 65 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 122
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
N LSE V + +DG Y QKY RG P L + D+ GT I F D +FT
Sbjct: 123 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKIK----GNTDKTGTIISFQADPLIFTET 178
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +++ T+ RI++LAFLN L + L D E+++ + + GG+ EYV++LN K
Sbjct: 179 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEESKIESFHYEGGITEYVKFLNQSKSK 236
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 237 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 295
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 296 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 353
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 354 EAIERFLMENPTQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 413
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEI+IVEGDSAGGSAKQGRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+
Sbjct: 414 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAM 473
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ E F RYHKI+I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPL
Sbjct: 474 GTGISDE-FDITKARYHKIVIMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPL 532
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ G+ QY Y++ EL ++ + + SIQR+KGLGEM QLW+TT++P +R L
Sbjct: 533 YKISWGRNFQYAYNEQELNEILKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLL 590
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
Q+ +EDA EA+ VFS LMG V+ RKE IQN A
Sbjct: 591 QIKLEDAIEADQVFSMLMGEEVEPRKEFIQNNA 623
>gi|295702247|ref|YP_003595322.1| DNA gyrase subunit B [Bacillus megaterium DSM 319]
gi|294799906|gb|ADF36972.1| DNA gyrase, B subunit [Bacillus megaterium DSM 319]
Length = 638
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 443/642 (69%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V +
Sbjct: 7 QAYEADQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCDEINVII 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ + + A+E +LTVLHAGGKFGG S LHGVG S
Sbjct: 67 EKDNSITVKDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS SLEV V RDG ++QKY RG P L V D+ GT I+F PD ++FT
Sbjct: 125 VVNALSTSLEVYVHRDGKVHYQKYERGVPAADLKV----VGETDKTGTVIQFHPDGEIFT 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++D +T+A R+RELAFLN + I + + E+++ EY + GG++ YV+ LN K
Sbjct: 181 ETLEYDFDTLANRLRELAFLNRGIKITI---EDKREEDKRREYHYEGGIKSYVEHLNRAK 237
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H+ + + D I++++A+Q+ +D+Y+ + +AN+I T +GGTH G K +LTR
Sbjct: 238 EVIHEEPIYIEGNRDNISVEIAIQY-NDSYTSNLYSFANNIHTYEGGTHEAGFKTALTRV 296
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ KD D +L+GE VREG+T IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 297 INDYARKNSVFKDSDANLTGEDVREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDSV 356
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E+L YL +P V ++ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 357 FAEHLETYLLENPIVAKKVIEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSS 416
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE+++VEGDSAGGSAKQGR R FQAILPLRGKI+NVE+ + N EI+ +I
Sbjct: 417 KDPSISELYVVEGDSAGGSAKQGRSRHFQAILPLRGKIINVEKARLDKILSNNEIRTIIT 476
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ G+DF RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ P
Sbjct: 477 ALGTGI-GDDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQP 535
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV +GK+V+Y Y+D +L++V +SFP A ++QR+KGLGEM P QLWETT++PE R
Sbjct: 536 PLYKVSQGKKVEYAYNDRQLEEVLASFPEGAKPNLQRYKGLGEMNPEQLWETTMDPEFRT 595
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ I +NA + NLD
Sbjct: 596 LLQVNLQDAIEADETFEILMGDKVEPRRNFIEENAQYVKNLD 637
>gi|440782434|ref|ZP_20960451.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
gi|440219958|gb|ELP59167.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
Length = 636
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 321/645 (49%), Positives = 443/645 (68%), Gaps = 31/645 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y QIQVLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ NI V +
Sbjct: 7 NYDESQIQVLEGLEAVRKRPGMYIGSTSLKGLHHLVYEIVDNSIDEALAGFCKNINVVIH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS+ P+ +H NK +E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 67 KDNSVSVTDDGRGMPVGIHHKMNKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE+ EV V R+G + Q Y RG + + + GT+I F PD ++F
Sbjct: 125 VNALSETCEVIVKREGHIWRQMYHRGNVASPFE----KIGDTEEHGTKINFKPDPEIFDE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I+F+++T+A R+RELAFLN + I E D ++ + + GG++ +V +LN +K+
Sbjct: 181 -IEFNYDTLAQRLRELAFLNKGIKINFVDERQDKKE----VFHYEGGIKSFVSYLNRNKE 235
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
P+ + G++ + +++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LT
Sbjct: 236 PIFPEPIYIEGYKNEY---MVEIALQY-NDGYAENLFSFANNIDTVEGGTHLSGFKTALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN +K +K+ D + SGE +REGLT ++SV++P+P+FEGQTKT+LGN EVR +VD
Sbjct: 292 RVLNDYARKFNFIKENDKNFSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNSEVRGIVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E ++ +LE +P + I+ K++ A +A AAK+AR+L R+KSVL +++LPGKLADC
Sbjct: 352 SILGENVSAFLEENPQIAKIIIDKAMLASRARDAAKKARELTRRKSVLETTALPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P E EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE++ + +E I+ +
Sbjct: 412 SSKDPAECEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKIMNVEKQRIDKILNSEMIRAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ +DF E +RYH+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+
Sbjct: 472 ITAFGAGI-SKDFNIEKIRYHRIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVYIA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYKV +GK+ YCY + EL K + SIQR+KGLGEM QLWETT++PE
Sbjct: 531 QPPLYKVSKGKKEIYCYLEEELDKALEELGGKDNNTSIQRYKGLGEMNAEQLWETTMDPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+R+L + +EDA A+ +F+ LMG +V+ R+E I QNA N+VNLD
Sbjct: 591 RRILLKATVEDAMAADEIFTILMGDKVEPRREFIQQNAKNVVNLD 635
>gi|435852819|ref|YP_007314138.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433669230|gb|AGB40045.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 634
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 451/641 (70%), Gaps = 24/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL- 134
Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLVYE++DN++DEA AGY +E+ +
Sbjct: 6 NYDADQIQVLEGLEAVRKRPGMYIGSTEKKGLHHLVYEVIDNSIDEALAGYCDEVEIKIE 65
Query: 135 ------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+ DN IP+ H ++ A+E V+TVLHAGGKF G GY VSGGLHGVG+SV
Sbjct: 66 PGEIITVRDNGRGIPVASHAKLDRPAVEVVMTVLHAGGKFEGE--GYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V R+G Y+QKY RG P L + + + GT IRF D+++F +
Sbjct: 124 VNALSEWLEVRVHRNGKIYYQKYHRGVPDNDLEV----IGNTEETGTEIRFKADEEIFES 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++++++T++ R +ELA+LN ++ I + E D ++ E+ + GG+ +V+ +N
Sbjct: 180 -VRYNYDTLSQRFKELAYLNKEVKIKILDEREDLIED---EFKYDGGIISFVEEINEHNT 235
Query: 307 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
P+H DV+ F + +D +++A+Q+ +D Y+D + +AN+I T +GGTH+ G K++LTRT+
Sbjct: 236 PIHEDVIFFEEQIDNTEVEVAIQYNTD-YADKIFTFANNINTHEGGTHLSGFKSALTRTI 294
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +++ +KD D +LSG+ +REG+ II+VR+ +P+FEGQTKT+LGN E+R +VD V
Sbjct: 295 NDYARQNDFLKDDDNNLSGDDIREGIVAIINVRLTDPQFEGQTKTKLGNSEIRGMVDSIV 354
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L+ L +P + I+ KS++A +A AAK+AR+L ++K+ L S++LPGKLADCSS
Sbjct: 355 SKGLSTILSENPKLGKQIVKKSIAAAQARKAAKKARELTKRKNALVSTALPGKLADCSSR 414
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EESEI+IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ + N+EI++LI A
Sbjct: 415 NAEESEIYIVEGDSAGGSAKQGRDREFQAILPLKGKILNVEKARLDRVLSNKEIKSLITA 474
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ ++F LRY KIII+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ PP
Sbjct: 475 LGTGI-ADEFDMNNLRYRKIIIMTDADVDGAHIRTLLLTFFYRYMRPLLEEGLVYIAQPP 533
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYKV++G++ +Y Y D +L+ + SIQR+KGLGEM P+QLW+TT++PE R L
Sbjct: 534 LYKVKKGRREEYVYKDRQLQDLLEEIGKKRT-SIQRYKGLGEMNPIQLWKTTMDPENRTL 592
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ I D A+ VF+ LMG +V R+E IQ A V NLD
Sbjct: 593 LQVQISDEVIADDVFTKLMGDKVKPRREFIQRHAKEVQNLD 633
>gi|357039045|ref|ZP_09100840.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
gi|355358509|gb|EHG06275.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
Length = 633
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/639 (52%), Positives = 437/639 (68%), Gaps = 24/639 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+E+IQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY I++ +
Sbjct: 8 YGAEEIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEAMAGYCDKIDIIIHH 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN+ IP+ +HP A+E VLT LHAGGKFGG S LHGVG+SVV
Sbjct: 68 DNTVTVVDNGRGIPVGIHPKMGLPAVEVVLTKLHAGGKFGGGGYKVSGG--LHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG YHQ++ RG VT+L + GT++ F PD ++F
Sbjct: 126 NALSEWLEVEVRRDGFIYHQRFERGVSVTSLKT----IGKAKNTGTKVTFKPDPEIFE-E 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++F +T+ R+REL+FL + I E ++ Q Y +GG+ ++V +LN +K
Sbjct: 181 LEFSQDTLVQRLRELSFLTKGVKITFIDERTE----QQCVYQHSGGIRDFVLYLNKNKSV 236
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
H V F D I +++A Q+ +D + + + Y N+I TIDGGTH G + +LTR +N
Sbjct: 237 QHKPVYFEDTKDQIMVEVAFQY-TDGFVENLFSYVNNIHTIDGGTHETGFRTALTRVIND 295
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
GKK +K+ SL GE +REGLT IISV+VP P+FEGQTKT+LGN EVR +VD V +
Sbjct: 296 YGKKYNILKNGSSSLLGEDIREGLTSIISVKVPEPQFEGQTKTKLGNSEVRGIVDAVVSD 355
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
YL+ +LE +P V IL KS++A +A AA++AR+L R+K+ L SS+LPGKLADCS P
Sbjct: 356 YLSTFLEENPSVARKILEKSINASRAREAARKARELTRRKTALESSTLPGKLADCSERDP 415
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
SE+FIVEGDSAGGSAKQGRDRR+QAILPLRGKILNVE+ + NEEI+ LI ALG
Sbjct: 416 SLSELFIVEGDSAGGSAKQGRDRRYQAILPLRGKILNVEKSRLDKILSNEEIRALITALG 475
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
G+ G+DF E RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G Y+ PPLY
Sbjct: 476 TGI-GDDFNIEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRQLIENGYAYIAQPPLY 534
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
+V + K+ Y Y+D EL+++ + + + S+QR+KGLGEM P QLW+TT+N + R + Q
Sbjct: 535 RVRKEKKEYYVYNDKELEQLLNRVGRDRI-SLQRYKGLGEMNPEQLWDTTMNFDTRTILQ 593
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ +EDA EAN +FS LMG +V+ R+ IQN A V NLD
Sbjct: 594 VQLEDAIEANQIFSMLMGDKVEPRRVFIQNNARAVRNLD 632
>gi|403385778|ref|ZP_10927835.1| DNA gyrase subunit B [Kurthia sp. JC30]
Length = 639
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 320/644 (49%), Positives = 435/644 (67%), Gaps = 22/644 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV+ Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA++I
Sbjct: 7 PVA--YDADQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYATDIV 64
Query: 132 VALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
VA+ DN IP+D K A+E ++TVLHAGGKFGG S LHGV
Sbjct: 65 VAIEKDNWIRVEDNGRGIPVDTQEKVGKPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGV 122
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G SVVNALS V V RDG + K+ RGK V L + D GT RF D +
Sbjct: 123 GASVVNALSTETIVQVHRDGHIHEIKFERGKTVQPLKV----IGDTDHNGTTTRFKADPE 178
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F ++ + +A R+RELA+LN + I++ E E+ N+Y + GG++ YV+ +N
Sbjct: 179 IFKETTVYEFDILAHRVRELAYLNRGIRISIIDEREGQERR--NDYHYEGGIKSYVEHMN 236
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+P+H+ + + + DGI+I++A+Q+ + ++ + +AN+I T +GGTH G K +LT
Sbjct: 237 EKKEPIHEAIDLKGEKDGISIEIAMQYNA-GFASNIFSFANNINTYEGGTHESGFKTALT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +KS +K D +LSGE VREGL I+S++ P+P+FEGQTKT+LGN EV + +
Sbjct: 296 RVINDYARKSNLLKAADANLSGEDVREGLIAIVSIKHPDPQFEGQTKTKLGNSEVSAITN 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E+ +L +P V +I+ K L A +A +AAK+AR++ R+KS L SSLPGKLADC
Sbjct: 356 SLFSEHFERFLLENPSVARTIVDKGLIASRARVAAKKAREMTRRKSALEVSSLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE E++IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N EI+ +
Sbjct: 416 SSRHPEECEMYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAM 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ GEDF E RYHK++I+TDADVDGAHIRTLLLTFF+R+ + L + G IYV
Sbjct: 476 ITAIGTGI-GEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFFRFMRPLIEAGYIYVA 534
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V++GK V+YCY DAEL+++ P +QR+KGLGEM QLW+TT++PE
Sbjct: 535 QPPLYQVKQGKHVEYCYSDAELQEIVGRLPQQPKPMVQRYKGLGEMNADQLWDTTMDPEH 594
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L Q+ ++DA EA+ F LMG V+ R++ I +NA + NLD
Sbjct: 595 RVLLQVELDDALEADRAFEDLMGDDVEPRRQFIHENAVYVENLD 638
>gi|194332868|ref|YP_002014728.1| DNA gyrase subunit B [Prosthecochloris aestuarii DSM 271]
gi|194310686|gb|ACF45081.1| DNA gyrase, B subunit [Prosthecochloris aestuarii DSM 271]
Length = 644
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/643 (48%), Positives = 432/643 (67%), Gaps = 27/643 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S +Y + IQ+L+G+E VRKRPAMYIG RGLHHL+YEI+DN++DE AGY IE++
Sbjct: 10 SSSYLATNIQILDGIEHVRKRPAMYIGDINVRGLHHLIYEIVDNSIDETLAGYNDTIEMS 69
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L D S IP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG
Sbjct: 70 LNDDGSVTVSDNGRGIPVDMHPQKKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGA 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EV V RDG ++Q+Y RG P C V + D+ GT+ F PD +F
Sbjct: 128 SVVNALSEWCEVEVSRDGKVWYQRYHRGVP----QCEVKIIGETDKTGTKTTFMPDASIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F + I R+RELAFLN L I ++ D E + + GG++E+V + + +
Sbjct: 184 KTT-EFRKDVIIDRMRELAFLNSVLKIVVKDTDDSEET-----FHYEGGIKEFVTYTDHN 237
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ L + V + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTR
Sbjct: 238 RIALVKEPVYLYGERDTTVVEIALQY-NDSYQENVFSYVNNINTHEGGTHMTGFRKALTR 296
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN+ +K+ +K+ +SL+G+ +EGLT IISV+V P+FEGQTKT+LGN E + +V+
Sbjct: 297 TLNAYAQKNDLLKNLKLSLTGDDFKEGLTAIISVKVAEPQFEGQTKTKLGNSETQSIVES 356
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L E+LE +P+VL +I+ K SA + AA++A++L R+KSVL S+ LPGKLADCS
Sbjct: 357 IVNEQLAEFLESNPNVLKTIIEKVKSAALSRDAARKAKELTRRKSVLESTGLPGKLADCS 416
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I
Sbjct: 417 INDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTII 476
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG ++F + LRY KIII+TDADVDGAHIRTLLLTFF+R+ + L + G +++
Sbjct: 477 LALGTNFGEDEFMADKLRYGKIIIMTDADVDGAHIRTLLLTFFFRHMRPLIEAGKVFIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY ++ GK+ +Y +D+ E ++ +K S +IQR+KGLGEM P QLW TT++
Sbjct: 537 PPLYLIKAGKEQKYAWDEDERTTIMEMMKKSQKGKTNINIQRYKGLGEMNPEQLWSTTMD 596
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
PE R L Q+ +E+A EA+ VFS+LMG +VD R+E I+ A V
Sbjct: 597 PEHRSLLQVTVENAMEADQVFSTLMGDKVDPRREFIEKNARYV 639
>gi|342218811|ref|ZP_08711414.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
gi|341588758|gb|EGS32133.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
Length = 640
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 335/643 (52%), Positives = 447/643 (69%), Gaps = 22/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN+VDEA AGY ++IEV +
Sbjct: 7 KNYGAEQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEVVDNSVDEALAGYCTHIEVNI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
ADNSI P+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+S
Sbjct: 67 EADNSIIVKDNGRGIPVAMH-KIGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGIS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE ++ V RDG + ++RG T+L P+ + GT + F PD ++F
Sbjct: 124 VVNALSEWTKIKVKRDGYLWDISFARGITNTSL-VQERPLLDNEETGTEVHFKPDPEIFP 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I +D +T+ R+RELAFLN L I L ED K++ EY + GGL +V++LNT+K
Sbjct: 183 D-IVYDFDTLKTRLRELAFLNKGLHITL--EDKRI-KDKKEEYCYKGGLVSFVEFLNTNK 238
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H VV F + + +D+A+Q+ + YS+ +L + N I T +GGTH+ G + +LTR
Sbjct: 239 ENVHPTVVHFEGQKNQVIVDIAMQYNT-GYSENILTFVNDIFTEEGGTHLSGFRTALTRL 297
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N + +K+ + +LSGE VREGLT I+SV+V P+FEGQTKT+LGN EV+ VVD
Sbjct: 298 INDYARNMGILKENEENLSGEDVREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGVVDTI 357
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ L E+ E HP +I++K++SA +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 358 FSDGLREFFEEHPVEAKNIINKTISASRARQAARRARELTRRKNALEISSLPGKLADCSE 417
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+EI++VEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE+ + NEEI+++I
Sbjct: 418 KNSAYTEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKIINVEKARLDKILANEEIRSMIT 477
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ GE+F RY KIII+TDADVDG+HIRTLLLTFFYR+ K L EG +Y+ P
Sbjct: 478 AFGTGI-GEEFDISKRRYDKIIIMTDADVDGSHIRTLLLTFFYRFMKPLITEGHVYIAQP 536
Query: 605 PLYKVERGKQVQYCYDDAEL-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V +GKQV Y Y D E+ +K+ +QR+KGLGEM P QLWETT++P+ R
Sbjct: 537 PLYQVRKGKQVWYFYTDEEMNEKLDELGRDTNNIVVQRYKGLGEMNPEQLWETTMDPQYR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ ++ +EDA +A+ +FS LMG +V+ R++ IQ NA N+ NLD
Sbjct: 597 TMLKVELEDAIKADRIFSVLMGDKVEPRRQFIQENAKNVRNLD 639
>gi|188584649|ref|YP_001916194.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349336|gb|ACB83606.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 640
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 310/642 (48%), Positives = 442/642 (68%), Gaps = 23/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY +I + L
Sbjct: 10 QNYDESQIQVLEGLEAVRKRPGMYIGSTDERGLHHLVHEVVDNSIDEAMAGYCDDIRIKL 69
Query: 135 -------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+ DN IP+ HP K LE ++T LHAGGKF S+ Y VSGGLHGVG+S
Sbjct: 70 EPGNKVRVTDNGRGIPVKDHPKIKKPTLEVIMTYLHAGGKF--SNDSYKVSGGLHGVGIS 127
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVN LS+ + V V+RDG Y Q+Y +G P T + + D++GT I F PD+++F
Sbjct: 128 VVNGLSKWIRVKVYRDGKVYQQEYEKGYPKTEIK----EIGESDKRGTEIIFLPDEEIFE 183
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T ++FD+ + R+++LAFLN ++I + E D K ++ + + GG++ +V++LN +K
Sbjct: 184 T-VEFDYQVLRNRLQQLAFLNRGVSITISDEREDEFKEEH--FKYEGGIKSFVEYLNENK 240
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L V + +G +++A+Q+ +D Y + + YAN+I T +GGTH G K SLTRT
Sbjct: 241 TTLFTPPVYIEGEQEGCKLEVAIQY-NDGYQEMIHSYANNINTHEGGTHESGFKISLTRT 299
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ +K+ D +L+GE +REG+T IISV+V +P+FEGQTKT+LGN EVR++V+
Sbjct: 300 VNDYARRHNLLKNGDKNLTGEDIREGITAIISVKVEDPQFEGQTKTKLGNSEVRRIVEGI 359
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E+L YLE +P V I++K+++A +A AA++A++L R+K+ L ++LPGKLADC++
Sbjct: 360 VSEHLESYLEENPAVGKKIVNKAINASRAREAARKAKELTRRKNALEVTALPGKLADCTT 419
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 420 KDASKSELYLVEGDSAGGSAKQGRDREFQAILPLRGKILNVEKARFDKILANEEIKTIIT 479
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ GE+F RY +III+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ P
Sbjct: 480 AIGTGI-GEEFDISKARYQRIIIMTDADVDGAHIRTLLLTFFYRYMRPLIEHGYVYIAQP 538
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY V++ + Y ++D EL + + S+QR+KGLGEM P QLWETT+NPE R
Sbjct: 539 PLYMVKKKGKHYYTFNDHELDNLLEEIGKEGI-SLQRYKGLGEMNPTQLWETTMNPESRT 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ + ++DA EA+ +F+ LMG +V R++ I +NA ++ NLD
Sbjct: 598 VLNVNLQDAIEADKIFTVLMGEKVSPRRKFIEENARDVRNLD 639
>gi|108802861|ref|YP_642798.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
gi|108764104|gb|ABG02986.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
Length = 644
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 313/640 (48%), Positives = 437/640 (68%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAV++RP MYIGSTGPRGLHHLV+EI+DN++DEA AGY + I V +
Sbjct: 14 YDASSIQVLEGLEAVKRRPGMYIGSTGPRGLHHLVWEIVDNSIDEALAGYCTEISVTVHP 73
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS+ P+ + KSA E ++T LHAGGKF G + Y VSGGLHGVG SVV
Sbjct: 74 DNSVTVSDDGRGMPVGVMEKYGKSAAEVIMTTLHAGGKFDGQT--YKVSGGLHGVGASVV 131
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE+ + RDG + Q+Y RG PVT L + ++ GT +RF PD Q+F T
Sbjct: 132 NALSEWLELEIRRDGHLWTQRYERGFPVTGLE-RGRKLGKREGTGTTVRFRPDPQIFET- 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++F +T++ R RE AFLN L I L E E+ + Y + GG++++V +N K P
Sbjct: 190 VEFSFDTLSRRFRESAFLNKGLRIRLADER---EEGREVVYRYEGGIKDFVAHINEAKDP 246
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H ++ F ++ + +++A+QW S Y D++ +AN+I T +GGTH+ G +A+LTRT+N
Sbjct: 247 VHKTILYFHREEEAGDVEVAMQWNS-GYQDSVFTFANNINTHEGGTHLSGFRAALTRTIN 305
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ +K+K+ +L+G+ +REGL +ISV++ P+FEGQTKT+LGN E++ +V+ +
Sbjct: 306 EYARQKGLLKEKEENLTGDDIREGLAAVISVKLREPQFEGQTKTKLGNTEIKGLVESATN 365
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+L E+LE +P +I++K+++A +A LAA +AR +R K L SS+LPGKLADCSS
Sbjct: 366 RHLAEFLEENPGQARAIVTKAINASRARLAASKARKAIR-KGYLESSTLPGKLADCSSKD 424
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + + N EIQ +I A+
Sbjct: 425 PARSELYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNVEKANINKVLSNAEIQAMISAI 484
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV G+ F E RYHKI+I+TDADVDG+HIRTL+LTF YR L + G +Y+ PPL
Sbjct: 485 GAGV-GDSFNIEEARYHKIVIMTDADVDGSHIRTLVLTFLYRNMPELIEAGYVYIAQPPL 543
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ ++ Y Y DAEL++ ++ ++ RFKGLGEM P QLWETT++P R L
Sbjct: 544 YKITHNRRDVYVYSDAELQETLRRLRADGSATVSRFKGLGEMNPQQLWETTMDPANRTLL 603
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ I+ AA A+ +F++LMG +V+ RK I+ NA N+D
Sbjct: 604 QVTIDSAATADELFTALMGDKVEPRKAFIEANAREAKNID 643
>gi|78707357|gb|ABB46484.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 321/640 (50%), Positives = 424/640 (66%), Gaps = 25/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL- 135
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 5 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 64
Query: 136 ------ADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 65 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 122
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 123 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 178
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 179 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 236
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 237 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 295
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 296 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 353
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 354 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 413
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEI+IVEGDSAGGSAKQGRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+
Sbjct: 414 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAM 473
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ E F RYHKI+I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPL
Sbjct: 474 GTGISDE-FDITKARYHKIVIMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPL 532
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ G+ QY Y++ EL ++ + + SIQR+KGLGEM QLW+TT++P +R L
Sbjct: 533 YKISWGRNFQYAYNEQELNELLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLL 590
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ +EDA EA+ VFS LMG V+ RK+ IQ NA ++D
Sbjct: 591 QIKLEDAIEADQVFSMLMGEEVEPRKDFIQKNAQYATDID 630
>gi|325288206|ref|YP_004264387.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
gi|324963607|gb|ADY54386.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
Length = 645
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 328/651 (50%), Positives = 442/651 (67%), Gaps = 34/651 (5%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ N+
Sbjct: 12 NSPAADYNAGQIEVLEGLEAVRKRPGMYIGSTTSRGLHHLVYEIVDNSIDEAMAGFCDNV 71
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNSI P+D+HP K A+E +T+LHAGGKF G + Y VSGGLHG
Sbjct: 72 EVTIHNDNSITVKDNGRGIPVDIHPKMKKPAVEVAMTILHAGGKFSGDA--YKVSGGLHG 129
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+SVVNALSE L+V V +G+ Y Q+YSRGKP+ L K R GT+I F PD
Sbjct: 130 VGMSVVNALSEWLKVEVKINGIRYQQEYSRGKPLYDLKE---AGTYKGRTGTQISFKPDA 186
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQW 300
Q+F I +D+ + R++EL+FLN + IAL+ E + E F +GG+ +YV++
Sbjct: 187 QIFEDVI-YDYEVLEQRLKELSFLNKNIGIALKDE-----RTGAGELFKHSGGIVDYVKY 240
Query: 301 LNTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
LN +K KP++ F + +++A Q+ +D YS+ + YAN+I T +GGTH
Sbjct: 241 LNRNKDAIQPKPIY----FEAQKEENIVEIAFQY-NDGYSENIYSYANNINTTEGGTHEA 295
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G KA+LTR +N +K+ +K + +LSGE VREGLT IISV+V P+FEGQTKT+LGN
Sbjct: 296 GFKAALTRVINDYARKNNILKANENNLSGEDVREGLTAIISVKVREPQFEGQTKTKLGNS 355
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
E+R +VD + + L+ + E +P V I+ K L A +A +AA++ARDL R+K+ L S+SL
Sbjct: 356 EMRSIVDSILGDGLSTFCEENPSVAKKIVEKGLQATRARMAARKARDLTRRKNALDSTSL 415
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADC+ + EI++VEGDSAGGSAKQGRD++FQAILPLRGKILNVE+ +
Sbjct: 416 PGKLADCAWKEAQFCEIYLVEGDSAGGSAKQGRDQKFQAILPLRGKILNVEKARLDRILA 475
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
NEEI+ +I A+G G+ +DF E RY+KI+I+TDADVDG+HIR LLLTFFYRY K L +
Sbjct: 476 NEEIRAMITAMGTGI-SDDFNLEKARYNKIVIMTDADVDGSHIRILLLTFFYRYMKPLLE 534
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPL+++++GK++QY Y D EL + + IQR+KGLGEM P QLWE
Sbjct: 535 NNYVYIAQPPLFQIKKGKEIQYAYSDEELNHILEMIGRERV-EIQRYKGLGEMNPEQLWE 593
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN-AANLVNLD 705
TT+NPE R + Q+ +EDA A +F+ MG +VD RKE IQ A ++ NLD
Sbjct: 594 TTMNPETRTILQVKMEDARRAEELFTIFMGDKVDPRKEYIQKYAKDVKNLD 644
>gi|326202777|ref|ZP_08192644.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
gi|325986854|gb|EGD47683.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
Length = 642
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 329/651 (50%), Positives = 444/651 (68%), Gaps = 30/651 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 7 TSSYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVANSVDEALAGRCDTIQVI 66
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP LE V T+LHAGGKFG S YSVSGGLHGVG
Sbjct: 67 VHKDNSITVTDNGSGIPVGIHPKMGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGA 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSES+EV V R+G Y QKYSRGKP+T++ + + GT F PD +F
Sbjct: 125 SVVNALSESMEVEVKREGHIYRQKYSRGKPITSVEI----IGETEDSGTITTFKPDPDIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
I FD + + R RE+AFLN + I L ++ D EKN + + GG+ +V++LN
Sbjct: 181 ED-IVFDFDVMITRYREMAFLNRGIKIQLIDQRPDEIIEKNLH----YEGGIISFVEYLN 235
Query: 303 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+PLHD V+ F D +++A+Q+ +D Y++T+ YAN+I T +GGTH+ G ++++
Sbjct: 236 KTKEPLHDKVIYFEGIRDANIVEVAMQY-NDNYNETVFSYANNIATTEGGTHLTGFRSAI 294
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ LN +K +++ D +LSGE VREGLT +ISV++P P+FEGQTKT+LGN E+R +V
Sbjct: 295 TKVLNDYARKFNIIRENDKNLSGEDVREGLTAVISVKLPEPQFEGQTKTKLGNSEIRTLV 354
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V + L +LE +P + IL KSL+A +A AA++AR+L R+KS + SS+LPGKLAD
Sbjct: 355 ENVVSDKLNIFLEENPAIAKIILDKSLTAARARDAARKARELTRRKSAMDSSTLPGKLAD 414
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS P ++EIFIVEGDSAGGSAKQGRDR+ QAILPL GK+LNVE+ ++ NE++
Sbjct: 415 CSEKDPTKTEIFIVEGDSAGGSAKQGRDRKIQAILPLWGKMLNVEKSRLDKVFDNEKLAP 474
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG G+ G++F LRY KIII+ DADVDG+HIR LLLTFF+RY + L ++G +Y+
Sbjct: 475 VIIALGAGI-GDEFDTSKLRYDKIIIMADADVDGSHIRMLLLTFFFRYMRPLVEQGHVYI 533
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKV---KSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+PPL+KV +GK Y YDD ++ K+ + + +IQRFKGLGEM P QLWETT+
Sbjct: 534 AMPPLFKVYKGKDEYYAYDDRQVSKIFEDRGWRKDDPNVNIQRFKGLGEMNPDQLWETTM 593
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
NPE R + ++ ++DA A+ VFS MG +V+ RKE I A ++ +LDI
Sbjct: 594 NPETRTIMKVDVQDAITADEVFSMFMGEKVEPRKEYIHLHAK--DVTYLDI 642
>gi|288574018|ref|ZP_06392375.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569759|gb|EFC91316.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 637
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/644 (50%), Positives = 438/644 (68%), Gaps = 32/644 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAVRKRP MYIG T RGLHH VYE++DNAVDEA AGY S I+V +
Sbjct: 10 YTAQSIQILEGLEAVRKRPGMYIGDTATRGLHHCVYEVVDNAVDEALAGYCSEIKVTIHT 69
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D HP+ + A E VLTVLHAGGKF + Y VSGGLHGVG+SVV
Sbjct: 70 DGSVSVSDNGRGIPVDPHPSNGRPACEVVLTVLHAGGKFNNDT--YKVSGGLHGVGVSVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LE+ + R+G + Q++ +G PVT L D+ GT + F PD ++F
Sbjct: 128 NALSSWLELDICRNGKTWGQRFEKGIPVTDLEGGY----ETDKSGTTVHFMPDDEIFE-E 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F + R+RE+AFL P L I L D E+ ++ + + GGL +V++LN DK
Sbjct: 183 VCFSAEILGNRLREMAFLIPGLKITLI---DDREEKEWT-FHYEGGLASFVEYLNRDKSS 238
Query: 308 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
L V G R D I +++ LQ+ +D Y + + +AN I T++GGTH+ G+++++TR
Sbjct: 239 LFPKPIVVSGER---DSIFVEVGLQY-NDGYHERLFSFANLIHTMEGGTHVIGLRSAITR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +++K +KDKD +LSGE ++EGLTC+ISV++ +P+FEGQTKT+LGN EV+ +VD
Sbjct: 295 AINESARRNKVLKDKDANLSGEDLKEGLTCVISVKLGDPQFEGQTKTKLGNSEVKGIVDS 354
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L L+ P VL ++ K++ A +A AAK+AR+LVR K+ + +LPGKLADCS
Sbjct: 355 IVYEGLLVALDEDPSVLKPVVDKAVKARQAREAAKKARELVR-KTAMTGLNLPGKLADCS 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
PE E++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + ++EI+ +I
Sbjct: 414 GRIPENCEVYIVEGDSAGGSAKQGRDRAFQAILPLRGKILNVEKARLDRILSSKEIRTII 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
+ALG G+ GEDF LRYHKIII+TDADVDGAHI TLLLTFFYRY K L + G IY+
Sbjct: 474 QALGCGI-GEDFDTTKLRYHKIIIMTDADVDGAHISTLLLTFFYRYMKELVEGGYIYLAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V+ G+ +Y + D +L+ +S + +QR+KGLGEM P QLWETT++PE
Sbjct: 533 PPLYRVQIGRHSEYIFSDKDLRTFMNSHKDTGKKIGVQRYKGLGEMNPEQLWETTMDPEN 592
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R++K++ ++DA A+ FS LMG +V+ R+E IQ ++ V NLD
Sbjct: 593 RVMKRIEVDDALAADEYFSILMGDKVEPRREFIQAHSHEVQNLD 636
>gi|339501434|ref|YP_004699469.1| DNA gyrase subunit B [Spirochaeta caldaria DSM 7334]
gi|338835783|gb|AEJ20961.1| DNA gyrase, B subunit [Spirochaeta caldaria DSM 7334]
Length = 635
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/649 (49%), Positives = 448/649 (69%), Gaps = 32/649 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL- 134
+Y ++ IQVL+GLEAVRKRP MYIGSTG GLHHLVYE++DN+VDEA G+ ++I V L
Sbjct: 4 SYSAQSIQVLKGLEAVRKRPGMYIGSTGIDGLHHLVYEVVDNSVDEAMQGHCTDILVVLE 63
Query: 135 ------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+ DN IP+D+HP+ SALE V+T LHAGGKF +S Y VSGGLHGVG+SV
Sbjct: 64 KNDIVRVEDNGRGIPVDIHPSEKVSALELVMTKLHAGGKFDKNS--YKVSGGLHGVGVSV 121
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-T 245
VNALS EV V RDG ++QKY G P ++ + + +++GT +RF D +F T
Sbjct: 122 VNALSTWCEVFVHRDGKIHYQKYHIGVPEESVKV----IGTTNKRGTIVRFLADATIFET 177
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T FD ++ R+RELAFLN + I++R E K+ +E+ F GG+ +V++LN +K
Sbjct: 178 TTYNFD--VLSNRLRELAFLNKGIRISIRDERLTTPKS--HEFIFEGGVVSFVEYLNQNK 233
Query: 306 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
LH + G R D++ ++ A+Q+ +D +++ M + N I T +GGTH+ G K++L
Sbjct: 234 TVLHKECIYIAGTRDDIE---VECAIQY-NDGFNEIMFSFVNDINTREGGTHLVGFKSAL 289
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTLN KKSK K + SLSG+ VREGLT ++SV+VPNP+FEGQTK +LGN EV+ +V
Sbjct: 290 TRTLNEYLKKSKLAKKMEESLSGDDVREGLTAVLSVKVPNPQFEGQTKGKLGNSEVKGIV 349
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V E L +L+ HPD++++IL KS+ A KA +AA++ARD R+K+++ S+ LPGKLAD
Sbjct: 350 ESLVNEQLELFLDQHPDIVNAILEKSVLAAKARIAARQARDATRRKNLMESAGLPGKLAD 409
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS P + E+FIVEGDSAGGSAK GR+R FQAIL L GK+LNVE+ + N+++Q
Sbjct: 410 CSEKDPTKCELFIVEGDSAGGSAKMGRNRAFQAILSLWGKMLNVEKTHIEKVITNDKLQP 469
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ++G G+ G+ F LRYHKIII+ DADVDG+HIRTLLLTFFYRY L + G +Y+
Sbjct: 470 IIASIGAGI-GDSFDISKLRYHKIIIMADADVDGSHIRTLLLTFFYRYMTELIERGHVYL 528
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+PPLYK+ K+V Y YDDAE ++ S +IQR+KGLGEM P QLWETT++P
Sbjct: 529 AMPPLYKITYEKKVFYAYDDAEKDRILAESGKDPEKVAIQRYKGLGEMNPDQLWETTMDP 588
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
E+R + Q+ ++DA EA +FS+LMG +V+ R+ I+ N + + +LD+
Sbjct: 589 ERRNIVQVHMDDAVEAERIFSTLMGEQVEPRRIFIEE--NALAVSYLDV 635
>gi|429736495|ref|ZP_19270391.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
gi|429154931|gb|EKX97638.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
Length = 685
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 436/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +EV
Sbjct: 54 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVEV 113
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 114 VIHKDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 170
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS +++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 171 VSVVNALSSTMDVEVRRDGEIHAISFARG--VTQKKLHT--IGTCETTGTRVHFVPDPEI 226
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L D E+ + + F GG+ +V LN
Sbjct: 227 FTVTT-YSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHFDGGIRSFVAHLNR 283
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 284 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 342
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 343 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 402
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L EY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 403 SIVTEGLMEYFEENPAVTKRVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 462
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 463 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 522
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY K L D G +Y+
Sbjct: 523 ITAFGTGI-GEEFDLAKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIA 581
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NPE
Sbjct: 582 QPPLYQIRKEKKHFYTYSDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEG 640
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 641 RTMLQVGAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 684
>gi|198274299|ref|ZP_03206831.1| hypothetical protein BACPLE_00442 [Bacteroides plebeius DSM 17135]
gi|198272789|gb|EDY97058.1| DNA gyrase, B subunit [Bacteroides plebeius DSM 17135]
Length = 654
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/661 (48%), Positives = 431/661 (65%), Gaps = 29/661 (4%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E +N S Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA A
Sbjct: 2 SEELTQNSGS-NYSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALA 60
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
GY ++IEV + DNSI P+D H KSALE V+TVLHAGGKF S Y V
Sbjct: 61 GYCTHIEVTINEDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKV 118
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V + D GTR
Sbjct: 119 SGGLHGVGVSCVNALSTHMTTNVFRNGKIYQQEYECGKPLYA----VKEVGTTDITGTRQ 174
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--G 293
FWPD +FT ++ ++ + R+RELA+LN +TI L + E Y + F G
Sbjct: 175 TFWPDGSIFTVT-EYKYSILQARMRELAYLNKGITITLTDKRVKEEDGSYKQEKFHSEEG 233
Query: 294 LEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++E+V++LN++ PL DV+ + GI I+ A+ + + + + + Y N+I TI+GGT
Sbjct: 234 VKEFVRFLNSNNTPLIDDVIYLNTEKQGIPIECAIMY-NTGFRENLHSYVNNINTIEGGT 292
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H G + +LTR L ++SK ++ + +SGE REGL +ISV+V P+FEGQTKT+L
Sbjct: 293 HEAGFRMALTRVLKKYAEESKALEKAKVEISGEDFREGLIAVISVKVSEPQFEGQTKTKL 352
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV V+Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS +
Sbjct: 353 GNNEVSGAVNQAVGEALTYYLEEHPKEAKIIVDKVVLAATARVAARKARESVQRKSPMGG 412
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
LPGKLADCSS EE E+F+VEGDSAGGSAKQGR R+FQAILPLRGKILNVE+
Sbjct: 413 GGLPGKLADCSSRVAEECELFLVEGDSAGGSAKQGRSRQFQAILPLRGKILNVEKAMWHK 472
Query: 533 MYKNEEIQNLIRALGL--GVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFF 586
++++E+ N+I+ALG+ GV GE+ K+A LRYHK+II+TDADVDG+HI TL++T F
Sbjct: 473 AFESDEVNNIIQALGVRFGVDGEEDSKKANIDKLRYHKVIIMTDADVDGSHIDTLIMTLF 532
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKG 644
YRY + G +Y+ PPLYK +GK +YCY D + + I QR+KG
Sbjct: 533 YRYMPEVIQGGHLYIATPPLYKCSKGKISEYCYTDEARQAFIQKYGEGNEQGIHTQRYKG 592
Query: 645 LGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
LGEM P QLWETT+NPE R+LKQ+ IE+AAEA+ +FS LMG V R+E I+ A N+
Sbjct: 593 LGEMNPEQLWETTMNPETRILKQVNIENAAEADYIFSMLMGDDVGPRREFIEKNATYANI 652
Query: 705 D 705
D
Sbjct: 653 D 653
>gi|330507223|ref|YP_004383651.1| DNA gyrase subunit B [Methanosaeta concilii GP6]
gi|328928031|gb|AEB67833.1| DNA gyrase, B subunit [Methanosaeta concilii GP6]
Length = 630
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 326/640 (50%), Positives = 443/640 (69%), Gaps = 28/640 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVR+RP+MYIGST GLHHLVYE++DN+VDEA G+ S I+V +
Sbjct: 7 YDASHIQVLEGLEAVRRRPSMYIGSTDSLGLHHLVYEVVDNSVDEALGGFCSEIDVTINP 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
S IP+D HP N+ ALE VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 GGSVSIRDDGRGIPVDNHPQFNRPALEIVLTVLHAGGKFDHES--YGVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +EV V R+G Y Q++ +GK V+ L S D GT I F PD +F
Sbjct: 125 NALSEWMEVQVRRNGRIYWQRFEKGKVVSDLEER----GSSDHTGTTITFKPDTSIFEET 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F +T++ R+RELAFLN L I ++ + SD E N + +AGG+ +V++LN +K+
Sbjct: 181 -EFSFDTLSSRLRELAFLNRGLKITIKDDRSDKE----NIFQYAGGIISFVEYLNKNKEV 235
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ V F + +G +++ALQ+ +++Y++ + YAN I T +GGTH+ G +A+LTRT+N
Sbjct: 236 LHEQPVYFSRSKNGTQVEVALQY-NNSYAENIFSYANIINTREGGTHLMGFRAALTRTVN 294
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ +K K+ ++ L GE +REGL +ISV++P+P+FEGQTKTRLGN +R +V+ V
Sbjct: 295 DYARNNKLFKN-EMKLGGEDLREGLVAVISVKLPDPQFEGQTKTRLGNSSIRGIVESMVA 353
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L EY E +P V +I+ K+ A++A AA++A++L R+K+ L S LPGKLADCS
Sbjct: 354 EGLGEYFEENPLVATTIVEKAAEAMRAREAARKAKELTRRKNALSSGGLPGKLADCSDND 413
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P + EI+IVEG+SAGGSAKQGR+R FQAILPLRGKILNVER + KN EI+N+I A
Sbjct: 414 PAKCEIYIVEGESAGGSAKQGRNRHFQAILPLRGKILNVERARLDKILKNAEIRNMIVAF 473
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV G+DF RYHK++I+TDADVDG+HIRTLLLTFFYRY + L D G +++ PPL
Sbjct: 474 GTGV-GDDFDISKARYHKVVIMTDADVDGSHIRTLLLTFFYRYMRPLIDAGYVFIAQPPL 532
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V++GKQ Y Y D +L ++ + IQR+KGLGEM P QLWETT++PE R++
Sbjct: 533 YQVKKGKQANYAYSDEQLNELVAGMNKPV---IQRYKGLGEMNPEQLWETTMDPEGRIML 589
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ +EDA EA+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 RVTLEDAVEADRIFTILMGDQVEPRREFIEKHAKYVKNLD 629
>gi|89101114|ref|ZP_01173950.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
gi|89084169|gb|EAR63334.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
Length = 640
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 331/642 (51%), Positives = 440/642 (68%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V +
Sbjct: 9 QSYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEINVII 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 69 EKDNSITVVDDGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V RDG ++QK+ RG P L + + GT I F PD ++FT
Sbjct: 127 VVNALSTELEVFVRRDGKLHYQKFERGVPAADLKV----IGEAEETGTTIHFKPDGEIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++++ +A RIRELAFLN L I + ED E N+ +EYF+ GG++ YV+ LN K
Sbjct: 183 ETLEYEYEILANRIRELAFLNRGLKITI--EDKRAE-NKKSEYFYEGGIKSYVEHLNRTK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + +GIT+++A+Q+ +D ++ + YAN+I T +GGTH G K +LTR
Sbjct: 240 EVLHEEPIYIEGEKEGITVEVAIQY-NDGFTGNIYSYANNIHTYEGGTHESGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ KD D +LSGE VREGLT I+S++ P+P+FEGQTKT+LGN EVR V D
Sbjct: 299 INDYARKNGIFKDSDANLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRTVTDTF 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
++ ++L +P V ++ K L A +A LAAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSDHFEKFLMENPQVARKVVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 419 KDPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF+ RYHKI+I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AAGTGI-GDDFEISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV++GK+V+Y Y+D +L ++ P +IQR+KGLGEM P QLWETT++P R
Sbjct: 538 PLYKVQQGKRVEYAYNDKQLDQIFEELPKAPKPNIQRYKGLGEMNPEQLWETTMDPGTRT 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA EA+ F LMG +V+ R++ I+ NA + NLD
Sbjct: 598 LLQVSLEDAIEADETFEILMGDKVEPRRQFIEDNAVYVKNLD 639
>gi|409198278|ref|ZP_11226941.1| DNA gyrase subunit B [Marinilabilia salmonicolor JCM 21150]
Length = 655
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 321/661 (48%), Positives = 443/661 (67%), Gaps = 28/661 (4%)
Query: 65 TEAFKENPVSKT--YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
++ E + KT Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA
Sbjct: 2 SDNINEGNLEKTNGYSASSIQVLEGLEAVRKRPAMYIGDVGYKGLHHLVYEVVDNSIDEA 61
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AGY ++I V + DNSI P+D H +SALE V+TVLHAGGKF S Y
Sbjct: 62 LAGYCTSIGVTINEDNSITVVDNGRGIPVDFHEKEGRSALEVVMTVLHAGGKFDKDS--Y 119
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
VSGGLHGVG+S VNALS SL+ V RDG Y Q+YS+GKP++++ V + D GT
Sbjct: 120 KVSGGLHGVGVSCVNALSISLKAEVHRDGKIYRQEYSKGKPLSSIE----EVGTTDINGT 175
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-RKEDSDPEKNQYNEYFFAG 292
I F PD +F ++ ++ +A R+REL+FLN L I L K + D E N +E F++
Sbjct: 176 WITFKPDDSIFNET-EYKYSVLANRMRELSFLNAGLEIVLIDKREVDDEGNVKSERFYSD 234
Query: 293 -GLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 350
GL E+V++++ +++ L D + + + + +D+A+ + + ++++ + Y N+I TI+G
Sbjct: 235 EGLLEFVKFIDVNREHLIDQPISISTEKNDVPVDIAIVYNT-SFNENIYSYVNNINTIEG 293
Query: 351 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 410
GTH+ G + LTRTL + KS + +SG+ REGLT +ISV+V P+FEGQTKT
Sbjct: 294 GTHLTGFRRGLTRTLKNWADKSGLLSKLKFDISGDDFREGLTAVISVKVAEPQFEGQTKT 353
Query: 411 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 470
+LGN EV VDQ+V L YLE +P +I++K + A A AA++AR+LV++KSVL
Sbjct: 354 KLGNSEVSLAVDQAVSTMLNNYLEENPKDAKAIVNKVILAATARHAARKARELVQRKSVL 413
Query: 471 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 530
LPGKLADCS P +SEIF+VEGDSAGG+AKQGR RRFQAILPLRGKILNVE+ +
Sbjct: 414 TGGGLPGKLADCSEKDPAQSEIFLVEGDSAGGTAKQGRSRRFQAILPLRGKILNVEKALQ 473
Query: 531 AAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFF 586
+++++EI+N+ ALG+ + ED K E LRYHKI+I+TDADVDG HI TL++TFF
Sbjct: 474 HRVFESDEIKNIFTALGVNIGTEDDSKALNTEKLRYHKIVIMTDADVDGRHINTLIMTFF 533
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS--IQRFKG 644
+RY K L +G +Y+ PPLY +++GK QYC+ DA+ ++ F S IQR+KG
Sbjct: 534 FRYMKELIKDGYLYIAAPPLYFLKKGKNEQYCWTDAQRREFVEKFADGKEDSVHIQRYKG 593
Query: 645 LGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
LGEM QLW TT+NPE R+L+Q+ ++AAEA+ +FS LMG V R+E I+ A N+
Sbjct: 594 LGEMNAEQLWHTTMNPENRLLRQVTYDNAAEADRIFSMLMGDDVPPRREFIEKNATYANI 653
Query: 705 D 705
D
Sbjct: 654 D 654
>gi|418312245|ref|ZP_12923755.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
gi|365238593|gb|EHM79425.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
Length = 644
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ + YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNEIIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIKITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNANQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|160941457|ref|ZP_02088792.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
gi|158435603|gb|EDP13370.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
Length = 637
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 325/646 (50%), Positives = 440/646 (68%), Gaps = 23/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVMDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV V++DG Y Q+Y RGK T ++ ++ GTR+ F PDK++
Sbjct: 119 ASVVNALSEWLEVQVYKDGNIYQQRYERGK--VTYPLKIVGKCGPEQHGTRVTFLPDKEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F + +D++T+ R+RE AFL L I L K+D D +K + + + GG++E+V +LN
Sbjct: 177 FEETV-YDYDTLKIRLRETAFLTKNLKIIL-KDDRDEKKEKV--FHYEGGIKEFVTYLNK 232
Query: 304 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K P++D V + + +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPIYDQVIYCEGTREGVYVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T N ++ K +KD + +LSGE +REGLT IISV++ +P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYAREKKLLKDSEDNLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARAAVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LT +LE +P V S+ KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPAVAKSMCEKSILAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE EI+IVEGDSAGGSAK R R QAILPLRGKILNVE+ +Y N EI+ +
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ +DF LRYHKIII+TDADVDGAHI TLLLTF YR+ L +G +Y+
Sbjct: 472 ITAFGTGIH-DDFDISKLRYHKIIIMTDADVDGAHISTLLLTFIYRFMPELIKQGYVYLA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVE+ K+V Y Y D EL + + IQR+KGLGEM QLWETT++PE+
Sbjct: 531 QPPLYKVEKNKKVWYAYSDDELNSILKEIGRDNSNKIQRYKGLGEMDAEQLWETTMDPER 590
Query: 663 RMLKQLVI--EDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R+L ++ + E +E ++ F++LMG +V+ R+E I+ NA + NLD
Sbjct: 591 RILLRVTMDEETTSEVDLTFTTLMGDQVEPRREFIEANAKKVKNLD 636
>gi|227498783|ref|ZP_03928923.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|352683418|ref|YP_004895401.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
gi|226904235|gb|EEH90153.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|350278071|gb|AEQ21261.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
Length = 648
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 330/652 (50%), Positives = 446/652 (68%), Gaps = 31/652 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E V YG+EQIQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY
Sbjct: 12 EEIAVHGEYGAEQIQVLEGLEAVRKRPSMYIGSISARGLHHLVYEVIDNSIDEALAGYCD 71
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I V + DNSI P+++H K A+E V+T+LHAGGKFG GY VSGGL
Sbjct: 72 HILVEIGEDNSITVVDNGRGIPVEMHK-IGKPAIEVVMTILHAGGKFG--DGGYKVSGGL 128
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS +EV V +DG Y ++S+GK V L D+KD GT + FWP
Sbjct: 129 HGVGVSCVNALSRRMEVEVKKDGKIYGIEFSKGKTVRPLYVKG-ECDAKD-TGTSVHFWP 186
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
D +FT + + + T+ RIRELAFLN + I L+ + S ++ + + GG+ +V+
Sbjct: 187 DDTIFTETV-YSYETLKHRIRELAFLNKGVKIELKDDRSGADEI----FHYEGGIISFVE 241
Query: 300 WLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
++N K+ + + V G R+D +++A+Q+ +DAY++ + + N+I T +GGTH+
Sbjct: 242 YINKGKEAIFNTPIYVEGERQDT---IVEVAMQY-TDAYTENIYTFVNNINTEEGGTHLA 297
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G+K +LTR++N +K+ +KD + +LSG+ VREGLTC++S++V P+FEGQTKT+LGN
Sbjct: 298 GLKQALTRSINDYARKNGLLKDSEENLSGDDVREGLTCVLSLKVREPQFEGQTKTKLGNS 357
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR +VD V + L EY E + I+ K++ + +A AA++ARDL R+KS L SSL
Sbjct: 358 EVRGIVDNMVSDALNEYFEENAPTAKKIVEKAILSSRARAAARKARDLTRRKSALEVSSL 417
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS EE+EI+IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ M
Sbjct: 418 PGKLADCSSKNAEETEIYIVEGDSAGGSAKQGRDRAFQAILPLRGKILNVEKARLDKMLN 477
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N EI+++I A G G+ G++F +RY KIII+TDADVDGAHIRTLLLTFFYRY + L
Sbjct: 478 NNEIRSMITAFGCGI-GDEFDLSKIRYGKIIIMTDADVDGAHIRTLLLTFFYRYMQPLIR 536
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
G +++ PPLY + GK Y Y D EL KK+ N Y +QR+KGLGEM P QLW
Sbjct: 537 NGNVFIAQPPLYLIRTGKNHTYAYSDDELQKKLDEVGRQNNPY-VQRYKGLGEMNPEQLW 595
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
ETT++P +R + Q+ +EDAA A+ VFS LMG +V+ R++ I +NA + NLD
Sbjct: 596 ETTMDPSKRTVLQVHLEDAASADSVFSVLMGDKVEPRRQFIEENAGKVTNLD 647
>gi|253681222|ref|ZP_04862020.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
gi|253562460|gb|EES91911.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
Length = 636
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 329/643 (51%), Positives = 454/643 (70%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 5 QVYDESQIQVLEGLEAVRKRPGMYIGSTGIRGLHHLVYEIVDNSIDEALAGFCQNIKVYI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS+ P+ +HP + +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 65 HKDNSVTVKDDGRGMPVGIHPKMKRPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ +V V R+G + Q+Y +GK + L + D +GT + F PD ++F
Sbjct: 123 VVNALSKYCKVEVRREGHIWMQEYKKGKVASELEI----IGDSDEKGTLVYFEPDDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+QFD++T+A R+RELAFLN + I L E + EK Q E+ + GG++ +V +LN +K
Sbjct: 179 -EVQFDYDTLAHRLRELAFLNKGIRITLIDE-REEEKKQ--EFHYEGGIKSFVSYLNRNK 234
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH D + + D +++ALQ+ +D Y+D + +AN+I TI+GGTH+ G K++LTR
Sbjct: 235 QTLHEDPIYVEGNKDDYLVEVALQY-NDTYNDNIFAFANNIDTIEGGTHLAGFKSALTRA 293
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
LN ++ +K+ D +LSG+ REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 294 LNDYARRYGYLKEADKNLSGDDTREGLTAVISVKLTDPQFEGQTKTKLGNTEVRGIVDSI 353
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E ++E+LE +P+ +++ KSL+A +A AAK+AR+L R+KSVL S++LPGKLADCSS
Sbjct: 354 VFERVSEFLEENPNTAKTVIEKSLTAARAREAAKKARELTRRKSVLESTALPGKLADCSS 413
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE++ + +E+I+ +I
Sbjct: 414 KDPSECEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKIMNVEKQRLDKILNSEQIRAMIT 473
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF E +RYH+III+TDADVDGAHI TLLLTFFYRY + L + G +Y+ P
Sbjct: 474 AFGAGI-GKDFDIEKIRYHRIIIMTDADVDGAHIATLLLTFFYRYMRELVEGGHVYIAQP 532
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V++GK ++Y Y D EL++V + + IQR+KGLGEM QLW+TT+NPE R
Sbjct: 533 PLYQVKKGKIIRYSYSDNELQQVLTEIGGKDKNTEIQRYKGLGEMDATQLWDTTMNPEHR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L ++ I+DA A+ +F+ LMG +V+ R+E I +NA +VNLD
Sbjct: 593 TLVKVTIDDAMRADEIFTILMGDKVEPRREFIEENAKRVVNLD 635
>gi|340759260|ref|ZP_08695832.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
gi|251835455|gb|EES63995.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
Length = 635
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 325/645 (50%), Positives = 431/645 (66%), Gaps = 23/645 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DNAVDEA AGY I V
Sbjct: 1 MSNNYQAENITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNAVDEALAGYCDKIVV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L DN IP+ +HP NKSALE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 NILPDNIIEVIDNGRGIPVGIHPKYNKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS +VTV DG ++QKY+RG P V + GT +RF D ++
Sbjct: 119 VSVVNALSLWTDVTVKTDGKIWYQKYNRGVP----EEDVKEIGVTTEHGTTVRFKADHEI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T I +D+NT+ R++ELA+LN L I L +P K + E+ F GG+ ++++ +
Sbjct: 175 FETLI-YDYNTLKNRLKELAYLNKGLEIHLSDSRKEPYKKE--EFKFEGGIVDFLKEITE 231
Query: 304 D-KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +K + + + +VD + +D+A + + S+ + + N+I T +GGTH+ G + +LT
Sbjct: 232 ETEKLIPEPIYMTGEVDNVAVDIAFLYTVNQ-SEIIYSFVNNINTHEGGTHVSGFRTALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +GK +K+KD L G +REG+T I+SV+VP P+FEGQTKT+LGN EV +V
Sbjct: 291 RVINDVGKAQGYLKEKDGKLQGNDIREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVS 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V L LE +P+ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC
Sbjct: 351 TLVGTNLKIVLEDNPNDTKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P+E EI+IVEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +N E++ +
Sbjct: 411 SSKNPDECEIYIVEGDSAGGSAKQGRDRSHQAILPLRGKILNVEKAGLHKSLENNEVRAM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G + G+ F E LRY KII++TDADVDGAHIRTLLLTF YR+ L G +Y+
Sbjct: 471 ITAFGTSI-GDSFNIEKLRYGKIILMTDADVDGAHIRTLLLTFIYRFMVDLIYNGNVYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYK+ GKQ++Y Y D ELK++ F + Y++QR+KGLGEM P QLWETT+NP+
Sbjct: 530 QPPLYKITTGKQIRYAYSDRELKEITDVFEGDDKKYTLQRYKGLGEMNPEQLWETTMNPD 589
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R L Q+ I+DA A+++F LMG +VD R+E I +NA + NLD
Sbjct: 590 TRTLLQVTIDDARAADMLFDKLMGDKVDPRREFIEENAVYVKNLD 634
>gi|315640352|ref|ZP_07895468.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
gi|315483888|gb|EFU74368.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
Length = 649
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 326/647 (50%), Positives = 437/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ IEV
Sbjct: 12 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATKIEVV 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 VEKDNSITVTDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +L+V V+++G Y Q+Y RG V+ LT + DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVFKEGKVYFQEYHRGAVVSDLTI----IGETDRHGTEVHFVPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
F+ +A R+RELAFLN L I++ ED E+ + + F GG++ YV+ LN
Sbjct: 186 RETTTFEFEKLATRVRELAFLNRGLHISI--EDKRKEEAEVRAFHFEGGIKSYVEHLNAT 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K L + + + I++++++Q+ +D Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVLFPEPIYLEGNQQDISVEVSMQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +++ D +LSGE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKQKLMRESDENLSGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A KA LAAKRAR++ R+K L SSLPGKLADCS
Sbjct: 363 LFSEHFAKFLMENPTVGRQIVEKGLLASKARLAAKRAREVTRRKGALEISSLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S ++ E+FIVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SREADKCELFIVEGDSAGGSAKQGRDREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 TAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK++ SS P++ ++QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNITYVQPGKQAEDELKQIVSSLPASPKPNVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE RM+ Q+ ++DA EA+ VF LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PENRMMLQVSVDDAIEADQVFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|82749782|ref|YP_415523.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
gi|82655313|emb|CAI79693.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
Length = 644
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 436/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G+DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGI-GDDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSKLNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|160883910|ref|ZP_02064913.1| hypothetical protein BACOVA_01884 [Bacteroides ovatus ATCC 8483]
gi|336417360|ref|ZP_08597684.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|423290605|ref|ZP_17269454.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|423294128|ref|ZP_17272255.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
gi|156110640|gb|EDO12385.1| DNA gyrase, B subunit [Bacteroides ovatus ATCC 8483]
gi|335936106|gb|EGM98046.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|392665258|gb|EIY58786.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|392676624|gb|EIY70055.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
Length = 652
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/653 (48%), Positives = 436/653 (66%), Gaps = 28/653 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+RDG Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDNT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I L E + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRITLTDRRVVNEDGSFKGEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++EI
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + ++ KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM Q
Sbjct: 540 NGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 LWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|350565207|ref|ZP_08933993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
gi|348663986|gb|EGY80513.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
Length = 640
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 449/641 (70%), Gaps = 21/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+E IQVL GLE VRKRP MYIGSTG +GLHHLVYEI+DN++DEA AG S I + +
Sbjct: 8 YGAENIQVLTGLEPVRKRPGMYIGSTGSKGLHHLVYEIVDNSIDEALAGRCSEITIEIEK 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP D+HP T KS +ETVLT+LHAGGKF S+ Y VSGGLHGVG+SVV
Sbjct: 68 DGSVSVSDDGRGIPTDIHPQTKKSTVETVLTILHAGGKF--SNDAYKVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L TV R+G + Q +SRG P + L ++ ++ GT+I F PD ++F T
Sbjct: 126 NALSTKLTATVKREGKIHQQTFSRGIPTSEL--EIIGKVAESDTGTKISFSPDPEIFDTL 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I F+ + ++ R RE+AFLN + I R D EK + Y + GG++ +V+++N K P
Sbjct: 184 I-FEWDILSKRFREMAFLNKGVRINFR--DYREEKVREEVYHYEGGIKSFVEYINRKKTP 240
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H ++V ++ D +++A+Q+ +DAYS+ ++ +AN+I T +GG+H+ G +++LTRT+N
Sbjct: 241 IHKEIVYIDQEKDKTLVEIAIQY-TDAYSENVISFANNINTEEGGSHLSGFRSALTRTIN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+K +K+K+ +LSG+ VREGL+ +ISV++PNP+FEGQTK +LGN E R +VD V
Sbjct: 300 EYGRKYNIIKEKEENLSGDDVREGLSAVISVKLPNPQFEGQTKAKLGNSETRGIVDSVVS 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ LT++LE +P V IL K+LSA +A AA+RARDL R+K++L + LPGKL+DC +
Sbjct: 360 DVLTDFLEENPKVGKLILDKALSARRAREAARRARDLSRKKNMLDAMPLPGKLSDCQLSD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
E +EIF+VEG+SAGGSA + RD FQAILPLRGKI+NVE+ M ++EI+ +I A
Sbjct: 420 NENTEIFLVEGNSAGGSAVEARDSVFQAILPLRGKIMNVEKARLDKMLASDEIKAMITAF 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+DF E LRY+KI+I+TDADVDGAHI TLLLTFF+RY + L ++G +YV PPL
Sbjct: 480 GTGI-GQDFNIENLRYNKIVIMTDADVDGAHIMTLLLTFFFRYMRPLIEQGHVYVAQPPL 538
Query: 607 YKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
+ + +G K ++Y YD+ ELKK + Y I+R+KGLGEM LWETT++PE+R+L
Sbjct: 539 FGILKGNKPLKYVYDELELKKSLEELGRDKKYDIKRYKGLGEMNAEDLWETTMDPEKRVL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ IEDA EA+ FS LMG+ V+ R+E I +NA N+D
Sbjct: 599 LKIDIEDAVEADETFSILMGSDVEPRREFIEENALFAENID 639
>gi|427384558|ref|ZP_18881063.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
gi|425727819|gb|EKU90678.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
Length = 653
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/655 (48%), Positives = 440/655 (67%), Gaps = 29/655 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +I
Sbjct: 7 NSNNGNYSAENIQVLEGLEAVRKRPAMYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHI 66
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHG
Sbjct: 67 EVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHG 124
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+S VNALS + V+R+G Y Q+Y G P V + + D GTR +FWPD
Sbjct: 125 VGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP----QYPVKEIGTSDITGTRQQFWPDN 180
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQ 299
+FT + +++ +A R+RELA+LN + I L D E N E F++ GL+E+V+
Sbjct: 181 TIFTETV-YNYEILASRMRELAYLNAGIKITLTDLRVKDEEGNAKMEMFYSEEGLKEFVR 239
Query: 300 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++++ ++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G +
Sbjct: 240 YIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFR 298
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRTL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 RALTRTLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVQEPQFEGQTKTKLGNSEVM 358
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
VDQ+V E L YLE HP ++ K + A +A +AA++AR+ V++KS + +PGK
Sbjct: 359 GAVDQAVGEALNYYLEEHPKEAKLVVDKVILAAQARVAARKARESVQRKSPMSGGGMPGK 418
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS PEE E+F+VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++++E
Sbjct: 419 LADCSSKDPEECELFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAMWHKAFESDE 478
Query: 539 IQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
+ N+I+ALG+ GV GED K+ + LRY K+II+TDADVDG+HI TL++T F+RY +
Sbjct: 479 VNNIIQALGIRFGVDGEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQV 538
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMP 650
G +Y+ PPLY ++GK +YC+ D + +K ++ NA+++ QR+KGLGEM P
Sbjct: 539 IRNGYLYIATPPLYLCKKGKVEEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNP 597
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW TT+NP+ RMLKQ+ IE+AAE + VFS LMG V R+E I+ A N+D
Sbjct: 598 EQLWSTTMNPDNRMLKQISIENAAEVDYVFSMLMGEDVGPRREFIEKNATYANID 652
>gi|313147892|ref|ZP_07810085.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423281169|ref|ZP_17260080.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
gi|424665894|ref|ZP_18102930.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|313136659|gb|EFR54019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574147|gb|EKA78898.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|404583333|gb|EKA88014.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
Length = 652
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/657 (48%), Positives = 441/657 (67%), Gaps = 29/657 (4%)
Query: 69 KENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++NP + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY
Sbjct: 4 EQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYC 63
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+IEV + DNSI P+D H KSALE +TVLHAGGKF S Y VSGG
Sbjct: 64 DHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGG 121
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V + D GT+ +FW
Sbjct: 122 LHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYA----VKEVGTADHTGTKQQFW 177
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEE 296
PD +FT + +D+ +A R+RELA+LN L I+L R+ ++ ++ ++ GL E
Sbjct: 178 PDDSIFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVINEDGSFKHETFYSEEGLRE 236
Query: 297 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V+++ + ++ L +DV+ + I I++A+ + + +S+ + Y N+I TI+GGTH+
Sbjct: 237 FVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-GFSENIHSYVNNINTIEGGTHLA 295
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G + +LTRTL + SK ++ I +SG+ REGLT +ISV+V P+FEGQTKT+LGN
Sbjct: 296 GFRRALTRTLKKYAEDSKMLEKVKIEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNN 355
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EV VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + L
Sbjct: 356 EVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGGL 415
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +
Sbjct: 416 PGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKALE 475
Query: 536 NEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+EEI+N+ ALG+ + E+ K A LRYHKIII+TDADVDG+HI TL++TFF+RY
Sbjct: 476 SEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMP 535
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEM 648
+ G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM
Sbjct: 536 QIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEM 594
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 595 NAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|189464548|ref|ZP_03013333.1| hypothetical protein BACINT_00891 [Bacteroides intestinalis DSM
17393]
gi|189438338|gb|EDV07323.1| DNA gyrase, B subunit [Bacteroides intestinalis DSM 17393]
Length = 653
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 314/654 (48%), Positives = 436/654 (66%), Gaps = 27/654 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +I
Sbjct: 7 NSNSGNYSAENIQVLEGLEAVRKRPAMYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHI 66
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
EV + DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHG
Sbjct: 67 EVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHG 124
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+S VNALS + V+R+G Y Q+Y G P+ V + + D GTR +FWPD
Sbjct: 125 VGVSCVNALSTHMTTQVFRNGKIYQQEYECGHPLYP----VKEIGTSDITGTRQQFWPDN 180
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQ 299
+FT + +++ +A R+RELA+LN + I L D E N E F++ GL+E+V+
Sbjct: 181 TIFTDTV-YNYEILATRMRELAYLNAGIKITLTDLRVKDEENNAKMEIFYSEEGLKEFVR 239
Query: 300 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++++ ++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G +
Sbjct: 240 YIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFR 298
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRTL +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 RALTRTLKKYADDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVM 358
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
VDQ+V E L YLE HP ++ K + A +A +AA++AR+ V++KS + +PGK
Sbjct: 359 GAVDQAVGEALNYYLEEHPKEAKMVVDKVILAAQARVAARKARESVQRKSPMSGGGMPGK 418
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS PEE E+F+VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++++E
Sbjct: 419 LADCSSKDPEECELFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAMWHKAFESDE 478
Query: 539 IQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
+ N+I+ALG+ GV ED K+ + LRY K+II+TDADVDG+HI TL++T F+RY +
Sbjct: 479 VNNIIQALGIRFGVNTEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQV 538
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF--PSNALYSIQRFKGLGEMMPV 651
G +Y+ PPLY ++GK +YC+ D + +K ++ S + QR+KGLGEM P
Sbjct: 539 IRNGYLYIATPPLYLCKKGKVEEYCWTDQQRQKFIDTYGGGSESAVHTQRYKGLGEMNPE 598
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW TT+NPE RMLKQ+ IE+AAE + +FS LMG V R+E I+ A N+D
Sbjct: 599 QLWSTTMNPENRMLKQISIENAAEVDYIFSMLMGEDVGPRREFIEKNATYANID 652
>gi|257127028|ref|YP_003165142.1| DNA gyrase subunit beta [Leptotrichia buccalis C-1013-b]
gi|257050967|gb|ACV40151.1| DNA gyrase, B subunit [Leptotrichia buccalis C-1013-b]
Length = 660
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/668 (48%), Positives = 438/668 (65%), Gaps = 44/668 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+E I VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDEA AG I V
Sbjct: 1 MDNNYGAEAITVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSVDEALAGICDKITV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L N IP+ +H T KS LE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 KILEGNIIEVSDNGRGIPVGMHK-TGKSTLEVVLTVLHAGGKF--DNDNYKVSGGLHGVG 117
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LE TV RDG + Q Y RG P T + V GT +RF D ++
Sbjct: 118 VSVVNALSEWLEATVTRDGKIFRQTYERGVP--TSPVEEIGVADDSAHGTVVRFKADDEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T + +D++ + R++ELA+LN L I L E + E + E+ F GG+++++ +
Sbjct: 176 FETTV-YDYSVLESRLKELAYLNKGLKIELADE-RNAENVKAEEFLFEGGIKDFLNEIID 233
Query: 304 DKKPLHDVVGFR-------------KDVDG-----------ITIDLALQWCSDAYSDTML 339
++K + DV+ +D +G + +++A+ + + + +T+
Sbjct: 234 EEKIIDDVIYMADTMQIEEAKEVEAEDENGNIVIKQRSAKFVEVEIAMNYTT-SQRETVY 292
Query: 340 GYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRV 399
+ N+I T +GGTH+ G + +LTRT+N + K+ +KDK+ + G VREGL C+ISV++
Sbjct: 293 SFVNNINTHEGGTHVSGFRTALTRTINDIAKQMNLIKDKNGTFQGTDVREGLVCVISVKI 352
Query: 400 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKR 459
P P+FEGQTKT+LGN EV +V V L YLE HP + ++ K + + +A AAK+
Sbjct: 353 PEPQFEGQTKTKLGNSEVTGIVSNIVGSNLKFYLEDHPKAAEKVIEKMVMSKRAREAAKK 412
Query: 460 ARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLR 519
AR+LV +K+ L SLPGKLADCSS P ESEIFIVEG+SAGGSAKQGRDRRFQAILPLR
Sbjct: 413 ARELVLRKNTLEVGSLPGKLADCSSKDPAESEIFIVEGNSAGGSAKQGRDRRFQAILPLR 472
Query: 520 GKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIR 579
GKILNVE+ +N EI+ +I A G G GE+ + LRYHKI+I+TDADVDGAHIR
Sbjct: 473 GKILNVEKSGIHKALENAEIRAMITAFGAGF-GEEIDLKKLRYHKIVIMTDADVDGAHIR 531
Query: 580 TLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YS 638
TL+LTFFYR+ + L +EG IY+ PPLYK++ GK ++Y Y D ++K+V + Y+
Sbjct: 532 TLMLTFFYRHLRELINEGYIYIAQPPLYKIQAGKAIRYAYSDDQMKQVTRVLENEGRKYT 591
Query: 639 IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNA 698
IQR+KGLGEM P QLWETTL+PE R L ++ +EDA+ A+ +F+ LMG +V+ R++ I++
Sbjct: 592 IQRYKGLGEMNPEQLWETTLDPEVRTLLKVSMEDASYADKMFNILMGDKVEPRRKFIEDN 651
Query: 699 ANLV-NLD 705
AN V NLD
Sbjct: 652 ANYVRNLD 659
>gi|257871393|ref|ZP_05651046.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
gi|257805557|gb|EEV34379.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
Length = 649
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 437/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V
Sbjct: 12 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATAIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEEDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +L+V V+++G Y+Q+Y RG V L + DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVFKEGKVYYQEYHRGAVVEDLKV----IGETDRHGTTVHFVPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T F+ + +A R+RELAFLN L I++ ED E EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEHPVLKEYHYDGGIKSYVEHLNAS 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + + + GIT++++LQ+ +D+Y + +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPEPIYLEGEQQGITVEVSLQY-TDSYHNNLLSFANNIHTYEGGTHESGFKTALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ T++L +P V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPAVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 TAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + +LK S P+ S+QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPSVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|334338619|ref|YP_004543599.1| DNA gyrase subunit B [Desulfotomaculum ruminis DSM 2154]
gi|334089973|gb|AEG58313.1| DNA gyrase, B subunit [Desulfotomaculum ruminis DSM 2154]
Length = 639
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 333/640 (52%), Positives = 439/640 (68%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY S IEV +
Sbjct: 11 YSADQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCSRIEVIIHK 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+ + K A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 71 DNSVTVEDDGRGIPVGIQSKVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV + DG Y+QKYSRG PVT L + GT+I F PD+++F
Sbjct: 129 NALSSELEVEIKLDGNLYYQKYSRGIPVTELKI----IGKSKSTGTKITFKPDEEIFEEL 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F TI+ R+RELA+LN + I LR E + E Q +Y GG++++V+ LN +K+
Sbjct: 185 V-FSLETISQRMRELAYLNKGIKIILRDERKETENEQVFQY--EGGIQDFVKHLNRNKQV 241
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH + + + +++++A+Q+ +D+YS+TML YAN+I T +GGTH G K +LTR +N
Sbjct: 242 LHAKPIYLSGEKEYVSVEIAMQY-NDSYSETMLSYANNIHTTEGGTHEVGFKTALTRIIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+ +K+ D +L GE +REG T +ISV+VP P+FEGQTKT+LGN EVR +VD
Sbjct: 301 DYGRTHNILKNNDPNLIGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVDSIFS 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+ YLE +P V I+ K ++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 361 EALSTYLEENPSVAKKIIEKGVTASRAREAARKARELTRRKSALETMSLPGKLADCSEKD 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I AL
Sbjct: 421 PSLCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKILANEEIRAMITAL 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GEDF RYHKI+I+TDADVDG+HIRTLL+TFFYR+ + L + G +YV PPL
Sbjct: 481 GCGI-GEDFDISKARYHKIVIMTDADVDGSHIRTLLMTFFYRHMRELIEAGYLYVAQPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+ +GK Y Y D EL+++ + + +IQR+KGLGEM P QLWETT++P+ R +
Sbjct: 540 YRARKGKHDSYLYSDEELEQLLKRIGYDNV-NIQRYKGLGEMNPEQLWETTMDPDTRTML 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ +EDA EA+ FS LMG RV+ RK+ IQ A V NLD
Sbjct: 599 QVTLEDALEADATFSMLMGDRVEPRKDFIQENARYVRNLD 638
>gi|29348838|ref|NP_812341.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|298387912|ref|ZP_06997461.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
gi|383125011|ref|ZP_09945670.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|29340744|gb|AAO78535.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|251840836|gb|EES68917.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|298259319|gb|EFI02194.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
Length = 653
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/654 (48%), Positives = 442/654 (67%), Gaps = 29/654 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+R+G Y Q+Y GKP+ + V V D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGVSDITGTRQQFWPDDT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQ 299
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + + +E F++ GL E+V+
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVR 240
Query: 300 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 FIESSREHLINDVIYLNSEKQGIPIEIAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFR 299
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 RALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVM 359
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGK
Sbjct: 360 GAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGK 419
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++E
Sbjct: 420 LADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDE 479
Query: 539 IQNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
I+N+ ALG+ + ED KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 IRNIYTALGVTIGTEDDSKEANIEKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQII 539
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS---NALYSIQRFKGLGEMMPV 651
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM
Sbjct: 540 QNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGLENAVHT-QRYKGLGEMNAQ 598
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 QLWETTMDPDNRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 652
>gi|224024595|ref|ZP_03642961.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
gi|224017817|gb|EEF75829.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
Length = 656
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 320/654 (48%), Positives = 427/654 (65%), Gaps = 34/654 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQ 242
VNALS + V+R G Y Q+Y GKP+ + TC + GTR FWPD
Sbjct: 130 VNALSTHMTTNVFRGGKVYQQEYECGKPLYPVKEVGTC------APGMTGTRQTFWPDGN 183
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQW 300
+FT ++ ++ + R+RELA+LN +TI L + E + + F G++E+V++
Sbjct: 184 IFTVT-EYKYSILQARMRELAYLNKGITITLTDKRVKEEDGSFKQEVFHSEEGVKEFVRF 242
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN+ PL DV+ + GI I+ A+ + + + + + Y N+I TI+GGTH G +
Sbjct: 243 LNSTNTPLIDDVIYLNTEKQGIPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRT 301
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR L ++SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV
Sbjct: 302 ALTRVLKKYAEESKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSG 361
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKL
Sbjct: 362 AVNQAVGEALTYYLEEHPKEAKVIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKL 421
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS PEE E+F+VEGDSAGGSAKQGR R+FQAILPLRGKILNVE+ ++++E+
Sbjct: 422 ADCSSRNPEECELFLVEGDSAGGSAKQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEV 481
Query: 540 QNLIRALGL--GVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
N+I+ALG+ GV G++ K+A LRY+KIII+TDADVDG+HI TL++T FYRY +
Sbjct: 482 NNIIQALGIRFGVDGDEDSKKANIDKLRYYKIIIMTDADVDGSHIDTLIMTLFYRYMPEV 541
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPV 651
G +Y+ PPLYK +GK +YCY D E + + + I QR+KGLGEM P
Sbjct: 542 IQGGHLYIATPPLYKCSKGKISEYCYTDEERQAFMQKYGDGSENGIHTQRYKGLGEMNPE 601
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NPE RMLKQ+ IE+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 602 QLWETTMNPETRMLKQVHIENAAEADYIFSMLMGDDVAPRREFIEKNATYANID 655
>gi|260891935|ref|YP_003238032.1| DNA gyrase subunit B [Ammonifex degensii KC4]
gi|260864076|gb|ACX51182.1| DNA gyrase, B subunit [Ammonifex degensii KC4]
Length = 636
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/650 (51%), Positives = 456/650 (70%), Gaps = 30/650 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E + Y + IQ+LEGLEAVR+RP MYIGSTGPRGLHHLVYE++DN++DEA AG+ +
Sbjct: 3 QEEKEREEYRASSIQILEGLEAVRRRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGFCT 62
Query: 129 NIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
IEV + DNS IP+D+HP + A+E VLT LHAGGKFGG S L
Sbjct: 63 EIEVVIKQDNSVLVKDNGRGIPVDIHPQAGRPAVEVVLTTLHAGGKFGGGGYKVSGG--L 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+SVVNALSE LEV V R+G + Q++ RG+PVT L + DR GT + F P
Sbjct: 121 HGVGVSVVNALSEWLEVEVHREGRIWRQRFERGRPVTDLEA----IGETDRTGTTVHFKP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF--AGGLEEY 297
D Q+F + F + + R+REL+FL P++ I LR E + E+ F GGL ++
Sbjct: 177 DHQIFEEVV-FSQDYLTQRLRELSFLVPEVRIVLRDERTG------EEFVFHHKGGLRDF 229
Query: 298 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V+ LN ++ LH D + + +G+ ++ ALQ+ D Y++++ YAN+IRT+DGGTH G
Sbjct: 230 VRHLNRAREVLHPDPIYLAGEREGMVVEAALQY-HDGYAESIFSYANTIRTVDGGTHEAG 288
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
KA+LTR +N G++ + + + L+GE VREGLT +++V+VP+P+FEGQTKT+LGN +
Sbjct: 289 FKAALTRVVNDYGRRHGIIPE-NFQLAGEDVREGLTAVVAVKVPDPQFEGQTKTKLGNTQ 347
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VR+VV+ V E L + E +P + I+ K+L+A +A AA+RAR+L R+K +L S+SLP
Sbjct: 348 VRRVVESIVGEGLASFFEENPSIARLIVEKALAAARAREAARRARELARRKGLLESTSLP 407
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P ++E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + N
Sbjct: 408 GKLADCSERDPAKTELYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILAN 467
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EEI+ LI A+G G+ GED + +RYHK+II+TDADVDGAHIRTLLLTFF+RY + L +
Sbjct: 468 EEIKALITAIGAGI-GEDLDLKKVRYHKLIIMTDADVDGAHIRTLLLTFFFRYMRPLIEA 526
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ PPLY+V +GK+ Y Y+DAEL+K+ S+ N + +IQR+KGLGEM QLWET
Sbjct: 527 GYVYIAQPPLYRVRKGKESFYAYNDAELEKLLSTLGRNGV-TIQRYKGLGEMNAEQLWET 585
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
T+NPE+R++ Q+ +EDA A+ +FS+LMG +V+ R+E I A V NLD
Sbjct: 586 TMNPEKRVILQVTLEDAVAADELFSTLMGDKVEPRREFISRYARYVRNLD 635
>gi|21281734|ref|NP_644820.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87161454|ref|YP_492727.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88193828|ref|YP_498613.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220216|ref|YP_001331039.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161508271|ref|YP_001573930.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253733834|ref|ZP_04867999.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|258451362|ref|ZP_05699393.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|262049437|ref|ZP_06022309.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|262051893|ref|ZP_06024108.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|282902636|ref|ZP_06310529.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|282918073|ref|ZP_06325823.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282920724|ref|ZP_06328443.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282921295|ref|ZP_06329013.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|283767795|ref|ZP_06340710.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|297209447|ref|ZP_06925845.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300911471|ref|ZP_07128920.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|379013370|ref|YP_005289606.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|379019818|ref|YP_005296480.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|384546274|ref|YP_005735527.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ED133]
gi|387779222|ref|YP_005754020.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|415687298|ref|ZP_11451225.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|416845644|ref|ZP_11906099.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|417648054|ref|ZP_12297884.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|417799292|ref|ZP_12446436.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|417897325|ref|ZP_12541262.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|417899938|ref|ZP_12543838.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|417905250|ref|ZP_12549062.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|418286939|ref|ZP_12899575.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|418318231|ref|ZP_12929640.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|418561814|ref|ZP_13126292.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|418569364|ref|ZP_13133697.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|418577923|ref|ZP_13142021.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|418596805|ref|ZP_13160353.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|418641274|ref|ZP_13203487.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|418648772|ref|ZP_13210809.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|418650154|ref|ZP_13212176.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|418657144|ref|ZP_13218921.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|418658950|ref|ZP_13220646.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|418902289|ref|ZP_13456333.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|418910550|ref|ZP_13464538.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|418927294|ref|ZP_13481184.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|418933015|ref|ZP_13486841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|418949662|ref|ZP_13501899.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|418986990|ref|ZP_13534666.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|419773340|ref|ZP_14299349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|422742288|ref|ZP_16796295.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745337|ref|ZP_16799280.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|440708266|ref|ZP_20888936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|440736072|ref|ZP_20915673.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|448740839|ref|ZP_21722813.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|448744200|ref|ZP_21726100.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
gi|59797750|sp|Q6GD85.3|GYRB_STAAS RecName: Full=DNA gyrase subunit B
gi|59799585|sp|P0A0K7.2|GYRB_STAAW RecName: Full=DNA gyrase subunit B
gi|59799586|sp|P0A0K8.2|GYRB_STAAU RecName: Full=DNA gyrase subunit B
gi|93204588|sp|Q2FKQ1.3|GYRB_STAA3 RecName: Full=DNA gyrase subunit B
gi|296395|emb|CAA50570.1| DNA gyrase [Staphylococcus aureus]
gi|540541|dbj|BAA01369.1| DNA gyrase B [Staphylococcus aureus]
gi|21203169|dbj|BAB93870.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87127428|gb|ABD21942.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201386|gb|ABD29196.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150373016|dbj|BAF66276.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160367080|gb|ABX28051.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253728137|gb|EES96866.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|257860892|gb|EEV83709.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|259160220|gb|EEW45249.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|259162434|gb|EEW47004.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|282315710|gb|EFB46094.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|282318358|gb|EFB48718.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282594132|gb|EFB99120.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282597095|gb|EFC02054.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|283461674|gb|EFC08758.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|296885908|gb|EFH24843.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|298693327|gb|ADI96549.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED133]
gi|300887650|gb|EFK82846.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|315197923|gb|EFU28256.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|320141422|gb|EFW33265.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144405|gb|EFW36170.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|323443267|gb|EGB00884.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|329731718|gb|EGG68078.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|334274194|gb|EGL92521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|341839825|gb|EGS81379.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|341844001|gb|EGS85221.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|341844115|gb|EGS85334.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|344176324|emb|CCC86774.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|359829127|gb|AEV77105.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|365165103|gb|EHM56932.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|365243554|gb|EHM84228.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|371975308|gb|EHO92603.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|371985759|gb|EHP02813.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|374362067|gb|AEZ36172.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|374396606|gb|EHQ67837.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|375019434|gb|EHS12988.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|375025187|gb|EHS18594.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|375028623|gb|EHS21966.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|375031320|gb|EHS24602.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|375036979|gb|EHS30035.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|375378271|gb|EHS81677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|377699805|gb|EHT24151.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|377721002|gb|EHT45147.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|377728364|gb|EHT52466.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|377741004|gb|EHT65000.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|377745642|gb|EHT69618.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|377773189|gb|EHT96935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|383972913|gb|EID88936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|436429839|gb|ELP27203.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|436505158|gb|ELP41103.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|445548370|gb|ELY16622.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|445562477|gb|ELY18648.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
Length = 644
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|326802621|ref|YP_004320439.1| DNA gyrase subunit B [Aerococcus urinae ACS-120-V-Col10a]
gi|326650211|gb|AEA00394.1| DNA gyrase, B subunit [Aerococcus urinae ACS-120-V-Col10a]
Length = 660
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 326/639 (51%), Positives = 422/639 (66%), Gaps = 20/639 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIGSTG GLHHLV+EI+DN++DEA AGYA I++ + +
Sbjct: 31 YNASQIQVLEGLEAVRKRPGMYIGSTGAPGLHHLVWEIVDNSIDEALAGYADKIDIKIES 90
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG SVV
Sbjct: 91 DGSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 148
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L V V+RDG Y Q+YSRG V+ L V D+ GT + F D ++FT
Sbjct: 149 NALSTKLRVEVYRDGKIYQQEYSRGHIVSDLKV----VGESDKTGTVVNFVADPEIFTDT 204
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+D T+ R+RELAFLN L I L ED E +Q Y + GG++EYVQ+LN +K+
Sbjct: 205 TDYDFQTLNKRVRELAFLNKGLHITL--EDRREEDSQEVAYQYEGGIKEYVQYLNENKEI 262
Query: 308 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + V +D I +++A Q+ + Y + +AN+I T +GGTH G+K +LTRT+N
Sbjct: 263 LFEEPVYLEGQMDDIEVEVAFQYTA-GYHSNFMSFANNIHTFEGGTHESGIKTALTRTIN 321
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ +K+KD +LSGE VREGLT I+S+R PNP+FEGQTK +LGN EVR + D+
Sbjct: 322 DYARSQNLLKEKDDNLSGEDVREGLTLIVSIRHPNPQFEGQTKMKLGNSEVRTITDRLFG 381
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
++L ++L P++ I+ K + A KA AAKRAR++ R+KS L S+LPGKLADCSS
Sbjct: 382 QHLEQFLYETPNIARQIVDKGILASKARQAAKRAREMTRKKSGLEISNLPGKLADCSSRV 441
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEE E+FIVEG+SAGGSAK GRDR FQAILP+RGKILNVE+ + NEEI++L A+
Sbjct: 442 PEECELFIVEGNSAGGSAKLGRDRHFQAILPIRGKILNVEKASMDRILANEEIRSLFTAM 501
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK++I+TDADVDGAHIRTLLLT YRY + L D G IY+ VPPL
Sbjct: 502 GTGW-GNDFDVTKARYHKLVIMTDADVDGAHIRTLLLTLIYRYMRPLLDAGYIYIAVPPL 560
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V +GK V Y D EL + ++QR+KGLGEM QLWETT++P QR +
Sbjct: 561 YQVRQGKNVHYVNSDQELNDYMKTLAERPRPAVQRYKGLGEMDAEQLWETTMDPTQRQML 620
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
Q+ ++DA EA+ S LMG V R++ I+N A +D
Sbjct: 621 QVTVDDAQEADRNISMLMGDLVAPRRDFIENNATYATID 659
>gi|418905552|ref|ZP_13459579.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764852|gb|EHT88702.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 644
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHDDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|15922995|ref|NP_370529.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|15925710|ref|NP_373243.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|156978336|ref|YP_001440595.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253316843|ref|ZP_04840056.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253730404|ref|ZP_04864569.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|254663939|ref|ZP_05143411.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793543|ref|ZP_05642522.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|258411151|ref|ZP_05681430.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|258420945|ref|ZP_05683879.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|258438584|ref|ZP_05689807.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|258443960|ref|ZP_05692298.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|258446224|ref|ZP_05694384.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|258449117|ref|ZP_05697223.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|258454405|ref|ZP_05702373.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|269201695|ref|YP_003280964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282894284|ref|ZP_06302514.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|282927755|ref|ZP_06335369.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|295406869|ref|ZP_06816673.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|296275682|ref|ZP_06858189.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MR1]
gi|297245904|ref|ZP_06929766.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|384863401|ref|YP_005748760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|385780303|ref|YP_005756474.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 11819-97]
gi|387149193|ref|YP_005740757.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|415693122|ref|ZP_11454976.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|417652015|ref|ZP_12301771.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|417654048|ref|ZP_12303776.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|417796905|ref|ZP_12444107.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|417801536|ref|ZP_12448624.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|417893975|ref|ZP_12537998.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|417900702|ref|ZP_12544581.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|418314813|ref|ZP_12926279.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|418322452|ref|ZP_12933785.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|418425904|ref|ZP_12998981.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|418428781|ref|ZP_13001761.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|418431669|ref|ZP_13004559.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|418435581|ref|ZP_13007421.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|418438336|ref|ZP_13010107.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|418441285|ref|ZP_13012958.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|418441566|ref|ZP_13013193.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|418447232|ref|ZP_13018689.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|418450330|ref|ZP_13021698.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|418453178|ref|ZP_13024493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|418456115|ref|ZP_13027361.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|418458991|ref|ZP_13030176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567448|ref|ZP_13131812.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|418573938|ref|ZP_13138118.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|418598564|ref|ZP_13162073.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|418640046|ref|ZP_13202282.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|418644043|ref|ZP_13206195.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|418653186|ref|ZP_13215131.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|418661955|ref|ZP_13223515.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|418874096|ref|ZP_13428368.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|418879712|ref|ZP_13433935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|418882673|ref|ZP_13436877.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885320|ref|ZP_13439476.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|418893491|ref|ZP_13447596.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913293|ref|ZP_13467267.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418918779|ref|ZP_13472728.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|418930156|ref|ZP_13484008.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|418989922|ref|ZP_13537586.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|419783663|ref|ZP_14309446.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|421148834|ref|ZP_15608493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424769522|ref|ZP_18196748.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|443636287|ref|ZP_21120402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443638069|ref|ZP_21122126.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
gi|54037243|sp|P66937.2|GYRB_STAAN RecName: Full=DNA gyrase subunit B
gi|54041556|sp|P66936.2|GYRB_STAAM RecName: Full=DNA gyrase subunit B
gi|13699922|dbj|BAB41221.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|14245772|dbj|BAB56167.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|156720471|dbj|BAF76888.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253725884|gb|EES94613.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257787515|gb|EEV25855.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|257840036|gb|EEV64501.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|257843135|gb|EEV67550.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|257848143|gb|EEV72135.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|257850844|gb|EEV74788.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|257855050|gb|EEV77993.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|257857550|gb|EEV80445.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|257863499|gb|EEV86259.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|262073985|gb|ACY09958.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282590515|gb|EFB95593.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|282763329|gb|EFC03459.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|285815732|gb|ADC36219.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|294968334|gb|EFG44359.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|297177269|gb|EFH36522.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|312828568|emb|CBX33410.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129548|gb|EFT85540.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|329725845|gb|EGG62324.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|329732607|gb|EGG68957.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|334267943|gb|EGL86394.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|334276580|gb|EGL94834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|341847016|gb|EGS88202.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|341853482|gb|EGS94363.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|364521292|gb|AEW64042.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
11819-97]
gi|365223481|gb|EHM64770.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|365244416|gb|EHM85075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|371980639|gb|EHO97841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|371982093|gb|EHO99253.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|374399341|gb|EHQ70482.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|375015446|gb|EHS09101.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|375019491|gb|EHS13044.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|375027023|gb|EHS20400.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|375037444|gb|EHS30478.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|377701338|gb|EHT25671.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|377718582|gb|EHT42754.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|377719156|gb|EHT43327.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|377726373|gb|EHT50485.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|377729262|gb|EHT53358.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|377734873|gb|EHT58910.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|377759336|gb|EHT83217.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769065|gb|EHT92843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|377773604|gb|EHT97349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|383364751|gb|EID42057.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|387714926|gb|EIK03037.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|387715095|gb|EIK03201.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|387715280|gb|EIK03383.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|387722714|gb|EIK10500.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|387724428|gb|EIK12085.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|387726669|gb|EIK14217.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|387732608|gb|EIK19823.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|387733965|gb|EIK21123.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|387740837|gb|EIK27760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|387741252|gb|EIK28109.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|387741729|gb|EIK28562.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|387742964|gb|EIK29766.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|394330936|gb|EJE57024.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402348167|gb|EJU83162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|408422576|emb|CCJ09987.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408424564|emb|CCJ11951.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408426553|emb|CCJ13916.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408428541|emb|CCJ25706.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408430530|emb|CCJ17845.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408432523|emb|CCJ19808.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408434512|emb|CCJ21772.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408436497|emb|CCJ23740.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|443408203|gb|ELS66731.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443410042|gb|ELS68521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
Length = 644
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|260890953|ref|ZP_05902216.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
gi|260859506|gb|EEX74006.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
Length = 660
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 325/668 (48%), Positives = 436/668 (65%), Gaps = 44/668 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+E I VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDEA AG I V
Sbjct: 1 MDNNYGAEAITVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSVDEALAGICDKITV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L N IP+ +H T KS LE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 KILEGNIIEVSDNGRGIPVGMHK-TGKSTLEVVLTVLHAGGKF--DNDNYKVSGGLHGVG 117
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE LE TV RDG + Q Y RG P T + V GT +RF D ++
Sbjct: 118 VSVVNALSEWLEATVTRDGKIFRQTYERGVP--TSPVEEIGVADDGTHGTVVRFKADDEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T + +D++ + R++ELA+LN L I L E + E + E+ F GG+++++ +
Sbjct: 176 FETTV-YDYSVLESRLKELAYLNKGLKIELADE-RNAENVKAEEFLFEGGIKDFLNEIID 233
Query: 304 DKKPLHDVVGFR-------------KDVDG-----------ITIDLALQWCSDAYSDTML 339
++K + DV+ +D +G + +++A+ + + + +T+
Sbjct: 234 EEKIIDDVIYMADTMQIEEAKEVEAEDENGNTVIKQRGAKFVEVEIAMNYTT-SQRETVY 292
Query: 340 GYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRV 399
+ N+I T +GGTH+ G + +LTRT+N + K+ +KDK+ + G VREGL C+ISV++
Sbjct: 293 SFVNNINTHEGGTHVSGFRTALTRTINDIAKQMNLIKDKNGTFQGTDVREGLVCVISVKI 352
Query: 400 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKR 459
P P+FEGQTKT+LGN EV +V V L YLE HP + I+ K + +A AAK+
Sbjct: 353 PEPQFEGQTKTKLGNSEVTGIVSNIVGSNLKFYLEDHPKAAEKIIEKMAMSKRAREAAKK 412
Query: 460 ARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLR 519
AR+LV +K+ L SLPGKLADCSS P ESEIFIVEG+SAGGSAKQGRDRRFQAILPLR
Sbjct: 413 ARELVLRKNTLEVGSLPGKLADCSSKDPAESEIFIVEGNSAGGSAKQGRDRRFQAILPLR 472
Query: 520 GKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIR 579
GKILNVE+ +N EI+ +I A G G GE+ + LRYHKI+I+TDADVDGAHIR
Sbjct: 473 GKILNVEKSGVHKALENAEIRAMITAFGAGF-GEEMDLKKLRYHKIVIMTDADVDGAHIR 531
Query: 580 TLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YS 638
TL+LTFFYR+ + L +EG IY+ PPLYK++ GK ++Y Y D ++K+V Y+
Sbjct: 532 TLMLTFFYRHLRELINEGYIYIAQPPLYKIQAGKAIRYAYSDDQMKQVTRVLEGEGRKYT 591
Query: 639 IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNA 698
IQR+KGLGEM P QLWETTL+PE R L ++ +EDA+ A+ +F+ LMG +V+ R++ I++
Sbjct: 592 IQRYKGLGEMNPEQLWETTLDPEVRTLLKVSMEDASYADKMFNILMGDKVEPRRKFIEDN 651
Query: 699 ANLV-NLD 705
AN V NLD
Sbjct: 652 ANYVRNLD 659
>gi|313887747|ref|ZP_07821429.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846356|gb|EFR33735.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 637
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/646 (50%), Positives = 450/646 (69%), Gaps = 27/646 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEI+DN++DEA AG +I + +
Sbjct: 6 RHYDASDIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAGICDHIIIKI 65
Query: 135 -------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+ DN IP+D+HP T KS +ETVLT+LHAGGKF +S Y VSGGLHGVG+S
Sbjct: 66 NKNGSVEITDNGSGIPVDIHPQTGKSTVETVLTILHAGGKF--DNSAYKVSGGLHGVGVS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L TV R+G Y Q+++RG + L V+ + D GT I F PD +F
Sbjct: 124 VVNALSNKLVATVKRNGKIYRQEFARGIRKSDL--EVIGETNTDETGTTIYFEPDDTIFE 181
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 304
T ++F +A R RE+AFLN + I E D NE F + GG++ +V+++N
Sbjct: 182 T-VEFSDEVLAKRFREMAFLNKGIKIEFIDERKD-----LNEVFHYEGGIKSFVEFINAK 235
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
KKP+HD + + ++ + +++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +++LTR
Sbjct: 236 KKPVHDEIIYIDEIREETAVEIAIQY-TDSYSEVVLSFANNINTEEGGTHLSGFRSALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN G+K+ +K+K+ +LSGE VREG++ +ISV++P+P+FEGQTK +LGN E R +VD
Sbjct: 295 TLNDYGRKNNIIKEKEENLSGEDVREGISAVISVKLPDPQFEGQTKGKLGNSETRGIVDS 354
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ E L +LE +P V IL K+LSA +A AA++ARDL R+K+ L S +LPGKLADC
Sbjct: 355 VLSEDLAVFLEENPRVGKQILDKALSARRAREAARKARDLTRKKNNLESMTLPGKLADCQ 414
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ P+ +EIF+VEG+SAGGSAK GRD +QAILPLRGKI+NVE+ M + EI+ +I
Sbjct: 415 NDDPKRNEIFLVEGNSAGGSAKDGRDSAYQAILPLRGKIMNVEKARLDRMLNSSEIRAMI 474
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE+F E LRY KIII+TDADVDGAHI TLLLTFF+RY K L +EG +YV
Sbjct: 475 TAFGTGI-GEEFDLEKLRYDKIIIMTDADVDGAHIMTLLLTFFFRYMKPLIEEGHVYVAQ 533
Query: 604 PPLYKVERGKQV-QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PLY +E+G ++ +YC+++ EL+ + + + +I+R+KGLGEM P QLWETT+NP+
Sbjct: 534 APLYGIEKGTKILRYCHNEKELRLALKEYKDSKV-NIKRYKGLGEMDPEQLWETTMNPDN 592
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 708
R+L ++ I+D AEA+ FS LMG V+ R++ I N V D++D
Sbjct: 593 RLLLKVNIDDLAEADDTFSILMGTEVEPRRDFI--TENAVYADYID 636
>gi|49484917|ref|YP_042138.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|386829730|ref|YP_006236384.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|49243360|emb|CAG41777.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|385195122|emb|CCG14722.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 643
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 10 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 69
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 70 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 128 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 184 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 601 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|169351628|ref|ZP_02868566.1| hypothetical protein CLOSPI_02409 [Clostridium spiroforme DSM 1552]
gi|169291850|gb|EDS73983.1| DNA gyrase, B subunit [Clostridium spiroforme DSM 1552]
Length = 641
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 327/648 (50%), Positives = 436/648 (67%), Gaps = 22/648 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +Y IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AGYAS+
Sbjct: 3 EEKVKHSYDESDIQVLEGLEAVRKRPGMYIGTTSIRGLHHLVWEIVDNSIDEALAGYASH 62
Query: 130 IEVAL---------LADNSIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V L +P H T S +ET+ TVLHAGGKFGG S LH
Sbjct: 63 IRVILKDDDVVQVIDDGRGMPTGTHAKTGISTVETIFTVLHAGGKFGGGGYKVSGG--LH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWP 239
GVG SVVNALSE LEV V RDG Y+Q++ G +PV L V D GT + F
Sbjct: 121 GVGASVVNALSEWLEVNVHRDGHVYYQRFENGGQPVDKLKV----VGDSDITGTIVTFKA 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
DK +F +D++T+ RIRELAFLN L ++L ED N+ Y + GG++EYV
Sbjct: 177 DKLIFKEGTVYDYDTLNQRIRELAFLNKGLRLSL--EDQRNGINRKQVYHYEGGIKEYVS 234
Query: 300 WLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K P+H+ + + +D+ ITI++A+Q+ +D Y + + N+I T +GGTH EG +
Sbjct: 235 FINKNKTPIHEEIIYVEDIQQDITIEVAMQY-NDGYQSNIYSFCNNINTHEGGTHEEGFR 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR +N+ K +K D +LSG+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 294 MALTRVINNYAKNKGLLKKDDETLSGDDVREGLTAIISVKHPDPQYEGQTKTKLGNAEVR 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
K+ + L ++L +PD I+ K++ A +A +AAK+AR++ R+K+ L S+LPGK
Sbjct: 354 KIASNIIATSLDKFLLENPDTAKIIVDKAIIASRARMAAKKAREMTRRKNPLEVSNLPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS P E EIFIVEGDSAGGSAK GRDRR QAILPLRGKILNVE+ + N E
Sbjct: 414 LADCSSKDPSECEIFIVEGDSAGGSAKMGRDRRIQAILPLRGKILNVEKSRLEKILGNAE 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+++I A G G+ GE+F + LRYHKI+I+TDADVDG HIR L+LTF YRY K L + G
Sbjct: 474 IRSMITAFGTGI-GEEFNLDKLRYHKIVIMTDADVDGGHIRILMLTFLYRYLKPLIENGF 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY ++ GK+ YCY D EL+ +K+ S A YSIQR+KGLGEM QLWETT+
Sbjct: 533 VYAAQPPLYLLKHGKEEHYCYSDEELEDLKTKIGSGAKYSIQRYKGLGEMNADQLWETTM 592
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+P++R+L Q+ +++A EA+++F LMG +V+ R+E IQ NA + +LD
Sbjct: 593 DPQKRILNQIDLDEAMEADMIFDMLMGEKVEPRREFIQENAKYVTDLD 640
>gi|148266452|ref|YP_001245395.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|150392485|ref|YP_001315160.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH1]
gi|418876920|ref|ZP_13431162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
gi|147739521|gb|ABQ47819.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|149944937|gb|ABR50873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH1]
gi|377699237|gb|EHT23584.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
Length = 640
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|49482258|ref|YP_039482.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
gi|49240387|emb|CAG39033.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
Length = 643
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 10 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 69
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 70 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 128 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 184 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 242
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 601 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|221141520|ref|ZP_03566013.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|257424201|ref|ZP_05600630.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426878|ref|ZP_05603280.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429514|ref|ZP_05605901.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432161|ref|ZP_05608524.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435122|ref|ZP_05611173.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|258423233|ref|ZP_05686125.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|282907052|ref|ZP_06314900.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910031|ref|ZP_06317839.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912279|ref|ZP_06320075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282912919|ref|ZP_06320711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282922547|ref|ZP_06330237.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|283959489|ref|ZP_06376930.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293511562|ref|ZP_06670256.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|293550171|ref|ZP_06672843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|295429302|ref|ZP_06821924.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589196|ref|ZP_06947837.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|304379953|ref|ZP_07362682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|384860687|ref|YP_005743407.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384866349|ref|YP_005746545.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
TCH60]
gi|384868593|ref|YP_005751307.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|387141643|ref|YP_005730036.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|415683078|ref|ZP_11448344.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|417888971|ref|ZP_12533071.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|417890994|ref|ZP_12535061.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|418281330|ref|ZP_12894143.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|418281879|ref|ZP_12894677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|418307216|ref|ZP_12918941.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|418559586|ref|ZP_13124125.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|418565294|ref|ZP_13129704.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|418580682|ref|ZP_13144768.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|418601048|ref|ZP_13164494.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|418872309|ref|ZP_13426653.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|418887938|ref|ZP_13442077.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|418890522|ref|ZP_13444647.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896380|ref|ZP_13450457.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418899314|ref|ZP_13453378.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|418907689|ref|ZP_13461707.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|418915846|ref|ZP_13469811.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|418921590|ref|ZP_13475514.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|418947149|ref|ZP_13499537.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|418981974|ref|ZP_13529684.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|418992735|ref|ZP_13540377.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|424786730|ref|ZP_18213514.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
gi|59797755|sp|Q6GKU0.3|GYRB_STAAR RecName: Full=DNA gyrase subunit B
gi|257273219|gb|EEV05321.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276509|gb|EEV07960.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279995|gb|EEV10582.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283040|gb|EEV13172.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285718|gb|EEV15834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|257846562|gb|EEV70584.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|269939531|emb|CBI47889.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|282314768|gb|EFB45154.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|282323019|gb|EFB53338.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282323975|gb|EFB54291.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326097|gb|EFB56402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329951|gb|EFB59472.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|283789081|gb|EFC27908.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919218|gb|EFD96294.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|291465520|gb|EFF08052.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|295127061|gb|EFG56705.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577707|gb|EFH96420.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|302749916|gb|ADL64093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304341533|gb|EFM07443.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312436854|gb|ADQ75925.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH60]
gi|315195231|gb|EFU25619.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|329312728|gb|AEB87141.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|341852861|gb|EGS93744.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|341853903|gb|EGS94782.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|365165431|gb|EHM57218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|365172167|gb|EHM62897.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|365245785|gb|EHM86389.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|371974449|gb|EHO91781.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|371974764|gb|EHO92081.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|374400039|gb|EHQ71162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|375367363|gb|EHS71326.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|375376834|gb|EHS80348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|377705406|gb|EHT29711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708099|gb|EHT32391.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|377713874|gb|EHT38082.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|377735389|gb|EHT59422.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|377737693|gb|EHT61703.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|377748742|gb|EHT72698.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|377753673|gb|EHT77590.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|377756551|gb|EHT80448.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|377760519|gb|EHT84398.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|377763107|gb|EHT86964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|421955106|gb|EKU07449.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
Length = 644
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|416840825|ref|ZP_11903999.1| DNA gyrase subunit B [Staphylococcus aureus O11]
gi|323439694|gb|EGA97412.1| DNA gyrase subunit B [Staphylococcus aureus O11]
Length = 644
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEYR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|284023042|ref|ZP_06377440.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 132]
Length = 644
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQVLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|242372598|ref|ZP_04818172.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
gi|242349653|gb|EES41254.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
Length = 643
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 432/642 (67%), Gaps = 20/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V+R+ YHQ Y +G P L + D+ GT IRF D +F
Sbjct: 129 SVVNALSQDLEVYVYRNETIYHQAYKKGVPQFDLK----EIGETDQTGTAIRFKADGDIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E E+ + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDERE--EEVREDSYHYEGGIKSYVELLNEN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H + + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPIHQEPIYIHQTKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G +SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ESEIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 422 SKNPDESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 482 TAFGTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ +SI R+KGLGEM QLWETT+NPE R
Sbjct: 541 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ +EDA +A+ F LMG V+ R++ I++ A NLD
Sbjct: 601 SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLD 642
>gi|169823702|ref|YP_001691313.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
gi|167830507|dbj|BAG07423.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
Length = 638
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 327/647 (50%), Positives = 447/647 (69%), Gaps = 28/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L V RDG Y Q++ +GK VT LT V GT I F PD +F
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTVVKENVRG---TGTTIEFMPDDTIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T + FD N +A R RE+AFLN + I E SD E++ Y E F + GG++ +V+++N
Sbjct: 179 ET-LNFDKNVLAKRFREMAFLNKGVKI----EFSD-ERDGYKELFHYEGGIKSFVEYINK 232
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LT
Sbjct: 233 SKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD
Sbjct: 292 RALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC
Sbjct: 352 SVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ E +EIF+VEGDSAGGSAK GRD +FQAILPLRGKILNVE+ + +EEI+ +
Sbjct: 412 QSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F LRY KI+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+
Sbjct: 472 ITAFGTGI-GKNFDISKLRYGKIVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIA 530
Query: 603 VPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY + +G K ++YCY + EL++ + + +QR+KGLGEM QLW+TT+NPE
Sbjct: 531 QPPLYGIIKGVKVMEYCYTEQELEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPE 590
Query: 662 QRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ I ED E + F LMG V+ R+E I QNA N+D
Sbjct: 591 HRILIKVEIDGEDENELDNTFDVLMGDNVEPRREFIEQNAVYAQNID 637
>gi|386727827|ref|YP_006194210.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
gi|387601296|ref|YP_005732817.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|418309629|ref|ZP_12921181.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|418980540|ref|ZP_13528319.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|283469234|emb|CAQ48445.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|365238435|gb|EHM79271.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|379991710|gb|EIA13176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|384229120|gb|AFH68367.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
Length = 644
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D +F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGDIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|237720397|ref|ZP_04550878.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262405441|ref|ZP_06081991.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|294646223|ref|ZP_06723877.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|298480563|ref|ZP_06998760.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|336404477|ref|ZP_08585172.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|345510630|ref|ZP_08790194.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|423214870|ref|ZP_17201398.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
gi|229442648|gb|EEO48439.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|229450148|gb|EEO55939.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262356316|gb|EEZ05406.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|292638441|gb|EFF56805.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|295086258|emb|CBK67781.1| DNA gyrase subunit B [Bacteroides xylanisolvens XB1A]
gi|298273384|gb|EFI14948.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|335942274|gb|EGN04121.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|392692133|gb|EIY85371.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
Length = 652
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/653 (48%), Positives = 440/653 (67%), Gaps = 28/653 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDGT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++EI
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + ++ KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQVIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM Q
Sbjct: 540 NGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 LWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|410458121|ref|ZP_11311884.1| DNA gyrase subunit B [Bacillus azotoformans LMG 9581]
gi|409931749|gb|EKN68725.1| DNA gyrase subunit B [Bacillus azotoformans LMG 9581]
Length = 641
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 335/649 (51%), Positives = 439/649 (67%), Gaps = 24/649 (3%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
K+ V +Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 KQTVVETSYDANQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCT 63
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I+V + ADNSI P+ + + A+E ++TVLHAGGKFGG S L
Sbjct: 64 EIKVTIEADNSITVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--L 121
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG SVVNALS LEV V DG ++ K+ RG V L + D+ GT + F P
Sbjct: 122 HGVGASVVNALSTELEVFVHLDGKIHYIKFERGAVVEELKV----IGETDKTGTIVHFSP 177
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE-KNQYNEYFFAGGLEEYV 298
D ++F ++++ +A R+RELAFLN L + + ED PE K Q+ + + GG+ YV
Sbjct: 178 DPEIFQETTVYEYDVLATRLRELAFLNRGLNLII--EDKRPEGKTQH--WCYEGGIISYV 233
Query: 299 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
+ LN ++ +H+ V + DGIT ++ALQ+ +D+Y + +AN+I T +GGTH G
Sbjct: 234 EHLNRSREVIHEEPVYVMGEKDGITAEVALQY-NDSYVSNIYSFANNIHTYEGGTHEVGF 292
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K +LTR +N +KS K+ D +L+G+ VREGLT IISV+ P+P+FEGQTKT+LGN EV
Sbjct: 293 KTALTRVINDYARKSGMFKENDPNLTGDDVREGLTTIISVKHPDPQFEGQTKTKLGNSEV 352
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
R +VD E L ++L +P V I+ K L A +A +AAK+AR+L R+K L SSLPG
Sbjct: 353 RAIVDSVFSEQLDKFLMENPSVGKKIVEKGLMASRARIAAKKARELTRRKGALEISSLPG 412
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS SE++IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N
Sbjct: 413 KLADCSSKDASISELYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILSNN 472
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+ +I ALG G+ GEDF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ K + + G
Sbjct: 473 EIRTIITALGTGI-GEDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMKPIIENG 531
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPLYKV++GK+V Y Y+D EL+ V + P N S+QR+KGLGEM P QLWETT
Sbjct: 532 YIYIAQPPLYKVQQGKKVIYAYNDRELEAVLAELPDNPKPSLQRYKGLGEMNPEQLWETT 591
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++PE R L Q+ ++DA EA+ VF LMG +V+ R+E IQ NA + NLD
Sbjct: 592 MDPEVRTLLQVQLQDAMEADEVFEILMGDQVEPRREFIQENARYVKNLD 640
>gi|418953131|ref|ZP_13505137.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|418984497|ref|ZP_13532192.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
gi|375375648|gb|EHS79218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|377710096|gb|EHT34348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
Length = 640
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|308066844|ref|YP_003868449.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
gi|305856123|gb|ADM67911.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
Length = 636
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 329/644 (51%), Positives = 441/644 (68%), Gaps = 29/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY +I+V +
Sbjct: 7 SYDAGEIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVH 66
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+ H KSALE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 67 EDNSVTVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P V + D GT+ F+PD Q+FT
Sbjct: 125 VNALSSKMIVHVKRDGHLYEQEYHRGAP----QYDVRVIGDTDETGTQTTFYPDDQIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 181 TTVYDYDTLQTRIRELAFLNKGIAISL----TDERTGASDTFHYEGGISEYVQFLNQKRE 236
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 237 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 292
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +KD + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 293 RIINDYARKNGLIKDNNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 352
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 353 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 412
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + ++EI+++
Sbjct: 413 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSM 472
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
+ A+G G+ G+DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + D G IY+
Sbjct: 473 VTAMGTGI-GDDFDIAKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIA 531
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+KVER K V+Y +AE ++ F NA Y++QR+KGLGEM QLWETT++PE
Sbjct: 532 QPPLFKVERNKVVRYANSEAERDEIIREFGENAKYNVQRYKGLGEMNATQLWETTMDPES 591
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ + DA A+ +F++LMG V+ R++ IQ A V NLD
Sbjct: 592 RTMLQVTVSDAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLD 635
>gi|329767180|ref|ZP_08258707.1| DNA gyrase subunit B [Gemella haemolysans M341]
gi|328836847|gb|EGF86494.1| DNA gyrase subunit B [Gemella haemolysans M341]
Length = 638
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/639 (49%), Positives = 441/639 (69%), Gaps = 21/639 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
Y ++QIQVLEGLEAVR RP MYIGST +GLHHLV+EI+DN++DEA AGY I VA+
Sbjct: 10 YNADQIQVLEGLEAVRVRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCDTITVAIEK 69
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ DN IP+D+ T K ALE +LTVLHAGGKFGG S LHGVG SVV
Sbjct: 70 GNWIRVEDNGRGIPVDIQEQTGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +LE +V RDG + K+ RG V +T V + DR GT IRF D ++F
Sbjct: 128 NALSTNLEASVHRDGKIHTMKFERGDVVQGITV----VGNTDRTGTTIRFKADPEIFQET 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+D++ + RIRELAFLN +TI L+ E EK + +++ GGL EYV+ LN +K
Sbjct: 184 TVYDYDILRTRIRELAFLNKGITIILKDEREGQEKEE--TFYYEGGLLEYVEMLNENKDA 241
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + ++DG +++++Q+ + YS +L YAN+I T +GGTH G K +LTR +NS
Sbjct: 242 LHEAIYVHGEMDGKEVEISMQYNT-GYSSNVLSYANNINTHEGGTHESGFKTALTRIINS 300
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
GKK+K +KDK+ SL+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E
Sbjct: 301 YGKKNKLIKDKE-SLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSE 359
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
L +L +P + I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS
Sbjct: 360 ELDRFLLENPKIAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDA 419
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
E E+F+VEGDSAGGSAK GR+ +FQAILPL+GKILNVE+ + N+E+++LI A+G
Sbjct: 420 AECELFLVEGDSAGGSAKLGRNSKFQAILPLKGKILNVEKVRIDKVLANDEVRSLITAIG 479
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
+G+ GE + LRYHKI+I+TDADVDG+HIRTLLLTFF+RY + L DEG +Y+ PPLY
Sbjct: 480 MGI-GETLNIDKLRYHKIVIMTDADVDGSHIRTLLLTFFFRYMRELIDEGYVYIARPPLY 538
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
++ GK+ YC+ + ELK+ + Y++QR+KGLGEM +LW+TT++PE R++ Q
Sbjct: 539 GLKVGKKEFYCHTEEELKQNIEEHAGDKKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYQ 598
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ I+DA A+ F +LMG +V+ R++ I+ NA N++NLD
Sbjct: 599 VSIDDAQRADAAFDTLMGEKVEPRRKFIEDNALNVINLD 637
>gi|384548928|ref|YP_005738180.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302331777|gb|ADL21970.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 644
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEK 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|383111025|ref|ZP_09931843.1| DNA gyrase, B subunit [Bacteroides sp. D2]
gi|313694595|gb|EFS31430.1| DNA gyrase, B subunit [Bacteroides sp. D2]
Length = 652
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/653 (48%), Positives = 435/653 (66%), Gaps = 28/653 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+RDG Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDNT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I L E + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRITLTDRRVVNEDGSFKGEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++EI
Sbjct: 420 ADCSDKDATKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + E+ KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTEEDSKEANIQKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM Q
Sbjct: 540 NGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAVHT-QRYKGLGEMNAQQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 LWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|300862234|ref|ZP_07108314.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|428765686|ref|YP_007151797.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
gi|300848759|gb|EFK76516.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|427183859|emb|CCO71083.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
Length = 649
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 438/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + IT+++++Q+ +D Y +L +AN+I T +GGTH G K SLTR
Sbjct: 244 KDVIFPEPVFIEGEQQDITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKTSLTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSLF 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G +Y+
Sbjct: 483 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QLWETT++
Sbjct: 542 PPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMD 601
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 602 PEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|410666391|ref|YP_006918762.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
gi|409104138|gb|AFV10263.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
Length = 642
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 320/642 (49%), Positives = 444/642 (69%), Gaps = 25/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + QI+VLEG+EAVR+RP MYIG+TG RGLH LV+E++DN+VDE AGY IE+ L
Sbjct: 14 RDYDAAQIEVLEGMEAVRRRPGMYIGNTGARGLHQLVFELIDNSVDEHLAGYCDLIEITL 73
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D+HP T + A+E LT+LHAGGKFGG+ GY +SGGLHGVGLS
Sbjct: 74 HRDGSVTVRDNGRGIPVDIHPRTGRPAVEAALTMLHAGGKFGGN--GYEISGGLHGVGLS 131
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V V RDG Y Q+Y RG+ + L + + GT +RF PD Q+F+
Sbjct: 132 VVNALSRWLLVEVRRDGRRYQQRYERGQVKSPLK----DAGAAEGTGTTVRFLPDGQIFS 187
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+F+ I R+R+L++LN L L D E++ GG+ ++V+ LN +K
Sbjct: 188 ER-KFNREYITARVRDLSYLNKGLRFVL----VDEVTGDRQEFYHEGGIADFVRSLNKNK 242
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH D + F DG+ I++ALQ+ + Y++ + Y N+I T +GGTH G KA+LTR
Sbjct: 243 EVLHQDPLYFSDKKDGVVIEVALQYHT-GYTEGIYSYVNNIHTQEGGTHEAGFKAALTRI 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N KKS +K+ LSGE REGLT ++SV++ P+FEGQTKT+LGN EVR +V+
Sbjct: 302 INDYAKKSGYLKENMEKLSGEDTREGLTAVLSVKLKEPQFEGQTKTKLGNSEVRGIVESV 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E+L E+ E +P I+ K++ A +A AA++AR+L R+K+ L SLPGKLADC+S
Sbjct: 362 VSEHLEEFFEENPGPSKLIVEKAVQAARAREAARKARELTRRKTALDHISLPGKLADCTS 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E E++IVEGDSAGGSAKQGRDRRFQAILPLRGKI+N E+ M NEEI+++I
Sbjct: 422 KDPRECELYIVEGDSAGGSAKQGRDRRFQAILPLRGKIINAEKARLDKMLSNEEIKSIIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ +DF + RYH+III++DADVDG+HIRTLLLTFFYRY + L + G +Y+ P
Sbjct: 482 AVGTGIL-DDFDLKKARYHRIIIMSDADVDGSHIRTLLLTFFYRYMRPLIEAGYVYIAQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV++GK+++Y Y D EL+K+ ++ ++ + +IQR+KGLGEM P QLWETT++PE+R
Sbjct: 541 PLYKVQKGKRIEYAYSDRELEKLLRNWKTDNV-TIQRYKGLGEMNPEQLWETTMDPERRT 599
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ + DA A+ +F+ LMG +V+ R+E IQ +A ++ NLD
Sbjct: 600 MLQVTLTDAMLADEIFTILMGEKVEPRREFIQAHARDVRNLD 641
>gi|404477339|ref|YP_006708769.1| DNA gyrase subunit B [Staphylococcus aureus 08BA02176]
gi|404438828|gb|AFR72021.1| DNA gyrase subunit B [Staphylococcus aureus 08BA02176]
Length = 640
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 334/642 (52%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D +F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGDIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 239
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 418
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 419 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 478
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 479 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 537
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 538 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 597
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 598 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|320159847|ref|YP_004173071.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
gi|319993700|dbj|BAJ62471.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
Length = 639
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/647 (49%), Positives = 441/647 (68%), Gaps = 25/647 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV+ +YG++ IQVLEGLEAVR+RP MY+G T + LHHLVYE++DN++DEA AG +I+
Sbjct: 4 PVNTSYGAKDIQVLEGLEAVRRRPGMYVGGTDLKALHHLVYEVVDNSIDEALAGACDHIQ 63
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + D+S IP+D+HP KSALE V+TVLHAGGKFG S Y VSGGLHGV
Sbjct: 64 VTIHPDSSVTVEDNGRGIPVDIHPEKQKSALEVVMTVLHAGGKFGSGS--YKVSGGLHGV 121
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALSE EV V RDG + Q+Y RG PV + V+ + GT+ F D
Sbjct: 122 GVSAVNALSEWCEVEVRRDGKVHFQRYERGVPVEPV--KVIGKCKPNETGTKTTFRFDPT 179
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F + + +T+ R RE+AF+ K+TI L E + E + ++F GG+ +V++LN
Sbjct: 180 IFKGDLDYKFDTLVQRFREMAFVTRKVTIRLIDERASREMS----FYFEGGITSFVRYLN 235
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+++ LH VV K+V+G+ I+ A+Q+ +DAY++++ +AN+I TIDGGTH+ G++A++T
Sbjct: 236 RNREVLHPVVYAEKEVEGVGIEAAIQY-TDAYAESVYSFANTINTIDGGTHLTGLRAAIT 294
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +++ +KD D + SG+ REGLT I+SV+ P+P+FE QTK +L NPEV+ V
Sbjct: 295 RVINDYARRNNFLKDGDPNFSGDDTREGLTAIVSVKHPDPQFESQTKVKLMNPEVQTYVQ 354
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
Q V E + +LE +P +I+ K L++ +A AA++ARDLV +KS L S +LPGKLADC
Sbjct: 355 QVVGEAFSTFLEENPQAAKAIIQKCLTSARARDAARKARDLVIRKSTLESLTLPGKLADC 414
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P ++E++IVEGDSAGGSAKQGRDR FQA+LPLRGKILN ER + N E++ L
Sbjct: 415 SERDPSKTELYIVEGDSAGGSAKQGRDRHFQAVLPLRGKILNTERARLDKILSNNEVKAL 474
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G+ G+ F LRY ++II+TDADVDG+HIRTLLLTFF+RY L ++G +++
Sbjct: 475 ISALGTGI-GDSFDLSGLRYGRVIIMTDADVDGSHIRTLLLTFFFRYMLPLIEDGHLFIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY++ QV+Y Y DA+ ++ P A SIQR+KGLGEM P QLWETT+N
Sbjct: 534 QPPLYRIAYKNQVRYAYTDADRDRILKELGITPEKA--SIQRYKGLGEMNPTQLWETTMN 591
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R L + +EDAA A+ F LMGA V R + IQ +A ++ NLD
Sbjct: 592 PENRTLLMVTVEDAAAADRTFDMLMGAAVPPRTKFIQTHARDVRNLD 638
>gi|375311491|ref|ZP_09776746.1| DNA gyrase subunit b [Paenibacillus sp. Aloe-11]
gi|375076671|gb|EHS54924.1| DNA gyrase subunit b [Paenibacillus sp. Aloe-11]
Length = 634
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 328/644 (50%), Positives = 443/644 (68%), Gaps = 29/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY ++I+V +
Sbjct: 5 SYDASEIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVWEVVDNSIDEALAGYCNSIQVIVH 64
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ H KSALE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 65 TDNSITVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 122
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P V + D GT+ F+PD+Q+FT
Sbjct: 123 VNALSSKVIVHVKRDGHVYEQEYHRGVP----QYDVRVIGDTDETGTQTTFYPDEQIFTE 178
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 179 TTVYDYDTLQTRIRELAFLNKGIAISL----TDERTGASDTFHYEGGISEYVQFLNQQRE 234
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 235 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +KD + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 291 RIINDYARKNGLIKDSNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 351 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + ++EI+++
Sbjct: 411 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSM 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
+ A+G G+ G+DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + D G +Y+
Sbjct: 471 VTAMGTGI-GDDFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKILDAGYVYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+KVER K ++Y +AE ++ F NA Y++QR+KGLGEM QLWETT++PE
Sbjct: 530 QPPLFKVERNKVIRYANSEAERDEIIREFGENAKYNVQRYKGLGEMNAAQLWETTMDPES 589
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ I DA A+ +F++LMG V+ R++ IQ A V NLD
Sbjct: 590 RTMLQVTINDAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLD 633
>gi|57651113|ref|YP_184916.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL]
gi|81859679|sp|Q5HJZ1.3|GYRB_STAAC RecName: Full=DNA gyrase subunit B
gi|57285299|gb|AAW37393.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL]
Length = 644
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEA RKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAARKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|255971553|ref|ZP_05422139.1| DNA gyrase subunit B [Enterococcus faecalis T1]
gi|255962571|gb|EET95047.1| DNA gyrase subunit B [Enterococcus faecalis T1]
Length = 649
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/651 (49%), Positives = 442/651 (67%), Gaps = 33/651 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 305 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 244 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-ADGYHSNILSFANNIHTYEGGTHESGFKT 298
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 299 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 358
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 359 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 418
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI
Sbjct: 419 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEI 478
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G +
Sbjct: 479 RSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYV 537
Query: 600 YVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QLWE
Sbjct: 538 YIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWE 597
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 598 TTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|423484484|ref|ZP_17461173.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-2]
gi|401137945|gb|EJQ45520.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-2]
Length = 642
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 332/657 (50%), Positives = 445/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + DR G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGETDRTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD+++FT +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDEEIFTETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|167036441|ref|YP_001664019.1| DNA gyrase subunit B [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256751447|ref|ZP_05492325.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|320114866|ref|YP_004185025.1| DNA topoisomerase IV subunit B [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855275|gb|ABY93683.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749666|gb|EEU62692.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|319927957|gb|ADV78642.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 633
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 322/643 (50%), Positives = 446/643 (69%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVRKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G Y Q+Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVIVKQHGKIYRQRYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ FD++ +A R+RELAFLN + I L E D ++ +N + GG+ +V++LN +K
Sbjct: 179 ETV-FDYDVLAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGIISFVKYLNRNK 233
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHEEPIYMEAKNSD-YEVEVCMQY-NDSYTENIFSFANNIDTREGGTHLVGFKAALTK 291
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVTEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKSGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G++F LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+
Sbjct: 472 TALGTGI-GDEFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL ++ + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 531 PPLYKITKGKKVYYAYSDRELDRILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 TMLKVTLEDAIAADEIFTILMGDKVEPRREFIEKHAKTVRNLD 632
>gi|448373987|ref|ZP_21557872.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
gi|445660664|gb|ELZ13459.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
Length = 643
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/637 (50%), Positives = 438/637 (68%), Gaps = 18/637 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DNA+DEA AG+ +I V +
Sbjct: 5 REYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNAIDEALAGHCEDITVTI 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D+H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 65 HEDGSVSVVDDGRGIPVDIHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEVTV RDG Y + RG+P + V D+ + GT IRFWPD Q+F
Sbjct: 123 VVNALSERLEVTVTRDGGIYEHGFDRGEPDGEME-QVGEPDASNETGTSIRFWPDDQIFE 181
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T ++F + T++ R+RELAFLN + I LR E + D E E F + GG+ E+V+++N
Sbjct: 182 T-LEFSYATLSNRLRELAFLNSGVAITLRDEREVDDEGVIVQETFEYDGGIREFVEYINE 240
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ PLH DVV F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LT
Sbjct: 241 TRSPLHRDVVYFTDEDQSIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N ++ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 300 RVVNDYANENDLLSDLDENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVE 359
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
++ + L Y E +PD +I+ K++ A KA AAK+A +L R+KS L S++LPGKLADC
Sbjct: 360 GAMHDGLATYFEENPDTAQAIVLKAVEAAKARKAAKQAEELTRRKSALDSTALPGKLADC 419
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P+E+E+FI EGDSAGGSAKQ R+ +QAILP++GKILNVE+ + +N+EI+NL
Sbjct: 420 QTRDPDEAELFIAEGDSAGGSAKQARNPDYQAILPIKGKILNVEKHRLDRILENDEIRNL 479
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ G++F + +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 480 ITAIGAGI-GDEFDLDEVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLIEHGYVYAT 538
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + DAE ++ + +QRFKGLGEM P QLW+TT+NPE
Sbjct: 539 QPPLYRIRYRGETYDAMTDAERDEIVAEKCDGNPSQVQRFKGLGEMNPEQLWDTTMNPEN 598
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 599 RILKQVSIEDAAAADRMFSVLMGDAVEPRKQFIKENA 635
>gi|345016457|ref|YP_004818810.1| DNA topoisomerase IV subunit B [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031800|gb|AEM77526.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 633
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/643 (50%), Positives = 442/643 (68%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G Y Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVIVKQHGKIYRQIYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ FD++ +A R+RELAFLN + I L E E+ + + GG+ +V++LN +K
Sbjct: 179 ETV-FDYDVLAQRLRELAFLNKGINIKLIDERHGKEE----VFNYEGGIISFVKYLNRNK 233
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHEEPIYMEAKNSD-YEVEVCMQY-NDSYTENIFSFANNIDTREGGTHLVGFKAALTK 291
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVTEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKSGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG GV G DF LRYHKI+I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+
Sbjct: 472 TALGTGV-GNDFDISKLRYHKIVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL K+ + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 531 PPLYKITKGKKVYYAYSDRELDKILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 TMLKVTLEDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 632
>gi|397690038|ref|YP_006527292.1| DNA gyrase subunit B [Melioribacter roseus P3M]
gi|395811530|gb|AFN74279.1| DNA gyrase subunit B [Melioribacter roseus P3M]
Length = 663
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 328/678 (48%), Positives = 448/678 (66%), Gaps = 56/678 (8%)
Query: 68 FKENPV-SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
K N V S Y ++ I +L+GLEAVRKRPAMYIG G RGLHHL+ E++DN++DEA AG+
Sbjct: 1 MKNNTVQSSEYTAKNINILKGLEAVRKRPAMYIGDVGSRGLHHLINEVVDNSIDEALAGF 60
Query: 127 ASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
+ V + D S IP+D+HP KSALE V+TVLHAGGKF ++ Y VSG
Sbjct: 61 NDTVIVTIHKDQSVTVEDYGRGIPVDIHPVEKKSALEVVMTVLHAGGKFDKNT--YKVSG 118
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS-----KDRQG 232
GLHGVG+SVVNALSE L+V V RDG Y Q+Y RG P PV K + G
Sbjct: 119 GLHGVGVSVVNALSEWLKVEVRRDGKIYTQEYKRGVPQG-------PVKETGTYKKGKSG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 292
T+I F PDK++F T ++F + +A R+RELA+LN +T+ L E+ E+ +Y F G
Sbjct: 172 TKITFKPDKEIFKT-VKFKYEIVAERLRELAYLNKDVTMILIDENEGIEE----KYHFKG 226
Query: 293 GLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
GL ++V++L+ + PLH + + +G +++A ++ SD+Y++ + Y N+I TI+GGT
Sbjct: 227 GLIDFVRYLDEQRNPLHKPIYIEGEKEGTPVEVAFEY-SDSYNENVHTYVNNINTIEGGT 285
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
H+ G + +LTRT N+ K+K +K+ ISL+GE +EGLT +ISV+V P+FEGQTKT+
Sbjct: 286 HLVGFRTALTRTFNNYAYKNKLIKENSKISLTGEDFKEGLTAVISVKVMEPQFEGQTKTK 345
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN EV+ +V+ V E L EYLE +P V I+ KS+ A +A AA++AR+L+R+K+ L
Sbjct: 346 LGNSEVKSIVESIVGEKLAEYLEENPSVAKKIIEKSVKAAEAREAARKARELIRRKNALD 405
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
S +LPGKLADCS PE EI+IVEGDSAGGSAKQGRDRRFQAILP++GKI+NVE+
Sbjct: 406 SLNLPGKLADCSINDPEHCEIYIVEGDSAGGSAKQGRDRRFQAILPIKGKIINVEKAKIN 465
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+ +N+EIQ +I A+G G+ GEDF RY KII++TDADVDG+HIRTLLLTFFYR+ K
Sbjct: 466 KILENQEIQAIISAIGAGI-GEDFDASKSRYGKIILMTDADVDGSHIRTLLLTFFYRHMK 524
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYS--------- 638
L ++G +Y+ PPLYK+++GK+ Y +DD E LK++K
Sbjct: 525 DLINQGKVYIAQPPLYKIKKGKEEFYAFDDEERDAILKRLKGDVKGKEEEEEIADVEETE 584
Query: 639 -----------IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 687
I R+KGLGEM P QLW+TT+NPE R + Q+ +E AA A+ +F +LMG
Sbjct: 585 EQTQKQMKGIVISRYKGLGEMNPEQLWQTTMNPETRTILQVNLESAATADKIFETLMGDA 644
Query: 688 VDTRKELIQNAANLVNLD 705
V+ R+E I+ A LD
Sbjct: 645 VEPRREFIEKHAKYAKLD 662
>gi|288925541|ref|ZP_06419474.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315606674|ref|ZP_07881685.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|402307320|ref|ZP_10826346.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
gi|288337757|gb|EFC76110.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315251684|gb|EFU31662.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|400378834|gb|EJP31685.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
Length = 656
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/655 (49%), Positives = 434/655 (66%), Gaps = 34/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY NIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCKNIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y +GKP+ + V DRQGTR +FWPD VFTT
Sbjct: 128 VNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDRQGTRQQFWPDPTVFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
+ + + IA R+RELAFLN + I LR D E E F A GL+E+V++++ +
Sbjct: 184 TV-YKWDIIASRMRELAFLNAGIRITLRDLRPDEEGKTREEVFHAEQGLKEFVRYVDRHR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTR
Sbjct: 243 THLFDDVIYLKTEKQGVPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRV 301
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKAYADNDAQISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGA 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLA
Sbjct: 362 VQQAVGEALNNYLEEHPVEAKKICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVM 481
Query: 541 NLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + +
Sbjct: 482 NIIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIE 541
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMP 650
EG +Y+ PPLYK K +YCY + + K V+ AL++ QR+KGLGEM P
Sbjct: 542 EGHLYIATPPLYKCTYKKASEYCYTEQQRQAFIDKYVEGREDDKALHT-QRYKGLGEMNP 600
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P R+LKQ+ I++AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 601 EQLWETTMDPATRLLKQVNIQNAAEADEIFSMLMGDDVEPRREFIEKNATYANID 655
>gi|227518104|ref|ZP_03948153.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227555689|ref|ZP_03985736.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229547125|ref|ZP_04435850.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|229550695|ref|ZP_04439420.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|255974526|ref|ZP_05425112.1| subunit B [Enterococcus faecalis T2]
gi|256618523|ref|ZP_05475369.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256761858|ref|ZP_05502438.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256854985|ref|ZP_05560346.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256957011|ref|ZP_05561182.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256960820|ref|ZP_05564991.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256963987|ref|ZP_05568158.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|257078688|ref|ZP_05573049.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|257081351|ref|ZP_05575712.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|257084008|ref|ZP_05578369.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|257087838|ref|ZP_05582199.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|257088490|ref|ZP_05582851.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257417430|ref|ZP_05594424.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257421347|ref|ZP_05598337.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|293382658|ref|ZP_06628586.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|293387930|ref|ZP_06632466.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294781253|ref|ZP_06746600.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|307268921|ref|ZP_07550285.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|307274016|ref|ZP_07555226.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|307276495|ref|ZP_07557615.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|307284063|ref|ZP_07564233.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|307287177|ref|ZP_07567248.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|307296594|ref|ZP_07576414.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|312901292|ref|ZP_07760575.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|312903111|ref|ZP_07762292.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|312908810|ref|ZP_07767749.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|312951716|ref|ZP_07770610.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|312979548|ref|ZP_07791230.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|384511969|ref|YP_005707062.1| DNA topoisomerase subunit B [Enterococcus faecalis OG1RF]
gi|384517111|ref|YP_005704416.1| DNA gyrase subunit B [Enterococcus faecalis 62]
gi|397698588|ref|YP_006536376.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|421514187|ref|ZP_15960879.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|422685146|ref|ZP_16743370.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|422688143|ref|ZP_16746303.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|422691568|ref|ZP_16749602.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|422694316|ref|ZP_16752309.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|422697302|ref|ZP_16755247.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|422701013|ref|ZP_16758855.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|422702817|ref|ZP_16760646.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|422707514|ref|ZP_16765207.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|422709081|ref|ZP_16766595.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|422713181|ref|ZP_16769937.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|422717804|ref|ZP_16774478.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|422719193|ref|ZP_16775841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|422723320|ref|ZP_16779858.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|422726393|ref|ZP_16782841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|422728188|ref|ZP_16784606.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|422730566|ref|ZP_16786955.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|422734914|ref|ZP_16791194.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|422741701|ref|ZP_16795724.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|422868246|ref|ZP_16914793.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|424671212|ref|ZP_18108224.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|424683876|ref|ZP_18120621.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|424685955|ref|ZP_18122632.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|424689103|ref|ZP_18125694.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|424692845|ref|ZP_18129320.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|424696423|ref|ZP_18132774.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|424699254|ref|ZP_18135482.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|424704132|ref|ZP_18140238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|424707526|ref|ZP_18143505.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|424716672|ref|ZP_18145975.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|424719090|ref|ZP_18148314.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|424722657|ref|ZP_18151696.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|424726151|ref|ZP_18154831.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|424734721|ref|ZP_18163210.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|424749321|ref|ZP_18177433.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|424757653|ref|ZP_18185389.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|430362672|ref|ZP_19427149.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|430367112|ref|ZP_19427775.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
gi|15982567|dbj|BAB69478.1| DNA gyrase B subunit [Enterococcus faecalis]
gi|227074438|gb|EEI12401.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227175199|gb|EEI56171.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229304128|gb|EEN70124.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|229307707|gb|EEN73694.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|255967398|gb|EET98020.1| subunit B [Enterococcus faecalis T2]
gi|256598050|gb|EEU17226.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256683109|gb|EEU22804.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256709498|gb|EEU24545.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256947507|gb|EEU64139.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256951316|gb|EEU67948.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256954483|gb|EEU71115.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|256986718|gb|EEU74020.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|256989381|gb|EEU76683.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|256992038|gb|EEU79340.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|256995868|gb|EEU83170.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|256997302|gb|EEU83822.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257159258|gb|EEU89218.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257163171|gb|EEU93131.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|291079964|gb|EFE17328.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|291082667|gb|EFE19630.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294451716|gb|EFG20171.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|295112344|emb|CBL30981.1| DNA gyrase subunit B [Enterococcus sp. 7L76]
gi|306495930|gb|EFM65518.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|306501775|gb|EFM71066.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|306503434|gb|EFM72683.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|306506822|gb|EFM75972.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|306509324|gb|EFM78384.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|306514729|gb|EFM83280.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|310625248|gb|EFQ08531.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|310630289|gb|EFQ13572.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|310633502|gb|EFQ16785.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|311287730|gb|EFQ66286.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|311291669|gb|EFQ70225.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|315026673|gb|EFT38605.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|315030118|gb|EFT42050.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|315033552|gb|EFT45484.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|315036375|gb|EFT48307.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|315143591|gb|EFT87607.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|315148271|gb|EFT92287.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|315151295|gb|EFT95311.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|315153721|gb|EFT97737.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|315155119|gb|EFT99135.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|315158751|gb|EFU02768.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|315163335|gb|EFU07352.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|315165723|gb|EFU09740.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|315168224|gb|EFU12241.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|315170508|gb|EFU14525.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|315174178|gb|EFU18195.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|315573987|gb|EFU86178.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|315578843|gb|EFU91034.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|315581938|gb|EFU94129.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|323479244|gb|ADX78683.1| DNA gyrase, B subunit [Enterococcus faecalis 62]
gi|327533858|gb|AEA92692.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
faecalis OG1RF]
gi|329576322|gb|EGG57837.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|397335227|gb|AFO42899.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|401672707|gb|EJS79173.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|402359313|gb|EJU93949.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|402363750|gb|EJU98209.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|402368565|gb|EJV02877.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|402369341|gb|EJV03626.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|402376725|gb|EJV10651.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|402376743|gb|EJV10666.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|402377901|gb|EJV11789.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|402382703|gb|EJV16353.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|402384310|gb|EJV17868.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|402387286|gb|EJV20771.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|402397208|gb|EJV30238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|402400529|gb|EJV33351.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|402401442|gb|EJV34216.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|402406399|gb|EJV38956.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|402406469|gb|EJV39020.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|402407982|gb|EJV40478.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|429511943|gb|ELA01563.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|429516769|gb|ELA06246.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
Length = 649
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/651 (49%), Positives = 442/651 (67%), Gaps = 33/651 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 305 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 244 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKT 298
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 299 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 358
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 359 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 418
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI
Sbjct: 419 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEI 478
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G +
Sbjct: 479 RSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYV 537
Query: 600 YVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QLWE
Sbjct: 538 YIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWE 597
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 598 TTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|424677999|ref|ZP_18114846.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|424679672|ref|ZP_18116489.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
gi|402352698|gb|EJU87539.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|402355888|gb|EJU90643.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
Length = 649
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/651 (49%), Positives = 442/651 (67%), Gaps = 33/651 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRRGGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 305 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 244 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKT 298
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 299 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 358
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 359 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 418
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI
Sbjct: 419 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEI 478
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G +
Sbjct: 479 RSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYV 537
Query: 600 YVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QLWE
Sbjct: 538 YIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWE 597
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 598 TTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|355674400|ref|ZP_09059585.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
gi|354813963|gb|EHE98566.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
Length = 637
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/646 (49%), Positives = 438/646 (67%), Gaps = 23/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ +DNSI P+D+ A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINSDNSITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV V++DG Y Q+Y RGK T ++ ++ GT++ F PD ++
Sbjct: 119 ASVVNALSEWLEVQVFKDGNIYQQRYQRGK--VTYPLKIVGKCGPEQHGTKVTFLPDTEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F ++D++T+ R+RE AFL L I LR E E+ + + + GG++E+V +LN
Sbjct: 177 FEET-EYDYDTLKIRLRETAFLTKNLRITLRDE---REEKKEKTFHYEGGIKEFVTYLNK 232
Query: 304 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K PL++ V + + +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPLYEQVIYCEGTKEGVFVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T N +K+K +K+ + SLSGE +REGLT IIS++V P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYARKNKLLKENEDSLSGEDIREGLTAIISIKVAEPQFEGQTKQKLGNSEARTAVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LT +LE +P + ++ KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPGIAKAMCEKSILAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE EI+IVEGDSAGGSAK R R QAILPLRGKILNVE+ +Y N EI+ +
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ EDF LRYHKIII+TDADVDGAHI TLLLTF YR+ L +G +Y+
Sbjct: 472 ITAFGTGIH-EDFDISKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPELIKQGYVYLA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+E+ K+V Y Y D EL + + IQR+KGLGEM QLWETT++PE+
Sbjct: 531 QPPLYKIEKNKKVWYAYSDDELNSIMMEIGRDTNNKIQRYKGLGEMDAEQLWETTMDPER 590
Query: 663 RMLKQLVI--EDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R+L ++ + E +E ++ F++LMG +V+ R+E I+ NA + NLD
Sbjct: 591 RILLRVTMDEETTSEIDLTFTTLMGDQVEPRREFIEANAKRVQNLD 636
>gi|322370371|ref|ZP_08044930.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
gi|320550079|gb|EFW91734.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
Length = 638
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 330/634 (52%), Positives = 430/634 (67%), Gaps = 21/634 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I+V +
Sbjct: 7 YSAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDSIDVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D H + ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSIADDGRGIPVDRHEEYDMPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGISVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +V V RDG + Q + RG P + V + + GT RFWPD ++F T
Sbjct: 125 NALSEKFDVEVKRDGGVWKQTFERGDPAGEME-RVRDMRDDEETGTYQRFWPDTEIFETT 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F ++T+ R+RELAFLN + I L E D EK + + ++GG+ E+V++LN K
Sbjct: 184 -DFTYSTLENRLRELAFLNSGVAITLADE-RDEEKG--DTFHYSGGIREFVEYLNETKTA 239
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH +V+ F + D I +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHNEVIYFEDEDDNIQVEVAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V
Sbjct: 299 DYANDNDMLGDLDENLRGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVH 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+ Y E HPD +I+SK++ A KA AAK+A +L R+KS L SS+LPGKLADC S
Sbjct: 359 EGLSVYFEEHPDTAQAIISKAVEAAKARKAAKKAEELTRRKSALESSALPGKLADCQSRD 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P +SE+F+VEGDSAGGSAKQ RDR FQAILPL GK+LNVE+ + +NE+I+N I A+
Sbjct: 419 PTKSELFVVEGDSAGGSAKQARDREFQAILPLFGKVLNVEKHRLDRVLENEKIRNFITAI 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV GE+F + RYHKIII+TDADVDGAHIRTL LT YRY + L + G +Y PPL
Sbjct: 479 GTGV-GEEFDIDDARYHKIIIMTDADVDGAHIRTLYLTLLYRYMRPLLEAGYVYAAQPPL 537
Query: 607 YKVE-RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
Y+V RGK ++ + ++ N +QRFKGLGEM P QLWETT+NPE R+L
Sbjct: 538 YRVRYRGKTYDAMTEEERDEIIEEKCDGNP-SQVQRFKGLGEMNPEQLWETTMNPENRIL 596
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
KQ+ IEDAA A+ +FS LMG V RK+ IQ+ A
Sbjct: 597 KQITIEDAAAADKMFSVLMGDAVGPRKQFIQDHA 630
>gi|417925090|ref|ZP_12568517.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
gi|341592387|gb|EGS35273.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
Length = 638
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 444/647 (68%), Gaps = 28/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L V RDG Y Q++ +GK VT LT V GT I F PD +F
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTVVKENVRG---TGTTIEFLPDDTIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T + FD N +A R RE+AFLN + I E++ Y E F + GG++ +V+++N
Sbjct: 179 ET-LNFDRNVLAKRFREMAFLNKGVKIEFA-----DERDGYKELFHYEGGIKSFVEYINK 232
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LT
Sbjct: 233 SKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD
Sbjct: 292 RALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC
Sbjct: 352 SVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ E +EIF+VEGDSAGGSAK GRD +FQAILPLRGKILNVE+ + +EEI+ +
Sbjct: 412 QSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F LRY KI+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+
Sbjct: 472 ITAFGTGI-GKNFDISKLRYGKIVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIA 530
Query: 603 VPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY + +G K ++YCY + EL++ + + +QR+KGLGEM QLW+TT+NPE
Sbjct: 531 QPPLYGIIKGVKVMEYCYTEQELEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPE 590
Query: 662 QRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ I ED E + F LMG V+ R+E I QNA N+D
Sbjct: 591 HRILIKVEIDGEDENELDNTFDVLMGDNVEPRREFIEQNAVYAQNID 637
>gi|385808591|ref|YP_005844987.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
gi|383800639|gb|AFH47719.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
Length = 665
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 326/675 (48%), Positives = 444/675 (65%), Gaps = 52/675 (7%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
+N S Y ++ I VL+GLEAVRKRPAMYIG G RGLHHL+ E++DN++DEA AG+
Sbjct: 3 KNNNSNEYSAKNINVLKGLEAVRKRPAMYIGDVGTRGLHHLINEVVDNSIDEALAGFNDR 62
Query: 130 IEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
+ V L D S IP+D+HP KSALE V+TVLHAGGKF +S Y VSGGLH
Sbjct: 63 VIVTLHKDGSVSVEDRGRGIPVDIHPVEKKSALEVVMTVLHAGGKFDKNS--YKVSGGLH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALSE ++V V RD Y Q+Y RG PV + + D+ GT+I F PD
Sbjct: 121 GVGVSVVNALSEWMKVEVRRDNKIYFQEYRRGVPVEKVKE--IGTYKGDQTGTKITFMPD 178
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
K +F +F+ T+A R+RELA+LN +T+ L+ E+ E+ Y F GGL ++V++
Sbjct: 179 KTIFKVT-KFNFETVAERLRELAYLNKDVTMILKDENDGTEET----YRFKGGLIDFVKY 233
Query: 301 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
L+ ++P+H + + + +++A ++ S++YS+ + Y N+I TI+GGTH+ G + +
Sbjct: 234 LDEQREPIHKPIYIEGEKENTPVEIAFEY-SNSYSENVHSYVNNINTIEGGTHLVGFRTA 292
Query: 361 LTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRT N+ K+ +K+ I+L+G+ REGLT ++SV+V P+FEGQTKT+LGN EV+
Sbjct: 293 LTRTFNNYAYKNGLIKENSKITLTGDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEVKS 352
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VV+ V E L+EYLE +P V I+ KSL A +A AA++AR+LVR+K+ L S LPGKL
Sbjct: 353 VVETIVGEKLSEYLEQNPSVAKKIIEKSLKAAEAREAARKARELVRRKNALDSMHLPGKL 412
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS T PE EI+IVEGDSAGGSAKQGRDRRFQAILP++GKILNVE+ + +N+EI
Sbjct: 413 ADCSITDPEHCEIYIVEGDSAGGSAKQGRDRRFQAILPIKGKILNVEKAKLNKILENQEI 472
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q ++ A+G G+ GEDF RY KII++TDADVDG+HIRTLLLTFFYR+ K L G +
Sbjct: 473 QAIVAAIGAGI-GEDFDPTKSRYGKIILMTDADVDGSHIRTLLLTFFYRHMKELITSGRV 531
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---------------------------- 631
Y+ PPLYKV++GK+ + +DD EL ++ F
Sbjct: 532 YIAQPPLYKVKKGKEEVFAFDDEELDQILKRFKADGKAAKAKLKEIETEGEQVIETDEEG 591
Query: 632 -PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 690
P + I R+KGLGEM P QLW TT+NPE R + Q+ +E AA A+ +F +LMG V+
Sbjct: 592 QPKGVV--ITRYKGLGEMNPEQLWSTTMNPETRTILQVNLESAAAADKIFETLMGDAVEP 649
Query: 691 RKELIQNAANLVNLD 705
R+E I+ A NLD
Sbjct: 650 RREFIEKHAKYANLD 664
>gi|302380141|ref|ZP_07268614.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
gi|302312083|gb|EFK94091.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
Length = 638
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 444/647 (68%), Gaps = 28/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L V RDG Y Q++ +GK VT LT V GT I F PD +F
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTVVKENVRG---TGTTIEFMPDDTIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T + FD N +A R RE+AFLN + I E++ Y E F + GG++ +V+++N
Sbjct: 179 ET-LNFDRNVLAKRFREMAFLNKGVKIEFA-----DERDGYKELFHYEGGIKSFVEYINK 232
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LT
Sbjct: 233 SKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD
Sbjct: 292 RALNDYARNKSILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC
Sbjct: 352 SVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ E +EIF+VEGDSAGGSAK GRD +FQAILPLRGKILNVE+ + +EEI+ +
Sbjct: 412 QSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F LRY KI+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+
Sbjct: 472 ITAFGTGI-GKNFDISKLRYGKIVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIA 530
Query: 603 VPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY + +G K ++YCY + EL++ + + +QR+KGLGEM QLW+TT+NPE
Sbjct: 531 QPPLYGIIKGVKVMEYCYTEQELEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPE 590
Query: 662 QRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ I ED E + F LMG V+ R+E I QNA N+D
Sbjct: 591 HRILIKVEIDGEDENELDNTFDVLMGDNVEPRREFIEQNAVYAQNID 637
>gi|303234457|ref|ZP_07321095.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
gi|302494412|gb|EFL54180.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
Length = 638
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 444/647 (68%), Gaps = 28/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L V RDG Y Q++ +GK VT LT V GT I F PD +F
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTVVKENVRG---TGTTIEFMPDDTIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T + FD N +A R RE+AFLN + I E++ Y E F + GG++ +V+++N
Sbjct: 179 ET-LNFDRNVLAKRFREMAFLNKGVKIEFA-----DERDGYKELFHYEGGIKSFVEYINK 232
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LT
Sbjct: 233 SKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD
Sbjct: 292 RALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC
Sbjct: 352 SVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ E +EIF+VEGDSAGGSAK GRD +FQAILPLRGKILNVE+ + +EEI+ +
Sbjct: 412 QSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F LRY KI+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+
Sbjct: 472 ITAFGTGI-GKNFDISKLRYGKIVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIA 530
Query: 603 VPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY + +G K ++YCY + EL++ + + +QR+KGLGEM QLW+TT+NPE
Sbjct: 531 QPPLYGIIKGVKVMEYCYTEQELEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPE 590
Query: 662 QRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ I ED E + F LMG V+ R+E I QNA N+D
Sbjct: 591 HRVLIKVEIDGEDENELDNTFDVLMGDNVEPRREFIEQNAVYAQNID 637
>gi|390454457|ref|ZP_10239985.1| DNA gyrase subunit B [Paenibacillus peoriae KCTC 3763]
Length = 639
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 327/644 (50%), Positives = 441/644 (68%), Gaps = 29/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY +I+V +
Sbjct: 10 SYDAGEIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVH 69
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+ H KSALE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 70 TDNSVTVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P V + D GT+ F+PD+Q+FT
Sbjct: 128 VNALSSKMVVHVKRDGHVYEQEYHRGVP----QYDVRVIGDTDETGTQTTFYPDEQIFTE 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 184 TTVYDYDTLQTRIRELAFLNKGIAISL----TDERTGASDTFHYEGGISEYVQFLNQQRE 239
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 240 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +KD + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 RIINDYARKNGMIKDSNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 356 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + ++EI+++
Sbjct: 416 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSM 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
+ A+G G+ G+DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + D G +Y+
Sbjct: 476 VTAMGTGI-GDDFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKILDAGYVYIA 534
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+KVER K ++Y + E ++ F NA Y++QR+KGLGEM QLWETT++PE
Sbjct: 535 QPPLFKVERNKVIRYANSEVERDEIIREFGENAKYNVQRYKGLGEMNAAQLWETTMDPES 594
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ I DA A+ +F++LMG V+ R++ IQ A V NLD
Sbjct: 595 RTMLQVTINDAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLD 638
>gi|448339329|ref|ZP_21528357.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
gi|445620558|gb|ELY74054.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
Length = 642
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 312/635 (49%), Positives = 436/635 (68%), Gaps = 19/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG+ + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDEETGTEIRFWPDTDIFETG 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR +E++D ++ Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDEGESVAETYEYDGGIREFVDYLNETR 241
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD ++ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDIIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDNNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 480
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F + +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 481 AIGAGI-GDEFDIDDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 539
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE ++ +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 540 PLYRIRYRGETYDAMTEAERDRIVEEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPENRI 599
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 600 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 634
>gi|310639477|ref|YP_003944235.1| DNA gyrase subunit b [Paenibacillus polymyxa SC2]
gi|386038696|ref|YP_005957650.1| DNA gyrase subunit B [Paenibacillus polymyxa M1]
gi|309244427|gb|ADO53994.1| DNA gyrase subunit B [Paenibacillus polymyxa SC2]
gi|343094734|emb|CCC82943.1| DNA gyrase subunit B [Paenibacillus polymyxa M1]
Length = 636
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 328/644 (50%), Positives = 443/644 (68%), Gaps = 29/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY ++I+V +
Sbjct: 7 SYDAGEIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVWEVVDNSIDEALAGYCNSIQVVVH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ H KSALE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 67 KDNSITVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P V + + GT+ F+PD+Q+FT
Sbjct: 125 VNALSSKMIVHVKRDGHVYEQEYHRGAP----QYDVRVIGDTEETGTQTTFYPDEQIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D++T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 181 TTVYDYDTLQTRIRELAFLNKGIAISL----TDERTGASDTFHYEGGISEYVQFLNQKRE 236
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 237 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 292
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +KD + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 293 RIINDYARKNGLIKDNNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 352
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 353 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 412
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + ++EI+++
Sbjct: 413 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSM 472
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
+ A+G G+ G+DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + D G IY+
Sbjct: 473 VTAMGTGI-GDDFDITKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIA 531
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+KVER K V+Y +AE ++ F NA Y++QR+KGLGEM QLWETT++PE
Sbjct: 532 QPPLFKVERNKVVRYANSEAERDEIIKEFGENAKYNVQRYKGLGEMNATQLWETTMDPES 591
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ + DA A+ +F++LMG V+ R++ IQ A V NLD
Sbjct: 592 RTMLQVTVSDAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLD 635
>gi|225386349|ref|ZP_03756113.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
gi|225047531|gb|EEG57777.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
Length = 638
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 327/646 (50%), Positives = 436/646 (67%), Gaps = 22/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +IEV
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIEV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+ + A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVIDDGRGIPVGIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV V+ DG Y Q+Y RGK + L ++ GT +RF PDK++
Sbjct: 119 ASVVNALSEWLEVQVYLDGNIYQQRYERGKVMYPL--KIVGKCEPHEHGTHVRFLPDKEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F +FD++T+ R+RE AFL L I LR D E+ + + + GG+ E+V +LN
Sbjct: 177 FEET-EFDYDTLKIRLRETAFLTKNLKITLR--DDREEEVKEKTFHYEGGIREFVAYLNK 233
Query: 304 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K PL++ V + + +G+ ++++LQ +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 234 GKTPLYEQVIYCEGTREGVYVEVSLQH-NDSYTEGIYTFVNNINTPEGGTHLTGFKNALT 292
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T N +K+K +K+ + SLSGE +REGLT IISV++ +P+FEGQTK +LGN E R VD
Sbjct: 293 KTFNDYARKNKLLKENEDSLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARTAVD 352
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LT +LE +P V SI KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 353 NVVSEQLTYFLEQNPSVAKSICEKSILAQRARAAARKARDLTRRKSALDGVALPGKLADC 412
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P EI+IVEGDSAGGSAK R R QAILPLRGKILNVE+ +Y N EI+ +
Sbjct: 413 SDKNPVNCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAM 472
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ EDF LRYHKIII+TDADVDGAHI TLLLTF YR+ L +G +Y+
Sbjct: 473 ITAFGTGIH-EDFDITKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPELIKQGYVYLA 531
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVE+ K++ Y Y D EL + + + IQR+KGLGEM QLWETT++PE+
Sbjct: 532 QPPLYKVEKNKRIWYAYSDEELNSILTDVGRDGNNKIQRYKGLGEMDAEQLWETTMDPER 591
Query: 663 RMLKQLVIED--AAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R+L ++ ++D +E ++ F++LMG +V+ R+E I+ NA + NLD
Sbjct: 592 RILLRVTMDDETQSELDLTFTTLMGDQVEPRREFIESNAKRVQNLD 637
>gi|448323114|ref|ZP_21512578.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
gi|445600300|gb|ELY54313.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
Length = 643
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 318/635 (50%), Positives = 431/635 (67%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V + A
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGHCDDITVTINA 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D+S IP+D H + ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSVTVSDDGRGIPVDTHDEYERPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + +D + GT + FWPD VF T
Sbjct: 125 NALSERLEAEVKRDGAVFRHAFEAGEPVGDME-RARDMDDDEETGTEVTFWPDTDVFETR 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDK 305
F +T++ R+RELAFLN + I LR E + E + E Y + GG+ E+V++LN +
Sbjct: 184 -DFSFSTLSNRLRELAFLNSGVRITLRDERQETEDGEVIEETYEYEGGIREFVEYLNETR 242
Query: 306 KPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD V + +D D I +++A+Q D ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 SVMHDDVIYFEDEDQNIQVEVAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRV 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G ++ + D D +L+GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYGNENNLLGDIDGNLTGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEQLGTYFEEHPDTAQAIVLKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PEE+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 KDPEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F + +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDIDDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + DAE ++ +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 541 PLYRIRYRGETYDAMTDAERDEIVEEVCDGNPTQVQRFKGLGEMNPEQLWETTMNPENRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ +EDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 LKQITVEDAAAADKMFSVLMGDAVEPRKQFIKDHA 635
>gi|363894897|ref|ZP_09321945.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
gi|361961139|gb|EHL14363.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
Length = 641
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/652 (49%), Positives = 451/652 (69%), Gaps = 30/652 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 3 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V++ +N I P+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 63 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 235
HGVG+SVVNALS+SL V +DG Y Q++ G VT + TC + + GT I
Sbjct: 121 HGVGVSVVNALSKSLTAVVKKDGKVYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 174
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD+++F + + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 175 SFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 231
Query: 296 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 232 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 290
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 291 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 350
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 351 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 410
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + QAILPLRGKILNVE+
Sbjct: 411 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAILPLRGKILNVEKSRLDKAL 470
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+++ I+N+I A G G+ G ++ + LRYHKIII++DADVDGAHIRTL+LTFF+RY + L
Sbjct: 471 QSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSDADVDGAHIRTLILTFFFRYMRPLI 529
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G +Y+ PPL+ +E+GK+ Y Y EL++ + + + R KGLGEM +L
Sbjct: 530 ENGYVYIAQPPLFSIEKGKKTFYAYSPEELEQKLNEIGRERVL-VSRNKGLGEMDAEELG 588
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+TT++P+ R+L ++ +EDAAEA+ +FS LMG +V+ R++ IQ A V NLD
Sbjct: 589 DTTMDPKNRVLLKVNLEDAAEADEIFSVLMGDKVEPRRDFIQQNARYVENLD 640
>gi|29374666|ref|NP_813818.1| DNA gyrase subunit B [Enterococcus faecalis V583]
gi|257418838|ref|ZP_05595832.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
gi|29342124|gb|AAO79890.1| DNA gyrase, B subunit [Enterococcus faecalis V583]
gi|257160666|gb|EEU90626.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
Length = 642
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/651 (49%), Positives = 442/651 (67%), Gaps = 33/651 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 5 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 65 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 123 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 179 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 236
Query: 305 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 237 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKT 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 292 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 351
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 352 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 411
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI
Sbjct: 412 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEI 471
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G +
Sbjct: 472 RSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYV 530
Query: 600 YVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QLWE
Sbjct: 531 YIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWE 590
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 591 TTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 641
>gi|448346437|ref|ZP_21535322.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
gi|445632640|gb|ELY85851.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
Length = 642
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 313/635 (49%), Positives = 435/635 (68%), Gaps = 19/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG+ + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDEETGTEIRFWPDTDIFETG 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR +E++D + Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDEGETVAETYEYDGGIREFVDYLNETR 241
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDNNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 480
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 481 AIGAGI-GDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 539
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE + + +QRFKGLGEM P QLWETT+NP+ R+
Sbjct: 540 PLYRIRYRGETYDAMTEAERDAIVAEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRI 599
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 600 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 634
>gi|315917788|ref|ZP_07914028.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
gi|317059526|ref|ZP_07924011.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313685202|gb|EFS22037.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313691663|gb|EFS28498.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
Length = 638
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/642 (49%), Positives = 431/642 (67%), Gaps = 19/642 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I VLEGLEAVRKRP MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L
Sbjct: 3 NYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNTITVSIL 62
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 PDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE E+ V RDG Y+QKY RGKP+ + + +++ D GT + F PD ++F T
Sbjct: 121 VNALSEWTEIKVKRDGNVYYQKYLRGKPIEDVKI-ISSLEAGDTTGTTVTFKPDAEIFET 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I F++ + R++ELA+LN L I L D E + ++ F GG+ ++++ + + +
Sbjct: 180 VI-FEYEVLQHRLKELAYLNRGLEINLL--DCRNEIGKKEKFQFEGGISDFLKEVTHENQ 236
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L + + + +D+A + + + S+T+ + N+I T +GGTH+ G + LT+ +
Sbjct: 237 VLLSKQIHVEGQAEQVGVDIAFTYTT-SQSETIYSFVNNINTTEGGTHVTGFRTCLTKVI 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +K+KD L G +REG+ IISV+VP P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NDIGKSQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNSVL 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P+ I+ K L++ KA AA+RAR+ V +KSVL SLPGKLADCSS
Sbjct: 356 SVDLKIFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIF+VEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ ++EEI+ ++ A
Sbjct: 416 KSEECEIFLVEGDSAGGSAKQGRDRYFQAILPLKGKILNVEKAGLHKALESEEIRAMVTA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + E F LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PP
Sbjct: 476 FGTNIGEESFDLNKLRYGKIILMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPP 535
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYK+ GK ++Y Y DA+LK++ S N Y++QR+KGLGEM P QLWETT++PE R+
Sbjct: 536 LYKISFGKSIRYAYTDAQLKEILQSVEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARL 595
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E IQ A N+D
Sbjct: 596 LLKVSIDNAREADMLFDKLMGDKVEPRREFIQEHAEYAKNID 637
>gi|331270701|ref|YP_004397193.1| DNA gyrase subunit B [Clostridium botulinum BKT015925]
gi|329127251|gb|AEB77196.1| DNA gyrase, B subunit [Clostridium botulinum BKT015925]
Length = 635
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 326/643 (50%), Positives = 452/643 (70%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 5 QVYDESQIQVLEGLEAVRKRPGMYIGSTGIRGLHHLVYEIVDNSIDEALAGFCQNIKVYI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+NS+ P+ +HP + +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 65 HKNNSVTVKDDGRGMPVGIHPKMKRPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ +V V R+G + Q+Y +GK + L + + +GT + F PD ++F
Sbjct: 123 VVNALSKYCKVEVRREGHVWMQEYKKGKVASELEV----IGDSEERGTLVYFEPDDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++FD++T++ R+RELAFLN I L E + E+ E+ + GG++ +V +LN +K
Sbjct: 179 -EVEFDYDTLSHRLRELAFLNKGTRIILVDEREEKEQ----EFHYEGGIKSFVSYLNRNK 233
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + D +++ALQ+ +D Y+D + +AN+I TI+GGTH+ G K++LTR
Sbjct: 234 QTLHEEPIYVEGNKDDYLVEVALQY-NDTYNDNIFAFANNIDTIEGGTHLAGFKSALTRV 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
LN ++ +K+ D +LSG+ REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 293 LNDYARRYGYLKETDKNLSGDDTREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDSI 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E ++E+LE +PD +++ KSL+A +A AAK+AR+L R+KSVL S++LPGKLADCSS
Sbjct: 353 VSERVSEFLEENPDTAKTVIEKSLTAARAREAAKKARELTRRKSVLESTALPGKLADCSS 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE++ + +E+I+ +I
Sbjct: 413 KDPSECEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKIMNVEKQRLDKILNSEQIRAMIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF E +RYH+III+TDADVDGAHI TLLLTFFYRY + L + G +Y+ P
Sbjct: 473 AFGAGI-GKDFDIEKIRYHRIIIMTDADVDGAHIATLLLTFFYRYMRELVEGGHVYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V+RGK ++Y Y D ELK+V + + IQR+KGLGEM QLW+TT+NPE R
Sbjct: 532 PLYQVKRGKVIRYSYSDNELKQVLTELGGKDKNTEIQRYKGLGEMDATQLWDTTMNPEHR 591
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L ++ I+DA A+ VF+ LMG +V+ R+E I +NA +VNLD
Sbjct: 592 TLVKVTIDDAMRADEVFTILMGDKVEPRREFIEENAKKVVNLD 634
>gi|302872928|ref|YP_003841561.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|307687881|ref|ZP_07630327.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|302575785|gb|ADL49797.1| DNA gyrase, B subunit [Clostridium cellulovorans 743B]
Length = 636
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/646 (50%), Positives = 448/646 (69%), Gaps = 31/646 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 6 QSYDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGFCKNIDVII 65
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H N+ A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 66 HEDNSISVKDDGRGMPVGMHAKMNRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE+ VTV DG + Q++ RG T L + + GT + F PD ++F
Sbjct: 124 VVNALSETCIVTVSIDGKIHRQEFHRGNVATELEV----IGETEEHGTEVFFTPDHEIFE 179
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T ++FD++T+ R+RELAFLN + I++ D ++ + + + GG++ +V +LN +K
Sbjct: 180 T-LEFDYDTLVQRLRELAFLNKGINISI----EDRRNDKSDSFHYDGGIKSFVSYLNRNK 234
Query: 306 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ L + G + D I +++ALQ+ +D Y + + +AN+I T +GGTH+ G K ++
Sbjct: 235 EALFPEPIYIEGIQND---ILVEIALQY-NDTYQENIFSFANNIDTAEGGTHLAGFKNAM 290
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +K +K+ D +LSGE VREGLT IISV++P PEFEGQTKT+LGN EVR +V
Sbjct: 291 TRVINDYARKFGFLKENDKNLSGEDVREGLTAIISVKIPEPEFEGQTKTKLGNSEVRGIV 350
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D + ++ +LE +P V I+ K+L+A +A AAK+AR+L R+KS+L S+SLPGKLAD
Sbjct: 351 DSILGGSVSTFLEENPSVGKIIVDKALTASRAREAAKKARELTRRKSILESTSLPGKLAD 410
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS P E EI+IVEGDSAGGSAKQGR+RRFQAILPLRGKI+NVE++ + ++ I++
Sbjct: 411 CSSKDPSECEIYIVEGDSAGGSAKQGRNRRFQAILPLRGKIMNVEKQRLDKILGSDTIRS 470
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A G G+ G+DF + LRYH+III+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+
Sbjct: 471 MITAFGAGI-GKDFDLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRYMRDMIEKGHVYI 529
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV R K+ Y Y+D ELK + K + IQR+KGLGEM QLW+TT++P
Sbjct: 530 AQPPLYKVSRNKKEWYAYNDDELKDILKDIGGKDNSTVIQRYKGLGEMDAQQLWDTTMDP 589
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
E R+L ++ + +A A+ +F+ LMG +V+ R+E IQ NA N+VNLD
Sbjct: 590 EHRLLLKVDMGEAMMADEIFTILMGEKVEPRREFIQENAKNVVNLD 635
>gi|302344968|ref|YP_003813321.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
gi|302149978|gb|ADK96240.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
Length = 657
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/662 (48%), Positives = 445/662 (67%), Gaps = 34/662 (5%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
ENP ++ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 3 ENPENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQ 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
NIEV + DNSI P+D+H +KSALE V+TVLHAGGKF S Y VSGGL
Sbjct: 63 NIEVTINEDNSITVEDDGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS ++ V+RDG Y Q+Y +GKP+ + V D+ GTR +FWP
Sbjct: 121 HGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEY 297
D ++FTT + + +A R+RELA+LN + I L DPE + E F A GL+E+
Sbjct: 177 DPEIFTTTV-YQWAIVARRMRELAYLNAGIKITLSDLRPDPETGKTRTEVFHAKDGLKEF 235
Query: 298 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++++ ++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G
Sbjct: 236 VRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQG 294
Query: 357 VKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
+A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+L
Sbjct: 295 FRAALTRTLKTYADNDPQISKQLEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKL 354
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+
Sbjct: 355 GNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSG 414
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+
Sbjct: 415 GGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHR 474
Query: 533 MYKNEEIQNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFY 587
+++ E + N+I+++G+ GV+GE DF+ + LRY KIII+TDADVDG+HI TL++T FY
Sbjct: 475 VFEAESVMNIIQSIGVRFGVEGEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFY 534
Query: 588 RYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA----LYSIQRFK 643
RY + ++G +Y+ PPLYK K +YCY + + + + + A QR+K
Sbjct: 535 RYMPKVIEQGHLYIATPPLYKCTYKKVNEYCYTEQQRQAFIDKYANGAEDAKAIHTQRYK 594
Query: 644 GLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVN 703
GLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N
Sbjct: 595 GLGEMNPEQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATYAN 654
Query: 704 LD 705
+D
Sbjct: 655 ID 656
>gi|53711588|ref|YP_097580.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60679839|ref|YP_209983.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|265764971|ref|ZP_06093246.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|336407776|ref|ZP_08588272.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|375356678|ref|YP_005109450.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|383116590|ref|ZP_09937338.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|423248251|ref|ZP_17229267.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|423253200|ref|ZP_17234131.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|423259366|ref|ZP_17240289.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|423263662|ref|ZP_17242665.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|423269860|ref|ZP_17248832.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|423272686|ref|ZP_17251633.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|423282448|ref|ZP_17261333.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
gi|52214453|dbj|BAD47046.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60491273|emb|CAH06021.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|251948137|gb|EES88419.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|263254355|gb|EEZ25789.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|301161359|emb|CBW20899.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|335944855|gb|EGN06672.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|387776946|gb|EIK39046.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|392657100|gb|EIY50737.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|392660358|gb|EIY53972.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|392700706|gb|EIY93868.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|392707084|gb|EIZ00204.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|392708600|gb|EIZ01706.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|404582016|gb|EKA86711.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
Length = 652
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/657 (48%), Positives = 440/657 (66%), Gaps = 29/657 (4%)
Query: 69 KENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++NP + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY
Sbjct: 4 EQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYC 63
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+IEV + DNSI P+D H KSALE +TVLHAGGKF S Y VSGG
Sbjct: 64 DHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGG 121
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V D GT+ +FW
Sbjct: 122 LHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYP----VKEVGIADHTGTKQQFW 177
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEE 296
PD +FT I +D+ +A R+RELA+LN L I+L R+ ++ ++ ++ GL E
Sbjct: 178 PDDSIFTETI-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKHETFYSEEGLRE 236
Query: 297 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V+++ + ++ L +DV+ + I I++A+ + + +S+ + Y N+I TI+GGTH+
Sbjct: 237 FVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-GFSENIHSYVNNINTIEGGTHLA 295
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G + +LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN
Sbjct: 296 GFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNN 355
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EV VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + L
Sbjct: 356 EVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGGL 415
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +
Sbjct: 416 PGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKALE 475
Query: 536 NEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+EEI+N+ ALG+ + E+ K A LRYHKIII+TDADVDG+HI TL++TFF+RY
Sbjct: 476 SEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMP 535
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEM 648
+ G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM
Sbjct: 536 QIIQNGYLYIATPPLYLCKKGKIEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEM 594
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 595 NAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|379794532|ref|YP_005324530.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356871522|emb|CCE57861.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 644
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 434/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNEAIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D + + + Y + GG++ YV+ LN
Sbjct: 185 TETTIYNYETLQQRIRELAFLNKGIQITLRDE-RDEDNIREDSYHYEGGIKSYVELLNEK 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL+K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELEKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|357056605|ref|ZP_09117644.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
gi|355379970|gb|EHG27117.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
Length = 637
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/646 (50%), Positives = 439/646 (67%), Gaps = 23/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE LEV V++DG Y Q+Y RGK T ++ ++ GT++ F PDK++
Sbjct: 119 ASVVNALSEWLEVQVYKDGNIYQQRYERGK--VTYPLKIVGKCGPEQHGTKVTFLPDKEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F + +D++T+ R+RE AFL L I L+ D+ EK + + + GG++E+V +LN
Sbjct: 177 FEETV-YDYDTLKIRLRETAFLTKNLKIILK--DNREEKKE-KVFHYEGGIKEFVTYLNR 232
Query: 304 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K P++D V + + +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPIYDQVIYCEGTREGVYVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T N ++ K +KD + +LSGE +REGLT IISV++ +P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYAREKKLLKDSEDNLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARAAVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LT +LE +P V SI KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPAVAKSICEKSILAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE EI+IVEGDSAGGSAK R R QAILPLRGKILNVE+ +Y N EI+ +
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ +DF LRYHKIII+TDADVDGAHI TLLLTF YR+ L +G +Y+
Sbjct: 472 ITAFGTGIH-DDFDISKLRYHKIIIMTDADVDGAHISTLLLTFIYRFMPELIKQGYVYLA 530
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKVE+ K+V Y Y D EL + + IQR+KGLGEM QLWETT++PE+
Sbjct: 531 QPPLYKVEKNKKVWYAYSDEELNSILMDIGRDNSNKIQRYKGLGEMDAEQLWETTMDPER 590
Query: 663 RMLKQLVI--EDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R+L ++ + E +E ++ F++LMG +V+ R+E I+ NA + NLD
Sbjct: 591 RILLRVTMDEETTSEVDLTFTTLMGDQVEPRREFIEANAKKVKNLD 636
>gi|448317100|ref|ZP_21506658.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
gi|445604524|gb|ELY58471.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
Length = 643
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 318/635 (50%), Positives = 434/635 (68%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V + A
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGHCDDITVTIEA 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVLVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEGGEPVGDME-RVRDMEPDEETGTEIRFWPDGDIFETG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+F +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V++LN +
Sbjct: 184 -EFSFSTLSSRLRELAFLNSGVRITLRDEREETDDGAAVEETYEYEGGIREFVEYLNETR 242
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD V+ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 AVMHDDVIYFEGEDENVQVEVAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRV 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G + + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 302 VNDYGNERNLLGDVDGNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVEGA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEQLGTYFEEHPDTAEAIVAKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 RDPDEAELFIAEGDSAGGSAKQARNPEFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F + +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDIDDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + DAE ++ +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 541 PLYRIRYRGETYDAMTDAERDEIVEEVCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ +EDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 LKQITVEDAAAADKMFSVLMGDAVEPRKQFIKDHA 635
>gi|118445175|ref|YP_879293.1| DNA gyrase subunit B [Clostridium novyi NT]
gi|118135631|gb|ABK62675.1| DNA gyrase, B subunit [Clostridium novyi NT]
Length = 637
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 329/643 (51%), Positives = 446/643 (69%), Gaps = 23/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIG+TG RGLHHLVYEI+DN++DEA AG+ NIEV +
Sbjct: 5 QVYDESQIQVLEGLEAVRKRPGMYIGTTGIRGLHHLVYEIVDNSIDEALAGFCQNIEVLI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DN I P+ +HP K +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 65 HKDNCITVKDDGRGMPVGIHPKMKKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS+ V V RDG + Q Y +GK V+ LT V D GT + F PD ++F
Sbjct: 123 VVNALSKECNVEVRRDGHIWSQNYKKGKVVSELTI----VGDTDEHGTSVYFKPDDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++FD++T+A R+RELAFLN + I L E E+ +E+ + GG++ +V +LN +K
Sbjct: 179 -EVEFDYSTLAQRLRELAFLNKGIKIILVDEREGNERR--DEFHYEGGIKSFVSFLNRNK 235
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + + + D +++ LQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR
Sbjct: 236 QTLHAEPIYVEGNKDDYLVEVGLQY-NDTYNENIFSFANNIDTVEGGTHLAGFKTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
LN ++ +K+ D +LSG+ REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 LNDYARRYGFLKENDKNLSGDDTREGLTAVISVKLTDPQFEGQTKTKLGNTEVRGIVDSI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E ++ +LE +PD ++ KSL+A +A AAK+AR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VSERVSIFLEENPDTAKIVIEKSLTAARAREAAKKARELTRRKSVLESTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE++ + +++I+ +I
Sbjct: 415 KDPSECEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKIMNVEKQRLDKILNSDQIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF E +RYH+III+TDADVDGAHI TLLLTFFYRY + L D G +Y+ P
Sbjct: 475 AFGAGI-GKDFDIEKIRYHRIIIMTDADVDGAHIATLLLTFFYRYMRELVDGGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V++GK V Y Y D EL++V + + IQR+KGLGEM QLW+TT+NPE R
Sbjct: 534 PLYQVKKGKSVNYAYSDNELQEVLAQIGGKDKNTEIQRYKGLGEMDAGQLWDTTMNPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L ++ I+DA A+ VF+ LMG +V+ R+E I +NA +VNLD
Sbjct: 594 TLVKVTIDDAMRADEVFTILMGDKVEPRREFIEENAKKVVNLD 636
>gi|429726067|ref|ZP_19260877.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
gi|429148108|gb|EKX91121.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
Length = 661
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/658 (48%), Positives = 438/658 (66%), Gaps = 37/658 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE +DN++DEA AGY ++IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTICK 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D+H SAL+ V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSIIVQDNGRGIPVDIHEKEGVSALQVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS ++ V+RDG Y Q+YS GKP+ + V DR+GTR +FWPD ++FTT
Sbjct: 129 NALSTHMKSQVFRDGKIYQQEYSAGKPLYDVKV----VGQTDRRGTRQQFWPDPEIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
+ ++ +A R+RELAFLN LTI L E + D +E F++ GL E+V++ ++ +
Sbjct: 185 T-YRYDILANRMRELAFLNAGLTITLTDEREIDENGKPLSETFYSEQGLREFVRYQDSMR 243
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
PL DV+ + +GI +++A+ + + +YS+ + Y N+I TI+GGTH+ G ++++TR
Sbjct: 244 NPLIPDVIYINTEKEGIPVEVAIVYNT-SYSENLHSYVNNINTIEGGTHLAGFRSAVTRV 302
Query: 365 LNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
L +++ K ++ I ++GE REGLT +ISV+V P+FEGQTKT+LGN EV V+
Sbjct: 303 LKKYAEETAQKQIEKAKIEITGEDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
Q+V E LT YLE HP I+ K + A A +AA++AR+ V++K+ + LPGKLADC
Sbjct: 363 QAVGEALTYYLEEHPKEAKLIVDKVILAATARVAARKARETVQRKNPMSGGGLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE E+F+VEGDSAGGSAKQGR R QAILPLRGKILNVE+ ++++E+ N+
Sbjct: 423 SSKVPEECELFLVEGDSAGGSAKQGRSRATQAILPLRGKILNVEKAMWHKAFESDEVNNI 482
Query: 543 IRALGL-------GVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
I+ALG+ G GE KEA LRYHKI+I+ DADVDG HI TL++T FYRY
Sbjct: 483 IQALGIRFGVQKEGETGEVDSKEANIDKLRYHKIVIMADADVDGQHIATLIMTLFYRYFP 542
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGE 647
+ E +Y+ +PPLY+ +GK +YCY+D E ++K ++QR+KGLGE
Sbjct: 543 QVIRENHLYIAMPPLYRCRKGKTEEYCYNDREKDAFIEKYGDPTKGENSITLQRYKGLGE 602
Query: 648 MMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M P QLW+TT+NPE RMLK + IE+AAEA+ +FS LMG V+ R++ I+ A +D
Sbjct: 603 MNPTQLWDTTMNPETRMLKLVTIENAAEADHIFSMLMGDDVEPRRDFIERNAKYATID 660
>gi|452207169|ref|YP_007487291.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
gi|452083269|emb|CCQ36556.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
Length = 639
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/633 (50%), Positives = 433/633 (68%), Gaps = 18/633 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAV+KRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV +
Sbjct: 7 YSAGQIQVLEGLEAVQKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCDAIEVRINE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVVDDGRGIPVDTHEEYDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ LEV + RDG + ++ G+P + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSKWLEVEIKRDGAVWRHRFDHGEPEADIE-RVREMNPGEGTGTEIRFWPDGDIFETT 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F+++T+ R+RELAFLNP + IALR E SD N EY GG+ E+V +LN ++
Sbjct: 184 -AFEYSTLESRLRELAFLNPGVEIALRDERSDEGTNSVFEY--EGGIREFVAYLNETREL 240
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH D+V D D I +++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 241 LHEDIVYVEDDADDIHVEIAMQ-ATAGVQGSIHAFANNINTREGGTHLTGFKTALTRIIN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN +VR +V+ +V
Sbjct: 300 DYAGSNGLLSDLDGTLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVEGAVH 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L YLE HPD ++I+SK++ A KA AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 360 EKLATYLEEHPDTAEAIVSKAVEAAKARKAAKKAEELTRRKSALESTSLPGKLADCRERS 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE++E+F+ EGDSAGGSAKQGR+ FQAILP+RGKILNVE+ + +N EI+NLI A+
Sbjct: 420 PEDAELFVTEGDSAGGSAKQGRNPEFQAILPIRGKILNVEKHRLDRILENNEIRNLITAI 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F EA RYHK+I+L DADVDGAHIRTLLLTF YR+ L + G +Y PPL
Sbjct: 480 GTGI-GEEFDIEAARYHKVILLCDADVDGAHIRTLLLTFLYRHMTPLIEAGYVYAAQPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y++ + +AE ++V + +QRFKGLGEM P QLWETT++P+ R+LK
Sbjct: 539 YRIRYNGETYDAMTEAEREEVVADVCGGDPDQVQRFKGLGEMNPEQLWETTMDPDNRILK 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
++ +EDAA A+ +FS LMG V RK+ I++ A
Sbjct: 599 RITVEDAAAADRMFSVLMGDAVGPRKQFIKDHA 631
>gi|229083320|ref|ZP_04215682.1| DNA gyrase subunit B [Bacillus cereus Rock3-44]
gi|228699995|gb|EEL52618.1| DNA gyrase subunit B [Bacillus cereus Rock3-44]
Length = 640
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 329/642 (51%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I VA+
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVAIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D GT RF PD ++F
Sbjct: 129 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDHTGTITRFKPDPEIFKET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++D +T+A R+RELAFLN KLTI ++E+ Q E+ + GG++ YV+ LN K
Sbjct: 185 TEYDFDTLATRMRELAFLNRNIKLTIEDKRENK-----QKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEYGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ S P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKVQQGKKIQYAYNDKELEKILSELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|374321361|ref|YP_005074490.1| DNA gyrase subunit B [Paenibacillus terrae HPL-003]
gi|357200370|gb|AET58267.1| DNA gyrase subunit B [Paenibacillus terrae HPL-003]
Length = 636
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 330/644 (51%), Positives = 438/644 (68%), Gaps = 29/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY +I+V +
Sbjct: 7 SYDAGEIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVH 66
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+ H KSALE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 67 EDNSVTVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P V + D GT+ F+PD Q+FT
Sbjct: 125 VNALSSKMIVHVKRDGHMYEQEYHRGVP----QYDVRVIGDTDETGTQTTFYPDDQIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D+ T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 181 TTVYDYETLQTRIRELAFLNKGIAISL----TDERTGASDMFHYEGGISEYVQFLNQKRE 236
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 237 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 292
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +KD +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 293 RIINDYARKNGFIKDNTANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 352
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 353 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 412
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + ++EI+++
Sbjct: 413 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSM 472
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
+ A+G G+ G+DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + D G +Y+
Sbjct: 473 VTAMGTGI-GDDFDIAKARYHKVIIMTDADVDGAHIRTLLLTFFYRYLRKIIDAGYVYIA 531
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+KVER K V+Y +AE + S F NA Y++QR+KGLGEM QLWETT++PE
Sbjct: 532 QPPLFKVERNKVVRYANSEAERDTIISEFGENAKYNVQRYKGLGEMNATQLWETTMDPES 591
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ I DA A+ +F +LMG V+ R++ IQ A V NLD
Sbjct: 592 RTMLQVTISDAMLADTMFDTLMGDNVEPRRDFIQEHAKYVKNLD 635
>gi|393786129|ref|ZP_10374267.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
gi|392660493|gb|EIY54105.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
Length = 655
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 317/649 (48%), Positives = 434/649 (66%), Gaps = 28/649 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IEV +
Sbjct: 15 SYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTIN 74
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 75 EDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSC 132
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y GKP+ V V + GTR +FWPD +FT
Sbjct: 133 VNALSTHMISQVYRNGKIYQQEYEIGKPLYP----VKEVGESEHTGTRQQFWPDNTIFTE 188
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ + + +AGR+RELA+LN K+T+ R+ +D K + ++ GL+E+V++L +
Sbjct: 189 TV-YKYEILAGRMRELAYLNAGIKITLTDRRVVNDEGKFKQEIFYSEEGLKEFVRYLESS 247
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ L +DV+ + GI I+LA+ + + +S+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 248 RDHLINDVIYLNTEKQGIPIELAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTR 306
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ
Sbjct: 307 TLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQ 366
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L YLE HP I+ K + A A AA++AR++V++KS + LPGKLADCS
Sbjct: 367 AVGEALAYYLEEHPKEAKLIVDKVVLAATARHAARKAREMVQRKSPMSGGGLPGKLADCS 426
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P++ E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ ++EEI+N+
Sbjct: 427 DKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIY 486
Query: 544 RALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ K A LRYHKIII+TDADVDG+HI TL++TFF+RY + G +
Sbjct: 487 TALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYL 546
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWET 656
Y+ PPLY ++GK +YC+ DA+ + ++ NA+++ QR+KGLGEM QLWET
Sbjct: 547 YIATPPLYLCKKGKVEEYCWTDAQRQAFIDTYGGGSENAVHT-QRYKGLGEMNAQQLWET 605
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE RMLKQ+ IE+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 606 TMDPENRMLKQVNIENAAEADFIFSMLMGEDVGPRREFIEENATYANID 654
>gi|448311928|ref|ZP_21501681.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
gi|445603549|gb|ELY57511.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
Length = 643
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/635 (49%), Positives = 433/635 (68%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D+S IP+D H + ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSVSVADDGRGIPVDTHDEYERPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V +++ + GT++RFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGSVHRHAFEGGEPVGDMQ-EVREMNADEETGTQVRFWPDTSIFETE 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
F +T++ R+RELAFLN + I LR +E++D + Y + GG+ E+V++LN +
Sbjct: 184 -GFSFSTLSNRLRELAFLNSGVRITLRDEREETDDGDVVEDTYEYEGGIREFVKYLNETR 242
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD V+ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHDDVIYFEDEAQNIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N K + + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYAKDNDMLGDLETNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD +I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAQAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE +E+FI EGDSAGGSAKQ RD FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 KDPETAELFIAEGDSAGGSAKQARDPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + D E ++ + +QRFKGLGEM P QLWETT+NP+ R+
Sbjct: 541 PLYRIRYRGETYDAMTDTERDEIVAEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPDNRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ +EDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 601 LKQITVEDAAAADKMFSVLMGDAVEPRKQFIKENA 635
>gi|320527132|ref|ZP_08028319.1| DNA gyrase, B subunit [Solobacterium moorei F0204]
gi|320132460|gb|EFW25003.1| DNA gyrase, B subunit [Solobacterium moorei F0204]
Length = 664
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/649 (49%), Positives = 428/649 (65%), Gaps = 28/649 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V+ TY IQVL+GLEAVRKRP MYI ST +GLHHLV+EI+DN +DEA AGYAS + V
Sbjct: 27 VTHTYNDSDIQVLDGLEAVRKRPGMYIASTSSKGLHHLVWEIVDNGIDEAMAGYASTVTV 86
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DN I P +H T KS +ET+ TVLHAGGKFGG + Y VSGGLHGVG
Sbjct: 87 TVDKDNIITVEDDGRGMPTGIHEKTGKSTIETIFTVLHAGGKFGGGA--YKVSGGLHGVG 144
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTL----TCHVLPVDSKDRQGTRIRFW 238
SVVNALS LEVTV+ DG EY+ ++ G PV TL TC D+ G+ +RF
Sbjct: 145 ASVVNALSSWLEVTVFHDGKEYYIRFENGGHPVGTLIEKGTC------PADKHGSTVRFK 198
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
D +FT + ++H+ + R+R+LAFLN + + + E ++ + F GGL++Y
Sbjct: 199 ADPTIFTETVAYEHDILRDRLRQLAFLNKSICLKFNDLREEDEAKRHYVFKFDGGLKQYT 258
Query: 299 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++LN ++ + H+++ I +++A Q+ +D Y+ + + N+I T +GGTH EG
Sbjct: 259 EFLNRNRDVVNHEIIYSEGYESNIQVEVACQY-NDGYNPNIYTFCNNINTAEGGTHEEGF 317
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
+ +L R +N + + +K+KD +L+ + REGLT +ISV+ P+P++EGQTKT+LGN EV
Sbjct: 318 RLALNRVINKYARDTGFLKEKDDNLTTDDCREGLTAVISVKHPDPQYEGQTKTKLGNSEV 377
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
RK+V L YL +PD IL K A +A +AAK+AR+L R+KS L S LPG
Sbjct: 378 RKIVSDIFGTQLERYLMENPDEAKVILEKVALASQARMAAKKARELTRRKSALEVSPLPG 437
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS EI+IVEG SAGGSAKQGRD FQAILPLRGKILNVE+ ++ +Y+N
Sbjct: 438 KLADCSSKDASICEIYIVEGQSAGGSAKQGRDSHFQAILPLRGKILNVEKARQSRIYENA 497
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+++I A G GV E E LRYHKI+I+TDADVDGAHIRTLLLTFFYRY + L ++G
Sbjct: 498 EIRSMITAFGCGVSDE-IDLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRYLRPLLEQG 556
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPLYKV++G+ V+Y Y D +L++VK SIQR+KGLGEM P QLWETT
Sbjct: 557 YIYIAQPPLYKVQKGQTVRYAYTDNQLEEVKRELGDR--LSIQRYKGLGEMNPEQLWETT 614
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++P+ R L ++ + DA A+ F+ LMG V+ RK I +NA NLD
Sbjct: 615 MDPKNRTLIRVAVGDAEAADYNFTMLMGEEVEPRKNFIVENAHFAENLD 663
>gi|404393691|ref|ZP_09319331.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
gi|404278784|gb|EHL17450.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
Length = 641
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/652 (49%), Positives = 451/652 (69%), Gaps = 30/652 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 3 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V++ +N I P+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 63 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 235
HGVG+SVVNALS+SL V ++G Y Q++ G VT + TC + + GT I
Sbjct: 121 HGVGVSVVNALSKSLTAVVKKEGKIYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 174
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD+++F I + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 175 SFLPDEKIFDETI-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 231
Query: 296 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 232 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 290
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 291 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 350
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 351 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 410
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + QAILPLRGKILNVE+
Sbjct: 411 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAILPLRGKILNVEKSRLDKAL 470
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+++ I+N+I A G G+ G ++ + LRYHKIII++DADVDGAHIRTL+LTFF+RY + L
Sbjct: 471 QSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSDADVDGAHIRTLILTFFFRYMRPLI 529
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G +Y+ PPL+ +E+GK+ Y Y EL++ + + + R KGLGEM +L
Sbjct: 530 ENGYVYIAQPPLFSIEKGKKTFYAYSPEELEQKLNEIGRERVL-VSRNKGLGEMDAEELG 588
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+TT++P+ R+L ++ +EDAAEA+ +FS LMG +V+ R++ IQ A V NLD
Sbjct: 589 DTTMDPKNRVLLKVNLEDAAEADEIFSVLMGDKVEPRRDFIQQNARYVENLD 640
>gi|375255406|ref|YP_005014573.1| DNA gyrase subunit B [Tannerella forsythia ATCC 43037]
gi|363408013|gb|AEW21699.1| DNA gyrase, B subunit [Tannerella forsythia ATCC 43037]
Length = 652
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 314/650 (48%), Positives = 429/650 (66%), Gaps = 26/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
SK Y S+ IQVLEGLEAVRKRPAMYIG TG +GLHHLVYE++DN++DEA AG+ NIEV
Sbjct: 10 SKEYSSKNIQVLEGLEAVRKRPAMYIGDTGEKGLHHLVYEVVDNSIDEALAGFCKNIEVV 69
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D H KSALE VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 70 INEDNSICVTDDGRGIPVDYHEKEGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGV 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L+ + R+G Y Q++S+GKP+ + + DR GT I F PD VF
Sbjct: 128 SCVNALSSHLKAEIHRNGKIYIQEFSQGKPLGD----IRETGTIDRTGTIISFKPDDTVF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLN 302
T Q+ ++ +A R+RELAFLN + + L + E + F GL+E+V++++
Sbjct: 184 TVT-QYKYDILANRLRELAFLNAGIYLTLTDKREKKEDGSFKSEVFHSNEGLKEFVRYID 242
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ + HDV+ + GI +++A+ + + +Y++++ Y N I TI+GGTH+ G + L
Sbjct: 243 KSKESMIHDVIHIVTEKQGIPVEVAMTYNT-SYNESVFSYVNDINTIEGGTHLSGFRRGL 301
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTL + SK ++ + + G+ REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 302 TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAV 361
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D +V E L YLE HP +I+ K + A A AA++AR++V++KS LPGKLAD
Sbjct: 362 DMAVGEALGYYLEEHPKEAKAIVDKVILAATARQAARKAREMVQRKSPFSGGGLPGKLAD 421
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS E E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ E ++ +EEIQN
Sbjct: 422 CSSKDAAECELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMEHRIFDSEEIQN 481
Query: 542 LIRALGLGVKGEDFKKE----ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ +A+G+ + ED KE LRY KIII+TDADVDG+HI TL+LTFF+R + L ++G
Sbjct: 482 IFKAMGVTIGTEDDPKELNLSKLRYQKIIIMTDADVDGSHIATLILTFFFRRMRGLIEKG 541
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWE 655
+Y+ PPLY ++GK +YC+ + + +K ++ I QR+KGLGEM QLW+
Sbjct: 542 YVYLATPPLYLCKKGKVEEYCWTEQQRQKFIDTYGGGNESQIHTQRYKGLGEMNDHQLWD 601
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R LKQ+ IE+A EA+ F+ LMG V R++ I+ A N+D
Sbjct: 602 TTMNPENRTLKQITIENAVEADSTFAMLMGEDVAPRRDFIEENATYANID 651
>gi|293497972|ref|ZP_06665826.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424]
gi|291096903|gb|EFE27161.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424]
Length = 644
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 433/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+ + + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y Y+D EL K+KS +SI R+KGLGEM QLWETT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 ALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|189345573|ref|YP_001942102.1| DNA gyrase subunit B [Chlorobium limicola DSM 245]
gi|189339720|gb|ACD89123.1| DNA gyrase, B subunit [Chlorobium limicola DSM 245]
Length = 643
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 320/641 (49%), Positives = 423/641 (65%), Gaps = 27/641 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + IQ+L+G+E VR RPAMYIG RGLHHLVYEI+DN++DE GY I V L
Sbjct: 11 SYLATNIQILDGIEHVRMRPAMYIGDIHTRGLHHLVYEIVDNSIDETLGGYNDYIFVGLN 70
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D S IP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SV
Sbjct: 71 PDGSVTVIDRGRGIPVDIHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASV 128
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE EV V+RDG Y Q+Y RG P V + D +GT+ F PD ++F T
Sbjct: 129 VNALSEWCEVEVYRDGKAYFQRYERGVP----QGDVKEIGPSDLRGTKTTFKPDHEIFKT 184
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK- 305
+F + I R+RELAFLN L I ++ D + E + + GGL E+VQ+ + ++
Sbjct: 185 T-EFRRDIIIDRMRELAFLNKTLRITVQDSDGNEEV-----FHYEGGLNEFVQFTDQNRI 238
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
K L + V + D ++LALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTL
Sbjct: 239 KLLKEPVYIYGERDSTIVELALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTL 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N+ +K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V
Sbjct: 298 NAYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESIV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L E+LE +P+VL I+ K A + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 358 NEQLAEFLESNPNVLKLIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSIN 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I A
Sbjct: 418 DPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG E+F E LRY KIII+TDADVDGAHIRTLLLTFF+RY ++L + G +++ PP
Sbjct: 478 LGTSFGEEEFSPEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
LY V+ GK QY +DD E V S A IQR+KGLGEM P QLW TT++P
Sbjct: 538 LYLVKSGKDQQYAWDDDERNAVIESLRKMQKGKANVHIQRYKGLGEMNPEQLWSTTMDPA 597
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
R L Q+ +E+A EA+ VFS+LMG +V+ R++ I+ A V
Sbjct: 598 HRSLLQVSVENAMEADKVFSTLMGDKVEPRRDFIEKNARYV 638
>gi|432328169|ref|YP_007246313.1| DNA gyrase, B subunit [Aciduliprofundum sp. MAR08-339]
gi|432134878|gb|AGB04147.1| DNA gyrase, B subunit [Aciduliprofundum sp. MAR08-339]
Length = 643
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 329/655 (50%), Positives = 446/655 (68%), Gaps = 42/655 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LE +AVRKRP MYIGST RGLHHL+YE++DN++DEA AGY I V L
Sbjct: 4 YDAKAIQILEDSQAVRKRPGMYIGSTDERGLHHLIYEVVDNSIDEALAGYCKRISVILHG 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE V+TVLHAG KF Y ++GGLHGVG+ VV
Sbjct: 64 DGSVSVEDDGRGIPVDIHPEKGKSALEIVMTVLHAGAKF--DKKAYRITGGLHGVGIHVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLP--VDSKDR-------------QG 232
N LSE L+V V RD Y Q Y RGKP HV+ V+ + R +G
Sbjct: 122 NFLSEWLKVYVKRDEKIYFQWYVRGKP--QCDVHVVGEFVNGQVRWYEAGHEEHFKYPRG 179
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 292
T +RF PD ++F T +F + + ++R+LAFLN + I L D ++ + + G
Sbjct: 180 TYVRFKPDPEIFETT-EFKYGIVKKKLRDLAFLNRGVEIEL----EDERTGKHEVFHYEG 234
Query: 293 GLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
G+ E+V++LN LH DV+ + DGI ++ ALQ+ +D+ S+ ++ + N+I T++GG
Sbjct: 235 GIVEFVKFLNEGYNSLHKDVIYGMDEQDGIIVEFALQY-NDSTSENLIAFVNTINTVEGG 293
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
TH+ G +++LT+ +N K +KD +SL GE VREGLT +I V+ PNP+FEGQTK +
Sbjct: 294 THVSGFRSALTKAINDFAKGKGMLKD--MSLQGEDVREGLTAVIHVKHPNPQFEGQTKAK 351
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN EV+ VV V L+ Y E HPDV +I++K+++A +A +AA++AR+L R+K+ L
Sbjct: 352 LGNSEVKGVVFSVVNRILSTYFEEHPDVATNIVTKAIAAARARIAARKARELARRKNYLE 411
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
S LPGKLADC+S PEE+E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+
Sbjct: 412 SLDLPGKLADCTSEDPEEAELFIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARID 471
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
++KN EI+ LI A+G GV+ EDF LRYHKIII+TDADVDGAHIRTLLLTFFYRY
Sbjct: 472 KVFKNNEIRALISAIGTGVR-EDFDYSKLRYHKIIIMTDADVDGAHIRTLLLTFFYRYMP 530
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 651
L + G +Y+ PLY+++RGK++ Y Y D E +++ +P NA S+QRFKGLGEM P
Sbjct: 531 ELIERGHVYIAQAPLYRIQRGKEIYYVYSDEEKEEMLKKYP-NA--SVQRFKGLGEMNPQ 587
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
QLWETT++PE+R L ++ IEDAAEA+ +FS LMG V+ R+E +I++A ++N+D
Sbjct: 588 QLWETTMDPEKRRLIRVTIEDAAEADRLFSILMGEAVEPRREFIIEHAREVMNID 642
>gi|326390355|ref|ZP_08211914.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392940031|ref|ZP_10305675.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
gi|325993632|gb|EGD52065.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392291781|gb|EIW00225.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
Length = 633
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 442/643 (68%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G Y Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVIVKQHGKIYRQIYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ FD++ +A R+RELAFLN + I L E E+ + + GG+ +V++LN +K
Sbjct: 179 ETV-FDYDVLAQRLRELAFLNKGINIKLIDERHGKEE----VFNYEGGIISFVKYLNRNK 233
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHEEPIYMEAKNSD-YEVEVCMQY-NDSYNENIFSFANNIDTREGGTHLVGFKAALTK 291
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVTEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKSGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG GV G DF LRYHKI+I+TDADVDG+HIRTLLLTFFYR+ + L + G +++
Sbjct: 472 TALGTGV-GNDFDISKLRYHKIVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVFIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL K+ + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 531 PPLYKITKGKKVYYAYSDRELDKILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 TMLKVTLEDAIAADEIFTILMGDKVEPRREFIEKYAKTVRNLD 632
>gi|257457903|ref|ZP_05623062.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
gi|257444616|gb|EEV19700.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
Length = 638
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/646 (48%), Positives = 433/646 (67%), Gaps = 25/646 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y +E I VL+GL+AVRKRP MYIGSTGP GLHHLVYE++DN +DEA AGY I V
Sbjct: 3 TPSYSAENITVLKGLDAVRKRPGMYIGSTGPDGLHHLVYEVVDNCIDEAMAGYCDTILVV 62
Query: 134 L-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L + DN IP+D+HP SALE VLT LHAGGKF S Y VSGGLHGVG+
Sbjct: 63 LEKNDTVRVEDNGRGIPVDIHPEEGVSALELVLTRLHAGGKFDKGS--YKVSGGLHGVGV 120
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS S+E V RDG EY QK++ G+P+ +T ++GT IR+ D +F
Sbjct: 121 SVVNALSTSMEAIVCRDGFEYVQKFALGEPLGPVTKR----GETQKRGTTIRWTADPSIF 176
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNT 303
T ++ + +A R+RELAFLN + I LR E S P++ + F GGL +V++LN
Sbjct: 177 TETTTYNFDVLAVRLRELAFLNNTIKITLRDERLSTPKEVTFA---FDGGLSHFVRYLNE 233
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ L + + F + + + +++A+Q+ +D Y + +L + N I T +GGTH+EG K +LT
Sbjct: 234 SKQVLPKEPIYFEGEKNDVVVEIAMQY-NDGYKENILSFVNDINTREGGTHLEGFKTALT 292
Query: 363 RTLNSLGKKSKTVK---DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
R +N KK+ + +K+ L GE VR GLT ++SV+VP P+FEGQTKT+LGN EVR
Sbjct: 293 RVMNEFLKKNAKLSKKMEKEEKLMGEDVRAGLTAVLSVKVPEPQFEGQTKTKLGNSEVRS 352
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD + E LT + E +P +D IL K++ A +AA++A++ R+KS L S LPGKL
Sbjct: 353 IVDTFINEKLTLFFEQNPIEIDKILEKAVGEATARIAARKAKEATRRKSGLDSFGLPGKL 412
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS PE+ E++IVEGDSAGGSAK+GRD + QAILPL GK+LNVE+ + NE++
Sbjct: 413 ADCSSKDPEKCEVYIVEGDSAGGSAKKGRDSKTQAILPLWGKMLNVEKTRLDKVLNNEKL 472
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q +I LG G+ GEDF + +RYHKIII+ DADVDG+HIRTLLLTFF+RY L + G +
Sbjct: 473 QPIIATLGTGI-GEDFNLDKIRYHKIIIMADADVDGSHIRTLLLTFFFRYMPELIEHGFV 531
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLYK+ K+ Y YDD+E + + + ++QR+KGLGEM QLWETT++
Sbjct: 532 YLAMPPLYKISYNKKEWYVYDDSERDSILNEIGRSVSPAVQRYKGLGEMDGTQLWETTMD 591
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P +R + ++ + DA EA+ +FS+LMG V+ R++ I+ A NLD
Sbjct: 592 PARRKMMRVTLSDAVEADRIFSTLMGEEVEPRRKFIEENAVYANLD 637
>gi|363890517|ref|ZP_09317846.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
gi|361965108|gb|EHL18101.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
Length = 641
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/652 (49%), Positives = 450/652 (69%), Gaps = 30/652 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 3 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V++ +N I P+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 63 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 235
HGVG+SVVNALS+SL V ++G Y Q++ G VT + TC + + GT I
Sbjct: 121 HGVGVSVVNALSKSLTAVVKKEGKVYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 174
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD+++F + + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 175 SFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 231
Query: 296 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 232 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 290
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 291 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 350
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 351 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 410
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + QAILPLRGKILNVE+
Sbjct: 411 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAILPLRGKILNVEKSRLDKAL 470
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+++ I+N+I A G G+ G ++ + LRYHKIII++DADVDGAHIRTL+LTFF+RY + L
Sbjct: 471 QSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSDADVDGAHIRTLILTFFFRYMRPLI 529
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G +Y+ PPL+ +E+GK+ Y Y EL++ + + + R KGLGEM +L
Sbjct: 530 ENGYVYIAQPPLFSIEKGKKTFYAYSSEELEQKLNEIGRERVL-VSRNKGLGEMDAEELG 588
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+TT++P+ R+L ++ +EDAAEA+ FS LMG +V+ R++ IQ A V NLD
Sbjct: 589 DTTMDPKNRVLLKVNLEDAAEADETFSILMGDKVEPRRDFIQQNARYVENLD 640
>gi|359409915|ref|ZP_09202380.1| DNA gyrase, B subunit [Clostridium sp. DL-VIII]
gi|357168799|gb|EHI96973.1| DNA gyrase, B subunit [Clostridium sp. DL-VIII]
Length = 635
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 336/644 (52%), Positives = 445/644 (69%), Gaps = 26/644 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST PRGLHHLVYEI+DN++DEA AGY IEV
Sbjct: 5 NREYDENQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEIVDNSIDEALAGYCKKIEVY 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP KS +E ++T+LHAGGKFGG S LHGVG
Sbjct: 65 INEDNSITVTDDGRGMPVGIHPKMGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE VTV RDG + QKYS+GK +T +T + + D GT F PD +F
Sbjct: 123 SVVNALSEECTVTVKRDGHIWEQKYSKGKVLTEVT----QIGNSDETGTETYFKPDAGIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I FD ++ R+RELAFLN + I L D EK + + + GG++ +V +LN +
Sbjct: 179 D-EIVFDFEVLSQRLRELAFLNKGIYIKLV--DKRDEKEEI--FHYEGGIKSFVSYLNRN 233
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K PLHD + + V D I +++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR
Sbjct: 234 KVPLHDEPIYIEGVKDNIAVEVALQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTR 292
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N KK +K+ D + +G+ +REGLT +ISV++ P+FEGQTKT+LGN EVR +VD
Sbjct: 293 VFNDYAKKFGHIKENDKNFTGDDIREGLTAVISVKIEEPQFEGQTKTKLGNSEVRGIVDS 352
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E + +LE +P++ I+ K+L A +A AA++AR+L R KSVL ++LPGKLADCS
Sbjct: 353 VVGENVGTFLEENPNIGKMIVDKALMAARARDAARKARELTR-KSVLERTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P E EI+IVEGDSAGGSAKQGR+RRFQAILPLRGKILNVE++ + + I+++I
Sbjct: 412 SKDPRECEIYIVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKQRLDRILNADTIRSMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF E +RY++III+TDADVDGAHIRTLLLTFFYRY + L D+G +Y+
Sbjct: 472 TAFGAGI-GNDFAVEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRELIDDGHVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV +GK+ Y Y DAEL+ V S F + IQR+KGLGEM QLW+TT++PE+
Sbjct: 531 PPLYKVSKGKKEHYAYSDAELESVLSDFGGKDNSTDIQRYKGLGEMNANQLWDTTMDPEK 590
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ I+DA A+ +F+ LMG +V+ RKE I QNA +VNLD
Sbjct: 591 RILLKVNIDDAMAADEIFTILMGEKVEPRKEFIQQNAKKVVNLD 634
>gi|293370455|ref|ZP_06617008.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
gi|292634447|gb|EFF52983.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
Length = 652
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/653 (48%), Positives = 439/653 (67%), Gaps = 28/653 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA A Y +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALASYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDGT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++EI
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + ++ KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQVIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM Q
Sbjct: 540 NGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 LWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|239616758|ref|YP_002940080.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
gi|239505589|gb|ACR79076.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
Length = 631
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 440/647 (68%), Gaps = 38/647 (5%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y ++ I++L+GLE VR+RP MYIGSTG GLHHL+YE++DN++DE GY I++
Sbjct: 1 MSTDYNAQSIKILKGLEPVRQRPGMYIGSTGKAGLHHLIYEVVDNSIDEVVGGYCDYIKI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IP+D+HP T SALE V+T LHAGGKF S Y +SGGLHGVG
Sbjct: 61 TIFEDGSVSVWDNGRGIPVDIHPETGTSALEVVMTTLHAGGKF--SKDSYKISGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EV V+RDG Y Q+Y RGKP T + + D++G+ + F PD V
Sbjct: 119 VSVVNALSEWMEVKVYRDGKIYRQRYERGKPTTPVEI----IGETDKRGSLVAFKPDSLV 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE---YFFAGGLEEYVQW 300
FTT FD + + R +ELAFLNP++TI E +Y+E + F GG+ E+V++
Sbjct: 175 FTTT-DFDFDILESRFKELAFLNPRVTIEF-------EDRRYDEKRVFHFEGGIVEFVKY 226
Query: 301 LN-----TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
LN +K+P + + G DV I LA+Q+ ++AY + +L + N+I+T++GGTH+
Sbjct: 227 LNRKKTAINKEPFY-IEGTYNDV---KIQLAMQY-TNAYDENILTFVNNIKTVEGGTHLT 281
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K LT+ +N +K +KDKD +L GE VREGLT ++SV V P+FEGQTK +LGN
Sbjct: 282 GFKTVLTKMMNDYARKLNVLKDKDPNLQGEDVREGLTAVLSVFVKEPQFEGQTKAKLGNE 341
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EV + V + +++ L E + H L +I+ K+L A KA +AAK+AR+++R+K+ L +++L
Sbjct: 342 EVYEAVIKVLRDKLPEVFDYHTKELKAIIIKALDAAKARVAAKKAREMIRRKNALENTTL 401
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADC+ST E +E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ + K
Sbjct: 402 PGKLADCTSTDLETTELFIVEGDSAGGSAKQARDREFQAILPLRGKILNVEKSSFEKLLK 461
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
NE+I N+I A+G G+ G+D K E LRY KIII+TDADVDGAHIRTLLLT FYRY L +
Sbjct: 462 NEQINNIIVAIGTGI-GDDCKLENLRYGKIIIMTDADVDGAHIRTLLLTLFYRYMTPLIN 520
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G IY+ PLYKVE ++ Y Y D EL++ + + SIQR+KGLGEM P QLWE
Sbjct: 521 AGHIYIAQAPLYKVELNRKKYYFYSDEELEEFLKNNDGKKV-SIQRYKGLGEMNPDQLWE 579
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
TT+NPE R L ++ +ED EA+ VF+ LMG+ V+ R+E I+ A ++
Sbjct: 580 TTMNPESRKLIKIEMEDVEEADRVFTILMGSEVEERREFIERHALMI 626
>gi|448329984|ref|ZP_21519278.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
gi|445613172|gb|ELY66882.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
Length = 643
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 315/635 (49%), Positives = 436/635 (68%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V R+G + + G+PV + V ++ + GT+IRFWPD +F T
Sbjct: 125 NALSERLEAKVKRNGAVFRHAFEAGEPVGDME-RVRDMEPDEETGTQIRFWPDTGIFETG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR E D+D ++ Y + GG+ E+V++LN +
Sbjct: 184 -EISFSTLSNRLRELAFLNSGVRITLRDERVDTDDDEPVAETYEYDGGIREFVEYLNETR 242
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+H D++ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHEDIIYFEDEEQNIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +LSGE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYANENDLLSDLDNNLSGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD +I+ K++ A KA +AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAQAIVMKAVEAAKARMAAKKAEELTRRKSALDSTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PEE+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 KEPEEAELFIAEGDSAGGSAKQARNPEFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE ++ +QRFKGLGEM P QLW+TT++P+ R+
Sbjct: 541 PLYRIRYRGETYDAMTEAERDQIVEEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 635
>gi|256419449|ref|YP_003120102.1| DNA gyrase subunit B [Chitinophaga pinensis DSM 2588]
gi|256034357|gb|ACU57901.1| DNA gyrase, B subunit [Chitinophaga pinensis DSM 2588]
Length = 659
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 317/656 (48%), Positives = 431/656 (65%), Gaps = 30/656 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P S Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY NI
Sbjct: 11 PASSGYDAGSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDEALAGYCKNIS 70
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P +HP +SALE V+TVLHAGGKF ++ Y VSGGLHGV
Sbjct: 71 VTICEDNSILVTDDGRGIPTGMHPKEGRSALEVVMTVLHAGGKFDKNT--YKVSGGLHGV 128
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS+ L VTV R+G + Q+Y RG P V + + D GT + F PD +
Sbjct: 129 GVSCVNALSDKLHVTVRREGKLFEQEYQRGVP----QYAVREIGTSDSTGTTVHFKPDNE 184
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQW 300
+F I ++ +AGR+RELA+LN K+ I L + + D N E F++ GG+ E+VQ
Sbjct: 185 IFKETI-YNREILAGRLRELAYLNRKIKITLTDDREKDEAGNSVTETFYSEGGIIEFVQM 243
Query: 301 LNTDKK-----PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
L+ + + P + + +++A+ + +D++S+ + Y N+I TI+GGTH+
Sbjct: 244 LDRNGRRNGLLPDPIFIEAHDASSNVAVEVAVIY-NDSFSENIFSYVNNINTIEGGTHVA 302
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G + ++TR S G K+K + I ++G+ REGL+ IISV+VP P+FEGQTKT+LGN
Sbjct: 303 GFRRAITRIFKSYGDKNKMFEKTKIEVTGDDFREGLSAIISVKVPEPQFEGQTKTKLGNS 362
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
+V VVD SV L YLE HP I++K + A +A AA++AR +V++KSVL S L
Sbjct: 363 DVMGVVDSSVAAVLDAYLEEHPREAKIIINKVVLAAQAREAARKARQMVQRKSVLSGSGL 422
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS PE+ E+++VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ E +Y+
Sbjct: 423 PGKLADCSENDPEKCELYLVEGDSAGGTAKQGRNRSFQAILPLRGKILNVEKAMEHKIYE 482
Query: 536 NEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
NEEI+N+ ALG+ + E+ K LRYHK+II+TDADVDG+HI TL+LTF +RY K
Sbjct: 483 NEEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFIFRYMK 542
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS--IQRFKGLGEMM 649
+ ++G +Y+ PPLY V++ K+ Y + + + K + S IQR+KGLGEM
Sbjct: 543 AMVEQGYVYIAQPPLYLVKKSKEQIYAWTEEDRKAAIAKIAGGKEDSVTIQRYKGLGEMN 602
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NP+ R LKQ+ IE AAEA+ VFS LMG V R+E I++ A +D
Sbjct: 603 AEQLWETTMNPDNRTLKQVTIESAAEADRVFSMLMGDEVPPRREFIESHAKYAKID 658
>gi|241889819|ref|ZP_04777117.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
gi|241863441|gb|EER67825.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
Length = 638
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/646 (49%), Positives = 442/646 (68%), Gaps = 21/646 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN ++ Y ++QIQVLEGLEAVR RP MYIGST +GLHHLV+EI+DN++DEA AGY +
Sbjct: 3 ENKKTQEYNADQIQVLEGLEAVRVRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCNT 62
Query: 130 IEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I VA+ + DN IP+D+ T K ALE +LTVLHAGGKFGG S LH
Sbjct: 63 ITVAIEEGNWIRVEDNGRGIPVDIQEQTGKPALEVILTVLHAGGKFGGGGYKVSGG--LH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALS +LE +V RDG Y K+ RG V +T + DR GT IRF D
Sbjct: 121 GVGASVVNALSTNLEASVHRDGKIYSMKFERGDVVQGITV----IGDTDRTGTTIRFKAD 176
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++F ++++ + RIRELAFLN +TI L+ E EK + + + GGL EYV+
Sbjct: 177 PEIFQETTVYEYDILRTRIRELAFLNKGITIILKDERIGQEKEE--TFCYEGGLLEYVEM 234
Query: 301 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
LN +K LH+ + ++DG +++++Q+ + YS+ +L YAN+I T +GGTH G K +
Sbjct: 235 LNENKDALHEAIYVHGEMDGKEVEISMQYNT-GYSNNVLSYANNINTHEGGTHESGFKTA 293
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +NS GKK+K +KDK+ SL+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ +
Sbjct: 294 LTRIINSYGKKNKLIKDKE-SLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTI 352
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
++ E L +L +P I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLA
Sbjct: 353 TNKLFSEELDRFLLENPKTAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLA 412
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS E E+F+VEGDSAGGSAK GR+ +FQAILPL+GKILNVE+ + N+E++
Sbjct: 413 DCSSKDAAECELFLVEGDSAGGSAKLGRNSKFQAILPLKGKILNVEKVRIDKVLANDEVR 472
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+LI A+G+G+ GE + LRYHKI+I+TDADVDG+HIRTLLLTFF+RY + L D G +Y
Sbjct: 473 SLITAIGMGI-GETLNIDKLRYHKIVIMTDADVDGSHIRTLLLTFFFRYMRELIDAGYVY 531
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLY ++ GK+ YC+ + ELK+ + Y++QR+KGLGEM +LW+TT++P
Sbjct: 532 IARPPLYGLKVGKKEFYCHTEEELKQNIEEHAGDKKYTVQRYKGLGEMNAEELWDTTMDP 591
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
E R++ Q+ + DA A+ F +LMG +V+ R++ I+ NA N++NLD
Sbjct: 592 EHRLMYQVSVNDAQRADAAFDTLMGEKVEPRRKFIEDNALNVINLD 637
>gi|154249648|ref|YP_001410473.1| DNA gyrase subunit B [Fervidobacterium nodosum Rt17-B1]
gi|154153584|gb|ABS60816.1| DNA gyrase, B subunit [Fervidobacterium nodosum Rt17-B1]
Length = 650
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/645 (49%), Positives = 438/645 (67%), Gaps = 27/645 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQVL+GLE VR+RP MYIGSTG GLHHLVYEI+DN++DEA G+ I+V + +
Sbjct: 21 YNAQNIQVLKGLEPVRQRPGMYIGSTGKNGLHHLVYEIVDNSIDEALQGFCDTIKVTIKS 80
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP T SALE V+T LHAGGKF S S Y VSGGLHGVG SVV
Sbjct: 81 DGSVEVEDNGRGIPVDIHPETGTSALEVVMTTLHAGGKF--SKSSYKVSGGLHGVGASVV 138
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +EV V RDG Y Q+Y+RG T V + +++GT +RF PDK +FTT
Sbjct: 139 NALSEWMEVEVHRDGKIYRQRYARG----VKTTEVEVIGETNKRGTIVRFKPDKLIFTTT 194
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +TI R+R+LAFLNP +TI E +D ++ + +AGGL+E++ LN K
Sbjct: 195 -EFDSDTILTRLRDLAFLNPSITIEFVDERNDIKRTLH----YAGGLKEFIAHLNKGSKT 249
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+VV + +A Q+ +D +T++ + N+I+TIDGGTH+ G K + TR +N
Sbjct: 250 LHEVVVIDGSQQDCEVHIAFQY-TDEDGETIVSFVNNIKTIDGGTHVTGFKTAFTRVVNE 308
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISV-RVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
LGKK +K + GE +REG+T +++V + P+FEGQTK++LGN E++ V + V+
Sbjct: 309 LGKKKNLIKGE--PFKGEDLREGMTAVVNVLMMGTPQFEGQTKSKLGNEEIQDAVAKVVR 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ LT+Y E++ VL I+ K+ A +A AAKRAR+ V++KS L +S+LPGKLADC +
Sbjct: 367 DKLTDYFEVNETVLKIIIQKAQQAREAREAAKRAREAVKRKSALGASTLPGKLADCITKN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
EE+E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ E + KNE+++++I A+
Sbjct: 427 FEEAELFIVEGDSAGGSAKQARDRNFQAILPLRGKILNVEKSSELKLLKNEQVKDIIMAI 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GE+F LRY KI+I+TDADVDGAHIRTLLL FYRY + L +E IY+ +PPL
Sbjct: 487 -GGGIGENFDTSKLRYGKIVIMTDADVDGAHIRTLLLALFYRYMRQLIEEERIYIAMPPL 545
Query: 607 YKVE-RGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
YK+ G++ Y Y D EL + + + +N Y +QR+KGLGEM P QLWETT+NP+ R
Sbjct: 546 YKLSISGEKPMYLYSDEELNEMINIAKQNNKRYEVQRYKGLGEMNPEQLWETTMNPKTRK 605
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
+ ++ IEDA EA+ +F LMG + R+E I A ++L LD+
Sbjct: 606 IIKVKIEDAEEADSLFEILMGKDPEERREYIMRHARQLSLVDLDV 650
>gi|229014660|ref|ZP_04171774.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048]
gi|229170197|ref|ZP_04297883.1| DNA gyrase subunit B [Bacillus cereus AH621]
gi|423490641|ref|ZP_17467323.1| DNA gyrase subunit B [Bacillus cereus BtB2-4]
gi|423496365|ref|ZP_17473009.1| DNA gyrase subunit B [Bacillus cereus CER057]
gi|423496841|ref|ZP_17473458.1| DNA gyrase subunit B [Bacillus cereus CER074]
gi|423513056|ref|ZP_17489586.1| DNA gyrase subunit B [Bacillus cereus HuA2-1]
gi|423520150|ref|ZP_17496631.1| DNA gyrase subunit B [Bacillus cereus HuA2-4]
gi|423595333|ref|ZP_17571363.1| DNA gyrase subunit B [Bacillus cereus VD048]
gi|423597250|ref|ZP_17573250.1| DNA gyrase subunit B [Bacillus cereus VD078]
gi|423659655|ref|ZP_17634824.1| DNA gyrase subunit B [Bacillus cereus VDM022]
gi|423671041|ref|ZP_17646070.1| DNA gyrase subunit B [Bacillus cereus VDM034]
gi|423672736|ref|ZP_17647675.1| DNA gyrase subunit B [Bacillus cereus VDM062]
gi|228613298|gb|EEK70437.1| DNA gyrase subunit B [Bacillus cereus AH621]
gi|228746671|gb|EEL96560.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048]
gi|401149547|gb|EJQ57018.1| DNA gyrase subunit B [Bacillus cereus CER057]
gi|401156743|gb|EJQ64146.1| DNA gyrase subunit B [Bacillus cereus HuA2-4]
gi|401163261|gb|EJQ70608.1| DNA gyrase subunit B [Bacillus cereus CER074]
gi|401222009|gb|EJR28611.1| DNA gyrase subunit B [Bacillus cereus VD048]
gi|401238782|gb|EJR45214.1| DNA gyrase subunit B [Bacillus cereus VD078]
gi|401294535|gb|EJS00163.1| DNA gyrase subunit B [Bacillus cereus VDM034]
gi|401304283|gb|EJS09840.1| DNA gyrase subunit B [Bacillus cereus VDM022]
gi|401311250|gb|EJS16557.1| DNA gyrase subunit B [Bacillus cereus VDM062]
gi|402428986|gb|EJV61077.1| DNA gyrase subunit B [Bacillus cereus BtB2-4]
gi|402446099|gb|EJV77962.1| DNA gyrase subunit B [Bacillus cereus HuA2-1]
Length = 642
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG P L + DR G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++FT +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|423613637|ref|ZP_17589497.1| DNA gyrase subunit B [Bacillus cereus VD107]
gi|401241702|gb|EJR48089.1| DNA gyrase subunit B [Bacillus cereus VD107]
Length = 642
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 444/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + DR G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGETDRTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P++ IQR+KGLGEM
Sbjct: 525 MRQIIEYGYIYIAQPPLFKVQQGKKIQYAYNDRELEKILAELPAHPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|347541857|ref|YP_004856493.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346984892|dbj|BAK80567.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 639
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/645 (50%), Positives = 439/645 (68%), Gaps = 31/645 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDQISITINK 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ HP KS LE ++TVLHAGGKF G+ GY +SGGLHGVG SVV
Sbjct: 69 DNSILISDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNGN--GYKISGGLHGVGASVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE V V R G Y Q+YSRGKP+ V V GT F PDK++FT
Sbjct: 127 NALSEKCYVKVKRGGDIYFQEYSRGKPID----DVKKVGRTTENGTETFFIPDKEIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+++D + ++ R+RELAFLN + I+L D +N +F+ GG++E+V+ +N K+
Sbjct: 183 VEYDFDVLSQRLRELAFLNAGIRISLIDLRFDKSEN----FFYIGGVKEFVKHINKGKEC 238
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L D V+ F + + + +A+Q+ +D+Y++ +L Y N+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFDDVIYFEHSKNDLNLQIAMQY-TDSYNENVLTYVNNIFTQEGGTHLIGFKTSLTRCVN 297
Query: 367 SLGKKSKTVK----DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
KK +K D+ SL GE +REGL C++SV++PNP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKEHNKDEIKSLIGEDIREGLVCVLSVKIPNPQFEGQTKTKLGNSEVRSIVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+E+L +P++ + K++ A KA AAK+AR+ R KSVL +SLPGKLADC
Sbjct: 358 SIFFNCFSEFLNENPNIGKIVCEKAIIAAKAREAAKKARETTR-KSVLDRTSLPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE EI+IVEGDSAGGSAKQGRDR+FQAILPL GKI+NVE++ + +E I+ +
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAILPLAGKIMNVEKQRIFKILSSETIRCM 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F +RY++II++TDADVDG+HIRTLLLTF YRY + ++G +Y+
Sbjct: 477 ITAFGCGI-GQEFDVNKIRYNRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLYKV K+ YCY + EL K+K SN + IQR+KGLGEM P QLWETT+NPE
Sbjct: 536 RPPLYKVTESKKEFYCYTEEELNLKLKEINKSNLI--IQRYKGLGEMNPSQLWETTMNPE 593
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA-NLVNLD 705
R L ++ IE A+ A+ +FS LMG +V+ R+E I+N A ++ NLD
Sbjct: 594 TRTLLRVTIEHASYADEIFSILMGDKVEPRREFIRNNARDVKNLD 638
>gi|433443705|ref|ZP_20408961.1| DNA gyrase, B subunit [Anoxybacillus flavithermus TNO-09.006]
gi|432001978|gb|ELK22841.1| DNA gyrase, B subunit [Anoxybacillus flavithermus TNO-09.006]
Length = 637
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/641 (51%), Positives = 440/641 (68%), Gaps = 24/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AG+ + I V +
Sbjct: 8 YDESQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGFCTEINVIVEE 67
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +H + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 68 DNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPV-DSKDRQGTRIRFWPDKQVFTT 246
NALSE LEV V RDG ++QK P+ + C L V DR GT I F PD ++FT
Sbjct: 126 NALSEELEVYVHRDGNIHYQK-----PIPCVPCSDLQVVGETDRTGTMIHFKPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D++T+A R+RELAFLN + I L ED EK + NEY++ GG+ YV+ LN K+
Sbjct: 181 TTEYDYDTLAHRLRELAFLNKGIRITL--EDRRGEKRR-NEYYYEGGISSYVKHLNRTKE 237
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
LH+ + + DGI +++ALQ+ +D Y+ + +AN+I T +GGTH G K +LTR +
Sbjct: 238 TLHEEPIYIEGEKDGIQVEIALQY-NDGYTSNIYSFANNIHTHEGGTHELGFKTALTRII 296
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N G+K+ K++D +L+GE VREGLT IISV+ P P+FEGQTKT+LGN + R +
Sbjct: 297 NDYGRKNNMFKEQDANLTGEDVREGLTAIISVKHPAPQFEGQTKTKLGNSDARTATESIF 356
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E ++L +P V I+ K + A +A LAAKRAR+L R+K+ L SSLPGKLADCSS
Sbjct: 357 AEQFEKFLLENPSVAKKIVEKGILASRARLAAKRARELTRRKNALEVSSLPGKLADCSSR 416
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P E+++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N E++ +I A
Sbjct: 417 DPAICELYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKSRLDKILSNNEVRAIITA 476
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PP
Sbjct: 477 LGTGI-GEDFDITKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMREVIEQGYVYIAQPP 535
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LYK+++GK+++Y Y D +L+++ + P IQR+KGLGEM P QLWETT+NPE R L
Sbjct: 536 LYKIQQGKRIEYAYSDRQLEEILTRLPEQPKPVIQRYKGLGEMNPEQLWETTMNPETRTL 595
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ ++DA EA+ F LMG +V+ R++ I +NA + NLD
Sbjct: 596 LKVSLQDAMEADETFEILMGDKVEPRRQFIEENAKYVKNLD 636
>gi|438000917|ref|YP_007270660.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|432177711|emb|CCP24684.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
Length = 640
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 321/641 (50%), Positives = 438/641 (68%), Gaps = 25/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +I+VLEG+E VR RP MYIGST RGLHHLVYE++DN++DEA AGY NI+V +
Sbjct: 12 YDENKIEVLEGIEHVRLRPGMYIGSTDSRGLHHLVYEVVDNSIDEAMAGYCKNIKVTINK 71
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+ + P KSALE LT+LHAGGKF +S GY VSGGLHGVG+SVV
Sbjct: 72 DNSVTVEDDGRGIPVKIQPKVGKSALEVALTMLHAGGKF--NSGGYKVSGGLHGVGVSVV 129
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +EV V RDG ++QKY RGKPVT V+ + GT+I F PD ++F
Sbjct: 130 NALSSWMEVEVKRDGGIFYQKYERGKPVT----DVIRKGDTEETGTKITFMPDNEIFEDT 185
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F + + R+RE AFLN + I L D N + + GG+ +V++LN +
Sbjct: 186 V-FSQDILTQRLREQAFLNRGIRIEL----FDERTGNSNVFHYEGGIVSFVKYLNRKRDV 240
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + D + +++A+Q+ +D+Y +T+L +AN+I T +GGTH+ G + +LTR++N
Sbjct: 241 LHEKPIYMSAARDDMEVEVAMQY-NDSYLETVLTFANNINTHEGGTHLSGFRTALTRSMN 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K +K++D +LSGE VREGLT +ISV++ NP+FEGQTKT+LGN E+R +VD V
Sbjct: 300 DYMRKMNLLKEQDANLSGEDVREGLTAVISVKLTNPQFEGQTKTKLGNSEIRSLVDTVVG 359
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E ++ +LE +P + I+ K+L A +A AA++AR+L R+K+ L ++LPGKLADC
Sbjct: 360 EGISRFLEENPAIARVIVEKALGAARAREAARKARELTRRKTALEHTTLPGKLADCRERD 419
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P E+++VEGDSAGGSAKQGRD + QAILPLRGKILNVE+ + NEEI+++I AL
Sbjct: 420 PRLCELYLVEGDSAGGSAKQGRDPQIQAILPLRGKILNVEKARMDKILNNEEIRSMITAL 479
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F E LRYHKII++ DADVDGAHIRTLLLTFFYRY + L + G IY+ PPL
Sbjct: 480 GTGI-GEEFDIEKLRYHKIILMADADVDGAHIRTLLLTFFYRYMQPLIEAGKIYIAQPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
Y+V GK+ Y +DD EL K+ S S I+RFKGLGEM QLWETT+NPE R +
Sbjct: 539 YRVVLGKKDYYAFDDLELSKILESLGNSRERAEIKRFKGLGEMAAEQLWETTMNPETRTI 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ +EDA A+ +F+ LMG +V+ R++ I ++AA + NLD
Sbjct: 599 LKVSLEDAVAADEIFTILMGDKVEPRRQFIFEHAAEVQNLD 639
>gi|433638427|ref|YP_007284187.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
gi|433290231|gb|AGB16054.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
Length = 643
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/637 (50%), Positives = 437/637 (68%), Gaps = 18/637 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 5 REYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCEDITVTI 64
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 65 HEDGSVSVVDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEVTV RDG Y + RG+P + V D+ + GT IRFWPD Q+F
Sbjct: 123 VVNALSERLEVTVTRDGGIYEHGFDRGEPDGEME-QVGEPDASNETGTSIRFWPDDQIFE 181
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T ++F + T++ R+RELAFLN + I LR E + D E E F + GG+ E+V+++N
Sbjct: 182 T-LEFSYATLSNRLRELAFLNSGVAITLRDEREVDDEGVIVQETFEYDGGIREFVEYINE 240
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ PLH DVV F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LT
Sbjct: 241 TRSPLHRDVVYFTDEDQSIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N ++ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 300 RVVNDYANENDLLSDLDENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVE 359
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
++ + L Y E +PD +I+ K++ A KA AAK+A +L R+KS L S++LPGKLADC
Sbjct: 360 GAMHDGLATYFEENPDTAQAIVLKAVEAAKARKAAKQAEELTRRKSALDSTALPGKLADC 419
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ P+E+E+FI EGDSAGGSAKQ R+ +QAILP++GKILNVE+ + +N+EI+NL
Sbjct: 420 QTRDPDEAELFIAEGDSAGGSAKQARNPDYQAILPIKGKILNVEKHRLDRILENDEIRNL 479
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ G++F + +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 480 ITAIGAGI-GDEFDLDEVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLIEHGYVYAT 538
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + DAE ++ + +QRFKGLGEM P QLW+TT+NPE
Sbjct: 539 QPPLYRIRYRGETYDAMTDAERDEIVAEKCDGNPSQVQRFKGLGEMNPEQLWDTTMNPEN 598
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 599 RILKQVSIEDAAAADRMFSVLMGDAVEPRKQFIKENA 635
>gi|163938018|ref|YP_001642902.1| DNA gyrase subunit B [Bacillus weihenstephanensis KBAB4]
gi|229136319|ref|ZP_04265066.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196]
gi|163860215|gb|ABY41274.1| DNA gyrase, B subunit [Bacillus weihenstephanensis KBAB4]
gi|228647191|gb|EEL03279.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196]
Length = 640
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/642 (51%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 129 NALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|377832540|ref|ZP_09815498.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
gi|377553732|gb|EHT15453.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
Length = 650
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 325/651 (49%), Positives = 427/651 (65%), Gaps = 19/651 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
EA K+ ++ Y + QIQVL+GLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG
Sbjct: 7 EAEKKAELASEYDASQIQVLKGLEAVRKRPGMYIGSTSAQGLHHLVWEIVDNGIDEALAG 66
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ I V + DNSI P+D+ T K ALETV TVLHAGGKFG S GY VS
Sbjct: 67 FCDEINVVVEPDNSITVTDNGRGIPVDIQKETGKPALETVFTVLHAGGKFG--SGGYKVS 124
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVG SVVNALS L+V V R G EY+ + G T + V S+ + GTR+
Sbjct: 125 GGLHGVGASVVNALSTELDVYVTRQGKEYYMDFDHGHVKTPMKV-VKEGVSELKHGTRVH 183
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F ++ T+ RIREL+FLN L I + ED EK E+ + GG+
Sbjct: 184 FKPDPEIFRETTVYNIKTLTDRIRELSFLNKGLKITI--EDKREEKPTRQEFHYEGGIRH 241
Query: 297 YVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
YV++LN ++ L D + + D GIT++++LQ+ + Y T++ + N+I T +GGTH
Sbjct: 242 YVEFLNEGQEVLFDPPIYVEGEDKGITVEVSLQYTT-GYRSTLMTFTNNIHTYEGGTHET 300
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K +LTR +N G+KS +K + +LSG+ VREGLT ++S++ P+P+FEGQTKT+LGN
Sbjct: 301 GFKTALTRVINDYGRKSGQLKG-NTTLSGDDVREGLTAVVSIKHPDPQFEGQTKTKLGNS 359
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
+ R D E +L +PD I+ K + A KA +AAKRAR++ R+KS L S L
Sbjct: 360 DARTATDHIFSEMFARFLMENPDTAHKIVEKGMLASKARVAAKRAREVTRKKSGLEISRL 419
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLAD +S PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ +
Sbjct: 420 PGKLADNTSKDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKAGMDRILA 479
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+EI++L ALG G G DF YHK+II+TDADVDGAHIRTLLLT FYRY K +
Sbjct: 480 NDEIRSLFTALGTGFGG-DFDITKANYHKLIIMTDADVDGAHIRTLLLTLFYRYMKPMIT 538
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G +Y+ PPLY+V +GK V+Y D EL+ V ++ + IQR+KGLGEM QLWE
Sbjct: 539 NGYVYIAQPPLYQVRQGKFVKYVESDEELQNVLNTLQPSPKPVIQRYKGLGEMDAEQLWE 598
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R L ++ ++DAAEA +F LMG +V R+E I+ A V NLD
Sbjct: 599 TTMDPEKRHLLRVDLDDAAEAEKIFPMLMGTKVGPRREFIEENAKFVENLD 649
>gi|423369455|ref|ZP_17346886.1| DNA gyrase subunit B [Bacillus cereus VD142]
gi|401077892|gb|EJP86219.1| DNA gyrase subunit B [Bacillus cereus VD142]
Length = 642
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQIQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG P L + DR G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++FT +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|423451258|ref|ZP_17428111.1| DNA gyrase subunit B [Bacillus cereus BAG5X1-1]
gi|423471658|ref|ZP_17448402.1| DNA gyrase subunit B [Bacillus cereus BAG6O-2]
gi|423520670|ref|ZP_17497143.1| DNA gyrase subunit B [Bacillus cereus HuA4-10]
gi|401146266|gb|EJQ53782.1| DNA gyrase subunit B [Bacillus cereus BAG5X1-1]
gi|401179767|gb|EJQ86930.1| DNA gyrase subunit B [Bacillus cereus HuA4-10]
gi|402431469|gb|EJV63537.1| DNA gyrase subunit B [Bacillus cereus BAG6O-2]
Length = 642
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG P L + DR G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPAADLKV----IGETDRTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++FT +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDAEIFTETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|218895146|ref|YP_002443557.1| DNA gyrase subunit B [Bacillus cereus G9842]
gi|228905437|ref|ZP_04069392.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222]
gi|228968646|ref|ZP_04129629.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402562898|ref|YP_006605622.1| DNA gyrase subunit B [Bacillus thuringiensis HD-771]
gi|434378653|ref|YP_006613297.1| DNA gyrase subunit B [Bacillus thuringiensis HD-789]
gi|218542098|gb|ACK94492.1| DNA gyrase, B subunit [Bacillus cereus G9842]
gi|228791075|gb|EEM38693.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228854257|gb|EEM98960.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222]
gi|401791550|gb|AFQ17589.1| DNA gyrase subunit B [Bacillus thuringiensis HD-771]
gi|401877210|gb|AFQ29377.1| DNA gyrase subunit B [Bacillus thuringiensis HD-789]
Length = 640
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/642 (51%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 129 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|299147112|ref|ZP_07040179.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
gi|298514997|gb|EFI38879.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
Length = 652
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/653 (48%), Positives = 436/653 (66%), Gaps = 28/653 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VIINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDNT 181
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQW 300
+FT + +D+ +A R+RELA+LN L I+L E + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKGEQFYSEEGLREFVRF 240
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVQEPQFEGQTKTKLGNNEVMG 359
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS + E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ +++EI
Sbjct: 420 ADCSDKDATKCELFLVEGDSAGGTAKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEI 479
Query: 540 QNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + ++ KEA LRYHKIII+TDADVDG+HI TL++TFF+RY +
Sbjct: 480 RNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQ 539
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM Q
Sbjct: 540 NGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 599 LWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 651
>gi|293376413|ref|ZP_06622647.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909]
gi|325839309|ref|ZP_08166775.1| DNA gyrase, B subunit [Turicibacter sp. HGF1]
gi|292644969|gb|EFF63045.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909]
gi|325490591|gb|EGC92906.1| DNA gyrase, B subunit [Turicibacter sp. HGF1]
Length = 639
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/643 (51%), Positives = 439/643 (68%), Gaps = 22/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY + I VA
Sbjct: 7 TQQYDASNIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEALAGYCTEINVA 66
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ +N I P+D+H T KS +ETV TVLHAGGKFGG S LHGVG
Sbjct: 67 ITENNEIIVKDNGRGIPVDVHKQTGKSTVETVYTVLHAGGKFGGGGYKVSGG--LHGVGA 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEVTV R+G +Y Q + +G P+ L HV + D GT ++F PD ++F
Sbjct: 125 SVVNALSEYLEVTVSRNGKKYFQSFEKGTPMNEL--HV--IGESDTTGTEVKFKPDPEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D++ + RIRELAFLN L I L ED EK Q +E+ F GG+ EYV +LN +
Sbjct: 181 TETTVYDYDILRNRIRELAFLNKGLKITL--EDLRSEKPQRHEFHFEGGISEYVSFLNKN 238
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ +H DV+ + DGI++++A+Q+ + + + +AN+I T +GGTH G +A+LTR
Sbjct: 239 KEVIHEDVIYVEGERDGISVEIAMQYNT-GVAGNIYSFANNINTHEGGTHEAGFRAALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+NS KK+ +K D +L GE +REGLT IIS + P+P+FEGQTKT+LGN EVR++ D
Sbjct: 298 IINSYAKKANLLKGDD-ALIGEDIREGLTAIISAKHPDPQFEGQTKTKLGNSEVRRIADN 356
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +L +P IL KSL A +A +AAKRAR++VR+KS L S KLADC
Sbjct: 357 VFSEGFERFLMENPQAAKLILDKSLMAARARMAAKRAREMVRRKSPLESLGFKSKLADCQ 416
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S SE+FIVEGDSAGGSAKQGRD +FQAILPLRGK+LNVE+ +Y N EI+++I
Sbjct: 417 SRDANISELFIVEGDSAGGSAKQGRDNKFQAILPLRGKVLNVEKARIDKVYANNEIKSMI 476
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G GV G++F E RYHK++I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+
Sbjct: 477 HAIGTGV-GDEFDIEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRPLIENGYVYIAQ 535
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+ +GK+++Y Y EL+ V + + ++QR+KGLGEM QLWETT++PE R
Sbjct: 536 PPLFKISQGKRIEYAYSQEELEAVMETLSATPRPNVQRYKGLGEMNAEQLWETTMDPEVR 595
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ +F LMG RV+ R+E I NA + NLD
Sbjct: 596 TLLQVTLDDAVEADEIFDMLMGDRVEPRREFIDANAKYVTNLD 638
>gi|332798030|ref|YP_004459529.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|332695765|gb|AEE90222.1| DNA gyrase, B subunit [Tepidanaerobacter acetatoxydans Re1]
Length = 635
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 321/641 (50%), Positives = 438/641 (68%), Gaps = 25/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +I+VLEG+E VR RP MYIGST RGLHHLVYE++DN++DEA AGY NI+V +
Sbjct: 7 YDENKIEVLEGIEHVRLRPGMYIGSTDSRGLHHLVYEVVDNSIDEAMAGYCKNIKVTINK 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+ + P KSALE LT+LHAGGKF +S GY VSGGLHGVG+SVV
Sbjct: 67 DNSVTVEDDGRGIPVKIQPKVGKSALEVALTMLHAGGKF--NSGGYKVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +EV V RDG ++QKY RGKPVT V+ + GT+I F PD ++F
Sbjct: 125 NALSSWMEVEVKRDGGIFYQKYERGKPVT----DVIRKGDTEETGTKITFMPDNEIFEDT 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ F + + R+RE AFLN + I L D N + + GG+ +V++LN +
Sbjct: 181 V-FSQDILTQRLREQAFLNRGIRIEL----FDERTGNSNVFHYEGGIVSFVKYLNRKRDV 235
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + D + +++A+Q+ +D+Y +T+L +AN+I T +GGTH+ G + +LTR++N
Sbjct: 236 LHEKPIYMSAARDDMEVEVAMQY-NDSYLETVLTFANNINTHEGGTHLSGFRTALTRSMN 294
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K +K++D +LSGE VREGLT +ISV++ NP+FEGQTKT+LGN E+R +VD V
Sbjct: 295 DYMRKMNLLKEQDANLSGEDVREGLTAVISVKLTNPQFEGQTKTKLGNSEIRSLVDTVVG 354
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E ++ +LE +P + I+ K+L A +A AA++AR+L R+K+ L ++LPGKLADC
Sbjct: 355 EGISRFLEENPAIARVIVEKALGAARAREAARKARELTRRKTALEHTTLPGKLADCRERD 414
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P E+++VEGDSAGGSAKQGRD + QAILPLRGKILNVE+ + NEEI+++I AL
Sbjct: 415 PRLCELYLVEGDSAGGSAKQGRDPQIQAILPLRGKILNVEKARMDKILNNEEIRSMITAL 474
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F E LRYHKII++ DADVDGAHIRTLLLTFFYRY + L + G IY+ PPL
Sbjct: 475 GTGI-GEEFDIEKLRYHKIILMADADVDGAHIRTLLLTFFYRYMQPLIEAGKIYIAQPPL 533
Query: 607 YKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
Y+V GK+ Y +DD EL K+ S S I+RFKGLGEM QLWETT+NPE R +
Sbjct: 534 YRVVLGKKDYYAFDDLELSKILESLGNSRERAEIKRFKGLGEMAAEQLWETTMNPETRTI 593
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ +EDA A+ +F+ LMG +V+ R++ I ++AA + NLD
Sbjct: 594 LKVSLEDAVAADEIFTILMGDKVEPRRQFIFEHAAEVQNLD 634
>gi|228911333|ref|ZP_04075137.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200]
gi|423362664|ref|ZP_17340164.1| DNA gyrase subunit B [Bacillus cereus VD022]
gi|423565616|ref|ZP_17541891.1| DNA gyrase subunit B [Bacillus cereus MSX-A1]
gi|228848351|gb|EEM93201.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200]
gi|401076938|gb|EJP85283.1| DNA gyrase subunit B [Bacillus cereus VD022]
gi|401193298|gb|EJR00304.1| DNA gyrase subunit B [Bacillus cereus MSX-A1]
Length = 642
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|435848705|ref|YP_007310955.1| DNA gyrase subunit B [Natronococcus occultus SP4]
gi|433674973|gb|AGB39165.1| DNA gyrase subunit B [Natronococcus occultus SP4]
Length = 641
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/633 (49%), Positives = 428/633 (67%), Gaps = 16/633 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++ A
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGHCDEITVSIEA 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVVVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++ + GT IRFWPD +F
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEAGEPVGDME-RVRDMEPDEDTGTEIRFWPDSDIFE-G 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F +T++ R+RELAFLN + I LR E + E Y + GG+ E+V++LN +
Sbjct: 183 DEFSFSTLSSRLRELAFLNSGVRITLRDERQETEDAVAETYEYEGGIREFVEYLNETRAV 242
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+HD V+ F + I +++A+Q D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 243 MHDDVIYFEDEEQDIQVEVAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRVVN 301
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++
Sbjct: 302 DYGNDQGLLGDIDGNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMH 361
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L Y E HPD ++I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 ERLGTYFEEHPDTAEAIVVKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKD 421
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEE+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+
Sbjct: 422 PEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAI 481
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F + +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPL
Sbjct: 482 GAGI-GDEFNIDDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPL 540
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V + DAE ++ +QRFKGLGEM P QLWETT+NP+ R+LK
Sbjct: 541 YRVRYRGETYDAMTDAERNEIVEEVCDGNPTQVQRFKGLGEMNPEQLWETTMNPDNRILK 600
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
++ +EDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 RITVEDAAAADKMFSVLMGDAVEPRKQFIKDNA 633
>gi|222150258|ref|YP_002559411.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
gi|222119380|dbj|BAH16715.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
Length = 642
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 317/639 (49%), Positives = 434/639 (67%), Gaps = 19/639 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA ++EV +
Sbjct: 12 YGADQIQVLEGLEAVRKRPGMYIGSTASKGLHHLVWEIVDNSIDEALAGYADHVEVTIEE 71
Query: 137 DN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IP+D+ + A+E +LTVLHAGGKFGG S LHGVG SVV
Sbjct: 72 DNWIKVTDNGRGIPVDIQKKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVV 129
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +LEV V +DG YHQ Y RG P L + D+ GT IRF D ++FT
Sbjct: 130 NALSSTLEVYVHKDGKIYHQAYHRGVPAFDLKV----IGETDKTGTVIRFKADSEIFTET 185
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++++ + RIRELAFLN + + + K++ + ++ +++ Y + GG++ YV+ LN K+
Sbjct: 186 TEYEYEILQKRIRELAFLNKGIKLEI-KDEREQDEIRHDVYHYEGGIKSYVELLNKSKET 244
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + + + D I +++++Q+ ++ YS +L YAN+I T +GGTH +G K +LTR +N
Sbjct: 245 LFPEPIYIHDNRDEIEVEISIQY-NNGYSTNLLSYANNIHTYEGGTHEDGFKRALTRVIN 303
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
S G K+K +K+ D LSGE VREG+T I+S++ NP+FEGQTKT+LGN EVR++ D
Sbjct: 304 SYGVKNKLIKEADEKLSGEDVREGITAIVSIKHGNPQFEGQTKTKLGNTEVRQITDNLFA 363
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E +L +P + I+ K + A +A LAAK+AR++ R+KS L SSLPGKLADCSS
Sbjct: 364 ENFERFLLENPPIARIIVEKGIMASRARLAAKKAREVTRRKSGLEISSLPGKLADCSSKD 423
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SE++IVEGDSAGGSAK GRD + QAILPLRGKILNVE+ + N EI+++I A+
Sbjct: 424 PSISELYIVEGDSAGGSAKSGRDSKTQAILPLRGKILNVEKARLDRILGNNEIRSMITAM 483
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE F RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL
Sbjct: 484 GTGIGGE-FDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPL 542
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+KVE+GK+ Y Y++ EL K++ P+ + + R+KGLGEM QLWETT+NPE R +
Sbjct: 543 FKVEQGKKKYYVYNERELDKLRKELPTTPKWQLARYKGLGEMNADQLWETTMNPEHRSML 602
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
Q+ + DA EA+ VF LMG V+ R+ I+ A N+D
Sbjct: 603 QVTLSDAIEADEVFEMLMGDVVEHRRTFIEENAEYANVD 641
>gi|333922243|ref|YP_004495823.1| DNA gyrase subunit B [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747804|gb|AEF92911.1| DNA gyrase, B subunit [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 636
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/643 (51%), Positives = 441/643 (68%), Gaps = 29/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+ + I V +
Sbjct: 8 YSADQIQVLEGLEAVRRRPGMYIGSTSSRGLHHLVYEVVDNSIDEALAGFCNRISVVIHK 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+DLHP K A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 68 DNSVTVEDNGRGIPVDLHPKVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV + R+G YHQ YSRG PV+ L + GT++ F PD ++F
Sbjct: 126 NALSEKLEVEIKRNGNIYHQAYSRGVPVSELKI----IGKSKSTGTKVTFKPDPEIFEET 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F T+A R+RELA+LN + I ++ E DP Q + F GG+ ++V+ LN +K+
Sbjct: 182 T-FSLETLAQRLRELAYLNKGVKITIKDERKDPPVEQ--TFQFDGGIRDFVKHLNRNKQV 238
Query: 308 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
LH V G ++ I +++ALQ+ +D Y++ +L +AN+I T+DGGTH G K +LTR
Sbjct: 239 LHSKPIYVTGEKEQ---IIVEIALQY-NDTYNENILSFANNIHTVDGGTHEIGFKTALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+ +K+ D +LSGE +REG T +ISV+V P+FEGQTKT+LGN EVR +VD
Sbjct: 295 VVNDYGRNHNLLKNNDPNLSGEDIREGATVVISVKVREPQFEGQTKTKLGNSEVRGIVDS 354
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ L YLE +P V I+ K+++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 355 IFADGLATYLEENPTVGKRIIEKAITAARAREAARKARELTRRKSALDTMSLPGKLADCS 414
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 415 EKDPSVSELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKILANEEIRAMI 474
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G+DF RYHKIII+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 475 TALGCGI-GQDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFYRHMRPLIEAGYVYIAQ 533
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL++V +GK Y Y D EL+++ + + +IQR+KGLGEM P QLWETT++P+ R
Sbjct: 534 PPLFRVRKGKLDSYVYSDHELEELLKRVGYDNV-NIQRYKGLGEMNPEQLWETTMDPDTR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 593 TVLQVTLEDAIEADATFSMLMGDRVEPRRDFIQENAQYVRNLD 635
>gi|393782285|ref|ZP_10370470.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
gi|392673556|gb|EIY67015.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
Length = 655
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/649 (48%), Positives = 434/649 (66%), Gaps = 28/649 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IEV +
Sbjct: 15 SYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTIN 74
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE +TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 75 EDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSC 132
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y GKP+ V V + GTR +FWPD +FT
Sbjct: 133 VNALSTHMVTQVYRNGKVYQQEYEIGKPLYP----VKEVGVSEHTGTRQQFWPDNTIFTE 188
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 304
+ + + +AGR+RELA+LN + I L + ++ Q+ + F GL+E+V++L +
Sbjct: 189 TV-YKYEILAGRMRELAYLNAGIKITLTDRRTVNDEGQFKQEVFYSEEGLKEFVRYLESS 247
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ L +DV+ + GI I++A+ + + +S+++ Y N+I TI+GGTH+ G + +LTR
Sbjct: 248 RDHLINDVIYLNTEKQGIPIEVAIMYNT-GFSESIHSYVNNINTIEGGTHLAGFRRALTR 306
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + SK ++ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ
Sbjct: 307 TLKKYAEDSKMLEKVKVEIAGDDFREGLTGVISVKVAEPQFEGQTKTKLGNNEVMGAVDQ 366
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HP I+ K + A A AA++AR++V++KS + LPGKLADCS
Sbjct: 367 AVGEALSYYLEEHPKEAKQIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCS 426
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ ++EEI+N+
Sbjct: 427 DKDATKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIY 486
Query: 544 RALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ K A LRYHKIII+TDADVDG+HI TL++TFF+RY + G +
Sbjct: 487 TALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYL 546
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWET 656
Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGEM QLWET
Sbjct: 547 YIATPPLYLCKKGKIEEYCWTDAQRQKFIDTYGGGSENAVHT-QRYKGLGEMNAQQLWET 605
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE RMLKQ+ IE+AAEA+ +FS LMG V R+E I++ A N+D
Sbjct: 606 TMDPENRMLKQVNIENAAEADYIFSMLMGEDVGPRREFIEDNATYANID 654
>gi|329954160|ref|ZP_08295255.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
gi|328528137|gb|EGF55117.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
Length = 653
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 311/650 (47%), Positives = 437/650 (67%), Gaps = 29/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYECGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 304
+ ++++ +A R+RELA+LN + I L E Y + F GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKITLTDLRVKEEDGSYKQEIFYSVEGLKEFVRYIDSS 244
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K ++ + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALSYYLEEHPKESKMIVDKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
+ALG+ GV ED K+ + LRY K+II+TDADVDG+HI TL++T F+RY + +G
Sbjct: 484 QALGIRFGVDSEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGY 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWE
Sbjct: 544 LYIATPPLYLCTKGKVKEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWE 602
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE RMLKQ+ +E+AAEA+ FS LMG V R++ I+ A N+D
Sbjct: 603 TTMNPENRMLKQVHLENAAEADYTFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|313900991|ref|ZP_07834481.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|346314835|ref|ZP_08856352.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|373123464|ref|ZP_09537310.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
gi|312954411|gb|EFR36089.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|345905773|gb|EGX75510.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|371660797|gb|EHO26041.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
Length = 647
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 317/647 (48%), Positives = 451/647 (69%), Gaps = 24/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E+ V +Y ++ IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+A++
Sbjct: 13 EDKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGFATD 72
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IE+ + +N I P + T S +ET+ TVLHAGGKFGG + Y VSGGLH
Sbjct: 73 IEITIEKNNIIRVEDNGRGMPTGIVEKTGISGVETIFTVLHAGGKFGGGA--YKVSGGLH 130
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V ++G E+ ++ G T + ++ ++ G+ +RF D
Sbjct: 131 GVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKATG---PLKIINDSEKHGSIVRFKAD 187
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQ 299
++F ++D +T+ RIR+LAFLN + + L E +++P++ EY + GG+ +YV+
Sbjct: 188 PEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCDEREAEPKRI---EYKYDGGIRQYVE 244
Query: 300 WLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
+LN +K PLH+ V + + + DGI ++A+Q+ +D Y ++ + N+I T++GGTH +G +
Sbjct: 245 YLNKNKTPLHEEVVYVEGIEDGILAEIAMQY-NDGYIPSIYSFCNNINTMEGGTHEDGFR 303
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR +N+ ++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 304 LALTRIINAYAREQGMIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVR 362
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
K+V + E L + +P+ I+ K++ A KA LAAK+AR+L R+KS L +SLPGK
Sbjct: 363 KIVSSILGEQLDRFFMENPETAKIIVDKAILASKARLAAKKARELTRRKSALEITSLPGK 422
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS E EI+IVEGDSAGGSAKQGR+ +FQAILPLRGKILNVE+ +++N E
Sbjct: 423 LADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAILPLRGKILNVEKARLQRIFENNE 482
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+++I A G G+ GE+ LRYHKIII+TDADVDGAHI TL+LTFFYRY + + + G
Sbjct: 483 IRSMITAFGCGI-GEEMDVSKLRYHKIIIMTDADVDGAHICTLMLTFFYRYLRPIIEGGY 541
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y+ +PPL+KV +G +V+Y Y + E++ V++S N ++QR+KGLGEM P QLWETT+
Sbjct: 542 VYIAMPPLFKVAKGNRVEYVYKEEEVETVRASMGENV--NVQRYKGLGEMNPEQLWETTM 599
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+P R LKQ+ I+DA EA+ +F LMG V+ R++ IQ A LD
Sbjct: 600 DPAFRTLKQVNIDDAMEADSIFEMLMGEEVEPRRDFIQENAIYATLD 646
>gi|403068971|ref|ZP_10910303.1| DNA gyrase subunit B [Oceanobacillus sp. Ndiop]
Length = 641
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/642 (49%), Positives = 434/642 (67%), Gaps = 21/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +I+V
Sbjct: 10 NQAYDADQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYCDHIQVI 69
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + ALE ++TVLHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVKDNGRGIPVDIQKKTGRPALEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +LEV V R+ Y +++G P+ + V D GT F PD ++F
Sbjct: 128 SVVNALSSNLEVYVHRNEKVYFLGFAKGVPLGEIEV----VGETDITGTVTHFTPDPEIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T ++ T+ R+RELAFLN LTI + + +D E Y ++ GG+ YV+++N +
Sbjct: 184 TETTDYNFETLEQRLRELAFLNKGLTITIEDKRTDREPVTY---YYEGGVSSYVEYINKN 240
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K+ LH+ + GI +++A+Q+ +D +S + +AN+I T +GG H G ++ LTR
Sbjct: 241 KEVLHEPFYAEGEDKGIAVEVAIQY-NDGFSSNLFSFANNIHTYEGGAHEVGFRSGLTRV 299
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ +K+ + +LSG+ VREG+T I+SV+ P+P+FEGQTKT+LGN EVR + D
Sbjct: 300 INDYARKNNLIKENETNLSGDDVREGMTAIVSVKHPDPQFEGQTKTKLGNSEVRTITDSV 359
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +++L +P I+ K L A +A LAAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 FSELFSKFLYENPTTARIIVDKGLMASRARLAAKKARELTRRKSALEISSLPGKLADCSS 419
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SE++IVEG+SAGGSAK GRDR FQAILPLRGKILNVE+ + N EI+++I
Sbjct: 420 KDATISELYIVEGNSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRSMIT 479
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G+DF RYHKI+I+TDADVDGAHIRTLLLTFF+RY + L D G IY+ P
Sbjct: 480 ALGTGV-GDDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFFRYMRPLIDNGYIYIAQP 538
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL++V++GK VQY YDD EL +V + P+ +IQR+KGLGEM QLWETT++PE+R
Sbjct: 539 PLFQVKQGKSVQYVYDDKELTRVLAEVPATPKPAIQRYKGLGEMDAEQLWETTMDPEKRT 598
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ + DA EA+ VF LMG +V+ R+ I +NA + NLD
Sbjct: 599 LLQVELSDAIEADQVFDMLMGDKVEPRRNYIEENAKYVQNLD 640
>gi|167764147|ref|ZP_02436274.1| hypothetical protein BACSTE_02530 [Bacteroides stercoris ATCC
43183]
gi|167698263|gb|EDS14842.1| DNA gyrase, B subunit [Bacteroides stercoris ATCC 43183]
Length = 653
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/650 (47%), Positives = 437/650 (67%), Gaps = 29/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y G P+ + V V + GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYECGHPLYS----VKEVGTTAITGTRQQFWPDATIFTE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTD 304
+ + ++ +A R+RELA+LN + I L E Y + ++ GL+E+V+++++
Sbjct: 186 TV-YSYDILATRMRELAYLNAGIKITLTDLRVKEEDGSYKQEVFYSVEGLKEFVRYIDSS 244
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K ++ + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALSYYLEEHPKEAKMIVDKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRTFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
+ALG+ GV GED K+ + LRY K+II+TDADVDG+HI TL++T F+RY + +G
Sbjct: 484 QALGIRFGVDGEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGY 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWE
Sbjct: 544 LYIATPPLYLCTKGKVKEYCWTDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWE 602
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE RMLKQ+ +E+AAEA+ FS LMG V R++ I+ A N+D
Sbjct: 603 TTMNPENRMLKQVHLENAAEADYTFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|422325721|ref|ZP_16406749.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
gi|371667469|gb|EHO32594.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
Length = 647
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 317/647 (48%), Positives = 451/647 (69%), Gaps = 24/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E+ V +Y ++ IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+A++
Sbjct: 13 EDKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGFATD 72
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IE+ + +N I P + T S +ET+ TVLHAGGKFGG + Y VSGGLH
Sbjct: 73 IEITIEKNNIIRVEDNGRGMPTGIVEKTGISGVETIFTVLHAGGKFGGGA--YKVSGGLH 130
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE LEV V ++G E+ ++ G T + ++ ++ G+ +RF D
Sbjct: 131 GVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKATG---PLKIINDSEKHGSIVRFKAD 187
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQ 299
++F ++D +T+ RIR+LAFLN + + L E +++P++ EY + GG+ +YV+
Sbjct: 188 PEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCDEREAEPKRI---EYKYDGGIRQYVE 244
Query: 300 WLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
+LN +K PLH+ V + + + DGI ++A+Q+ +D Y ++ + N+I T++GGTH +G +
Sbjct: 245 YLNKNKTPLHEEVVYVEGIEDGILAEIAMQY-NDGYIPSIYSFCNNINTMEGGTHEDGFR 303
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR +N+ ++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 304 LALTRIINAYAREQGMIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVR 362
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
K+V + E L + +P+ I+ K++ A KA LAAK+AR+L R+KS L +SLPGK
Sbjct: 363 KIVSSILGEQLDRFFMENPETAKIIVDKAILASKARLAAKKARELTRRKSALEITSLPGK 422
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS E EI+IVEGDSAGGSAKQGR+ +FQAILPLRGKILNVE+ +++N E
Sbjct: 423 LADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAILPLRGKILNVEKARLQRIFENNE 482
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+++I A G G+ GE+ LRYHKIII+TDADVDGAHI TL+LTFFYRY + + + G
Sbjct: 483 IRSMITAFGCGI-GEEMDVSKLRYHKIIIMTDADVDGAHICTLMLTFFYRYLRPIIEGGY 541
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y+ +PPL+KV +G +V+Y Y + E++ V++S N ++QR+KGLGEM P QLWETT+
Sbjct: 542 VYIAMPPLFKVAKGNRVEYVYKEEEVETVRASMGDNV--NVQRYKGLGEMNPEQLWETTM 599
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+P R LKQ+ I+DA EA+ +F LMG V+ R++ IQ A LD
Sbjct: 600 DPAFRTLKQVNIDDAMEADSIFEMLMGEEVEPRRDFIQENAIYATLD 646
>gi|423556993|ref|ZP_17533296.1| DNA gyrase subunit B [Bacillus cereus MC67]
gi|401193768|gb|EJR00770.1| DNA gyrase subunit B [Bacillus cereus MC67]
Length = 642
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG P L + DR G
Sbjct: 118 VSGG--LHGVGASVVNALSIELEVFVHRDGKIHYQKYERGIPAADLKV----IGETDRTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++FT +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDAEIFTETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|325856512|ref|ZP_08172201.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|327313062|ref|YP_004328499.1| DNA gyrase subunit B [Prevotella denticola F0289]
gi|325483481|gb|EGC86454.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|326945170|gb|AEA21055.1| DNA gyrase, B subunit [Prevotella denticola F0289]
Length = 657
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/655 (48%), Positives = 438/655 (66%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTIN 69
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSVTVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS ++ V+RDG Y Q+Y +GKP+ + V ++ GTR +FWPD +FTT
Sbjct: 128 VNALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETEKTGTRQQFWPDAGIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 304
+ F + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-FQWDIVARRMRELAYLNAGIRITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTR
Sbjct: 243 RQHLFDDVIYLKTEKQGIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTR 301
Query: 364 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
TL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKAYADSDPQISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG 361
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESV 481
Query: 540 QNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV+ E DF+ + LRY KIII+TDADVDG+HI TL++T FYRY +
Sbjct: 482 MNIIQSIGVRFGVEDEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVI 541
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
++G +Y+ PPLYK K +YCY D + L K + QR+KGLGEM P
Sbjct: 542 EQGHLYIATPPLYKCTYKKVSEYCYTDQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|145577989|gb|ABP82713.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
gi|145578003|gb|ABP82720.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar vazensis]
gi|145578011|gb|ABP82724.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/642 (51%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|229065153|ref|ZP_04200446.1| DNA gyrase subunit B [Bacillus cereus AH603]
gi|228716182|gb|EEL67901.1| DNA gyrase subunit B [Bacillus cereus AH603]
Length = 640
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 324/640 (50%), Positives = 435/640 (67%), Gaps = 22/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 129 NALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTET 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+++ +T+A R+RELAFLN + + + + E Q E+ + GG++ YV+ LN K+P
Sbjct: 185 TEYEFDTLATRMRELAFLNRNIKLII---EDKREHKQKKEFHYEGGIKSYVEHLNRSKQP 241
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N
Sbjct: 242 IHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 301 DYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFS 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 361 EAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKD 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+
Sbjct: 421 PAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAI 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL
Sbjct: 481 GTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R L
Sbjct: 540 FKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLL 599
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 600 QVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|218131840|ref|ZP_03460644.1| hypothetical protein BACEGG_03461 [Bacteroides eggerthii DSM 20697]
gi|317474545|ref|ZP_07933819.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
gi|217986143|gb|EEC52482.1| DNA gyrase, B subunit [Bacteroides eggerthii DSM 20697]
gi|316909226|gb|EFV30906.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
Length = 653
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 311/650 (47%), Positives = 437/650 (67%), Gaps = 29/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y G P+ + V V + GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYECGHPLYS----VKEVGVTEITGTRQQFWPDDTIFTE 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 304
+ ++++ +A R+RELA+LN + I L E Y + F GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKITLTDLRVKEEDGNYKQEIFYSVEGLKEFVRYIDSS 244
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K ++ + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALSYYLEEHPKESKMIVDKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRTFQAILPLRGKILNVEKAMWHKAFESDEVNNII 483
Query: 544 RALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
+ALG+ GV GED K+ + LRY K+II+TDADVDG+HI TL++T F+RY + +G
Sbjct: 484 QALGIRFGVDGEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGY 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWE
Sbjct: 544 LYIATPPLYLCTKGKVKEYCWTDQQRQKFIDTYGGGSENAIHT-QRYKGLGEMNPEQLWE 602
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE RMLKQ+ +E+AAEA+ FS LMG V R++ I+ A N+D
Sbjct: 603 TTMNPENRMLKQVHLENAAEADYTFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|385798923|ref|YP_005835327.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309388287|gb|ADO76167.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 640
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/642 (50%), Positives = 438/642 (68%), Gaps = 22/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y +E IQVLEGLEAVRKRP MYIGST GLHHLVYE++DN++DEA AGY S + V +
Sbjct: 8 NYEAEHIQVLEGLEAVRKRPGMYIGSTSLEGLHHLVYEVVDNSIDEAMAGYCSEVIVEIK 67
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
N IP+++HP +K A+E V+T LHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 68 PGNIIKVQDDGRGIPVEIHPKVDKPAVEVVMTTLHAGGKFGGE--GYKVSGGLHGVGISV 125
Query: 187 VNALSESLEVTV-WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VNAL+E +EV + W+DG Y QKY RG P L ++ + GT I F PD +F
Sbjct: 126 VNALTEWMEVEIAWKDGKVYKQKYERGIPQHEL--QLIGNCDGNCTGTTIEFKPDPLIFE 183
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I FD +A R++ELAFLN + I + D+ E+ Q ++ F GGL +V++L+ K
Sbjct: 184 -EIDFDFKLLAKRLKELAFLNKGINIKIV--DNRKEEVQQEDFHFDGGLISFVEYLSQSK 240
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
KPL + + + + +I++A+ + Y+ ++ +AN+I T +GGTH+ G K++ TRT
Sbjct: 241 KPLLSEPIYIEDEAEEGSIEVAIMY-HQGYNTSLYTFANNINTKEGGTHLSGFKSATTRT 299
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N + +KD D +L G+ +REG+ IISV++ P+FEGQTKT+LGN E+R VD +
Sbjct: 300 FNDYARNKNLLKDGDDNLKGQDIREGMIAIISVKLSEPQFEGQTKTKLGNSEMRGFVDSA 359
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V +L YLE +P V +I+ K++SA A AA++ARDL R+KS L S++LPGKLADCS
Sbjct: 360 VSSFLKTYLEENPKVGKAIIEKAISAAHARKAARKARDLTRRKSALTSTALPGKLADCSK 419
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+++E++IVEGDSAGGSAKQGR+R FQAILPL+GKILNVE+ + N+EI+ LI
Sbjct: 420 RKADDTEVYIVEGDSAGGSAKQGRNREFQAILPLKGKILNVEKSRLNKILNNDEIRALIT 479
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G GV GE+F +RY +III+TDADVDGAHIRTLLLTFFYRY + L + G IY+ P
Sbjct: 480 AIGTGV-GEEFDLTNIRYDRIIIMTDADVDGAHIRTLLLTFFYRYMRPLLENGNIYIAQP 538
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYKV++G++ +Y Y+D LK++ + + S+QR+KGLGEM P QLW+TT++PE R+
Sbjct: 539 PLYKVKKGRREEYVYNDKALKELIEEIGKDRV-SMQRYKGLGEMNPSQLWDTTMDPENRI 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ IEDA A+ FS LMG +V R+E IQ A V NLD
Sbjct: 598 LLQVDIEDAIRADETFSILMGDKVAPRREFIQKHAREVKNLD 639
>gi|255527581|ref|ZP_05394445.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|296186779|ref|ZP_06855180.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|255508714|gb|EET85090.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|296048493|gb|EFG87926.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
Length = 637
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 329/646 (50%), Positives = 450/646 (69%), Gaps = 31/646 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ NIEV +
Sbjct: 7 QVYDENQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGFCKNIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +HP K +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVTDDGRGMPVGMHPKMKKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+G + Q + RGK T L V + GT+I F PD ++F
Sbjct: 125 VVNALSELCEVEVKREGHIWKQAFERGKVKTGLEI----VGDSEGHGTKIHFKPDAEIFE 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +D++T+A R+RELAFLN + I L SD ++ + + GG++ +V +LN +K
Sbjct: 181 -EVDYDYDTLAQRLRELAFLNRNIRINL----SDERIDKLEVFHYEGGIKSFVSYLNRNK 235
Query: 306 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ ++ V G ++D ++++++Q+ +D Y++ + +AN+I T++GGTH+ G K++L
Sbjct: 236 QVINKEPIYVEGNKQDC---SVEISIQY-NDGYTENIFSFANNIDTVEGGTHLAGFKSAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR N KK +K+ D +LSGE +REGLT +ISV++ +P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRAFNDYAKKFGILKENDKNLSGEDIREGLTAVISVKLIDPQFEGQTKTKLGNSEVRGIV 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D V E ++ +L+ +P V SIL KSL A +A AA++AR+L R+KS+L ++SLPGKLAD
Sbjct: 352 DGIVGEGVSSFLQENPQVAKSILDKSLMASRAREAARKARELTRRKSILENTSLPGKLAD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS P+E EI++VEGDSAGGSAKQGR+RRFQAILPLRGKI+NVE++ + EEI+
Sbjct: 412 CSSKDPKECEIYLVEGDSAGGSAKQGRNRRFQAILPLRGKIMNVEKQRLDKILGYEEIRA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A G G+ G+DF E +RY +III+TDADVDGAHIRTLLLTFFYRY K L D+G +Y+
Sbjct: 472 MITAFGGGI-GKDFDVEKIRYDRIIIMTDADVDGAHIRTLLLTFFYRYMKELVDQGHVYI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV +GK+ Y Y D EL+K+ + +IQR+KGLGEM QLW+TT+NP
Sbjct: 531 AQPPLYKVAKGKKEHYAYSDKELEKLLEDVGGKDNNTNIQRYKGLGEMDATQLWDTTMNP 590
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++R+L Q+ +EDA A+ +F+ LMG +V+ R+E IQ NA ++NLD
Sbjct: 591 DERVLLQVTVEDAMAADEIFTILMGDKVEPRREFIQENAKKVINLD 636
>gi|75761791|ref|ZP_00741726.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74490724|gb|EAO54005.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 645
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 5 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 60
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 61 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 120
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + D+ G
Sbjct: 121 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTG 174
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 175 TITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 229
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 230 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 288
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 289 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 348
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 349 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSA 408
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 409 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 468
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 469 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 527
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 528 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 587
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 588 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 644
>gi|145578025|gb|ABP82731.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/642 (51%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPAADLKV----IGETDRTGTITRFKPDAEIFTET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|402837518|ref|ZP_10886039.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
gi|402274977|gb|EJU24144.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
Length = 640
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/652 (49%), Positives = 450/652 (69%), Gaps = 30/652 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 2 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 61
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V++ +N I P+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 62 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 119
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 235
HGVG+SVVNALS+SL V ++G Y Q++ G VT + TC + + GT I
Sbjct: 120 HGVGVSVVNALSKSLTAVVKKEGKIYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 173
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD+++F + + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 174 SFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 230
Query: 296 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 231 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 289
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 290 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 349
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 350 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 409
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + QAILPLRGKILNVE+
Sbjct: 410 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAILPLRGKILNVEKSRLDKAL 469
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+++ I+N+I A G G+ G ++ + LRYHKIII++DADVDGAHIRTL+LTFF+RY + L
Sbjct: 470 QSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSDADVDGAHIRTLILTFFFRYMRPLI 528
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G +Y+ PPL+ +E+GK+ Y Y EL++ + + + R KGLGEM +L
Sbjct: 529 ENGYVYIAQPPLFSIEKGKKTFYAYSPEELEQKLNDIGRERVL-VSRNKGLGEMDAEELG 587
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+TT++P+ R+L ++ +EDAAEA+ FS LMG +V+ R++ IQ A V NLD
Sbjct: 588 DTTMDPKNRVLLKVNLEDAAEADETFSILMGDKVEPRRDFIQQNARYVENLD 639
>gi|319936688|ref|ZP_08011101.1| DNA gyrase subunit B [Coprobacillus sp. 29_1]
gi|319808245|gb|EFW04810.1| DNA gyrase subunit B [Coprobacillus sp. 29_1]
Length = 640
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/649 (49%), Positives = 436/649 (67%), Gaps = 21/649 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
+EN V +Y IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AG+
Sbjct: 1 MEENKVEHSYDESDIQVLEGLEAVRKRPGMYIGTTSARGLHHLVWEIVDNSIDEALAGFC 60
Query: 128 SNIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+ I+V L + DN +P H T KS +ET+LTVLHAGGKFGG S
Sbjct: 61 NEIKVILEKGDIVKVIDNGRGMPTGKHAKTGKSTVETILTVLHAGGKFGGGGYKVSGG-- 118
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK-PVTTLTCHVLPVDSKDRQGTRIRF 237
LHGVG SVVNALSE LEV V R+G Y+Q++ +G PV L + D GT + F
Sbjct: 119 LHGVGASVVNALSEWLEVHVHREGHIYYQRFEKGGVPVGDLKI----IGDCDDTGTIVSF 174
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D +F +D++T+ RIRELAFLN L + L ++P K NEY + GG++EY
Sbjct: 175 KADPLIFNETTIYDYDTLNQRIRELAFLNKGLKLILEDHRNEPYKK--NEYHYEGGIKEY 232
Query: 298 VQWLNTDKKPLHDVVGFRKD-VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V +LN +K +H+ + + +D +D I +++ +Q+ +D Y + + N+I T +GGTH EG
Sbjct: 233 VAYLNRNKTAIHEEIIYVEDEIDDIKVEVGMQY-NDGYQPNIYSFCNNINTHEGGTHEEG 291
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ +LTR +N+ K + +K D SL+G+ REGLT IISV+ P+P++EGQTKT+LGN E
Sbjct: 292 FRLALTRVINNYAKNNNFLKKDDESLNGDDCREGLTAIISVKHPDPQYEGQTKTKLGNSE 351
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VRK+ + E L ++L +PD I++K++ A A +AAKRAR++ R+K+ L S +LP
Sbjct: 352 VRKIASNIISEALDKFLLENPDTASIIMNKAIVASHARMAAKRAREMTRRKTALDSIALP 411
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P E E+FIVEGDSAGGSAK GRDRR QAILPLRGKILNVE+ + N
Sbjct: 412 GKLADCSSKDPSECEVFIVEGDSAGGSAKMGRDRRTQAILPLRGKILNVEKARLDRILGN 471
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EI+++I A G G+ G++F LRYHKI+I+TDADVDG HIR L+LTF YR+ K L +E
Sbjct: 472 AEIRSMITAFGTGI-GDEFDISKLRYHKIVIMTDADVDGGHIRILMLTFLYRFLKPLIEE 530
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y PPLY ++ GK+ Y Y D EL+K+K NA Y+IQR+KGLGEM QLWET
Sbjct: 531 GFVYAAQPPLYLLKHGKEEHYLYSDYELEKLKEDLGPNAKYNIQRYKGLGEMNAEQLWET 590
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE R+L Q+ ++DA +A+ +F +LMG +V+ R+E IQ A LD
Sbjct: 591 TMDPENRLLWQIDLDDAMQADAMFDTLMGEKVEPRREFIQEHAQEAELD 639
>gi|317495092|ref|ZP_07953463.1| DNA gyrase, subunit B [Gemella morbillorum M424]
gi|316914799|gb|EFV36274.1| DNA gyrase, subunit B [Gemella morbillorum M424]
Length = 643
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/639 (49%), Positives = 440/639 (68%), Gaps = 21/639 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR RP MYIGST RGLHHLV+EI+DN++DEA AGY + I VA+
Sbjct: 15 YNADQIQVLEGLEAVRVRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGYCNTITVAIEK 74
Query: 137 DN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IPID+ T K ALE +LTVLHAGGKFGG S LHGVG SVV
Sbjct: 75 DNWIRVEDNGRGIPIDIQEQTGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVV 132
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +LE V RDG + K+ RG+ V +T + D+ GT +RF D ++F
Sbjct: 133 NALSTNLEAYVHRDGKIHSMKFERGEVVQGITV----IGETDKTGTTVRFKADPEIFQET 188
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++++ + RIRELAFLN +TI L+ E + EK + ++ + GGL EYV+ LN +K
Sbjct: 189 TVYEYDILRSRIRELAFLNKGITIVLKDERENQEKEE--DFCYEGGLLEYVEMLNENKDA 246
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + +++G +++++Q+ + YS +L YAN+I T +GGTH G K +LTR +N+
Sbjct: 247 LHEAIYVHGEMEGKEVEISMQYNT-GYSSNILSYANNINTHEGGTHESGFKTALTRIINA 305
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
GKK+K +K+K+ +L+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E
Sbjct: 306 YGKKNKLIKEKE-TLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSE 364
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
L +L +P V I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS
Sbjct: 365 ELDRFLLENPKVAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDA 424
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
E E+F+VEGDSAGGSAK GRD +FQAILPL+GKILNVE+ + ++EI++LI A+G
Sbjct: 425 AECELFLVEGDSAGGSAKLGRDSKFQAILPLKGKILNVEKVRIDKVLSSDEIRSLITAVG 484
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
+G+ GE + LRYHKI+I+TDADVDG+HIRTLLLTFF+RY + L D G +Y+ PPLY
Sbjct: 485 MGI-GETLNMDKLRYHKIVIMTDADVDGSHIRTLLLTFFFRYMRELIDAGYVYIARPPLY 543
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
++ GK+ YC+ + ELK+ F + Y++QR+KGLGEM +LW+TT++P+ R++ Q
Sbjct: 544 GLKVGKKEYYCHTEEELKQHIEEFAGDKKYAVQRYKGLGEMNAEELWDTTMDPKHRLMYQ 603
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ I DA A+ F +LMG +V+ R++ I +NA N++NLD
Sbjct: 604 VSIGDAQRADAAFDTLMGEKVEPRRKFIEENALNVINLD 642
>gi|193211690|ref|YP_001997643.1| DNA gyrase subunit B [Chlorobaculum parvum NCIB 8327]
gi|193085167|gb|ACF10443.1| DNA gyrase, B subunit [Chlorobaculum parvum NCIB 8327]
Length = 647
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/644 (49%), Positives = 429/644 (66%), Gaps = 28/644 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ IQVL+G+E VRKRPAMYIG RGLHHLVYEI+DN++DE AG+ I VA+
Sbjct: 16 YGATNIQVLDGIEHVRKRPAMYIGDIHSRGLHHLVYEIVDNSIDETLAGFNDYIHVAMNP 75
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SVV
Sbjct: 76 DGSVTVTDRGRGIPVDIHPVKKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE E V+RDG + Q Y RG P V V + D++GT++ F PD +F
Sbjct: 134 NALSEWCEAEVYRDGKIFRQTYKRGVP----QGGVEEVGTTDQKGTKVTFKPDPDIFKIT 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-K 306
+F + I R+RELAFLN L I ++ + E + F GGL E+V++ + ++
Sbjct: 190 -EFRKDIIIDRMRELAFLNSNLRIIVQDAEGFEET-----FHFEGGLREFVRFTDANRLS 243
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + + + + +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN
Sbjct: 244 LLKEPIFLSGERESTMVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLN 302
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ +K+ +K+ I+L+G+ +EGLT +ISV+VP P+FEGQTKT+LGN E + +V+ V
Sbjct: 303 AYAQKNDLLKNVKITLTGDDFKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVETIVN 362
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L E+ E +P L I+ K A + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 363 EQLAEFAESNPGTLKLIIEKVKGAAISREAARKAKELTRRKSVLESSGLPGKLADCSIND 422
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P+ E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I AL
Sbjct: 423 PDHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILAL 482
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G + E+F E LRY KIII+TDADVDGAHIRTLLLTFF+RY ++L + G +++ PPL
Sbjct: 483 GTSIGEEEFSPEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPL 542
Query: 607 YKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
Y V+ G++ QY +D+ E +++K A SIQR+KGLGEM P QLW TT++PE
Sbjct: 543 YLVKAGREQQYAWDEEERASITEQMKKLQKGKANVSIQRYKGLGEMNPEQLWSTTMDPEH 602
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R L Q+ +E+A EA+ VFS+LMG +V+ R+ I QNA + LD
Sbjct: 603 RSLLQVTVENAMEADQVFSTLMGDKVEPRRNFIEQNAKYVRRLD 646
>gi|320531090|ref|ZP_08032119.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
gi|320136672|gb|EFW28625.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
Length = 684
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/644 (51%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHRDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S++V V RDG Y ++RG TT H V + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGHIYEIAFARGN--TTEKLH--EVGTSETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEELRSE--TFHFDGGIRSFVSHLNR 282
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY + L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLSKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NP +
Sbjct: 581 QPPLYQIRKDKKHFYTYTDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPSE 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + ++ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLRVAAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|229099920|ref|ZP_04230843.1| DNA gyrase subunit B [Bacillus cereus Rock3-29]
gi|229118983|ref|ZP_04248328.1| DNA gyrase subunit B [Bacillus cereus Rock1-3]
gi|384184093|ref|YP_005569989.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis
CT-43]
gi|407707961|ref|YP_006831546.1| hypothetical protein MC28_4725 [Bacillus thuringiensis MC28]
gi|452196386|ref|YP_007476467.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228664508|gb|EEL20004.1| DNA gyrase subunit B [Bacillus cereus Rock1-3]
gi|228683535|gb|EEL37490.1| DNA gyrase subunit B [Bacillus cereus Rock3-29]
gi|326937802|gb|AEA13698.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis
CT-43]
gi|407385646|gb|AFU16147.1| DNA gyrase subunit B [Bacillus thuringiensis MC28]
gi|452101779|gb|AGF98718.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 640
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 129 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|429765449|ref|ZP_19297743.1| DNA gyrase, B subunit [Clostridium celatum DSM 1785]
gi|429186362|gb|EKY27309.1| DNA gyrase, B subunit [Clostridium celatum DSM 1785]
Length = 638
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 332/643 (51%), Positives = 447/643 (69%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIG+T RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 7 QSYDESQIQVLEGLEAVRKRPGMYIGTTSSRGLHHLVYEIVDNSIDEALAGFCKNIKVTI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ LHP KS +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 67 NEDNSITVIDDGRGMPVGLHPKMGKSTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EVTV R+G + QKYSRG + C + + D GT++ F PD ++F
Sbjct: 125 VVNALSEYCEVTVTREGYVWQQKYSRG----NVLCDLTKIGEDDGHGTKVVFKPDHEIFE 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T +F+ ++ R+RELAFLN + I L E+ + +Y + GG++E+V +LN +K
Sbjct: 181 TT-EFEFEILSSRLRELAFLNKGICITLED--KREEEEKIEKYHYEGGIKEFVSYLNRNK 237
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH+ + + DGI ++ALQ+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 238 EVLHESPIYVEGEKDGIIAEIALQY-NDGYNENLYSFANNIDTIEGGTHLAGFKSALTRA 296
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N K+ +K+ D +LSG+ REGLT +ISV++ P+FEGQTKT+LGN EVR VVD
Sbjct: 297 INDYAKRFGHIKENDKNLSGDDAREGLTAVISVKISEPQFEGQTKTKLGNSEVRGVVDSI 356
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E ++ +LE +P V I+ K+L A +A AA++AR+L R KSVL S+LPGKLADCSS
Sbjct: 357 VAEGVSIFLEENPAVGKIIIDKALMAARARDAARKARELTR-KSVLERSTLPGKLADCSS 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE++ + ++ I+++I
Sbjct: 416 KDPAECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKQRLDRILNSDTIRSMIT 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF +E LRY++III+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ P
Sbjct: 476 AFGAGI-GKDFDEEKLRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRPLIDGGHVYIAQP 534
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYKV +GK+ Y Y D EL + F + +IQR+KGLGEM QLW+TT++PE R
Sbjct: 535 PLYKVSKGKKESYAYTDEELDSILEEFGGKDNSTNIQRYKGLGEMNATQLWDTTMDPEHR 594
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+LK+ + DA A+ +F+ LMG +V+ R+E IQ NA+ + NLD
Sbjct: 595 ILKKASVSDAIAADEIFTILMGDKVEPRREFIQKNASKISNLD 637
>gi|313894727|ref|ZP_07828288.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976636|gb|EFR42090.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
Length = 684
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/644 (51%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHRDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S++V V RDG Y ++RG TT H V + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGHIYEIAFARGN--TTEKLH--EVGTSETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEELRSE--TFHFDGGIRSFVSHLNR 282
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLSVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY + L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLSKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NP +
Sbjct: 581 QPPLYQIRKDKKHFYTYTDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPSE 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + ++ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLRVAAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|229148043|ref|ZP_04276382.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24]
gi|228635468|gb|EEK91959.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24]
Length = 642
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/657 (50%), Positives = 442/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +D +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H D V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEDPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|358051218|ref|ZP_09145436.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
gi|357259294|gb|EHJ09133.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
Length = 644
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 435/642 (67%), Gaps = 19/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TENYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVI 70
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IQEDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V+R+ YHQ Y +G P L V + D GT IRF D +F
Sbjct: 129 SVVNALSEDLEVYVYRNDTIYHQAYKKGVPQFDLK----EVGTTDVTGTTIRFKADGSIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ T+ RIRELAFLN + I L K++ D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETQVYNYETLQQRIRELAFLNKGIEITL-KDERDKENIREDSYHYEGGIKSYVELLNEN 243
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PL+D + + D + +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPLYDEPIYIHQSKDDVEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN+ G SK +K+ L+GE REG+T I+S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNNYGLNSKIMKEDKERLTGEDTREGMTAIVSIKHSDPQFEGQTKTKLGNSEVRQIVDK 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ +L +P V I+ K + A A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARVIVDKGIMASHARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE EIF+VEGDSAGGS K GRD R QAILPLRGKILNVE+ + N EI+ +I
Sbjct: 423 SKVPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMI 482
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 483 TAFGTGIGG-DFDLSKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ 541
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GKQ Y ++D EL K+K+ +SI R+KGLGEM QLW+TT+NPE R
Sbjct: 542 PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSIARYKGLGEMNADQLWDTTMNPEHR 601
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L Q+ +EDA EA+ F LMG V+ R++ I++ A NLD
Sbjct: 602 SLLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|228942642|ref|ZP_04105174.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228975572|ref|ZP_04136124.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228982208|ref|ZP_04142497.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|410672382|ref|YP_006924753.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|423376715|ref|ZP_17353999.1| DNA gyrase subunit B [Bacillus cereus BAG1O-2]
gi|423386975|ref|ZP_17364230.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-2]
gi|423439810|ref|ZP_17416716.1| DNA gyrase subunit B [Bacillus cereus BAG4X2-1]
gi|423450029|ref|ZP_17426908.1| DNA gyrase subunit B [Bacillus cereus BAG5O-1]
gi|423462881|ref|ZP_17439649.1| DNA gyrase subunit B [Bacillus cereus BAG6O-1]
gi|423526693|ref|ZP_17503138.1| DNA gyrase subunit B [Bacillus cereus HuB1-1]
gi|423532238|ref|ZP_17508656.1| DNA gyrase subunit B [Bacillus cereus HuB2-9]
gi|423542492|ref|ZP_17518882.1| DNA gyrase subunit B [Bacillus cereus HuB4-10]
gi|423548723|ref|ZP_17525081.1| DNA gyrase subunit B [Bacillus cereus HuB5-5]
gi|423618807|ref|ZP_17594640.1| DNA gyrase subunit B [Bacillus cereus VD115]
gi|423621470|ref|ZP_17597248.1| DNA gyrase subunit B [Bacillus cereus VD148]
gi|228777560|gb|EEM25838.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|228784182|gb|EEM32209.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817068|gb|EEM63161.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|401127327|gb|EJQ35054.1| DNA gyrase subunit B [Bacillus cereus BAG5O-1]
gi|401168739|gb|EJQ75998.1| DNA gyrase subunit B [Bacillus cereus HuB4-10]
gi|401174840|gb|EJQ82047.1| DNA gyrase subunit B [Bacillus cereus HuB5-5]
gi|401252283|gb|EJR58544.1| DNA gyrase subunit B [Bacillus cereus VD115]
gi|401263225|gb|EJR69354.1| DNA gyrase subunit B [Bacillus cereus VD148]
gi|401630827|gb|EJS48625.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-2]
gi|401640960|gb|EJS58685.1| DNA gyrase subunit B [Bacillus cereus BAG1O-2]
gi|402421442|gb|EJV53695.1| DNA gyrase subunit B [Bacillus cereus BAG4X2-1]
gi|402422690|gb|EJV54918.1| DNA gyrase subunit B [Bacillus cereus BAG6O-1]
gi|402454565|gb|EJV86355.1| DNA gyrase subunit B [Bacillus cereus HuB1-1]
gi|402465099|gb|EJV96783.1| DNA gyrase subunit B [Bacillus cereus HuB2-9]
gi|409171511|gb|AFV15816.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
Length = 642
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V ++ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|423416596|ref|ZP_17393685.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-1]
gi|401109980|gb|EJQ17896.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-1]
Length = 642
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGTTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|52145204|ref|YP_081624.1| DNA gyrase subunit B [Bacillus cereus E33L]
gi|229094604|ref|ZP_04225671.1| DNA gyrase subunit B [Bacillus cereus Rock3-42]
gi|229159054|ref|ZP_04287110.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342]
gi|300118805|ref|ZP_07056525.1| DNA gyrase subunit B [Bacillus cereus SJ1]
gi|51978673|gb|AAU20223.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)
[Bacillus cereus E33L]
gi|228624473|gb|EEK81244.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342]
gi|228688851|gb|EEL42682.1| DNA gyrase subunit B [Bacillus cereus Rock3-42]
gi|298723773|gb|EFI64495.1| DNA gyrase subunit B [Bacillus cereus SJ1]
Length = 640
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 438/643 (68%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|228994212|ref|ZP_04154112.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442]
gi|228765664|gb|EEM14318.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442]
Length = 640
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 435/641 (67%), Gaps = 22/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG P L + D GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPAADLKV----IGETDHTGTITRFKPDPEIFKE 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D +T+A R+RELAFLN + + + + E Q E+ + GG++ YV+ LN K+
Sbjct: 184 TTEYDFDTLATRMRELAFLNRNIKLII---EDKRENKQKKEFHYEGGIKSYVEHLNRSKQ 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +
Sbjct: 241 PIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 300 NDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A
Sbjct: 420 DPSISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PP
Sbjct: 480 IGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KV++GK++QY Y+D EL+K+ + P++ IQR+KGLGEM P QLWETT++PE R L
Sbjct: 539 LFKVQQGKKIQYAYNDKELEKILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 599 LQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|229051162|ref|ZP_04194706.1| DNA gyrase subunit B [Bacillus cereus AH676]
gi|228722225|gb|EEL73626.1| DNA gyrase subunit B [Bacillus cereus AH676]
Length = 640
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 TYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|402304103|ref|ZP_10823182.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
gi|400376029|gb|EJP28922.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
Length = 684
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 329/644 (51%), Positives = 437/644 (67%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAV 112
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHRDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S++V V RDG Y ++RG TT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGHIYEISFARGN--TTEKLH--EIGTSETTGTRVHFVPDPEI 225
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEELRSE--TFHFDGGIRSFVSHLNR 282
Query: 304 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLSVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P++ EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 521
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE+F RY KIII+TDADVDGAHIRTLLLTFFYRY + L D G +Y+
Sbjct: 522 ITAFGTGI-GEEFDLSKRRYSKIIIMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIA 580
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + K+ Y Y D E K + + +IQR+KGLGEM P QLWETT+NP +
Sbjct: 581 QPPLYQIRKDKKHFYTYTDEEQAKKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPSE 639
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + ++ EDA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 640 RTMLRVAAEDAEAADELFTILMGDKVEPRRQFIEENARLVRNLD 683
>gi|145577983|gb|ABP82710.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar sotto]
Length = 632
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/642 (51%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIARP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|352516178|ref|YP_004885495.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
gi|348600285|dbj|BAK93331.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
Length = 649
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/648 (49%), Positives = 443/648 (68%), Gaps = 33/648 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V +
Sbjct: 15 YDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIQVIVEK 74
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG SVV
Sbjct: 75 DNSITVTDNGRGIPVDIQNKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVV 132
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ LEV V+++G Y+Q++ RGK +T + + + QGT + F PD ++F
Sbjct: 133 NALSKKLEVKVYKNGQIYYQEFHRGK----VTGDLKVIGETELQGTEVHFEPDSEIFNET 188
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-- 305
++F + +A RIRELAFLN L I++ ED PE+ Y + GG++ YV+ LN K
Sbjct: 189 VEFSFDKLATRIRELAFLNRGLHISI--EDRRPEEPVVKNYHYEGGIKSYVEHLNASKDV 246
Query: 306 ---KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+P++ + G ++D I +++++Q+ +D+Y ++ +AN+I T +GGTH G K +LT
Sbjct: 247 LFPEPIY-LEGQQQD---INVEVSIQY-TDSYHTNLMTFANNIHTYEGGTHEAGFKTALT 301
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N G K K +K+ D +LSGE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR V D
Sbjct: 302 RVINDYGHKQKLMKENDDNLSGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRTVTD 361
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E+ ++L +P + I+ K + A KA AAKRAR++ R+K L S+LPGKLADC
Sbjct: 362 RLFSEHFAKFLMENPSIGRRIVEKGMLASKARQAAKRAREVTRRKGALEISNLPGKLADC 421
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PE+SE+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SSRDPEKSELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRSL 481
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G GE+F RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 FTAMGTGF-GEEFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIA 540
Query: 603 VPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
PPLY V++GK ++Y + + EL++V S P + S+QR+KGLGEM QLW+TT+
Sbjct: 541 QPPLYGVKQGKNIRYVQPGEHAEEELQEVIDSLPQSPKPSVQRYKGLGEMDEHQLWQTTM 600
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
NPE R++ ++ IEDA EA+ VF LMG V+ R+ I+ A+ V NLD
Sbjct: 601 NPENRLMLRVSIEDAIEADQVFEMLMGDHVEPRRAFIEENAHYVQNLD 648
>gi|229164444|ref|ZP_04292372.1| DNA gyrase subunit B [Bacillus cereus R309803]
gi|228619049|gb|EEK75947.1| DNA gyrase subunit B [Bacillus cereus R309803]
Length = 640
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 129 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|224541292|ref|ZP_03681831.1| hypothetical protein CATMIT_00452 [Catenibacterium mitsuokai DSM
15897]
gi|224525796|gb|EEF94901.1| DNA gyrase, B subunit [Catenibacterium mitsuokai DSM 15897]
Length = 641
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 326/641 (50%), Positives = 431/641 (67%), Gaps = 20/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AG+ + I V LL
Sbjct: 8 YDESDIQVLEGLEAVRKRPGMYIGTTSARGLHHLVWEIVDNSIDEALAGFCNKIRVVLLP 67
Query: 137 -------DNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN +P ++ T K+ +ET+ TVLHAGGKFGG S LHGVG SVV
Sbjct: 68 GDVVKVIDNGRGMPTGMNVKTGKNTIETIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
NALSE LEV V R+G Y+Q++ G PV +L V+ ++ GT + F D ++FT
Sbjct: 126 NALSEWLEVYVHREGHIYYQRFENGGTPVGSLK--VVGDCEQEETGTTVVFKADPEIFTE 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+D+ ++ R+RELAFLN L + L E DP K +EY + GGL EYV +LN +K
Sbjct: 184 TTVYDYGVLSQRLRELAFLNKGLKLVLEDERLDPAK--VDEYHYEGGLREYVAFLNKNKT 241
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
PLHD ++ ++ I++++A+Q+ +D Y + + N+I T +GGTH EG + +LTR +
Sbjct: 242 PLHDHIIDCEDTMNDISVEIAMQY-NDGYQPNIYSFCNNINTHEGGTHEEGFRLALTRVI 300
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N+ K +KDKD SLSG+ REGLT I+SV+ P+P++EGQTKT+LGN EVRK+V +
Sbjct: 301 NNYAKSHNFLKDKDESLSGDDCREGLTAIVSVKHPDPQYEGQTKTKLGNAEVRKIVSTIL 360
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L ++L +PD I+ K A KA +AAKRAR++ R+K+ L S+LPGKLADCSS
Sbjct: 361 ANALDKFLLENPDTAKIIMDKVTLASKARMAAKRAREMTRRKTALDVSNLPGKLADCSSK 420
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P E EIFIVEGDSAGGSAK GRDR+ QAILPLRGKILNVE+ + N EI+++I A
Sbjct: 421 DPSECEIFIVEGDSAGGSAKSGRDRKIQAILPLRGKILNVEKARLERILGNAEIRSMITA 480
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G G+ G++F LRYHKI+I+TDADVDG HIR L+LTF YRY K L + G +Y PP
Sbjct: 481 FGTGI-GDEFDINKLRYHKIVIMTDADVDGGHIRILMLTFLYRYLKPLIENGYVYAAQPP 539
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY + GK Y Y D EL K+K NA Y+IQR+KGLGEM P QLWETT+NPE R+L
Sbjct: 540 LYLLRHGKDDHYLYSDYELDKLKEELGPNAKYTIQRYKGLGEMNPEQLWETTMNPENRVL 599
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ ++DA +A+ +F LMG RV+ R++ I +NA + NLD
Sbjct: 600 NRIQLDDAMQADQLFDMLMGERVEPRRDFIRENAKYVENLD 640
>gi|423399670|ref|ZP_17376843.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-2]
gi|423461727|ref|ZP_17438523.1| DNA gyrase subunit B [Bacillus cereus BAG5X2-1]
gi|423479640|ref|ZP_17456355.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-1]
gi|401134960|gb|EJQ42566.1| DNA gyrase subunit B [Bacillus cereus BAG5X2-1]
gi|401657791|gb|EJS75296.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-2]
gi|402425235|gb|EJV57390.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-1]
Length = 642
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 444/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMEEN----SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F I ++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETIVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|296127762|ref|YP_003635014.1| DNA gyrase subunit B [Brachyspira murdochii DSM 12563]
gi|296019578|gb|ADG72815.1| DNA gyrase, B subunit [Brachyspira murdochii DSM 12563]
Length = 637
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/643 (49%), Positives = 421/643 (65%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 6 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 65
Query: 135 LADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DN IP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 66 EKDNIIKVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V +DG Y Q Y RG P V V + + GT + F D +F
Sbjct: 124 VVNALSTELIAEVRKDGKLYRQVYHRGVPEEP----VKEVGTSTKNGTTVIFKADADIFE 179
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T + +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 180 TTV-YDYKILANRLRELAFLNRGIRITL--TDKREAETVSNEFYYEGGIEMFITHLNENK 236
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K LHD + K D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 237 KALHDKPIYLHKTEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 295
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 296 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 355
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +Y +P V+ +IL K +SA A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 356 VVEGLNDYFSQNPKVIKAILEKIISAANAREAARKARDLARRKNALESDSLPGKLADCSE 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
++ E+++VEGDSAGG+AK GRDR FQAILPLRGK+LNVE+ + NE ++ +I
Sbjct: 416 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIA 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G F +RY ++II+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VP
Sbjct: 476 ALGCGV-GASFDISKIRYGRVIIMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVP 534
Query: 605 PLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYK+ K+ Y Y D + K+ S + Y IQR+KGLGEM QLWETT+NPE R
Sbjct: 535 PLYKISFDKKNFTYAYSDEQRDKILSE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ Q++ EDA +A+ +FS LMG V R++ I+ NA + NLD
Sbjct: 594 LMYQVLTEDAEKADQLFSMLMGDEVKPRRDFIEANARYVKNLD 636
>gi|145577999|gb|ABP82718.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar roskildiensis]
Length = 632
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/643 (51%), Positives = 438/643 (68%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI PI + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSILVTDNGRGIPIGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVALQY-NERYTNHIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|145577973|gb|ABP82705.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 328/642 (51%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTSATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|384209248|ref|YP_005594968.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
gi|343386898|gb|AEM22388.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
Length = 636
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 315/643 (48%), Positives = 424/643 (65%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
N IP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 KKGNIIQVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V +DG Y Q Y RG P V V + + GT + F D ++F
Sbjct: 123 VVNALSTELIAEVNKDGKLYRQVYHRGIPEEP----VKEVGTSKKTGTTVTFKADDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T + +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTV-YDYKILANRLRELAFLNRGIRITLV--DEREAEVVSNEFYYEGGIEMFIAHLNENK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
KPLHD + K+ D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KPLHDKPIYLHKNEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKSKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
++ E+++VEGDSAGG+AK GRDR FQAILPLRGK+LNVE+ + NE ++ +I
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIA 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G F +RY ++II+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VP
Sbjct: 475 ALGCGV-GASFDISKIRYGRVIIMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVP 533
Query: 605 PLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYK+ K+ Y Y D + K+ + + Y IQR+KGLGEM QLWETT+NPE R
Sbjct: 534 PLYKISFDKKNFVYAYSDEQRDKILAE-NKDKKYDIQRYKGLGEMNADQLWETTMNPETR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ Q++ EDA +A+ +FS LMG V R++ I++ A V NLD
Sbjct: 593 LMYQVLTEDAEKADQLFSMLMGDEVKPRRDFIESNARYVKNLD 635
>gi|187934052|ref|YP_001884271.1| DNA gyrase subunit B [Clostridium botulinum B str. Eklund 17B]
gi|187722205|gb|ACD23426.1| DNA gyrase, B subunit [Clostridium botulinum B str. Eklund 17B]
Length = 635
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/644 (50%), Positives = 450/644 (69%), Gaps = 26/644 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NIEV
Sbjct: 5 NQKYDENQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCKNIEVK 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP +KSA+E ++T+LHAGGKFGG S LHGVG
Sbjct: 65 INKDNSITSSDDGRGMPVGMHPKMHKSAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE VTV R+G + Q+YS+GK + L + + + GT I F PD ++F
Sbjct: 123 SVVNALSEQCIVTVKREGHIWKQEYSKGKVLYDLK----QIGNTEESGTTIYFKPDAEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ FD +T++ R+RELAFLN + I L +D E+N Y++ GG++ +V +LN +
Sbjct: 179 DEVL-FDFDTLSQRLRELAFLNKGINIKLIDSRNDREEN----YYYEGGIKSFVSYLNRN 233
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K PLH + + + D +T++L LQ+ +D Y++ + +AN+I TI+GGTH+ G K +LTR
Sbjct: 234 KTPLHPEPIYVEGIKDKVTVELGLQY-NDGYTENLFSFANNIDTIEGGTHLVGFKTALTR 292
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N K+ +K+ D + SG+ +REGLT +ISV++ +P+FEGQTKT+LGN EV+ +VD
Sbjct: 293 AFNDYAKRFGFIKENDKNFSGDDIREGLTAVISVKIEDPQFEGQTKTKLGNSEVKGIVDS 352
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V EY+ +LE +P + I+ K+L A +A AA++AR+L R KSVL ++LPGKLADCS
Sbjct: 353 IVSEYIGIFLEENPGISKIIIDKALMAARAREAARKARELTR-KSVLERTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + +E I++++
Sbjct: 412 SKDPRECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRLDKILNSETIRSMV 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G+DF E +RY++III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+
Sbjct: 472 TAFGGGI-GKDFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL++V +GK+ Y Y D+EL +V + IQR+KGLGEM QLW+TT++P +
Sbjct: 531 PPLFRVGKGKKEVYAYSDSELDQVLLDMGGKDTSVDIQRYKGLGEMNATQLWDTTMDPAK 590
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L + IEDA A+ +F+ LMG +V+ R+E I QNA N+VNLD
Sbjct: 591 RILLKAEIEDAMAADEIFTILMGEKVEPRREFIEQNAKNVVNLD 634
>gi|423388220|ref|ZP_17365446.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-3]
gi|401643408|gb|EJS61105.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-3]
Length = 642
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 329/657 (50%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGTTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+++ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELERILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|383752835|ref|YP_005431738.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381364887|dbj|BAL81715.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 672
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/644 (50%), Positives = 438/644 (68%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQ+LEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AGY I+V
Sbjct: 41 VDADYGAEQIQILEGLEAVRMRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDKIDV 100
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 101 TIHRDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 157
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S+EV V RDG + + RG+ V L HV + GTR+ F PD ++
Sbjct: 158 VSVVNALSTSMEVQVKRDGKIHEISFKRGETVEKL--HV--TGETEITGTRVHFVPDPEI 213
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ + ++T+ R+RELAFLN +TI L E + +++ ++ F GG+ +V+ LN
Sbjct: 214 FSVTT-YSYDTLKHRLRELAFLNHGITIVLNDERGEELRSE--QFHFEGGISSFVEHLNR 270
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ ++ + + F D +++ALQ+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 271 KKEKINPEPIYFNGTKDDTVVEIALQY-NDSYQENIYSFVNNINTEEGGTHLAGFKLALT 329
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N +K +KDKD +LSG+ VREGLT +IS++V +P+FEGQTKT+LGN EVR +VD
Sbjct: 330 RAANDFARKQNILKDKDGNLSGDDVREGLTAVISLKVRDPQFEGQTKTKLGNSEVRGIVD 389
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L+EY E +P + + K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 390 SIVTEGLSEYFEENPTITKKFIEKAIMAARAREAARKARELTRRKNALEVSSLPGKLADC 449
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE +EI++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 450 SVKDPEMAEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 509
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ +DF RY KIII+TDADVDGAHIRTLLLTF YRY K L + G +++
Sbjct: 510 ITAFGTGIS-DDFDLSKRRYGKIIIMTDADVDGAHIRTLLLTFLYRYMKPLIEHGHVFIA 568
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ +GK+ Y Y D EL K + ++QR+KGLGEM P QLWETT++P
Sbjct: 569 QPPLYQIRKGKKHWYTYSDEELAKKLDEVGRDG-STVQRYKGLGEMNPEQLWETTMDPAG 627
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + ++ + DA A+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 628 RTMLRVEMADAEAADELFTILMGDKVEPRRQFIEENAKLVRNLD 671
>gi|323703937|ref|ZP_08115567.1| DNA gyrase, B subunit [Desulfotomaculum nigrificans DSM 574]
gi|323531095|gb|EGB21004.1| DNA gyrase, B subunit [Desulfotomaculum nigrificans DSM 574]
Length = 636
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 332/643 (51%), Positives = 440/643 (68%), Gaps = 29/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+ + I V +
Sbjct: 8 YSADQIQVLEGLEAVRRRPGMYIGSTSSRGLHHLVYEVVDNSIDEALAGFCNRISVVIHK 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+DLHP K A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 68 DNSVTVEDNGRGIPVDLHPKVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV + R+G YHQ YSRG PV+ L + GT++ F PD ++F
Sbjct: 126 NALSEKLEVEIKRNGNIYHQAYSRGVPVSELKI----IGKSKSTGTKVTFKPDPEIFEET 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F T+ R+RELA+LN + I ++ E DP Q + F GG+ ++V+ LN +K+
Sbjct: 182 T-FSLETLVQRLRELAYLNKGVKITIKDERKDPPVEQ--TFQFDGGIRDFVKHLNRNKQV 238
Query: 308 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
LH V G ++ I +++ALQ+ +D Y++ +L +AN+I T+DGGTH G K +LTR
Sbjct: 239 LHSKPIYVTGEKEQ---IIVEIALQY-NDTYNENILSFANNIHTVDGGTHEIGFKTALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+ +K+ D +LSGE +REG T +ISV+V P+FEGQTKT+LGN EVR +VD
Sbjct: 295 VVNDYGRNHNLLKNSDPNLSGEDIREGATVVISVKVREPQFEGQTKTKLGNSEVRGIVDS 354
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ L YLE +P V I+ K+++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 355 IFADGLATYLEENPTVGKRIIEKAITAARAREAARKARELTRRKSALDTMSLPGKLADCS 414
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 415 EKDPSVSELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKILANEEIRAMI 474
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G+DF RYHKIII+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 475 TALGCGI-GQDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFYRHMRPLIEAGYVYIAQ 533
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL++V +GK Y Y D EL+++ + + +IQR+KGLGEM P QLWETT++P+ R
Sbjct: 534 PPLFRVRKGKLDSYVYSDHELEELLKRVGYDNV-NIQRYKGLGEMNPEQLWETTMDPDTR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ Q+ +EDA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 593 TVLQVTLEDAIEADATFSMLMGDRVEPRRDFIQENAQYVRNLD 635
>gi|228995401|ref|ZP_04155073.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17]
gi|229003015|ref|ZP_04160874.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4]
gi|228758243|gb|EEM07429.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4]
gi|228764354|gb|EEM13229.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17]
Length = 640
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 435/641 (67%), Gaps = 22/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG P L + D GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPAADLKV----IGETDHTGTITRFKPDPEIFKE 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D +T+A R+RELAFLN + + + + E Q E+ + GG++ YV+ LN K+
Sbjct: 184 TTEYDFDTLATRMRELAFLNRNIKLII---EDKRENKQKKEFHYEGGIKSYVEHLNRSKQ 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +
Sbjct: 241 PIHEEPVYVDGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 300 NDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A
Sbjct: 420 DPSISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PP
Sbjct: 480 IGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KV++GK++QY Y+D EL+K+ + P++ IQR+KGLGEM P QLWETT++PE R L
Sbjct: 539 LFKVQQGKKIQYAYNDKELEKILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 599 LQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|404369616|ref|ZP_10974950.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
gi|226914440|gb|EEH99641.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
Length = 637
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 333/645 (51%), Positives = 454/645 (70%), Gaps = 27/645 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+++Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ + I VA
Sbjct: 6 NQSYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGFCTEISVA 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P +HP KS +E ++TVLHAGGKFGG S LHGVG
Sbjct: 66 INEDNSITVIDNGRGMPTGIHPKMGKSTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EVTV R+G + QKYSRG VT L+ + + GT++ F PD ++F
Sbjct: 124 SVVNALSEWCEVTVSREGDIWQQKYSRGNAVTDLS----KIGKTEEHGTKVSFKPDTEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP-EKNQYNEYFFAGGLEEYVQWLNT 303
++D + +A R+RELAFLN + I L SD E+ + Y + GG++E+V +L+
Sbjct: 180 EET-EYDFDILANRLRELAFLNKGIKIIL----SDAREEGKTEVYHYEGGIKEFVSYLSR 234
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LH D + + DGI ++++LQ+ +D+Y++ + +AN+I TI+GGTH+ G K +LT
Sbjct: 235 NKEVLHQDPIYIEGEKDGIIVEISLQY-NDSYTENLYSFANNIDTIEGGTHLSGFKTALT 293
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N GKK +K+ D +LSG+ +REGLT ++SV++ P+FEGQTKT+LGN EVR VVD
Sbjct: 294 RVINDYGKKFNHLKENDKNLSGDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRGVVD 353
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E ++ +LE +P + I+ K+L A +A AA++AR+L R KSVL SSLPGKLADC
Sbjct: 354 SIVGEGVSIFLEENPGIGKIIIDKALMAARARDAARKARELTR-KSVLERSSLPGKLADC 412
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P E EI+IVEGDSAGGSAKQGR+RRFQAILPLRGKILNVE++ + + I+++
Sbjct: 413 SSKDPLECEIYIVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKQRLDRILTADSIKSM 472
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
+ A G G+ G+DF +E LRY++III+TDADVDGAHIRTLLLTFF+RY + L D G +Y+
Sbjct: 473 VTAFGAGI-GDDFDEEKLRYNRIIIMTDADVDGAHIRTLLLTFFFRYMRGLLDGGHVYIA 531
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY+V++ K+ Y Y DAEL+K+ S + +IQR+KGLGEM QLW+TT++PE
Sbjct: 532 QPPLYQVKKNKKEYYAYSDAELEKLLSEIGGKDNSTNIQRYKGLGEMNANQLWDTTMDPE 591
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+R+L + +EDA A+ +F+ LMG +V+ R+E IQ NA + NLD
Sbjct: 592 KRVLLKATVEDAIAADEIFTILMGDKVEPRREFIQKNAKKVSNLD 636
>gi|399924562|ref|ZP_10781920.1| DNA gyrase subunit B [Peptoniphilus rhinitidis 1-13]
Length = 637
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/643 (48%), Positives = 446/643 (69%), Gaps = 25/643 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGL+ VRKRP MYIGSTG RGLHHLVYE++DN++DEA AG +I V +
Sbjct: 8 YDASDIQVLEGLDPVRKRPGMYIGSTGARGLHHLVYEVVDNSIDEALAGICDHIIVKINK 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ HP T KS +ETVLT+LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 68 DGSVEISDNGSGIPVATHPQTGKSTVETVLTILHAGGKF--DNSAYKVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L T+ RDG Y Q+++RGK + L +V+ K+ GT I F PD +F T
Sbjct: 126 NALSNKLVATIKRDGKIYRQEFARGKRKSEL--NVIGKTKKEDTGTTIYFEPDDTIFET- 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++F + ++ R RE+AFLN + I E D KN Y + GG++ +V+++N KKP
Sbjct: 183 VEFSFDVLSKRFREMAFLNKGIKI----EFIDERKNIKEIYHYEGGIKSFVEFINEKKKP 238
Query: 308 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+HD + + ++ + +++A+Q+ +D+YS+ +L +AN+I T +GG+H+ G +++LTRTLN
Sbjct: 239 IHDEIIYIDEIREETAVEIAIQY-TDSYSEVVLAFANNINTEEGGSHLSGFRSALTRTLN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+K+ +K+K+ +LSGE VREG++ +ISV++P+P+FEGQTK +LGN E R ++D +
Sbjct: 298 DYGRKNNIIKEKEENLSGEDVREGISAVISVKLPDPQFEGQTKAKLGNSETRGIIDSVLS 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+ +LE +P V IL K+LSA +A AA+RARDL R+K+ + S +LPGKL+DC +
Sbjct: 358 EELSAFLEENPKVGKQILDKALSARRAREAARRARDLTRKKNNIESMTLPGKLSDCQNDD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P +EIF+VEG+SAGGSAK GRD +QAILPLRGKI+NVE+ M + EI+ +I A
Sbjct: 418 PSRNEIFLVEGNSAGGSAKDGRDSAYQAILPLRGKIMNVEKARLDKMLNSSEIRAMITAF 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F + LRY KIII+TDADVDGAHI TLLLTFF+RY K L +EG +YV PL
Sbjct: 478 GTGI-GEEFDIKKLRYDKIIIMTDADVDGAHIMTLLLTFFFRYMKPLIEEGHVYVAQAPL 536
Query: 607 YKVERGKQV-QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
+ +E+G ++ +YC+++ EL+ + + +I+R+KGLGEM P QLWETT+NP+ R+L
Sbjct: 537 FGIEKGTKILRYCHNEKELRLAVKEYKDTKI-NIKRYKGLGEMDPEQLWETTMNPDNRLL 595
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 708
++ I+D EA+ F+ LMG V+ R+E I N V D++D
Sbjct: 596 LKVNIDDITEADDTFTVLMGTEVEPRREFI--TENAVYADYID 636
>gi|307352947|ref|YP_003893998.1| DNA gyrase subunit B [Methanoplanus petrolearius DSM 11571]
gi|307156180|gb|ADN35560.1| DNA gyrase, B subunit [Methanoplanus petrolearius DSM 11571]
Length = 640
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 336/647 (51%), Positives = 447/647 (69%), Gaps = 29/647 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + I VLEGLE VR+RPAMYIGST RGLHHLVYE++DNAVDEA AG +I V L
Sbjct: 5 NYNASNITVLEGLEPVRERPAMYIGSTDVRGLHHLVYEVVDNAVDEALAGVCDHIIVTLG 64
Query: 136 ADNS---------IPID-LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D + IP+D + KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 RDGTCTVEDNGRGIPVDIMEEQDGKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWPDKQV 243
VVNALSE L+V V+RDG Y ++RG + LT + P D+ ++ GT+I F PD +
Sbjct: 123 VVNALSEFLQVEVFRDGYIYDMGFARGGLKSDLTSRKNAAP-DAFEKHGTKISFKPDALI 181
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 302
F T + FD++ ++ R+RELAFLN +TI E SD E++ Y + F + GG+ E+V +L
Sbjct: 182 FET-VTFDYDILSHRMRELAFLNRGITI----EISD-ERSGYADIFNYEGGISEFVTYLI 235
Query: 303 TDKKPLH-DVVGF-RKDVDGIT-IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
T K+ +H DV+ F KD +T +++ALQ+ S AYS+TM+ + NS+ T +GGTH+EG ++
Sbjct: 236 TGKETVHPDVIYFDTKDAASMTEVEVALQY-STAYSETMMTFVNSVNTREGGTHLEGFRS 294
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N K + +K SL GE VREGL +IS++V NP+FEGQTK RLGN V+
Sbjct: 295 ALTRAINKSAKDNNLMKGMSESLKGEDVREGLVTVISLKVANPQFEGQTKMRLGNSNVKG 354
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V + LTEY E +P V+ +I+SK++ A +A AA++AR+L R+KS L S LPGKL
Sbjct: 355 IVDSLVYQSLTEYFEENPKVIQAIVSKAVGAARAREAARKARELARRKSTLESGGLPGKL 414
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P +SEI+IVEGDSAGGSAKQGR R+FQAILPLRGKILNVE+ + + KN EI
Sbjct: 415 ADCSERDPSKSEIYIVEGDSAGGSAKQGRSRQFQAILPLRGKILNVEKANPHRILKNAEI 474
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q LI A+G G GE F E RYH II +TDADVDGAHI TLLLTFFYRY L ++G I
Sbjct: 475 QTLISAIGCGF-GESFDVEKARYHHIIFMTDADVDGAHICTLLLTFFYRYMPELIEKGYI 533
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPL++V +GK +Y + + E+K+ F + S+QR+KGLGEM QLW TT+
Sbjct: 534 YIAQPPLFRVAKGKNEKYAFSEEEMKRYVKEFGDKGV-SVQRYKGLGEMNADQLWHTTMA 592
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
PE R+LKQ+ + +A+ A+ +FS LMG V+ RKE +I+++ + NLD
Sbjct: 593 PESRVLKQVSVIEASYADEIFSKLMGDDVEARKEFIIRHSKEVTNLD 639
>gi|403669915|ref|ZP_10935091.1| DNA gyrase subunit B [Kurthia sp. JC8E]
Length = 639
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/644 (48%), Positives = 435/644 (67%), Gaps = 22/644 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV+ Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+A++I
Sbjct: 7 PVA--YDADQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGFATDIV 64
Query: 132 VALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
VA+ DN IP+D K A+E ++TVLHAGGKFGG S LHGV
Sbjct: 65 VAIEKDNWIRVEDNGRGIPVDTQEKVGKPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGV 122
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G SVVNALS V V RDG + K+ RG+ V L + D GT RF D +
Sbjct: 123 GASVVNALSTQTIVQVHRDGHIHEIKFERGQTVQELKV----IGDTDHNGTTTRFKADPE 178
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F ++ + +A R+RELA+LN + I++ E E+ ++Y + GG++ YV+ +N
Sbjct: 179 IFKETTVYEFDILAHRVRELAYLNRGIRISIIDEREGQERR--SDYHYEGGIKSYVEHIN 236
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+P+H+ + + + DGI+I++A+Q+ S ++ + +AN+I T +GGTH G K +LT
Sbjct: 237 EKKEPIHEAIDLKGEKDGISIEIAMQYNS-GFATNIFSFANNINTYEGGTHESGFKTALT 295
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +K D +LSGE VREGL I+S++ P+P+FEGQTKT+LGN EV + +
Sbjct: 296 RVINDYARKNSLLKSADANLSGEDVREGLVAIVSIKHPDPQFEGQTKTKLGNSEVSTITN 355
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E+ +L +P V +I+ K L A +A +AAK+AR++ R+KS L SSLPGKLADC
Sbjct: 356 SLFSEHFERFLLENPTVARTIVDKGLIASRARVAAKKAREMTRRKSALEVSSLPGKLADC 415
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE EI+IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N EI+ +
Sbjct: 416 SSRHPEECEIYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAM 475
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ GE+F E RYHKI+I+TDADVDGAHIRTLLLTFF+R+ + L + G +Y+
Sbjct: 476 ITAIGTGI-GEEFNLEKARYHKIVIMTDADVDGAHIRTLLLTFFFRFMRPLIEAGYVYIA 534
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V++GK ++YCY DAEL+++ S +QR+KGLGEM QLW+TT++PE
Sbjct: 535 QPPLYQVKQGKHLEYCYSDAELQEILSGLSQQPKPMVQRYKGLGEMNADQLWDTTMDPEH 594
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L Q+ ++DA EA+ F LMG V+ R++ I +NA + NLD
Sbjct: 595 RVLLQVELDDALEADRAFEDLMGDDVEPRRKFIHENAVYVENLD 638
>gi|188588443|ref|YP_001919471.1| DNA gyrase subunit B [Clostridium botulinum E3 str. Alaska E43]
gi|251778873|ref|ZP_04821793.1| DNA gyrase, B subunit [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188498724|gb|ACD51860.1| DNA gyrase, B subunit [Clostridium botulinum E3 str. Alaska E43]
gi|243083188|gb|EES49078.1| DNA gyrase, B subunit [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 635
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 330/648 (50%), Positives = 450/648 (69%), Gaps = 34/648 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V
Sbjct: 5 NQKYDENQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCKNIKVK 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP +KSA+E ++T+LHAGGKFGG S LHGVG
Sbjct: 65 INKDNSITSSDDGRGMPVGMHPKMHKSAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE VTV R+G + Q+YS+GK + L + + GT I F PD ++F
Sbjct: 123 SVVNALSEQCIVTVKREGHIWQQEYSKGKVLYDLK----QIGDTEESGTTIYFKPDAEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++FD +T++ R+RELAFLN + I L D E+N Y++ GG++ +V +LN +
Sbjct: 179 D-EVEFDFDTLSQRLRELAFLNKGINITLIDCRDDREEN----YYYEGGIKSFVAYLNRN 233
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K PLH V G + D +T++L LQ+ +D Y++ + +AN+I TI+GGTH+ G K +
Sbjct: 234 KTPLHPEPIYVEGIK---DKVTVELGLQY-NDGYTENLFSFANNIDTIEGGTHLVGFKTA 289
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR N K+ +K+ D + SG+ +REGLT +ISV++ +P+FEGQTKT+LGN EV+ +
Sbjct: 290 LTRAFNDYAKRFGFIKENDKNFSGDDIREGLTAVISVKIEDPQFEGQTKTKLGNSEVKGI 349
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V EY+ +LE +P I+ K+L A +A AA++AR+L R KSVL ++LPGKLA
Sbjct: 350 VDSIVSEYIGIFLEENPGTSKIIIDKALMAARAREAARKARELTR-KSVLERTTLPGKLA 408
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + +E I+
Sbjct: 409 DCSSKDPRECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRLDKILNSETIR 468
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+++ A G G+ G+DF E +RY++III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y
Sbjct: 469 SMVTAFGGGI-GKDFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVY 527
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSF--PSNALYSIQRFKGLGEMMPVQLWETTL 658
+ PPL++V +GK+ Y Y DAEL +V N++ IQR+KGLGEM QLW+TT+
Sbjct: 528 IAQPPLFRVGKGKKETYAYSDAELDQVLQDMGGKDNSV-DIQRYKGLGEMNATQLWDTTM 586
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+P +R+L + IEDA A+ +F+ LMG +V+ R+E I QNA N+VNLD
Sbjct: 587 DPSKRILLKAEIEDAMAADEIFTILMGEKVEPRREFIEQNAKNVVNLD 634
>gi|229035151|ref|ZP_04189097.1| DNA gyrase subunit B [Bacillus cereus AH1271]
gi|228728217|gb|EEL79247.1| DNA gyrase subunit B [Bacillus cereus AH1271]
Length = 640
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/641 (50%), Positives = 436/641 (68%), Gaps = 22/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I ++ +T+A R+RELAFLN + + + + E Q E+ + GG++ YV+ LN K+
Sbjct: 184 TIVYEFDTLATRMRELAFLNRNIKLII---EDKREHKQKKEFHYEGGIKSYVEHLNRSKQ 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +
Sbjct: 241 PIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVI 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 300 NDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVF 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A
Sbjct: 420 DPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PP
Sbjct: 480 IGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R L
Sbjct: 539 LFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSL 598
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 599 LQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|423394308|ref|ZP_17371509.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-1]
gi|423410273|ref|ZP_17387420.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-3]
gi|401648270|gb|EJS65866.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-3]
gi|401658679|gb|EJS76169.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-1]
Length = 642
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/657 (50%), Positives = 442/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V RDG ++QKY RG P L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPAADLKV----IGDTDKTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V ++ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|218283252|ref|ZP_03489313.1| hypothetical protein EUBIFOR_01902 [Eubacterium biforme DSM 3989]
gi|218216007|gb|EEC89545.1| hypothetical protein EUBIFOR_01902 [Eubacterium biforme DSM 3989]
Length = 655
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/646 (48%), Positives = 433/646 (67%), Gaps = 25/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V +Y ++ IQVLEGLEAVR RP MYIGST RGLHHLV+EI+DN +DEA AG+A+ I+V
Sbjct: 23 VEHSYTADDIQVLEGLEAVRLRPGMYIGSTSARGLHHLVWEIVDNGIDEALAGFANRIDV 82
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DN I P+ +H T SA+ET++TVLHAGGKFGG + Y VSGGLHGVG
Sbjct: 83 TIEPDNIIAVRDNGRGMPVGIHEKTGISAVETIMTVLHAGGKFGGGA--YKVSGGLHGVG 140
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
SVVNALSE LEVTV++DG Y ++ G V L + GT +RF D Q
Sbjct: 141 ASVVNALSEWLEVTVFQDGKIYFIRFENGGHAVEPLKV----IGETTETGTLVRFKADSQ 196
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F +D+ + R+R+LAFLN + + L D N+Y + GG+ EYVQ+LN
Sbjct: 197 IFKDTTVYDYEILNSRLRQLAFLNKDIRLTLT--DKRTPDGLSNDYKYEGGIIEYVQFLN 254
Query: 303 TDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+K + D V + + + DGI ++ALQ+ +D Y ++ + N+I T +GG H +G + +L
Sbjct: 255 KNKSTISDKVIYVEGLQDGILAEVALQY-NDGYQSSIYSFCNNIHTHEGGYHEDGFRMAL 313
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N+ K + +K KD +LS + V+EGL IISV+ P+P++EGQTKT+LGN EVRK+V
Sbjct: 314 TRCINTYAKNNNMIK-KDETLSQDDVKEGLVAIISVKHPDPQYEGQTKTKLGNSEVRKIV 372
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS-SSLPGKLA 480
E + + +PD+ +I+ K+ A KA +AAK+AR+L R+KS L SSLPGKL
Sbjct: 373 SNIAGEQINRFFLENPDIAKAIVEKAEIASKARIAAKKARELTRRKSALDGISSLPGKLT 432
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS E EI+IVEGDSAGGSAKQGRD + QAILPLRGKILNVE+ +++N+EI+
Sbjct: 433 DCSSKDASECEIYIVEGDSAGGSAKQGRDAKTQAILPLRGKILNVEKARTHRIFENQEIR 492
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
++I A G G++ ED LRYHKI+I+TDADVDG+HI TL+LTF YR+ K + + G +Y
Sbjct: 493 SMITAFGCGIQ-EDVDVSKLRYHKIVIMTDADVDGSHICTLMLTFLYRFMKPVIEGGYVY 551
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYKV++GK++ Y Y + E+ +++ F Y +QR+KGLGEM QLWETT++P
Sbjct: 552 IAQPPLYKVQKGKKIAYAYKEQEMDQLREEFKDG--YKVQRYKGLGEMDAEQLWETTMDP 609
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDH 706
R+LK++ I+DA EA+ VF LMG V+ R+E IQ A NLD+
Sbjct: 610 HHRVLKRVTIDDAMEADSVFDMLMGEDVEPRREYIQENAVYANLDY 655
>gi|403389401|ref|ZP_10931458.1| DNA gyrase subunit B [Clostridium sp. JC122]
Length = 635
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/647 (50%), Positives = 450/647 (69%), Gaps = 31/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ +NI+V
Sbjct: 4 NKVYDENQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGFCNNIKVT 63
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP +E ++TVLHAGGKFGG S LHGVG
Sbjct: 64 IHEDNSITVEDDGRGMPVGIHPKLKIPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE V V RDG + + +SRGK ++ D GTRI F D ++F
Sbjct: 122 SVVNALSEICTVEVKRDGHIWKETFSRGKVLSPFEV----AGDTDDHGTRIYFKADPEIF 177
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+ +D++T++ R+REL+FLN + I L +D + + E+ + GG++ +V++LN +
Sbjct: 178 DD-VTYDYDTLSQRLRELSFLNKGIRITL----TDEREGKSQEFHYEGGIKSFVEYLNRN 232
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K +H+ + G + D T+++ALQ+ +D+Y++ + +AN+I TI+GGTH+ G KA+
Sbjct: 233 KGKIHNEPIYIEGIKDDC---TVEIALQY-NDSYNENLFSFANNIDTIEGGTHLVGFKAA 288
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N KK +K+ D +LSGE VREGLT ++SV++ +P+FEGQTKT+LGN +VR +
Sbjct: 289 LTRVINDYAKKFGHLKENDKNLSGEDVREGLTAVVSVKITDPQFEGQTKTKLGNSQVRGI 348
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ + +T +LE +P V SI+ K L+A +A AAK+AR+L R+KSVL S+SLPGKLA
Sbjct: 349 VESIANDSITSFLEENPQVGKSIIDKGLNAARAREAAKKARELTRRKSVLESTSLPGKLA 408
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS PEE EI+IVEGDSAGGSAKQGR+R+FQAILPLRGKI+NVE++ M ++ I+
Sbjct: 409 DCSSKNPEECEIYIVEGDSAGGSAKQGRNRKFQAILPLRGKIMNVEKQRLDKMLNSDTIK 468
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
++I A G G+ G+DF +RYHKIII+TDADVDGAHIRTLLLTFFYRY + L DEG +Y
Sbjct: 469 SMITAFGGGI-GKDFDVSKIRYHKIIIMTDADVDGAHIRTLLLTFFYRYMRELVDEGHVY 527
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLY++++GK Y Y D EL+ ++ ++ IQR+KGLGEM QLW+TT+N
Sbjct: 528 IAQPPLYRLKKGKNEYYTYSDKELENLIQEVGGKDSSVDIQRYKGLGEMNAEQLWDTTMN 587
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
PE R L ++ +EDA A+ +F+ LMG +V+ R+E I +NA ++NLD
Sbjct: 588 PENRTLLKVDVEDAMAADEIFTILMGDKVEPRREFIEENAKKVINLD 634
>gi|429124642|ref|ZP_19185174.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
gi|426279415|gb|EKV56438.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
Length = 636
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 317/643 (49%), Positives = 421/643 (65%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DN IP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 EKDNIIKVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V +DG Y Q Y RG P V V + GT + F D +F
Sbjct: 123 VVNALSTELIAEVRKDGKLYRQVYHRGVPEEP----VKEVGTSTSNGTTVTFKADADIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T I +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTI-YDYKILANRLRELAFLNRGIRITL--TDKREAEVVSNEFYYEGGIEMFITHLNENK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K LHD + K D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KALHDKPIYLHKTEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
++ E+++VEGDSAGG+AK GRDR FQAILPLRGK+LNVE+ + NE ++ +I
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIA 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G F +RY ++II+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VP
Sbjct: 475 ALGCGV-GSSFDISKIRYGRVIIMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVP 533
Query: 605 PLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYK+ K+ Y Y D + K+ S + Y IQR+KGLGEM QLWETT+NPE R
Sbjct: 534 PLYKISFDKKNFVYAYSDEQRDKILSE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ Q++ EDA +A+ +FS LMG V R++ I++ A V NLD
Sbjct: 593 LMYQVLTEDAEKADQLFSMLMGDEVKPRRDFIESNARYVKNLD 635
>gi|229015410|ref|ZP_04172416.1| DNA gyrase subunit B [Bacillus cereus AH1273]
gi|229026934|ref|ZP_04183257.1| DNA gyrase subunit B [Bacillus cereus AH1272]
gi|228734392|gb|EEL85063.1| DNA gyrase subunit B [Bacillus cereus AH1272]
gi|228745889|gb|EEL95885.1| DNA gyrase subunit B [Bacillus cereus AH1273]
Length = 640
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGTTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 129 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+++ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKVQQGKKIQYAYNDKELERILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|225862062|ref|YP_002747440.1| DNA gyrase, B subunit [Bacillus cereus 03BB102]
gi|225788933|gb|ACO29150.1| DNA gyrase, B subunit [Bacillus cereus 03BB102]
Length = 640
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/643 (50%), Positives = 438/643 (68%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I ++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TIVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|168183732|ref|ZP_02618396.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|237793326|ref|YP_002860878.1| DNA gyrase subunit B [Clostridium botulinum Ba4 str. 657]
gi|182673147|gb|EDT85108.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|229263377|gb|ACQ54410.1| DNA gyrase, B subunit [Clostridium botulinum Ba4 str. 657]
Length = 637
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 331/643 (51%), Positives = 448/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE V V RDG + QKY RG P T L V ++ GT+I F PD ++F
Sbjct: 125 VVNALSEHCNVEVRRDGHIWLQKYERGIPKTGLDI----VGDTEKHGTKIYFKPDVEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F E +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFNLEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELVEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + + +IQR+KGLGEM P QLWETT+NPE R
Sbjct: 534 PLYRIYKAKKELYVYSDKELDEALLELGGKDTNTNIQRYKGLGEMDPEQLWETTMNPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLD 705
L Q+ IEDA A+ +F+ LMG +V+ R++ I+N A+ +VNLD
Sbjct: 594 TLLQVTIEDAMAADEIFTILMGTKVEPRRDFIENNADKVVNLD 636
>gi|145577987|gb|ABP82712.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar wratislaviensis]
Length = 632
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEAIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWET ++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETAMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|218961619|ref|YP_001741394.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans]
gi|167730276|emb|CAO81188.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 632
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/644 (48%), Positives = 439/644 (68%), Gaps = 27/644 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S TY + I+VL+GLEAVRKRPAMYIG T RGLHHLVYE++DN++DEA AGY I
Sbjct: 3 SSTYTASNIKVLKGLEAVRKRPAMYIGGTSERGLHHLVYEVIDNSIDEALAGYCDEIICT 62
Query: 134 L-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ + DN IP+D+ A++ VLTVLHAGGKF S Y V+GGLHGVG+
Sbjct: 63 ITTEGNIRVEDNGRGIPVDIQKDMGVPAVQVVLTVLHAGGKFDDKS--YKVAGGLHGVGV 120
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV +++DG EY ++ RG PVT L + ++ GT + F PD +F
Sbjct: 121 SVVNALSEFLEVNIFKDGKEYFMRFERGLPVTELQV----LGDTNKTGTVVTFRPDPLIF 176
Query: 245 -TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
TT FD+ + R+RELAFLN L I L+ E S + +++ + GG++ +V++LN
Sbjct: 177 ETTEFSFDY--LTSRLRELAFLNSGLRIILKDERS----GRVHDFKYEGGIKSFVEYLNQ 230
Query: 304 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+KKPL + V +G+ ++ALQ+ ++ Y + + +AN+I T +GGTH+ G K+ LT
Sbjct: 231 NKKPLFPNPIYISSVKEGMEFEVALQY-NEGYQENIFSFANNINTTEGGTHLSGFKSGLT 289
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K + +K++ +S SGE +REGLT +IS+++ NP+FEGQTKT+L N EV +V+
Sbjct: 290 RAVNTYIKNADLLKNEKVSPSGEDIREGLTAVISLKIANPQFEGQTKTKLQNSEVEGIVN 349
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+V E L EY E HP +I KS+ A ++ AA++AR+L R+K+VL S SLPGKLADC
Sbjct: 350 SAVYEKLMEYFEEHPAEAKNITMKSILAARSREAARKARELTRRKTVLESGSLPGKLADC 409
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ + PE++E+F+VEGDSAGGSAKQGRDR FQAILPL GK+LN E+ + N++IQ +
Sbjct: 410 TLSDPEKTELFLVEGDSAGGSAKQGRDRSFQAILPLWGKMLNTEKARVDKVLNNDKIQPI 469
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G+ G++F LRYHKIII+ DADVDG+HI TLL+TFFYRY + + +EG +Y+
Sbjct: 470 ILALGAGI-GQEFDISKLRYHKIIIMADADVDGSHIATLLMTFFYRYMRPVIEEGKLYIA 528
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
+PPL++V +GKQ Y Y++ E K F + +QR+KGLGEM QLWETTL+P+
Sbjct: 529 MPPLFQVRKGKQKVYVYNEEERDKAIREFGEKGVL-VQRYKGLGEMNAEQLWETTLDPKN 587
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R + + ++DA EA+ +F+ LMG V+ R+E IQ NA + NLD
Sbjct: 588 RKMIAIKMDDAIEADRMFTILMGDEVEPRREFIQENARYVKNLD 631
>gi|424835717|ref|ZP_18260376.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
gi|365977587|gb|EHN13685.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
Length = 637
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 331/643 (51%), Positives = 448/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE V V RDG + QKY RG P T L V ++ GT+I F PD ++F
Sbjct: 125 VVNALSEHCNVEVRRDGHIWLQKYERGIPKTGLDI----VGDTEKHGTKIYFKPDVEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDIDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F E +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFNLEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + + +IQR+KGLGEM P QLWETT+NPE R
Sbjct: 534 PLYRIYKAKKELYVYSDKELDEALLELGGKDTNTNIQRYKGLGEMDPEQLWETTMNPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLD 705
L Q+ IEDA A+ +F+ LMG +V+ R++ I+N A+ +VNLD
Sbjct: 594 TLLQVTIEDAMAADEIFTILMGTKVEPRRDFIENNADKVVNLD 636
>gi|304439074|ref|ZP_07398993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372433|gb|EFM26020.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 637
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/644 (49%), Positives = 437/644 (67%), Gaps = 23/644 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ IQVL GLE VR RP MYIGSTGP+GLHHL+YE++DN++DEA G IEV
Sbjct: 4 NRHYGAGDIQVLTGLEPVRLRPGMYIGSTGPKGLHHLIYEVVDNSIDEALQGMCDTIEVT 63
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+L D S IP++ HP T KS +ETVLT+LHAGGKF Y VSGGLHGVG+
Sbjct: 64 ILKDGSVSVSDNGSGIPVEKHPQTGKSTVETVLTILHAGGKF--KEGAYKVSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L V R+ Y Q++SRG P T L V+ +D GT I F PD ++F
Sbjct: 122 SVVNALSTKLVAEVKRNKKLYRQEFSRGVPQTEL--EVVEDLKEDVTGTTIIFHPDPEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T ++F+ + R RE+AFLN + I E D ++ + + GG++ +V+++N
Sbjct: 180 ET-VEFEFEVLEKRFREMAFLNKNVKIIFTDERVDRQEI----FHYEGGIKSFVEYINRK 234
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K +H DV+ F + + +++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +AS+TR
Sbjct: 235 KTKIHKDVIYFEELAENTQVEVAIQY-TDSYSENVLTFANNINTEEGGTHLSGFRASVTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N G+K +K+K+ +LSG+ VREG+T IISV++PNP+FEGQTK++LGN E R +VD
Sbjct: 294 TINDYGRKYNIIKEKEENLSGDDVREGMTAIISVKIPNPQFEGQTKSKLGNSETRGIVDG 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V LT YLE +P V IL K+L A +A AA++ARDL R++S+L S +LPGKL DC
Sbjct: 354 VVSNGLTAYLEENPKVAKIILDKALQARRAREAARKARDLTRKRSILDSMTLPGKLKDCH 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ +EIF+VEGDSAGG+AK GRD QA+LPLRGKI+NVE+ + ++EI+ +I
Sbjct: 414 ESDISVNEIFLVEGDSAGGTAKDGRDSNIQAVLPLRGKIMNVEKARLDKILNSDEIKAMI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ E F LRY KIII+TDADVDGAHI TLLLTFF+R+ K L + G IYV
Sbjct: 474 TAFGTGIDKE-FDINNLRYGKIIIMTDADVDGAHIMTLLLTFFFRHMKPLIEHGHIYVAK 532
Query: 604 PPLYKVERGKQV-QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY V+RG++V +YCYDD EL+ + + Y I R+KGLGEM QLWETT+NP+
Sbjct: 533 PPLYGVKRGEKVIRYCYDDEELESALNELGRDKNYKIARYKGLGEMNAEQLWETTMNPDS 592
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ IED +A+ VFS+LMG V+ R+E I +NA N+D
Sbjct: 593 RILLRVNIEDVLDADDVFSTLMGVDVEPRREFIEENAKYAENID 636
>gi|326799865|ref|YP_004317684.1| DNA gyrase B subunit [Sphingobacterium sp. 21]
gi|326550629|gb|ADZ79014.1| DNA gyrase, B subunit [Sphingobacterium sp. 21]
Length = 652
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/657 (48%), Positives = 451/657 (68%), Gaps = 28/657 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+EN Y ++ IQVLEGLEAVRKRP+MYIG G +GLHHLVYE++DN++DEA AGY +
Sbjct: 3 EENKNKSNYSADNIQVLEGLEAVRKRPSMYIGDVGVKGLHHLVYEVVDNSIDEALAGYCT 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I V + DNSI P ++ NKSALE V+T+LHAGGKF + Y VSGGL
Sbjct: 63 DIHVIIHKDNSITVEDNGRGIPTGINKKENKSALEMVMTMLHAGGKFDKDT--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS L V R+G + Q+Y++GKP+ + + DR GT + F P
Sbjct: 121 HGVGVSCVNALSTLLIAEVHREGKIFKQEYAQGKPLYDVKV----IGETDRTGTNVTFHP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D +FT + ++T+AGR+RELA+LN +LT+ +E+ + ++ E++ GGL E+
Sbjct: 177 DPSIFTMTTTYSYDTLAGRLRELAYLNKGIRLTLLDEREEQEDGALRHEEFYSEGGLSEF 236
Query: 298 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++L+ +++PL D + GI ++LALQ+ +D YS+ + Y N+I TI+GGTH+ G
Sbjct: 237 VKFLDGNRQPLIPDPIHVEGIKQGIPVELALQY-NDTYSENVHSYVNNINTIEGGTHVAG 295
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ LTRTL + KS +K+ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 296 FRRGLTRTLKAYADKSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNE 355
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V VD +V E L YLE +P +I+ K + A +A AA++ARD+V++K+V+ S LP
Sbjct: 356 VMGAVDVAVGEILGTYLEENPREAKAIVQKVIIAAQARAAARKARDMVQRKTVMGGSGLP 415
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADC++ P + EI++VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ E +Y+N
Sbjct: 416 GKLADCANNDPAKCEIYLVEGDSAGGTAKQGRNREFQAILPLRGKILNVEKAMEHKIYEN 475
Query: 537 EEIQNLIRALGLGVKG-EDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
EEI+N+ ALG+ + ED K E LRYH+III+TDADVDG+HI TL+LTF++RY K
Sbjct: 476 EEIKNMFTALGVSIGTPEDAKALNLEKLRYHRIIIMTDADVDGSHITTLILTFYFRYMKE 535
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDD----AELKKVKSSFPSNALYSIQRFKGLGEM 648
L + G +Y+ PPLY V++GK+ +Y +++ A ++++K + ++++ +QR+KGLGEM
Sbjct: 536 LIERGYVYIATPPLYLVKKGKEHEYAWNENQRLAAIQRLKGAGKEDSVH-VQRYKGLGEM 594
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW+TT+NPE R L+Q+ IE+AAE + VFS LMG V R+E I+ A +D
Sbjct: 595 NAEQLWDTTMNPETRTLRQVSIENAAECDRVFSMLMGDEVAPRREFIERNAKYAKID 651
>gi|419841535|ref|ZP_14364903.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386904754|gb|EIJ69539.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 638
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/642 (48%), Positives = 430/642 (66%), Gaps = 19/642 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I VLEGLEAVRKRP MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L
Sbjct: 3 NYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNRITVSIL 62
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 PDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE EV V R+G Y+QKY RGKP+ + + +++ + GT + F PD ++F T
Sbjct: 121 VNALSEWTEVKVKREGNVYYQKYLRGKPIEDVKI-ISALEAGETTGTIVTFKPDIEIFET 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I F++ + R++ELA+LN L I L D E + + F GG+ ++++ + + +
Sbjct: 180 VI-FEYEVLQHRLKELAYLNRGLEINLL--DCRNEIGKKESFQFEGGISDFLKEVTQENQ 236
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L + + + +D+A + + S+ + + N+I T +GG+H+ G + LT+ +
Sbjct: 237 TLLSKQIHIEGQAEQVGVDIAFTYTT-GQSEIIYSFVNNINTTEGGSHVTGFRTCLTKVI 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +K+KD L G +REG+ IISV+VP P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NDIGKNQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNTVL 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P+ I+ K L++ KA AA+RAR+ V +KSVL SLPGKLADCSS
Sbjct: 356 STDLKIFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
PEE EIF+VEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ +++EI+ ++ A
Sbjct: 416 KPEECEIFLVEGDSAGGSAKQGRDRYFQAILPLKGKILNVEKAGLHKALESDEIRAMVTA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + E F E LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PP
Sbjct: 476 FGTNIGEESFDLEKLRYGKIILMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPP 535
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GK ++Y Y D++LK++ N Y++QR+KGLGEM P QLWETT++PE R+
Sbjct: 536 LYKVSFGKSIRYAYTDSQLKEMLQGMEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARL 595
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E IQ A V N+D
Sbjct: 596 LLKVSIDNAREADMLFDKLMGDKVEPRREFIQEHAEYVKNID 637
>gi|30018283|ref|NP_829914.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579]
gi|228955743|ref|ZP_04117738.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|365162547|ref|ZP_09358675.1| DNA gyrase subunit B [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410764|ref|ZP_17387884.1| DNA gyrase subunit B [Bacillus cereus BAG3O-2]
gi|423427579|ref|ZP_17404610.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-2]
gi|423433451|ref|ZP_17410455.1| DNA gyrase subunit B [Bacillus cereus BAG4O-1]
gi|423438891|ref|ZP_17415872.1| DNA gyrase subunit B [Bacillus cereus BAG4X12-1]
gi|423506618|ref|ZP_17483207.1| DNA gyrase subunit B [Bacillus cereus HD73]
gi|423589310|ref|ZP_17565396.1| DNA gyrase subunit B [Bacillus cereus VD045]
gi|423632808|ref|ZP_17608553.1| DNA gyrase subunit B [Bacillus cereus VD154]
gi|423644650|ref|ZP_17620267.1| DNA gyrase subunit B [Bacillus cereus VD166]
gi|423651331|ref|ZP_17626901.1| DNA gyrase subunit B [Bacillus cereus VD169]
gi|423658405|ref|ZP_17633704.1| DNA gyrase subunit B [Bacillus cereus VD200]
gi|449086675|ref|YP_007419116.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|29893823|gb|AAP07115.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579]
gi|228803971|gb|EEM50595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363618080|gb|EHL69436.1| DNA gyrase subunit B [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108918|gb|EJQ16848.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-2]
gi|401109496|gb|EJQ17419.1| DNA gyrase subunit B [Bacillus cereus BAG3O-2]
gi|401111869|gb|EJQ19751.1| DNA gyrase subunit B [Bacillus cereus BAG4O-1]
gi|401116018|gb|EJQ23864.1| DNA gyrase subunit B [Bacillus cereus BAG4X12-1]
gi|401224549|gb|EJR31103.1| DNA gyrase subunit B [Bacillus cereus VD045]
gi|401259454|gb|EJR65630.1| DNA gyrase subunit B [Bacillus cereus VD154]
gi|401270282|gb|EJR76305.1| DNA gyrase subunit B [Bacillus cereus VD166]
gi|401279383|gb|EJR85312.1| DNA gyrase subunit B [Bacillus cereus VD169]
gi|401288135|gb|EJR93897.1| DNA gyrase subunit B [Bacillus cereus VD200]
gi|402447283|gb|EJV79139.1| DNA gyrase subunit B [Bacillus cereus HD73]
gi|449020432|gb|AGE75595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 642
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/657 (50%), Positives = 442/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +D +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|302388606|ref|YP_003824427.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
gi|302199234|gb|ADL06804.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
Length = 637
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/644 (50%), Positives = 444/644 (68%), Gaps = 27/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y +I+VLEGLE VR RP MYIGST RGLHHLVYE++DN++DEA AG+ NI V +
Sbjct: 6 VYDETKIEVLEGLEHVRLRPGMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCKNILVTIN 65
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D SI P+ +HP K ALE LT+LHAGGKFG + GY VSGGLHGVG+SV
Sbjct: 66 KDGSITVDDDGRGIPVKIHPKVGKPALEVALTMLHAGGKFG--TGGYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ LEV V RDG +Y Q+Y RGKPVT V + GT+I F PD Q+F
Sbjct: 124 VNALSKWLEVEVKRDGFKYFQRYERGKPVT----EVKKIGEASDTGTKITFMPDDQIFED 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
F+++ +A R+RE AFLN L I ++ D + + + GG+ +V++LN +K
Sbjct: 180 T-SFNYDILAQRLREQAFLNRGLKIEIK----DLRTGKEQVFHYEGGIVSFVKYLNRNKD 234
Query: 307 PLH-DVVGFRK-DVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
LH D + R +G +++ALQ+ +D+Y++ +L +AN+I T +GGTH+ G K++LTR
Sbjct: 235 VLHEDPIYMRAASQEGEWEVEVALQY-NDSYAENVLSFANNINTQEGGTHLVGFKSALTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
++N +K +K++D +LSG+ VREGLT +ISV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 294 SINDYARKMNLLKEQDPNLSGDDVREGLTAVISVKLVNPQFEGQTKTKLGNSEMRGIVES 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V + + +LE +P V I+ K++SA +A AA++AR+LVR+K+ L +SLPGKLADC
Sbjct: 354 VVGDAMNRFLEENPSVARVIVEKAISAARAREAARKARELVRRKNALDRTSLPGKLADCR 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P E+++VEGDSAGGSAKQGRD RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 414 EKDPRLCELYLVEGDSAGGSAKQGRDPRFQAILPLRGKILNVEKARLDKILGNEEIRAMI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G+DF E LRYHKII++ DADVDGAHIRTLLLTF YRY + L + G +Y+
Sbjct: 474 TALGTGI-GDDFDIEKLRYHKIILMADADVDGAHIRTLLLTFLYRYMRPLIEAGMVYIAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS-IQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V +GK+V Y Y D ELK + + + ++RFKGLGEM QLW+TT+NP+
Sbjct: 533 PPLYQVSKGKEVYYAYSDEELKAILERLGKDRDKAEVKRFKGLGEMNADQLWDTTMNPKT 592
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R + ++ +EDA EA+ +F+ LMG +V+ R++ I ++AA + NLD
Sbjct: 593 RTILKVNLEDAIEADEIFTILMGEKVEPRRQFIFEHAAEVRNLD 636
>gi|332685539|ref|YP_004455313.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|379726623|ref|YP_005318808.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
gi|332369548|dbj|BAK20504.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|376317526|dbj|BAL61313.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
Length = 650
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/650 (49%), Positives = 435/650 (66%), Gaps = 31/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I V
Sbjct: 13 AEEYNASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIRVT 72
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 73 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 130
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LE V+R+G Y+Q+Y RG V L + DR GT I F PD ++F
Sbjct: 131 SVVNALSTKLEARVYRNGKIYYQEYHRGNVVADLKV----IGDTDRHGTAIHFIPDPEIF 186
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I+F+ +A R+RELAFLN L I++ ED + +Y++ GG++ YV LN +
Sbjct: 187 KETIEFNFEKLATRVRELAFLNRGLKISI--EDLRGPETVLRDYYYEGGIKSYVGHLNAN 244
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K L D V G +++ IT+++++Q+ +D Y +L +AN+I T +GGTH G K +
Sbjct: 245 KDVLFDEPIYVEGEQQE---ITVEVSMQY-TDGYHSNLLSFANNIHTYEGGTHEAGFKTA 300
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N KK K +K+ D +L+GE VREGLTC+IS++ P P+FEGQTKT+LGN EVR V
Sbjct: 301 LTRVINDYAKKQKLMKENDENLTGEDVREGLTCVISIKHPEPQFEGQTKTKLGNSEVRTV 360
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D+ E+ ++L +P + I+ K L A KA LAAKRAR++ R+K L S+LPGKLA
Sbjct: 361 TDRLFSEHFGKFLMENPTIGKKIVDKGLLASKARLAAKRAREVTRRKGNLEISNLPGKLA 420
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS E+ E+FIVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+
Sbjct: 421 DCSSREAEKCELFIVEGDSAGGSAKQGRDRMFQAILPIRGKILNVEKASMDKILANEEIR 480
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+L A+G G GEDF RYHK+II+TDADVDGAHIRTLLLT FYR+ + + + G +Y
Sbjct: 481 SLFTAMGTGF-GEDFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVY 539
Query: 601 VGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
+ PPLY V++GK + Y + EL + + P + S+QR+KGLGEM QLWET
Sbjct: 540 IAQPPLYGVKQGKNITYVQPGKQAEEELSHLMETLPKSPKASVQRYKGLGEMDDHQLWET 599
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
T++PE+R++ ++ ++DA A+ +F LMG +V+ R+ I+ A+ V NLD
Sbjct: 600 TMDPERRLMSRVSVDDAVAADQIFEMLMGDKVEPRRAFIEENAHYVKNLD 649
>gi|225181142|ref|ZP_03734588.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
gi|225168111|gb|EEG76916.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
Length = 650
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/652 (49%), Positives = 445/652 (68%), Gaps = 27/652 (4%)
Query: 71 NPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
NP++ Y IQVLEGLEAVR+RP MYIGSTG RGLHHLV+E++DN++DEA AG+ +
Sbjct: 8 NPLNNGHYDESHIQVLEGLEAVRRRPGMYIGSTGARGLHHLVFEVVDNSIDEALAGHCDD 67
Query: 130 IEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I + + DN IP+ + P T + A+E VLTVLHAGGKFGG GY VSGGLH
Sbjct: 68 IVITIEKDNIITVSDDGRGIPVGIQPQTGRPAVEVVLTVLHAGGKFGGE--GYKVSGGLH 125
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALSE LEV V RDG + ++RG V LT + GT+IRF PD
Sbjct: 126 GVGVSVVNALSEWLEVEVHRDGKIHQMSFARGAIVKELTV----TGKTKKTGTQIRFKPD 181
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYF-FAGGLEE 296
+VF T ++F + T++ R+RELAFLN + I + R E +D + E F + GG++
Sbjct: 182 AEVFET-VEFSYETLSKRLRELAFLNKGIRITVADERTELTDETNEKVKETFKYDGGIKS 240
Query: 297 YVQWLNTDKKPLHDVVGF--RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
+V++LN +K+PLH + ++ D +++ALQ+ D Y+D +L +AN+I T +GGTH
Sbjct: 241 FVEFLNKNKEPLHKKAIYLEQEKEDCCQVEIALQY-HDGYNDLILSFANNIHTHEGGTHE 299
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K++LTR +N +K+ +K+ + ++SGE +REGLT +ISV++ P+FEGQTKT+LGN
Sbjct: 300 AGFKSALTRLINDYARKNNLLKENESNVSGEDIREGLTAVISVKLLEPQFEGQTKTKLGN 359
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
E+R +VD + E L YL +P + ++ KS+SA +A AA++AR+L R+KS L +S
Sbjct: 360 SEMRGIVDSFLYEELGAYLGENPQMAKRLVEKSVSAARAREAARKARELARRKSALEVTS 419
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADC+S P E+++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE+ +
Sbjct: 420 LPGKLADCASRDPAMCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARLDKIL 479
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI+ +I ALG G+ DF RYHKIII+TDADVDG+HIRTLLLTFFYRY + L
Sbjct: 480 ANEEIRTIITALGTGIS-TDFDLAKARYHKIIIMTDADVDGSHIRTLLLTFFYRYMQPLI 538
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
G +Y+ PPLY V++ ++ Y Y + +L ++ S+QR+KGLGEM P QLW
Sbjct: 539 QAGYVYIAQPPLYLVKKKQKEHYVYTEDQLDRLLKEIGREG-NSLQRYKGLGEMNPEQLW 597
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
TT++PE+R + Q+ +EDA A+ +F+ LMG +V+ R+ I++ AN V NLD
Sbjct: 598 STTMDPEKRTILQVTMEDAIRADDMFTVLMGDKVEPRRVFIESHANQVRNLD 649
>gi|340755275|ref|ZP_08691970.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|421500122|ref|ZP_15947137.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313685793|gb|EFS22628.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|402268886|gb|EJU18245.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 638
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/642 (48%), Positives = 430/642 (66%), Gaps = 19/642 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I VLEGLEAVRKRP MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L
Sbjct: 3 NYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNRITVSIL 62
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 PDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE EV V R+G Y+QKY RGKP+ + + +++ + GT + F PD ++F T
Sbjct: 121 VNALSEWTEVKVKREGNVYYQKYLRGKPIEDVKI-ISALEAGETTGTIVTFKPDIEIFET 179
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I F++ + R++ELA+LN L I L D E + + F GG+ ++++ + + +
Sbjct: 180 VI-FEYEVLQHRLKELAYLNRGLEINLL--DCRNEIGKKESFQFEGGISDFLKEVTQENQ 236
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L + + + +D+A + + S+ + + N+I T +GG+H+ G + LT+ +
Sbjct: 237 TLLSKQIHIEGQAEQVGVDIAFTYTT-GQSEIIYSFVNNINTTEGGSHVTGFRTCLTKVI 295
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +K+KD L G +REG+ IISV+VP P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NDIGKSQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNTVL 355
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P+ I+ K L++ KA AA+RAR+ V +KSVL SLPGKLADCSS
Sbjct: 356 STDLKIFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSK 415
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
PEE EIF+VEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ +++EI+ ++ A
Sbjct: 416 KPEECEIFLVEGDSAGGSAKQGRDRYFQAILPLKGKILNVEKAGLHKALESDEIRAMVTA 475
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + E F E LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PP
Sbjct: 476 FGTNIGEESFDLEKLRYGKIILMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPP 535
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GK ++Y Y D++LK++ N Y++QR+KGLGEM P QLWETT++PE R+
Sbjct: 536 LYKVSFGKSIRYAYTDSQLKEMLQGMEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARL 595
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E IQ A V N+D
Sbjct: 596 LLKVSIDNAREADMLFDKLMGDKVEPRREFIQEHAEYVKNID 637
>gi|225619544|ref|YP_002720801.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
gi|10644698|gb|AAG21374.1|AF288224_1 DNA Gyrase B subunit [Brachyspira hyodysenteriae]
gi|225214363|gb|ACN83097.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
Length = 636
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/643 (48%), Positives = 424/643 (65%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
N IP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 KKGNIIQVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V +DG Y Q Y RG P V V + + GT + F D ++F
Sbjct: 123 VVNALSTELIAEVNKDGKLYRQVYHRGIPEEP----VKEVGTSKKTGTTVTFKADDEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T + +D+ +A R+RELAFLN + I L+ D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTV-YDYKILANRLRELAFLNRGIRITLK--DEREAEVVSNEFYYEGGIEMFITHLNENK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K LHD + K+ D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KALHDKPIYLHKNEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
++ E+++VEGDSAGG+AK GRDR FQAILPLRGK+LNVE+ + NE ++ +I
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIA 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G F +RY ++II+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VP
Sbjct: 475 ALGCGV-GASFDISKIRYGRVIIMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVP 533
Query: 605 PLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYK+ K+ Y Y D + K+ + + Y IQR+KGLGEM QLWETT+NPE R
Sbjct: 534 PLYKISFDKKNFLYAYSDEQRDKILAE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ Q++ EDA +A+ +FS LMG V R++ I++ A V NLD
Sbjct: 593 LMYQVLTEDAEKADQLFSMLMGDEVKPRRDFIESNARYVKNLD 635
>gi|334135652|ref|ZP_08509135.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
gi|333606847|gb|EGL18178.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
Length = 638
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/644 (50%), Positives = 434/644 (67%), Gaps = 27/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGYCTRIDVIVH 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+ H + ALE VLTVLHAGGKFGG SGY VSGGLHGVG+SV
Sbjct: 67 KDNRITVIDNGRGIPVGEHAKMKRPALEVVLTVLHAGGKFGGDDSGYKVSGGLHGVGISV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L V V G + Q+Y +GKP L + + GT + F PD ++FT
Sbjct: 127 VNALSSHLLVRVKLHGKIHEQEYRQGKPQYDLRI----IGETEETGTTVTFTPDPEIFTE 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++++ + RIRELAFLN + I L E +D ++ + + GG++ +V+ LN +K+
Sbjct: 183 TTEYEYEILQSRIRELAFLNKGIEINLIDERTDTSES----FMYEGGIKSFVEHLNRNKE 238
Query: 307 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
LH V G +++ I +++A+Q+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 239 ALHQPPIYVEGSKEN---IQVEVAIQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 294
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN +K+ +K+ +LSG+ VREGL IISV++P P+FEGQTKT+LGN EVR +VD
Sbjct: 295 RILNDYARKTNAIKESGSNLSGDDVREGLAAIISVKIPEPQFEGQTKTKLGNSEVRGIVD 354
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E L E+L+ +P + I+ K L A +A AA++AR+L R+KSVL SSLPGKLADC
Sbjct: 355 SLFAEKLLEFLDENPAIAKKIVEKGLQASRAREAARKARELTRRKSVLEVSSLPGKLADC 414
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + N EI+ +
Sbjct: 415 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDKILSNLEIRAI 474
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ +DF RYHK+II+TDADVDGAHIRTLLLT+FYRY + L + G +Y+
Sbjct: 475 ITAMGTGIS-DDFDITKARYHKLIIMTDADVDGAHIRTLLLTYFYRYMRKLIEVGYVYIA 533
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ERGK +Y Y D + ++ F A ++QR+KGLGEM QLW+TT++PE
Sbjct: 534 QPPLYKLERGKVARYAYSDKQRDEIMKEFGEGAKVNVQRYKGLGEMDAEQLWDTTMDPET 593
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L Q+ I+DA +A+ +F +LMG V+ R+ I A V NLD
Sbjct: 594 RTLLQVTIQDAMDADSIFDTLMGDNVEPRRNFIHQHAKYVKNLD 637
>gi|16799085|ref|NP_469353.1| DNA gyrase subunit B [Listeria innocua Clip11262]
gi|423101125|ref|ZP_17088829.1| DNA gyrase, B subunit [Listeria innocua ATCC 33091]
gi|16412427|emb|CAC95239.1| DNA gyrase subunit B [Listeria innocua Clip11262]
gi|370792240|gb|EHN60117.1| DNA gyrase, B subunit [Listeria innocua ATCC 33091]
Length = 646
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 432/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SLEV V R+G +Y+Q++ RG V + D +GT + F PD Q+FT
Sbjct: 134 NALSTSLEVYVHREGQKYYQRFERGDVVMDMEVQ----GETDYRGTIVHFTPDPQIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQ++Y Y D +L+ +S + YSIQR+KGLGEM P QLW+TT+NPE R L
Sbjct: 546 YQIKHGKQIEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ I+DA +A+ F LMG RV+ R++ I++ A V NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLD 645
>gi|294508443|ref|YP_003572501.1| DNA gyrase subunit B [Salinibacter ruber M8]
gi|294344771|emb|CBH25549.1| DNA gyrase subunit B [Salinibacter ruber M8]
Length = 698
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/642 (48%), Positives = 431/642 (67%), Gaps = 18/642 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIG G RGLHHLVYE+LDN++DEA AG+ I V +
Sbjct: 61 YAASNIQVLEGLEAVRKRPSMYIGDVGLRGLHHLVYEVLDNSIDEAMAGHCDEIGVEIYE 120
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D HPA ++SALE V+TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 121 DGSVSIEDNGRGIPVDQHPAEDRSALEVVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVV 178
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NAL+ EVTVWRDG + Q Y G P + V P+++ + GTRIRFWPD +F T
Sbjct: 179 NALASRFEVTVWRDGSVWEQNYLCGVPEDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT 237
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F T++ R+RELAFLN + I + + E Y G+ +V +L+ +
Sbjct: 238 -EFRFETLSDRLRELAFLNAGVRIRVEDHREEDEGLARETYHSEEGIIGFVDYLDEARDS 296
Query: 308 LHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+ D + + DG + ++LA+Q+ +D Y+ +L + N+I T +GGTH+ G + +LTRTL
Sbjct: 297 ILDETIYIAETDGEVPVELAMQY-NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTRTLK 355
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K+ + D LSG+ REGLT ++SV+V P+FEGQTKT+LGN +V+ +V+ +
Sbjct: 356 RYAQKNDMLSDLKFDLSGDDFREGLTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVESLIN 415
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
L +LE HPD + I+ K + A +A AA++AR+LV++K SLPGKLADCSS
Sbjct: 416 TELGRWLEDHPDQAERIIEKVIQAAEARAAARKARELVQRKDAFSGGSLPGKLADCSSRD 475
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEE E+++VEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ + ++++IQN++ AL
Sbjct: 476 PEEGELYLVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARLDRILEHDQIQNIVTAL 535
Query: 547 GLGVKG--EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
G G+ E+F +RYHKI+++TDADVDGAHIR+LLLTFFYR + L ++G IY+ +P
Sbjct: 536 GTGLTSTEEEFNMNEMRYHKIVMMTDADVDGAHIRSLLLTFFYRQLRPLIEKGNIYIALP 595
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+++ G Q YC+ D E++ + ++ S+QR+KGLGEM P QLW TT+NPE R
Sbjct: 596 PLYRIQNGSQEIYCWSDEEMQTRMAELRADGNSPSMQRYKGLGEMNPEQLWTTTMNPETR 655
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
++Q+ I+DAA A+ +FS+LMG V+ R+E I+ A +D
Sbjct: 656 KIQQVTIQDAAAADRLFSTLMGDSVEPRREFIERNAKYATID 697
>gi|182416761|ref|ZP_02948158.1| DNA gyrase, B subunit [Clostridium butyricum 5521]
gi|237669641|ref|ZP_04529619.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379418|gb|EDT76913.1| DNA gyrase, B subunit [Clostridium butyricum 5521]
gi|237654875|gb|EEP52437.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 637
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/644 (50%), Positives = 446/644 (69%), Gaps = 24/644 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY IEV
Sbjct: 5 NRKYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKKIEVN 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP KS +E ++T+LHAGGKFGG S LHGVG
Sbjct: 65 INKDNSITVIDDGRGMPVGIHPKMGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE VTV R+G + Q+YS+GK +T V + GT++ F PD ++F
Sbjct: 123 SVVNALSEECRVTVKREGAIWQQEYSKGKVLTD----VEKIGESSESGTQVYFKPDAEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I FD +A R+RELAFLN + I L + EK + + + GG++ +V +LN +
Sbjct: 179 DEVI-FDFEILAQRLRELAFLNKGIYIKLVDLREENEKEEV--FHYEGGIKSFVSYLNRN 235
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH+ + + + D +++++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR
Sbjct: 236 KVALHEEPIYIEGIKDNVSVEVALQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N KK +K+ D + +G+ +REGLT ++SV++ P+FEGQTKT+LGN EVR +VD
Sbjct: 295 AFNDYAKKFGHIKENDKNFTGDDIREGLTAVVSVKIEEPQFEGQTKTKLGNSEVRGIVDS 354
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E ++ +LE +P V I+ K+L A +A AA++AR+L R KSVL S+LPGKLADCS
Sbjct: 355 IVGECISTFLEENPSVGKMIVDKALMAARARDAARKARELTR-KSVLERSTLPGKLADCS 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+E EI+IVEGDSAGGSAKQGR+R+FQAILPLRGKILNVE++ + + I++++
Sbjct: 414 SKDPKECEIYIVEGDSAGGSAKQGRNRKFQAILPLRGKILNVEKQRLDRILNADTIRSMV 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF E +RY +III+TDADVDGAHIRTLLLTFFYRY + L DEG +Y+
Sbjct: 474 TAFGAGI-GNDFDIEKIRYDRIIIMTDADVDGAHIRTLLLTFFYRYMRPLIDEGHVYIAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+ +GK+ Y Y DAEL++V F + IQR+KGLGEM QLW+TT++PEQ
Sbjct: 533 PPLYKISKGKKEHYAYSDAELEQVLIDFGGKDNSTDIQRYKGLGEMNASQLWDTTMDPEQ 592
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ +EDA +A+ +F+ LMG +V+ RKE I QNA N+VNLD
Sbjct: 593 RILLRVNVEDAMQADEIFTILMGEKVEPRKEFIQQNAKNVVNLD 636
>gi|145577969|gb|ABP82703.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/641 (50%), Positives = 434/641 (67%), Gaps = 22/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG P L + D GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPAADLKV----IGETDHTGTITRFKPDPEIFKE 176
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++D +T+A R+RELAFLN + + + + E Q E+ + GG++ YV+ LN K
Sbjct: 177 TTEYDFDTLATRMRELAFLNRNIKLII---EDKRENKQKKEFHYEGGIKSYVEHLNRSKA 233
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +
Sbjct: 234 PIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVI 292
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 293 NDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVF 352
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 353 SEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSK 412
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A
Sbjct: 413 DPSISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITA 472
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PP
Sbjct: 473 IGTNIGG-DFDIEKARYHKVIIITDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPP 531
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
L+KV++GK++QY Y+D EL+K+ + P++ IQR+KGLGEM P QLWETT++PE R L
Sbjct: 532 LFKVQQGKKIQYAYNDKELEKILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSL 591
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 592 LQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|332685540|ref|YP_004455314.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|332369549|dbj|BAK20505.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
Length = 643
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/650 (49%), Positives = 435/650 (66%), Gaps = 31/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I V
Sbjct: 6 AEEYNASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIRVT 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 66 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LE V+R+G Y+Q+Y RG V L + DR GT I F PD ++F
Sbjct: 124 SVVNALSTKLEARVYRNGKIYYQEYHRGNVVADLKV----IGDTDRHGTAIHFIPDPEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I+F+ +A R+RELAFLN L I++ ED + +Y++ GG++ YV LN +
Sbjct: 180 KETIEFNFEKLATRVRELAFLNRGLKISI--EDLRGPETVLRDYYYEGGIKSYVGHLNAN 237
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K L D V G +++ IT+++++Q+ +D Y +L +AN+I T +GGTH G K +
Sbjct: 238 KDVLFDEPIYVEGEQQE---ITVEVSMQY-TDGYHSNLLSFANNIHTYEGGTHEAGFKTA 293
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N KK K +K+ D +L+GE VREGLTC+IS++ P P+FEGQTKT+LGN EVR V
Sbjct: 294 LTRVINDYAKKQKLMKENDENLTGEDVREGLTCVISIKHPEPQFEGQTKTKLGNSEVRTV 353
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D+ E+ ++L +P + I+ K L A KA LAAKRAR++ R+K L S+LPGKLA
Sbjct: 354 TDRLFSEHFGKFLMENPTIGKKIVDKGLLASKARLAAKRAREVTRRKGNLEISNLPGKLA 413
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS E+ E+FIVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+
Sbjct: 414 DCSSREAEKCELFIVEGDSAGGSAKQGRDRMFQAILPIRGKILNVEKASMDKILANEEIR 473
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+L A+G G GEDF RYHK+II+TDADVDGAHIRTLLLT FYR+ + + + G +Y
Sbjct: 474 SLFTAMGTGF-GEDFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVY 532
Query: 601 VGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
+ PPLY V++GK + Y + EL + + P + S+QR+KGLGEM QLWET
Sbjct: 533 IAQPPLYGVKQGKNITYVQPGKQAEEELSHLMETLPKSPKASVQRYKGLGEMDDHQLWET 592
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
T++PE+R++ ++ ++DA A+ +F LMG +V+ R+ I+ A+ V NLD
Sbjct: 593 TMDPERRLMSRVSVDDAVAADQIFEMLMGDKVEPRRAFIEENAHYVKNLD 642
>gi|206970026|ref|ZP_03230979.1| DNA gyrase, B subunit [Bacillus cereus AH1134]
gi|218232402|ref|YP_002364860.1| DNA gyrase subunit B [Bacillus cereus B4264]
gi|228961757|ref|ZP_04123360.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229072958|ref|ZP_04206154.1| DNA gyrase subunit B [Bacillus cereus F65185]
gi|229112906|ref|ZP_04242437.1| DNA gyrase subunit B [Bacillus cereus Rock1-15]
gi|229130739|ref|ZP_04259692.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4]
gi|229153652|ref|ZP_04281828.1| DNA gyrase subunit B [Bacillus cereus m1550]
gi|229181739|ref|ZP_04309062.1| DNA gyrase subunit B [Bacillus cereus 172560W]
gi|229193744|ref|ZP_04320685.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876]
gi|296500843|ref|YP_003662543.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171]
gi|51988024|dbj|BAD44713.1| gyraseB [Bacillus cereus ATCC 14579]
gi|206734603|gb|EDZ51772.1| DNA gyrase, B subunit [Bacillus cereus AH1134]
gi|218160359|gb|ACK60351.1| DNA gyrase, B subunit [Bacillus cereus B4264]
gi|228589769|gb|EEK47647.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876]
gi|228601772|gb|EEK59270.1| DNA gyrase subunit B [Bacillus cereus 172560W]
gi|228629838|gb|EEK86491.1| DNA gyrase subunit B [Bacillus cereus m1550]
gi|228652756|gb|EEL08641.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4]
gi|228670585|gb|EEL25898.1| DNA gyrase subunit B [Bacillus cereus Rock1-15]
gi|228710204|gb|EEL62182.1| DNA gyrase subunit B [Bacillus cereus F65185]
gi|228797951|gb|EEM44961.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296321895|gb|ADH04823.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171]
Length = 640
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 129 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|145578015|gb|ABP82726.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar ostriniae]
Length = 632
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GL+HLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLYHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKLGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|423583663|ref|ZP_17559774.1| DNA gyrase subunit B [Bacillus cereus VD014]
gi|423633659|ref|ZP_17609312.1| DNA gyrase subunit B [Bacillus cereus VD156]
gi|401209723|gb|EJR16482.1| DNA gyrase subunit B [Bacillus cereus VD014]
gi|401282726|gb|EJR88624.1| DNA gyrase subunit B [Bacillus cereus VD156]
Length = 642
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/657 (50%), Positives = 442/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----AYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F +D +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDNELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|119355886|ref|YP_910530.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
gi|119353235|gb|ABL64106.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
Length = 643
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/640 (48%), Positives = 426/640 (66%), Gaps = 27/640 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQ+L+G+E VRKRPAMYIG RGLHHL+YEI+DN++DE G+ I V+L
Sbjct: 12 YIASNIQILDGIEHVRKRPAMYIGDIHTRGLHHLIYEIVDNSIDETLGGFNEYIFVSLNP 71
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE V+TV+ AGGKF S Y VSGGLHGVG SVV
Sbjct: 72 DGSVTVIDHGRGIPVDIHPQKQKSALELVMTVIGAGGKFDKGS--YKVSGGLHGVGASVV 129
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE EV V+RDG Y Q++ RG P +V + D++GT+ F PD +F T
Sbjct: 130 NALSEWCEVEVYRDGKAYFQRFERGVP----QGNVREIGLSDQKGTKTTFKPDNLIFKTT 185
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F + I R+RELAFLN L+I ++ D E + + GGL+E+V++ + ++
Sbjct: 186 -EFRKDIIIDRMRELAFLNKNLSITVQDADGAQEI-----FHYEGGLKEFVRFTDINRLS 239
Query: 308 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + + F + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN
Sbjct: 240 LIKEPIYFIGERDTTIVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V
Sbjct: 299 LYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVEEPQFEGQTKTKLGNSETQSIVESIVN 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+E+ E +P+V+ I+ K A + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 359 ELLSEFAESNPNVIKMIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSIND 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I AL
Sbjct: 419 PEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILAL 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G E+F E LRY KIII+TDADVDGAHIRTLLLTFF+RY ++L + G +Y+ PPL
Sbjct: 479 GTSFGEEEFSPEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVYIAQPPL 538
Query: 607 YKVERGKQVQYCYDDAELKKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
Y V+ GK QY +DD E + + A IQR+KGLGEM P QLW TT++P
Sbjct: 539 YLVKSGKDQQYAWDDEERNSITDTLKKMQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAH 598
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
R L Q+ +E+A EA+ +FS+LMG +V+ R+E I+ A V
Sbjct: 599 RSLLQVSVENAREADQIFSTLMGDKVEPRREFIEKNARYV 638
>gi|145578023|gb|ABP82730.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar fukuokaensis]
Length = 632
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 437/642 (68%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVR+RP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRERPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPALPKPGIQRYKGLGEMSPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|118475783|ref|YP_892934.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam]
gi|118415008|gb|ABK83427.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam]
Length = 645
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/657 (49%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 5 SMEQKQMQEN----SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 60
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 61 ALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 120
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 121 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 174
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F ++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 175 TITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 229
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 230 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYE 288
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 289 GGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 348
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 349 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSA 408
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 409 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 468
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 469 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 527
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 528 MRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMN 587
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 588 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 644
>gi|389844097|ref|YP_006346177.1| DNA gyrase subunit B [Mesotoga prima MesG1.Ag.4.2]
gi|387858843|gb|AFK06934.1| DNA gyrase, B subunit [Mesotoga prima MesG1.Ag.4.2]
Length = 631
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/644 (50%), Positives = 418/644 (64%), Gaps = 25/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y ++ I++L+GL+ VRKRP MYIGSTG GLHHLVYEI+DN++DEA G+ I +
Sbjct: 1 MSDLYNAQNIKILKGLDPVRKRPGMYIGSTGKSGLHHLVYEIVDNSIDEAMGGFCDRINI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ D S IPID+HP T SALE V+T LHAGGKF S Y +SGGLHGVG
Sbjct: 61 VITEDGSVIVSDNGRGIPIDIHPDTGTSALEVVMTTLHAGGKF--SKDSYKISGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE + V V DG Y QKY RGK + + V + GT F PD V
Sbjct: 119 ASVVNALSEWMIVEVMVDGKIYRQKYERGKALAPVEV----VGETNETGTVTSFKPDPLV 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT FD + + R +ELA+LN + I D + Y F GG+ E+V+ L
Sbjct: 175 FTVT-DFDFDILEARFKELAYLNGGIKITF----EDRRIGEKRSYHFEGGIVEFVKALTK 229
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+KK +H D + + + I LA+Q+ S +Y + +L + N+I+TI+GGTH+ G K LT
Sbjct: 230 NKKSIHKDPIYLEGTYNDVKIQLAMQYTS-SYDEDILTFVNNIKTIEGGTHLTGFKTVLT 288
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+T+N +G+K +KDKD +L GE +REGL+ I+SV V P+FEGQTK +LGN E + V
Sbjct: 289 KTMNDVGRKHNVLKDKDPNLQGEDLREGLSAILSVFVKEPQFEGQTKAKLGNDEAFEAVM 348
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ V+E L EY + + L +ILSK+L A +A LAAK+AR++VR+K+ L +++LPGKLADC
Sbjct: 349 KVVKEKLEEYFDYNQKDLKAILSKALEASRARLAAKKAREMVRRKNALENTTLPGKLADC 408
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S +E+EIFIVEGDSAGGSAK R R QAILPLRGKILNVE+ M K+E I N+
Sbjct: 409 ISENLDETEIFIVEGDSAGGSAKMARSRETQAILPLRGKILNVEKAGLDRMLKSETISNI 468
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G+ GEDF+ + LRY KIII+TDADVDGAHI TLLLT FYRY L G +YV
Sbjct: 469 IVALGTGM-GEDFEIKNLRYGKIIIMTDADVDGAHITTLLLTLFYRYMTPLITNGKVYVA 527
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PLYK+E +Q Y Y D EL L + RFKGLGEM P QLWETT+NP
Sbjct: 528 QAPLYKIELNRQKHYFYSDEELTTFLKEHSDRKL-NYSRFKGLGEMNPEQLWETTMNPND 586
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L ++ IEDA EA+ VF+ LMG+ V+ R+ IQ +A ++ NLD
Sbjct: 587 RKLVKITIEDAEEADRVFTILMGSEVEERRSFIQRHALSISNLD 630
>gi|190710611|gb|ACE95136.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/635 (51%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKA----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|228924238|ref|ZP_04087509.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228835456|gb|EEM80826.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 640
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 129 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 184
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 185 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 240 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 299 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 419 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 479 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 538 PLFKIQQGKKIQYAYNDNELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 598 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|387789733|ref|YP_006254798.1| DNA gyrase subunit B [Solitalea canadensis DSM 3403]
gi|379652566|gb|AFD05622.1| DNA gyrase, B subunit [Solitalea canadensis DSM 3403]
Length = 653
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/652 (49%), Positives = 443/652 (67%), Gaps = 28/652 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y ++ IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AG+ ++I V
Sbjct: 9 AANYSADNIQVLEGLEAVRKRPAMYIGDVGVKGLHHLVYEVVDNSIDEALAGFCNDIYVT 68
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P +H KSALE V+TVLHAGGKF + Y VSGGLHGVG+
Sbjct: 69 IHKDNSISVKDNGRGIPTGMHTKEKKSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGV 126
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L+ V R+G + Q+Y RGKP V V + GT + F PD ++F
Sbjct: 127 SCVNALSTHLKAEVHREGKVWVQEYERGKP----QYDVKTVGETNITGTIVTFTPDTEIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
T ++++T+A R+RELA+LN +LT+ +E +D N YF GGL+E++ +L+
Sbjct: 183 TLTTIYNYDTLAARLRELAYLNKGIRLTLTDERETNDDGSYVVNSYFSEGGLKEFITYLD 242
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+++PL + + + GI ++LALQ+ S YS+ + Y N+I TI+GGTH+ G + L
Sbjct: 243 GNREPLIPEPIYIDGNKSGIPVELALQYNS-TYSENVHSYVNNINTIEGGTHVAGFRRGL 301
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTL S +KS +K+ + ++G+ REGLT ++SV+V P+FEGQTKT+LGN EV V
Sbjct: 302 TRTLKSYAEKSGLLKNLKVEITGDDFREGLTAVVSVKVAEPQFEGQTKTKLGNNEVIGAV 361
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
DQ+V E L YLE HP I+ K + A A AA++AR++V++KSV+ S LPGKL+D
Sbjct: 362 DQAVGEILGVYLEEHPKEARLIVQKVVLAATARAAARKAREMVQRKSVMSGSGLPGKLSD 421
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ PE E+++VEGDSAGG+AKQGRDR FQAILPL+GKILNVE+ E +Y+NEEI+N
Sbjct: 422 CSNNDPEACELYLVEGDSAGGTAKQGRDRNFQAILPLKGKILNVEKAMEHKIYENEEIKN 481
Query: 542 LIRALGLGVKG-EDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ A+G+ + ED K E LRYHKIII+TDADVDG+HI TL+LTFF+RY K L ++G
Sbjct: 482 IFTAMGVSIGTPEDDKALNLEKLRYHKIIIMTDADVDGSHITTLILTFFFRYMKALVEQG 541
Query: 598 CIYVGVPPLYKVERGKQVQYCYDD----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 653
IY+ PPLY V++GK +Y + + A +++VK + +++ +IQR+KGLGEM QL
Sbjct: 542 YIYIATPPLYLVKKGKDFEYAWTEEQRLAAIERVKGNGKEDSV-NIQRYKGLGEMNAEQL 600
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
WETT+NP+ R L+Q+ IE+AAE + FS LMG V R++ I+ A +D
Sbjct: 601 WETTMNPDTRTLRQVTIENAAECDHTFSVLMGDEVAPRRDFIEKHAKYAKID 652
>gi|423355976|ref|ZP_17333600.1| DNA gyrase subunit B [Bacillus cereus IS075]
gi|423374937|ref|ZP_17352274.1| DNA gyrase subunit B [Bacillus cereus AND1407]
gi|423554056|ref|ZP_17530382.1| DNA gyrase subunit B [Bacillus cereus ISP3191]
gi|423571385|ref|ZP_17547628.1| DNA gyrase subunit B [Bacillus cereus MSX-A12]
gi|401080923|gb|EJP89205.1| DNA gyrase subunit B [Bacillus cereus IS075]
gi|401093153|gb|EJQ01268.1| DNA gyrase subunit B [Bacillus cereus AND1407]
gi|401181489|gb|EJQ88637.1| DNA gyrase subunit B [Bacillus cereus ISP3191]
gi|401201206|gb|EJR08082.1| DNA gyrase subunit B [Bacillus cereus MSX-A12]
Length = 642
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/657 (49%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F ++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|448410257|ref|ZP_21575122.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
gi|445671953|gb|ELZ24532.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
Length = 638
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 317/636 (49%), Positives = 440/636 (69%), Gaps = 22/636 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++QIQ LEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 6 EEYGAQQIQALEGLEAVRKRPAMYIGSTDDRGLHHLVYEVVDNSIDEALAGYCDSISVTI 65
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D H +K A+E V+T+LHAGGKF S Y VSGGLHGVG+S
Sbjct: 66 HDDGSVSVSDDGRGIPVDTHEKYDKPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L+V V RDG Y + + +G P L V +D+ + GT IRFWPD ++F
Sbjct: 124 VVNALSERLDVEVKRDGAVYRESFEQGAPQDGLE-RVRDMDADEGTGTTIRFWPDTEIFE 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
A ++D++T+ R+RELAFLN + I L +D + + + GG+ E+V++LN K
Sbjct: 183 -ADEYDYSTLESRLRELAFLNSGVEITL----TDERDGTADTFRYEGGIREFVEYLNETK 237
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+PLH +VV F + I +++ALQ ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 238 EPLHQEVVYFEDEDQDIHVEVALQ-ATNELQGSIHAFANNINTREGGTHLTGFKTALTRI 296
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +++ + + D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 297 VNDYAEENSLLGEIDGTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESA 356
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L Y E HPD + I+ K++ A KA AAK+A++L R+KS L S++LPGKL+DC +
Sbjct: 357 VHDGLGTYFEEHPDTAEVIVQKAVEAAKARKAAKKAKELTRRKSALDSTALPGKLSDCQT 416
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE++E+FI EGDSAGGSAKQGR+ FQAILP+RGKILNVE+ + +N EI+ +I
Sbjct: 417 RDPEDAELFITEGDSAGGSAKQGRNPEFQAILPIRGKILNVEKHRLDRILENNEIRAMIT 476
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E RY KI+++TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 477 AIGTGI-GDEFDIEEARYEKIVLMTDADVDGAHIRTLLLTFFYRHMRPLLEAGYVYAAQP 535
Query: 605 PLYKVE-RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V RG+ D+ + V+ N +QRFKGLGEM P QLW+TT++P+QR
Sbjct: 536 PLYRVRYRGETYDAMSDEERDRIVEEKCDGNPT-QVQRFKGLGEMNPQQLWDTTMDPQQR 594
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 595 ILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 630
>gi|254168966|ref|ZP_04875805.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|197622072|gb|EDY34648.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 648
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 334/658 (50%), Positives = 442/658 (67%), Gaps = 47/658 (7%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LE +AVRKRP MYIGST RGLHHL+YE++DN++DEA AGY S I V +
Sbjct: 8 YDAKAIQILEDAQAVRKRPGMYIGSTDERGLHHLIYEVVDNSIDEALAGYCSRINVIIHK 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE V+TVLHAG KF Y ++GGLHGVG+ VV
Sbjct: 68 DGSVSVEDDGRGIPVDMHPEKGKSALEVVMTVLHAGAKF--DKKAYRITGGLHGVGIHVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPV------------DSKDRQ---- 231
N LSE L+ + RDG Y Q Y RGKP C V V D D +
Sbjct: 126 NFLSEWLKAYIKRDGKIYFQWYERGKP----QCDVHVVGKIENGNFVWIEDGHDEKFKYS 181
Query: 232 -GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF- 289
GT IRF PD ++F T +F ++ + ++R+LAFLN + IAL E S + E F
Sbjct: 182 RGTYIRFKPDAEIFETT-EFKYSIVKKKLRDLAFLNRGIEIALEDERSGKK-----EIFK 235
Query: 290 FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 348
+ GG+ E+V++LN P+H DVV + + DGI ++ A+Q+ +D+ S+ +L + N+I T+
Sbjct: 236 YDGGIVEFVKFLNEGYNPIHRDVVYGKDEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTV 294
Query: 349 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 408
+GGTH+ G +++LT+ +N K +K D SL GE VREGLT +I V+ PNP+FEGQT
Sbjct: 295 EGGTHVSGFRSALTKVINDFAKSRNLLKGID-SLQGEDVREGLTAVIHVKHPNPQFEGQT 353
Query: 409 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 468
K +LGN EV+ VV V + L+ Y E HPDV +I+SK+++A +A +AA++AR+L R+K
Sbjct: 354 KAKLGNSEVKGVVFSIVNKILSTYFEEHPDVATNIVSKAIAAARARIAARKARELARRKG 413
Query: 469 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERK 528
L S LPGKLADCS PE +E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+
Sbjct: 414 YLESLDLPGKLADCSEENPERAELFIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKA 473
Query: 529 DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
++KN EI+ LI A+G GV+ EDF LRY KIII+TDADVDGAHIRTLLLTFFYR
Sbjct: 474 RIDKVFKNNEIRALISAIGTGVR-EDFDYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYR 532
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEM 648
Y L ++G IY+ PLY++++GK + Y Y D E ++ NA S+QRFKGLGEM
Sbjct: 533 YMPELIEKGHIYIAQAPLYRIQKGKNIYYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEM 589
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
P QLW+TT+NPE R L ++ IEDAAEA+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 590 NPQQLWDTTMNPETRRLIRVTIEDAAEADRLFSILMGEQVGPRREFIIQHAKEVMNID 647
>gi|116871428|ref|YP_848209.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740306|emb|CAK19424.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 646
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 432/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SLEV V R+G +Y+Q++ RG V + D +GT + F PD Q+FT
Sbjct: 134 NALSTSLEVYVHREGQKYYQRFERGDVVMDMEVQ----GETDYRGTIVHFTPDPQIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKVFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQ++Y Y D +L+ +S + YSIQR+KGLGEM P QLW+TT+NPE R L
Sbjct: 546 YQIKHGKQIEYVYSDGQLEDYLASLDKDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ I+DA +A+ F LMG RV+ R++ I +NA + NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEENAQYVKNLD 645
>gi|229176169|ref|ZP_04303661.1| DNA gyrase subunit B [Bacillus cereus MM3]
gi|228607328|gb|EEK64658.1| DNA gyrase subunit B [Bacillus cereus MM3]
Length = 640
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 438/643 (68%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I ++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TIVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|190710567|gb|ACE95114.1| gyrase subunit B [Bacillus thuringiensis serovar toumanoffi]
Length = 627
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/635 (51%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSETFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|190710551|gb|ACE95106.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
gi|190710565|gb|ACE95113.1| gyrase subunit B [Bacillus thuringiensis serovar sumiyoshiensis]
gi|190710591|gb|ACE95126.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
Length = 627
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/635 (51%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|302391744|ref|YP_003827564.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302203821|gb|ADL12499.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 637
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/640 (49%), Positives = 438/640 (68%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +EQIQVLEGLEAVRKRP MYIGSTG +GLHHLV+E +DN++DE AG+ I+V +
Sbjct: 9 YNAEQIQVLEGLEAVRKRPGMYIGSTGTKGLHHLVWEAVDNSIDEFLAGHGEEIKVKIKE 68
Query: 137 DN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ IP+++HP A + VLT LHAGGKF SSGY VSGGLHGVG+SVV
Sbjct: 69 GSIISVEDQGRGIPVEVHPDKKLPAAQLVLTTLHAGGKF--DSSGYKVSGGLHGVGISVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE+T+WR+G Y Q+Y +G PVT +S + GT+I F PD+ +F
Sbjct: 127 NALSEWLELTIWRNGYTYTQQYEKGVPVTEFE----KSNSTTKTGTKIEFKPDEDIFDN- 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+++ + +A R++E AFLN L I+L D+ P + Y + GGLE ++ +LN D+
Sbjct: 182 VKYKFDVLANRLQESAFLNKGLKISLV--DTRPGLEKEVTYQYDGGLEAFIDYLNQDRDL 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD +V ++VD +++A Q+ + ++++ + +AN+I T DGG H+ G K +LTR N
Sbjct: 240 LHDDIVYLEEEVDDTYVEVAFQY-NKSFNERIYSFANNINTHDGGYHLTGFKTALTRAFN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ K + +K D L+G +REGLT +++V++ P+FEGQTK +LGN E+R VV+ +V
Sbjct: 299 NYAKDNNLLKKSDPKLTGRDLREGLTAVVNVKLTEPQFEGQTKAKLGNSEIRSVVEGAVY 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
YL +YL H D+ +++K+L A+KA AAK+A++L ++K VL ++SLPGKL+DCSS
Sbjct: 359 NYLNQYLPRHHDMAKEVINKALEAVKARKAAKKAKELTKRKGVLNNNSLPGKLSDCSSRK 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
EESE+++VEGDSAGGSAKQGR+R FQAILPL+GKILNVER + N EI +I AL
Sbjct: 419 SEESELYLVEGDSAGGSAKQGRNRDFQAILPLKGKILNVERARLNKIINNNEIAAIITAL 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F + LRYHKIII+TDADVDGAHI TL+LT FYRY L EG +YV PPL
Sbjct: 479 GTGI-GEEFNIDKLRYHKIIIMTDADVDGAHICTLILTLFYRYMPELIREGHVYVAQPPL 537
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YKV +Y Y D +L+K + + + SIQR+KGLGEM P QLWETT+NPE R L+
Sbjct: 538 YKVTYRGDEEYIYTDKQLQKYLADLDRSKV-SIQRYKGLGEMNPSQLWETTMNPENRKLQ 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++++++ EA+ +F+ LMG++ R+E I A+L NLD
Sbjct: 597 EIMVDEEREADSIFTRLMGSKAKLRREFIMANADLASNLD 636
>gi|392403099|ref|YP_006439711.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
gi|390611053|gb|AFM12205.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
Length = 668
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/655 (48%), Positives = 432/655 (65%), Gaps = 26/655 (3%)
Query: 64 ATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQ 123
ATE VS+ Y + +IQVLEGLEAVRKRP MYIGST GLHH+VYE++DN +DEA
Sbjct: 26 ATEEPMHGHVSEEYNASKIQVLEGLEAVRKRPGMYIGSTDLPGLHHMVYEVVDNCIDEAM 85
Query: 124 AGYASNIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYS 174
AG+ IEV + ++DN IP+D+HP S +E VLT LHAGGKFG Y
Sbjct: 86 AGHCDTIEVEISKGNIISVSDNGRGIPVDIHPKVGVSTVEVVLTKLHAGGKFG--DGAYK 143
Query: 175 VSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTR 234
VSGGLHGVG+SVVNALSE +EV V RDG ++H ++RGK L ++GT
Sbjct: 144 VSGGLHGVGVSVVNALSEWVEVDVHRDGKQHHIAFNRGKTRAPLKAK----GPSKKRGTT 199
Query: 235 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF--AG 292
+ F D Q+F T +++ ++T++ R+RELAFLN + I +R D + + E+ F G
Sbjct: 200 VTFLADSQIFDT-LEYRYDTLSSRLRELAFLNKNVKITIR----DTREKEVKEHVFQYKG 254
Query: 293 GLEEYVQWLNTDKKPLHDVVGFR-KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
G+ E+V+ L K PL + + DGI ++LA+++C D YS+ + +AN+I T +GG
Sbjct: 255 GIVEFVKMLTEKKNPLQKKPIYAIQQKDGIQVELAIEYC-DTYSEQIFTFANAIHTREGG 313
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
TH+EG + +LTR LN KK K + L+G+ VREGL ++S+ +PNP+FEGQTK +
Sbjct: 314 THLEGFRTALTRALNEYKKKLGYDKKVEEPLTGDDVREGLVLVLSILIPNPQFEGQTKMK 373
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN EV+ +V V E L EY E +P ++ K + A A +AA++A++LVR+KS L
Sbjct: 374 LGNGEVKGIVTSVVYEKLCEYFEENPQDAKRVIEKCMQAALARIAARKAKELVRRKSALE 433
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
+ LPGKLADCS+ P++ E+FIVEGDSAGGSAKQGR+R FQAILPL+GKI NVE+
Sbjct: 434 GAGLPGKLADCSAREPKDCELFIVEGDSAGGSAKQGRNRHFQAILPLKGKITNVEKTKLD 493
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+ + E+ LI A+G G+ G +F + LRYHKI+I+TDADVDGAHI+TLLLTFF+R+
Sbjct: 494 KILGDGEVAALISAIGCGI-GAEFNIDKLRYHKIVIMTDADVDGAHIQTLLLTFFFRHMP 552
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 651
L ++G +Y+ PPLY V GK+ Y Y D E K+ F + + Y IQR+KGLGEM P
Sbjct: 553 LLIEKGGLYIARPPLYLVSHGKEKFYAYSDQEKDKIIKGFKAESKYVIQRYKGLGEMNPE 612
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
QLWETT++P +R+L Q+ ++DA A+ F LMG V+ R+ I+ NA + LD
Sbjct: 613 QLWETTMDPARRVLMQVSVDDAVIADETFIILMGDEVEPRRRFIEDNAKKVEELD 667
>gi|423572847|ref|ZP_17548966.1| DNA gyrase subunit B [Bacillus cereus MSX-D12]
gi|423608165|ref|ZP_17584057.1| DNA gyrase subunit B [Bacillus cereus VD102]
gi|401216316|gb|EJR23028.1| DNA gyrase subunit B [Bacillus cereus MSX-D12]
gi|401238174|gb|EJR44615.1| DNA gyrase subunit B [Bacillus cereus VD102]
Length = 642
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/657 (49%), Positives = 443/657 (67%), Gaps = 30/657 (4%)
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S+ + +EN +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DE
Sbjct: 2 SMEQKQMQEN----SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDE 57
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY I V++ DNSI P+ + + A+E ++TVLHAGGKFGG
Sbjct: 58 ALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYK 117
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
S LHGVG SVVNALS LEV V R+G ++QKY RG PV L + D+ G
Sbjct: 118 VSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTG 171
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFF 290
T RF PD ++F ++ +T+A R+RELAFLN KLTI ++E Q E+ +
Sbjct: 172 TITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHY 226
Query: 291 AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +
Sbjct: 227 EGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYE 285
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTK
Sbjct: 286 GGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTK 345
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS
Sbjct: 346 TKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSA 405
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+
Sbjct: 406 LEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKAR 465
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+ N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY
Sbjct: 466 LDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRY 524
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
+ + + G IY+ PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM
Sbjct: 525 MRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMN 584
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 585 PAQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 641
>gi|338811356|ref|ZP_08623574.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
gi|337276646|gb|EGO65065.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
Length = 637
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/640 (50%), Positives = 438/640 (68%), Gaps = 26/640 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V +
Sbjct: 12 YGAEQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCDQVNVIIRK 71
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D+SI P+ +H T K ALE V+TVLHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 72 DDSITVIDNGRGIPVGMH-ETGKPALEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V R+G Y ++ RG + + GT + F PD Q+F
Sbjct: 129 NALSEWLEVQVKREGKIYQMRFERGYTSQAMK----QIGETTETGTTVTFKPDAQIFEET 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ + +T+ R+RELAFLN L I L +D + E+ F GG+ +V+ LN K
Sbjct: 185 V-YSFDTLKHRLRELAFLNKGLKITL----TDERSGESREFCFEGGIVSFVEHLNHSKDV 239
Query: 308 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH + + + D +++ALQ+ +D+Y++ + + N+I T +GGTH+ G K +LTRT+N
Sbjct: 240 LHPKPIYVEGIKDTTVVEIALQY-NDSYNENIFTFVNNINTQEGGTHLSGFKTALTRTMN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K +K+ D +LSGE VREGLT ++S++V P+FEGQTK++LGN E++ +VD
Sbjct: 299 DFARKLNLLKENDENLSGEDVREGLTGVVSLKVQQPQFEGQTKSKLGNSEIKGIVDTLFS 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L+E+ E +P V I+ K++ A +A AA++ARDL R+K+ L S+LPGKLADCSS
Sbjct: 359 EGLSEHFEENPSVTRKIIEKAILASRARDAARKARDLTRRKTALEVSALPGKLADCSSRD 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P ++EI++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I A
Sbjct: 419 PMQTEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDRILNNEEIRTMITAF 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F E RY +III+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPL
Sbjct: 479 GSGI-GEEFDLEKSRYGRIIIMTDADVDGAHIRTLLLTFFYRYMKPLIEAGRVYIAQPPL 537
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y V++GK+ Y Y D E+ ++ + + S+QR+KGLGEM P QLWETT+NPE R
Sbjct: 538 YLVKKGKEHWYLYSDPEMDQLLAKIGRENI-SVQRYKGLGEMNPEQLWETTMNPEGRTNL 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ ++DA EA+ +F+ LMG +V+ R++ I++ A+ V NLD
Sbjct: 597 QVTLDDAMEADEIFTILMGDKVEPRRKFIEDYAHRVRNLD 636
>gi|187777362|ref|ZP_02993835.1| hypothetical protein CLOSPO_00918 [Clostridium sporogenes ATCC
15579]
gi|187774290|gb|EDU38092.1| DNA gyrase, B subunit [Clostridium sporogenes ATCC 15579]
Length = 637
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 331/643 (51%), Positives = 447/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE V V RDG + QKY RG P T L V + GT+I F PD ++F
Sbjct: 125 VVNALSEHCNVEVRRDGHIWLQKYERGIPKTGLDI----VGDTEDHGTKIYFKPDVEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F E +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFNLEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELVEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + + +IQR+KGLGEM P QLWETT+NPE R
Sbjct: 534 PLYRIYKAKKELYVYSDKELDEALLELGGKDTNTNIQRYKGLGEMDPEQLWETTMNPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLD 705
L Q+ IEDA A+ +F+ LMG +V+ R++ I+N A+ +VNLD
Sbjct: 594 TLLQVTIEDAMAADEIFTILMGTKVEPRRDFIENNADKVVNLD 636
>gi|325102923|ref|YP_004272577.1| DNA gyrase subunit B [Pedobacter saltans DSM 12145]
gi|324971771|gb|ADY50755.1| DNA gyrase subunit B [Pedobacter saltans DSM 12145]
Length = 652
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/661 (48%), Positives = 449/661 (67%), Gaps = 31/661 (4%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+EA ++N Y ++ IQVLEGLEAVRKRPAMYIG TG +GLHHLVYE++DN++DEA A
Sbjct: 2 SEAIEKNS---NYSADNIQVLEGLEAVRKRPAMYIGDTGVKGLHHLVYEVVDNSIDEALA 58
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
GY ++I V + +NSI P ++ NKSALE V+TVLHAGGKF + Y V
Sbjct: 59 GYCTDILVTIHKNNSITVEDNGRGIPTGINKKENKSALEIVMTVLHAGGKFDKDT--YKV 116
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+S VNALS + V R+G + Q+Y RGKP+ V + DR GT
Sbjct: 117 SGGLHGVGVSCVNALSTHVITVVHREGKIFTQEYERGKPL----FDVKVIGESDRTGTIQ 172
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGG 293
F PD ++FT ++ +T+AGR+RELAFLN + + L E E + E++ GG
Sbjct: 173 TFQPDPEIFTQTTEYRFDTLAGRLRELAFLNKGIRLVLTDEREVKEDGSFLSEEFYSEGG 232
Query: 294 LEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
L E+V +L++ + PL D + + +GI ++LA + +++Y++ + Y N+I TI+GG+
Sbjct: 233 LREFVTFLDSTRTPLIPDAIYIEGEKNGIPVELAFTY-NNSYNENIHSYVNNINTIEGGS 291
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H+ G + LTRTL S +KS +K+ + ++G+ REGLT +ISV+V P+FEGQTKT+L
Sbjct: 292 HVAGFRRGLTRTLKSYAEKSGLLKNLKVEITGDDFREGLTAVISVKVQEPQFEGQTKTKL 351
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV VD +V E L +LE +P I++K + A A AA++AR++V++K+V+
Sbjct: 352 GNTEVTGAVDIAVGEALGNFLEENPKEAKLIVNKVILAATARAAARKAREMVQRKNVMGG 411
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S LPGKLADC++ P E+F+VEGDSAGG+AKQGR+R FQAILPL+GKILNVE+ E
Sbjct: 412 SGLPGKLADCANKDPHVCELFLVEGDSAGGTAKQGRNRDFQAILPLKGKILNVEKAMEHK 471
Query: 533 MYKNEEIQNLIRALGLGV-KGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
+Y+N+EI+N+ ALG+ + ED K+ E LRYHK+II+TDADVDG+HI TL+LTFF+R
Sbjct: 472 IYENDEIKNIFTALGVSIGTAEDEKELNLEKLRYHKVIIMTDADVDGSHITTLILTFFFR 531
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKG 644
Y K L + G IY+ PPLY+V++GK+ +YC++ DA ++++K ++++ IQR+KG
Sbjct: 532 YMKQLIEAGNIYIAAPPLYQVKKGKEFEYCWNDVQRDAAVQRLKGGGKEDSVH-IQRYKG 590
Query: 645 LGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
LGEM QLWETTLNPE R LK+ IE AAEA+ +FS LMG V R+E I+ A +
Sbjct: 591 LGEMNAEQLWETTLNPETRTLKRATIESAAEADRIFSMLMGDEVAPRREFIEKNARYAKI 650
Query: 705 D 705
D
Sbjct: 651 D 651
>gi|258513372|ref|YP_003189594.1| DNA gyrase subunit B [Desulfotomaculum acetoxidans DSM 771]
gi|257777077|gb|ACV60971.1| DNA gyrase, B subunit [Desulfotomaculum acetoxidans DSM 771]
Length = 635
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/644 (50%), Positives = 450/644 (69%), Gaps = 25/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ YG+E+IQVLEGLEAVR+RP MYIGSTG +GLHHLVYE++DN++DEA AGY +IEV
Sbjct: 5 ITERYGAEEIQVLEGLEAVRRRPGMYIGSTGAKGLHHLVYEVVDNSIDEAMAGYCDHIEV 64
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H T SA+E V+T LHAGGKFGG S LHGVG
Sbjct: 65 FINEDNSITVTDNGRGIPVDIHSKTGNSAVELVMTTLHAGGKFGGGGYKVSGG--LHGVG 122
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS+ LEV V R G + Q+Y RG PV+ L V GT+I F PD+++
Sbjct: 123 VSVVNALSKWLEVEVRRQGKIFFQRYERGIPVSDLKI----VGDSSFTGTKITFSPDEEI 178
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F I F T+ R++ELA+LN ++ I L+ D N Y + GG++++V +N
Sbjct: 179 FEDVI-FSRETLEQRLQELAYLNSRVKIYLK----DFINNLEFSYMYEGGIKDFVAHINQ 233
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
DK L + + F ++ D + +++A+Q+ +DAY + + Y N+I TIDGGTH G +++LT
Sbjct: 234 DKILLPEAPLYFVREKDHVMVEVAMQY-TDAYFENLFSYVNNIHTIDGGTHEAGFRSALT 292
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N KK+ +K+ + +LSGE +REGLT +IS++VP P+FEGQTK +LGN EVR +VD
Sbjct: 293 RVINDYAKKNNLIKNNEGNLSGEDIREGLTAVISIKVPEPQFEGQTKGKLGNSEVRGIVD 352
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L+ +LE +P V I+ KS+SA +A AA++AR+L R+K+VL SS+LPGKL+DC
Sbjct: 353 SVVAEGLSTFLEENPAVSKKIIEKSISAFRAREAARKARELTRRKNVLESSTLPGKLSDC 412
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ P ESE+++VEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + N+EI+ +
Sbjct: 413 SNRDPSESELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARLDKILNNDEIRAM 472
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G+ GEDF RYHK+II+TDADVDG+HIRTLLLTFFYRY + L + G I++
Sbjct: 473 ITALGTGI-GEDFDITKARYHKLIIMTDADVDGSHIRTLLLTFFYRYMRPLIEAGYIFIA 531
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++++GK Y Y D +L+ N + SIQR+KGLGEM QLW+TT++PE
Sbjct: 532 QPPLYRLKKGKMEIYLYSDRDLENKLKEVGRNGI-SIQRYKGLGEMDAQQLWDTTMDPEN 590
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R + + +E+AAEA+ +F +LMG RV+ R+ I ++A ++ NLD
Sbjct: 591 RTILMVELENAAEADKIFDTLMGDRVEPRRSFINKHAHDVRNLD 634
>gi|190710589|gb|ACE95125.1| gyrase subunit B [Bacillus thuringiensis serovar darmstadiensis]
Length = 627
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/635 (51%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYANHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|145577977|gb|ABP82707.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar higo]
gi|145577979|gb|ABP82708.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar kenyae]
gi|145578009|gb|ABP82723.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar azorensis]
gi|145578021|gb|ABP82729.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar zhaodongensis]
Length = 632
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|145577981|gb|ABP82709.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar seoulensis]
Length = 632
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGG AKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGCAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|297588052|ref|ZP_06946696.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
gi|297574741|gb|EFH93461.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
Length = 638
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 442/647 (68%), Gaps = 28/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS IP++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSVIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L V RDG Y Q++ +GK VT LT V GT I F PD +F
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTELTVIKENVRG---TGTTIEFMPDNTIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T + FD N +A R RE+AFLN + I E+ Y E F + GG++ +V+++N
Sbjct: 179 ET-LNFDKNVLAKRFREMAFLNKGVKIEFA-----DEREGYKELFHYEGGIKSFVEYINK 232
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LT
Sbjct: 233 SKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALT 291
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD
Sbjct: 292 RALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVD 351
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC
Sbjct: 352 SVVYEHLSFYFEENPKIVKTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADC 411
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ E +EIF+VEGDSAGGSAK GRD +FQAILPLRGKILNVE+ + + EI+ +
Sbjct: 412 QSSDIEHNEIFLVEGDSAGGSAKGGRDNKFQAILPLRGKILNVEKAHLERVLNSNEIKAM 471
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F LRY KI+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+
Sbjct: 472 ITAFGTGI-GKNFDISKLRYGKIVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIA 530
Query: 603 VPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY + +G K ++YCY + EL++ + + +QR+KGLGEM QLW+TT+NPE
Sbjct: 531 QPPLYGIIKGVKVMEYCYTEKELEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPE 590
Query: 662 QRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ I ED E + F LMG V+ R+E I QNA N+D
Sbjct: 591 HRILIKVEIDGEDENELDNTFDVLMGDNVEPRREFIEQNAVYAQNID 637
>gi|255659815|ref|ZP_05405224.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
gi|260847890|gb|EEX67897.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
Length = 688
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/644 (50%), Positives = 443/644 (68%), Gaps = 24/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQ+LEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AGY +I+V
Sbjct: 57 VEADYGAEQIQILEGLEAVRMRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDV 116
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H + K A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 117 TIHKDNSITVVDNGRGIPVDMH-ESGKPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 173
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALS S+EV V RDG Y + RG LT + GTR+ F PD ++
Sbjct: 174 VSVVNALSTSMEVQVKRDGKIYEIAFERGVTTKPLTVVG----TTTETGTRVHFMPDPEI 229
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F+ + + T+ R+REL+FLN +TI L E +P +++ ++ F GG+ +V+ LN
Sbjct: 230 FSVTT-YSYETLRHRLRELSFLNHGITIGLHDERVEPVRSE--QFHFDGGISSFVEHLNR 286
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ L+ + + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 287 KKEVLNPEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKLALT 345
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R N +K +KDKD +LSG+ VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 346 RAANDFARKQGILKDKDSNLSGDDVREGLTCVISLKIREPQFEGQTKTKLGNSEVRGIVD 405
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L+EY + +P + I+ K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 406 SIVTEGLSEYFDENPAITKRIIDKAIMAARAREAARKARELTRRKNALEVSSLPGKLADC 465
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE++EI++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ ++ N EI+ +
Sbjct: 466 SVKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTM 525
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ EDF RY KIII+TDADVDGAHIRTLLLTF YRY K L + G +Y+
Sbjct: 526 ITAFGTGIS-EDFDLSKRRYGKIIIMTDADVDGAHIRTLLLTFLYRYMKPLIEHGHVYIA 584
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ +GK+ Y Y D EL K + + ++QR+KGLGEM P QLWETT++PE
Sbjct: 585 QPPLYQIRKGKKHWYTYSDDELSKKLDEVGRDGV-TVQRYKGLGEMNPEQLWETTMDPEG 643
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + ++ +EDA EA+ +F+ LMG +V+ R++ I+ A LV NLD
Sbjct: 644 RTMLRVEMEDAEEADELFTILMGDKVEPRRQFIEENAKLVRNLD 687
>gi|335433679|ref|ZP_08558497.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
gi|334898482|gb|EGM36588.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
Length = 637
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 431/643 (67%), Gaps = 27/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DNA+DEA AG+ I V +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDTIAVTMHD 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IPID H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVVDDGRGIPIDTHEEYDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS LEV V R+G + Q + G P LT + ++ GT IRFWPD +F TT
Sbjct: 125 NALSAKLEVEVRREGSVWKQTFDHGAPADDLT-EIEALEDSSETGTSIRFWPDGDIFETT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
QF +T+ R+RELAFLN + I L E ++Q E F + GG+ E+V++LN K
Sbjct: 184 DFQF--STLENRLRELAFLNSGVEITLADE-----RDQRRETFQYDGGIREFVEYLNETK 236
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
PLHD V+ F + +G+ +++ALQ ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 237 DPLHDGVIYFEDESEGVQVEVALQATTELQG-SIHAFANNINTREGGTHLTGFKTALTRV 295
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N + + D + +L GE +REG+T +ISV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 296 VNDYATDNDLLSDIEETLKGEDIREGMTAVISVKHPDPQFEGQTKTKLGNSEVRGVVESA 355
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ + L Y E HPDV +I+ K++ A KA AA++A +L R+KS L S++LPGKLADC +
Sbjct: 356 MHQNLGTYFEEHPDVAGAIVRKAVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQT 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E+E+FI EGDSAGGSAKQ R+ FQA+LP+RGKILNVE+ + +N++I+N+I
Sbjct: 416 KEPSEAELFIAEGDSAGGSAKQARNPEFQAVLPIRGKILNVEKHRLDRILENDQIRNIIT 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G++F + LRY KII TDADVDGAHIRTLLLTFFYR+ + L + G IY P
Sbjct: 476 ALGTGV-GDEFDIDELRYEKIIFATDADVDGAHIRTLLLTFFYRHMRPLLENGHIYAARP 534
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + DAE ++ IQRFKGLGEM P QLW+TT+NPE R
Sbjct: 535 PLYRIRYRGETYDAMTDAERDEIIEEKCDGNPTQIQRFKGLGEMNPKQLWDTTMNPENRF 594
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQN---AANLVNL 704
LKQ+ I+DAA A+ +FS LMG V+ RK+ I+ AN V++
Sbjct: 595 LKQITIDDAAAADKMFSVLMGDAVEPRKQFIKENSPEANWVDI 637
>gi|392970924|ref|ZP_10336322.1| DNA gyrase subunit B [Staphylococcus equorum subsp. equorum Mu2]
gi|392510926|emb|CCI59581.1| DNA gyrase subunit B [Staphylococcus equorum subsp. equorum Mu2]
Length = 640
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 431/643 (67%), Gaps = 21/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA +E+
Sbjct: 7 TEDYGAGQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEALAGYADEVEIV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+ + + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEEDNWIKVTDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQV 243
SVVNALSE LEV V++D YHQ Y +G P L + D+ GT IRF D ++
Sbjct: 125 SVVNALSEDLEVYVYKDNKIYHQAYKKGVPQFDLKV----IGETDKPTGTVIRFKADPEI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT +++++T+ R RELAFLN ++I LR E E+ + + Y + GG++ YV+ LN
Sbjct: 181 FTETTEYNYDTLQQRTRELAFLNKGISITLRDERE--EEVREDSYHYEGGIKSYVEMLNE 238
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+PLHD + + D I +++ALQ+ + Y+ +L YAN+I T +GGTH EG K +L+
Sbjct: 239 TKEPLHDEPIYVHESKDDIEVEIALQY-NKGYATNLLTYANNIHTYEGGTHEEGFKRALS 297
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LNS G SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD
Sbjct: 298 RVLNSYGLNSKIIKEDKERLSGEDTREGLTAVVSIKHSDPQFEGQTKTKLGNSEVRQVVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E +L +P V ++ KS+ A A LAAK+AR++ R+KS L SSLPGKLADC
Sbjct: 358 KLFAELFERFLYENPQVGRIVVEKSIMASHARLAAKKAREVTRRKSALEISSLPGKLADC 417
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P SEIFIVEGDSAGGS K GRD QAILPLRGKILNVE+ + N EI+++
Sbjct: 418 SSKDPSRSEIFIVEGDSAGGSTKSGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSM 477
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE F RYHKI+++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 478 ITAFGTGIGGE-FDLSKARYHKIVLMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIA 536
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+K+ +GKQ Y +++ EL K+K + +SI R+KGLGEM QLWETT+NPE
Sbjct: 537 QPPLFKLTQGKQKYYVFNERELDKLKEELDPSPKWSISRYKGLGEMNADQLWETTMNPEH 596
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R L Q+ +EDA EA+ VF LMG V+ R++ I++ A NLD
Sbjct: 597 RALLQVSLEDAIEADQVFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|269925173|ref|YP_003321796.1| DNA gyrase subunit B [Thermobaculum terrenum ATCC BAA-798]
gi|269788833|gb|ACZ40974.1| DNA gyrase, B subunit [Thermobaculum terrenum ATCC BAA-798]
Length = 640
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/648 (50%), Positives = 433/648 (66%), Gaps = 25/648 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V Y +E IQVLEGLEAVRKRP MYIGST RGLHHL+YEI+DN+VDE+ AGY
Sbjct: 5 EEKVISNYNAESIQVLEGLEAVRKRPGMYIGSTDVRGLHHLIYEIVDNSVDESMAGYCDF 64
Query: 130 IEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + D S IP+ +HP KSALE V+TVLHAGGKFG S GY VSGGLH
Sbjct: 65 IEVHIHKDKSVTVRDNGRGIPVGIHPKLKKSALEVVMTVLHAGGKFG--SGGYKVSGGLH 122
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALSE L V R+G + Q Y RG P T + + DR GT I F PD
Sbjct: 123 GVGASVVNALSEYLIAEVHREGKIWRQSYERGVPKTPVEA----IGDTDRTGTIITFKPD 178
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+F+T +++ +T+A R RE+A+LN L I + D E Y F GG+ +V+
Sbjct: 179 ADLFST-LEYQFDTLAQRFREIAYLNKGLKITFIDDRDDKELTLY----FEGGIASFVRH 233
Query: 301 LNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN ++ L + + K ++GI +++A+Q+ +D +++++ + N+I T+DGGTH+ G +
Sbjct: 234 LNKNRNVLTEKPIYIHKQLNGIDVEVAIQY-TDGFNESLHTFTNNINTVDGGTHLTGFRT 292
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTRTLN K+ +KD D L+GE VREGLT ++SV++P+P+FEGQTK++LG+ E +
Sbjct: 293 ALTRTLNDYAVKNGLLKDSDTKLTGEDVREGLTAVVSVKLPDPQFEGQTKSKLGSSEAER 352
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
VV V++ L Y + +P I+ K+++A +A AA++ARDLV +K L +LPGKL
Sbjct: 353 VVASVVRDGLLSYFDENPSDAKRIIEKAITAARAREAARKARDLVVRKGALDGMTLPGKL 412
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P SE++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ M + EI
Sbjct: 413 ADCSERDPRHSELYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKMLSSAEI 472
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+ LI ALG G+ G+ F LRYH+I ++TDADVDGAHIRTLLLTFF+R+ + G +
Sbjct: 473 KALITALGTGI-GDSFDISKLRYHRIFLMTDADVDGAHIRTLLLTFFFRHMPDIIKNGHL 531
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS-IQRFKGLGEMMPVQLWETTL 658
Y+ +PPLYK++ GK+ + Y D E +V + N + IQR+KGLGEM P QLWETT+
Sbjct: 532 YIAMPPLYKIQVGKEKYFVYSDEERDRVLAGLNGNRSKAIIQRYKGLGEMNPEQLWETTM 591
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+P R + Q+ IEDA +A+ +F LMG+ V RK+ IQ+ A V NLD
Sbjct: 592 DPSTRTIMQVTIEDAVKADELFDMLMGSNVAPRKKFIQSHAKSVRNLD 639
>gi|157363918|ref|YP_001470685.1| DNA gyrase subunit B [Thermotoga lettingae TMO]
gi|157314522|gb|ABV33621.1| DNA gyrase, B subunit [Thermotoga lettingae TMO]
Length = 630
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/646 (48%), Positives = 426/646 (65%), Gaps = 32/646 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I++L+GLEAVR RP MYIGSTG GLHHLVYEI+DN++DE AG+ + I V L
Sbjct: 4 YKAESIRILKGLEAVRLRPGMYIGSTGKSGLHHLVYEIVDNSIDEVMAGFCNTIRVTLFE 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN+ IP+D HP T +SALE V+T LHAGGKF S + Y VSGGLHGVG SVV
Sbjct: 64 DNTVEIEDNGRGIPVDTHPETGRSALEVVMTTLHAGGKF--SKNIYKVSGGLHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV + ++G Y+QKYSRG P C V + D+QGT +RF PD Q+F+
Sbjct: 122 NALSEILEVWIHKEGKIYYQKYSRGFP----QCEVTVIGETDKQGTIVRFKPDDQIFSI- 176
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEY----FFAGGLEEYVQWLNT 303
++FD + I ++RELAFLNP++ I ++ NEY + GGL EY ++L +
Sbjct: 177 LKFDPDLIENKLRELAFLNPQVKIIF--------EDLANEYTVTMHYEGGLREYARYLAS 228
Query: 304 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+KP+H+ + ++D I + +A+ + + + YAN+IRTID GTH+ K + T+
Sbjct: 229 GRKPIHETIEVSGELDEIIVKIAIMYTDSYEEEKIYSYANNIRTIDHGTHVTAFKNTFTK 288
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN + +K KD S SGE VREGL I++V + PEFEGQTK++LG+ V +
Sbjct: 289 MLNEYARSLGILK-KDESFSGEDVREGLIAIVTVLMKEPEFEGQTKSKLGSESAGIAVSR 347
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++E L+EY E++ VL IL K L ++A AA++AR+L R+K+ + + SLPGKLADC
Sbjct: 348 ILKEKLSEYFEVNKQVLKVILEKVLKTMRAREAARKARELARRKNAMENLSLPGKLADCV 407
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S+ E SE+FIVEGDSAGGSAKQ RDR +QAILPLRGKILNVE+ + NE+I+++I
Sbjct: 408 SSNVENSELFIVEGDSAGGSAKQARDREYQAILPLRGKILNVEKSSMQKLLANEQIKDII 467
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ G+ F LRY KIII+TDAD+DGAHIRTLLLTFF+RY K L ++G IY+ V
Sbjct: 468 VAVGTGI-GDSFDSSKLRYGKIIIMTDADIDGAHIRTLLLTFFFRYMKPLIEDGRIYIAV 526
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYKV Y Y + + + ++ +QR+KGLGEM P QLWETT+NPE R
Sbjct: 527 PPLYKVSFSSNSVYVYTEEDFQALRRELGEERKLEVQRYKGLGEMNPEQLWETTMNPETR 586
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
L Q+ IE+A EA+ +F LMG R+ I+ A + + +LD+
Sbjct: 587 KLIQVNIENAEEADALFEILMGESPSERRRFIERHA--LKVTYLDV 630
>gi|404406489|ref|YP_006689204.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2376]
gi|422810893|ref|ZP_16859304.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-208]
gi|378751098|gb|EHY61689.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-208]
gi|404240638|emb|CBY62038.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2376]
Length = 646
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/640 (51%), Positives = 432/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SLEV V R+G +Y+Q++ RG V + D +GT + F PD Q+FT
Sbjct: 134 NALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQV+Y Y D +L+ +S + YSIQR+KGLGEM P QLW+TT+NPE R L
Sbjct: 546 YQIKHGKQVEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ I+DA +A+ F LMG RV+ R++ I++ A V NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLD 645
>gi|429190218|ref|YP_007175896.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|448326129|ref|ZP_21515498.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|429134436|gb|AFZ71447.1| DNA gyrase, B subunit [Natronobacterium gregoryi SP2]
gi|445613038|gb|ELY66749.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
Length = 644
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/636 (49%), Positives = 434/636 (68%), Gaps = 19/636 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DRSVSVTDDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG Y + G+PV + V ++S + GT IRFWPD +F +
Sbjct: 125 NALSERLEAEVKRDGGVYRHAFEGGEPVGDME-RVRDMESDEETGTEIRFWPDGSIFESD 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTD 304
+F +T+A R+RELAFLN + I LR +ED+D E Y + GG+ E+V++LN
Sbjct: 184 -EFSFSTLANRLRELAFLNSGVRITLRDEREDADDAAGVATETYEYEGGIREFVEYLNET 242
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +H+ V+ F + I +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHETVIYFEDETQNIHVEVAMQ-ATKELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N ++ + D D +L GE +REGLT ++S++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYANENDLLSDLDENLKGEDIREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ + L Y E PD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 AMHDGLGTYFEEQPDTAEAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ PEE+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 TKDPEEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 482 TAIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V + +AE ++ + +QRFKGLGEM P QLW+TT+NP+ R
Sbjct: 541 PPLYRVRYRGETYDAMTEAERDEIVAEKCDGNPTQVQRFKGLGEMNPQQLWDTTMNPDNR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 601 ILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKENA 636
>gi|83816748|ref|YP_446507.1| DNA gyrase subunit B [Salinibacter ruber DSM 13855]
gi|83758142|gb|ABC46255.1| DNA gyrase, B subunit [Salinibacter ruber DSM 13855]
Length = 652
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/645 (48%), Positives = 435/645 (67%), Gaps = 24/645 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIG G RGLHHLVYE+LDN++DEA AG+ I V +
Sbjct: 15 YAASNIQVLEGLEAVRKRPSMYIGDVGLRGLHHLVYEVLDNSIDEAMAGHCDEIGVEIYE 74
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D HPA ++SALE V+TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 75 DGSVSIEDNGRGIPVDQHPAEDRSALEVVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVV 132
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NAL+ EVTVWRDG + Q Y G P + V P+++ + GTRIRFWPD +F T
Sbjct: 133 NALASRFEVTVWRDGSVWEQNYLCGVPEDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT 191
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+F T++ R+RELAFLN + I + R+ED + Y+ G+ +V +L+
Sbjct: 192 -EFRFETLSDRLRELAFLNAGVRIRVEDHREEDKGLARETYHS---EEGIIGFVDYLDEA 247
Query: 305 KKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ + D + + DG + ++LA+Q+ +D Y+ +L + N+I T +GGTH+ G + +LTR
Sbjct: 248 RDSILDETIYIAETDGEVPVELAMQY-NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTR 306
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL +K+ + D LSG+ REGLT ++SV+V P+FEGQTKT+LGN +V+ +V+
Sbjct: 307 TLKRYAQKNDMLSDLKFDLSGDDFREGLTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVES 366
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ L +LE HPD + I+ K + A +A AA++AR+LV++K SLPGKLADCS
Sbjct: 367 LINTELGRWLEDHPDQAERIIEKVIQAAEARAAARKARELVQRKDAFSGGSLPGKLADCS 426
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PEE E+++VEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ + ++++IQN++
Sbjct: 427 SRDPEEGELYLVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARLDRILEHDQIQNIV 486
Query: 544 RALGLGVKG--EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
ALG G+ E+F +RYHKI+++TDADVDGAHIR+LLLTFFYR + L ++G IY+
Sbjct: 487 TALGTGLTSTEEEFNMNEMRYHKIVMMTDADVDGAHIRSLLLTFFYRQLRPLIEKGNIYI 546
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNP 660
+PPLY+++ G Q YC+ D E++ + ++ S+QR+KGLGEM P QLW TT+NP
Sbjct: 547 ALPPLYRIQNGSQEIYCWSDEEMQTRMAELRADGNSPSMQRYKGLGEMNPEQLWTTTMNP 606
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
E R ++Q+ I+DAA A+ +FS+LMG V+ R+E I+ A +D
Sbjct: 607 ETRKIQQVTIQDAAAADRLFSTLMGDSVEPRREFIERNAKYATID 651
>gi|167038684|ref|YP_001661669.1| DNA gyrase subunit B [Thermoanaerobacter sp. X514]
gi|300913756|ref|ZP_07131073.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561]
gi|307723227|ref|YP_003902978.1| DNA gyrase subunit B [Thermoanaerobacter sp. X513]
gi|166852924|gb|ABY91333.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter sp. X514]
gi|300890441|gb|EFK85586.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561]
gi|307580288|gb|ADN53687.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X513]
Length = 633
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 444/643 (69%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G + Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVVVKQRGKIFRQTYERGVPKTDLEIIG----ETEETGTTITFKPDKEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ F+++ +A R+RELAFLN + I L E D ++ +N + GG+ +V++LN +K
Sbjct: 179 ETV-FNYDVLAQRLRELAFLNKGINIRLIDE-RDGKEEVFN---YEGGIISFVKYLNRNK 233
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 234 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDTYTENIFSFANNIDTREGGTHLVGFKSALTK 291
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVIEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKTGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G++F LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+
Sbjct: 472 TALGTGI-GDEFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL ++ + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 531 PPLYKITKGKKVYYAYSDRELDRILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 TMLKVTLEDAIAADEIFTILMGDKVEPRREFIEKHAKTVRNLD 632
>gi|347547515|ref|YP_004853843.1| putative DNA gyrase subunit B [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980586|emb|CBW84487.1| Putative DNA gyrase subunit B [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 646
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 432/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SLEV V R+G +Y+Q++ RG V + D +GT + F PD Q+FT
Sbjct: 134 NALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKVFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQ++Y Y D +L+ +S + YSIQR+KGLGEM P QLW+TT+NPE R L
Sbjct: 546 YQIKHGKQIEYVYSDGQLEDYLASLDKDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ I+DA +A+ F LMG RV+ R++ I +NA + NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEENAQYVKNLD 645
>gi|145578001|gb|ABP82719.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar shandongiensis]
Length = 632
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P S I+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISGIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLGKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|145578017|gb|ABP82727.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar tohokuensis]
Length = 632
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T++ R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLSTRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQA LPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQATLPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|448340252|ref|ZP_21529225.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
gi|445630558|gb|ELY83819.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
Length = 642
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/635 (49%), Positives = 434/635 (68%), Gaps = 19/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG+ + + G+PV + V ++ D GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDDETGTEIRFWPDTDIFETG 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDAGDPVTETYEYDGGIREFVNYLNETR 241
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDDNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 480
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 481 AIGAGI-GDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 539
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE + + +QRFKGLGEM P QLWETT+NP+ R+
Sbjct: 540 PLYRIRYRGETYDAMTEAERDAIVAEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRI 599
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 600 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 634
>gi|403045150|ref|ZP_10900628.1| DNA gyrase subunit B [Staphylococcus sp. OJ82]
gi|402765214|gb|EJX19298.1| DNA gyrase subunit B [Staphylococcus sp. OJ82]
Length = 640
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 431/643 (67%), Gaps = 21/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA +E+
Sbjct: 7 TEDYGAGQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEALAGYADEVEIV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+ + + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEEDNWIKVTDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQV 243
SVVNALSE LEV V++D YHQ Y +G P L + D+ GT IRF D ++
Sbjct: 125 SVVNALSEDLEVYVYKDNKIYHQAYKKGIPQFDLKV----IGETDKPTGTVIRFKADPEI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT +++++T+ R RELAFLN ++I LR E E+ + + Y + GG++ YV+ LN
Sbjct: 181 FTETTEYNYDTLQQRTRELAFLNKGISITLRDERE--EEVREDSYHYEGGIKSYVEMLNE 238
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+PLHD + + D I +++ALQ+ + Y+ +L YAN+I T +GGTH EG K +L+
Sbjct: 239 TKEPLHDEPIYVHESKDDIEVEIALQY-NKGYATNLLTYANNIHTYEGGTHEEGFKRALS 297
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R LNS G SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD
Sbjct: 298 RVLNSYGLNSKIIKEDKERLSGEDTREGLTAVVSIKHSDPQFEGQTKTKLGNSEVRQVVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E +L +P V ++ KS+ A A LAAK+AR++ R+KS L SSLPGKLADC
Sbjct: 358 KLFAELFERFLYENPQVGRIVVEKSIMASHARLAAKKAREVTRRKSALEISSLPGKLADC 417
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P SEIFIVEGDSAGGS K GRD QAILPLRGKILNVE+ + N EI+++
Sbjct: 418 SSKDPSRSEIFIVEGDSAGGSTKSGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSM 477
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ GE F RYHKI+++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 478 ITAFGTGIGGE-FDLSKARYHKIVLMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIA 536
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPL+K+ +GKQ Y +++ EL K+K + +SI R+KGLGEM QLWETT+NPE
Sbjct: 537 QPPLFKLTQGKQKYYVFNERELDKLKEELDPSPKWSISRYKGLGEMNADQLWETTMNPEH 596
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R L Q+ +EDA EA+ VF LMG V+ R++ I++ A NLD
Sbjct: 597 RALLQVSLEDAIEADQVFEMLMGDVVENRRQFIEDNAVYANLD 639
>gi|190710601|gb|ACE95131.1| gyrase subunit B [Bacillus thuringiensis serovar neoleonensis]
Length = 627
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/635 (50%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQKNA 625
>gi|145577965|gb|ABP82701.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGETDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|301051746|ref|YP_003789957.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis
str. CI]
gi|300373915|gb|ADK02819.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis
str. CI]
Length = 640
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKI----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|402309693|ref|ZP_10828676.1| DNA gyrase, B subunit [Eubacterium sp. AS15]
gi|400371189|gb|EJP24154.1| DNA gyrase, B subunit [Eubacterium sp. AS15]
Length = 640
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 321/649 (49%), Positives = 449/649 (69%), Gaps = 24/649 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V+ YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AGY N
Sbjct: 2 EEKVNIEYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGYCKN 61
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V++ +N I P+++HP T KS LETVLTVLHAGGKFG + GY VSGGLH
Sbjct: 62 IYVSIDVNNGITVIDDGRGIPVEIHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGLH 119
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALS+SL V +DG Y Q++ +G PV+ + HV+ + +GT I F PD
Sbjct: 120 GVGVSVVNALSKSLTAVVKKDGKIYKQEFEKGNPVSDV--HVVGDCPMEERGTCISFLPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+ VF + + + R+RELAFLN ++I L ED+ + +Y + GG+ EYV+
Sbjct: 178 ETVFEETV-YSFEVLEHRLRELAFLNKGISITL--EDNRTIEKVSRKYHYEGGIIEYVKA 234
Query: 301 LNTDKKPLHDVVGFRKDVDGIT--IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
LN +++ L +V+ F K + + I++A+Q+ +DAY + + +AN+I T++GG H+ G K
Sbjct: 235 LNKNREALTEVIYFNKLDEEFSYDIEIAMQY-TDAYVENIYSFANNINTVEGGMHLIGFK 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
++LTR +N +K+ +K+KD + +GE +REGLT IISV++P P++EGQTKT+LGNP++R
Sbjct: 294 SALTRVVNDYARKNNMLKEKDENFTGEDIREGLTAIISVKLPEPQYEGQTKTKLGNPQMR 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
V+Q + + +LE +P I+ K + + +A AAKRARDL R+K +L S+SLPGK
Sbjct: 354 SSVEQITVDQVATFLEENPATARIIMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC P +SEIFIVEGDSAGGSAK+GR+ + QAILPLRGKILNVE+ +++
Sbjct: 414 LADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAILPLRGKILNVEKARLDKALQSDT 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+N+I A G G+ G +F LRYHKIII++DADVDGAHIRTL+LTFF+RY + L ++G
Sbjct: 474 IKNMITAFGCGI-GSEFDDSKLRYHKIIIMSDADVDGAHIRTLILTFFFRYMRPLIEKGY 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
+Y+ PPL+ +E+GK+ Y Y EL+ K+ A+ S R KGLGEM +L +TT
Sbjct: 533 VYIAQPPLFSIEKGKKTYYAYSPEELEAKLNEIGRERAVVS--RNKGLGEMDAEELGDTT 590
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++P +R+L ++ +EDA A+ +F LMG +V+ R+E IQ NA + NLD
Sbjct: 591 MDPAKRVLLKVNLEDAIAADEIFDILMGDKVEPRREFIQKNAKYVENLD 639
>gi|325269651|ref|ZP_08136264.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
gi|324988019|gb|EGC19989.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
Length = 657
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/655 (48%), Positives = 436/655 (66%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV++
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVSIN 69
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSVTVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS ++ V+RDG Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 128 VNALSSHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWPDAGIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 304
+ F + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-FQWDIVARRMRELAYLNAGIKITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G + +LTR
Sbjct: 243 RQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRTALTR 301
Query: 364 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
TL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKAYADNDPQISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG 361
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V Q+V E L+ YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALSNYLEEHPNEAKLICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESV 481
Query: 540 QNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV+ E DF+ + LRY KIII+TDADVDG+HI TL++T FYRY +
Sbjct: 482 MNIIQSIGVRFGVEDEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVI 541
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
++G +Y+ PPLYK K +YCY D + L K + QR+KGLGEM P
Sbjct: 542 EQGHLYIATPPLYKCTYKKVSEYCYTDQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|30260200|ref|NP_842577.1| DNA gyrase subunit B [Bacillus anthracis str. Ames]
gi|47525259|ref|YP_016608.1| DNA gyrase subunit B [Bacillus anthracis str. 'Ames Ancestor']
gi|49183044|ref|YP_026296.1| DNA gyrase subunit B [Bacillus anthracis str. Sterne]
gi|49476686|ref|YP_034365.1| DNA gyrase subunit B [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65317473|ref|ZP_00390432.1| COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase
IV), B subunit [Bacillus anthracis str. A2012]
gi|165873014|ref|ZP_02217635.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488]
gi|167635023|ref|ZP_02393340.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442]
gi|167641730|ref|ZP_02399973.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193]
gi|170689461|ref|ZP_02880651.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465]
gi|170707498|ref|ZP_02897951.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389]
gi|177655278|ref|ZP_02936832.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174]
gi|190569295|ref|ZP_03022189.1| DNA gyrase, B subunit [Bacillus anthracis str. Tsiankovskii-I]
gi|196036134|ref|ZP_03103534.1| DNA gyrase, B subunit [Bacillus cereus W]
gi|196041949|ref|ZP_03109236.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99]
gi|196045551|ref|ZP_03112782.1| DNA gyrase, B subunit [Bacillus cereus 03BB108]
gi|206975909|ref|ZP_03236820.1| DNA gyrase, B subunit [Bacillus cereus H3081.97]
gi|217957586|ref|YP_002336128.1| DNA gyrase subunit B [Bacillus cereus AH187]
gi|218901211|ref|YP_002449045.1| DNA gyrase subunit B [Bacillus cereus AH820]
gi|227812683|ref|YP_002812692.1| DNA gyrase subunit B [Bacillus anthracis str. CDC 684]
gi|228918105|ref|ZP_04081633.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930499|ref|ZP_04093499.1| DNA gyrase subunit B [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931511|ref|ZP_04094421.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228949215|ref|ZP_04111483.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228988722|ref|ZP_04148807.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229124996|ref|ZP_04254170.1| DNA gyrase subunit B [Bacillus cereus 95/8201]
gi|229142242|ref|ZP_04270766.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26]
gi|229187722|ref|ZP_04314858.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1]
gi|229603398|ref|YP_002864662.1| DNA gyrase subunit B [Bacillus anthracis str. A0248]
gi|254687066|ref|ZP_05150924.1| DNA gyrase subunit B [Bacillus anthracis str. CNEVA-9066]
gi|254724151|ref|ZP_05185936.1| DNA gyrase subunit B [Bacillus anthracis str. A1055]
gi|254742123|ref|ZP_05199810.1| DNA gyrase subunit B [Bacillus anthracis str. Kruger B]
gi|254755967|ref|ZP_05207999.1| DNA gyrase subunit B [Bacillus anthracis str. Vollum]
gi|254761353|ref|ZP_05213375.1| DNA gyrase subunit B [Bacillus anthracis str. Australia 94]
gi|375282106|ref|YP_005102538.1| DNA gyrase subunit B [Bacillus cereus NC7401]
gi|376264036|ref|YP_005116748.1| DNA gyrase subunit B [Bacillus cereus F837/76]
gi|386733878|ref|YP_006207059.1| DNA gyrase subunit B [Bacillus anthracis str. H9401]
gi|421508143|ref|ZP_15955059.1| DNA gyrase subunit B [Bacillus anthracis str. UR-1]
gi|421640490|ref|ZP_16081073.1| DNA gyrase subunit B [Bacillus anthracis str. BF1]
gi|49066055|sp|Q9X3Y6.2|GYRB_BACAN RecName: Full=DNA gyrase subunit B
gi|30253521|gb|AAP24063.1| DNA gyrase, B subunit [Bacillus anthracis str. Ames]
gi|47500407|gb|AAT29083.1| DNA gyrase, B subunit [Bacillus anthracis str. 'Ames Ancestor']
gi|49176971|gb|AAT52347.1| DNA gyrase, B subunit [Bacillus anthracis str. Sterne]
gi|49328242|gb|AAT58888.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51988026|dbj|BAD44714.1| gyraseB [Bacillus anthracis]
gi|164711226|gb|EDR16782.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488]
gi|167510284|gb|EDR85687.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193]
gi|167529497|gb|EDR92247.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442]
gi|170127494|gb|EDS96368.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389]
gi|170666563|gb|EDT17336.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465]
gi|172080205|gb|EDT65297.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174]
gi|190559602|gb|EDV13593.1| DNA gyrase, B subunit [Bacillus anthracis str. Tsiankovskii-I]
gi|195991301|gb|EDX55269.1| DNA gyrase, B subunit [Bacillus cereus W]
gi|196023758|gb|EDX62434.1| DNA gyrase, B subunit [Bacillus cereus 03BB108]
gi|196027204|gb|EDX65824.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99]
gi|206746003|gb|EDZ57399.1| DNA gyrase, B subunit [Bacillus cereus H3081.97]
gi|217063046|gb|ACJ77296.1| DNA gyrase, B subunit [Bacillus cereus AH187]
gi|218537455|gb|ACK89853.1| DNA gyrase, B subunit [Bacillus cereus AH820]
gi|227004428|gb|ACP14171.1| DNA gyrase, B subunit [Bacillus anthracis str. CDC 684]
gi|228595790|gb|EEK53474.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1]
gi|228641260|gb|EEK97567.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26]
gi|228658497|gb|EEL14163.1| DNA gyrase subunit B [Bacillus cereus 95/8201]
gi|228771034|gb|EEM19515.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228810498|gb|EEM56851.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228828154|gb|EEM73878.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228829218|gb|EEM74855.1| DNA gyrase subunit B [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841585|gb|EEM86701.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229267806|gb|ACQ49443.1| DNA gyrase, B subunit [Bacillus anthracis str. A0248]
gi|358350626|dbj|BAL15798.1| DNA gyrase, B subunit [Bacillus cereus NC7401]
gi|364509836|gb|AEW53235.1| DNA gyrase subunit B [Bacillus cereus F837/76]
gi|384383730|gb|AFH81391.1| DNA gyrase subunit B [Bacillus anthracis str. H9401]
gi|401821946|gb|EJT21100.1| DNA gyrase subunit B [Bacillus anthracis str. UR-1]
gi|403392443|gb|EJY89696.1| DNA gyrase subunit B [Bacillus anthracis str. BF1]
Length = 640
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|190710553|gb|ACE95107.1| gyrase subunit B [Bacillus thuringiensis serovar kyushuensis]
Length = 627
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/635 (50%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V ++ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKVVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|310777811|ref|YP_003966144.1| DNA gyrase subunit B [Ilyobacter polytropus DSM 2926]
gi|309747134|gb|ADO81796.1| DNA gyrase subunit B [Ilyobacter polytropus DSM 2926]
Length = 634
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/642 (48%), Positives = 434/642 (67%), Gaps = 23/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y +E I VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDE+ AGY + IE+ +L
Sbjct: 3 NYQAENITVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSVDESLAGYCNKIEIKVL 62
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+ +HP KSALE VLTVLHAGGKF +S Y VSGGLHGVG+SV
Sbjct: 63 KDNIIEVSDNGRGIPVGIHPKHGKSALEIVLTVLHAGGKF--ENSNYKVSGGLHGVGVSV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE EV V RDG ++Q+Y+RG P V V + GT +RF D ++F T
Sbjct: 121 VNALSEWTEVFVKRDGKIHNQRYNRGVP----EFDVKVVGKTNETGTTVRFKADSEIFET 176
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+++D + + R++E+A+LN L I L D E+ + F GG+ ++++ + +
Sbjct: 177 -LEYDFDVLKSRLKEMAYLNKGLEIVLI--DERKEEIKEEILKFDGGIVDFIKEVEEGQA 233
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L + + + + I +++A+ + ++ +T+ + N+I T +GGTH+ G + +LTR +
Sbjct: 234 TLIPEPIYMAGESEDIIVEIAILY-TEKQRETIYSFVNNINTHEGGTHVSGFRMALTRII 292
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N + K +K++D + G+ +REG+T IIS++VP P+FEGQTKT+LGN EV VV +
Sbjct: 293 NEMAKSLGLLKERDGNFQGQDIREGVTAIISIKVPEPQFEGQTKTKLGNSEVTAVVSSIM 352
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
++L ++E HP +I+ + L + KA AAK+AR+LV +KS L SLPGKLADCSS
Sbjct: 353 GQFLKMHMEDHPSDARNIIERILMSRKAREAAKKARELVMRKSALEVGSLPGKLADCSSK 412
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
PEESE+FIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ +N E+++++ A
Sbjct: 413 KPEESEVFIVEGDSAGGSAKQGRDRHTQAILPLRGKIINVEKSGLHKALENNEVRSMVTA 472
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + G+D + E LRYHKIII+TDADVDGAHIRTL+LTFFYRY L G IY+ PP
Sbjct: 473 FGANI-GDDLELEKLRYHKIIIMTDADVDGAHIRTLILTFFYRYMVDLIHGGYIYIAQPP 531
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
L+KV G+ +QY Y D +LK++ + + N Y++QR+KGLGEM P QLWETT+N + R
Sbjct: 532 LFKVTAGRTIQYAYSDKQLKEITTVMDADNKRYTLQRYKGLGEMNPDQLWETTMNHDTRT 591
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ I+DA EA+++F LMG +V+ R+ I+ ++ V NLD
Sbjct: 592 LLQVTIDDAREADILFDKLMGDKVEPRRNFIEEHSHFVKNLD 633
>gi|289577274|ref|YP_003475901.1| DNA gyrase subunit beta [Thermoanaerobacter italicus Ab9]
gi|289526987|gb|ADD01339.1| DNA gyrase, B subunit [Thermoanaerobacter italicus Ab9]
Length = 633
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 444/643 (69%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G + Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVVVKQRGKIFRQTYERGVPKTELEIIG----ETEETGTTITFKPDKEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ F+++ +A R+RELAFLN + I L E D ++ +N + GG+ +V++LN +K
Sbjct: 179 ETV-FNYDVLAQRLRELAFLNKGINIRLIDE-RDGKEEVFN---YEGGIISFVKYLNRNK 233
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 234 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDTYTENIFSFANNIDTREGGTHLVGFKSALTK 291
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVIEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKTGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G++F LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+
Sbjct: 472 TALGTGI-GDEFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL ++ + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 531 PPLYKITKGKKVYYAYSDKELDRILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 TILKVTLEDAIAADEIFTILMGDKVEPRREFIERYAKTVRNLD 632
>gi|16802054|ref|NP_463539.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e]
gi|46906230|ref|YP_012619.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093016|ref|ZP_00230795.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858]
gi|47097288|ref|ZP_00234846.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854]
gi|226222645|ref|YP_002756752.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824774|ref|ZP_05229775.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194]
gi|254827430|ref|ZP_05232117.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254851836|ref|ZP_05241184.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503]
gi|254913117|ref|ZP_05263129.1| DNA gyrase subunit B [Listeria monocytogenes J2818]
gi|254930863|ref|ZP_05264222.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262]
gi|254937498|ref|ZP_05269195.1| DNA gyrase subunit B [Listeria monocytogenes F6900]
gi|254994017|ref|ZP_05276207.1| DNA gyrase subunit B [Listeria monocytogenes FSL J2-064]
gi|255520064|ref|ZP_05387301.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-175]
gi|284803260|ref|YP_003415125.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578]
gi|284996401|ref|YP_003418169.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923]
gi|300763380|ref|ZP_07073378.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017]
gi|386042353|ref|YP_005961158.1| DNA gyrase subunit B [Listeria monocytogenes 10403S]
gi|386045640|ref|YP_005963972.1| B subunit [Listeria monocytogenes J0161]
gi|386048936|ref|YP_005966927.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-561]
gi|386052279|ref|YP_005969837.1| DNA gyrase subunit B [Listeria monocytogenes Finland 1998]
gi|386730767|ref|YP_006204263.1| DNA gyrase subunit B [Listeria monocytogenes 07PF0776]
gi|404279558|ref|YP_006680456.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2755]
gi|404282436|ref|YP_006683333.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2372]
gi|404285373|ref|YP_006691959.1| DNA gyrase subunit B [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404409245|ref|YP_006694833.1| DNA gyrase subunit B [Listeria monocytogenes SLCC5850]
gi|404412112|ref|YP_006697699.1| DNA gyrase subunit B [Listeria monocytogenes SLCC7179]
gi|405748341|ref|YP_006671807.1| DNA gyrase subunit B [Listeria monocytogenes ATCC 19117]
gi|405751210|ref|YP_006674675.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2378]
gi|405754085|ref|YP_006677549.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2540]
gi|405756993|ref|YP_006686269.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2479]
gi|406702781|ref|YP_006753135.1| DNA gyrase, B subunit [Listeria monocytogenes L312]
gi|417314056|ref|ZP_12100762.1| DNA gyrase subunit B [Listeria monocytogenes J1816]
gi|424712856|ref|YP_007013571.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
LL195]
gi|424821659|ref|ZP_18246672.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A]
gi|21328234|gb|AAM48481.1|AF084042_1 DNA gyrase subunit B [Listeria monocytogenes]
gi|16409365|emb|CAC98221.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e]
gi|46879494|gb|AAT02796.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 4b str.
F2365]
gi|47014333|gb|EAL05308.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854]
gi|47018584|gb|EAL09338.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858]
gi|225875107|emb|CAS03795.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258599808|gb|EEW13133.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258605128|gb|EEW17736.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503]
gi|258610100|gb|EEW22708.1| DNA gyrase subunit B [Listeria monocytogenes F6900]
gi|284058822|gb|ADB69763.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578]
gi|284061868|gb|ADB72807.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923]
gi|293582408|gb|EFF94440.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262]
gi|293591119|gb|EFF99453.1| DNA gyrase subunit B [Listeria monocytogenes J2818]
gi|293594013|gb|EFG01774.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194]
gi|300515657|gb|EFK42706.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017]
gi|328468327|gb|EGF39333.1| DNA gyrase subunit B [Listeria monocytogenes J1816]
gi|332310339|gb|EGJ23434.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A]
gi|345532631|gb|AEO02072.1| B subunit [Listeria monocytogenes J0161]
gi|345535587|gb|AEO05027.1| DNA gyrase, B subunit [Listeria monocytogenes 10403S]
gi|346422782|gb|AEO24307.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-561]
gi|346644930|gb|AEO37555.1| DNA gyrase, B subunit [Listeria monocytogenes Finland 1998]
gi|384389525|gb|AFH78595.1| DNA gyrase subunit B [Listeria monocytogenes 07PF0776]
gi|404217541|emb|CBY68905.1| DNA gyrase, B subunit [Listeria monocytogenes ATCC 19117]
gi|404220410|emb|CBY71773.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2378]
gi|404223285|emb|CBY74647.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2540]
gi|404226193|emb|CBY47598.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2755]
gi|404229071|emb|CBY50475.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC5850]
gi|404231938|emb|CBY53341.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2372]
gi|404234875|emb|CBY56277.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2479]
gi|404237811|emb|CBY59212.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC7179]
gi|404244302|emb|CBY02527.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406359811|emb|CBY66084.1| DNA gyrase, B subunit [Listeria monocytogenes L312]
gi|424012040|emb|CCO62580.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
LL195]
gi|441469553|emb|CCQ19308.1| DNA gyrase subunit B [Listeria monocytogenes]
gi|441472685|emb|CCQ22439.1| DNA gyrase subunit B [Listeria monocytogenes N53-1]
Length = 646
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 432/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SLEV V R+G +Y+Q++ RG V + D +GT + F PD Q+FT
Sbjct: 134 NALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQ++Y Y D +L+ +S + YSIQR+KGLGEM P QLW+TT+NPE R L
Sbjct: 546 YQIKHGKQIEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ I+DA +A+ F LMG RV+ R++ I++ A V NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLD 645
>gi|42779086|ref|NP_976333.1| DNA gyrase subunit B [Bacillus cereus ATCC 10987]
gi|384177915|ref|YP_005563677.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402554403|ref|YP_006595674.1| DNA gyrase subunit B [Bacillus cereus FRI-35]
gi|42735001|gb|AAS38941.1| DNA gyrase, B subunit [Bacillus cereus ATCC 10987]
gi|324323999|gb|ADY19259.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401795613|gb|AFQ09472.1| DNA gyrase subunit B [Bacillus cereus FRI-35]
Length = 640
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|297543507|ref|YP_003675809.1| DNA gyrase subunit B [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841282|gb|ADH59798.1| DNA gyrase, B subunit [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 633
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 444/643 (69%), Gaps = 27/643 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE LEV V + G + Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVVVKQRGKIFRQTYERGVPKTDLEIIG----ETEETGTTITFKPDKEIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ F+++ +A R+RELAFLN + I L E D ++ +N + GG+ +V++LN +K
Sbjct: 179 ETV-FNYDVLAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGIISFVKYLNRNK 233
Query: 306 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ LH+ + K+ D +++ +Q+ +D Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 234 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDTYTENIFSFANNIDTREGGTHLVGFKSALTK 291
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVIEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGGSAK GR+ RFQAILPLRGKILNVE+ + NEEI+ +I
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKTGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G++F LRYHK++I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+
Sbjct: 472 TALGTGI-GDEFDISKLRYHKVVIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK+ +GK+V Y Y D EL ++ + Y++QR+KGLGEM QLW+TT++PE+R
Sbjct: 531 PPLYKITKGKKVYYAYSDKELDRILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ +EDA A+ +F+ LMG +V+ R+E I+ A V NLD
Sbjct: 590 TILKVTLEDAIAADEIFTILMGDKVEPRREFIERYAKTVRNLD 632
>gi|190710581|gb|ACE95121.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
Length = 627
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/635 (51%), Positives = 432/635 (68%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNSIQENA 625
>gi|306821823|ref|ZP_07455415.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550130|gb|EFM38129.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 649
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/648 (49%), Positives = 447/648 (68%), Gaps = 22/648 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V+ YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+ N
Sbjct: 11 EEKVNSEYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCKN 70
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V++ +N I P+++HP T KS LETVLTVLHAGGKFG + GY VSGGLH
Sbjct: 71 IYVSIDVNNGITVIDDGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGLH 128
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+SVVNALS+SL V +DG Y Q++ +G PV+ + HV+ + +GT I F PD
Sbjct: 129 GVGVSVVNALSKSLTAVVKKDGKIYKQEFEKGNPVSDV--HVVGDCPMEERGTCISFLPD 186
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
+ VF + + + R+RELAFLN ++I L ED+ + +Y + GG+ EYV+
Sbjct: 187 ETVFEETV-YSFEVLEHRLRELAFLNKGISITL--EDNRTIEKVTRKYHYEGGIIEYVKA 243
Query: 301 LNTDKKPLHDVVGFRKDVDGIT--IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
LN +++ L +V+ F K + + I++A+Q+ +DAY + + +AN+I T++GG H+ G K
Sbjct: 244 LNKNREALTEVIYFNKLDEEFSYDIEIAMQY-TDAYVENIYSFANNINTVEGGMHLIGFK 302
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
++LTR +N +K+ +K+KD + +GE +REGLT IISV++P P++EGQTKT+LGNP++R
Sbjct: 303 SALTRVVNDYARKNNMLKEKDENFTGEDIREGLTAIISVKLPEPQYEGQTKTKLGNPQMR 362
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
V+Q + + +LE +P I+ K + + +A AAKRARDL R+K +L S+SLPGK
Sbjct: 363 SSVEQITVDQVATFLEENPATARIIMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGK 422
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC P +SEIFIVEGDSAGGSAK+GR+ + QAILPLRGKILNVE+ +++
Sbjct: 423 LADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAILPLRGKILNVEKARLDKALQSDT 482
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+N+I A G G+ G +F LRYHKIII++DADVDGAHIRTL+LTFF+RY + L ++G
Sbjct: 483 IKNMITAFGCGI-GSEFDDSKLRYHKIIIMSDADVDGAHIRTLILTFFFRYMRPLIEKGY 541
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y+ PPL+ +E+GK+ Y Y EL + K + + R KGLGEM +L +TT+
Sbjct: 542 VYIAQPPLFSIEKGKKTYYAYSPEEL-EAKLNEIGRERTVVSRNKGLGEMDAEELGDTTM 600
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+P +R+L ++ +EDA A+ +F LMG +V+ R+E IQ NA + NLD
Sbjct: 601 DPAKRVLLKVNLEDAIAADEIFDILMGDKVEPRREFIQKNAKYVENLD 648
>gi|227485761|ref|ZP_03916077.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
gi|227236316|gb|EEI86331.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
Length = 642
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/646 (50%), Positives = 439/646 (67%), Gaps = 30/646 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + I+VLEGLE VR RP MYIGST RGLHHLVYE++DN+VDEA AG I+V
Sbjct: 12 NNNYDAGNIRVLEGLEPVRLRPGMYIGSTSSRGLHHLVYEVVDNSVDEALAGRCDYIKVT 71
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+ HP T+KS LETVLTVLHAGGKF S Y VSGGLHGVG+
Sbjct: 72 INKDNVVSVEDDGSGIPVKEHPTTHKSTLETVLTVLHAGGKF--DDSAYKVSGGLHGVGV 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L V RDG Y +++RG+ +T + + GT+I F PD ++F
Sbjct: 130 SVVNALSEYLIAEVKRDGHVYKMEFARGE----VTKDIEVIGDTTETGTKITFKPDGEIF 185
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T I F+ + + R RE+AFLN + I D +N + F GG+ E+V +LN +
Sbjct: 186 DTTI-FERSILENRFREMAFLNKGVEIRFE----DERENFETSFKFEGGISEFVSFLNRN 240
Query: 305 KKPLHDVV-GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K P+ +++ F +GI ++ A Q+ +D YS+ +L YAN+I+T +GGTH+ G+++SLTR
Sbjct: 241 KDPIMEMIPHFDGSQEGIEVEFAFQY-TDGYSENILSYANNIQTPEGGTHLSGLRSSLTR 299
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
++N +K +KD + +L GE +REG+T IISV++ +P+FEGQTK++LGN EVR VVD
Sbjct: 300 SVNDYARKYNFIKDNEENLQGEDIREGITAIISVKISDPQFEGQTKSKLGNSEVRGVVDS 359
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E+LT +LE +P SI+ K+L++ +A AA++ARDL R++S+L S++LPGKLADC
Sbjct: 360 YVSEHLTAFLEENPKPAKSIIDKALASRRAREAARKARDLTRKRSILDSATLPGKLADCQ 419
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
ST E+EIFIVEG+SAGGSAK GRD R QAILPLRGKI+NVE+ + +EEI+N+I
Sbjct: 420 STDISENEIFIVEGNSAGGSAKGGRDNRIQAILPLRGKIMNVEKAHLDKVLNSEEIKNMI 479
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G++F LRY KIII+TDADVDGAHIRTLLLTFFYRY K L DEG +YV +
Sbjct: 480 TAFGTGI-GKEFDISKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMKDLIDEGHVYVAL 538
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ +GK+ +Y Y D E K +A + I R+KGLGEM QLWETT++P++R
Sbjct: 539 PPLYRISQGKKERYVYSDDEKDKYIKEL-GDATFKINRYKGLGEMNAEQLWETTMDPDRR 597
Query: 664 MLKQLVIEDAAEANV---VFSSLMGARVDTRKELIQ-NAANLVNLD 705
+L L +E+ E+ FS LMG +V+ R+ IQ NA + ++D
Sbjct: 598 VL--LRVEEDLESTTTDDTFSLLMGEKVEPRRNFIQENAKYVTDID 641
>gi|190710547|gb|ACE95104.1| gyrase subunit B [Bacillus thuringiensis serovar alesti]
Length = 627
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/633 (50%), Positives = 431/633 (68%), Gaps = 21/633 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+++ +T+A R+RELAFLN + + + ED K Q E+ + GG++ YV+ LN K+P
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTI--EDKRGHK-QKKEFHYEGGIKSYVEHLNRSKQP 234
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N
Sbjct: 235 IHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVIN 293
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 294 DYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFS 353
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 354 EAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKD 413
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+
Sbjct: 414 PAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAI 473
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL
Sbjct: 474 GTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPL 532
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R L
Sbjct: 533 FKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLL 592
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 593 QVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|357043575|ref|ZP_09105266.1| DNA gyrase, B subunit [Prevotella histicola F0411]
gi|355368239|gb|EHG15660.1| DNA gyrase, B subunit [Prevotella histicola F0411]
Length = 658
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/655 (48%), Positives = 437/655 (66%), Gaps = 34/655 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTINE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSITVEDDGRGIPVDEHKKLHKSALEIVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS ++ V+RDG Y Q+Y +GKP+ + + D+ GTR +FWPD +FTT
Sbjct: 129 NALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----IGETDKTGTRQQFWPDGDIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDK 305
+ F + +A R+RELA+LN + I L DPE + E F A GL+E+V++++ +
Sbjct: 185 V-FQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHR 243
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRT
Sbjct: 244 QHLFDDVIYLKTEKQGIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRT 302
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 303 LKAYADNDPQISKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 362
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 363 VQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLA 422
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 423 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVM 482
Query: 541 NLIRALGL--GVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV+ + + EA LRY KIII+TDADVDG+HI TL++T FYRY +
Sbjct: 483 NIIQSIGVRFGVEESEGEFEANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVI 542
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
++G +Y+ PPLYK K +YCY + + L K + QR+KGLGEM P
Sbjct: 543 EQGHLYIATPPLYKCTFKKVSEYCYTEQQRQAFLDKYGNGTEDGKTIHTQRYKGLGEMNP 602
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R++ I+ A N+D
Sbjct: 603 EQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRRDFIEKNATYANID 657
>gi|229199683|ref|ZP_04326326.1| DNA gyrase subunit B [Bacillus cereus m1293]
gi|228583778|gb|EEK41953.1| DNA gyrase subunit B [Bacillus cereus m1293]
Length = 640
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPAQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|145577971|gb|ABP82704.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 435/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RD ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 122 NALSTELEVFVHRDRKIHYQKYERGIPAADLKV----IGETDRTGTITRFKPDSEIFTET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTSATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|217965929|ref|YP_002351607.1| DNA gyrase subunit B [Listeria monocytogenes HCC23]
gi|386006719|ref|YP_005924997.1| DNA gyrase subunit B [Listeria monocytogenes L99]
gi|386025294|ref|YP_005946070.1| DNA gyrase subunit B [Listeria monocytogenes M7]
gi|217335199|gb|ACK40993.1| DNA gyrase, B subunit [Listeria monocytogenes HCC23]
gi|307569529|emb|CAR82708.1| DNA gyrase, B subunit [Listeria monocytogenes L99]
gi|336021875|gb|AEH91012.1| DNA gyrase subunit B [Listeria monocytogenes M7]
Length = 646
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/640 (51%), Positives = 431/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS SLEV V R+G +Y+Q++ RG V + D +GT + F PD Q+FT
Sbjct: 134 NALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQV+Y Y D +L+ +S + YSIQR+KGLGEM P QLW TT+NPE R L
Sbjct: 546 YQIKHGKQVEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWNTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ I+DA +A+ F LMG RV+ R++ I++ A V NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLD 645
>gi|345883105|ref|ZP_08834553.1| DNA gyrase, B subunit [Prevotella sp. C561]
gi|345044076|gb|EGW48124.1| DNA gyrase, B subunit [Prevotella sp. C561]
Length = 657
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/661 (47%), Positives = 442/661 (66%), Gaps = 34/661 (5%)
Query: 71 NPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
NP ++ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY N
Sbjct: 4 NPENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCHN 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + DNSI P+D+H +KSALE V+TVLHAGGKF S Y VSGGLH
Sbjct: 64 IEVTINEDNSITVEDDGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+S VNALS + V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD
Sbjct: 122 GVGVSCVNALSTHMMSQVFRNGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYV 298
+F+T + + + +A R+RELA+LN + I L DPE + E F A GL+E+V
Sbjct: 178 PDIFSTTV-YQWSIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFV 236
Query: 299 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++++ ++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G
Sbjct: 237 RYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGF 295
Query: 358 KASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
+A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LG
Sbjct: 296 RAALTRTLKAYADNDPQISKQLEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLG 355
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
N EV V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+
Sbjct: 356 NSEVAGAVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGG 415
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +
Sbjct: 416 GLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRV 475
Query: 534 YKNEEIQNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
++ E + N+I+++G+ GV+GE DF+ + LRY KIII+TDADVDG+HI TL++T FYR
Sbjct: 476 FEAESVMNIIQSIGVRFGVEGEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYR 535
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKG 644
Y + + G +Y+ PPLYK K +YCY + + + K + + QR+KG
Sbjct: 536 YMPKVIEHGHLYIATPPLYKCTYKKVSEYCYTEQQRQAFIDKYANGDEEDKAIHTQRYKG 595
Query: 645 LGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
LGEM P QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+
Sbjct: 596 LGEMNPEQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATYANI 655
Query: 705 D 705
D
Sbjct: 656 D 656
>gi|222093779|ref|YP_002527826.1| DNA gyrase subunit b [Bacillus cereus Q1]
gi|221237824|gb|ACM10534.1| DNA gyrase, B subunit [Bacillus cereus Q1]
Length = 640
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 436/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 10 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 70 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 128 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 183
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 184 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 238
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 239 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 297
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 298 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 357
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 418 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 477
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 478 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 536
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 537 PPLFKIQQGKKIQYAYNEKELEKILDELPAQPKPGIQRYKGLGEMNPAQLWETTMDPEVR 596
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 597 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|190710597|gb|ACE95129.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/635 (51%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG +QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIQYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|145577961|gb|ABP82699.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
gi|145578027|gb|ABP82732.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar poloniensis]
Length = 632
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|145577967|gb|ABP82702.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
cereus]
Length = 632
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 435/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGTQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKVLSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|190710569|gb|ACE95115.1| gyrase subunit B [Bacillus thuringiensis serovar alesti]
Length = 627
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/635 (50%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++T LHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTALHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|374628575|ref|ZP_09700960.1| DNA gyrase, B subunit [Methanoplanus limicola DSM 2279]
gi|373906688|gb|EHQ34792.1| DNA gyrase, B subunit [Methanoplanus limicola DSM 2279]
Length = 639
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/644 (50%), Positives = 431/644 (66%), Gaps = 24/644 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + I VLEGL+ VR+RPAMYIGST RGLHHL+YE++DNAVDEA AG +NI V +
Sbjct: 5 NYNASNITVLEGLDPVRERPAMYIGSTDTRGLHHLIYEVVDNAVDEALAGICNNISVTIN 64
Query: 136 ADNS---------IPID-LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
D S IP+D + KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 RDGSCTVSDDGRGIPVDIMDDQEGKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V V RDG + + RG V L+ V S GT+I F PD +F
Sbjct: 123 VVNALSTFLNVEVHRDGYIHEMGFERGLVVNPLSSRVNASSSGPEHGTKITFMPDPLIFE 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T + FD++ ++ R+RELAFLN + I + E +D E + + + GGL+E+V L + K
Sbjct: 183 T-VTFDYDVLSHRMRELAFLNSGIRIEIADERNDFE----DVFHYEGGLKEFVNHLISGK 237
Query: 306 KPLHDVVGFRKDVD---GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +H V + D + +++ALQ+ S AYS+T+L + NS+ T +GGTH+EG+K++LT
Sbjct: 238 EAIHKDVIYLHTFDEPNKVEVEVALQYSS-AYSETILTFVNSVNTREGGTHLEGLKSALT 296
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N K + +K L GE VREGL +IS+++ P+FEGQTK RLGN V+ +VD
Sbjct: 297 RAINKTAKDNNLLKGISTPLRGEDVREGLNTVISIKIAEPQFEGQTKMRLGNSNVKGIVD 356
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V + LTEY E +P V+ I+ K+L A KA AA++AR+L R+KS L S LPGKLADC
Sbjct: 357 SLVYQSLTEYFEENPKVIQIIVQKALGAAKAREAARKARELARRKSTLESGGLPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P +SE++IVEGDSAGGSAKQGR R FQAILPLRGKILNVE+ + KN EIQ L
Sbjct: 417 SERDPAKSEVYIVEGDSAGGSAKQGRSRLFQAILPLRGKILNVEKASPHKILKNTEIQAL 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G GV GE F E RYH II++TDADVDGAHI TLLLTFFYRY L ++G IY+
Sbjct: 477 ISAIGCGV-GESFNVEKARYHHIILMTDADVDGAHICTLLLTFFYRYMPDLIEKGYIYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ +GK +Y + + E++ + + + SIQR+KGLGEM QLWETT+NPE
Sbjct: 536 QPPLYRIAKGKMEKYAFKEEEMRAAIAEYGEKGV-SIQRYKGLGEMNAEQLWETTMNPET 594
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
R+LKQ+ + DA A+ +FS LMG VD R+E +I++A + NLD
Sbjct: 595 RVLKQVDVMDATYADEIFSKLMGDDVDARREFIIRHAKEVTNLD 638
>gi|289596495|ref|YP_003483191.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|289534282|gb|ADD08629.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 644
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 441/657 (67%), Gaps = 45/657 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LE +AVRKRP MYIGST RGLHHL+YE++DN++DEA AGY S I V +
Sbjct: 4 YDAKAIQILEDAQAVRKRPGMYIGSTDERGLHHLIYEVVDNSIDEALAGYCSRINVIIHK 63
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE V+TVLHAG KF Y ++GGLHGVG+ VV
Sbjct: 64 DGSVSVEDDGRGIPVDMHPEKGKSALEVVMTVLHAGAKF--DKKAYRITGGLHGVGIHVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPV------------DSKDRQ---- 231
N LSE L+ + RDG Y Q Y RGKP C V V D D +
Sbjct: 122 NFLSEWLKAYIKRDGKIYFQWYERGKP----QCDVHVVGKIENGNFVWIEDGHDEKFKYS 177
Query: 232 -GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF 290
GT IRF PD ++F T +F ++ + ++R+LAFLN + I L E S ++ + +
Sbjct: 178 RGTYIRFKPDAEIFETT-EFKYSIVKKKLRDLAFLNRGIEITLEDERSGKKE----VFKY 232
Query: 291 AGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG+ E+V++LN P+H DVV + + DGI ++ A+Q+ +D+ S+ +L + N+I T++
Sbjct: 233 DGGIVEFVKFLNEGYNPIHRDVVYGKDEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVE 291
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH+ G +++LT+ +N K +K D SL GE VREGLT +I V+ PNP+FEGQTK
Sbjct: 292 GGTHVSGFRSALTKVINDFAKSRNLLKGID-SLQGEDVREGLTAVIHVKHPNPQFEGQTK 350
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
+LGN EV+ VV V + L+ Y E HPDV +I+SK+++A +A +AA++AR+L R+K
Sbjct: 351 AKLGNSEVKGVVFSIVNKILSTYFEEHPDVATNIVSKAIAAARARIAARKARELARRKGY 410
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L S LPGKLADCS PE +E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+
Sbjct: 411 LESLDLPGKLADCSEEDPERAELFIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKAR 470
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
++KN EI+ LI A+G GV+ EDF LRY KIII+TDADVDGAHIRTLLLTFFYRY
Sbjct: 471 IDKVFKNNEIRALISAIGTGVR-EDFDYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRY 529
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
L ++G IY+ PLY++++GK + Y Y D E ++ NA S+QRFKGLGEM
Sbjct: 530 MPELIEKGHIYIAQAPLYRIQKGKNIYYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMN 586
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
P QLW+TT+NPE R L ++ IEDAAEA+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 587 PQQLWDTTMNPETRRLIRVTIEDAAEADRLFSILMGEQVGPRREFIIQHAKEVMNID 643
>gi|190710561|gb|ACE95111.1| gyrase subunit B [Bacillus thuringiensis serovar novosibirsk]
Length = 627
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/635 (50%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLL FFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLMFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|190710609|gb|ACE95135.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/635 (50%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+ T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNTHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|254166743|ref|ZP_04873597.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|197624353|gb|EDY36914.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 648
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 331/657 (50%), Positives = 441/657 (67%), Gaps = 45/657 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LE +AVRKRP MYIGST RGLHHL+YE++DN++DEA AGY S I V +
Sbjct: 8 YDAKAIQILEDAQAVRKRPGMYIGSTDERGLHHLIYEVVDNSIDEALAGYCSRINVIIHK 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE V+TVLHAG KF Y ++GGLHGVG+ VV
Sbjct: 68 DGSVSVEDDGRGIPVDMHPEKGKSALEVVMTVLHAGAKF--DKKAYRITGGLHGVGIHVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPV------------DSKDRQ---- 231
N LSE L+ + RDG Y Q Y RGKP C V V D D +
Sbjct: 126 NFLSEWLKAYIKRDGKIYFQWYERGKP----QCDVHVVGKIENGNFVWIEDGHDEKFKYS 181
Query: 232 -GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF 290
GT IRF PD ++F T +F ++ + ++R+LAFLN + I L E S ++ + +
Sbjct: 182 RGTYIRFKPDAEIFETT-EFKYSIVKKKLRDLAFLNRGIEITLEDERSGKKE----VFKY 236
Query: 291 AGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GG+ E+V++LN P+H DVV + + DGI ++ A+Q+ +D+ S+ +L + N+I T++
Sbjct: 237 DGGIVEFVKFLNEGYNPIHRDVVYGKDEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVE 295
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH+ G +++LT+ +N K +K D SL GE VREGLT +I V+ PNP+FEGQTK
Sbjct: 296 GGTHVSGFRSALTKVINDFAKSRNLLKGID-SLQGEDVREGLTAVIHVKHPNPQFEGQTK 354
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
+LGN EV+ VV V + L+ Y E HPDV +I+SK+++A +A +AA++AR+L R+K
Sbjct: 355 AKLGNSEVKGVVFSIVNKILSTYFEEHPDVATNIVSKAIAAARARIAARKARELARRKGY 414
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L S LPGKLADCS PE +E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+
Sbjct: 415 LESLDLPGKLADCSEEDPERAELFIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKAR 474
Query: 530 EAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
++KN EI+ LI A+G GV+ EDF LRY KIII+TDADVDGAHIRTLLLTFFYRY
Sbjct: 475 IDKVFKNNEIRALISAIGTGVR-EDFDYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRY 533
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
L ++G IY+ PLY++++GK + Y Y D E ++ NA S+QRFKGLGEM
Sbjct: 534 MPELIEKGHIYIAQAPLYRIQKGKNIYYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMN 590
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
P QLW+TT+NPE R L ++ IEDAAEA+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 591 PQQLWDTTMNPETRRLIRVTIEDAAEADRLFSILMGEQVGPRREFIIQHAKEVMNID 647
>gi|152973859|ref|YP_001373376.1| DNA gyrase subunit B [Bacillus cytotoxicus NVH 391-98]
gi|152022611|gb|ABS20381.1| DNA gyrase, B subunit [Bacillus cytotoxicus NVH 391-98]
Length = 640
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/645 (50%), Positives = 437/645 (67%), Gaps = 26/645 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V
Sbjct: 8 ANSYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVV 67
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+SI P+ + + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 68 IEEDDSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 125
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LEV V R+G ++QKY RG PV L + DR GT RF PD ++F
Sbjct: 126 SVVNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGETDRTGTVTRFKPDPEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+D + +A R+RELAFLN KLTI ++E+ Q E+ + GG++ YV+ LN
Sbjct: 182 KETTVYDFDILATRMRELAFLNRNIKLTIEDKRENK-----QKKEFHYEGGIKSYVEHLN 236
Query: 303 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +L
Sbjct: 237 RSKQPIHEEPVYVEGAKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTAL 295
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R +
Sbjct: 296 TRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTIT 355
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLAD
Sbjct: 356 ESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLAD 415
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++
Sbjct: 416 CSSKDPSISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRT 475
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A+G + G DF RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G +Y+
Sbjct: 476 IITAIGTNIGG-DFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYI 534
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPL+KV++GK++QY Y++ EL+++ + P+ SIQR+KGLGEM P QLWETT++PE
Sbjct: 535 AQPPLFKVQQGKKIQYAYNEKELERILAELPAQPKPSIQRYKGLGEMNPAQLWETTMDPE 594
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 595 VRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 639
>gi|73661314|ref|YP_300095.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72493829|dbj|BAE17150.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 641
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/642 (50%), Positives = 428/642 (66%), Gaps = 18/642 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TEDYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYADTIEVV 66
Query: 134 LLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DN IP+ + + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LEV V++D YHQ Y +G P V+ D GT IRF D ++F
Sbjct: 125 SVVNALSEDLEVYVYKDRKVYHQGYKKGVP--QFDLKVIEETDDDNTGTVIRFKADSEIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T + + T+ R RELAFLN ++I LR D E+ + + Y + GG++ YV+ LN +
Sbjct: 183 TETTTYHYETLQQRTRELAFLNKGISITLR--DERGEEVREDTYHYEGGIKSYVEMLNEN 240
Query: 305 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PLH+ + + D I +++ALQ+ + ++ +L YAN+I T +GGTH EG K +L+R
Sbjct: 241 KQPLHEEPIYVHQTKDDIEVEIALQY-NKGFATNLLTYANNIHTYEGGTHEEGFKRALSR 299
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LNS G SK +K+ LSGE REGLT I+S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 300 VLNSYGLNSKIIKEDKERLSGEDTREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQIVDK 359
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E +L HP V ++ K + A A LAAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 360 LFSELFERFLYEHPQVGRIVVEKGIMASHARLAAKKAREVTRRKSALEISSLPGKLADCS 419
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEIFIVEGDSAGGS K GRD QAILPLRGKILNVE+ + N EI+++I
Sbjct: 420 SKDPSRSEIFIVEGDSAGGSTKSGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMI 479
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ GE F RYHKI+++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 480 TAFGTGIGGE-FDLSKARYHKIVLMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQ 538
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+ +GKQ Y +++ EL+K+K+ +SI R+KGLGEM QLWETT+NPE R
Sbjct: 539 PPLFKLTQGKQKYYVFNERELEKLKAELEPTPKWSISRYKGLGEMNADQLWETTMNPENR 598
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ ++DA EA+ VF LMG V+ R++ I++ A NLD
Sbjct: 599 AMLQVSLDDAIEADQVFEMLMGDVVENRRQFIEDNAVYANLD 640
>gi|421186532|ref|ZP_15643923.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
gi|399966874|gb|EJO01375.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
Length = 652
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 312/641 (48%), Positives = 424/641 (66%), Gaps = 20/641 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNSYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITITDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGA 132
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ ++V V+RD Y+ + RG T + P+ K +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDNKIYYMDFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIF 190
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I FD+ T+A RIRELAFLN L +++ + DP KN+ + + GG+ EYV++LN +
Sbjct: 191 RETIVFDYRTLASRIRELAFLNKGLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKN 248
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PL + V + +GI +++ALQ+ +DA ++T++ + N+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTR 307
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK +KD D LSGE VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+
Sbjct: 308 IINDYAKKKGILKDSDDPLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNH 367
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ +P+ +I +K L A KA +AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGLIASKARVAAKKARDLTRKKSGLEISALAGKLADNT 427
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NEEI++L
Sbjct: 428 SRDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKATLDKVLANEEIRSLF 487
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GE+F YHK+II+TDADVDGAHIRTLLLT F+RY + L D G IY+
Sbjct: 488 TAMGTGF-GEEFDISKAHYHKVIIMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYIYIAQ 546
Query: 604 PPLYKVERGKQVQYCY--DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY V G Q Y D EL + ++ P++ IQR+KGLGEM VQLW+TT++P+
Sbjct: 547 PPLYGVAIGNSDQRVYLDSDEELDQYTATLPASPKPRIQRYKGLGEMDAVQLWDTTMDPK 606
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
R L ++ E E + F LMG RV+ R+E I++ A V
Sbjct: 607 HRRLLRVDPEYQPEVDTTFDMLMGDRVEPRREFIEDNAQFV 647
>gi|55377342|ref|YP_135192.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|448640227|ref|ZP_21677281.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
gi|55230067|gb|AAV45486.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|445762017|gb|EMA13251.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
Length = 642
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/638 (49%), Positives = 432/638 (67%), Gaps = 26/638 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V + + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLKPDEETGTTVRFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T +F +T++ R+RELAFLN + I++ D E++ E F + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI-----DDERDGETETFAYDGGIREFVEYLNE 235
Query: 304 DKKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 236 TKDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFK 294
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 TSLTRVINDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 354
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGK
Sbjct: 355 GIVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGK 414
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N E
Sbjct: 415 LADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNE 474
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+NLI ALG G+ G++F E LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G
Sbjct: 475 IRNLITALGTGI-GDEFDIEDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGY 533
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY++ DAE ++ +QRFKGLGEM P QLWETT+
Sbjct: 534 VYASQPPLYRIRYRGNTYDAMTDAERDQIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTM 593
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
NP+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 594 NPDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|448309739|ref|ZP_21499594.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
gi|445589405|gb|ELY43638.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
Length = 640
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/635 (49%), Positives = 431/635 (67%), Gaps = 21/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHD 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + + G+PV + V +D + GT IRFWPD +F
Sbjct: 125 NALSSRLEVEVKRDGGVFEHAFEAGEPVGDME-RVRDMDPDEGTGTAIRFWPDTDIFE-G 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSD-PEKNQYNEYFFAGGLEEYVQWLNTDK 305
F +T++ R+RELAFLN + I LR E D D P K Y + GG+ E+V++LN +
Sbjct: 183 DDFAFSTLSNRLRELAFLNSGVRITLRDERDEDGPAKETYE---YQGGIREFVEYLNETR 239
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+H D++ F D I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 240 SAMHEDIIYFEDDDQNIEVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 299 VNDYAGENDLLNDLDENLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 359 MHEGLGTYFEEHPDTAEAIITKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADCQT 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE++E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 419 KDPEKAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F + +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y P
Sbjct: 479 AIGAGI-GDEFDVDDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + DAE ++ +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 538 PLYRIRYRGETYDAMTDAERDEIVEEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPENRI 597
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 598 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKEHA 632
>gi|145577975|gb|ABP82706.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar entomocidus]
Length = 632
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 436/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E +RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKVRYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++ A EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQGAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|145578019|gb|ABP82728.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar tolworthi]
Length = 632
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 435/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDETNVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|448302921|ref|ZP_21492871.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
gi|445593928|gb|ELY48095.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
Length = 640
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/633 (49%), Positives = 432/633 (68%), Gaps = 17/633 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHD 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + + G+PV + V +D + GT IRFWPD +F T
Sbjct: 125 NALSSRLEVEVKRDGGVFEHAFESGEPVGDME-RVRDMDPDEGTGTTIRFWPDIDIFETG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F +T++ R+RELAFLN + I LR E ++ + Y + GG+ E+V++LN +
Sbjct: 184 -DFTFSTLSNRLRELAFLNSGVRITLRDERAEDGPTEET-YEYEGGIREFVEYLNETRSA 241
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H DV+ F D I +++A+Q ++ ++ +AN+I T +GG+H+ G K +LTRT+N
Sbjct: 242 MHEDVIYFEDDDQNIEVEVAMQ-ATEELQGSIHAFANNINTREGGSHLTGFKTALTRTVN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ + D + +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++
Sbjct: 301 DYAGENDLLGDLEENLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMH 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L Y E HPD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 EGLGTYFEEHPDTAEAIITKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKD 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE++E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+
Sbjct: 421 PEKAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAI 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPL
Sbjct: 481 GAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V + +AE ++ +QRFKGLGEM P QLWETT+NP+ R+LK
Sbjct: 540 YRVRYRGETYDAMTEAERDEIIEQKCDGNPTRVQRFKGLGEMNPEQLWETTMNPDNRILK 599
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
Q+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 600 QITIEDAAAADKMFSVLMGDAVEPRKQFIKEHA 632
>gi|313674412|ref|YP_004052408.1| DNA gyrase subunit b [Marivirga tractuosa DSM 4126]
gi|312941110|gb|ADR20300.1| DNA gyrase subunit B [Marivirga tractuosa DSM 4126]
Length = 653
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/652 (48%), Positives = 435/652 (66%), Gaps = 28/652 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + I VLEGLEAVRKRPAMYIG G +GLHH+++E++DN++DEA AG+ + I V
Sbjct: 9 NKDYSAGNITVLEGLEAVRKRPAMYIGDVGVKGLHHMIWEVVDNSIDEAMAGHCTTITVE 68
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS IP+D+H +SALE V+TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 69 INEDNSVTVMDDGRGIPVDIHEKEGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGVGV 126
Query: 185 SVVNALSESLEVTVW-RDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
S VNALS L+ TV+ RDG Y Q+YS G P V PV D GT+I+F PD +
Sbjct: 127 SCVNALSTMLKATVYSRDGKIYEQEYSEGFPKEP----VKPVGETDVTGTKIQFKPDASI 182
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWL 301
F +F + T+A R+RELA+LN + I L+ D D + E FF+ GGL E+V++L
Sbjct: 183 FMET-EFKYETVASRLRELAYLNAGIKIKLQDHRDKDENGDSKEENFFSEGGLLEFVEYL 241
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
+ ++ L + + +G+ + +AL + + +YS+ ++ Y N+I TI+GGTH+ G + +
Sbjct: 242 DVSREKLIPQPIYMEGEKNGVPVQVALNYNT-SYSENVVSYVNNINTIEGGTHVSGFRRA 300
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTRTL S KS ++ + I ++G+ REGLT IISV+V P+FEGQTKT+LGN +V
Sbjct: 301 LTRTLKSYADKSGLLEKQKIEITGDDFREGLTAIISVKVAEPQFEGQTKTKLGNSDVMGA 360
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ V E L +LE +P +I+ K + A +A AAK+AR++V++K+V+ S LPGKLA
Sbjct: 361 VESCVSETLQYFLEENPKAAKTIVQKVILAAQARNAAKKAREMVQRKNVMSGSGLPGKLA 420
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P E+++VEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ E +Y N+EI+
Sbjct: 421 DCSEKDPSICELYLVEGDSAGGSAKQGRDRNFQAILPLKGKILNVEKAQEHKIYDNDEIK 480
Query: 541 NLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
N++ ALG+ ED +K E LRYHKI+I+TDADVDG+HIRTL+LT F+RY + L D
Sbjct: 481 NILTALGVRFGTEDDEKALNLEKLRYHKIVIMTDADVDGSHIRTLILTLFFRYMRELIDM 540
Query: 597 GCIYVGVPPLYKVERGKQVQYCY-DDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQL 653
G +Y+ PPLY ++RGK +Y + +D ++ VK P + +QR+KGLGEM P QL
Sbjct: 541 GYVYIAQPPLYLIKRGKTERYVFTEDERVEVVKEISPDGTEGAVHLQRYKGLGEMNPEQL 600
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
W TT++P R +KQ+ +E AAEA+ +FS LMG V R++ I+ A +D
Sbjct: 601 WTTTMDPHTRKMKQVSVESAAEADHLFSMLMGDEVPPRRDFIEKNAKYAKID 652
>gi|421526684|ref|ZP_15973291.1| DNA gyrase subunit B [Fusobacterium nucleatum ChDC F128]
gi|402257241|gb|EJU07716.1| DNA gyrase subunit B [Fusobacterium nucleatum ChDC F128]
Length = 635
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 320/646 (49%), Positives = 432/646 (66%), Gaps = 29/646 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G+ ++QKY RGKP + ++ +D GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKTGVIHYQKYHRGKPEEDV--KIIGSCGEDEHGTIVRFKADGEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-- 304
I +++ T++ R++ELA+LN LTI L D E+ + Y F GG+ +++ + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITL--SDLRKEEKKEEVYKFDGGILDFLNEIVKDDT 234
Query: 305 ---KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+KP + + D + +D+ + + + ++ + + N+I T +GGTH++G + +L
Sbjct: 235 TIIEKPFY----VSAEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTAL 289
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ +N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V
Sbjct: 290 TKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIV 349
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLAD
Sbjct: 350 NTIVSNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLAD 409
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C+S EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+
Sbjct: 410 CTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRA 469
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
++ A G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY K L EG IY+
Sbjct: 470 MVTAFGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYI 528
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP
Sbjct: 529 ACPPLYKVSSGKQIIYAYNDLELKNVLGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNP 588
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R+L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 589 DGRLLLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|284165545|ref|YP_003403824.1| DNA gyrase B subunit [Haloterrigena turkmenica DSM 5511]
gi|284015200|gb|ADB61151.1| DNA gyrase, B subunit [Haloterrigena turkmenica DSM 5511]
Length = 644
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/636 (49%), Positives = 434/636 (68%), Gaps = 19/636 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIND 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++ + GT+IRFWPD +F +
Sbjct: 125 NALSERLEAEVKRDGSVFRHAFEAGEPVGDME-RVRDMEPDEETGTQIRFWPDTGIFESG 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTD 304
+F +T++ R+RELAFLN + I LR E + + Y + GG+ E+V++LN
Sbjct: 184 -EFSFSTLSNRLRELAFLNSGVHITLRDEREEATEGDDLVEETYEYQGGIREFVEYLNET 242
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHDDVIYFEAEEQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N K + + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYAKDNDMLGDLEDNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
S+ E L Y E HPD +I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 SMHEGLGTYFEEHPDTAQAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 TKDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 482 TAIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ + +AE ++ + +QRFKGLGEM P QLW+TT++P+ R
Sbjct: 541 PPLYRIRYRGETYDAMTEAERDEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 ILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDNA 636
>gi|443242346|ref|YP_007375571.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
gi|442799745|gb|AGC75550.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
Length = 645
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/646 (47%), Positives = 430/646 (66%), Gaps = 25/646 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++QIQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+ NI V +
Sbjct: 8 NYGADQIQALEGMEHVRMRPSMYIGDVGIRGLHHLVYEVVDNSIDEALAGHCDNITVIIN 67
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+H SAL+ V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 68 KDNSITVTDDGRGIPVDIHKKEGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSC 125
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ L+ TV+RDG + Q+Y RGK + V + D++GT + F PD+ +F
Sbjct: 126 VNALSDHLKATVYRDGKIWEQEYERGKAMYP----VRAIGDTDKRGTDVTFTPDRSIFKQ 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 304
I++++ T+A R+REL+FLN + I L D E N E F + GL+E++++L+
Sbjct: 182 TIEYNYETLANRLRELSFLNKGIKIILTDARHQDEEGNNITEVFQSEEGLKEFIRFLDDT 241
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ P+ DV+ + +GI +++A+ + +D+YS+ + Y N+I T +GGTH+ G + LT
Sbjct: 242 RSPIIEDVIAMEGEKNGIPVEVAMIY-NDSYSENLHSYVNNINTHEGGTHLAGFRRGLTS 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL S + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV V Q
Sbjct: 301 TLKKYADGSGLLDKLKFDVSGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQ 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V + L +YLE HP+ +I+ K + A A AA++AR++V++K+V+ LPGKL+DCS
Sbjct: 361 AVSQMLEDYLEEHPNDAKTIVQKVILAATARHAARKAREMVQRKTVMSGGGLPGKLSDCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
T P E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+
Sbjct: 421 ETDPTLCEVFLVEGDSAGGTAKQGRDREFQAILPLRGKILNVEKAMQHKVFENEEIRNIY 480
Query: 544 RALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ K + LRYHKI+I+ DAD+DG+HI TL+LTFF+RY K L + G I
Sbjct: 481 TALGVTIGTEEDSKALNLDKLRYHKIVIMCDADIDGSHIATLILTFFFRYMKELVEAGYI 540
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLY V++G + +Y + D E ++ +F A +IQR+KGLGEM QLW+TT+N
Sbjct: 541 YIATPPLYLVKKGAKKRYAWSDKERDEIADNFGGGA--AIQRYKGLGEMNADQLWDTTMN 598
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
PE R L+Q+ IE AEA+ VFS LMG V R+E I+ A N+D
Sbjct: 599 PEFRTLRQISIESPAEADRVFSMLMGDEVPPRREFIEKNAIYANID 644
>gi|418574795|ref|ZP_13138957.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379326701|gb|EHY93817.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 644
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/650 (50%), Positives = 431/650 (66%), Gaps = 18/650 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
EA + ++ YG+ QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG
Sbjct: 2 EAVSDVNNTEDYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAG 61
Query: 126 YASNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
YA IEV + DN IP+ + + A+E +LTVLHAGGKFGG S
Sbjct: 62 YADTIEVVIEKDNWIKVTDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG 121
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
LHGVG SVVNALSE LEV V++D YHQ Y +G P V+ D GT IR
Sbjct: 122 --LHGVGSSVVNALSEDLEVYVYKDRKVYHQGYKKGVP--QFDLKVIEETDDDNTGTVIR 177
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F D ++FT + + T+ R RELAFLN ++I LR D E+ + + Y + GG++
Sbjct: 178 FKADPEIFTETTTYHYETLQQRTRELAFLNKGISITLR--DERGEEVREDTYHYEGGIKS 235
Query: 297 YVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
YV+ LN +K+PLH+ + + D I +++ALQ+ + ++ +L YAN+I T +GGTH E
Sbjct: 236 YVEMLNENKEPLHEEPIYVHQTKDEIEVEIALQY-NKGFATNLLTYANNIHTYEGGTHEE 294
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G K +L+R LNS G SK +K+ LSGE REGLT I+S++ +P+FEGQTKT+LGN
Sbjct: 295 GFKRALSRVLNSYGLNSKIIKEDKERLSGEDTREGLTAIVSIKHGDPQFEGQTKTKLGNS 354
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EVR++VD+ E +L HP V ++ K + A A LAAK+AR++ R+KS L SSL
Sbjct: 355 EVRQIVDKLFSELFERFLYEHPQVGRIVVEKGIMASHARLAAKKAREVTRRKSALEISSL 414
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCSS P SEIFIVEGDSAGGS K GRD QAILPLRGKILNVE+ +
Sbjct: 415 PGKLADCSSKDPSRSEIFIVEGDSAGGSTKSGRDSETQAILPLRGKILNVEKARLDRILN 474
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N EI+++I A G G+ GE F RYHKI+++TDADVDGAHIRTLLLTFFYR+ + L +
Sbjct: 475 NNEIRSMITAFGTGIGGE-FDLSKARYHKIVLMTDADVDGAHIRTLLLTFFYRFMRPLLE 533
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G +Y+ PPL+K+ +GKQ Y +++ EL+K+K+ +SI R+KGLGEM QLWE
Sbjct: 534 AGYVYIAQPPLFKLTQGKQKYYVFNERELEKLKAELEPTPKWSISRYKGLGEMNADQLWE 593
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R + Q+ ++DA EA+ VF LMG V+ R++ I++ A NLD
Sbjct: 594 TTMNPENRAMLQVSLDDAIEADQVFEMLMGDVVENRRQFIEDNAVYANLD 643
>gi|145577985|gb|ABP82711.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar thompsoni]
Length = 632
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 435/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++L + ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLSY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|336397547|ref|ZP_08578347.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
gi|336067283|gb|EGN55917.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
Length = 657
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/656 (47%), Positives = 438/656 (66%), Gaps = 35/656 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN +DEA AGY + +EV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNCIDEAMAGYCTEVEVTIN 69
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D S IP+D H +KSALE V+TVLHAGGKF +S Y VSGGLHGVG+S
Sbjct: 70 TDGSCTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKNS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS ++ V+RDG Y Q+Y +GKP+ V + D++GTR +FWPD +FTT
Sbjct: 128 VNALSTRMKSQVYRDGHIYQQEYEKGKPLYP----VKMIGDTDKRGTRQQFWPDPTIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 304
F + +A R+RELA+LN + I L DPE + + F GL+E+V++++
Sbjct: 184 TT-FQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRQEVFHAKDGLKEFVRYIDRH 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 243 RQHLFDDVIYLKTEKQGVPIEVAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRMALTR 301
Query: 364 TLNSLGKKS----KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+ + K ++ I ++ E REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 VMKNYADNDPQIRKQIEKAKIEVASEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG 361
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+Q+V E LT YLE HPD I K + A A +AA++AR+ V++KSV+ S LPGKL
Sbjct: 362 AVNQAVGEALTNYLEEHPDEAHKICEKVILAATARIAARKARESVQRKSVMGGSGLPGKL 421
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 ADCSNRDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESV 481
Query: 540 QNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV GED ++ + LRY KIII+TDADVDG+HI TL++T F+R+ +
Sbjct: 482 MNIIQSIGVRFGVDGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFFRFMPKVI 541
Query: 595 DEGCIYVGVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMM 649
+EG +Y+ PPLYK + K QYCY+D + L K + ++++ QR+KGLGEM
Sbjct: 542 EEGHLYIATPPLYKCTFKSKISQYCYNDQQRQAFLDKYGNGQEGTSIHT-QRYKGLGEMN 600
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT++P+ R+LKQ+ IE+AAEA+ +FS LMG V+ R+E I++ A N+D
Sbjct: 601 PEQLWETTMDPKTRLLKQVTIENAAEADEIFSMLMGDDVEPRREFIEDNAAYANID 656
>gi|118587497|ref|ZP_01544922.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
gi|71466856|emb|CAH41002.1| DNA gyrase subunit B [Oenococcus oeni]
gi|118432147|gb|EAV38888.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
Length = 652
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 312/641 (48%), Positives = 424/641 (66%), Gaps = 20/641 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNSYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITITDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGA 132
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ ++V V+RD Y+ + RG T + P+ K +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDNKIYYMDFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIF 190
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I FD+ T+A RIRELAFLN L +++ + DP KN+ + + GG+ EYV++LN +
Sbjct: 191 RETIVFDYRTLASRIRELAFLNKGLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKN 248
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PL + V + +GI +++ALQ+ +DA ++T++ + N+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTR 307
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK +KD D LSGE VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+
Sbjct: 308 IINDYVKKKGILKDSDDPLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNH 367
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ +P+ +I +K L A KA +AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGLIASKARVAAKKARDLTRKKSGLEISALAGKLADNT 427
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NEEI++L
Sbjct: 428 SRDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKATLDKVLANEEIRSLF 487
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GE+F YHK+II+TDADVDGAHIRTLLLT F+RY + L D G IY+
Sbjct: 488 TAMGTGF-GEEFDISKAHYHKVIIMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYIYIAQ 546
Query: 604 PPLYKVERGKQVQYCY--DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY V G Q Y D EL + ++ P++ IQR+KGLGEM VQLW+TT++P+
Sbjct: 547 PPLYGVAIGNSDQRVYLDSDEELDQYTATLPASPKPRIQRYKGLGEMDAVQLWDTTMDPK 606
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
R L ++ E E + F LMG RV+ R+E I++ A V
Sbjct: 607 HRRLLRVDPEYQPEVDTTFDMLMGDRVEPRREFIEDNAQFV 647
>gi|145577993|gb|ABP82715.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar alesti]
Length = 632
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 433/642 (67%), Gaps = 26/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSILVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRD FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDCHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLL TFFYRY + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLFTFFYRYMGQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ A V NLD
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKFVKNLD 632
>gi|282163382|ref|YP_003355767.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
gi|282155696|dbj|BAI60784.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
Length = 635
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/643 (48%), Positives = 438/643 (68%), Gaps = 26/643 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AGY NIEV
Sbjct: 7 AQAYDASSIQVLEGLEAVRKRPSMYIGSTDYRGLHHLVYEVVDNSIDEALAGYCHNIEVT 66
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+++H + ALE V+T+LHAGGKF + Y VSGGLHGVG+
Sbjct: 67 INKDGSVTVSDDGRGIPVEMHEKYKRPALEIVMTMLHAGGKFDNLT--YKVSGGLHGVGV 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE L V V R+ + Q+Y RGKP V + + GT F PD +F
Sbjct: 125 SVVNALSEWLRVEVRRNEKLWVQEYVRGKP----KDEVHEIGTAIGTGTTTIFKPDPTIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F + + R+RELAFLN + I L D + + + GG+ ++VQ+LN
Sbjct: 181 ETT-EFKYEILVNRLRELAFLNKGVKITL----MDARSGVSDTFHYEGGIVQFVQYLNEG 235
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K P+++ V+ F K D +++A+Q+ +D YS+ +L +AN+I T +GGTH+ G +++LTR
Sbjct: 236 KTPVNEKVIYFEKQKDTTDVEIAMQY-NDGYSEIVLAFANNIHTTEGGTHLSGFRSALTR 294
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+ N KK+ +K D+ SGE +REGLT IISV++ NP+FEGQTKT+LGN +V+ +V+
Sbjct: 295 SFNDYAKKNSLLKG-DMQFSGEDIREGLTAIISVKLTNPQFEGQTKTKLGNSDVQGIVNS 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L ++LE +P I+ K++ A +A AA++AR+L R+KSVL +++LPGKLADCS
Sbjct: 354 LVGEGLDDFLEENPSEARKIIDKAVQAFQAREAARKARELTRRKSVLENTTLPGKLADCS 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+++VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ + +EEI+ LI
Sbjct: 414 ERDPSKCELYLVEGDSAGGSAKQGRNRLFQAILPLRGKILNVEKARLDRVLTSEEIRALI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G V GEDF + RYHKII++TDADVDGAHIRTLLLTFF+RY K L + G +Y+
Sbjct: 474 TAMGTSV-GEDFVIDKARYHKIILMTDADVDGAHIRTLLLTFFFRYMKPLIEAGYVYIAQ 532
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL++ ++GK+ +Y Y++ L + N + ++ R+KGLGEM P QLW TT++P+ R
Sbjct: 533 PPLFRAKKGKEERYAYNEEALAGILEEMGRNGV-AVNRYKGLGEMNPEQLWSTTMDPQTR 591
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ Q+ +EDA EA+ F+ LMG +V+ R++ I QNA + NLD
Sbjct: 592 TVLQVTMEDAVEADRTFTLLMGDKVEPRRDFIVQNAKFVRNLD 634
>gi|150014898|ref|YP_001307152.1| DNA gyrase subunit B [Clostridium beijerinckii NCIMB 8052]
gi|149901363|gb|ABR32196.1| DNA gyrase, B subunit [Clostridium beijerinckii NCIMB 8052]
Length = 635
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 333/644 (51%), Positives = 445/644 (69%), Gaps = 26/644 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY + IEV
Sbjct: 5 NRKYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCNKIEVY 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP KS +E ++T+LHAGGKFGG S LHGVG
Sbjct: 65 INEDNSITVNDDGRGMPVGIHPKMGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE VTV RDG + QKYS+GK + LT V D+ GT+ F PD ++F
Sbjct: 123 SVVNALSEECTVTVNRDGHIWQQKYSKGKVLNELT----KVGDSDQTGTQTYFKPDAEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
I FD ++ R+RELAFLN + I L D EK + + + GG++ +V +LN +
Sbjct: 179 D-EIVFDFEILSQRLRELAFLNKGIYIRLV--DKRDEKEEV--FHYEGGIKSFVSYLNRN 233
Query: 305 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K PLH+ + + V D I++++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR
Sbjct: 234 KVPLHEEPIYIEGVKDNISVEVALQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTR 292
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N KK +K+ D + +G+ +REGLT +IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 293 VFNDYAKKFGHIKENDKNFTGDDIREGLTGVISIKIEEPQFEGQTKTKLGNSEVRGIVDS 352
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E + +LE +P++ I+ K+L A +A AA++AR+L R KSVL S+LPGKLADCS
Sbjct: 353 IVGENIGIFLEENPNIGKMIVDKALMAARARDAARKARELTR-KSVLERSTLPGKLADCS 411
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P E EI+IVEGDSAGGSAKQGR+R+FQAILPLRGKILNVE++ + + I+++I
Sbjct: 412 SKDPRECEIYIVEGDSAGGSAKQGRNRKFQAILPLRGKILNVEKQRLDRILNADTIRSMI 471
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G DF E +RY++III+TDADVDGAHIRTLLLTFFYRY + L D+G +Y+
Sbjct: 472 TAFGAGI-GNDFDVEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRNLIDDGHVYIAQ 530
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV + K+ Y Y D EL+ V S + IQR+KGLGEM QLW+TT++PE+
Sbjct: 531 PPLYKVSKSKKEYYAYSDPELESVLSELGGKDNSTDIQRYKGLGEMNASQLWDTTMDPEK 590
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R+L ++ IEDA A+ +F+ LMG +V+ RKE I QNA N+VNLD
Sbjct: 591 RILLKVNIEDAMAADEIFTILMGEKVEPRKEFIQQNARNVVNLD 634
>gi|190710557|gb|ACE95109.1| gyrase subunit B [Bacillus thuringiensis serovar londrina]
gi|190710571|gb|ACE95116.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710573|gb|ACE95117.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710579|gb|ACE95120.1| gyrase subunit B [Bacillus thuringiensis serovar canadensis]
gi|190710583|gb|ACE95122.1| gyrase subunit B [Bacillus thuringiensis serovar jegathesan]
gi|190710585|gb|ACE95123.1| gyrase subunit B [Bacillus thuringiensis serovar yosoo]
gi|190710593|gb|ACE95127.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710599|gb|ACE95130.1| gyrase subunit B [Bacillus thuringiensis serovar yunnanensis]
gi|190710603|gb|ACE95132.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
gi|190710607|gb|ACE95134.1| gyrase subunit B [Bacillus thuringiensis serovar kumamotoensis]
gi|190710613|gb|ACE95137.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/635 (50%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|338214332|ref|YP_004658393.1| DNA gyrase subunit B [Runella slithyformis DSM 19594]
gi|336308159|gb|AEI51261.1| DNA gyrase, B subunit [Runella slithyformis DSM 19594]
Length = 656
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/650 (49%), Positives = 443/650 (68%), Gaps = 30/650 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y +E IQVLEGLEAVRKRPAMYIG G +GLHHL++E++DN++DEA AGY IEV +
Sbjct: 16 NYSAENIQVLEGLEAVRKRPAMYIGDIGVKGLHHLIWEVVDNSIDEALAGYCDRIEVVIN 75
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP +HP KSALE V+TVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 76 TDNSVTVKDNGRGIPTGMHPKEKKSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSC 133
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ L V V R+G + Q+YS GKP+ V + S D GT + F PD +FTT
Sbjct: 134 VNALSKHLRVEVHREGKIFEQEYSIGKPLYP----VRAIGSADDTGTFVHFLPDDSIFTT 189
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ--YNEYFFAGGLEEYVQWLNTD 304
+ ++ + T+A RIREL+FLN +T+ L E Q Y E+ GGL E+V +L++
Sbjct: 190 S-EYKYETVANRIRELSFLNKGITLTLTDLRDLDESGQPRYEEFHSQGGLVEFVTYLDST 248
Query: 305 KKPLHDVVGFRKDVDGIT-IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ L + ++ G+ +++A+ + + +YS+ ++ Y N+I TI+GGTH+ G + +LTR
Sbjct: 249 RDHLIPTPIYMENEKGVVPVEVAMIYNT-SYSENVVSYVNNINTIEGGTHVSGFRMALTR 307
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + KS + + I +SG+ REGLT +ISV+V P+FEGQTKT+LGN +V V Q
Sbjct: 308 TLKNYADKSGILAKEKIEISGDDFREGLTAVISVKVQEPQFEGQTKTKLGNSDVAGAVSQ 367
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L +L+ +P +I+ K + A KA +AA++AR++V++K+VL + LPGKLADCS
Sbjct: 368 VVSEMLDNFLQENPKEARTIVDKVILAAKARIAARKAREMVQRKTVLGGTGLPGKLADCS 427
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
T P E+++VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+I
Sbjct: 428 ETDPAGCELYLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAQEYKIYENEEIKNMI 487
Query: 544 RALGLGVKGEDFKKEA-----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
ALG+ V G+D + A LRYHK+II+TDADVDG+HIRTL+LTFF+RY K L D G
Sbjct: 488 TALGV-VFGKDGDERALNMDKLRYHKVIIMTDADVDGSHIRTLILTFFFRYMKDLIDSGF 546
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS---NALYSIQRFKGLGEMMPVQLWE 655
+Y+ PPLY V++GK+ +YC+ +A+ ++ +++Y IQR+KGLGEM P QLWE
Sbjct: 547 VYIAQPPLYLVKKGKEERYCWTEAQREQAVMEIAGGKEDSVY-IQRYKGLGEMNPEQLWE 605
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT++P +R LKQ+ IE AAEA+ +FS LMG V R+E I+ A +D
Sbjct: 606 TTMDPSRRSLKQVSIESAAEADHLFSMLMGDEVAPRREFIERNAKYARVD 655
>gi|320537025|ref|ZP_08037004.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
gi|320146100|gb|EFW37737.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
Length = 638
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/646 (49%), Positives = 438/646 (67%), Gaps = 25/646 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ TY + I VLEGLEAVRKRP MYIGSTGP GLHHLVYE++DN +DEA AG+ I V
Sbjct: 3 NSTYSASNITVLEGLEAVRKRPGMYIGSTGPNGLHHLVYEVVDNCIDEAMAGFCDRITVV 62
Query: 134 L-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L + DN IP+D+HP SALE VLT LHAGGKF S Y VSGGLHGVG+
Sbjct: 63 LEKNDIVRVEDNGRGIPVDIHPQEGISALEIVLTKLHAGGKFDKGS--YKVSGGLHGVGV 120
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS +E TV++DG E++QK+ G P+ + V + + D+ GT IR+ D +F
Sbjct: 121 SVVNALSTWMEATVYKDGAEHYQKFEIGVPLDS----VKKISTTDKHGTTIRWAADPAIF 176
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNT 303
+D + +A R+RELAFLN +TI +R E S P++ + F GG+ +VQ+L+
Sbjct: 177 KETTTYDFDVLATRLRELAFLNSNITIVMRDERLSTPKEATFA---FEGGISHFVQYLHG 233
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ L + + + + I +++ALQ+ +D Y++ +L + N I T +GGTH+EG K++LT
Sbjct: 234 TKQVLPAEPIYIEAEKNDIIMEIALQY-NDGYNENLLSFVNDINTREGGTHLEGFKSALT 292
Query: 363 RTLNS-LGKKSKTVK--DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
R +N L K SK +K DK+ L+GE VR GLT +IS++VP P+FEGQTKT+LGN +VR
Sbjct: 293 RVMNEFLKKNSKLIKKLDKEEKLTGEDVRAGLTAVISIKVPEPQFEGQTKTKLGNSDVRG 352
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LT + E +P ++D IL K++S A +AA+RA++ R+KS L S LPGKL
Sbjct: 353 IVDSFVNEKLTLFFEQNPAIIDKILEKTVSEATARIAARRAKEATRRKSGLDSFGLPGKL 412
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS P+ E++IVEGDSAGGSAK+GRD + QAILPL GK+LNVE+ + NE++
Sbjct: 413 ADCSLKDPKLCEVYIVEGDSAGGSAKKGRDSKTQAILPLWGKMLNVEKTRIDKVMNNEKL 472
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
Q +I +LG G+ G+DF + +RYHKIII+ DADVDG+HIRTLLLTFF+RY + +EG +
Sbjct: 473 QPIIASLGTGI-GKDFNIDKIRYHKIIIMADADVDGSHIRTLLLTFFFRYMPQIIEEGYV 531
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ +PPLYK+ K+ Y Y+D E +V ++QR+KGLGEM QLWETT++
Sbjct: 532 YLAMPPLYKISYNKKEWYVYNDEERDQVLKEIGKENNVAVQRYKGLGEMDGTQLWETTMD 591
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P +R + ++ + DA EA+ +FS+LMG V+ R++ I+ A NLD
Sbjct: 592 PARRKMMRVTLPDAIEADRIFSTLMGEEVEPRRQFIEENAVYANLD 637
>gi|340753204|ref|ZP_08689995.1| DNA gyrase, B subunit [Fusobacterium sp. 2_1_31]
gi|422315493|ref|ZP_16396925.1| DNA gyrase, B subunit [Fusobacterium periodonticum D10]
gi|340567084|gb|EEO39091.2| DNA gyrase, B subunit [Fusobacterium sp. 2_1_31]
gi|404592370|gb|EKA94208.1| DNA gyrase, B subunit [Fusobacterium periodonticum D10]
Length = 635
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 430/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G Y+QKY RGKP + ++ GT +RF D +F T
Sbjct: 120 VNALSEWLEVEVRKEGNVYYQKYHRGKPEEDV--KIIGSCEASEHGTTVRFKADGDIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + ++
Sbjct: 178 LV-YNYFTLSNRLKELAYLNRGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEET 234
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ D + + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 235 TIIDKPFYVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 293
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 353
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P + ++ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPAITKIVVEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 473
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY K L EG IY+ PP
Sbjct: 474 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPP 532
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK + + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 533 LYKVASGKQIIYAYNDLELKNILAQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 593 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|354605087|ref|ZP_09023076.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
gi|353347666|gb|EHB91942.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
Length = 652
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 310/655 (47%), Positives = 436/655 (66%), Gaps = 28/655 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E + + Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY SN
Sbjct: 6 EKMIEEEYSASSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDEALAGYCSN 65
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
IEV + DNSI P D H KSALE VLTVLHAGGKF S Y VSGGLH
Sbjct: 66 IEVYINEDNSITVEDDGRGIPTDFHEKEGKSALEVVLTVLHAGGKFDKDS--YKVSGGLH 123
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG+S VNALS L V R G + QK+S+G P+ + D GT I F PD
Sbjct: 124 GVGVSCVNALSNLLVAEVHRQGKVHVQKFSKGAPLGPMEI----TGETDSHGTIITFKPD 179
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
+F A ++++ ++ R+RELA+LN +L I ++E + + +E++ GL+E+V
Sbjct: 180 DSIFI-ATEYNYEILSSRLRELAYLNKGVRLNITDKREKDENGNYRRDEFYSTDGLKEFV 238
Query: 299 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
++L+ +++ L D + + DG+ +++A+Q+ + ++S+ + Y N+I TI+GGTH+ G
Sbjct: 239 KFLDENRESLIDNTIYIDTERDGVPVEVAMQYNT-SFSENVHSYVNNINTIEGGTHLTGF 297
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
+ +LTRTL + S + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 298 RRALTRTLKKYAEDSGMLSKVKFEINGDDFREGLTAVISVKVQEPQFEGQTKTKLGNSEV 357
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
VDQ++ LT YLE +P S+++K + A A AA++AR++V++K+VL S LPG
Sbjct: 358 SGAVDQAITTALTHYLEENPKDARSVVNKVILAATARHAARKAREMVQRKTVLSGSGLPG 417
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS +++EIF VEGDSAGG+AKQGRDR FQAI+PLRGKILNVE+ + +++NE
Sbjct: 418 KLADCSSRDRDKTEIFFVEGDSAGGTAKQGRDRTFQAIMPLRGKILNVEKAMKHRVWENE 477
Query: 538 EIQNLIRALGLGVKG-------EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQ 590
EI N+ +ALG+ G ++ E LRY K+II+TDADVDG+HI TL+LTFF+R+
Sbjct: 478 EISNMFKALGIVPGGDNNADDEQEVSLEKLRYGKVIIMTDADVDGSHIATLMLTFFFRHM 537
Query: 591 KTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMP 650
+L G +Y+ PPLY V++GK +YC+ + E + + + S + +QR+KGLGEM
Sbjct: 538 NSLIQNGHVYIATPPLYLVKKGKNSRYCWTEEEREATLAEYGSKGAH-VQRYKGLGEMNA 596
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++PE R+L+Q+ IE AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 597 HQLWETTMSPETRILRQVTIESAAEADRIFSMLMGDDVPPRREFIERHAKYANID 651
>gi|448627574|ref|ZP_21672040.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
gi|445758882|gb|EMA10178.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
Length = 642
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/637 (49%), Positives = 430/637 (67%), Gaps = 24/637 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI----IDERDGETETFAYDGGIREFVEYLNET 236
Query: 305 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVINDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N EI
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+NLI ALG G+ G++F E LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G +
Sbjct: 476 RNLITALGTGI-GDEFDIEDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYV 534
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y PPLY++ DAE ++ +QRFKGLGEM P QLWETT+N
Sbjct: 535 YASQPPLYRIRYRGNTYDAMTDAERDRIIEEKCDGNPTQVQRFKGLGEMNPDQLWETTMN 594
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
P+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 595 PDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|257388769|ref|YP_003178542.1| DNA gyrase subunit beta [Halomicrobium mukohataei DSM 12286]
gi|257171076|gb|ACV48835.1| DNA gyrase, B subunit [Halomicrobium mukohataei DSM 12286]
Length = 641
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/638 (49%), Positives = 443/638 (69%), Gaps = 26/638 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+EQIQVLEGL+AV+KRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V
Sbjct: 4 DRDYGAEQIQVLEGLQAVQKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVT 63
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D+S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 64 IHEDDSVSVSDDGRGIPVDTHEKHDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGVGV 121
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ G+P L V ++ + GT+IRFWPD ++F
Sbjct: 122 SVVNALSKWLEVEVKRDGAVWKQRFDHGEPEDELE-RVRDMEPDEETGTQIRFWPDDEIF 180
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNT 303
A F ++T+A R+RELAFLN + I+L E D D E + + GG++E+VQ+LN
Sbjct: 181 E-ATDFVYSTLASRLRELAFLNSGVEISLVDERDGDSET-----FVYEGGIKEFVQYLNE 234
Query: 304 DKKPLH-DVVGFRKDV---DG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
K+PLH DV+ F + DG + +++A+Q ++ ++ +AN+I T +GG+H+ G K
Sbjct: 235 TKEPLHRDVIYFEDEEQIEDGPVQVEIAMQGTAELQG-SIHAFANNINTREGGSHMTGFK 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRT+N + + D D +LSGE +REGLT +IS++ P+P+FEGQTKT+LGN EVR
Sbjct: 294 TALTRTVNDYATSNGLLNDLDDTLSGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVR 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+V+ ++ + L + E +PD ++I+ K++ A KA AAK+A +L R+KS L S++LPGK
Sbjct: 354 GIVESAMHDGLGTFFEENPDTAEAIVGKAVEAAKARKAAKKAEELTRRKSALESTALPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
L+DC + P+++E+F+VEGDSAGGSAKQGR+ FQAILP+RGKILNVER + +N+
Sbjct: 414 LSDCQTRDPDDAELFVVEGDSAGGSAKQGRNPEFQAILPIRGKILNVERHRLDRILENDS 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+N+I ALG G+ G++F E +RY +II++TDADVDGAHIRTLLLT FYR+ K L + G
Sbjct: 474 IRNVITALGTGI-GDEFDVEDIRYKRIIMMTDADVDGAHIRTLLLTLFYRHMKPLLEAGY 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY+V + +AE ++ +QRFKGLGEM P QLW+TT+
Sbjct: 533 VYAAQPPLYRVRYNGETYDAMTEAERDRLVEEKCGGDPDQVQRFKGLGEMNPQQLWDTTM 592
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
+P+QR+LKQ+ IEDAA A+ +FS LMG V+ RKE I+
Sbjct: 593 DPDQRILKQITIEDAAAADKMFSVLMGDAVEPRKEFIK 630
>gi|145218835|ref|YP_001129544.1| DNA gyrase subunit B [Chlorobium phaeovibrioides DSM 265]
gi|145204999|gb|ABP36042.1| DNA gyrase subunit B [Chlorobium phaeovibrioides DSM 265]
Length = 642
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/652 (48%), Positives = 429/652 (65%), Gaps = 32/652 (4%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
EA + P YG+ IQVL+G+ VR RPAMYIG RGLHHL+YEI+DN++DE G
Sbjct: 3 EADIQTPTPTNYGATNIQVLDGIAHVRMRPAMYIGDIHSRGLHHLIYEIVDNSIDETLGG 62
Query: 126 YASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
Y I V+L D S IP+D+HP KSALE V+T++ AGGKF Y VS
Sbjct: 63 YNDYIFVSLNPDGSVTVIDHGRGIPVDIHPDKKKSALELVMTLIGAGGKF--DKGAYKVS 120
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVG SVVNALSE EV V+RDG + Q+Y RG P V + + +GT+
Sbjct: 121 GGLHGVGASVVNALSEWCEVEVYRDGKAWFQRYHRGVP----EGDVKEIGATSERGTKTT 176
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F +F + I R+RELAFLN L I ++ + + E + F GGL+E
Sbjct: 177 FMPDPEIFKVT-EFRKDIIIDRMRELAFLNSNLKIVVQDIEGEQET-----FHFEGGLKE 230
Query: 297 YVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
+V + LN K+P++ + G + D +++ALQ+ +D+Y + + Y N+I T +GG
Sbjct: 231 FVLFTDANRLNLIKEPVY-IYGEK---DSTIVEIALQY-NDSYQENVFSYVNNINTHEGG 285
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
TH+ G + +LTRTLNS +K+ +K+ ++L+G+ +EGLT +ISV+V P+FEGQTKT+
Sbjct: 286 THVTGFRKALTRTLNSYAQKNDLLKNLKLALTGDDFKEGLTAVISVKVAEPQFEGQTKTK 345
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN E + +V+ + E L+++ E +P+V+ I+ K A + AA++A++L R+KSVL
Sbjct: 346 LGNSETQSIVESVLNEQLSDFAESNPNVIKMIIEKVKGAAMSREAARKAKELTRRKSVLE 405
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
SS LPGKLADCS PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+
Sbjct: 406 SSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLH 465
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+ +NEEI+ +I ALG E+F +E LRY KIII+TDADVDGAHIRTLLLTFF+R+ +
Sbjct: 466 KLLENEEIKTIILALGTNFGEEEFSQEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRHMR 525
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMP 650
+L + G +Y+ PPLY V+ GK QY +DD E + A IQR+KGLGEM P
Sbjct: 526 SLIEAGKVYIAQPPLYLVKAGKDQQYAWDDEERNSIADMMRKGKANVHIQRYKGLGEMNP 585
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
QLW TT++PE R L Q+ +E+A EA+ VFS+LMG +V+ R+E I+ A V
Sbjct: 586 EQLWSTTMDPEHRSLLQVSVENAMEADKVFSTLMGDKVEPRREFIEKNARYV 637
>gi|383625257|ref|ZP_09949663.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|448700123|ref|ZP_21699344.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|445780025|gb|EMA30936.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
Length = 644
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 312/636 (49%), Positives = 434/636 (68%), Gaps = 19/636 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DRSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG Y + G+PV + V ++S + GT IRFWPD+ +F A
Sbjct: 125 NALSERLEAEVKRDGGVYRHAFEAGEPVGDME-RVRDMESDEETGTEIRFWPDESIFE-A 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
F +T++ R+RELAFLN + I+LR +E +D E Y + GG+ E+V++LN
Sbjct: 183 DDFSFSTLSNRLRELAFLNSGVRISLRDEREEAADAEGIIEETYEYEGGIREFVEYLNET 242
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +H+ V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHEEVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N ++ + D D +L GE +REGLT ++S++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYANENDLLGDLDENLKGEDIREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ E L Y E +PD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 AMHEGLGTYFEENPDTAEAIINKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ P E+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 TKDPGEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 482 TAIGAGI-GDEFDLEDVRYEKIIMATDADVDGAHIRTLLLTFFYRHMRPLLENGYVYATQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ + E ++ + + +QRFKGLGEM P QLW+TT++PE R
Sbjct: 541 PPLYRIRYRGDTYDAMTEQERDEIIEEKCNGSPSQVQRFKGLGEMNPQQLWDTTMDPENR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 601 ILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKENA 636
>gi|190710559|gb|ACE95110.1| gyrase subunit B [Bacillus thuringiensis serovar nigeriensis]
Length = 627
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/635 (50%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADEAFEILMGDKVEPRRNFIQENA 625
>gi|194335198|ref|YP_002016992.1| DNA gyrase subunit B [Pelodictyon phaeoclathratiforme BU-1]
gi|194307675|gb|ACF42375.1| DNA gyrase, B subunit [Pelodictyon phaeoclathratiforme BU-1]
Length = 649
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 320/650 (49%), Positives = 426/650 (65%), Gaps = 37/650 (5%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P +YG+ IQVL+G+E VR RPAMYIG RGLHHLVYEI+DN++DE G+ I
Sbjct: 13 PTEASYGATNIQVLDGIEHVRMRPAMYIGDIYSRGLHHLVYEIVDNSIDETLGGFNDYIF 72
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V+L D S IP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGV
Sbjct: 73 VSLNPDGSVTVIDHGRGIPVDIHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGV 130
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G SVVNALSE EV V RDG Y Q++ RG P V + S D +GT+ F PD
Sbjct: 131 GASVVNALSEWCEVEVSRDGKLYFQRFERGVP----QGDVKVIGSSDHRGTKTTFLPDHL 186
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQW- 300
+F T + + I R+RELAFLN +L+I ++ + + E F + GG++E+VQ+
Sbjct: 187 IFKTT-ELRKDIIIDRMRELAFLNKELSITVQDTEG------FQEIFHYEGGIKEFVQFT 239
Query: 301 ----LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
LN K+P++ + G R D +++ALQ+ +D Y + + Y N+I T +GGTH+ G
Sbjct: 240 DQNRLNLLKEPIY-LYGER---DSTIVEIALQY-NDTYQENVFSYVNNINTHEGGTHVTG 294
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ +LTRTLN+ +K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 295 FRKALTRTLNAYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSE 354
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
+ +V+ + E L+E+ E +P+VL I+ K A + AA+RA++L R+KSVL SS LP
Sbjct: 355 TQSIVETVINEQLSEFAESNPNVLKMIIEKVKGAAMSREAARRAKELTRRKSVLESSGLP 414
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +N
Sbjct: 415 GKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLEN 474
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EEI+ +I ALG E+F E LRY KIII+TDADVDGAHIRTLLLTFF+RY + L +
Sbjct: 475 EEIKTIILALGTSFGEEEFSVEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRALIEA 534
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKV----KSSFPSNALYSIQRFKGLGEMMPVQ 652
G +++ PPLY V+ GK QY +DD E + K A IQR+KGLGEM P Q
Sbjct: 535 GRVFIAQPPLYLVKSGKDQQYAWDDEERNSISDGMKKMQKGKANIHIQRYKGLGEMNPEQ 594
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
LW TT++P R L + +E+A EA+ VFS+LMG +V+ R+E I+ A V
Sbjct: 595 LWSTTMDPAHRSLLLVNVENAMEADQVFSTLMGDKVEPRREFIEKNARYV 644
>gi|397772628|ref|YP_006540174.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
gi|397681721|gb|AFO56098.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
Length = 642
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/635 (49%), Positives = 434/635 (68%), Gaps = 19/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG+ + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDEEPGTEIRFWPDTDIFETG 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDAGDPVTETYEYDGGIREFVNYLNETR 241
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDDNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMIT 480
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y P
Sbjct: 481 AIGAGI-GDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP 539
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++ + +AE + + +QRFKGLGEM P QLWETT+NP+ R+
Sbjct: 540 PLYRIRYRGETYDAMTEAERDAIVAEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRI 599
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 600 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 634
>gi|414082107|ref|YP_006990804.1| DNA gyrase subunit B [Carnobacterium maltaromaticum LMA28]
gi|412995680|emb|CCO09489.1| DNA gyrase, B subunit [Carnobacterium maltaromaticum LMA28]
Length = 645
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/646 (49%), Positives = 432/646 (66%), Gaps = 21/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ +++ Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+AS I
Sbjct: 9 DALAQEYDASQIQVLEGLEAVRKRPGMYIGSTSGQGLHHLVWEIVDNSIDEALAGFASEI 68
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
V + DNSI PI + T + A+ETV TVLHAGGKFGG S LHG
Sbjct: 69 NVIIEEDNSITVIDDGRGIPIGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHG 126
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V +DG ++QK+ +GK L + DRQGT + F PD
Sbjct: 127 VGSSVVNALSTILEVMVHKDGKIHYQKFHQGKVGEDLKI----IGDTDRQGTTVHFVPDP 182
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++FT F+ ++ R+RELAFLN L I++ ED + E+ + GG++ YV+ L
Sbjct: 183 EIFTETTVFEFEKLSTRVRELAFLNKGLKISI--EDKREGQETLKEFHYEGGIKSYVEHL 240
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N +K L D + + GI ++ A+Q+ +D Y +L +AN+I T +GGTH G K +
Sbjct: 241 NHNKTVLFEDPIYIEGEQQGIVVEAAMQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTA 299
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N +KSK +K+ + +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN E R +
Sbjct: 300 LTRVINDYARKSKLMKENEENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEARTI 359
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D+ + ++L +P V ++ K + A KA LAAKRAR++ R+KS L S+LPGKLA
Sbjct: 360 TDRLFSAHFDKFLMENPQVARRVIEKGILASKARLAAKRAREVTRKKSGLEISNLPGKLA 419
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P SEIFIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI+
Sbjct: 420 DCSSKDPSISEIFIVEGDSAGGSAKQGRSRLFQAILPIRGKILNVEKATLDKILANEEIR 479
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y
Sbjct: 480 SLFTAMGTGFGG-DFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVY 538
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLY+V +GK++ Y DAEL+ + P+ IQR+KGLGEM QLW TT++P
Sbjct: 539 IAQPPLYQVRQGKKMVYLDSDAELEAYLNEIPAQPKPVIQRYKGLGEMDAEQLWSTTMDP 598
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
E+R + Q+ ++DA EA+ VF LMG RV+ R++ I +NA + NLD
Sbjct: 599 ERRRMLQVTVDDAIEADQVFEMLMGDRVEPRRKFIEENAVYVQNLD 644
>gi|260591755|ref|ZP_05857213.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
gi|260536039|gb|EEX18656.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
Length = 657
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/655 (47%), Positives = 435/655 (66%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y +GKP+ + V + GTR +FWPD +FTT
Sbjct: 128 VNALSTHMMSQVYRDGKIYQQEYEKGKPLYPVKV----VGETQKTGTRQQFWPDPTIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 304
+ + + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-YQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTR
Sbjct: 243 RQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTR 301
Query: 364 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
TL S SK ++ I ++GE REGLT +I+++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKSYADNDPQISKQIEKAKIEIAGEDFREGLTAVIAIKVAEPQFEGQTKTKLGNSEVAG 361
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V Q+V E L++YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALSDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESV 481
Query: 540 QNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV+ E DF+ + LRY KIII+TDADVDG+HI TL++T FYRY +
Sbjct: 482 MNIIQSIGVRFGVENEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVI 541
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
++G +Y+ PPLYK K +YCY + + L K + QR+KGLGEM P
Sbjct: 542 EQGHLYIATPPLYKCTYKKVSEYCYTEQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|145578013|gb|ABP82725.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar graciosensis]
Length = 632
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 325/643 (50%), Positives = 436/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+ I+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWGIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGETDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|433426701|ref|ZP_20406924.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|448570957|ref|ZP_21639468.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|448595853|ref|ZP_21653300.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
gi|432196866|gb|ELK53287.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|445722875|gb|ELZ74526.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|445742307|gb|ELZ93802.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
Length = 639
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/635 (50%), Positives = 430/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L SD ++ + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|257051220|ref|YP_003129053.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
gi|256689983|gb|ACV10320.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
Length = 637
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/630 (50%), Positives = 429/630 (68%), Gaps = 20/630 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AV+KRPAMYIGST RGLHHLVYE++DNA+DEA AG+ +IEV +
Sbjct: 7 YGAGQIQVLEGLQAVQKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDHIEVTIHD 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IPID+H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDDGRGIPIDIHEEYDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ LEV V R+G + Q + G P LT + +D D GT IRFWPD+++F T
Sbjct: 125 NALSQKLEVEVSREGNVWKQTFDHGAPADDLT-EIRSLDDPDETGTTIRFWPDEEIFETT 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F +T+A R+RELAFLN + I L +D + + + + GG+ E+V++LN K P
Sbjct: 184 -DFQFSTLANRLRELAFLNSGVEITL----ADDREERAETFQYEGGIREFVEYLNETKDP 238
Query: 308 LHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V + +D D I +++ALQ ++ ++ +AN+I T +GG+H+ G K +LTR +N
Sbjct: 239 LHDEVVYFEDEDQDIQVEVALQATTELQG-SIHAFANNINTREGGSHLTGFKTALTRVVN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + D + +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR VV+ ++
Sbjct: 298 DYATTNDLLSDIEETLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGVVESAMH 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L Y E +P V +I+ K++ A KA AA++A +L R+KS L S++LPGKLADC +
Sbjct: 358 ENLGTYFEENPAVAQAIVRKAVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQTKD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P +E+FI EGDSAGGSAKQ R+ FQA+LP+RGKILNVE+ + +NE+I+N+I AL
Sbjct: 418 PSRAELFIAEGDSAGGSAKQARNPDFQAVLPIRGKILNVEKHRLDRILENEQIRNIITAL 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV G++F + LRY KII TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPL
Sbjct: 478 GTGV-GDEFDLDELRYEKIIFATDADVDGAHIRTLLLTFFYRHMRPLLEGGHVYAARPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y++ + DAE ++ + IQRFKGLGEM P QLW+TT+NPE R LK
Sbjct: 537 YRIRYRGETYDAMTDAERDEIIEEKCNGNPTQIQRFKGLGEMNPQQLWDTTMNPENRFLK 596
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
++ I+DAA A+ +FS LMG V+ RK+ I+
Sbjct: 597 RITIDDAAAADKMFSVLMGDAVEPRKQFIK 626
>gi|145577991|gb|ABP82714.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 631
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/642 (50%), Positives = 435/642 (67%), Gaps = 27/642 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIVVTDDGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NAL LEV V RDG ++QKY RG P L + DR GT RF PD ++FT
Sbjct: 122 NALPTELEVFVHRDGKIHYQKYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY P
Sbjct: 472 AIGTNIGG-DFAIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYAQ-P 529
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PLFKVQQGKKIQYAYNNKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 589
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 631
>gi|145578005|gb|ABP82721.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar bolivia]
Length = 632
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 437/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+++ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIYEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIIDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|448649276|ref|ZP_21679989.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
gi|445773920|gb|EMA24949.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
Length = 642
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/638 (49%), Positives = 431/638 (67%), Gaps = 26/638 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V + + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLKPDEETGTTVRFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 303
T +F +T++ R+RELAFLN + I++ D E++ E F + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI-----DDERDGETETFAYDGGIREFVEYLNE 235
Query: 304 DKKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 236 TKDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFK 294
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 TSLTRVINDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 354
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGK
Sbjct: 355 GIVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGK 414
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N E
Sbjct: 415 LADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNE 474
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+NLI ALG G+ G++F + LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G
Sbjct: 475 IRNLITALGTGI-GDEFDIDDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGY 533
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY++ DAE + +QRFKGLGEM P QLWETT+
Sbjct: 534 VYASQPPLYRIRYRGNTYDAMTDAERDTIIEEKCDGNPTQVQRFKGLGEMNPDQLWETTM 593
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
NP+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 594 NPDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|383812021|ref|ZP_09967468.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
gi|383355407|gb|EID32944.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
Length = 657
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/655 (47%), Positives = 435/655 (66%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIE+ +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEITIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y +GKP+ + V + GTR +FWPD +FTT
Sbjct: 128 VNALSTHMMSQVYRDGKIYQQEYEKGKPLYPVKV----VGETQKTGTRQQFWPDPTIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 304
+ + + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-YQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTR
Sbjct: 243 RQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTR 301
Query: 364 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
TL S SK ++ I ++GE REGLT +I+++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKSYADNDPQISKQIEKAKIEIAGEDFREGLTAVIAIKVAEPQFEGQTKTKLGNSEVAG 361
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V Q+V E L++YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALSDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESV 481
Query: 540 QNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV+ E DF+ + LRY KIII+TDADVDG+HI TL++T FYRY +
Sbjct: 482 MNIIQSIGVRFGVENEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVI 541
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
++G +Y+ PPLYK K +YCY + + L K + QR+KGLGEM P
Sbjct: 542 EQGHLYIATPPLYKCTYKKVSEYCYTEQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|190710577|gb|ACE95119.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/635 (50%), Positives = 431/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDEGQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|344211462|ref|YP_004795782.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
gi|343782817|gb|AEM56794.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
Length = 642
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/637 (49%), Positives = 430/637 (67%), Gaps = 24/637 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI----IDERDGETETFAYDGGIREFVEYLNET 236
Query: 305 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N EI
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+NLI ALG G+ G++F + LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G +
Sbjct: 476 RNLITALGTGI-GDEFDIDDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYV 534
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y PPLY++ DAE K+ +QRFKGLGEM P QLWETT+N
Sbjct: 535 YASQPPLYRIRYRGNTYDAMTDAERDKIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTMN 594
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
P+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 595 PDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|392530709|ref|ZP_10277846.1| DNA gyrase subunit B [Carnobacterium maltaromaticum ATCC 35586]
Length = 645
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/646 (49%), Positives = 431/646 (66%), Gaps = 21/646 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ +++ Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+AS I
Sbjct: 9 DALAQEYDASQIQVLEGLEAVRKRPGMYIGSTSGQGLHHLVWEIVDNSIDEALAGFASEI 68
Query: 131 EVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
V + DNSI PI + T + A+ETV TVLHAGGKFGG S LHG
Sbjct: 69 NVIIEEDNSITVIDDGRGIPIGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHG 126
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS LEV V +DG ++QK+ +GK L + DRQGT + F PD
Sbjct: 127 VGSSVVNALSTILEVMVHKDGKIHYQKFHQGKVGEDLKI----IGDTDRQGTTVHFVPDP 182
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++FT F+ ++ R+RELAFLN L I++ ED + E+ + GG++ YV+ L
Sbjct: 183 EIFTETTVFEFEKLSTRVRELAFLNKGLKISI--EDKREGQETLKEFHYEGGIKSYVEHL 240
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N +K L D + + GI ++ A+Q+ +D Y +L +AN+I T +GGTH G K +
Sbjct: 241 NHNKTVLFEDPIYIEGEQQGIVVEAAMQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTA 299
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N +KSK +K+ + +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN E R +
Sbjct: 300 LTRVINDYARKSKLMKENEENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEARTI 359
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D+ + ++L +P V ++ K + A KA LAAKRAR++ R+KS L S+LPGKLA
Sbjct: 360 TDRLFSAHFDKFLMENPQVARRVIEKGILASKARLAAKRAREVTRKKSGLEISNLPGKLA 419
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P SEIFIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI+
Sbjct: 420 DCSSKDPSISEIFIVEGDSAGGSAKQGRSRLFQAILPIRGKILNVEKATLDKILANEEIR 479
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y
Sbjct: 480 SLFTAMGTGFGG-DFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVY 538
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLY+V +GK++ Y DAEL+ P+ IQR+KGLGEM QLW TT++P
Sbjct: 539 IAQPPLYQVRQGKKMVYLDSDAELEAYLKEIPAQPKPVIQRYKGLGEMDAEQLWSTTMDP 598
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
E+R + Q+ ++DA EA+ VF LMG RV+ R++ I +NA + NLD
Sbjct: 599 ERRRMLQVTVDDAIEADQVFEMLMGDRVEPRRKFIEENAVYVQNLD 644
>gi|281491407|ref|YP_003353387.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis KF147]
gi|281375141|gb|ADA64657.1| DNA gyrase, subunit B [Lactococcus lactis subsp. lactis KF147]
Length = 651
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/649 (48%), Positives = 444/649 (68%), Gaps = 25/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS L+VTV +DG +Y+Q+Y RG L + DR+GT + F PD ++
Sbjct: 129 SSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKI----IGETDRRGTTVHFVPDPEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 304 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRSL 482
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 FTAMGTGF-GADYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIA 541
Query: 603 VPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWET 656
PP+Y ++ G + + E L++ + + ++QR+KGLGEM QLWET
Sbjct: 542 QPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWET 601
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 602 TMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|402847272|ref|ZP_10895569.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266748|gb|EJU16165.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 655
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/662 (47%), Positives = 432/662 (65%), Gaps = 27/662 (4%)
Query: 63 IATEAFKENPVS-KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
++ E F ++ + K Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DE
Sbjct: 1 MSEELFDQDHTNEKEYSASSIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDE 60
Query: 122 AQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSG 172
A AGY ++I+V + DNSI P+D+H KSALE VLTVLHAGGKF S
Sbjct: 61 ALAGYCNDIKVTIHEDNSIEVQDNGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGS-- 118
Query: 173 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 232
Y VSGGLHGVG+S VNALS L+ TV RDG Y Q++SRG P T L + + D+ G
Sbjct: 119 YKVSGGLHGVGVSCVNALSTLLKATVQRDGKIYTQEFSRGVPTTELQT----IGTTDKTG 174
Query: 233 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ--YNEYFF 290
T + F PD +FT+ ++ +A R+RELAFLN +T+ L E E Y+
Sbjct: 175 TTVLFKPDDTIFTST-EYQFKILATRLRELAFLNAGITLTLTDERQRDEAGVALTETYYS 233
Query: 291 AGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 349
GLEE+V++++ K+ L DV+ + GI +++A+ + + +Y++ + Y N+I TI+
Sbjct: 234 EKGLEEFVKYIDRSKEHLIEDVIHIITEKQGIPVEVAMTYNT-SYNENVYSYVNNINTIE 292
Query: 350 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 409
GGTH+ G + LTRTL SK + + ++G+ REGLT ++S++V P+FEGQTK
Sbjct: 293 GGTHLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGLTAVVSIKVAEPQFEGQTK 352
Query: 410 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 469
T+LGN EV VD +V E L YLE HP I+ K + A A AA++AR++V++KS
Sbjct: 353 TKLGNNEVMGAVDVAVSEALEIYLEEHPKEAKIIVDKVILAATARQAARKAREMVQRKSP 412
Query: 470 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKD 529
L LPGKLADCSS P SE+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+
Sbjct: 413 LSGGGLPGKLADCSSKDPILSELFLVEGDSAGGTAKQGRDREFQAILPLRGKILNVEKAM 472
Query: 530 EAAMYKNEEIQNLIRALGLGVKGED----FKKEALRYHKIIILTDADVDGAHIRTLLLTF 585
+ + ++EEI+N+ ALG+ + E+ LRYHK+II+TDADVDG+HI TL+LTF
Sbjct: 473 QHKVLESEEIRNIYTALGVTIGTEEDSMALNLSKLRYHKVIIMTDADVDGSHIATLILTF 532
Query: 586 FYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV--KSSFPSNALYSIQRFK 643
F+R ++L + G +Y+ PPLY RGK+ +YC+ + + + + +QR+K
Sbjct: 533 FFRNMRSLIENGYVYIATPPLYLCTRGKEREYCWTEQQRQAFIDRVGGGDENRVRVQRYK 592
Query: 644 GLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVN 703
GLGEM QLWETT+NPE R L+++ IE+AAEA+ +FS LMG V R+E I+ A
Sbjct: 593 GLGEMNEEQLWETTMNPENRTLRKITIENAAEADAIFSMLMGDDVAPRREFIEANATYAR 652
Query: 704 LD 705
+D
Sbjct: 653 ID 654
>gi|329964535|ref|ZP_08301589.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
gi|328524935|gb|EGF51987.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
Length = 657
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/659 (47%), Positives = 432/659 (65%), Gaps = 43/659 (6%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISENGLHHLVYEVVDNSIDEAMAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQ 242
VNALS+ + V+R+G Y Q+Y GKP+ + TC GT+ FWPD
Sbjct: 130 VNALSKHMTTQVFRNGKIYQQEYECGKPLYAVKEVGTC------DPGFSGTKQTFWPDDS 183
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEY 297
+FT + ++ + T+ R+RELA+LN +TI L + E+ +P Q ++ G++E+
Sbjct: 184 IFTVS-EYKYTTLQARLRELAYLNKGITITLTDLRSKDEEGNP---QVEKFHSEEGVKEF 239
Query: 298 VQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++LN++ PL D V+ + G+ I+ A+ + + Y + + Y N+I T +GGTH G
Sbjct: 240 VRYLNSNNNPLFDDVIYLNTEKAGVPIECAIMY-NTGYRENLHSYVNNINTKEGGTHEGG 298
Query: 357 VKASLTRTLNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+A+LTR L G+ + K ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN
Sbjct: 299 FRAALTRVLKKYGEDTCAKQLEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGN 358
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV V+Q+V E L+ YLE HP I+ K + A A +AA++AR+ V++KS +
Sbjct: 359 SEVSGAVNQAVGEALSYYLEEHPKEAKLIVEKVILAATARVAARKARESVQRKSPMSGGG 418
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
+PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ +
Sbjct: 419 MPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAF 478
Query: 535 KNEEIQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
+++E+ N+I+ALG+ GV ED K+ + LRY K+II+TDADVDG+HI TL++T F+RY
Sbjct: 479 ESDEVNNIIQALGIRFGVDSEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRY 538
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLG 646
+ G +Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLG
Sbjct: 539 FPQVIQNGYLYIATPPLYLCSKGKVKEYCWTDQQRQKFIDTYGGGSENAIHT-QRYKGLG 597
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
EM P QLWETT+NPE RMLKQ+ +E AAEA+ VFS LMG V R++ I+ A N+D
Sbjct: 598 EMNPEQLWETTMNPENRMLKQVHLESAAEADYVFSMLMGEDVGPRRDFIEANATYANID 656
>gi|288801620|ref|ZP_06407062.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
gi|288335662|gb|EFC74095.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
Length = 655
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/662 (47%), Positives = 442/662 (66%), Gaps = 36/662 (5%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
ENP ++ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 3 ENPENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQ 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
NIEV + DNSI P+D+H +KSALE V+TVLHAGGKF S Y VSGGL
Sbjct: 63 NIEVTINEDNSITVEDDGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS ++ V+RDG Y Q+Y +GKP+ + V D+ GTR +FWP
Sbjct: 121 HGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEY 297
D ++FTT + + +A R+RELA+LN + I L DPE + E F A GL+E+
Sbjct: 177 DPEIFTTTV-YQWAIVARRMRELAYLNAGIKITLSDLRPDPETGKTRTEVFHAKDGLKEF 235
Query: 298 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++++ ++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G
Sbjct: 236 VRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQG 294
Query: 357 VKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
+A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+L
Sbjct: 295 FRAALTRTLKTYADNDPQISKQLEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKL 354
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+
Sbjct: 355 GNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSG 414
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+
Sbjct: 415 GGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHR 474
Query: 533 MYKNEEIQNLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFY 587
+++ E + N+I+++G+ GV+GE DF+ + LRY KIII+TDADVDG+HI TL++T FY
Sbjct: 475 VFEAESVMNIIQSIGVRFGVEGEGDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFY 534
Query: 588 RYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFK 643
RY + ++G +Y+ PPLYK K +YCY + + + K + + QR+K
Sbjct: 535 RYMPKVIEQGHLYIATPPLYKCTYKKVSEYCYTEQQRQAFIDKYANGDEEDKAIHTQRYK 594
Query: 644 GLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVN 703
GLGEM P QLWETT++P+ R+LKQ+ IE+ + + +FS LMG V+ R+E I+ A N
Sbjct: 595 GLGEMNPEQLWETTMDPKTRLLKQVTIEN--DVDDIFSMLMGDDVEPRREFIEKNATYAN 652
Query: 704 LD 705
+D
Sbjct: 653 ID 654
>gi|150003955|ref|YP_001298699.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|294775119|ref|ZP_06740648.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|319639808|ref|ZP_07994538.1| B subunit [Bacteroides sp. 3_1_40A]
gi|345518957|ref|ZP_08798390.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|423312902|ref|ZP_17290838.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
gi|149932379|gb|ABR39077.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|254833591|gb|EET13900.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|294451163|gb|EFG19634.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|317388625|gb|EFV69474.1| B subunit [Bacteroides sp. 3_1_40A]
gi|392686933|gb|EIY80232.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
Length = 654
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/652 (48%), Positives = 425/652 (65%), Gaps = 32/652 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT- 245
VNALS + V+R G Y Q+YS G P+ + V V + D GT+ FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRGGKIYQQEYSCGHPLYS----VKEVGTADITGTKQTFWPDDTIFTV 185
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNT 303
T +FD + R+RELA+LN +TI+L E + + F G++E+V++LN
Sbjct: 186 TEYKFD--ILQARMRELAYLNKGITISLTDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNR 243
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ + L +DV+ + + I+ A+ + + Y +++ Y N+I TI+GGTH G +++LT
Sbjct: 244 NNEALINDVIYLNTEKNNTPIECAIMYNT-GYRESLHSYVNNINTIEGGTHEAGFRSALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R L + +K ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+
Sbjct: 303 RVLKKYAEDTKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADC
Sbjct: 363 QAVGEALTYYLEEHPKEAKQIVDKVILAATARIAARKARESVQRKSPMGGGGLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE E+F+VEGDSAGGSAKQGR R FQAILPLRGKILNVE+ ++++E+ N+
Sbjct: 423 SSRNPEECELFLVEGDSAGGSAKQGRSRAFQAILPLRGKILNVEKAMWHKAFESDEVNNI 482
Query: 543 IRALGL--GVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
I ALG+ GV G D K+A LRYHK++I+TDADVDG+HI TL++T FYRY + +
Sbjct: 483 ITALGVRFGVDGNDDSKKANIDKLRYHKVVIMTDADVDGSHIDTLIMTLFYRYMPEIIEN 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQL 653
G +Y+ PPLYK +GK +YCY + + + N +++ QR+KGLGEM P QL
Sbjct: 543 GHLYIANPPLYKCSKGKISEYCYTEEARQAFIQKYGDGQENGIHT-QRYKGLGEMNPEQL 601
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
WETT+NPE R+LKQ+ I++AA + +FS LMG V R+E I+ A N+D
Sbjct: 602 WETTMNPETRILKQVTIDNAANVDYIFSMLMGDDVAPRREFIEKNATYANID 653
>gi|448667078|ref|ZP_21685679.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
gi|445770600|gb|EMA21659.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
Length = 642
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/637 (49%), Positives = 430/637 (67%), Gaps = 24/637 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI----IDERDGETETFAYDGGIREFVEYLNET 236
Query: 305 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N EI
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+NLI ALG G+ G++F + LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G +
Sbjct: 476 RNLITALGTGI-GDEFDIDDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYV 534
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y PPLY++ DAE K+ +QRFKGLGEM P QLWETT+N
Sbjct: 535 YASQPPLYRIRYRGDTYDAMTDAERDKIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTMN 594
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
P+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 595 PDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|145577997|gb|ABP82717.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar pulsiensis]
Length = 632
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 436/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + + IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKVQQGKKIQYAYNEKELEKILAELSAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|442803502|ref|YP_007371651.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442739352|gb|AGC67041.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 643
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/648 (49%), Positives = 429/648 (66%), Gaps = 26/648 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y EQIQVLEG+EAVRKRP MYIGST RGLHHLVYEILDN++DEA AG+ I+V +
Sbjct: 9 KKYDEEQIQVLEGIEAVRKRPGMYIGSTSVRGLHHLVYEILDNSIDEALAGFCDKIKVII 68
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+ +HP LE V T LH+GGKFGGS GY VSGGLHGVG +
Sbjct: 69 HKDNSVTNIDNGRGIPVGIHPKMGIPTLEVVHTTLHSGGKFGGS--GYKVSGGLHGVGAA 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE + V V RDG Y Q+Y RGK VT + V D GT F PD ++F
Sbjct: 127 VVNALSEWMVVEVMRDGKRYRQRYERGKAVTGIEI----VGEADSTGTITTFKPDPEIFE 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++FD+ + R RE+AFLN LTI E D K N + GG+ +V+++N +K
Sbjct: 183 -VVEFDYEMLLKRFREIAFLNKGLTIQFIDERGDEVKE--NILHYEGGIISFVKYINQNK 239
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD ++ + + I++A Q+ +D++++ + YAN+I T +GGTH+ G KA++T+
Sbjct: 240 DVIHDDIIYLEGQKENMEIEIAFQY-TDSFNENIFSYANNIPTTEGGTHVTGFKAAITKV 298
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSGE VREG+T II++++ +P+FEGQTKT+LGN +VR+ V+
Sbjct: 299 INDYARKINMLKDNDKNLSGEDVREGITAIINMKLTDPQFEGQTKTKLGNADVRQFVENL 358
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L LE +P I+ KSL++ +A AA++AR+L ++KS + + SLPGKLADC
Sbjct: 359 VTEKLQYILEENPKTARIIVEKSLASYRAREAARKARELTKRKSAMENFSLPGKLADCQE 418
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E+FIVEGDSAGGSAK GRDRR+QAILPL GK+LNVE+ +Y N+++ +I
Sbjct: 419 KDPRLCELFIVEGDSAGGSAKMGRDRRYQAILPLWGKMLNVEKSRADKVYGNDKLTPIIT 478
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G G+D LRYHK+II+ DADVDG HIRTLLLTFFYRY + L + G +Y+ +P
Sbjct: 479 ALGAGF-GDDMDLSKLRYHKVIIMADADVDGHHIRTLLLTFFYRYMRPLIENGHVYIALP 537
Query: 605 PLYKVERGKQVQYCYDDAELKKV---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PLYKV +GK+ Y Y+D EL+K+ K IQRFKGLGEM P QLWETT++P+
Sbjct: 538 PLYKVSKGKEEYYVYNDNELEKLLKEKGWKRGEGSLIIQRFKGLGEMNPEQLWETTMDPK 597
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R + ++ + + EA +F+ LMG +V+ RKE I A VN +LD+
Sbjct: 598 TRKMLKVDLNNPVEAEEIFTILMGEKVEPRKEFIHQYAKKVN--NLDV 643
>gi|319900374|ref|YP_004160102.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
gi|319415405|gb|ADV42516.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
Length = 657
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/652 (48%), Positives = 429/652 (65%), Gaps = 29/652 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISENGLHHLVYEVVDNSIDEAMAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDWHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ + V+R+G Y Q+Y GKP+ + + + GT+ FWPD +FT
Sbjct: 130 VNALSKHMTTQVFRNGKIYQQEYECGKPLYAVK--EMGLCEPGLSGTKQTFWPDDSIFTV 187
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 304
+ ++ H T+ R+RELA+LN + I L D E EYF + G++E+V++LN++
Sbjct: 188 S-EYKHTTLQARLRELAYLNKGIRITLTDLRVKDEEGKPLTEYFHSEEGVKEFVRYLNSN 246
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
PL DV+ + G+ I+ A+ + + Y + + Y N+I T +GGTH G +A+LTR
Sbjct: 247 NTPLFDDVIYLNTEKSGVPIECAIMY-NTGYRENLHSYVNNINTREGGTHEGGFRAALTR 305
Query: 364 TLNSLGKK--SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
L SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V
Sbjct: 306 VLKKYADDNCSKALEKAKVEISGEDFREGLIAVISVKVSEPQFEGQTKTKLGNNEVSGAV 365
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+Q+V E L+ YLE HP I+ K L A A +AA++AR+ V++KS + +PGKLAD
Sbjct: 366 NQAVGEALSNYLEEHPKEAKVIVDKVLLAATARVAARKARESVQRKSPMSGGGMPGKLAD 425
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS PEE E+F+VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N
Sbjct: 426 CSSKDPEECELFLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNN 485
Query: 542 LIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+ALG+ GV ED K+ + LRY K+II+TDADVDG+HI TL++T F+RY +
Sbjct: 486 IIQALGIRFGVDSEDSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQN 545
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQL 653
G +Y+ PPLY +GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QL
Sbjct: 546 GYLYIATPPLYLCSKGKVKEYCWTDQQRQKFIDAYGGGSENAIHT-QRYKGLGEMNPDQL 604
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
WETT+NPE RMLKQ+ +E+AAEA+ VFS LMG V R++ I++ A N+D
Sbjct: 605 WETTMNPENRMLKQVHLENAAEADYVFSMLMGEDVGPRRDFIESNATYANID 656
>gi|292655722|ref|YP_003535619.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|448289708|ref|ZP_21480871.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|302425107|sp|D4GZ01.1|GYRB_HALVD RecName: Full=DNA gyrase subunit B
gi|291372625|gb|ADE04852.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|445581225|gb|ELY35586.1| DNA gyrase subunit B [Haloferax volcanii DS2]
Length = 639
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/635 (50%), Positives = 430/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L SD ++ + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPAESELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|421144701|ref|ZP_15604609.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488928|gb|EJG09775.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 635
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/646 (49%), Positives = 430/646 (66%), Gaps = 29/646 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVIDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTIHYQKYHRGKPEEDV--KVIGACDENEHGTIVRFKADAEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-- 304
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDT 234
Query: 305 ---KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+KP + + D + +D+ + + + ++ + + N+I T +GGTH++G + +L
Sbjct: 235 TIIEKPFY----VSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTAL 289
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ +N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V
Sbjct: 290 TKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIV 349
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLAD
Sbjct: 350 NTIVSNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLAD 409
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C+S EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+
Sbjct: 410 CTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRA 469
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
++ A G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+
Sbjct: 470 MVTAFGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYI 528
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP
Sbjct: 529 ACPPLYKVASGKQIVYAYNDLELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNP 588
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R+L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 589 DGRLLLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|343520664|ref|ZP_08757633.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397622|gb|EGV10156.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
Length = 638
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/646 (48%), Positives = 442/646 (68%), Gaps = 30/646 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++ I+VL GLE VR RP MYIGSTG +GLHHLVYE++DN++DEA AG I V +
Sbjct: 7 RNYGAKDIKVLTGLEPVRLRPGMYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTI 66
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+++HP T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+S
Sbjct: 67 FDDNSVRVEDNGSGIPVEVHPQTGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L V RDG Y Q++SRG + L V + GT I F PD ++F
Sbjct: 125 VVNALSEWLIANVKRDGKLYEQQFSRGNATSKLEV----VGTSKETGTIITFKPDSEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 304
T I F+ + R RE+AFLN + I E D Y E F + GG++ +V+++N +
Sbjct: 181 TTI-FEKEILRNRFREMAFLNKGVKIVFTDERED-----YTETFHYEGGIKSFVEYMNRN 234
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH+ V+ F+ +++++Q+ +D YS+ +L +AN+I T +GG+H+ G K +LTR
Sbjct: 235 KNNLHNEVIYFQGQRGDSQVEISMQY-TDGYSENVLTFANNIHTPEGGSHLVGFKTALTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN G+K +KDK+ +L G+ REGLT I+S+++PNP+FEGQTK +LGN E R +V+
Sbjct: 294 TLNDYGRKYNLIKDKEANLQGDDTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVET 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ + L +LE +P V ++ K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC
Sbjct: 354 FLYDNLMTFLEENPKVGKIVIEKAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQ 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ +EI++VEGDSAGGSAKQGRD +FQA+LPL+GKI+NVE+ + EEI+++I
Sbjct: 414 ESDISVNEIYLVEGDSAGGSAKQGRDSKFQAVLPLKGKIMNVEKARIDKILGYEEIKSMI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G+DFK + LRY KI+I+TDADVDGAHIRTL+LTFFYRY + L ++G +Y+
Sbjct: 474 TAFGTGI-GKDFKLDNLRYGKIVIMTDADVDGAHIRTLILTFFYRYMRELIEQGHVYIAQ 532
Query: 604 PPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY + +G K V+YC+ D EL+ ++ + IQR+KGLGEM P QLWETT+NPE
Sbjct: 533 PPLYGIIKGVKVVKYCWTDEELQASLDELGRDS-HRIQRYKGLGEMNPAQLWETTMNPEN 591
Query: 663 RMLKQLVIEDAAEANV--VFSSLMGARVDTRKELI-QNAANLVNLD 705
R+ Q+ I+D ++ FS+LMG +V+ R+E I QNA + N+D
Sbjct: 592 RLFLQVNIDDEELVSIDETFSTLMGDKVEPRREFIEQNAKYVENID 637
>gi|190710595|gb|ACE95128.1| gyrase subunit B [Bacillus thuringiensis serovar pondicheriensis]
Length = 627
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/636 (50%), Positives = 432/636 (67%), Gaps = 25/636 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|145578007|gb|ABP82722.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
Length = 632
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 436/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVDGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V ++ K A +A +AAK+AR+L R+K L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKMVEKGTMAARARVAAKKARELTRRKRALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 632
>gi|333029415|ref|ZP_08457476.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
gi|332740012|gb|EGJ70494.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
Length = 652
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 310/648 (47%), Positives = 431/648 (66%), Gaps = 26/648 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVLEGLEAVRKRPAMYIG T +GLHHLVYE++DN++DEA AGY +I+V +
Sbjct: 12 SYKADSIQVLEGLEAVRKRPAMYIGDTSLKGLHHLVYEVVDNSIDEALAGYCDHIDVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P D H +SALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVKDNGRGIPTDFHEKEQRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V R+G+ Y Q+Y+ GKP V V + D GT+ FWPD +FT
Sbjct: 130 VNALSTRMITEVSRNGITYRQEYACGKP----QYPVKEVGTTDDTGTKQTFWPDPTIFTV 185
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 304
+ + ++ +A R+RELAFLN L I+L + + E Y F GL+E+V+++++
Sbjct: 186 LV-YSYDILATRMRELAFLNAGLKISLTDKRTQNEDGTYKSESFQSKEGLKEFVRYIDSS 244
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ L +DV+ + G+ I++A+ + + ++S+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYLNTEKQGVPIEVAIMYNT-SFSENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +K + + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKLLDKIKVDISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNTEVMGAVDQ 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L YLE HP +I+ K + A A AA++AR+LV++KS + LPGKLADCS
Sbjct: 364 AVGEALNYYLEEHPREAKTIVDKVILAATARHAARKARELVQRKSPMSGGGLPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
PE E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ ++EEI+N+
Sbjct: 424 EKNPEICELFLVEGDSAGGTAKQGRDRSFQAILPLRGKILNVEKAMYHKALESEEIRNIY 483
Query: 544 RALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ KEA LRYHKIII+TDADVDG+HI TL++TFF+RY + G +
Sbjct: 484 TALGVTIGTEEDSKEANLEKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQMIQNGYL 543
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSF--PSNALYSIQRFKGLGEMMPVQLWETT 657
Y+ PPLY +GK +YC+ + + +++ S + IQR+KGLGEM QLWETT
Sbjct: 544 YIATPPLYLCRKGKTEEYCWTEEQRLAFINNYGGGSESGIHIQRYKGLGEMNAHQLWETT 603
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
++P+ RMLKQ+ I++A++A+ +FS LMG V R+E I+ A N+D
Sbjct: 604 MDPDNRMLKQVTIDNASDADRIFSMLMGEDVGPRREFIEENATYANID 651
>gi|448678345|ref|ZP_21689352.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
gi|445772332|gb|EMA23377.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
Length = 642
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/638 (49%), Positives = 431/638 (67%), Gaps = 26/638 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT ++FWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVQFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNT 303
T +F +T++ R+RELAFLN + I++ E D + E Y+ GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISIHDERDGETETFAYD-----GGIREFVEYLNE 235
Query: 304 DKKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 236 TKDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFK 294
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 TSLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 354
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+V+ ++ + L + E +PD + I+ K++ A KA AA++A +L R+KS L S++LPGK
Sbjct: 355 GIVESAMHDGLATFFEENPDTAEVIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGK 414
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N E
Sbjct: 415 LADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNE 474
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+NLI ALG G+ G++F E LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G
Sbjct: 475 IRNLITALGTGI-GDEFDIEDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGY 533
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY++ DAE K+ +QRFKGLGEM P QLWETT+
Sbjct: 534 VYASQPPLYRIRYRGNTYDAMTDAERDKIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTM 593
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
NP+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 594 NPDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|23097461|ref|NP_690927.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831]
gi|22775684|dbj|BAC11962.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831]
Length = 641
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/642 (49%), Positives = 435/642 (67%), Gaps = 21/642 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +I+V
Sbjct: 10 NQEYGADQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYCDHIQVV 69
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + ALE ++TVLHAGGKFGG S LHGVG
Sbjct: 70 VEEDNSITVKDNGRGIPVDIQQKTGRPALEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 127
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS LEV V RDG + + +G P + + D GT F PD ++F
Sbjct: 128 SVVNALSSELEVYVHRDGKVHFLSFKKGVPDGEIKV----IGDTDITGTVTHFRPDTEIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +++ +T+ R+RELAFLN L I++ + +D E+ Y+ + GG+ YV+++N +
Sbjct: 184 TETTEYNFDTLEQRLRELAFLNKGLKISIEDKRTDREQVTYH---YEGGISSYVEFINKN 240
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K+ LH+ + GI++++A+Q+ +D ++ + +AN+I T +GG+H G ++ LTR
Sbjct: 241 KEVLHEPFFAEGEDQGISVEVAIQY-NDGFASNLYSFANNIHTYEGGSHEVGFRSGLTRI 299
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N KK+ +KD D +LSG+ VREG+T I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 300 INDYAKKNGLIKDGDSNLSGDDVREGMTTIVSIKHPDPQFEGQTKTKLGNSEVRAITDGV 359
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +++L +P I+ K L A +A LAAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 FSEAFSKFLYENPSTAKIIVEKGLMASRARLAAKKARELTRRKSNLEISNLPGKLADCSS 419
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SE++IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N E++ +I
Sbjct: 420 RDAAISELYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILSNNEVRAMIT 479
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV GE+F RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L ++G IY+ P
Sbjct: 480 ALGSGV-GEEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRPLIEQGYIYIAQP 538
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY+V++GK V Y Y+D EL ++ + P +IQR+KGLGEM QLW+TT++P+ R
Sbjct: 539 PLYQVKQGKTVNYAYNDKELDRILNEIPKAPKPNIQRYKGLGEMNADQLWDTTMDPDTRT 598
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ + DA +A+ VF LMG +V+ R+ I +NA + NLD
Sbjct: 599 LLQVELSDAIDADQVFDMLMGDKVEPRRIFIEENAQYVKNLD 640
>gi|150010130|ref|YP_001304873.1| DNA gyrase subunit B [Parabacteroides distasonis ATCC 8503]
gi|149938554|gb|ABR45251.1| DNA gyrase, B subunit [Parabacteroides distasonis ATCC 8503]
Length = 651
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 311/650 (47%), Positives = 433/650 (66%), Gaps = 26/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y ++ IQVLEGLEAVRKRP+MYIG T +GLHHLVYE++DN++DEA AGY + I+V
Sbjct: 9 STEYSADSIQVLEGLEAVRKRPSMYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVV 68
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+H KSALE VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 69 INEDNSITVTDDGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGV 126
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L+ V R+G + Q++S GKP+ + +D+ D+ GT I F PD +F
Sbjct: 127 SCVNALSTYLKAEVRRNGKVHMQEFSCGKPLHDVQV----IDNTDKTGTTISFKPDGSIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLN 302
T ++ ++ +A R+RELAFLN +T+ L + E + F GL+E+V++++
Sbjct: 183 TVT-EYKYDILATRLRELAFLNAGITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYID 241
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ L DV+ + GI +++AL + + +Y++++ Y N I TI+GGTH+ G + L
Sbjct: 242 RSKEKLIPDVIHIVTEKQGIPVEVALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGL 300
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTL + SK ++ + + G+ REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 301 TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAV 360
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D ++ E L YLE HP I+ K + A +A AA++AR+LV++KS L LPGKLAD
Sbjct: 361 DMAIGEALGYYLEEHPKEAKIIVDKVILAAQARHAARKARELVQRKSPLTGGGLPGKLAD 420
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + ++++EEIQN
Sbjct: 421 CSSKDASICELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQN 480
Query: 542 LIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ RA+G+ V ED K E LRYHK+II+TDADVDG+HI TL+LTFF+R ++L + G
Sbjct: 481 IYRAMGVTVGTEDDPKALNMEKLRYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENG 540
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWE 655
+Y+ PPLY ++GK +YC+ + + ++ + SI QR+KGLGEM QLW+
Sbjct: 541 YVYLATPPLYLCKKGKVEEYCWTEQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWD 600
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R LKQ+ I++AAEA+ +F+ LMG V R+E I+ A N+D
Sbjct: 601 TTMNPENRTLKQITIDNAAEADQIFAMLMGEDVGPRREFIEENATYANID 650
>gi|190710605|gb|ACE95133.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/635 (50%), Positives = 429/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGHKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQASLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|269118649|ref|YP_003306826.1| DNA gyrase subunit beta [Sebaldella termitidis ATCC 33386]
gi|268612527|gb|ACZ06895.1| DNA gyrase, B subunit [Sebaldella termitidis ATCC 33386]
Length = 642
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/649 (49%), Positives = 433/649 (66%), Gaps = 24/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIGST +GLHHLV+E++DN+VDEA AG+ I+V
Sbjct: 1 MSDNYNAESITVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSVDEALAGFCDTIKV 60
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+L DN IP+++H KS LE VLTVLHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 RVLEDNIIEVIDNGRGIPVEMHEKMGKSTLEVVLTVLHAGGKF--NNDNYKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE+LE + +DG ++QKY RG P + + +D GT IRF D ++
Sbjct: 119 VSVVNALSETLEAIITKDGKVWYQKYHRGVPEEDIKQ--IGEAPEDAHGTTIRFKADGEI 176
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F T +++D+ + R++E+A+LN L I L E +K + ++ F GG+ +++ +
Sbjct: 177 FET-LEYDYEILLTRLKEMAYLNKGLRIILSDE-RQKDKPKTDDLHFEGGIRDFLSEIAD 234
Query: 304 DKKPLHDVVGFRKDVD-----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
D++ L D++ V+ + +++A+ + + + + + N+I T +GGTH+ G +
Sbjct: 235 DERVLDDIIYMDDSVELDNKKRVEVEIAMTYTI-SQREMVYSFVNNINTHEGGTHVSGYR 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR LN + K+ VKDKD S G VREGL I+S+++P P+FEGQTKT+LGN E+
Sbjct: 294 TALTRVLNEISKQMGLVKDKDGSFQGSDVREGLVAILSIKIPEPQFEGQTKTKLGNSEIT 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
VV V L YLE HP +I+ K L + KA AAK+AR+LV +KS L SLPGK
Sbjct: 354 GVVSGIVGSSLKMYLEDHPKEASNIIEKILMSKKAREAAKKARELVLRKSSLEVGSLPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS E EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +N E
Sbjct: 414 LADCSSKDASECEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAGIGRALENAE 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+ +I A G G G++ E LRYHKIII+TDADVDGAHIRTL+LTFFYR+ + L +EG
Sbjct: 474 IRAMITAFGAGF-GDEMDLEKLRYHKIIIMTDADVDGAHIRTLMLTFFYRHLRELINEGH 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
IY+ PPLYKV+ GKQ+QY Y D +L+ V K N Y IQR+KGLGEM P QLWETT
Sbjct: 533 IYIAQPPLYKVQAGKQIQYVYSDEQLQSVTKVMDQENKRYGIQRYKGLGEMNPEQLWETT 592
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++PE R L ++ +EDA A+ +F+ LMG +V+ R++ I+ A V NLD
Sbjct: 593 MDPEVRTLLKVSLEDATYADKMFNVLMGDKVEPRRQFIEEHAQYVRNLD 641
>gi|448298517|ref|ZP_21488545.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
gi|445591187|gb|ELY45393.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
Length = 643
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/635 (48%), Positives = 433/635 (68%), Gaps = 18/635 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++ + GT++RFW D +F A
Sbjct: 125 NALSERLEAEVRRDGAVFRHAFETGEPVGDME-RVRDMEPDEETGTQVRFWADTDIFE-A 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDK 305
+F +T++ R+RELAFLN + I LR E + ++ + Y + GG+ E+V++LN +
Sbjct: 183 DEFSFSTLSNRLRELAFLNSGVRITLRDEREQTDDGEFVADTYEYDGGIREFVEYLNETR 242
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+HD ++ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHDDIIYFEDEEQNIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N + + D + +L+GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYAGDNGLLSDLEENLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAQAIVMKAVEAAKARKAARKAEELTRRKSALDSTSLPGKLADCQT 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P+E+E+FI EGDSAGGSAKQ R+ +QAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 KDPDEAELFIAEGDSAGGSAKQARNPDYQAILPIKGKILNVEKHRLDRILENDEIRNMIT 481
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+ G++F + +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y P
Sbjct: 482 AIGAGI-GDEFDIDDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQP 540
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY+V + +AE ++ +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 541 PLYRVRYRGETYDAMTEAERDEIVEEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPENRI 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHA 635
>gi|291461019|ref|ZP_06026484.2| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693]
gi|291379423|gb|EFE86941.1| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693]
Length = 639
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 315/642 (49%), Positives = 431/642 (67%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G Y+QKY RGKP + ++ + GT +RF D+ +F T
Sbjct: 124 VNALSEWLEVEVRKEGNVYYQKYYRGKPEEDV--KIIGSCEESEHGTTVRFKADRDIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I +++ T++ R++ELA+LN LTI L D E+ + Y F GG+ +++ + ++
Sbjct: 182 LI-YNYFTLSNRLKELAYLNRGLTITL--SDLRKEEKKEETYKFDGGILDFLNEIVKEEA 238
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ D + + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 239 TIVDKPFYVSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN E+ +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLMGNDIREGVVAIVSTKIPQPQFEGQTKGKLGNSEISGIVNTIV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P + ++ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SNSLKIFLEDNPAITKIVIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 418 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY K L EG IY+ PP
Sbjct: 478 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 537 LYKVSSGKQIIYAYNDLELKNVLGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 597 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|212692798|ref|ZP_03300926.1| hypothetical protein BACDOR_02296 [Bacteroides dorei DSM 17855]
gi|237709487|ref|ZP_04539968.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|265754693|ref|ZP_06089745.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|345514532|ref|ZP_08794043.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|423230241|ref|ZP_17216645.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|423241032|ref|ZP_17222146.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|423243952|ref|ZP_17225027.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
gi|212664587|gb|EEB25159.1| DNA gyrase, B subunit [Bacteroides dorei DSM 17855]
gi|229436655|gb|EEO46732.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|229456543|gb|EEO62264.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|263234807|gb|EEZ20375.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|392631750|gb|EIY25719.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|392643094|gb|EIY36852.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|392643470|gb|EIY37220.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
Length = 654
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/652 (48%), Positives = 424/652 (65%), Gaps = 32/652 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT- 245
VNALS + V+R G Y Q+YS G P+ + V V + D GT+ FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRGGKIYQQEYSCGHPLYS----VKEVGTADITGTKQTFWPDDTIFTV 185
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNT 303
T +FD + R+RELA+LN +TI+L E + + F G++E+V++LN
Sbjct: 186 TEYKFD--ILQARMRELAYLNKGITISLTDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNR 243
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ + L DV+ + + I+ A+ + + Y +++ Y N+I TI+GGTH G +++LT
Sbjct: 244 NNEALIDDVIYLNTEKNNTPIECAIMYNT-GYRESLHSYVNNINTIEGGTHEAGFRSALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R L + +K ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+
Sbjct: 303 RVLKKYAEDTKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADC
Sbjct: 363 QAVGEALTYYLEEHPKEAKQIVDKVILAATARIAARKARESVQRKSPMGGGGLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEE E+F+VEGDSAGGSAKQGR R FQAILPLRGKILNVE+ ++++E+ N+
Sbjct: 423 SSRNPEECELFLVEGDSAGGSAKQGRSRAFQAILPLRGKILNVEKAMWHKAFESDEVNNI 482
Query: 543 IRALGL--GVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
I ALG+ GV G D K+A LRYHK++I+TDADVDG+HI TL++T FYRY + +
Sbjct: 483 ITALGVRFGVDGNDDSKKANIDKLRYHKVVIMTDADVDGSHIDTLIMTLFYRYMPEIIEN 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQL 653
G +Y+ PPLYK +GK +YCY + + + N +++ QR+KGLGEM P QL
Sbjct: 543 GHLYIANPPLYKCSKGKISEYCYTEEARQAFIQKYGDGQENGIHT-QRYKGLGEMNPEQL 601
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
WETT+NPE R+LKQ+ I++AA + +FS LMG V R+E I+ A N+D
Sbjct: 602 WETTMNPETRILKQVTIDNAANVDYIFSMLMGDDVAPRREFIEKNATYANID 653
>gi|301308180|ref|ZP_07214134.1| DNA gyrase, B subunit [Bacteroides sp. 20_3]
gi|423339843|ref|ZP_17317583.1| DNA gyrase, B subunit [Parabacteroides distasonis CL09T03C24]
gi|300833650|gb|EFK64266.1| DNA gyrase, B subunit [Bacteroides sp. 20_3]
gi|409228991|gb|EKN21873.1| DNA gyrase, B subunit [Parabacteroides distasonis CL09T03C24]
Length = 651
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/650 (47%), Positives = 433/650 (66%), Gaps = 26/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y ++ IQVLEGLEAVRKRP+MYIG T +GLHHLVYE++DN++DEA AGY + I+V
Sbjct: 9 STEYSADSIQVLEGLEAVRKRPSMYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVV 68
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+H KSALE VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 69 INEDNSITVTDDGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGV 126
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L+ V R+G + Q++S GKP+ + +D+ D+ GT I F PD +F
Sbjct: 127 SCVNALSTYLKAEVRRNGKVHMQEFSCGKPLHDVQV----IDNTDKTGTTISFKPDGSIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLN 302
T ++ ++ +A R+RELAFLN +T+ L + E + F GL+E+V++++
Sbjct: 183 TVT-EYKYDILATRLRELAFLNAGITLRLTDKRVLKEDGSFKSEIFHSDEGLKEFVRYID 241
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ L DV+ + GI +++AL + + +Y++++ Y N I TI+GGTH+ G + L
Sbjct: 242 RSKEKLIPDVIHIVTEKQGIPVEVALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGL 300
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTL + SK ++ + + G+ REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 301 TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAV 360
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D ++ E L YLE HP I+ K + A +A AA++AR+LV++KS L LPGKLAD
Sbjct: 361 DMAIGEALGYYLEEHPKEAKIIVDKVILAAQARHAARKARELVQRKSPLTGGGLPGKLAD 420
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + ++++EEIQN
Sbjct: 421 CSSKDAAICELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQN 480
Query: 542 LIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ RA+G+ V ED K E LRYHK+II+TDADVDG+HI TL+LTFF+R ++L + G
Sbjct: 481 IYRAMGVTVGTEDDPKALNMEKLRYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENG 540
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWE 655
+Y+ PPLY ++GK +YC+ + + ++ + SI QR+KGLGEM QLW+
Sbjct: 541 YVYLATPPLYLCKKGKVEEYCWTEQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWD 600
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R LKQ+ I++AAEA+ +F+ LMG V R+E I+ A N+D
Sbjct: 601 TTMNPENRTLKQITIDNAAEADQIFAMLMGEDVGPRREFIEENATYANID 650
>gi|256846674|ref|ZP_05552130.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294784381|ref|ZP_06749672.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
gi|256717894|gb|EEU31451.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294487953|gb|EFG35308.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
Length = 639
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/646 (49%), Positives = 429/646 (66%), Gaps = 29/646 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVIDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G ++QKY RGKP + V+ + GT +RF D ++F T
Sbjct: 124 VNALSEWLEVEVRKNGTIHYQKYHRGKPEEDV--KVIGTCDESEHGTIVRFKADGEIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-- 304
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D
Sbjct: 182 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDT 238
Query: 305 ---KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+KP + + D + +D+ + + + ++ + + N+I T +GGTH++G + +L
Sbjct: 239 TIIEKPFY----VSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTAL 293
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ +N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V
Sbjct: 294 TKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIV 353
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLAD
Sbjct: 354 NTIVSNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLAD 413
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C+S EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+
Sbjct: 414 CTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRA 473
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
++ A G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+
Sbjct: 474 MVTAFGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYI 532
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP
Sbjct: 533 ACPPLYKVASGKQIVYAYNDLELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNP 592
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R+L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 593 DGRLLLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|354582066|ref|ZP_09000969.1| DNA gyrase, B subunit [Paenibacillus lactis 154]
gi|353200683|gb|EHB66143.1| DNA gyrase, B subunit [Paenibacillus lactis 154]
Length = 636
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 330/645 (51%), Positives = 434/645 (67%), Gaps = 31/645 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG +IE+ +
Sbjct: 7 TYDENQIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVWEVVDNSIDEAMAGICDHIEIIVH 66
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+ + KS LE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 67 EDNSVTVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P + + + GT + F PD ++FT
Sbjct: 125 VNALSTKVVVQVKRDGHIYQQEYRRGVPQYDIKV----IGDTEETGTTVTFLPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+FD+NT+ R+RELAFLN + + L E + ++YF + GG+ EYV++LN K
Sbjct: 181 TTEFDYNTLLTRVRELAFLNKGIALTLTDE-----RTGASDYFKYEGGIIEYVKFLNEKK 235
Query: 306 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ LH+ V G R D I ++++LQ+ +D+Y++ + +AN+I T +GGTH G K++L
Sbjct: 236 EALHEEPIYVEGSR---DNIQVEISLQY-NDSYTENIYSFANNINTHEGGTHESGFKSAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +K+ +KD +LSG+ VREGLT IISV+VP P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRIINDYARKTGMIKDNSNNLSGDDVREGLTAIISVKVPEPQFEGQTKTKLGNSEVRGIV 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ E L E+L+ +P V IL K+L A +A AA++AR++ R+KS L S+LPGKLAD
Sbjct: 352 ESLFAEKLQEFLQENPSVSRRILEKALQASRAREAARKAREMTRRKSALEVSALPGKLAD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+
Sbjct: 412 CSSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG G+ +DF RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G IY+
Sbjct: 472 IITALGTGI-ADDFDLSKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKLVEAGYIYI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPL+K+ER K V+Y + E ++ F NA ++IQR+KGLGEM QLWETT++PE
Sbjct: 531 AQPPLFKIERNKVVRYAGSEKERDEIIKEFGENAKFNIQRYKGLGEMNATQLWETTMDPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ IEDA A+ +F +LMG V+ R++ IQ A V NLD
Sbjct: 591 SRTMLQVTIEDAMLADTLFDTLMGDNVEPRRDFIQEHAKSVRNLD 635
>gi|345881483|ref|ZP_08833001.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
gi|343919448|gb|EGV30195.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
Length = 656
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 315/655 (48%), Positives = 435/655 (66%), Gaps = 34/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++IE+ +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEITIN 69
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y +GKP+ + V ++GTR +FWPD +FTT
Sbjct: 128 VNALSTHMLSQVYRDGKIYQQEYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
F + +A R+RELA+LN + I LR + E E F A GL+E+V++++ +
Sbjct: 184 TT-FKWDIVASRMRELAYLNAGIRITLRDLRPNEEGKTREEVFHAKDGLKEFVRYVDRHR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRT
Sbjct: 243 THLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRT 301
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKAYADAEPSIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L+ YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLA
Sbjct: 362 VQQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVM 481
Query: 541 NLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + +
Sbjct: 482 NIIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIE 541
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMP 650
+G +Y+ PPLYK K +YCY + + K V+ AL++ QR+KGLGEM P
Sbjct: 542 DGHLYIATPPLYKCTYKKVSEYCYTEQQRQAFIDKYVEGKEDDKALHT-QRYKGLGEMNP 600
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P QR+LKQ+ I++AAEA+ +FS LMG V+ R+ I+ A N+D
Sbjct: 601 DQLWETTMDPAQRLLKQVTIQNAAEADEIFSMLMGDDVEPRRVFIEENATYANID 655
>gi|145577963|gb|ABP82700.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
Length = 632
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 436/643 (67%), Gaps = 26/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP M IGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMCIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+K+++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKIQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENARYVKNLD 632
>gi|373501103|ref|ZP_09591470.1| DNA gyrase, B subunit [Prevotella micans F0438]
gi|371950694|gb|EHO68548.1| DNA gyrase, B subunit [Prevotella micans F0438]
Length = 657
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/663 (47%), Positives = 433/663 (65%), Gaps = 35/663 (5%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
F+EN Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 4 FQEN--ENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYC 61
Query: 128 SNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
NIEV L D S IP+D H +KSALE V+TVLHAGGKF S Y VSGG
Sbjct: 62 KNIEVTLNEDGSVTVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGG 119
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+S VNALS ++ V+RDG Y Q+Y +GKP+ + + + ++ GTR +FW
Sbjct: 120 LHGVGVSCVNALSAHMKSQVFRDGNIYQQEYEKGKPLYPVKI----IGTTEKTGTRQQFW 175
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE--KNQYNEYFFAGGLEE 296
PD +FTT F + +A R+RELA+LN + I L PE K + + GL+E
Sbjct: 176 PDNSIFTTTT-FQWDIVARRMRELAYLNAGIKIILTDMHPHPETGKTRTETFHAEDGLKE 234
Query: 297 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V++++ ++ L +DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+
Sbjct: 235 FVRYVDRHRQHLFNDVIYLKTEKQGIPIEIAIMYNTD-YTENIHSYVNNINTIEGGTHLT 293
Query: 356 GVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
G + +LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+
Sbjct: 294 GFRTALTRTLKAYADGEPTISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTK 353
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN EV V Q+V E L+ YLE HP+ I +K + A A +AA+ AR+ V++K+V+
Sbjct: 354 LGNSEVSGAVQQAVGEALSNYLEEHPNEAKLICNKVILAATARIAARNARESVQRKNVMS 413
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
LPGKLADCS P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+
Sbjct: 414 GGGLPGKLADCSKKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRH 473
Query: 532 AMYKNEEIQNLIRALGL--GVKGED---FKKEALRYHKIIILTDADVDGAHIRTLLLTFF 586
+++ E + N+I+++G+ GV+GED + LRY KIII+TDADVDG+HI TL++T F
Sbjct: 474 RVFEAESVMNIIQSIGVRFGVEGEDDYEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLF 533
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRF 642
YR+ + +EG +Y+ PPLYK K +YCY + + + K QR+
Sbjct: 534 YRFMPKVIEEGHLYIATPPLYKCTYKKISEYCYTEQQRQMFIDKYGDGTEDGKNIHTQRY 593
Query: 643 KGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
KGLGEM P QLWETT++P+ R+LKQ+ IE+AAEA+ +FS LMG V+ R+E I+ A
Sbjct: 594 KGLGEMNPEQLWETTMDPKTRLLKQVNIENAAEADEIFSMLMGDDVEPRREFIEQNATYA 653
Query: 703 NLD 705
N+D
Sbjct: 654 NID 656
>gi|340347373|ref|ZP_08670482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433651140|ref|YP_007277519.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
gi|339609465|gb|EGQ14337.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433301673|gb|AGB27489.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
Length = 657
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/655 (48%), Positives = 431/655 (65%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AG+ +IEV L
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGFCQDIEVTLN 69
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D S IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDGSCTVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y +GKP+ + + DR+GTR +FWPD +FTT
Sbjct: 128 VNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----IGETDRRGTRQQFWPDAGIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
F + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 184 TT-FQWDIVARRMRELAFLNAGIRITLTDLRPNDEGKTRREVFHAKDGLKEFVRYIDRHR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 243 THLFDDVIYLKTEKQGLPIEVAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRMALTRV 301
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKNYADNDAQISKQIEKAKIEVAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+Q+V E LT YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLA
Sbjct: 362 VNQAVGEALTNYLEEHPVEAKQICEKVILAATARVAARKARESVQRKSVMSGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 DCSNKDPKQCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVM 481
Query: 541 NLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T F+R+ + +
Sbjct: 482 NIIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFFRFMPKVIE 541
Query: 596 EGCIYVGVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
EG +Y+ PPLYK +GK +YCY+D + L K QR+KGLGEM P
Sbjct: 542 EGHLYIATPPLYKCTYKGKVSEYCYNDQQRQAFLDKYAGGVDDGKSIHTQRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P QR+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPGQRLLKQVTIENAAQADEIFSMLMGDDVEPRREFIEENAAYANID 656
>gi|184154481|ref|YP_001842821.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227514123|ref|ZP_03944172.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260662542|ref|ZP_05863437.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|385811790|ref|YP_005848181.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
gi|183225825|dbj|BAG26341.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227087494|gb|EEI22806.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260553233|gb|EEX26176.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|299782689|gb|ADJ40687.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
Length = 649
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/652 (48%), Positives = 428/652 (65%), Gaps = 21/652 (3%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E ++ ++ Y + QIQVL+GLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG
Sbjct: 6 EQARKAELASEYDASQIQVLKGLEAVRKRPGMYIGSTTVQGLHHLVWEIVDNGIDEALAG 65
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ I V + DNSI P+D+ T K ALETV TVLHAGGKFG + GY VS
Sbjct: 66 FCDEINVIVEPDNSIIVTDNGRGIPVDIQKETGKPALETVFTVLHAGGKFG--NGGYKVS 123
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD-SKDRQGTRI 235
GGLHGVG SVVNALS L+V V R G EY+ ++RG T + V+ D + GT +
Sbjct: 124 GGLHGVGASVVNALSTELDVKVARQGKEYYMDFARGHVNTAMK--VIKDDLPQSAHGTTV 181
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++F ++ NT+ R+RELAFLN L I + ED K + + + GG+
Sbjct: 182 HFVPDPEIFRETTVYNINTLIDRLRELAFLNKGLKITV--EDRREGKEKQESFHYEGGIR 239
Query: 296 EYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YV++LN + L D + + GIT++++LQ+ D Y +L + N+I T +GGTH
Sbjct: 240 HYVEFLNEGHELLFDPPIYVEGEYKGITVEVSLQYTDD-YRSNLLTFTNNIHTYEGGTHE 298
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K +LTR +N G+KS +K +++LSGE VREGLT ++S++ PNP+FEGQTKT+L N
Sbjct: 299 TGFKTALTRVINDYGRKSGQIKG-NVTLSGEDVREGLTAVVSIKHPNPQFEGQTKTKLSN 357
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
+ R D E +T ++ +PDV I+ K + A KA AAKRAR++ R+KS L S+
Sbjct: 358 SDARTATDHIFAETMTRFMMENPDVARKIVEKGMLASKARDAAKRAREVTRKKSGLEISN 417
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLAD +S P SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ +
Sbjct: 418 LPGKLADNTSKDPAISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASLNRVL 477
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI++L ALG G G+DF YHK+II+TDADVDGAHIRTLLLT FYR+ + +
Sbjct: 478 ANEEIRSLFTALGTGF-GDDFDVNKANYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPMI 536
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
++G +Y+ PPLY+V +GK V+Y +D EL++V +S + IQR+KGLGEM QLW
Sbjct: 537 EKGYVYIAQPPLYQVRQGKFVKYIENDEELERVVNSLQPSPKPVIQRYKGLGEMDAEQLW 596
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
ETT++P R L ++ ++DA A+ +F LMG +V R+E I+ A V NLD
Sbjct: 597 ETTMDPANRHLLRVKLDDAKAADEIFQMLMGTKVGPRREFIEENATFVENLD 648
>gi|323141431|ref|ZP_08076321.1| DNA gyrase, B subunit [Phascolarctobacterium succinatutens YIT
12067]
gi|322414087|gb|EFY04916.1| DNA gyrase, B subunit [Phascolarctobacterium succinatutens YIT
12067]
Length = 646
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/649 (48%), Positives = 443/649 (68%), Gaps = 32/649 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V Y +EQI VLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY S+I+V
Sbjct: 13 VKGNYNAEQIHVLEGLEAVRKRPAMYIGSTSSRGLHHLVYEVVDNSIDEALAGYCSDIKV 72
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ K A+E ++TVLHAGGKFG GY VSGGLHGVG
Sbjct: 73 IIHKDNSITVIDNGRGIPVDMMKKEQKPAVEVIMTVLHAGGKFG--DGGYKVSGGLHGVG 130
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
++ VNALSE +EV V R G Y ++++GK L + GT + F PD +
Sbjct: 131 VTCVNALSEHMEVEVRRGGKCYGIEFAKGKTSKKL----YEKGDCETTGTTVHFKPDATI 186
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++ ++T+ RIRELAFLN +TI+L E ++ + ++ FAGG+ EYV++++
Sbjct: 187 FTET-EYSYDTLRLRIRELAFLNKGITISLTDERAEDKSETFH---FAGGIIEYVEFMDK 242
Query: 304 DK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
DK KP++ + + + +++A+Q+C D YS+ + Y N+I T +GGTH+ G +
Sbjct: 243 DKDKINPKPIY----LEGEKNAVIVEVAMQYC-DTYSENIFTYVNNINTEEGGTHLSGFR 297
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRT+N+ +K+ +K+ + +LSG+ VREGLT ++S++V NP+FE QTK +LGN EV
Sbjct: 298 KALTRTINAYARKTNMLKENEDALSGDDVREGLTAVLSLKVQNPQFESQTKIKLGNSEVM 357
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+VD V + L E++E +P V ++ K++ A +A LAA++AR+L R+K+ + LPGK
Sbjct: 358 PIVDNLVGDTLAEFMEENPQVAKKLVEKAIVAARARLAARKARELTRRKNAMDLGGLPGK 417
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC S E++EI++VEGDSAGGSAKQGR+ FQAILPLRGKILNVE+ + +EE
Sbjct: 418 LADCKSRNVEDTEIYLVEGDSAGGSAKQGRNSDFQAILPLRGKILNVEKARLDKVLSSEE 477
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+N+I A G G+ G+DF E RY KIII+TDADVDGAHIRTLLLTFFYRY + L EG
Sbjct: 478 IRNMITAFGCGI-GDDFNLEKARYGKIIIMTDADVDGAHIRTLLLTFFYRYMQPLIKEGH 536
Query: 599 IYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
+++ PPLY + + KQ Y Y D EL+++ +A +QR+KGLGEM P QLWETT
Sbjct: 537 VFIAQPPLYLIRKNQKQHYYAYSDEELQEILDEVGRDANPYVQRYKGLGEMNPGQLWETT 596
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++P R + Q+ +EDAAEA+ +FS LMG +V+ R++ I+ NA + NLD
Sbjct: 597 MDPAARTILQVHLEDAAEADRIFSILMGDKVEPRRQFIEDNAKKVRNLD 645
>gi|448576111|ref|ZP_21642154.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
gi|445729791|gb|ELZ81385.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
Length = 639
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/635 (50%), Positives = 434/635 (68%), Gaps = 22/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV L
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVTLHE 66
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ADN IP+D H N+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADNGRGIPVDTHEQYNRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV + RDG +H ++ +G+PV V ++ + GT I FWPD ++F T
Sbjct: 125 NALSTELEVEIMRDGAVWHHRFEKGEPVQGAFEKVRDMEPDEETGTTITFWPDGEIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F T+ R+RELAFLN + I+L E S+ + + + F GG+ E+V++LN K
Sbjct: 185 -DFTFKTLETRLRELAFLNSGVEISLTDERSE----ESSTFMFEGGIREFVEYLNETKTA 239
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH DV+ + + +GI +++ALQ +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHEDVIYYEDETEGIAVEVALQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 299 DYANSEGMLSDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESTT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L Y E +PD+ +I+SK++ A +A AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 359 HEKLGTYFEENPDMAKAIISKAVEAARARKAAKKAEELTRRKSALESTALPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P +SE+F+VEGDSAGGSAKQGRDR FQAILP++GKILNVE+ + +N E++ LI A
Sbjct: 419 DPSKSELFVVEGDSAGGSAKQGRDREFQAILPIKGKILNVEKHRLDRILENNEVRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G+ G++F + +RY +II++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGAGI-GDEFDIDDVRYQRIILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVE-RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LY+V RG ++ + ++ N +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 538 LYRVRYRGNTYDAMTEEDRDRLIEEKCNGNPT-QVQRFKGLGEMNPDQLWETTMNPENRV 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LK++ +EDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 597 LKRITVEDAAAADRMFSILMGDAVEPRKQFIKDHA 631
>gi|403743995|ref|ZP_10953474.1| DNA gyrase, B subunit [Alicyclobacillus hesperidum URH17-3-68]
gi|403122585|gb|EJY56799.1| DNA gyrase, B subunit [Alicyclobacillus hesperidum URH17-3-68]
Length = 651
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 432/642 (67%), Gaps = 24/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QI+VLEGL+AVRKRP MYIGST +GLHHLV+EI+DNAVDEA AG + I V +
Sbjct: 22 QVYDESQIEVLEGLQAVRKRPGMYIGSTSVKGLHHLVWEIVDNAVDEALAGRCTRIVVQV 81
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS+ P+ +H T + A+ET LTVLHAGGKFGG+ GY VSGGLHGVG S
Sbjct: 82 HPDNSVSVIDNGAGFPVGIHAKTGRPAVETALTVLHAGGKFGGA--GYKVSGGLHGVGAS 139
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L+V V RDG + Q+Y RG P+ L V DR GT + F PD ++FT
Sbjct: 140 VVNALSEWLKVEVHRDGKIHVQEYERGTPLYDLKV----VGETDRTGTTVTFRPDPEIFT 195
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+F T+ R+RELAFLN L I L E E + EY + GG++E+V +LN K
Sbjct: 196 ETTEFSAETLQNRLRELAFLNAGLEIVLEDER---EGGKRFEYHYEGGVKEFVLYLNHSK 252
Query: 306 KPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L + + V D +T+++ALQ+ +D YS T+ +AN+I T +GGTH G K++LTR
Sbjct: 253 DVLFAEPIYVQGVKDEVTVEIALQY-NDGYSSTLYSFANNINTGEGGTHEAGFKSALTRI 311
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+++ +K D SL+G+ VREGLT ++SV+VP P+FEGQTKT+LGN EVR +V+
Sbjct: 312 INDYGRRNNLIKGSDGSLTGDDVREGLTAVVSVKVPEPQFEGQTKTKLGNSEVRGIVESL 371
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E L +LE +P V IL K + A +A AAKRAR+L R K + +SLPGKL DC S
Sbjct: 372 FGERLQIFLEENPAVARRILEKCVLAARAREAAKRARELTRNKK-MEVTSLPGKLTDCVS 430
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE SE+++VEGDSAGGSAK GRD + QAILPLRGKI+NVE+ + NEEI+ +I
Sbjct: 431 KDPEVSELYLVEGDSAGGSAKGGRDPQTQAILPLRGKIINVEKARLDKVLSNEEIRAIIT 490
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F RYHKI+I+TDAD DG+HIR LLLT FYR+ + L D G IY+ P
Sbjct: 491 ACGTGI-GDEFDLSKARYHKIVIMTDADHDGSHIRILLLTLFYRFMRPLIDAGYIYIAQP 549
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+E+GK ++Y Y D +L++ + +QR+KGLGEM QLWETT++PE R
Sbjct: 550 PLYKIEKGKVIRYAYSDTQLEQALQEMGRQGV-KLQRYKGLGEMNADQLWETTMDPESRT 608
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ +EDA +A+++FS+LMG +V+ R++ I A V NLD
Sbjct: 609 LLQVTMEDAMDADMIFSTLMGDKVEPRRDFIAEHARYVRNLD 650
>gi|448391972|ref|ZP_21567067.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
gi|445665384|gb|ELZ18062.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
Length = 644
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/636 (49%), Positives = 432/636 (67%), Gaps = 19/636 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIND 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LE V RDG + + G+PV + V ++ + GT+IRFWPD +F
Sbjct: 125 NALSERLEAEVKRDGSVFRHAFEEGEPVGDME-RVRDMEEDEETGTQIRFWPDTGIFE-G 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+F +T++ R+RELAFLN + I L R E D + Y + GG+ E+V++LN
Sbjct: 183 DEFSFSTLSNRLRELAFLNSGVRITLSDERTELHDEDAPVEETYEYQGGIREFVEYLNET 242
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHDDVIYFEAEEQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
T+N K + + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYAKDNDMLGDLEDNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
S+ E L Y E HPD +I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 SMHEGLGTYFEEHPDTAQAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ P+E+E+FI EGDSAGGSAKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I
Sbjct: 422 TKDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMI 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 482 TAIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQ 540
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ + + E ++ + +QRFKGLGEM P QLW+TT++P+ R
Sbjct: 541 PPLYRIRYRGETYDAMTEQERDEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNR 600
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ IEDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 601 ILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDNA 636
>gi|261368839|ref|ZP_05981722.1| DNA gyrase, B subunit [Subdoligranulum variabile DSM 15176]
gi|282569109|gb|EFB74644.1| DNA gyrase, B subunit [Subdoligranulum variabile DSM 15176]
Length = 662
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/669 (48%), Positives = 436/669 (65%), Gaps = 30/669 (4%)
Query: 59 LSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNA 118
++ I TE +E YG QIQVLEGLEAVRKRP MYIGSTGP GLHHLVYEI+DN+
Sbjct: 1 MAEEIITETNRETATDHAYGGAQIQVLEGLEAVRKRPGMYIGSTGPSGLHHLVYEIVDNS 60
Query: 119 VDEAQAGYASNIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGS 169
+DEA AGY ++IEV + ++DN IP+D+ P A+ V TVLHAGGKFGG
Sbjct: 61 IDEALAGYCTHIEVTIKPGNIIQVSDNGRGIPVDIQPKLGIPAVTVVYTVLHAGGKFGGE 120
Query: 170 SSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD 229
SGY V+GGLHGVG SVVNALSE L V V RDG EY Q + RGKP L + S
Sbjct: 121 DSGYKVAGGLHGVGASVVNALSEWLTVRVRRDGAEYEQSFQRGKPDGDLK----KIGSAA 176
Query: 230 RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE--DSD-------P 280
GT + F PD ++F Q+ + T+ R+RE AFLN + I L E +SD P
Sbjct: 177 STGTLVIFKPDPEMFQETTQYRYETLLKRLREEAFLNAGVRITLTDERPESDRPAEEKGP 236
Query: 281 EKNQYNEYF-FAGGLEEYVQWL--NTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSD 336
E + +E + GG+ +V +L D PL V + K + G ++ALQ+ ++Y++
Sbjct: 237 ENDGRSETMCYEGGIRSFVSYLCERRDLTPLTPQVMYMKGEGQGAVAEVALQYYDNSYNE 296
Query: 337 TMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIIS 396
+L +AN++ T +GGTH EG K +LTR LN G+ +KDKD +LSG REG+ ++S
Sbjct: 297 LILSFANNVHTPEGGTHEEGFKLALTRVLNEYGRAKGILKDKDENLSGPDAREGIIAVVS 356
Query: 397 VRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALA 456
V++ +FEGQTK +LGN ++ +V+ V + LTEY E +P V +IL K+ A +A A
Sbjct: 357 VKLQEAQFEGQTKAKLGNTFIKGLVNGVVYKALTEYFEENPAVAKAILEKATQAARARAA 416
Query: 457 AKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAIL 516
AK+ARDLVR+KS L S+ +PGKLADC P ++E+FIVEGDSAGGSAK GRD QAIL
Sbjct: 417 AKKARDLVRRKSALESNRMPGKLADCHEKDPSKTELFIVEGDSAGGSAKMGRDSNIQAIL 476
Query: 517 PLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGA 576
PL GK+LNVE+ +Y N+++ ++ ALG G+ G++F +RYHKI I+ DADVDG+
Sbjct: 477 PLWGKMLNVEKARADRIYGNDKLMPVVTALGTGI-GDEFDISKVRYHKIFIMADADVDGS 535
Query: 577 HIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL 636
HI TL+LTFF+RY + L + G +YV PPL+K+++G+ V+Y Y+D E+K + + P
Sbjct: 536 HICTLMLTFFFRYMRPLIEHGYVYVAQPPLFKLQKGQTVKYAYNDDEMKVLSAEMPGA-- 593
Query: 637 YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
+ R+KGLGEM P QLWETT+NP+ R++ Q+ IEDA A+ FS LMG +V+ R++ I
Sbjct: 594 -KVNRYKGLGEMNPDQLWETTMNPDNRVIVQIKIEDAERADEAFSILMGEQVEPRRQFIV 652
Query: 697 NAANLVNLD 705
A NLD
Sbjct: 653 KNAKFANLD 661
>gi|422339824|ref|ZP_16420781.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370667|gb|EHG18047.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 635
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 315/642 (49%), Positives = 428/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYRKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G+ ++QKY RGKP + ++ +D GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKAGVIHYQKYHRGKPEEDV--KIIGSCDEDEHGTIVRFKADTEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDK 305
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEDT 234
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFYISSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 293
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 353
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 473
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PP
Sbjct: 474 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPP 532
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 533 LYKVSSGKQIVYAYNDLELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 593 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|365838869|ref|ZP_09380126.1| DNA gyrase, B subunit [Anaeroglobus geminatus F0357]
gi|364566379|gb|EHM44071.1| DNA gyrase, B subunit [Anaeroglobus geminatus F0357]
Length = 605
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/611 (51%), Positives = 430/611 (70%), Gaps = 30/611 (4%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
+F +YG+EQIQVLEGLEAVRKRP MYIGST +GLHHLVYE++DN++DEA AGY
Sbjct: 9 SFMSEKKKSSYGAEQIQVLEGLEAVRKRPGMYIGSTSLKGLHHLVYEVVDNSIDEALAGY 68
Query: 127 ASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
A++IEV + ADNS IP+ +H K A+E VLTVLHAGGKFGG GY +SG
Sbjct: 69 ATHIEVTIEADNSVTVIDNGRGIPVAMH-KIGKPAIEVVLTVLHAGGKFGGE--GYPISG 125
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
GLHGVG+SVVNALSE ++ V RDG ++ ++RG L V P+++ D +GT++ F
Sbjct: 126 GLHGVGISVVNALSEQTKIEVKRDGYLWNIAFARGLTTKPLQ-KVRPLEAGDERGTKVWF 184
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
PD ++F +D T+ R+RELAFLN LTI L +D K++ Y + GGL+ +
Sbjct: 185 KPDPEIFPDT-AYDFETLRIRLRELAFLNKGLTITL----TDKRKDRKEVYHYEGGLKSF 239
Query: 298 VQWLNTDKKPLHDVV----GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 353
V++LN ++ P++ V G + D I +D+ALQ+ +D YS+ +L + N+I T +GGTH
Sbjct: 240 VEFLNENRNPVNSTVISLEGIKND---IIVDIALQY-NDGYSENILTFVNNIFTEEGGTH 295
Query: 354 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
+ G ++ LTRT+N G+ S +K+ + +LSGE VREGLT IISV+V P+FEGQTKT+LG
Sbjct: 296 LSGFRSGLTRTINDYGRSSGIIKENEENLSGEDVREGLTAIISVKVREPQFEGQTKTKLG 355
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
N EV+ +VD + + L + E +P +I++K+++A +A AA++AR+L R+K+ L S
Sbjct: 356 NSEVKGIVDNIISDGLNQTFEENPSEAKAIVNKNINAARARQAARKARELTRRKNALEIS 415
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
SLPGKLADCS P+ +EI++VEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE+ +
Sbjct: 416 SLPGKLADCSEKDPDRTEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKIINVEKARLDKI 475
Query: 534 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
NEEI+ +I A G G+ GE+F E RY KIII+TDADVDGAHIRTLLLTFFYR+ K L
Sbjct: 476 LANEEIRAMITAFGTGI-GEEFDIEKRRYDKIIIMTDADVDGAHIRTLLLTFFYRFMKPL 534
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVKSSFPSNALYSIQRFKGLGEMMPVQ 652
+G +Y+ PPLY+V +G+ + Y Y D ELK K++ N + +QR+KGLGEM P Q
Sbjct: 535 ITKGHVYIAQPPLYQVRKGRSIWYLYTDDELKSKIEEVGGDNTV--VQRYKGLGEMNPEQ 592
Query: 653 LWETTLNPEQR 663
LWETT++P+ R
Sbjct: 593 LWETTMDPQFR 603
>gi|190710549|gb|ACE95105.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 321/635 (50%), Positives = 430/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NA S LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NAPSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|335048216|ref|ZP_08541236.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
gi|333758016|gb|EGL35574.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
Length = 638
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/646 (48%), Positives = 441/646 (68%), Gaps = 30/646 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++ I+VL GLE VR RP MYIGSTG +GLHHLVYE++DN++DEA AG I V +
Sbjct: 7 RNYGAKDIKVLTGLEPVRLRPGMYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTI 66
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+++HP T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+S
Sbjct: 67 FEDNSVRVEDNGSGIPVEVHPQTGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L V RDG Y Q++SRG + L V + GT I F PD ++F
Sbjct: 125 VVNALSEWLIANVKRDGKLYEQQFSRGNATSKLEV----VGTSKETGTIITFKPDSEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 304
T I ++ + R RE+AFLN + I E D + E F + GG++ +V+++N +
Sbjct: 181 TTI-YEKEILRNRFREMAFLNKGVKIIFTDERED-----FTETFHYEGGIKSFVEYMNRN 234
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH +V+ F+ +++++Q+ +D YS+ +L +AN+I T +GG+H+ G K +LTR
Sbjct: 235 KNSLHSEVIYFQGQRGDSQVEISMQY-TDGYSENVLTFANNIHTPEGGSHLVGFKTALTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN G+K +KDKD +L G+ REGLT I+S+++PNP+FEGQTK +LGN E R +V+
Sbjct: 294 TLNDYGRKYNLIKDKDANLQGDDTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVEA 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ + L +LE +P V I+ K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC
Sbjct: 354 FLYDNLMTFLEENPKVGKIIIEKAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQ 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ +EI++VEGDSAGGSAKQGRD +FQA+LPL+GKI+NVE+ + EEI+++I
Sbjct: 414 ESDISVNEIYLVEGDSAGGSAKQGRDSKFQAVLPLKGKIMNVEKARIDKILGYEEIKSMI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G+DF + LRY KI+I+TDADVDGAHIRTL+LTFFYRY K L ++G +Y+
Sbjct: 474 TAFGTGI-GKDFNLDNLRYGKIVIMTDADVDGAHIRTLILTFFYRYMKELIEQGHVYIAQ 532
Query: 604 PPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY + +G K V+YC+ D EL+ ++ + IQR+KGLGEM P QLWETT+NPE
Sbjct: 533 PPLYGIIKGVKVVKYCWTDEELQASLDELGRDS-HRIQRYKGLGEMNPAQLWETTMNPEN 591
Query: 663 RMLKQLVIEDAAEANV--VFSSLMGARVDTRKELI-QNAANLVNLD 705
R+ Q+ I+D ++ FS+LMG +V+ R+E I QNA + N+D
Sbjct: 592 RLFLQVNIDDEELVSIDETFSTLMGDKVEPRREFIEQNAKYVENID 637
>gi|6006289|dbj|BAA84773.1| DNA gyrase B subunit [Bacteroides fragilis]
Length = 653
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/658 (47%), Positives = 438/658 (66%), Gaps = 30/658 (4%)
Query: 69 KENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++NP + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY
Sbjct: 4 EQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYC 63
Query: 128 SNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+IEV + DNSI P+D H KSALE +TVLHAGGKF S Y VSGG
Sbjct: 64 DHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGG 121
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V D GT+ +FW
Sbjct: 122 LHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYP----VKEVGIADHTGTKQQFW 177
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEE 296
PD +FT I +D+ +A R+RELA+LN L I+L R+ ++ ++ ++ GL E
Sbjct: 178 PDDSIFTETI-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKHETFYSEEGLRE 236
Query: 297 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V+++ + ++ L +DV+ + I I++A+ + + +S+ + Y N+I TI+GGTH+
Sbjct: 237 FVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-GFSENIHSYVNNINTIEGGTHLA 295
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G + +LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN
Sbjct: 296 GFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNN 355
Query: 416 EVRKVVD-QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV V+ + E L YLE HP +I+ K + A A AA++AR++V++KS +
Sbjct: 356 EVNGVLPIRRYGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGG 415
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+
Sbjct: 416 LPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKAL 475
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQ 590
++EEI+N+ ALG+ + E+ K A LRYHKIII+TDADVDG+HI TL++TFF+RY
Sbjct: 476 ESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYM 535
Query: 591 KTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGE 647
+ G +Y+ PPLY ++GK +YC+ DA+ +K ++ NA+++ QR+KGLGE
Sbjct: 536 PQIIQNGYLYIATPPLYLCKKGKIEEYCWTDAQRQKFIDTYGGGSENAIHT-QRYKGLGE 594
Query: 648 MMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 595 MNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANID 652
>gi|15672887|ref|NP_267061.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|385830443|ref|YP_005868256.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|418038398|ref|ZP_12676730.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723837|gb|AAK05003.1|AE006324_6 DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|326406451|gb|ADZ63522.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|354693409|gb|EHE93178.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672965|dbj|BAL50856.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis IO-1]
Length = 651
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/649 (48%), Positives = 444/649 (68%), Gaps = 25/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS L+VTV +DG +Y+Q+Y RG L + DR+GT + F PD ++
Sbjct: 129 SSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKI----IGETDRRGTTVHFVPDPEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 304 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRSL 482
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 FTAMGTGF-GADYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIA 541
Query: 603 VPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWET 656
PP+Y ++ G + + E L++ + + ++QR+KGLGEM QLW+T
Sbjct: 542 QPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWDT 601
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 602 TMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|323487683|ref|ZP_08092941.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2]
gi|323398417|gb|EGA91205.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2]
Length = 642
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/650 (49%), Positives = 430/650 (66%), Gaps = 21/650 (3%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A +E + ++Y + QIQVLEGLEAVRKRP MYIGSTG RGLHHLV+EI+DN++DEA AG+
Sbjct: 2 AMEEKGLQESYEASQIQVLEGLEAVRKRPGMYIGSTGARGLHHLVWEIVDNSIDEALAGH 61
Query: 127 ASNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
+ I V++ DN IP+ + + A+E ++TVLHAGGKFGG S
Sbjct: 62 CTEIRVSIEPDNWIRVEDNGRGIPVGMQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG- 120
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
LHGVG SVVNALSE+ EV V RD ++ K+ RG L + D GT IRF
Sbjct: 121 -LHGVGASVVNALSETTEVYVNRDEKRHYIKFERGAVTEELNV----IGDSDHTGTTIRF 175
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D ++F ++ + + R+RELA+LN L I ++ E EK + Y F GG++ Y
Sbjct: 176 KADAEIFKETTVYEFDILDHRLRELAYLNRGLKIVVKDEREGEEKEKI--YHFEGGIKSY 233
Query: 298 VQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V+ LN K PLH+ F + DGIT+++A+Q+ + Y+ + +AN+I T +GGTH G
Sbjct: 234 VEHLNKSKDPLHEEAIFVEAERDGITVEVAMQYNA-GYAANIFSFANNINTHEGGTHESG 292
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N G+K +K++D++L+G+ VREGLT IISV+ P+P+FEGQTKT+LGN E
Sbjct: 293 FKTALTRVVNDYGRKKSMLKEQDLNLTGDDVREGLTAIISVKHPDPQFEGQTKTKLGNTE 352
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V +V+ +L +P V I+ K + A A +AAK+AR+ R+KSVL SSLP
Sbjct: 353 VSTIVNNLFSNGFERFLLENPAVSKKIVEKGIMASHARMAAKKAREFTRRKSVLEVSSLP 412
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P+ SEI+IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N
Sbjct: 413 GKLADCSSRDPKISEIYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILTN 472
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+EI+N+I ALG G+ GE+F E RYHKI+I+TDADVDGAHIRTLLLTF +RY + L +
Sbjct: 473 DEIRNIITALGTGI-GEEFNLEKARYHKIVIMTDADVDGAHIRTLLLTFLFRYMRPLLEA 531
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPL+++++GK V+Y Y DA+LK + +IQR+KGLGEM QLW+T
Sbjct: 532 GYIYIAQPPLFQIKQGKHVEYVYTDAQLKTALENLSPTPKPNIQRYKGLGEMNATQLWDT 591
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T++P+ R L Q+ + DA A+ F LMG V+ R+ I +NA + NLD
Sbjct: 592 TMDPDVRTLLQVTLNDAMVADETFHILMGDEVEPRRNFIEENAKYVKNLD 641
>gi|340350611|ref|ZP_08673590.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|445114741|ref|ZP_21378019.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
gi|339607607|gb|EGQ12539.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|444840613|gb|ELX67641.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
Length = 656
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/653 (48%), Positives = 431/653 (66%), Gaps = 32/653 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINE 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSVTVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS ++ V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 129 NALSSHMKSQVFRNGKIYQQEYEQGKPLYPVKV----VGETDKTGTRQQFWPDGSIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 306
I F + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 185 I-FQWDIVARRMRELAFLNAGIKITLTDLRPNTEGKTRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YNENIHSYVNNINTIEGGTHLTGFRTALTRTL 302
Query: 366 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADNDPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLAD 422
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N
Sbjct: 423 CSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMN 482
Query: 542 LIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+++G+ GV+GE DF+ E LRY KIII+TDADVDG+HI TL++T FYRY + +E
Sbjct: 483 IIQSIGVRFGVEGESDFEANTEKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEE 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLYK K +YCY + + L K N QR+KGLGEM P Q
Sbjct: 543 GHLYIATPPLYKCTYKKVSEYCYTEQQRLQFLDKYAGGDEENKAVHTQRYKGLGEMNPEQ 602
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++P+ R+LKQ+ IE+A+ A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 603 LWETTMDPKTRLLKQVTIENASTADEMFSMLMGDDVEPRREFIEQNATYANID 655
>gi|256838953|ref|ZP_05544463.1| DNA gyrase, B subunit [Parabacteroides sp. D13]
gi|262382583|ref|ZP_06075720.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B]
gi|410104251|ref|ZP_11299165.1| DNA gyrase, B subunit [Parabacteroides sp. D25]
gi|423333431|ref|ZP_17311212.1| DNA gyrase, B subunit [Parabacteroides distasonis CL03T12C09]
gi|256739872|gb|EEU53196.1| DNA gyrase, B subunit [Parabacteroides sp. D13]
gi|262295461|gb|EEY83392.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B]
gi|409228311|gb|EKN21203.1| DNA gyrase, B subunit [Parabacteroides distasonis CL03T12C09]
gi|409234652|gb|EKN27479.1| DNA gyrase, B subunit [Parabacteroides sp. D25]
Length = 651
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/650 (47%), Positives = 433/650 (66%), Gaps = 26/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y ++ IQVLEGLEAVRKRP+MYIG T +GLHHLVYE++DN++DEA AGY + I+V
Sbjct: 9 STEYSADSIQVLEGLEAVRKRPSMYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVV 68
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+H KSALE VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 69 INEDNSITVTDDGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGV 126
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L+ V R+G + Q++S GKP+ + +D+ D+ GT I F PD +F
Sbjct: 127 SCVNALSTYLKAEVRRNGKVHMQEFSCGKPLHDVQV----IDNTDKTGTTISFKPDGSIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLN 302
T ++ ++ +A R+RELAFLN +T+ L + E + F GL+E+V++++
Sbjct: 183 TVT-EYKYDILATRLRELAFLNAGITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYID 241
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ L DV+ + GI +++AL + + +Y++++ Y N I TI+GGTH+ G + L
Sbjct: 242 RSKEKLIPDVIHIVTEKQGIPVEVALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGL 300
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTL + SK ++ + + G+ REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 301 TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAV 360
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D ++ E L YLE HP I+ K + A +A AA++AR+LV++KS L LPGKLAD
Sbjct: 361 DMAIGEALGYYLEEHPKEAKIIVDKVILAAQARHAARKARELVQRKSPLTGGGLPGKLAD 420
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + ++++EEIQN
Sbjct: 421 CSSKDAAICELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQN 480
Query: 542 LIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ RA+G+ V ED K E LRYHK+II+TDADVDG+HI TL+LTFF+R ++L + G
Sbjct: 481 IYRAMGVTVGTEDDPKALNMEKLRYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENG 540
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWE 655
+Y+ PPLY ++GK +YC+ + + ++ + SI QR+KGLGEM QLW+
Sbjct: 541 YVYLATPPLYLCKKGKVEEYCWTEQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWD 600
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R LKQ+ I++AAEA+ +F+ LMG V R+E I+ A N+D
Sbjct: 601 TTMNPENRTLKQITIDNAAEADQIFAMLMGEDVGPRREFIEENATYANID 650
>gi|448688768|ref|ZP_21694505.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
gi|445778638|gb|EMA29580.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
Length = 642
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/637 (49%), Positives = 430/637 (67%), Gaps = 24/637 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AG+ NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGHCDNIDVT 64
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISIH----DERDGETETFAYDGGIREFVEYLNET 236
Query: 305 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQAILP++GKILNVE+ + +N EI
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+NLI ALG G+ G++F + LRY KII++TDADVDGAHIRTLLLT FYR+ K L + G +
Sbjct: 476 RNLITALGTGI-GDEFDIDDLRYEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYV 534
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y PPLY++ DAE ++ +QRFKGLGEM P QLWETT+N
Sbjct: 535 YASQPPLYRIRYRGNTYDAMTDAERDRIIEEKCDGNPTQVQRFKGLGEMNPEQLWETTMN 594
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ 696
P+ R+LKQ+ IEDAA A+ +F+ LMG V+ RKE I+
Sbjct: 595 PDNRILKQITIEDAAAADKMFNILMGDAVEPRKEFIK 631
>gi|448540821|ref|ZP_21623742.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|448549124|ref|ZP_21627900.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|448555702|ref|ZP_21631631.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
gi|445708974|gb|ELZ60809.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|445713813|gb|ELZ65588.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|445717225|gb|ELZ68943.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
Length = 639
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/635 (50%), Positives = 430/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFELGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISLTDERTD----ESSTFRFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDNVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|237741012|ref|ZP_04571493.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13]
gi|229431056|gb|EEO41268.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13]
Length = 635
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/646 (48%), Positives = 429/646 (66%), Gaps = 29/646 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVIDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G ++QKY RGKP + ++ + GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTIHYQKYHRGKPEEDV--KIIGACDVNEHGTIVRFKADAEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-- 304
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDT 234
Query: 305 ---KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+KP + + D + +D+ + + + ++ + + N+I T +GGTH++G + +L
Sbjct: 235 TIIEKPFY----VSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTAL 289
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T+ +N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V
Sbjct: 290 TKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIV 349
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLAD
Sbjct: 350 NTIVSNSLKIFLEDNPNITKVIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLAD 409
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C+S EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+
Sbjct: 410 CTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRA 469
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
++ A G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+
Sbjct: 470 MVTAFGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYI 528
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP
Sbjct: 529 ACPPLYKVASGKQIVYAYNDLELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNP 588
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ R+L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 589 DGRLLLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|300774234|ref|ZP_07084101.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
gi|300758913|gb|EFK55742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
Length = 652
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/660 (47%), Positives = 448/660 (67%), Gaps = 34/660 (5%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E + TY ++ IQVLEGLEAVRKRP+MYIG TG +GLHHLVYE++DN++DEA AGY +
Sbjct: 3 EEKKNTSTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGYCN 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I V + NSI P ++ NKSALE V+TVLHAGGKF + Y VSGGL
Sbjct: 63 DILVTIHEGNSISVQDNGRGIPTGINKKENKSALELVMTVLHAGGKFDKDT--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS L V RDG + Q+Y +GKP V + +R GT + F+P
Sbjct: 121 HGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKP----KYDVKAIGESERTGTTVTFFP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D ++FT ++++T++ R+RELAFLN +LTI +E D + + +F GGL+E+
Sbjct: 177 DPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIVDEREILDDGSFRKDVFFSEGGLQEF 236
Query: 298 VQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 353
V++L+ +++ L V G ++ G+ ++LALQ+ +D YS+ + Y N+I TI+GG+H
Sbjct: 237 VKFLDGNRQSLISNPIYVEGIKQ---GVPVELALQY-NDTYSENVHSYVNNINTIEGGSH 292
Query: 354 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
+ G + LTRTL + S +K+ + ++G+ REGLT +ISV+V P+FEGQTKT+LG
Sbjct: 293 VAGFRRGLTRTLKKYAEDSGLLKNLKVEIAGDDFREGLTAVISVKVAEPQFEGQTKTKLG 352
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
N EV VD +V E L+ YLE +P I+ K + A +A AA++AR++V++K+V+ S
Sbjct: 353 NNEVMGAVDVAVGEILSTYLEENPREAKMIVQKVVIAAQARAAARKAREMVQRKTVMGGS 412
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
LPGKLADCS P + EIF VEGDSAGG+AKQGRDR+FQAI+PLRGKILNVE+ E +
Sbjct: 413 GLPGKLADCSDNDPHKCEIFFVEGDSAGGTAKQGRDRKFQAIMPLRGKILNVEKAMEHKI 472
Query: 534 YKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
Y+NEEI+N+ ALG+ V D K E LRYHKI+I+TDADVDG+HI TL+LTF++RY
Sbjct: 473 YENEEIKNMFTALGVSVGTADDAKALNLEKLRYHKIVIMTDADVDGSHIATLILTFYFRY 532
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGL 645
K L + G +Y+ PPLY V++GK+ +Y + + + ++++K + ++++ +QR+KGL
Sbjct: 533 MKELIENGYVYIATPPLYLVKKGKESEYAWTEEQRLQAIQRLKGAGKEDSVH-VQRYKGL 591
Query: 646 GEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
GEM QLW+TT+NPE R L+Q+ I++AAE + +FS LMG V R+E I+ A +D
Sbjct: 592 GEMNAEQLWDTTMNPEHRTLRQVTIDNAAECDRIFSMLMGDEVAPRREFIEKNARYAKID 651
>gi|124485239|ref|YP_001029855.1| DNA gyrase subunit B [Methanocorpusculum labreanum Z]
gi|124362780|gb|ABN06588.1| DNA gyrase subunit B [Methanocorpusculum labreanum Z]
Length = 651
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 327/664 (49%), Positives = 440/664 (66%), Gaps = 45/664 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + I VLEGL VR+RPAMYIGST RGLHHLVYE++DN++DEA AG+ +I +
Sbjct: 1 MTDNYDASHITVLEGLTPVRERPAMYIGSTDTRGLHHLVYEVVDNSIDEALAGFCKHIVI 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ + S IP+D+ P NKSALE V+TVLHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 IINPNGSVSVEDDGRGIPVDIMPKQNKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC-------HVLPVDSKDRQG---- 232
+SVVNALS L V+RDG Y + +G + LT ++L D++G
Sbjct: 119 VSVVNALSTRLTAEVYRDGNIYSMVFGKGVLLQPLTSRPETDEEYLLRQKRLDKEGQPKE 178
Query: 233 ----TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQY 285
TRI F+PD +F T +FD++ +A R RELA+LN L I + R DSD
Sbjct: 179 TTTGTRITFYPDGSIFETT-EFDYDVLAHRFRELAYLNKGLEIHVEDHRTGDSDT----- 232
Query: 286 NEYFFAGGLEEYVQWLNTDKKPLHD---VVGFRKDVDGITIDLALQWCSDAYSDTMLGYA 342
+ + GGL ++V LN K+ LH V DV+ I +++ALQ+ +D Y + + Y
Sbjct: 233 --FCYEGGLRQFVAHLNEGKELLHPEPIYVDKSDDVNKIEVEVALQY-NDTYGEILYTYV 289
Query: 343 NSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNP 402
NS+ T +GGTH+EG +++LTR +N++ +K +K+ D+S+ GE VREGLT +ISV++ NP
Sbjct: 290 NSVNTREGGTHLEGFRSALTRAINNIAHANKHLKE-DVSVRGEDVREGLTAVISVKIANP 348
Query: 403 EFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARD 462
+FEGQTK RLGN V+ +VD + + LTE+ E +P V+ +I KSL A A AA+RA++
Sbjct: 349 QFEGQTKMRLGNSNVKGLVDSMMYQALTEFFEENPKVIAAIAKKSLDAANAREAARRAKE 408
Query: 463 LVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKI 522
L R+K+ L S LPGKLADCS P +SEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI
Sbjct: 409 LARRKTSLEMSGLPGKLADCSERDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKI 468
Query: 523 LNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL 582
LNVE+ E KN EIQ LI A+G G G+ F E RYH I+I+TDADVDGAHIR LL
Sbjct: 469 LNVEKALEHKALKNAEIQTLITAIGAGY-GDKFDAERARYHHIVIMTDADVDGAHIRILL 527
Query: 583 LTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRF 642
LTFFYR+ K L + G IY+ PPL+++ +GKQ +Y Y + +++ + + + S+QR+
Sbjct: 528 LTFFYRFMKPLVEMGYIYIAQPPLFRIAKGKQEKYVYTEEDMRLAIAEYGEKGI-SVQRY 586
Query: 643 KGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANL 701
KGLGEM QLW TT+NPE R+LKQ+ IEDA+ AN +F LMG V RK+ I+ +A +
Sbjct: 587 KGLGEMNAGQLWNTTMNPEFRILKQVRIEDASYANEIFEKLMGDDVMPRKDFIKRHAGEV 646
Query: 702 VNLD 705
NLD
Sbjct: 647 KNLD 650
>gi|253573849|ref|ZP_04851191.1| DNA gyrase, B subunit [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846326|gb|EES74332.1| DNA gyrase, B subunit [Paenibacillus sp. oral taxon 786 str. D14]
Length = 636
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/645 (50%), Positives = 437/645 (67%), Gaps = 29/645 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY IQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGYA+ I+V +
Sbjct: 6 QTYDESNIQVLEGLEAVRKRPGMYIGSTSVRGLHHLVWEVVDNSIDEALAGYANKIDVTV 65
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+ ++ KS LE V+TVLHAGGKFGG S LHGVG+S
Sbjct: 66 HPDNSVTVEDNGRGIPVGMNEKLQKSTLEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS + V V RDG Y Q+Y RG P V + GT+ F+PD ++FT
Sbjct: 124 VVNALSTKVIVEVKRDGHIYQQEYHRGTP----QYDVRVIGDTTETGTKTTFYPDPEIFT 179
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
FD+NT+ RIRELAFLN + I+L +D Q + + GG+ EYV++LN ++
Sbjct: 180 ETTVFDYNTLLTRIRELAFLNKGINISL----TDERTGQSESFHYEGGIMEYVRFLNQNR 235
Query: 306 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ LH+ V G R D I ++++LQ+ +D Y++ + +AN+I T +GGTH G K++L
Sbjct: 236 EVLHEEPIYVEGQR---DMIQVEISLQY-NDGYTENIYSFANNIHTHEGGTHESGFKSAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +K+ +K+ D +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRIINDYARKTGMIKENDSNLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIV 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ E L E+++ +P V IL KSL A +A AA++AR+L R+KS L S+LPGKLAD
Sbjct: 352 ESLFAEKLQEFMDENPSVSRRILEKSLQASRAREAARKARELTRRKSALEVSALPGKLAD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+
Sbjct: 412 CSSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILGNAEIRA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLLLTFF+RY + + + G +Y+
Sbjct: 472 IITALGTGI-GEDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRKIIEAGYVYI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPL+K+ER K V+Y + E ++ + F A ++QR+KGLGEM QLWETT++PE
Sbjct: 531 AQPPLFKIERNKVVRYANSEKERDQIIAEFGEGAKVNVQRYKGLGEMNAEQLWETTMDPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R+++Q+ I DA +A+ +F +LMG V+ R+E I A V NLD
Sbjct: 591 SRVMQQVSISDAIQADAIFDTLMGDNVEPRREFIHEHAKYVKNLD 635
>gi|299820837|ref|ZP_07052726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM
20601]
gi|299817858|gb|EFI85093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM
20601]
Length = 646
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 430/643 (66%), Gaps = 27/643 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ S IE+ +
Sbjct: 16 YNDDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCSEIEITIEE 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKVGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG +Y+Q++ +G V + D +GT + F PD ++FT
Sbjct: 134 NALSTDLEVYVHRDGQKYYQRFEQGNVVMDMEER----GETDYRGTIVHFKPDPEIFTET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
FD +T+ R RELAFLN L I++ ED E +Y + GG+ YV+ LN K+
Sbjct: 190 TVFDFDTLRTRARELAFLNKNLRISI--EDKREEHQVRKDYHYEGGIRSYVEHLNKSKEV 247
Query: 308 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+H+ + G R+D I +++++Q+ + ++ ++ +AN+I T +GGTH G K +LTR
Sbjct: 248 IHEPPIYLEGERED---IMVEISMQYNT-GFASNLISFANNIHTYEGGTHESGFKTALTR 303
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +++K KD D +LSGE VREGLT IIS++ PNP+FEGQTKT+LGN E R + D+
Sbjct: 304 VINDYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPNPQFEGQTKTKLGNSEARTITDK 363
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E L +++ +PDV I+ K + A +A +AAKRARD+ R+ S L S+LPGKLADCS
Sbjct: 364 LFSEALNKFMMENPDVGKKIVEKGVVASRARMAAKRARDVARKTSGLEISNLPGKLADCS 423
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ +
Sbjct: 424 SRNPEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDKILANEEIRTIF 483
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+
Sbjct: 484 TAMGTGFGG-DFNVAKARYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQ 542
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+++ GK+V+Y Y D +L +S S+ Y+IQR+KGLGEM P QLWETT+NPE R
Sbjct: 543 PPLYQIKHGKEVEYVYTDKQLDDYLASIGSDTKYAIQRYKGLGEMNPEQLWETTMNPEHR 602
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
L Q+ I DA +A+ F LMG RV+ R++ I +NA + NLD
Sbjct: 603 TLLQVNINDAIDADETFEMLMGDRVEPRRKFIEENAQYVKNLD 645
>gi|406968684|gb|EKD93488.1| hypothetical protein ACD_28C00141G0005 [uncultured bacterium]
Length = 639
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 331/646 (51%), Positives = 439/646 (67%), Gaps = 25/646 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +YG+E IQVLEGLEAVRKRP MYIG+T GLHHL++E++DNA+DEA AG+ +NI+
Sbjct: 6 PAANSYGAEHIQVLEGLEAVRKRPGMYIGTTDVAGLHHLIWEVVDNAIDEAIAGHCNNID 65
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V L AD S IP+D+HP T KS LETVLTVLHAGGKFGG S LHGV
Sbjct: 66 VTLHADGSASILDDGRGIPVDVHPKTGKSTLETVLTVLHAGGKFGGGGYKVSGG--LHGV 123
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDK 241
G SVVNALS L V+RDG Y Q+Y G P + + VD K GT IRFWPDK
Sbjct: 124 GASVVNALSSKLVAEVYRDGKRYVQEYQYGAP-----QYEIKVDGKSTSTGTLIRFWPDK 178
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD-PEKNQYNEYFFAGGLEEYVQW 300
+F +F+ TI R+R+ A+L +TI R E + P + Q+ +F GG++ YV
Sbjct: 179 GIFEIT-EFNPQTILNRLRQQAYLTKGITIRFRDERVESPSRYQF---YFEGGIKSYVLH 234
Query: 301 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
LN K+ + +VV K+V I++A Q+ + ++ + + +AN+I T +GG H+ G +++
Sbjct: 235 LNKSKEVIGEVVYLDKEVPEGMIEIAFQY-NQSFQECIFTFANTIHTPEGGMHLTGFRSA 293
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N+ +K+ +K+K+ +L E VREGLT +ISV++P+P+FEGQTK++LGNPE+R
Sbjct: 294 LTRVINAYARKNNLLKEKEDNLMAEDVREGLTVVISVKLPDPQFEGQTKSKLGNPEIRTA 353
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+ E+L EYLE +P+ I++K A +A LAA+ ARD V +K L +LPGKLA
Sbjct: 354 VETVFGEFLQEYLEENPNHGKEIIAKCSLAARARLAARAARDTVIRKGALEGMTLPGKLA 413
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P SE++IVEGDSAGGSAKQGR+R QAILPLRGKILNVE + N EI+
Sbjct: 414 DCSSKDPSNSELYIVEGDSAGGSAKQGRNRENQAILPLRGKILNVEHARMDRILGNNEIK 473
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
LI ALG+G+ GE F LRY +I+I+TDADVDGAHIRTLLLT FYRY KTL +EG +Y
Sbjct: 474 ALIIALGVGI-GEFFDLGRLRYDRIVIMTDADVDGAHIRTLLLTLFYRYFKTLIEEGHLY 532
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYK+ +GK+++YCY D + + +F +IQR+KGLGEM P QLWETT+NP
Sbjct: 533 IAQPPLYKLSQGKRLEYCYTDEQKEVQMKTFSDTMKINIQRYKGLGEMNPEQLWETTMNP 592
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
E RM+ ++ I+DA A+ VF +LMG+ V RK+ IQ A V NLD
Sbjct: 593 ETRMMLRVSIDDAERADKVFDTLMGSEVLPRKKFIQAHAKQVRNLD 638
>gi|255038730|ref|YP_003089351.1| DNA gyrase subunit B [Dyadobacter fermentans DSM 18053]
gi|254951486|gb|ACT96186.1| DNA gyrase, B subunit [Dyadobacter fermentans DSM 18053]
Length = 651
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/649 (48%), Positives = 437/649 (67%), Gaps = 28/649 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG TG +G+HHL++E++DN++DEA AGY I V +
Sbjct: 11 SYSAENIQVLEGLEAVRKRPAMYIGDTGFKGVHHLIWEVVDNSIDEAMAGYCDTINVTVE 70
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+NSI P +HP NKSALE VLTVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 71 KNNSITVKDNGRGIPTGMHPKENKSALEVVLTVLHAGGKFDKDT--YKVSGGLHGVGVSC 128
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L V R+G + Q++S GKP+ + ++ GT I F PD +FT
Sbjct: 129 VNALSIHLRAEVHREGKIFEQEFSEGKPLYPTRV----IGDSEKTGTIIHFLPDATIFTV 184
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 304
++ + TIA R+REL++LN + I L + + E Q+ E++ GL E+V +L+
Sbjct: 185 T-EYKYETIATRLRELSYLNKGIRITLEDKREEDENGQFRGEEFYSEVGLNEFVTYLDAT 243
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++PL + + D I +++A+ + + +YS+ + Y N+I TI+GGTH+ G +A+LTR
Sbjct: 244 RQPLIPEPIHMENDKGVIPVEVAMMYNT-SYSENVFSYVNNINTIEGGTHVSGFRAALTR 302
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + +KS + + + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV V Q
Sbjct: 303 TLKNYAEKSGILAKEKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTAAVSQ 362
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V E L YLE HP I+ K + A KA +AAK+AR++V++K++L + LPGKL+DCS
Sbjct: 363 VVAEMLENYLEEHPKEARVIIDKVILAAKARIAAKKAREMVQRKNILTGTGLPGKLSDCS 422
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
T P E+++VEGDSAGG+AKQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+
Sbjct: 423 ETDPNVCELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAQEYKIYENEEIKNMF 482
Query: 544 RALGLGVKGEDFKKEA-----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
A+G+ + G+D + A LRYHKI+I+TDAD+DG+HIRTL+LTFF+RY K L D G
Sbjct: 483 TAMGVQI-GKDGDERALNIDKLRYHKIVIMTDADIDGSHIRTLILTFFFRYMKILIDNGY 541
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWET 656
IY+ PPLY V++GK+ +YC+ + + ++ + S +QR+KGLGEM QLWET
Sbjct: 542 IYIAQPPLYLVKKGKEERYCWTEQQREEAIREIGAGKEDSVNVQRYKGLGEMNAEQLWET 601
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T+NPE+R LKQ+ +E AAEA+ +FS LMG V R++ I+ A +D
Sbjct: 602 TMNPERRSLKQVSVESAAEADHLFSMLMGDEVAPRRDFIEKNAKYARVD 650
>gi|387132329|ref|YP_006298301.1| DNA gyrase subunit B [Prevotella intermedia 17]
gi|386375177|gb|AFJ09678.1| DNA gyrase, B subunit [Prevotella intermedia 17]
Length = 656
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/654 (48%), Positives = 431/654 (65%), Gaps = 32/654 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 DDNSITVEDNGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 128 VNALSSHMMSQVFRNGKIYQQEYEQGKPLYPVKI----VGDTDKTGTRQQFWPDASIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
+ F + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 184 TV-FQWDIVARRMRELAFLNAGIKITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G +A+LTRT
Sbjct: 243 THLFDDVIYLKTEKQGIPIEVAVMYNTD-YNENIHSYVNNINTIEGGTHLTGFRAALTRT 301
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L S +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKSYADNEPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 362 VQQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P+E EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 422 DCSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVM 481
Query: 541 NLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV GE DF+ + LRY KIII+TDADVDG+HI TL++T FYRY + +
Sbjct: 482 NIIQSIGVRFGVDGESDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIE 541
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPV 651
EG +Y+ PPLYK K +YCY + + L+K N QR+KGLGEM P
Sbjct: 542 EGHLYIATPPLYKCTYKKVSEYCYTEQQRLQFLEKYAGGDEENKAVHTQRYKGLGEMNPE 601
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+A+ A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 QLWETTMDPKTRLLKQVTIENASTADEMFSMLMGDDVEPRREFIEQNATYANID 655
>gi|149182285|ref|ZP_01860764.1| DNA gyrase subunit B [Bacillus sp. SG-1]
gi|148849977|gb|EDL64148.1| DNA gyrase subunit B [Bacillus sp. SG-1]
Length = 638
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 439/647 (67%), Gaps = 22/647 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E ++Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S
Sbjct: 2 EQEQRQSYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSE 61
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I+V++ DNSI P+ +H + A+E ++TVLHAGGKFGG S LH
Sbjct: 62 IKVSIEKDNSITVQDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 119
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALS LEV V RDG ++QK+ +G P L D GT I F PD
Sbjct: 120 GVGASVVNALSTELEVFVHRDGKIHYQKFEKGVPSGDLKV----TGESDVTGTIIHFKPD 175
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++FT +++++ +A R+RELAFLN + I + ED+ E ++ NEY + GG++ YV+
Sbjct: 176 PEIFTETTEYEYDILANRLRELAFLNRGIKIII--EDNRVE-DKKNEYHYEGGIKSYVEH 232
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
LN K+ +H+ + + D I++++ALQ+ +D ++ + +AN+I T +GGTH G K
Sbjct: 233 LNRSKEVVHEEPIYIEGEKDNISVEIALQY-NDGFASNLYSFANNIHTYEGGTHESGFKT 291
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR +N +K+ K+ D +LSGE VREG+T IIS++ P+P+FEGQTKT+LGN E R
Sbjct: 292 ALTRVINDYARKNHLYKESDANLSGEDVREGITAIISIKHPDPQFEGQTKTKLGNSEART 351
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+ D E+ +L +P V ++ K L A +A LAAK+AR+L R+KS L SSLPGKL
Sbjct: 352 ITDALFSEHFESFLLENPVVARKVVDKGLMAARARLAAKKARELTRRKSALEVSSLPGKL 411
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P+ SEI+IVEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N E+
Sbjct: 412 ADCSSRDPKISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEV 471
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
+ +I ALG G+ GEDF RY K++I+TDADVDGAHIRTLLLTFFYRY + + + G I
Sbjct: 472 RAMITALGTGI-GEDFDISKARYQKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYI 530
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLY++++GK+++Y Y D +L++ + P+ IQR+KGLGEM QLWETT++
Sbjct: 531 YIAQPPLYQIKQGKKIEYVYSDKQLEEALAQMPAQPKPGIQRYKGLGEMNATQLWETTMD 590
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R L Q+ +EDA EA+ F LMG +V+ R+ I+ NAA + NLD
Sbjct: 591 PEYRTLLQVSLEDAIEADETFEMLMGDKVEPRRNFIEDNAAYVKNLD 637
>gi|329770365|ref|ZP_08261747.1| DNA gyrase subunit B [Gemella sanguinis M325]
gi|328836488|gb|EGF86148.1| DNA gyrase subunit B [Gemella sanguinis M325]
Length = 638
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/639 (48%), Positives = 437/639 (68%), Gaps = 21/639 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR RP MYIGST +GLHHLV+EI+DN++DEA AG+ I VA+
Sbjct: 10 YNADQIQVLEGLEAVRVRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGHCDTITVAIEK 69
Query: 137 DN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IPID+ T K ALE +LTVLHAGGKFGG S LHGVG SVV
Sbjct: 70 DNWIRVEDNGRGIPIDIQEQTGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +LE V RDG + + RG V +T + D+ GT IRF D ++F
Sbjct: 128 NALSTNLEAYVHRDGKIHSMMFERGDVVQGITV----IGETDKTGTTIRFKADPEIFQET 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
++++ + RIRELAFLN +TI L+ E EK + + + GGL EYV+ LN +K
Sbjct: 184 TVYEYDILRTRIRELAFLNKGITIILKDEREGQEKEE--TFCYEGGLLEYVEMLNENKDS 241
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
LH+ + +++G +++++Q+ + Y+ +L YAN+I T +GGTH G K +LTR +NS
Sbjct: 242 LHEAIYVHGEMEGKEVEISMQYNT-GYASNILSYANNINTHEGGTHESGFKTALTRIINS 300
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
GKK+K +K+K+ SL+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E
Sbjct: 301 YGKKNKLIKEKE-SLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSE 359
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
L +L +P V I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS
Sbjct: 360 ELDRFLLENPKVAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDA 419
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
E E+F+VEGDSAGGSAK GR+ +FQAILPL+GKILNVE+ + N+E+++LI A+G
Sbjct: 420 AECELFLVEGDSAGGSAKLGRNSKFQAILPLKGKILNVEKVRIDKVLSNDEVRSLITAVG 479
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
+G+ GE + LRYHKI+I+TDADVDG+HIRTLLLTFF+RY + L + G +Y+ PPL+
Sbjct: 480 MGI-GETLNIDKLRYHKIVIMTDADVDGSHIRTLLLTFFFRYMRELIEAGYVYIARPPLF 538
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
++ GK+ YC+ D ELK+ + ++ Y++QR+KGLGEM +LW+TT++PE R++ +
Sbjct: 539 GLKVGKKEYYCHTDEELKENIEKYAADKKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYK 598
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ I+DA A+ F +LMG +V+ R++ I +NA N+VNLD
Sbjct: 599 VSIDDAQRADAAFDTLMGEKVEPRRKFIEENALNVVNLD 637
>gi|189499015|ref|YP_001958485.1| DNA gyrase subunit B [Chlorobium phaeobacteroides BS1]
gi|189494456|gb|ACE03004.1| DNA gyrase, B subunit [Chlorobium phaeobacteroides BS1]
Length = 644
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/649 (47%), Positives = 429/649 (66%), Gaps = 27/649 (4%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++N + Y + IQ+L+G+E VRKRPAMYIG RGLHHL+YEI+DN++DE AGY
Sbjct: 4 IQKNTSPQAYEATNIQILDGIEHVRKRPAMYIGDLHSRGLHHLIYEIVDNSIDETLAGYN 63
Query: 128 SNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+IE++L D S IP+D+HP KSALE V+T++ AGGKF Y VSGG
Sbjct: 64 ESIELSLNPDGSVTVTDNGRGIPVDIHPQKKKSALELVMTLIGAGGKF--DKGAYKVSGG 121
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG SVVNALSE EV V+R+G + Q+Y +G P + + + GT+ F
Sbjct: 122 LHGVGASVVNALSEWCEVEVYREGNIWFQRYHKGIPQRDVEV----IGESTKTGTKTTFM 177
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
PD +F +F + + R+RELAFLN L I ++ D E + + GG++E+V
Sbjct: 178 PDPDIFKIT-EFRKDIVVDRMRELAFLNNILKIVVKDIDGSEET-----FHYEGGIKEFV 231
Query: 299 QWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
+ + ++ L + V + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G
Sbjct: 232 TFTDHNRISLLKEPVYISGERDSTVVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGF 290
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
+ +LTRTLNS +K+ +K+ +SL+G+ +EGLT IISV+V P+FEGQTKT+LGN E
Sbjct: 291 RKALTRTLNSYAQKNDLLKNLKLSLTGDDFKEGLTAIISVKVAEPQFEGQTKTKLGNSET 350
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
+ +V+ V E L+++ E +P VL +I+ K SA + AA++A+DL R+KS L SS LPG
Sbjct: 351 QSIVESIVNEQLSDFAESNPGVLKTIIEKVKSAALSRDAARKAKDLTRRKSALESSGLPG 410
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCS PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NE
Sbjct: 411 KLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENE 470
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+ +I ALG E+F E LRY KIII+TDADVDGAHIRTLLLTFF+RY ++L + G
Sbjct: 471 EIKTIILALGTSFGEEEFSVEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRSLIEAG 530
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQL 653
+++ PPLY ++ GK+ +Y +DD E ++ ++ +IQR+KGLGEM P QL
Sbjct: 531 KVFIAQPPLYLIKSGKEQKYAWDDDERNGIVESIRKKQKGRGNINIQRYKGLGEMNPEQL 590
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
W TT++PE R L Q+ +E+A EA+ VFS+LMG +V+ R+ I+ A V
Sbjct: 591 WSTTMDPEHRSLLQVSVENAMEADQVFSTLMGDKVEPRRNFIEKNARYV 639
>gi|406885538|gb|EKD32706.1| hypothetical protein ACD_76C00161G0005 [uncultured bacterium]
Length = 684
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 331/684 (48%), Positives = 435/684 (63%), Gaps = 55/684 (8%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
K+N + Y ++QI VLEGLE VR+RP MYIGSTG GLHHLV+E++DN++DEA AG+A+
Sbjct: 13 KKNAQASEYKAKQISVLEGLEPVRRRPGMYIGSTGASGLHHLVWEVVDNSIDEAMAGFAT 72
Query: 129 NIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I V LL D+ IP+D+HP KSALE VLT LHAGGKFG GY VSGGL
Sbjct: 73 DITVKLLPDSMVEVSDNGRGIPVDIHPQYKKSALELVLTKLHAGGKFG--DGGYKVSGGL 130
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+SVVNALS L V RDG + Q+YS GKP V P+ S GT I F P
Sbjct: 131 HGVGVSVVNALSSYLRAEVKRDGKLWMQEYSEGKP----KSKVKPIKSASGTGTIITFQP 186
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
D +F A +F+ TI +R+ A+L + I + E K+ Y ++F GG+ YV+
Sbjct: 187 DFTIFD-AKEFNLQTIFDHLRQQAYLTRGVKITVTDERDKKNKSVY-AFYFEGGVASYVR 244
Query: 300 WLNTDKKPLHDVVGF---RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+N KKP H+ V + D + +++ALQ+ ++ Y +++ +AN+I +GGTH+ G
Sbjct: 245 HINHGKKPKHENVFYVQKHSDEADMDVEVALQY-TEEYHESIFCFANNIFNPEGGTHLVG 303
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ + TR LN+ ++ +K+KD +L+GE VREGLT +ISV++ P+FEGQTK +LGNPE
Sbjct: 304 FRTASTRALNNYARQKGYLKEKDENLTGEDVREGLTTVISVKIKEPQFEGQTKAKLGNPE 363
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V+ E YLE HP ++I+SK + + +A AA+ ARD V +K L +LP
Sbjct: 364 ARTAVESIFGEAFETYLEEHPRDAEAIISKCVLSAQARAAARAARDTVLRKGALEGLTLP 423
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P SE+FIVEGDSAGGSAKQGRDR QAILPLRGKILNVER M N
Sbjct: 424 GKLADCSSRDPNNSELFIVEGDSAGGSAKQGRDRETQAILPLRGKILNVERSRIDKMLSN 483
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
EI++LI ALG + GE F + LRY KI+I+TDADVDGAHIRTLLLT FYR+ + L +
Sbjct: 484 TEIKSLIIALGTNI-GEMFSLDGLRYSKIVIMTDADVDGAHIRTLLLTLFYRHFQELIKQ 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYS-------------- 638
G IY+ PPLY+++ GK+ QY Y D E + K K F S A +
Sbjct: 543 GHIYIAQPPLYRIQIGKEAQYVYSDEEKQRVMDKFKKEFGSEAEITETAQQEEGEDSEEQ 602
Query: 639 -------------IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 685
IQR+KGLGEM P QLWETT+NP R++KQ+ I+DA +A+ +F LMG
Sbjct: 603 APVASSSKTPKIIIQRYKGLGEMNPDQLWETTMNPANRVIKQVTIDDAQKADEIFDILMG 662
Query: 686 ARVDTRKELIQNAANLVNLDHLDI 709
+ V+ RK+ IQ A V +HLDI
Sbjct: 663 SDVEPRKKFIQTHAKTV--EHLDI 684
>gi|373460688|ref|ZP_09552439.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
gi|371955306|gb|EHO73110.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
Length = 656
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/654 (48%), Positives = 433/654 (66%), Gaps = 34/654 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +++ V L
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVAVTLNE 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS + V+RDG Y Q+Y +GKP+ + + D++GTR +FWPD +FTT
Sbjct: 129 NALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----IGETDKRGTRQQFWPDPAIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 306
F + +A R+RELA+LN + I L + E E F A GL+E+V++++ +
Sbjct: 185 T-FKWDIVASRMRELAYLNAGIRITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 366 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KTYADAEPTIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E L+ YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLAD
Sbjct: 363 QQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLAD 422
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ P+E EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N
Sbjct: 423 CSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMN 482
Query: 542 LIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + ++
Sbjct: 483 IIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIED 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPV 651
G +Y+ PPLYK K +YCY + + K V+ AL++ QR+KGLGEM P
Sbjct: 543 GHLYIATPPLYKCSYKKVSEYCYTEQQRQAFIDKYVEGKEDDKALHT-QRYKGLGEMNPE 601
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P R+LKQ+ I++AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 QLWETTMDPSSRLLKQVTIQNAAEADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|359688817|ref|ZP_09258818.1| DNA gyrase subunit B [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418749228|ref|ZP_13305520.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
gi|418757357|ref|ZP_13313545.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384117028|gb|EIE03285.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404276297|gb|EJZ43611.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 308/642 (47%), Positives = 432/642 (67%), Gaps = 24/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ ++I +++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTDITISIL 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+ +HP N S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIIEVKDNGRGIPVAIHPEKNISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSESLEV V+++G + QKYSRG P+ + + +GT +RF PD +FTT
Sbjct: 125 VNALSESLEVEVYQNGKIHQQKYSRGIPLGPVNV----IGDTTERGTVVRFKPDATIFTT 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+F + + R RELAFLN L + ++ K D EK+ E+ F GG+ +V++LN +K
Sbjct: 181 T-EFHFDVLTSRFRELAFLNKGLKLIVQDKRKPDSEKH---EFLFDGGIVSFVEYLNENK 236
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
PLH + F ++ D + ++A+Q+ SD YS+ + + N+I GGTH+EG +A+LTRTL
Sbjct: 237 HPLHKTIHFERNKDDVVAEIAIQY-SDTYSENIFCFTNNINNNLGGTHLEGFRAALTRTL 295
Query: 366 NSLGKKSKT-VKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N KK + VK + +LSGE ++EG+T +ISV++P P+F QTK +L N E++ ++
Sbjct: 296 NDFLKKDQQLVKKQPTALSGEDLKEGITAVISVKIPQPQFNSQTKEKLVNAEIKGIMQTL 355
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E L+ + E +P + IL K + + KA AA++ARDL R+KSVL LPGKLADCS
Sbjct: 356 TGEGLSLFFEENPAITKKILEKCILSAKAREAARKARDLTRRKSVLEGGGLPGKLADCSE 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SE++IVEGDSAGGSAKQGRDR +QAILPL+GKILNVE+ + NEEI+ L+
Sbjct: 416 KDPAASELYIVEGDSAGGSAKQGRDRHYQAILPLKGKILNVEKARLDKILGNEEIRTLVS 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ ++F + RYHKI I+TDAD+DG+HIRTLLLTFF+RY K + ++G +YV P
Sbjct: 476 ALGTGIGEDEFNVDKARYHKIFIMTDADIDGSHIRTLLLTFFFRYMKPIIEKGFLYVAQP 535
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY ++ GK Y + D E + S + IQR+KGLGEM P QLWETT++PE+R+
Sbjct: 536 PLYLIKHGKTSTYLFSDKEKDEYLKSLGTEKAV-IQRYKGLGEMNPEQLWETTMDPEKRV 594
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+ ++ ++D EA F+ LMG V+ R+ I+ NAA + NLD
Sbjct: 595 VLKVKLDDYVEAEDTFNILMGDEVNPRRRFIEVNAAKVANLD 636
>gi|300711735|ref|YP_003737549.1| DNA topoisomerase II subunit B [Halalkalicoccus jeotgali B3]
gi|448296156|ref|ZP_21486217.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
gi|299125418|gb|ADJ15757.1| DNA topoisomerase II subunit B (DNA gyrase) [Halalkalicoccus
jeotgali B3]
gi|445582879|gb|ELY37219.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
Length = 635
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/633 (49%), Positives = 431/633 (68%), Gaps = 22/633 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVR RPAMYIGST RGLHHLVYE++DNA+DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRTRPAMYIGSTDSRGLHHLVYEVVDNAIDEALAGYCDTIGVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHAEYDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV + RDG +H ++ G P + V +++++ GT +RFWPD +F
Sbjct: 125 NALSERLEVEIRRDGAVWHHRFDHGAPEGDIE-RVRDLEAEEETGTTVRFWPDDGIFEDR 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F +T+ RIRELAFLNP + I L E + E + + GG+ E+V++LN + P
Sbjct: 184 -EFVVSTLENRIRELAFLNPGVEITLADERDETEST----FQYDGGIREFVEYLNETRTP 238
Query: 308 LHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ V + D + I +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 239 LHEDVLYLDDEERNIQVEVAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +V
Sbjct: 298 DYANGEGLLDEIDENLRGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAVH 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L Y E HPD +++ K++ A KA AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 358 EGLGTYFEEHPDTAQAVVRKAVEAAKARKAAKQAEELTRRKSALESTALPGKLADCQTRD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P E+E+F+VEGDSAGGSAKQGR+R+FQAILPL+GKILNVE+ + +N EI++LI A+
Sbjct: 418 PNEAELFVVEGDSAGGSAKQGRNRKFQAILPLKGKILNVEKHRLDRILENNEIRDLITAV 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV GE+F + RY +I+I+TDADVDGAHIRTLLLT FYR+ + L + G +Y PPL
Sbjct: 478 GAGV-GEEFDIDEARYKRIVIMTDADVDGAHIRTLLLTLFYRHMRPLIEAGYVYAAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y++ G + + +AE + + + A IQRFKGLGEM P QLWETT+NP+ R+LK
Sbjct: 537 YRLRYGGETREAMAEAEREAIIDEY--GAPDRIQRFKGLGEMNPDQLWETTMNPDNRVLK 594
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
++ +EDAA A+ +FS LMG V+ RK+ IQ A
Sbjct: 595 RVTVEDAAAADRMFSVLMGDAVEPRKQFIQEHA 627
>gi|289433379|ref|YP_003463251.1| DNA gyrase subunit B [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169623|emb|CBH26157.1| DNA gyrase, B subunit [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 646
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/640 (50%), Positives = 430/640 (67%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + A
Sbjct: 16 YNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEA 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P ++ + +E + TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G +Y+Q++ RG V + D +GT + F PD Q+F+
Sbjct: 134 NALSTYLEVYVHREGKKYYQRFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFSET 189
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD +T+ R RELAFLN LTI++ ED E ++ + GG+ YV+ LN K
Sbjct: 190 TEFDFDTLRTRTRELAFLNRGLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDV 247
Query: 308 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H+ + + D I +++++Q+ + +S ++ +AN+I T +GGTH G K +LTR +N
Sbjct: 248 IHEPPIYLEGERDDIMVEISMQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVIN 306
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+++K KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+
Sbjct: 307 DYARRNKVFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFS 366
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L +++ +PDV I+ K + A +A LAAKRAR++ R+ S L SSLPGKLADCSS
Sbjct: 367 EALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRN 426
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE SE++IVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+
Sbjct: 427 PEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAM 486
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G DF RYHK+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPL
Sbjct: 487 GTGFGG-DFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPL 545
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GKQ++Y Y D +L+ +S + Y IQR+KGLGEM P QLW+TT+NPE R L
Sbjct: 546 YQIKHGKQIEYVYSDGQLEDYLASLDKDTKYGIQRYKGLGEMNPEQLWDTTMNPEHRTLL 605
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ I+DA +A+ F LMG RV+ R++ I +NA + NLD
Sbjct: 606 QVNIKDAIDADETFEMLMGDRVEPRRKFIEENAQYVKNLD 645
>gi|395218293|ref|ZP_10401952.1| DNA gyrase subunit B [Pontibacter sp. BAB1700]
gi|394454663|gb|EJF09280.1| DNA gyrase subunit B [Pontibacter sp. BAB1700]
Length = 652
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/664 (48%), Positives = 440/664 (66%), Gaps = 44/664 (6%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E + Y ++ IQVLEGLEAVRKRPAMYIG G +GLHHLV+E++DN++DEA AG+
Sbjct: 5 EEKQLHNNYSADSIQVLEGLEAVRKRPAMYIGDIGIKGLHHLVWEVVDNSIDEALAGHCD 64
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V + +NSI P D H +SALE V+TVLHAGGKF + Y VSGGL
Sbjct: 65 TINVTINTNNSITVSDNGRGIPTDFHQKEGRSALEVVMTVLHAGGKFDKDT--YKVSGGL 122
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS L VTV R+G + Q Y+ G P V + + D+ GT + F P
Sbjct: 123 HGVGVSCVNALSTDLHVTVHRNGKVFEQHYNIGVPAYP----VREIGTTDKTGTTVTFQP 178
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ--YNEYFFAGGLEEY 297
D +FTT ++ ++TIA R+REL+FLN + I L E Q + ++ GGL+E+
Sbjct: 179 DASIFTTT-EYKYDTIASRLRELSFLNKGIRINLTDLRETGEDGQPLSDSFYSEGGLKEF 237
Query: 298 VQWLNTDKK-----PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
V +L+ ++ P+H + +G+ +++ALQ+ + +Y++ + Y N+I TI+GGT
Sbjct: 238 VAYLDETRENLIPEPIH----IESEKNGVPVEIALQYNT-SYTENIFSYVNNINTIEGGT 292
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H+ G + +LTRTL + KS + I ++G+ REGLT +ISV+V P+FEGQTKT+L
Sbjct: 293 HVGGFRRALTRTLKAYADKSGMLDKLKIDIAGDDFREGLTAVISVKVQEPQFEGQTKTKL 352
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN +V VD +V E L ++LE +P +I+ K + A +A AA++AR++V++K+VL S
Sbjct: 353 GNSDVGGAVDTAVGEMLNQFLEENPKEARTIVQKVILAAQARNAARKAREMVQRKNVLSS 412
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
+SLPGKLADCS PE EI++VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ E
Sbjct: 413 TSLPGKLADCSDNNPENCEIYLVEGDSAGGSAKQGRNRMFQAILPLRGKILNVEKAQEHR 472
Query: 533 MYKNEEIQNLIRALGLG---VKGED-FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
+Y+NEEI+N+I ALG+ +GE E LRYH+III+TDADVDG+HIRTL+LTFF+R
Sbjct: 473 IYENEEIKNMITALGVSFGTAEGEKALNMEKLRYHRIIIMTDADVDGSHIRTLILTFFFR 532
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD-------AELKKVKSSFPSNALYSIQR 641
Y K L + G IY+ +PPLY V++GK+ +YC+ + AEL K K +QR
Sbjct: 533 YMKELIENGYIYIALPPLYLVKKGKEERYCWSEQDRIDAIAELGKGKEDS-----VGVQR 587
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
+KGLGEM P QLW TT++PE R LK++ IE AAEA+ +FS LMG V R++ I+ A
Sbjct: 588 YKGLGEMNPEQLWNTTMDPETRSLKRVTIESAAEADHLFSMLMGDEVGPRRDFIERNAKY 647
Query: 702 VNLD 705
+D
Sbjct: 648 ARVD 651
>gi|227538317|ref|ZP_03968366.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241832|gb|EEI91847.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300]
Length = 652
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/657 (47%), Positives = 445/657 (67%), Gaps = 28/657 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E + TY ++ IQVLEGLEAVRKRP+MYIG TG +GLHHLVYE++DN++DEA AGY
Sbjct: 3 EEKKNTSTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGYCD 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
+I V + NSI P ++ NKSALE V+TVLHAGGKF + Y VSGGL
Sbjct: 63 DILVTIHEGNSISVQDNGRGIPTGINKKENKSALELVMTVLHAGGKFDKDT--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS L V RDG + Q+Y +GKP V + +R GT + F+P
Sbjct: 121 HGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKP----KYDVKAIGESERTGTTVTFFP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D ++FT ++++T++ R+RELAFLN +LTI +E D + + +F GGL+E+
Sbjct: 177 DPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIVDEREILDDGSFRKDVFFSEGGLQEF 236
Query: 298 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++L+ +++ L D + G+ ++LALQ+ +D YS+ + Y N+I TI+GG+H+ G
Sbjct: 237 VKFLDGNRQSLIPDPIYVEGIKQGVPVELALQY-NDTYSENVHSYVNNINTIEGGSHVAG 295
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ LTRTL + S +K+ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 296 FRRGLTRTLKKYAEDSGLLKNLKVEIAGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNE 355
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V VD +V E L+ YLE +P I+ K + A +A AA++AR++V++K+V+ S LP
Sbjct: 356 VMGAVDVAVGEILSTYLEENPREAKIIVQKVVIAAQARAAARKAREMVQRKTVMGGSGLP 415
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS P + EIF VEGDSAGG+AKQGRDR+FQAI+PLRGKILNVE+ E +Y+N
Sbjct: 416 GKLADCSDNDPHKCEIFFVEGDSAGGTAKQGRDRKFQAIMPLRGKILNVEKAMEHKIYEN 475
Query: 537 EEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
EEI+N+ ALG+ V D K E LRYHKI+I+TDADVDG+HI TL+LTF++RY K
Sbjct: 476 EEIKNMFTALGVSVGTPDDAKALNLEKLRYHKIVIMTDADVDGSHIATLILTFYFRYMKE 535
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEM 648
L + G +Y+ PPLY V++GK+ QY + + + ++++K + ++++ +QR+KGLGEM
Sbjct: 536 LIENGYVYIATPPLYLVKKGKESQYAWTEDQRLQAIQRLKGAGKEDSVH-VQRYKGLGEM 594
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW+TT+NPE R L+Q+ I++AAE + +FS LMG V R+E I+ A +D
Sbjct: 595 NAEQLWDTTMNPEHRTLRQVTIDNAAECDRIFSMLMGDEVAPRREFIEKNARYAKID 651
>gi|448352648|ref|ZP_21541429.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
gi|445641927|gb|ELY94998.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
Length = 643
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 310/636 (48%), Positives = 429/636 (67%), Gaps = 20/636 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINE 66
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D+SI P+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSISVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS LE TV RDG Y + G+P+ + V ++ + GT I+FWPD +F TT
Sbjct: 125 NALSSRLETTVKRDGGVYEHAFEIGEPIGDME-RVRDMEPDEETGTEIQFWPDDDIFETT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 304
+ F +T++ R+RELAFLN + I LR E E + Y + GG+ E+V++LN
Sbjct: 184 DMSF--STLSNRLRELAFLNSGVRITLRDERERTEDGEAVAETYEYEGGIREFVEYLNET 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +H D++ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 RSAMHEDIIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G ++ + D + +L GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 301 VVNDYGNENNLLSDIEENLKGEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEG 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 AMHDCLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ PEE+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMI 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
+G G+ G++F E +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y
Sbjct: 481 TGIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ + DAE ++ +QRFKGLGEM P QLWETT+NPE R
Sbjct: 540 PPLYRIRYRGETYDAMTDAERDEIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPENR 599
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ +EDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 600 ILKQITVEDAAAADKMFSVLMGDAVEPRKQFIKENA 635
>gi|116511733|ref|YP_808949.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|125624430|ref|YP_001032913.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris MG1363]
gi|389854795|ref|YP_006357039.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
gi|116107387|gb|ABJ72527.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|124493238|emb|CAL98205.1| topoisomerase IV subunit B [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071217|gb|ADJ60617.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
Length = 651
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/649 (48%), Positives = 443/649 (68%), Gaps = 25/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F PD ++
Sbjct: 129 SSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 304 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRSL 482
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 FTAMGTGFGG-DYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIA 541
Query: 603 VPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWET 656
PP+Y ++ G + + E L++ + + ++QR+KGLGEM QLWET
Sbjct: 542 QPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWET 601
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 602 TMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|289579993|ref|YP_003478459.1| DNA gyrase subunit beta [Natrialba magadii ATCC 43099]
gi|448281231|ref|ZP_21472538.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
gi|289529546|gb|ADD03897.1| DNA gyrase, B subunit [Natrialba magadii ATCC 43099]
gi|445579161|gb|ELY33557.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
Length = 643
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 310/636 (48%), Positives = 429/636 (67%), Gaps = 20/636 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINE 66
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D+SI P+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSISVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS LE TV RDG Y + G+P+ + V ++ + GT I+FWPD +F TT
Sbjct: 125 NALSSRLETTVKRDGGVYEHAFEIGEPIGDME-RVRDMEPDEETGTEIQFWPDDDIFETT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 304
+ F +T++ R+RELAFLN + I LR E E + Y + GG+ E+V++LN
Sbjct: 184 DMSF--STLSNRLRELAFLNSGVRITLRDERERTEDGEAVAETYEYEGGIREFVEYLNET 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +H D++ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 RSAMHEDIIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G ++ + D + +L GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 301 VVNDYGNENNLLSDIEENLKGEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEG 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 AMHDCLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ PEE+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMI 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G+ G++F E +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y
Sbjct: 481 TAIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ + D E ++ +QRFKGLGEM P QLWETT+NPE R
Sbjct: 540 PPLYRIRYRGETYDAMTDVERDEIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPENR 599
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ +EDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 600 ILKQITVEDAAAADKMFSVLMGDAVEPRKQFIKENA 635
>gi|57233676|ref|YP_180759.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
gi|57224124|gb|AAW39181.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
Length = 642
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/643 (50%), Positives = 428/643 (66%), Gaps = 25/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 AENYNASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IPID+HP T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 IYKDGSVSVEDNGRGIPIDIHPVTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNAL+E V V R+G Y Q Y RGKP T L V D GT F D Q+F
Sbjct: 131 SVVNALAEWTTVKVRRNGKIYQQSYQRGKPSTPLE----EVGVSDGSGTTTIFKADSQIF 186
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+T ++D T+ R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFETLTDRLREIAYLNKGLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRN 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ H + K D +++A+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVTEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
E+F+VEGDSAGGSAKQGR+RRFQAILPLRGKILNVE+ M +EEI+ +I
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAII 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
AL G+ DF LRY++++++TDADVDG+HIRTLLLTFF+R+ L E +++
Sbjct: 481 TALAAGID-NDFDPAKLRYNRLVLMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK++ G + Y+DAE + + S SN + IQR+KGLGEM QLW+TT++P R
Sbjct: 540 PPLYKIKIGSNEHWVYNDAEKETLLSQTKSNKV-DIQRYKGLGEMSAEQLWKTTMDPASR 598
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ +EDAA+A+ +F+ LMG V RK IQ+ + V NLD
Sbjct: 599 TLLEVKVEDAAKADQIFNLLMGGEVAPRKAFIQSHSKTVKNLD 641
>gi|340357105|ref|ZP_08679733.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sporosarcina
newyorkensis 2681]
gi|339618783|gb|EGQ23374.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sporosarcina
newyorkensis 2681]
Length = 640
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/649 (48%), Positives = 436/649 (67%), Gaps = 21/649 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
+E V Y + QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN++DEA AGY
Sbjct: 1 MEEREVQTAYDANQIQVLEGLEAVRKRPGMYIGTTSAKGLHHLVWEIVDNSIDEALAGYC 60
Query: 128 SNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 178
+IEV + DN IP+ + +T + A+E ++TVLHAGGKFGG S
Sbjct: 61 DHIEVTIEKDNWIRVDDNGRGIPVGIQESTGRPAVEVIMTVLHAGGKFGGGGYKVSGG-- 118
Query: 179 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 238
LHGVG SVVNALSE EV V D Y ++SRG PV+ + + D GT IRF
Sbjct: 119 LHGVGSSVVNALSEKTEVFVRLDQKLYAIEFSRG-PVSK---ELEVIGESDETGTTIRFK 174
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 298
D ++FT ++++T+A R+RELA+LN L I + E + K++ + + GG++ YV
Sbjct: 175 ADPEIFTETTVYEYSTLATRLRELAYLNRGLRITITDEREEEPKSEV--FHYEGGIKSYV 232
Query: 299 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 357
Q LN +K+P+ + + + DGI+I++A+Q+ S Y++ +L +AN+I T +GGTH G
Sbjct: 233 QHLNENKEPIFEEPIYIEGERDGISIEIAMQYNS-GYAENLLSFANNIHTYEGGTHESGF 291
Query: 358 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
K +LTR +N +K+ +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN EV
Sbjct: 292 KTALTRVINDYARKNGLLKEADGNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEV 351
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
+ + E L +L +P V ++ KS A +A LAAK AR+L R+KS L SSLPG
Sbjct: 352 STITNSLFSEALQRFLIENPVVARKVVDKSTMAARARLAAKNARELTRRKSALEVSSLPG 411
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KL+DCSS P SE++IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N
Sbjct: 412 KLSDCSSRDPSISELYIVEGDSAGGSAKNGRDRHFQAILPLRGKILNVEKARLDRILGNA 471
Query: 538 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
EI+ +I ALG G+ G +F + RYHK++I+TDADVDGAHIRTLLLTFF+R+ + L + G
Sbjct: 472 EIRMIITALGTGI-GSEFDLQKARYHKLVIMTDADVDGAHIRTLLLTFFFRFMRPLIEAG 530
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
+Y+ PPLY+V GK QYCYD+ L+++ S P++ I R+KGLGEM P QLWETT
Sbjct: 531 YVYIAQPPLYRVRAGKNEQYCYDEEALQEILRSMPASPKPDITRYKGLGEMNPEQLWETT 590
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++P++R Q+ +EDA EA+ F LMG V+ R++ I+ NA + N+D
Sbjct: 591 MDPDKRTFLQVRLEDAMEADATFEELMGDEVEPRRKFIEDNAVYVQNID 639
>gi|206895598|ref|YP_002246982.1| DNA gyrase B subunit [Coprothermobacter proteolyticus DSM 5265]
gi|206738215|gb|ACI17293.1| DNA gyrase, B subunit [Coprothermobacter proteolyticus DSM 5265]
Length = 637
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/644 (49%), Positives = 430/644 (66%), Gaps = 26/644 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K YG+EQI+VL LE VRKRPAMYIGST GLHHL++EI+DNA+DEA AG+ +I+V
Sbjct: 7 TKNYGAEQIKVLGDLEGVRKRPAMYIGSTDKNGLHHLIWEIVDNAIDEAMAGFCDHIKVV 66
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
L D S IP+++HP + +E VLT LHAGGKFGG + Y SGGLHGVGL
Sbjct: 67 LYKDGSVLVEDNGRGIPVEIHPQEGRPTVEVVLTKLHAGGKFGGQA--YKASGGLHGVGL 124
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE LE+TV RDG Y Q+Y GKPVT + + D + T ++F PDK +F
Sbjct: 125 SVVNALSEWLEITVKRDGTVYWQRYEFGKPVTEVK-EIGQYDDTESSATIVQFKPDKSIF 183
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+FD+ I R+RELAFLN ++TI L++E S+PE + E AG LEE N+
Sbjct: 184 ADT-RFDYEVIRQRLRELAFLNSEVTIELQREGSEPEFFHF-ESGLAGLLEEVA---NSS 238
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+K + DV+ F + +++A + D + + ++ + NS+RT+DGGTH++G+++++++T
Sbjct: 239 EKII-DVLRFSGAQQDVQVEVAFTYVDD-FDENIVSFVNSVRTVDGGTHVQGLRSAISKT 296
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L +G++ +KD ++S + R+GL +++VRVP PEFEGQTK +LG+ VR +V+
Sbjct: 297 LAEVGRRKGLLKDNNVS--SDDFRQGLRAVVAVRVPEPEFEGQTKGKLGSKYVRNIVEDV 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + YLE DV +++ ++L++ + KR R++++ + + S+ LPGKL+DCSS
Sbjct: 355 VSKAFESYLETQNDVTKTLIQRALASAEMRETFKRTREMMKNRLRVESTVLPGKLSDCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
E+ E+ IVEG+SAGGSAKQGRDR QA+LPLRGKILNVE+ + NEEIQ LI
Sbjct: 415 RDVEKRELLIVEGESAGGSAKQGRDRTIQAVLPLRGKILNVEKASWKRVLDNEEIQALIA 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G GV GE F LRY KIII+TDADVDGAHIRTLLLTFF+R + L +EG IY+ P
Sbjct: 475 AIGTGV-GEHFNFAKLRYGKIIIMTDADVDGAHIRTLLLTFFFRMMRPLVEEGHIYIAQP 533
Query: 605 PLYKVER--GKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PLYK+ER K + Y Y D +L+ + IQR+KGLGEM QLWETTLNPE
Sbjct: 534 PLYKIERKKSKDIIYLYSDEDLQAFLREHEGEN-FEIQRYKGLGEMNAEQLWETTLNPET 592
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L + +EDA +A+ +FS LMG +V RKE I ANLV NLD
Sbjct: 593 RNLYMVTVEDAEKADELFSVLMGEKVQPRKEFIFANANLVKNLD 636
>gi|170760652|ref|YP_001785341.1| DNA gyrase subunit B [Clostridium botulinum A3 str. Loch Maree]
gi|169407641|gb|ACA56052.1| DNA gyrase, B subunit [Clostridium botulinum A3 str. Loch Maree]
Length = 637
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/643 (51%), Positives = 446/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+G + QK+ RG T L V + GT+I F PD ++F
Sbjct: 125 VVNALSEQCEVEVRREGHIWKQKFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDIDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F + +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + + +IQR+KGLGEM P QLW+TT+NPE R
Sbjct: 534 PLYRIFKAKKEIYVYSDPELDEALLELGGKDTNTNIQRYKGLGEMNPEQLWDTTMNPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ IEDA A+ +F+ LMG +V+ R+E I+ NA +VNLD
Sbjct: 594 TLLQVTIEDAMAADEIFTILMGTKVEPRREFIEDNADKVVNLD 636
>gi|56961788|ref|YP_173510.1| DNA gyrase subunit B [Bacillus clausii KSM-K16]
gi|56908022|dbj|BAD62549.1| DNA gyrase subunit B [Bacillus clausii KSM-K16]
Length = 641
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/647 (49%), Positives = 423/647 (65%), Gaps = 22/647 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N ++TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I
Sbjct: 4 NEQNQTYDESQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNSIDEAMAGFCDEI 63
Query: 131 EVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
+V + N+ IP+ + + A+E ++T LHAGGKFGG S LHG
Sbjct: 64 KVTIEEGNALTVEDNGRGIPVGIQEKMGRPAVEVIMTTLHAGGKFGGGGYKVSGG--LHG 121
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG SVVNALS L V V DG + Q YSRG P LT + D+ GT I F PD
Sbjct: 122 VGASVVNALSTHLTVNVHLDGKIHSQSYSRGVPDADLTV----IGETDKTGTTITFQPDP 177
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F ++FD+ T+A RIRELAFLN LTI + ED E + Y + GG+ +V+ L
Sbjct: 178 EIFRETVEFDYETLAARIRELAFLNKGLTIKI--EDKRTEDGKKATYHYEGGISSFVKHL 235
Query: 302 NTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N K+ LH+ + + DGI++++A+Q+ +D ++ ++ +AN+I T +GGTH G K
Sbjct: 236 NRSKETLHEEPIYVESEKDGISVEVAVQY-NDGFTSSIYSFANNINTHEGGTHESGFKTG 294
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N +K+ K+ D +LSGE VREGLT IISV++P P+FEGQTKT+LGN E R +
Sbjct: 295 LTRVINDYARKNGLFKENDPNLSGEDVREGLTAIISVKIPEPQFEGQTKTKLGNSEARTI 354
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D E +L +P V I+ K L A +A AAK+AR+L R+KS L SSLPGKL
Sbjct: 355 TDSLFSESFARFLSENPGVARKIVDKGLMASRAREAAKKARELTRRKSALEVSSLPGKLT 414
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DC+S SE+FIVEGDSAGGSAK GRD FQAILPLRGKILNVE+ + N EI+
Sbjct: 415 DCTSKDASISELFIVEGDSAGGSAKGGRDPHFQAILPLRGKILNVEKARLDKILANNEIR 474
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I A+G G+ G++F RYHKI+I+TDADVDGAHIRTL+LTFFYRY + L + G +Y
Sbjct: 475 MIITAIGTGI-GDEFDISKARYHKIVIMTDADVDGAHIRTLILTFFYRYMRELLENGYVY 533
Query: 601 VGVPPLYKVERGK-QVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYK+E+GK V Y Y D EL ++ + S+QR+KGLGEM QLWETT++
Sbjct: 534 IAQPPLYKIEQGKNNVTYVYSDRELDAHLATVADRSKVSVQRYKGLGEMNAGQLWETTMD 593
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P+ R + Q+ + DA +A+ +F LMG RV+ R++ IQ A+ V NLD
Sbjct: 594 PQVRNMLQVTLADAIKADEIFEILMGDRVEPRRDFIQENAHYVKNLD 640
>gi|340618721|ref|YP_004737174.1| DNA gyrase subunit B [Zobellia galactanivorans]
gi|339733518|emb|CAZ96895.1| DNA gyrase, subunit B [Zobellia galactanivorans]
Length = 650
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/659 (46%), Positives = 435/659 (66%), Gaps = 26/659 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
++ EA KE K Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA
Sbjct: 1 MSEEANKEEN-KKQYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEA 59
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
G+ I V + DNSI P+DLH SALE V+T + AGGKF S Y
Sbjct: 60 MGGHCDTISVIINEDNSITTRDNGRGIPVDLHKKEGISALEVVMTKIGAGGKFDKDS--Y 117
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
VSGGLHGVG+SVVNALS+ L+ TV+RDG + Q+Y RGK + V + + +GT
Sbjct: 118 KVSGGLHGVGVSVVNALSDRLKATVYRDGKIWEQEYERGKALYP----VKSIGETEERGT 173
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFAG 292
+ F PD Q+F I++ + T+A R+REL+FLN +TI++ EK ++ +E F++
Sbjct: 174 MVTFHPDDQIFQQTIEYSYETLANRMRELSFLNKGVTISITDRRQKDEKGEFLSETFYSD 233
Query: 293 -GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 350
GL+E+V++L+ +++PL V+ + + I +++A+ + + +Y++ + Y N+I T +G
Sbjct: 234 EGLKEFVKFLDGNREPLIQSVISMEGEKNDIPVEVAMIYNT-SYTENLHSYVNNINTHEG 292
Query: 351 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 410
GTH+ G + LT TL S ++ + G+ REGLT I+SV+V P+FEGQTKT
Sbjct: 293 GTHLSGFRRGLTTTLKKYADASGMLEKLKFEVQGDDFREGLTAIVSVKVAEPQFEGQTKT 352
Query: 411 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 470
+LGN EV V Q+V E L++YLE HPD I+ K + A +A AA +AR++V++K+V+
Sbjct: 353 KLGNREVSSAVSQAVSEMLSDYLEEHPDDAKVIVQKVILAAQARHAATKAREMVQRKTVM 412
Query: 471 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 530
LPGKL+DCS P + E+F+VEGDSAGG+AK GRDR+FQAILPLRGKILNVE+ +
Sbjct: 413 SIGGLPGKLSDCSEQDPTQCEVFLVEGDSAGGTAKMGRDRKFQAILPLRGKILNVEKAMQ 472
Query: 531 AAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFF 586
+++NEEI+N+ ALG+ + ED K E LRYHK++I+ DADVDG+HI TL+LTFF
Sbjct: 473 HKVFENEEIKNIYTALGVTIGTEDDSKALNLEKLRYHKVVIMCDADVDGSHIETLILTFF 532
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLG 646
+RY + L + G +Y+ PPLY V++G + +Y + D E ++ S+ SIQR+KGLG
Sbjct: 533 FRYMRELIEGGHVYIATPPLYLVKKGSKKRYAWSDKERDEIADSYSGGV--SIQRYKGLG 590
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
EM QLW+TT+NPE R L+Q+ I++A E + VFS LMG V R+E I+ A N+D
Sbjct: 591 EMNAEQLWDTTMNPEFRTLRQITIDNATETDRVFSMLMGDEVPPRREFIEKNAVYANID 649
>gi|294781815|ref|ZP_06747148.1| DNA gyrase, B subunit [Fusobacterium sp. 1_1_41FAA]
gi|294481925|gb|EFG29693.1| DNA gyrase, B subunit [Fusobacterium sp. 1_1_41FAA]
Length = 639
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/642 (48%), Positives = 433/642 (67%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G Y+QKY RGKP + ++ + GT +RF D +F T
Sbjct: 124 VNALSEWLEVEVRKEGNVYYQKYHRGKPEEDV--KIIGSCEANEHGTTVRFKADGDIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +++ T++ R++ELA+LN LTI L D E+ + Y F GG+ +++ + ++
Sbjct: 182 LV-YNYFTLSNRLKELAYLNRGLTITL--SDLRKEEKKEETYKFNGGILDFLNEIVKEEA 238
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ D + + D + +D+ + + + ++T+ + N+I T +GGTH++G + +LT+ +
Sbjct: 239 TIIDKPFYVSAEQDNVGVDVTFTYTT-SQNETIYSFVNNINTHEGGTHVQGFRTALTKVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLMGNDIREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNSIV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P + ++ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SSSLKIFLEDNPAITKIVVEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEG+SAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 418 KAEECEIFIVEGNSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + G+ F LRY KII++TDADVDGAHIRTL+LTF YRY + L +EG IY+ PP
Sbjct: 478 FGTSI-GDTFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMRELINEGNIYIACPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK V + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 537 LYKVSSGKQIIYAYNDLELKNVLAQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ +++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 597 LLKVSVDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|385838590|ref|YP_005876220.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
gi|358749818|gb|AEU40797.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
Length = 651
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/649 (48%), Positives = 443/649 (68%), Gaps = 25/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F PD ++
Sbjct: 129 SSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 304 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPKVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRSL 482
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 FTAMGTGFGG-DYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIA 541
Query: 603 VPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWET 656
PP+Y ++ G + + E L++ + + ++QR+KGLGEM QLWET
Sbjct: 542 QPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWET 601
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 602 TMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|298374500|ref|ZP_06984458.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19]
gi|298268868|gb|EFI10523.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19]
Length = 651
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 310/650 (47%), Positives = 433/650 (66%), Gaps = 26/650 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y ++ IQVLEGLEAVRKRP+MYIG T +GLHHLVYE++DN++DEA AGY + I+V
Sbjct: 9 STEYSADSIQVLEGLEAVRKRPSMYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVV 68
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+H KSALE VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 69 INEDNSITVTDDGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGV 126
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS L+ V R+G + Q++S GKP+ + +D+ D+ GT I F P+ +F
Sbjct: 127 SCVNALSTYLKAEVRRNGKVHMQEFSCGKPLHDVQV----IDNTDKTGTTISFKPNGSIF 182
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLN 302
T ++ ++ +A R+RELAFLN +T+ L + E + F GL+E+V++++
Sbjct: 183 TVT-EYKYDILATRLRELAFLNAGITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYID 241
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
K+ L DV+ + GI +++AL + + +Y++++ Y N I TI+GGTH+ G + L
Sbjct: 242 RSKEKLIPDVIHIVTEKQGIPVEVALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGL 300
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTL + SK ++ + + G+ REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 301 TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAV 360
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D ++ E L YLE HP I+ K + A +A AA++AR+LV++KS L LPGKLAD
Sbjct: 361 DMAIGEALGYYLEEHPKEAKIIVDKVILAAQARHAARKARELVQRKSPLTGGGLPGKLAD 420
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CSS E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + ++++EEIQN
Sbjct: 421 CSSKDAAICELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQN 480
Query: 542 LIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ RA+G+ V ED K E LRYHK+II+TDADVDG+HI TL+LTFF+R ++L + G
Sbjct: 481 IYRAMGVTVGTEDDPKALNMEKLRYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENG 540
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWE 655
+Y+ PPLY ++GK +YC+ + + ++ + SI QR+KGLGEM QLW+
Sbjct: 541 YVYLATPPLYLCKKGKVEEYCWTEQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWD 600
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R LKQ+ I++AAEA+ +F+ LMG V R+E I+ A N+D
Sbjct: 601 TTMNPENRTLKQITIDNAAEADQIFAMLMGEDVGPRREFIEENATYANID 650
>gi|5817861|gb|AAD52967.1|AF167102_1 DNA gyrase beta subunit [Acholeplasma laidlawii]
Length = 615
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/619 (50%), Positives = 411/619 (66%), Gaps = 24/619 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL- 135
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 9 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALCGYADEITIEILK 68
Query: 136 ------ADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DN IP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 69 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 127 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 183 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 240
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +L+ ++
Sbjct: 241 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALSAVIS 299
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 300 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 358 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PE+SEI+IVEGDSAGGSAKQGRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+
Sbjct: 418 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAM 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ E F RYHKI+I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPL
Sbjct: 478 GTGISDE-FDITKARYHKIVIMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
YK+ G+ QY Y++ EL ++ + + SIQR+KGLGEM QLW+TT++P +R L
Sbjct: 537 YKISWGRNFQYRYNEQELNELLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLL 594
Query: 667 QLVIEDAAEANVVFSSLMG 685
Q+ +EDA EA+ VFS LMG
Sbjct: 595 QIKLEDAIEADQVFSMLMG 613
>gi|28896290|ref|NP_802640.1| DNA gyrase subunit B [Streptococcus pyogenes SSI-1]
gi|161485752|ref|NP_664280.2| DNA gyrase subunit B [Streptococcus pyogenes MGAS315]
gi|342164970|sp|P0DG04.1|GYRB_STRP3 RecName: Full=DNA gyrase subunit B
gi|342164971|sp|P0DG05.1|GYRB_STRPQ RecName: Full=DNA gyrase subunit B
gi|28811541|dbj|BAC64473.1| putative DNA gyrase B subunit [Streptococcus pyogenes SSI-1]
Length = 650
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/647 (48%), Positives = 442/647 (68%), Gaps = 26/647 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V +
Sbjct: 13 QEYDASQIQVLEGLEAVRMRPGMYIGSTAKEGLHHLVWEIVDNSIDEALAGFASHIKVFI 72
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
ADNSI P+D+ T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG S
Sbjct: 73 EADNSITVVDDGRGIPVDIQVKTGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGSS 130
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L+V V+++G ++Q++ RG V L + + D GT + F PD ++FT
Sbjct: 131 VVNALSTQLDVRVYKNGQIHYQEFKRGAVVADLEV----IGTTDVTGTTVHFTPDPEIFT 186
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
QFD++ +A RI+ELAFLN L I++ + S E+ ++ + + GG+ YV++LN K
Sbjct: 187 ETTQFDYSVLAKRIQELAFLNRGLKISITDKRSGMEQEEH--FHYEGGIGSYVEFLNDKK 244
Query: 306 KPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ + + +++GI +++A+Q+ + +Y +T++ +AN+I T +GGTH +G +A+LTR
Sbjct: 245 DVIFETPIYTDGELEGIAVEVAMQYTT-SYQETVMSFANNIHTHEGGTHEQGFRAALTRV 303
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 304 INDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRL 363
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E +L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCSS
Sbjct: 364 FSEAFQRFLLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSS 423
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 424 NDANQNELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFT 483
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G G DF RY K++I+TDADVDGAHIRTLLLT YR+ + + + G +Y+ P
Sbjct: 484 AMGTGF-GADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQP 542
Query: 605 PLYKVERGKQV-QYCY----DDAELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTL 658
P+Y V+ G ++ +Y + +LK + + ++QR+KGLGEM QLWETT+
Sbjct: 543 PIYGVKVGSEIKEYIQPGIDQEDQLKTALEKYSIGRSKPTVQRYKGLGEMDDHQLWETTM 602
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+PE R++ ++ ++DAAEA+ VF LMG RV+ R++ I+ A LD
Sbjct: 603 DPENRLMARVTVDDAAEADKVFDMLMGDRVEPRRDFIEENAVYSTLD 649
>gi|310825640|ref|YP_003957997.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308737374|gb|ADO35034.1| hypothetical protein ELI_0009 [Eubacterium limosum KIST612]
Length = 640
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/640 (50%), Positives = 443/640 (69%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAV+KRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 12 YTADQIQVLEGLEAVQKRPGMYIGSTGKQGLHHLVYEVVDNSIDEALAGYCKNIVVTIDK 71
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+N I P D++ K+ +E LTVLHAGGKFGG VSGGLHGVG+SVV
Sbjct: 72 NNGITVVDDGRGIPTDMNHKMKKTGVELALTVLHAGGKFGGGGY--KVSGGLHGVGVSVV 129
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L V V ++ YHQ +++GK + L + T + F PD +F
Sbjct: 130 NALSSELTVEVKQNKKIYHQTFAKGKKTSELEVTGNTNRTG----TTVHFQPDPDIFDEL 185
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ +D + + R+RELAFLN ++I L E + EK + Y + GG+ Y++++N +K P
Sbjct: 186 V-YDFDVLEHRLRELAFLNKGVSITLADE-REAEKRK-ETYCYEGGIRSYIEYMNKNKDP 242
Query: 308 LHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L++ + + K++D ++++A Q+ + YS+ + YAN+I T +GG+H+ G K++LTRT+N
Sbjct: 243 LYEQIAYYEKEMDDYSLEIAFQYTA-GYSENIYSYANNIYTPEGGSHLNGFKSALTRTIN 301
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ +K+ +K D +L+GE VREGLT IIS+++ +P+FEGQTKT+LGNPEV+ +V+ V
Sbjct: 302 TYARKNNYIKGNDKNLTGEDVREGLTAIISIKLLDPQFEGQTKTKLGNPEVKGIVETIVG 361
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ L+ +LE +P + +++ K+LSA +A AAK+AR+L R+KS L +++LPGKLADC
Sbjct: 362 DELSAFLEENPTIAKTVIEKTLSASRAREAAKKARELTRRKSALDTTALPGKLADCREKD 421
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P SEIFIVEGDSAGGSAK GRD R QAILPLRGKILNVE+ + + ++++I A
Sbjct: 422 PSMSEIFIVEGDSAGGSAKSGRDSRIQAILPLRGKILNVEKSRLDRILTADTLKSMITAF 481
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV GEDF E RYHKIII+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ PPL
Sbjct: 482 GTGV-GEDFNVEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRGLIEEGYVYIAQPPL 540
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
+KV RG+ V+Y Y++ L K+ + Y+IQR+KGLGEM QLWETT++P R+L
Sbjct: 541 FKVARGQHVEYVYNEKALDKMFED-KDRSKYTIQRYKGLGEMDAHQLWETTMDPSVRILN 599
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ IEDAA A+ VF+ LMG +V RKE I+ NAA + NLD
Sbjct: 600 RVNIEDAAYADEVFTILMGDKVQPRKEFIERNAAKVKNLD 639
>gi|345020606|ref|ZP_08784219.1| DNA gyrase subunit B [Ornithinibacillus scapharcae TW25]
Length = 640
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 321/644 (49%), Positives = 437/644 (67%), Gaps = 29/644 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +I+V +
Sbjct: 11 SYNADQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYCDHIQVIIE 70
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+ T K A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 71 EDNSITVMDNGRGIPVDIQKKTGKPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 128
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS +LEV+V RDG + + RG PV L V DR GT F PD ++FT
Sbjct: 129 VNALSTNLEVSVHRDGKIHMIGFERGVPVKPLEV----VGETDRTGTTTHFKPDPEIFTE 184
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE----YFFAGGLEEYVQWLN 302
+D +T+ R+RELAFLN + I++ E + NE + + GG+ EYV+++N
Sbjct: 185 TTTYDLDTLVQRVRELAFLNKGIRISI-------EDKRTNEGPISFHYEGGISEYVEYIN 237
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ LH+ + GI +++A+Q+ +D ++ ++ +AN+I T +GGTH G K LT
Sbjct: 238 RNKEGLHEPFYAEGEDQGIAVEVAVQY-NDGFNSSIYSFANNIHTYEGGTHESGFKTGLT 296
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +K+ + +L+G+ VREG+T I+SV+ P+P+FEGQTKT+LGN EVR + D
Sbjct: 297 RVINDYARKNGLMKESEPNLTGDDVREGITAIVSVKHPDPQFEGQTKTKLGNSEVRAITD 356
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
E +++L +P + I+ K L A +A AAK+ARDL R+KSVL S+LPGKLADC
Sbjct: 357 SVFSEMFSKFLLENPSIGKIIVEKGLMASRARAAAKKARDLTRRKSVLEISNLPGKLADC 416
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N E++++
Sbjct: 417 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNNEVRSM 476
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+ G+DF RYHKI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+
Sbjct: 477 ITAMGTGI-GDDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEHGYVYIA 535
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYKV++GK V Y YDD EL ++ + P + +QR+KGLGEM QLWETT++PE
Sbjct: 536 QPPLYKVQQGKVVHYAYDDKELDRILAELPESPKPGLQRYKGLGEMNAEQLWETTMDPEN 595
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R L Q+ + DA EA+ VF LMG +V+ R++ I +NA + NLD
Sbjct: 596 RTLLQVELSDAIEADHVFDMLMGDKVEPRRQFIEENAQYVKNLD 639
>gi|190710563|gb|ACE95112.1| gyrase subunit B [Bacillus thuringiensis serovar entomocidus]
Length = 627
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 321/635 (50%), Positives = 428/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNCIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPSVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++ A EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQGAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|190710575|gb|ACE95118.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/635 (50%), Positives = 430/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P +WETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTLIWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|448473611|ref|ZP_21601753.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
gi|445819123|gb|EMA68972.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
Length = 645
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/641 (50%), Positives = 435/641 (67%), Gaps = 18/641 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I
Sbjct: 2 PEQSEYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDDIT 61
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + AD S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGV
Sbjct: 62 VTIHADGSVGVTDDGRGIPVDTHEKYDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGV 119
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+SVVNALSE LEV V RDG Y +++RG+PV V ++ + GT IRFWPD +
Sbjct: 120 GVSVVNALSERLEVEVKRDGGVYRHEFARGEPVEDGFERVRDMEEGESTGTYIRFWPDSE 179
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQ 299
+F T +F +T+A R+RELAFLN +T+A +ED+D E F + GG+ E+V
Sbjct: 180 IFETT-EFAFSTLANRLRELAFLNSGVAITLADEREDADISDAGDEETFRYDGGIREFVA 238
Query: 300 WLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
+LN + P+HD V + D D I +++A+Q ++ ++ +AN+I T +GGTH+ G K
Sbjct: 239 YLNETRTPIHDDVIYFADEDADIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFK 297
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRT+N + V D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 298 TALTRTVNDYANEHGLVDDLDANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 357
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+V+ + E L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPGK
Sbjct: 358 GIVESATHEKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGK 417
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC + PEE+E+F+VEGDSAGGSAKQGR+R+ QAILPL+GKILNVE+ + +N+E
Sbjct: 418 LADCQTRDPEEAELFVVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKHRLDRILENDE 477
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+ LI A+G G+ GE+F + RYHKII++TDADVDGAHIRTLLLT YR+ K L + G
Sbjct: 478 IRALITAIGAGI-GEEFDIDDARYHKIILMTDADVDGAHIRTLLLTLLYRHMKPLLEAGY 536
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY+V + +AE ++ +QRFKGLGEM P QLW+TT+
Sbjct: 537 VYAAQPPLYRVRYRGETYDAMTEAERDRIVEEKCDGNPDQVQRFKGLGEMNPDQLWDTTM 596
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+PE R+LKQ+ I+DAA A+ +F+ LMG V+ RK+ I+ A
Sbjct: 597 DPENRILKQINIDDAAAADRMFNVLMGDAVEPRKQFIKEHA 637
>gi|294674979|ref|YP_003575595.1| DNA gyrase subunit B [Prevotella ruminicola 23]
gi|294471706|gb|ADE81095.1| DNA gyrase, B subunit [Prevotella ruminicola 23]
Length = 658
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/657 (48%), Positives = 433/657 (65%), Gaps = 35/657 (5%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV +
Sbjct: 10 QNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTHIEVTI 69
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 NEDNSITVQDNGRGIPVDEHEKMHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVS 127
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VNALS + V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FT
Sbjct: 128 CVNALSTHMMSQVFRNGHIYQQEYEKGKPLYDVKI----VGDTDKTGTRQQFWPDGSIFT 183
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN-QYNEYFFAG-GLEEYVQWLNT 303
T ++ ++ IA R+RELA+LN +TI L D E N + E F A GL+E+V++++
Sbjct: 184 TT-EYKYDIIAKRMRELAYLNAGITITLTDLRPDEEGNLRQPEVFHAKEGLKEFVRYVDR 242
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ + D + + + DG+ I++AL + SD YS+ + Y N+I TI+GGTH+ G + +L
Sbjct: 243 HRTSIIGDPICLKTEKDGVPIEVALLYNSD-YSENIHSYVNNINTIEGGTHLTGFRIALA 301
Query: 363 RTLNSLGKKS----KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
RTL + K ++ I ++ + REGLT IISV+V P+FEGQTKT+LGN EV
Sbjct: 302 RTLKKYADEDDQLRKQIEKAKIEVAQDDFREGLTAIISVKVAEPQFEGQTKTKLGNSEVN 361
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
V ++V E +T YLE +P +I K + A A +AA++AR+ V++K+ + LPGK
Sbjct: 362 GAVQKAVGEAMTNYLEENPKEAHTICEKVILAATARIAARKARESVQRKNPMTGGGLPGK 421
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCS+ P+E EIF+VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ +++ E
Sbjct: 422 LADCSNKDPKECEIFLVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKVQWHRVFEAES 481
Query: 539 IQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
+ N+I+++G+ GV GED K + LRY KIII+TDADVDG+HI TL++T FYR+ +
Sbjct: 482 VMNIIQSIGVRFGVDGEDSKDANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPQV 541
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEM 648
G +Y+ PPLYK K +YCY + + K V + L++ QR+KGLGEM
Sbjct: 542 IQGGHLYIATPPLYKCTYKKTSEYCYTEQQRQAFIDKYVAGNGDDKGLHT-QRYKGLGEM 600
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT+NPE R+LKQ+ IE+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 601 NPEQLWETTMNPENRLLKQVTIENAAEADEIFSMLMGDDVEPRREFIEKNATYANID 657
>gi|237743164|ref|ZP_04573645.1| DNA gyrase subunit B [Fusobacterium sp. 7_1]
gi|289765530|ref|ZP_06524908.1| subunit B [Fusobacterium sp. D11]
gi|336401760|ref|ZP_08582518.1| DNA gyrase, B subunit [Fusobacterium sp. 21_1A]
gi|423137793|ref|ZP_17125436.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229433460|gb|EEO43672.1| DNA gyrase subunit B [Fusobacterium sp. 7_1]
gi|289717085|gb|EFD81097.1| subunit B [Fusobacterium sp. D11]
gi|336160471|gb|EGN63517.1| DNA gyrase, B subunit [Fusobacterium sp. 21_1A]
gi|371959262|gb|EHO76954.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 635
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 429/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTVHYQKYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D+
Sbjct: 178 LV-YNYFTLSNRLKELAYLNKGLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDET 234
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + F + D + +D+ + + + ++ + + N I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFFVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVI 293
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ IIS ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVV 353
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 473
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YR+ L G +Y+ PP
Sbjct: 474 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRHMIDLIYGGNVYIACPP 532
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 533 LYKVAAGKQIIYAYNDLELKNILGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 593 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|336171503|ref|YP_004578641.1| DNA gyrase subunit B [Lacinutrix sp. 5H-3-7-4]
gi|334726075|gb|AEH00213.1| DNA gyrase, B subunit [Lacinutrix sp. 5H-3-7-4]
Length = 649
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 302/653 (46%), Positives = 432/653 (66%), Gaps = 25/653 (3%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
KE Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+
Sbjct: 5 KEEFNKHNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHCD 64
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
NI V + DNSI P+DLH SALE V+T + AGGKF S Y VSGGL
Sbjct: 65 NITVTINEDNSITTEDDGRGIPVDLHKKEGISALEVVMTKIGAGGKFDKDS--YKVSGGL 122
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALSE L TV+R+G + Q+Y RGK + V + D++GT + F P
Sbjct: 123 HGVGVSCVNALSEHLTATVYRNGKIWEQEYERGKSLYP----VKAIGDTDKRGTIVTFKP 178
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEY 297
D +FT ++++++T+A R+RELA+LN +T+ L + S E Y F GL+E+
Sbjct: 179 DPTIFTQTLEYNYDTLASRMRELAYLNKGITVHLIDKRSKKEDGSYEGETFHSEEGLKEF 238
Query: 298 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
+++L+ ++PL DV+ F + +G+ +++A+ + + +Y++ + Y N+I T +GGTH+ G
Sbjct: 239 IKFLDATREPLMKDVISFEGEKNGVPVEVAMVYNT-SYAENLHSYVNNINTHEGGTHLSG 297
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ LT TL +S + ++G+ REGLT I+SV+V P+FEGQTKT+LGN E
Sbjct: 298 FRRGLTHTLKKYADESGMLDKLKFDIAGDDFREGLTAIVSVKVQEPQFEGQTKTKLGNRE 357
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V V QSV E L++YLE +P+ +I+ K + A +A AA++AR++V++K+V+ LP
Sbjct: 358 VSAAVSQSVSEMLSDYLEENPEDAKTIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLP 417
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKL+DCS P + E+++VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +++N
Sbjct: 418 GKLSDCSEQDPAKCEVYLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMTHKVFEN 477
Query: 537 EEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
EEI+N+ ALG+ + E+ K LRYHKI+I+ DAD+DG+HI TL+LTFF+RY K
Sbjct: 478 EEIKNIFTALGVTIGTEEDSKALNLSKLRYHKIVIMCDADIDGSHIETLILTFFFRYMKE 537
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L + G IY+ PPLY +++G + QY ++D E K + F ++ IQR+KGLGEM Q
Sbjct: 538 LIENGHIYIATPPLYLIKKGAKKQYAWNDEERKAIMQEFGESS--KIQRYKGLGEMNAEQ 595
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LW+TT+NPE R L+Q+ I++ EA+ VFS LMG V R+E I+ A N+D
Sbjct: 596 LWDTTMNPEFRTLRQIHIDNGVEADRVFSMLMGDEVPPRREFIEKNAIYANID 648
>gi|160946608|ref|ZP_02093811.1| hypothetical protein PEPMIC_00566 [Parvimonas micra ATCC 33270]
gi|158446992|gb|EDP23987.1| DNA gyrase, B subunit [Parvimonas micra ATCC 33270]
Length = 638
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/646 (48%), Positives = 441/646 (68%), Gaps = 30/646 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++ I+VL GLE VR RP MYIGSTG +GLHHLVYE++DN++DEA AG I V +
Sbjct: 7 RNYGAKDIRVLTGLEPVRLRPGMYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTI 66
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+++HP T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+S
Sbjct: 67 FEDNSVRVEDNGSGIPVEVHPQTGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE L V RDG Y Q++SRG + L V + GT I F PD ++F
Sbjct: 125 VVNALSEWLIANVKRDGKLYEQQFSRGNTTSKLEV----VGTSKETGTIITFKPDSEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 304
T I ++ + R RE+AFLN + I E D + E F + GG++ +V+++N +
Sbjct: 181 TTI-YEKEILRNRFREMAFLNKGVKIIFTDERED-----FTETFHYEGGIKSFVEYMNRN 234
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K LH+ V+ F+ +++++Q+ +D YS+ +L +AN+I T +GG+H+ G + +LTR
Sbjct: 235 KNNLHNEVIYFQGQRGDSQVEISMQY-TDGYSENVLTFANNIHTPEGGSHLVGFRTALTR 293
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TLN G+K +KDKD +L G+ REGLT I+S+++PNP+FEGQTK +LGN E R +V+
Sbjct: 294 TLNDYGRKYNLIKDKDANLQGDDTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVET 353
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+ + L +LE +P V I+ K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC
Sbjct: 354 FLYDNLMTFLEENPKVGKIIIEKAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQ 413
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ +EI++VEGDSAGGSAKQGRD +FQA+LPL+GKI+NVE+ + EEI+++I
Sbjct: 414 ESDISVNEIYLVEGDSAGGSAKQGRDSKFQAVLPLKGKIMNVEKARIDKILGYEEIKSMI 473
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A G G+ G+DF + LRY KI+I+TDADVDGAHIRTL+LTFFYRY K L ++G +Y+
Sbjct: 474 TAFGTGI-GKDFNLDNLRYGKIVIMTDADVDGAHIRTLILTFFYRYMKELIEQGHVYIAQ 532
Query: 604 PPLYKVERG-KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY + +G K V+YC+ D EL+ ++ + IQR+KGLGEM P QLWETT+NPE
Sbjct: 533 PPLYGIIKGVKVVKYCWTDEELQASLDELGRDS-HRIQRYKGLGEMNPAQLWETTMNPEN 591
Query: 663 RMLKQLVIEDAAEANV--VFSSLMGARVDTRKELI-QNAANLVNLD 705
R+ Q+ I+D ++ FS+LMG +V+ R+E I QNA + N+D
Sbjct: 592 RLFLQVNIDDEELVSIDETFSTLMGDKVEPRREFIEQNAKYVENID 637
>gi|145577995|gb|ABP82716.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar oswaldocruzi]
Length = 631
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/643 (50%), Positives = 436/643 (67%), Gaps = 27/643 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVE DSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVE-DSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 469
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 470 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 528
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 529 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 588
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ ++DA EA+ F LMG +V+ R+ IQ NA + NLD
Sbjct: 589 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLD 631
>gi|456014414|gb|EMF48027.1| DNA gyrase subunit B [Planococcus halocryophilus Or1]
Length = 642
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/650 (48%), Positives = 432/650 (66%), Gaps = 21/650 (3%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A +E + +TY + QIQVLEGLEAVRKRP MYIGSTG RGLHHLV+EI+DN++DEA AG+
Sbjct: 2 AMEEKGLQETYEASQIQVLEGLEAVRKRPGMYIGSTGARGLHHLVWEIVDNSIDEALAGH 61
Query: 127 ASNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
+ I+V++ ADN IP+ + + A+E ++TVLHAGGKFGG S
Sbjct: 62 CTEIQVSIEADNWIRVEDNGRGIPVGMQKKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG- 120
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
LHGVG SVVNALSE+ EV V RD ++ K+ RG +T + + D GT IRF
Sbjct: 121 -LHGVGASVVNALSETTEVYVNRDEKRHYIKFERG----AVTEELKVIGDSDHTGTTIRF 175
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 297
D ++F ++ + + R+RELA+LN L I ++ E EK + Y F GG++ Y
Sbjct: 176 KADSEIFKETTVYEFDILDHRLRELAYLNRGLRIVVKDEREGEEKEKI--YHFVGGIKSY 233
Query: 298 VQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V+ LN K PLH+ F + DGIT+++++Q+ + Y+ + +AN+I T +GGTH G
Sbjct: 234 VEHLNKSKDPLHEEAIFVEAERDGITVEVSMQYNA-GYAANIFSFANNINTHEGGTHESG 292
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
K +LTR +N G+K +K++D++L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E
Sbjct: 293 FKTALTRVVNDYGRKKSMLKEQDLNLTGDDVREGLTAIISIKHPDPQFEGQTKTKLGNTE 352
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V +V+ +L +P V I+ K + A A +AAK+AR+ R+KSVL SSLP
Sbjct: 353 VSTIVNNLFSNGFERFLLENPAVSKKIIEKGIMASHARMAAKKAREFTRRKSVLEVSSLP 412
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCSS P+ SEI+IVEGDSAGGSAK GRDR FQAILPLRGKILNVE+ + N
Sbjct: 413 GKLADCSSRDPKISEIYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILTN 472
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+EI+N+I ALG G+ GE+F E RYHKI+I+TDADVDGAHIRTLLLTF +RY + L +
Sbjct: 473 DEIRNIITALGTGI-GEEFNLEKARYHKIVIMTDADVDGAHIRTLLLTFLFRYMRPLLEA 531
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G IY+ PPL+++++GK ++Y Y D +LK +IQR+KGLGEM QLW+T
Sbjct: 532 GYIYIAQPPLFQIKQGKHIEYVYTDDQLKTALERLSPTPKPNIQRYKGLGEMNATQLWDT 591
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T++P+ R L Q+ + DA A+ F LMG V+ R+ I +NA + NLD
Sbjct: 592 TMDPDVRTLLQVTLNDAMVADETFHILMGDDVEPRRNFIEENAKYVKNLD 641
>gi|303235765|ref|ZP_07322372.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
gi|302484212|gb|EFL47200.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
Length = 683
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 315/654 (48%), Positives = 430/654 (65%), Gaps = 32/654 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 37 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTIN 96
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 97 EDNSITVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 154
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y +GKP+ ++ V D+ GTR +FWPD +FTT
Sbjct: 155 VNALSSHMMSQVFRNGKIYQQEYEKGKPLYSVKI----VGDTDKTGTRQQFWPDASIFTT 210
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDK 305
I + + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 211 TI-YQWDIVARRMRELAFLNAGIKITLTDLRPNEEGKTKQEVFHAQEGLKEFVRYVDRHR 269
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRT
Sbjct: 270 THLFDDVIYLKTEKQGIPIEVAIMYNND-YNENIHSYVNNINTIEGGTHLTGFRTALTRT 328
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 329 LKAYADNDTQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 388
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 389 VQQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLA 448
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P+E EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 449 DCSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVM 508
Query: 541 NLIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV GE DF+ + LRY KIII+TDADVDG+HI TL++T FYRY + +
Sbjct: 509 NIIQSIGVRFGVDGESDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIE 568
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPV 651
EG +Y+ PPLYK K +YCY + + L+K N QR+KGLGEM P
Sbjct: 569 EGHLYIATPPLYKCTFKKVSEYCYTEQQRLQFLEKYVGGDEENKALHTQRYKGLGEMNPE 628
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW+TT+NP+ R+LKQ+ IE+A A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 629 QLWDTTMNPKTRLLKQVTIENATTADEMFSMLMGDDVEPRREFIEQNATYANID 682
>gi|429740969|ref|ZP_19274638.1| DNA gyrase, B subunit [Porphyromonas catoniae F0037]
gi|429159638|gb|EKY02135.1| DNA gyrase, B subunit [Porphyromonas catoniae F0037]
Length = 653
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/659 (47%), Positives = 429/659 (65%), Gaps = 26/659 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + K Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA A
Sbjct: 2 SEELFDQASEKEYSASSIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
GY ++I+V + DNSI P+D+H KSALE VLTVLHAGGKF S Y V
Sbjct: 62 GYCNDIKVIIHEDNSIEVQDNGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGS--YKV 119
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+S VNALS L+ V RDG Y +++S+G P T L + + DR GT I
Sbjct: 120 SGGLHGVGVSCVNALSTYLKAIVHRDGKIYTEEFSQGVPTTDLQT----IGTTDRTGTTI 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS-DPEKNQYNE-YFFAGG 293
F PD +F+ ++ ++ R+RELAFLN +T+ L E D E E Y+ G
Sbjct: 176 IFKPDDTIFSVT-EYQFKILSNRLRELAFLNAGITLTLVDERVVDEEGKPLTEVYYSQDG 234
Query: 294 LEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
L+E+ ++++ K+ L DV+ + GI +++A+ + + +Y++ + Y N+I TI+GGT
Sbjct: 235 LKEFAKYIDRSKEHLVDDVIHIVTEKQGIPVEVAMTYNT-SYNENIYSYVNNINTIEGGT 293
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H+ G + LTRTL SK + + ++G+ REGLT +IS++V P+FEGQTKT+L
Sbjct: 294 HLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGLTAVISIKVAEPQFEGQTKTKL 353
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV VD +V E L YLE HP I+ K + A A AA++AR++V++KS L
Sbjct: 354 GNNEVMGAVDIAVSEALETYLEEHPKEAKVIVDKVILAATARQAARKAREMVQRKSPLSG 413
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
LPGKLADCSS P SE+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +
Sbjct: 414 GGLPGKLADCSSKDPVLSELFLVEGDSAGGTAKQGRDREFQAILPLRGKILNVEKAMQHK 473
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKE----ALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
+ ++EEI+N+ ALG+ + E+ KE LRYHK+II+TDADVDG+HI TL+LTFF+R
Sbjct: 474 VLESEEIRNIYTALGVTIGTEEDAKELNLAKLRYHKVIIMTDADVDGSHIATLILTFFFR 533
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV--KSSFPSNALYSIQRFKGLG 646
++L + G +Y+ PPLY RGK+ +YC+ + + + + +QR+KGLG
Sbjct: 534 NMRSLIENGYVYIATPPLYLCTRGKEKEYCWTEQQRQAFIDRVGGGDEKRVHVQRYKGLG 593
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
EM QLWETT+NPE R L+++ IE+AAEA+ +FS LMG V R+E I+ A +D
Sbjct: 594 EMNDEQLWETTMNPENRTLRKITIENAAEADAIFSMLMGDEVAPRREFIEANATYARID 652
>gi|296328806|ref|ZP_06871320.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154141|gb|EFG94945.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 639
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 430/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+N IP D+HP KSA+E VLT+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PENIIEVMDNGRGIPTDIHPKYGKSAMEIVLTILHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G+ ++QKY RGKP + V+ + GT +RF D ++F T
Sbjct: 124 VNALSEWLEVEVRKNGVVHYQKYHRGKPEENV--KVIGSCDESEHGTIVRFKADGEIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDK 305
I +++ T++ R++ELA+LN LTI L D E+ + Y F GG+ +++ + + D
Sbjct: 182 LI-YNYFTLSNRLKELAYLNKGLTIIL--SDLRKEEKKEETYKFDGGILDFLNEIVKEDT 238
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 239 TIIEKPFYVSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SSSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 418 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY K L EG IY+ PP
Sbjct: 478 FGTSI-GETFDIAKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 537 LYKVSSGKQIIYAYNDLELKNILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 597 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|163755890|ref|ZP_02163007.1| DNA gyrase, B subunit [Kordia algicida OT-1]
gi|161324061|gb|EDP95393.1| DNA gyrase, B subunit [Kordia algicida OT-1]
Length = 645
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/645 (46%), Positives = 431/645 (66%), Gaps = 25/645 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+ I V +
Sbjct: 9 YSAASIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTISVIINE 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +H SALE V+T + AGGKF S Y VSGGLHGVG+S V
Sbjct: 69 DNSITTEDNGRGIPVGIHEKKGVSALEVVMTEIGAGGKFDKDS--YKVSGGLHGVGVSCV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ L TV+RDG + Q+Y RGK + V + D++GT + F PD +FT
Sbjct: 127 NALSDHLRATVYRDGKIWEQEYERGKALYP----VKAIGDSDKRGTVVTFKPDASIFTQT 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDK 305
+++++ T+A R+REL++LN +TI L + + EK +Y E F + GL+E++++L+ ++
Sbjct: 183 LEYNYETLANRMRELSYLNKGITITLTDKRNKDEKGEYIGEVFHSQEGLKEFIKYLDGNR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ + DVV F + +GI +++A+ + + +YS+ + Y N+I T +GGTH+ G + LT T
Sbjct: 243 EQIIADVVAFEGEKNGIPVEVAMTYNT-SYSENLHSYVNNINTHEGGTHLSGFRRGLTHT 301
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L + + + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+
Sbjct: 302 LKKYAEGTGMLDKLKFDISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVSASVSQA 361
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E LT+YLE HPD +I+ K + A +A AA++AR++V++K+V+ LPGKL+DCS
Sbjct: 362 VSEMLTDYLEEHPDDAKTIVQKVVLAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSE 421
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P + E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+
Sbjct: 422 QDPAKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNIFT 481
Query: 545 ALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
ALG+ + E+ K LRYHKI+I+ DADVDG+HI TL+LTFF+RY K L + G IY
Sbjct: 482 ALGVTIGTEEDSKALNLSKLRYHKIVIMCDADVDGSHIATLILTFFFRYMKELIENGHIY 541
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLY V++G + +Y ++D E + F A +IQR+KGLGEM QLW+TT+NP
Sbjct: 542 IAAPPLYLVKKGAKRRYAWNDEERDAIIEEFGQGA--NIQRYKGLGEMNAEQLWDTTMNP 599
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ R L+Q++I++ EA+ VFS LMG V R+E I+ A N+D
Sbjct: 600 DFRTLRQVMIDNGGEADRVFSMLMGDEVPPRREFIEKNAVYANID 644
>gi|336420154|ref|ZP_08600396.1| DNA gyrase, B subunit [Fusobacterium sp. 11_3_2]
gi|336162116|gb|EGN65105.1| DNA gyrase, B subunit [Fusobacterium sp. 11_3_2]
Length = 635
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 429/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTVHYQKYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D+
Sbjct: 178 LV-YNYFTLSNRLKELAYLNKGLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDET 234
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + F + D + +D+ + + + ++ + + N I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFFVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVI 293
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ IIS ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVV 353
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 473
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YR+ L G +Y+ PP
Sbjct: 474 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRHMIDLIYGGNVYIACPP 532
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 533 LYKVAAGKQIIYAYNDLELKNILGQINQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 593 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|431081762|ref|ZP_19495852.1| DNA gyrase subunit B [Enterococcus faecium E1604]
gi|431116731|ref|ZP_19497997.1| DNA gyrase subunit B [Enterococcus faecium E1613]
gi|430565694|gb|ELB04840.1| DNA gyrase subunit B [Enterococcus faecium E1604]
gi|430568511|gb|ELB07558.1| DNA gyrase subunit B [Enterococcus faecium E1613]
Length = 648
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 439/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFMPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV++LN +
Sbjct: 185 TETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYDGGIKSYVEYLNAN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QLWETT++
Sbjct: 541 PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD 600
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 601 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|226226219|ref|YP_002760325.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
gi|226089410|dbj|BAH37855.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
Length = 658
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/666 (48%), Positives = 443/666 (66%), Gaps = 28/666 (4%)
Query: 59 LSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNA 118
+++S A EA ++ YG+ I VL+GLEAVRKRP MYIGST RGLHHLVYE++DN+
Sbjct: 1 MANSNAPEAQED---ENEYGAHSITVLKGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNS 57
Query: 119 VDEAQAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGS 169
+DEA AG+A +EV + AD+SI P+D+HP +E +TVLHAGGKF +
Sbjct: 58 IDEALAGFAKRVEVTIHADDSISVEDDGRGIPVDVHPIEKLPGVELAMTVLHAGGKFDKN 117
Query: 170 SSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD 229
+ Y VSGGLHGVG+SVVNALS+ L+V + RDG E+ ++RG VTT L
Sbjct: 118 T--YKVSGGLHGVGVSVVNALSDVLKVWIKRDGKEHFMDFARG--VTTTKLKTLRNVPAK 173
Query: 230 RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NE 287
GT++ F PD +F +++ T+A R+RELAFLN + I LR E D K+ E
Sbjct: 174 ETGTKVWFKPDATIFQETTRYEWATLANRLRELAFLNKGIQITLRDERPDEMKDGQPREE 233
Query: 288 YFFA-GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSI 345
FFA GGL E+V +L +KKPLH DVV + D I I++ALQ+ +D+Y+D + + N+I
Sbjct: 234 VFFARGGLREFVVFLTGNKKPLHQDVVYLDTERDDIGIEMALQY-NDSYADNVFSFVNNI 292
Query: 346 RTIDGGTHIEGVKASLTRTLNSLGKKSKTV--KDKDISLSGEHVREGLTCIISVRVPNPE 403
T +GGTH+ G K++LT +N ++S + KDK+I LSG+ VREGLT ++SV+V P+
Sbjct: 293 NTHEGGTHLTGFKSALTSVINKYIERSSNLNKKDKEIRLSGDDVREGLTAVLSVKVREPQ 352
Query: 404 FEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDL 463
FEGQTKT+LGN E V + E L++YLE HP ++I+ K++SA +A AA++ARDL
Sbjct: 353 FEGQTKTKLGNSEAEGAVRSVMNELLSQYLEEHPKTANAIIDKAISASRAREAARKARDL 412
Query: 464 VRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKIL 523
R+K+ L ++LPGKLADCS + P E+++VEGDSAGGSAKQGR+R FQAILPLRGKI+
Sbjct: 413 TRKKNALDVAALPGKLADCSLSDPALCELYLVEGDSAGGSAKQGRNRNFQAILPLRGKII 472
Query: 524 NVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLL 583
NVE+ + NEEI+ +I A+G G+K E F RY KIII+TDADVDGAHIRTLLL
Sbjct: 473 NVEKARFDKVLSNEEIRTIITAIGTGIKDE-FDLGKTRYQKIIIMTDADVDGAHIRTLLL 531
Query: 584 TFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQ 640
TFF+R + L D G +Y+ PPLY+V +GK+ Y Y + E +Q
Sbjct: 532 TFFFRQMRELIDAGYMYIAQPPLYRVAKGKEEFYAYSEKERDSFSERLGGPEGRGNIMVQ 591
Query: 641 RFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
R+KGLGEM P QLW+TT++PE R + ++ +EDA A+ F +LMG V+ R++ I++ A
Sbjct: 592 RYKGLGEMNPAQLWKTTMDPETRTMLRVTMEDAVLADQTFQTLMGDDVEPRRQFIESNAR 651
Query: 701 LV-NLD 705
V NLD
Sbjct: 652 FVSNLD 657
>gi|448603022|ref|ZP_21656843.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
gi|445746218|gb|ELZ97680.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
Length = 639
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/635 (50%), Positives = 430/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEFGEPQVDQFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISLTDERTD----ESSSFRFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P +SE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPSKSELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|254302374|ref|ZP_04969732.1| DNA topoisomerase (ATP-hydrolyzing) [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322566|gb|EDK87816.1| DNA topoisomerase (ATP-hydrolyzing) [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 635
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 428/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G+ ++QKY RGKP + ++ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKAGVIHYQKYHRGKPEEDV--KIIGSCDENEHGTIVRFKADGEIFET 177
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDK 305
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEDT 234
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFYISSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 293
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 353
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 473
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PP
Sbjct: 474 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPP 532
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 533 LYKVSSGKQIVYAYNDLELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 593 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 634
>gi|427392992|ref|ZP_18886895.1| DNA gyrase subunit B [Alloiococcus otitis ATCC 51267]
gi|425730923|gb|EKU93753.1| DNA gyrase subunit B [Alloiococcus otitis ATCC 51267]
Length = 649
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/644 (50%), Positives = 431/644 (66%), Gaps = 21/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ KTY + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DNA+DEA AGYA I V
Sbjct: 15 LKKTYDASQIQVLEGLEAVRVRPGMYIGSTSKEGLHHLVWEIVDNAIDEAMAGYADKISV 74
Query: 133 ALL-------ADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++L ADN IP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 75 SILEGDVIQVADNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 132
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALSE L+V V RDG Y Q Y RG + L V D GT + F D +
Sbjct: 133 SSVVNALSEYLQVQVHRDGKIYQQVYKRGLVDSDLEV----VGETDHTGTIVTFKADSLI 188
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F +D +T+A RIRELAFLN L I++ ED Q Y F GG+ YV LN+
Sbjct: 189 FKDTTSYDFDTLATRIRELAFLNRGLNISI--EDKRQADGQSLNYHFEGGISSYVDHLNS 246
Query: 304 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
++ L++ F + + +GI++++ALQ +D++ ++ +AN+I T +GG HI G K +LT
Sbjct: 247 KREVLYETPIFLEGEEEGISVEIALQH-TDSFHTNLMSFANNIHTYEGGMHISGFKTALT 305
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +K+ +++ + + +G+ VREGLT ++S++ P+P+FEGQTKT+LGN EVR ++D
Sbjct: 306 RAVNDYARKNNLLRESEDNFTGDDVREGLTVVLSIKHPDPQFEGQTKTKLGNSEVRGIID 365
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ ++ YL +P V I+ K+L A KA AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 366 RLFSQHFERYLMENPKVGKRIVDKALLASKARQAAKRAREVTRKKSGLEISNLPGKLADC 425
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PEESE+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 426 SSKDPEESELFIVEGDSAGGSAKQGRSRIFQAILPIRGKILNVEKASIDRILANEEIRSL 485
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G GE+F E RY+K+II+TDADVDGAHIRTL+LT YRY + L + G +Y+
Sbjct: 486 FTAMGTGF-GEEFNVEEARYNKLIIMTDADVDGAHIRTLVLTLLYRYMRPLIEAGFVYIA 544
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V++GK+V+Y D EL P + S+QR+KGLGEM QLWETT+NPE
Sbjct: 545 QPPLYQVKQGKKVKYLDSDRELDSYLKEIPDSPKPSVQRYKGLGEMDAEQLWETTMNPEH 604
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
R L ++ ++DA EA+ +F LMG V R++ I +NA + N+D
Sbjct: 605 RRLLRVDVDDAIEADTIFDMLMGEDVKPRRDFIKENARYVENID 648
>gi|19705416|ref|NP_602911.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713409|gb|AAL94210.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 639
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 430/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+N IP D+HP KSA+E VLT+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PENIIEVMDNGRGIPTDIHPKYGKSAMEIVLTILHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G+ ++QKY RGKP + V+ + GT +RF D ++F T
Sbjct: 124 VNALSEWLEVEVRKNGVVHYQKYHRGKPEEDV--KVIGSCDESEHGTIVRFKADGEIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDK 305
I +++ T++ R++ELA+LN LTI L D E+ + Y F GG+ +++ + + D
Sbjct: 182 LI-YNYFTLSNRLKELAYLNKGLTIIL--SDLRKEEKKEETYKFDGGILDFLNEIVKEDT 238
Query: 306 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 239 TIIEKPFYVSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SSSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 418 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY K L EG IY+ PP
Sbjct: 478 FGTSI-GETFDIAKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 537 LYKVSSGKQIIYAYNDLELKNILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 597 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|422932975|ref|ZP_16965900.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339891873|gb|EGQ80794.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 639
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/642 (48%), Positives = 429/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 124 VNALSEWLEVEVRKNGTVHYQKYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D+
Sbjct: 182 LV-YNYFTLSNRLKELAYLNKGLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDET 238
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + F + D + +D+ + + + ++ + + N I T +GGTH++G + +LT+ +
Sbjct: 239 TIIEKPFFVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ IIS ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLMGNDIREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 418 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YR+ L G +Y+ PP
Sbjct: 478 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRHMIDLIYGGNVYIACPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK + N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 537 LYKVAAGKQIIYAYNDLELKNILGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 597 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|282859419|ref|ZP_06268525.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|424900188|ref|ZP_18323730.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
gi|282587817|gb|EFB93016.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|388592388|gb|EIM32627.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
Length = 656
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/654 (47%), Positives = 440/654 (67%), Gaps = 34/654 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTINE 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSITVEDNGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ + V+R+G Y Q+Y +GKP+ + V ++ GTR +FWPD +FTT
Sbjct: 129 NALSKHMMSQVFREGKIYQQEYEKGKPLYPVKV----VGETEKTGTRQQFWPDGTIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDK 305
+ F + +A R+RELA+LN + I L DPE + E F A GL+EYV++++ +
Sbjct: 185 V-FQWDVVARRMRELAYLNAGIKITLIDLRPDPETGKTRTEIFHAKDGLKEYVRYVDRHR 243
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ L +DV+ + + G+ I++A+ + +D Y++ + Y N+I TI+GGTH++G + +LTRT
Sbjct: 244 QHLFNDVIYLKSEKQGVPIEVAIMYNTD-YTENIHSYVNNINTIEGGTHLQGFRTALTRT 302
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 303 LKTYADNDAQISKQIEKAKIEITGEDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSGA 362
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L+ YLE HP I +K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 363 VQQAVGEALSAYLEEHPSEAKMICNKVVLAATARIAARKARESVQRKNVMTGGGLPGKLA 422
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 423 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVM 482
Query: 541 NLIRALGL--GVKGE-DFKK--EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+ + DF+ + LRY KIII+TDADVDG+HI TL++T FYRY + +
Sbjct: 483 NIIQSIGVRFGVEEDSDFEANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIE 542
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPV 651
+G +++ PPLYK K +YCY + + + K + +++ QR+KGLGEM P
Sbjct: 543 QGHLFIATPPLYKCTYKKVSEYCYTEQQRQAFIDKYGAGEEGKTIHT-QRYKGLGEMNPE 601
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ VFS LMG V+ R+E I+ A N+D
Sbjct: 602 QLWETTMDPKTRLLKQVTIENAADADEVFSMLMGDDVEPRREFIEQNATYANID 655
>gi|149278877|ref|ZP_01885012.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase)
[Pedobacter sp. BAL39]
gi|149230496|gb|EDM35880.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase)
[Pedobacter sp. BAL39]
Length = 652
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/661 (48%), Positives = 451/661 (68%), Gaps = 36/661 (5%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+EN Y ++ IQVLEGLEAVRKRP+MYIG TG +GLHHLVYE++DN++DEA AG+A
Sbjct: 3 EENDPKSNYSADNIQVLEGLEAVRKRPSMYIGDTGIKGLHHLVYEVVDNSIDEALAGHAD 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I V +L DNSI P ++ NKSALE V+TVLHAGGKF + Y VSGGL
Sbjct: 63 TIYVNILEDNSIRVEDNGRGIPTGINKKENKSALEIVMTVLHAGGKFDKDT--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS L+ V R+G + Q+Y+ GKP+ + V D++GT + F P
Sbjct: 121 HGVGVSCVNALSTHLKAEVHREGQIWMQEYNIGKPLYDVKL----VGETDKRGTIVTFSP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEY 297
D +FT ++ ++T+A R+REL+FLN + + L E ++D + N E F + GGL+E+
Sbjct: 177 DPTIFTQTTEYRYDTLAARLRELSFLNKGIKLTLTDERETDADGNFITELFHSEGGLKEF 236
Query: 298 VQWLNTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
VQ+L+ + +P++ V G + +GI ++LALQ+ +D+Y++ + Y N+I T +GGT
Sbjct: 237 VQFLDGGRPSLIAEPIY-VEGIK---NGIPVELALQY-NDSYAENVHSYVNNINTHEGGT 291
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
HI G + LTRTL + KS +K+ ++G+ REGLT ++SV+V P+FEGQTKT+L
Sbjct: 292 HIAGFRRGLTRTLKAYADKSGLLKNVKFEITGDDFREGLTAVVSVKVQEPQFEGQTKTKL 351
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV VD +V E L YLE +P I++K + A A AA++AR++V++KSV+
Sbjct: 352 GNSEVMGAVDVAVGEALNNYLEENPREAKLIVNKVILAATARAAARKAREMVQRKSVMGG 411
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S LPGKLADCS + PE+ EI++VEGDSAGG+AKQGRDR FQAILPL+GKILNVE+ E
Sbjct: 412 SGLPGKLADCSDSDPEKCEIYLVEGDSAGGTAKQGRDRNFQAILPLKGKILNVEKAMEHK 471
Query: 533 MYKNEEIQNLIRALGLGVKG-EDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
+Y+N+EI+N+ ALG+ + ED K LRYHK++I+TDAD+DG+HI TL+LTFF+R
Sbjct: 472 IYENDEIKNMFTALGVSIGTPEDDKALNLTKLRYHKVVIMTDADIDGSHITTLILTFFFR 531
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKG 644
Y K L + G +Y+ PPLY+V++GK+ +YC++ DA ++++K + +++ IQR+KG
Sbjct: 532 YMKALIEAGYVYIAAPPLYQVKKGKEHEYCWNDQQRDAAVQRLKGAGKEESVH-IQRYKG 590
Query: 645 LGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
LGEM QLW+TTLNP+ R L Q IE+AAE + FS LMG V R++ I+ A +
Sbjct: 591 LGEMNAEQLWDTTLNPQTRTLLQATIENAAECDHTFSMLMGDEVGPRRDFIERNAKYAKI 650
Query: 705 D 705
D
Sbjct: 651 D 651
>gi|257885591|ref|ZP_05665244.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501]
gi|257821447|gb|EEV48577.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501]
Length = 648
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 439/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFTPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV++LN +
Sbjct: 185 TETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYEGGIKSYVEYLNAN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QLWETT++
Sbjct: 541 PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD 600
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 601 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|448591298|ref|ZP_21650899.1| DNA gyrase subunit B [Haloferax elongans ATCC BAA-1513]
gi|445733557|gb|ELZ85124.1| DNA gyrase subunit B [Haloferax elongans ATCC BAA-1513]
Length = 639
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/635 (50%), Positives = 432/635 (68%), Gaps = 22/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV L
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVTLHE 66
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ADN IP+D H N+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADNGRGIPVDTHEQYNRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV + RDG +H ++ +G+PV V ++ + GT I FWPD ++F T
Sbjct: 125 NALSTELEVEIMRDGAVWHHRFEKGEPVQGAFERVRDMEPDEETGTTITFWPDNEIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F T+ R+RELAFLN + I+L E S+ + + + F GG+ E+V++L+ K
Sbjct: 185 -DFTFKTLETRLRELAFLNSGVEISLTDERSE----ESSTFMFEGGIREFVEYLDETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYEDETEGIAVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSEGMLSDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESIT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L Y E +PDV +I+SK++ A +A AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 359 HEKLGTYFEENPDVATAIISKAVEAARARKAAKKAEELTRRKSALESTALPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P +SE+F+VEGDSAGGSAKQGRDR FQAILP++GKILNVE+ + +N E++ LI A
Sbjct: 419 DPSKSELFVVEGDSAGGSAKQGRDREFQAILPIKGKILNVEKHRLDRILENNEVRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G+ G++F + RY +II++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGAGI-GDEFDIDDARYQRIILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVE-RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LY+V RG ++ + ++ N +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 538 LYRVRYRGNTYDAMTEEDRDRIIEEKCNGNPT-QVQRFKGLGEMNPDQLWETTMNPENRV 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LK++ +EDAA A+ +FS LMG V+ RK+ I++ A
Sbjct: 597 LKRITVEDAAAADRMFSILMGDAVEPRKQFIKDHA 631
>gi|373494049|ref|ZP_09584655.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
gi|371969183|gb|EHO86634.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
Length = 641
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/648 (49%), Positives = 437/648 (67%), Gaps = 23/648 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V+ Y + QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYE++DN+VDEA AGY +
Sbjct: 4 EEKVNTQYDAAQIQVLEGLEAVRKRPGMYIGSTGARGLHHLVYEVVDNSVDEALAGYCKH 63
Query: 130 IEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I++ + D S+ P+D HP A+E + TVLHAGGKFGG S LH
Sbjct: 64 IKIIINKDGSLTVEDDGRGMPVDNHPKLGIPAVEVIHTVLHAGGKFGGGGYKVSGG--LH 121
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 240
GVG SVVNALS + V + R+G Y Q+Y RGK VT L + G++ FWPD
Sbjct: 122 GVGASVVNALSTDMVVEIKRNGKIYRQEYKRGKTVTPLEV----IGESKSTGSKTTFWPD 177
Query: 241 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 300
++F T I+FD++T+ R RE+AFLN + I++ E P+K + + + GGL+EYV +
Sbjct: 178 AEIFET-IEFDYDTLQHRFREMAFLNKGIKISITDERDTPKKKEV--FHYEGGLKEYVHY 234
Query: 301 LNTDKKPLH-DVVGFR-KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
+N +K+ LH +V+ F ++ + + +++ALQ+ +D Y++ +L YAN+I T DGGTH+ G+K
Sbjct: 235 INQNKEVLHKEVIYFEVENKNSMEVEVALQY-TDRYNEFILSYANNINTTDGGTHMAGLK 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
++LTR +N KKSK +KD D +LSGE +REG+T I+SV++ P+FEGQTK +LGN EVR
Sbjct: 294 SALTRAINDYAKKSKILKDSDPALSGEDIREGITAIVSVKLAQPQFEGQTKAKLGNSEVR 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
V+ + + LT YLE HP I+ K + A +A AA++ARD+ R+K+ L S+SLPGK
Sbjct: 354 GFVETATNDNLTAYLEEHPQEAKIIIEKCIRASRAREAARKARDITRRKNALDSTSLPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCS P SEIF+VEGDSAGGSAKQGRDR QA+LPLRGKILNVE+ + +EE
Sbjct: 414 LADCSEKDPALSEIFLVEGDSAGGSAKQGRDRSRQAVLPLRGKILNVEKARLDKILNSEE 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+N+I A G GV G DF LRYHKIII+TDADVDGAHIRTLLLTFF+R+ L + G
Sbjct: 474 IKNMITAFGCGV-GNDFDASKLRYHKIIIMTDADVDGAHIRTLLLTFFFRHMTPLIEGGY 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETT 657
+Y PPL+ ++GK V Y Y + E K+ + IQR+KGLGEM QLWETT
Sbjct: 533 VYAAKPPLFMTKQGKDVYYTYSEPEQDKLLAELSGKKTKIDIQRYKGLGEMDFHQLWETT 592
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
++ R L Q+ ++DA++A+ +F+ LMG +V RK+ I++ A +D
Sbjct: 593 MDFNNRTLVQITMDDASQADEIFTILMGDKVPPRKKFIEDNAKYAEID 640
>gi|34541335|ref|NP_905814.1| DNA gyrase subunit B [Porphyromonas gingivalis W83]
gi|188994277|ref|YP_001928529.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277]
gi|334146408|ref|YP_004509335.1| DNA gyrase subunit B [Porphyromonas gingivalis TDC60]
gi|419970237|ref|ZP_14485743.1| DNA gyrase, B subunit [Porphyromonas gingivalis W50]
gi|34397651|gb|AAQ66713.1| DNA gyrase, B subunit [Porphyromonas gingivalis W83]
gi|188593957|dbj|BAG32932.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277]
gi|333803562|dbj|BAK24769.1| DNA gyrase, B subunit [Porphyromonas gingivalis TDC60]
gi|392611239|gb|EIW93981.1| DNA gyrase, B subunit [Porphyromonas gingivalis W50]
Length = 654
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 308/659 (46%), Positives = 434/659 (65%), Gaps = 27/659 (4%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E K+N + Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AG
Sbjct: 3 EDIKKNTSASEYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAG 62
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
Y N+EV + DNSI P+D H KSALE VLTVLHAGGKF S Y VS
Sbjct: 63 YCDNVEVIIEEDNSITVRDNGRGIPVDYHEKEGKSALEVVLTVLHAGGKFDKGS--YKVS 120
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVG+S VNALS L V+R+G + Q++S GKP+ + + S +R GT I+
Sbjct: 121 GGLHGVGVSCVNALSTYLRAEVYRNGKIHMQEFSCGKPLHDVEV----IGSTERTGTTIQ 176
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ-YNEYFFAG--G 293
F PD +F+ ++ ++ +A R+REL++LN +T+ L + + E Y + F G
Sbjct: 177 FKPDSSIFSVT-EYQYSILAKRLRELSYLNAGITLTLTDKRTLKEDGSGYKQDVFRSEEG 235
Query: 294 LEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
L+E+V+ L+ K+PL D V+ + GI +++A+ + + +Y + + Y N I TI+GGT
Sbjct: 236 LKEFVRHLDRMKEPLVDNVIHIVTEKQGIPVEVAMTYNT-SYLENVYSYVNDINTIEGGT 294
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H+ G + LTRTL SK + + ++G+ REGLT +IS++V P+FEGQTKT+L
Sbjct: 295 HLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGLTAVISIKVAEPQFEGQTKTKL 354
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN EV VD +V E L YLE HP I+ K + A A AA++AR++V++KS L
Sbjct: 355 GNNEVTGAVDMAVSEALEYYLEEHPKEAKLIVDKVVLAATARQAARKAREMVQRKSPLSG 414
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
LPGKLADCSS PE+ E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +
Sbjct: 415 GGLPGKLADCSSKDPEQCELFLVEGDSAGGTAKQGRDREFQAILPLRGKILNVEKAMQHK 474
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYR 588
++++EEI+N+ ALG+ + E+ K LRYHK++I+TDADVDG+HI TL+LTFF+R
Sbjct: 475 VFESEEIRNIYTALGVTIGTEEDSKALNLSKLRYHKVVIMTDADVDGSHIATLILTFFFR 534
Query: 589 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP--SNALYSIQRFKGLG 646
+TL + G +++ PPLY ++GK+ +YC+ + + + + + + +QR+KGLG
Sbjct: 535 NMRTLIENGYVFIATPPLYLCKKGKEQEYCWTEQQRQAFVDRYADGNESRVHVQRYKGLG 594
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
EM QLWETT++PE+R L+++ IE+AAEA+ +FS LMG V R+E I+ A +D
Sbjct: 595 EMNEEQLWETTMDPEKRTLRKVTIENAAEADAIFSMLMGDEVGPRREFIEENATYARID 653
>gi|116332686|ref|YP_794213.1| DNA gyrase, B subunit [Lactobacillus brevis ATCC 367]
gi|116098033|gb|ABJ63182.1| DNA gyrase subunit B [Lactobacillus brevis ATCC 367]
Length = 647
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 321/643 (49%), Positives = 418/643 (65%), Gaps = 19/643 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG+A I V
Sbjct: 12 AREYDASQIQVLEGLEAVRKRPGMYIGSTSSQGLHHLVWEIVDNGIDEALAGFADEIHVT 71
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI PI + T K ALETV T+LHAGGKFGG S LHGVG
Sbjct: 72 VNQDNSITVTDNGRGIPIGIQKKTGKPALETVFTILHAGGKFGGGGYKVSGG--LHGVGA 129
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD-SKDRQGTRIRFWPDKQV 243
SVVNALS LE V RDG Y + G T + HV+ +D+ GT + F PD +
Sbjct: 130 SVVNALSTDLEAQVTRDGKTYAIAFDHGHVKTPM--HVIKEGLPQDQHGTAVHFLPDPDI 187
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F FD T+ RIRELAFLN L I +R D PEK ++ + GG+ YV +LN
Sbjct: 188 FRETTVFDIKTLTTRIRELAFLNKGLRITIR--DERPEKPTEEDFLYEGGIRHYVDYLNE 245
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K+ L + + +GIT+++ALQ+ D Y + +L + N+I T +GGTH EG K +LT
Sbjct: 246 NKETLFEPPIYVEGQENGITVEVALQYTDD-YHNNLLTFTNNIHTYEGGTHEEGFKRALT 304
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N +++K +KD + +L+G+ VREGLT ++SV+ P+P+FEGQTKT+LGN + R VD
Sbjct: 305 RVVNDYARQNKLMKDNEANLTGDDVREGLTAVVSVKHPDPQFEGQTKTKLGNSDARTAVD 364
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ ++ ++ HPDV I+ K A KA +AAKRAR++ R+KS L S+LPGKLAD
Sbjct: 365 HTFADHFMRFMMEHPDVARKIVDKGTLASKARVAAKRAREVTRKKSGLEISNLPGKLADN 424
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+S PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NEEI++L
Sbjct: 425 TSKDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDRILANEEIRSL 484
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G DF + YHK+I++TDADVDGAHIRTLLLT YRY + L D G +Y+
Sbjct: 485 FTAMGTGF-GNDFDVSKVNYHKLILMTDADVDGAHIRTLLLTLVYRYMRPLLDAGFVYIA 543
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY+V +GK +Y D ELK + P + IQR+KGLGEM QLWETT+NPE
Sbjct: 544 CPPLYRVRQGKMQRYLDSDEELKDLLGQLPPSPKPQIQRYKGLGEMDAEQLWETTMNPEN 603
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R L ++ +DA A+ VF+ LMG +V R+E I+N A LD
Sbjct: 604 RRLLRVDAQDAINADQVFTMLMGDKVAPRREFIENNATFAELD 646
>gi|330997801|ref|ZP_08321636.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841]
gi|329569689|gb|EGG51454.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841]
Length = 655
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/656 (47%), Positives = 431/656 (65%), Gaps = 37/656 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE +DN++DEA AGY ++IEV +
Sbjct: 10 NYSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDNGRGIPVDMHEKEHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y GKP+ + V + +GTR +FWPD +F T
Sbjct: 128 VNALSTHMLSQVFREGKIYQQEYECGKPLYPVKV----VGETELRGTRQQFWPDSSIFIT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
+ + +A R+RELAFLN +TI L + E+ P ++ GL+E+V+++
Sbjct: 184 TT-YKYEILANRMRELAFLNAGITIILTDMREKDENGVPRSETFHS---KDGLKEFVRYI 239
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
++ + L +DV+ + G+ I++A+ + ++ Y++ + Y N+I TI+GGTH+ G + +
Sbjct: 240 DSSRIHLFNDVIYLNTEKQGVPIEVAIMY-NNGYTENIHSYVNNINTIEGGTHLAGFRTA 298
Query: 361 LTRTL-----NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
LTRTL + K+ + ++ + +SGE REGLT +IS++V P+FEGQTKT+LGN
Sbjct: 299 LTRTLKKYAEDEYAKELEKLEKNKVEISGEDFREGLTAVISIKVAEPQFEGQTKTKLGNS 358
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EV V Q+V E L+ YLE HP I+ K + A A +AA++AR+ V++KS + +
Sbjct: 359 EVAGAVQQAVGEALSYYLEEHPKEAKLIVDKVILAATARVAARKARESVQRKSPMSGGGM 418
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS E+FIVEGDSAGGSAKQGR R++QAILP+RGKI NVER ++
Sbjct: 419 PGKLADCSDKDAANCELFIVEGDSAGGSAKQGRSRQYQAILPIRGKIFNVERVMWHKAFE 478
Query: 536 NEEIQNLIRALGLGVK-GEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+EE+ N+I+ALG+ GED K+ E LRY+K+II+TDADVDG+HI TLL+T FYRY
Sbjct: 479 HEEVNNIIQALGVRFGLGEDSKEANYEKLRYYKVIIMTDADVDGSHIDTLLMTLFYRYMP 538
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP--SNALYSIQRFKGLGEMM 649
L +G +Y+ PPLY+ ++GK +YCY +A+ + + S + QR+KGLGEM
Sbjct: 539 ELIQKGHLYIATPPLYRCKKGKIEEYCYTEADRLRFMQQYNNGSEQGMTTQRYKGLGEMN 598
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT+NPE R+LKQ+ IEDAA A+ VFS LMG V R+E I+ A N+D
Sbjct: 599 PEQLWETTMNPETRLLKQVTIEDAAGADYVFSMLMGEDVGPRREFIEQNATYANID 654
>gi|110803693|ref|YP_697357.1| DNA gyrase subunit B [Clostridium perfringens SM101]
gi|110684194|gb|ABG87564.1| DNA gyrase, B subunit [Clostridium perfringens SM101]
Length = 638
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/647 (50%), Positives = 446/647 (68%), Gaps = 30/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V
Sbjct: 6 NQNYDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVY 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+ +HP K +E ++TVLHAGGKFGG S LHGVG
Sbjct: 66 IHKDNSITVVDDGRGMPVGIHPKMGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EV V RDG + Q Y RG +T L + + GT++ F PD ++F
Sbjct: 124 SVVNALSELCEVIVTRDGYVWKQSYKRGAVLTGLE----KIGEAEGSGTKVHFKPDHEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++D ++ R+RELAFLN + I L E D K + Y + GG++ +V +LN +
Sbjct: 180 EET-EYDFEILSQRLRELAFLNKGINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRN 236
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+ LHD V G + DGI ++++LQ+ D +++ + +AN+I T++GGTH+ G K +
Sbjct: 237 KEVLHDEPIYVEGLK---DGIAVEVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTA 292
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N G++ +K+ D +LSG+ +REGLT ++SV++ P+FEGQTKT+LGN EVR
Sbjct: 293 LTRVMNDYGRRFGHLKESDKNLSGDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRSA 352
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD E ++ +LE +P+V I+ K+L A +A AA+RAR+L R KSVL SSLPGKLA
Sbjct: 353 VDSISGEGISTFLEENPEVGKIIIEKALLASRAREAARRARELTR-KSVLERSSLPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P+E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + ++ I+
Sbjct: 412 DCSSKDPKECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIR 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+++ A+G G+ G +F E +RY++III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y
Sbjct: 472 SMVTAIGAGI-GPEFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVY 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYK+ +GKQ +Y Y DA ++ F ++ ++QR+KGLGEM QLWETT++
Sbjct: 531 IAQPPLYKISKGKQERYAYSDAAADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMD 590
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R+L + IEDA A+ +F+ LMG +V+ R+E IQ NA N+ NLD
Sbjct: 591 PESRILLRADIEDAMVADEIFTILMGDKVEPRREFIQKNAKNVSNLD 637
>gi|153939432|ref|YP_001389375.1| DNA gyrase subunit B [Clostridium botulinum F str. Langeland]
gi|384460465|ref|YP_005673060.1| DNA gyrase subunit B [Clostridium botulinum F str. 230613]
gi|152935328|gb|ABS40826.1| DNA gyrase, B subunit [Clostridium botulinum F str. Langeland]
gi|295317482|gb|ADF97859.1| DNA gyrase, B subunit [Clostridium botulinum F str. 230613]
Length = 637
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 446/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+G + Q++ RG T L V + GT+I F PD ++F
Sbjct: 125 VVNALSEQCEVEVRREGHIWKQRFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F E +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + +IQR+KGLGEM P QLW+TT++PE R
Sbjct: 534 PLYRIFKAKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLGEMNPEQLWDTTMDPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLD 705
L Q+ IEDA A+ +F+ LMG +V+ R+E I+N A+ +VNLD
Sbjct: 594 TLLQVTIEDAMVADEIFTILMGTKVEPRREFIENNADKVVNLD 636
>gi|354611445|ref|ZP_09029401.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
gi|353196265|gb|EHB61767.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
Length = 637
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/634 (50%), Positives = 434/634 (68%), Gaps = 22/634 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAV+KRPAMYIGST RGLHHLVYE++DN++DEA AGY +IEV L
Sbjct: 7 YSAGQIQVLEGLEAVQKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDHIEVTLHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVEDDGRGIPVDTHEEYDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE L V V RDG +Y +K+ RG+PVT L + D GT IRF PD ++F T
Sbjct: 125 NALSERLAVEVERDGGKYREKFERGEPVTDLE----RLGDSDDTGTLIRFRPDSEIFET- 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ FD++T+ R+RELAFLN + I L E D + + + + + GG+ E+V++LN +
Sbjct: 180 LDFDYSTLETRLRELAFLNSGVEITLTDERGD--EVESSTFKYDGGIREFVEYLNESRDA 237
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ F + DGI +++A+Q D S T +AN+I T +GGTH+ G K +LTR +N
Sbjct: 238 LHDDVIYFEDEDDGIQVEIAMQASDDLQSSTH-AFANNINTREGGTHLTGFKTALTRVVN 296
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
++ + + D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN +VR +V+ V
Sbjct: 297 DYANENDLLGELDGENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVEGVV 356
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E + Y E +PD +++ K++ A KA AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 357 HEGIGTYFEENPDTARAVVLKAVEAAKARKAAKKAEELTRRKSALSSTSLPGKLADCQTK 416
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P+++E+FIVEGDSAGGSAKQGR+ FQAILPL GKILNVE+ + ++EE++++I A
Sbjct: 417 DPDDAELFIVEGDSAGGSAKQGRNPEFQAILPLGGKILNVEKHRLDRILEHEELRHIITA 476
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ G++F E LRY I+++TDADVDGAHIRTLLLTFFYR+ K L + G +Y PP
Sbjct: 477 LGTGI-GDEFDIENLRYKNIVMMTDADVDGAHIRTLLLTFFYRHMKPLLEGGFVYAAQPP 535
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY++ + +A+ +++ +QRFKGLGEM P QLW+TT++PE R+L
Sbjct: 536 LYRIRYRGETYDAMTEADRERIVEEKCDGNPTQVQRFKGLGEMNPQQLWDTTMDPEHRIL 595
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
K++ +EDAA A+ +FS LMG V+ RK IQ A
Sbjct: 596 KRITVEDAAAADKMFSVLMGDAVEPRKRFIQENA 629
>gi|414074131|ref|YP_006999348.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
gi|413974051|gb|AFW91515.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
Length = 651
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/649 (48%), Positives = 442/649 (68%), Gaps = 25/649 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F PD ++
Sbjct: 129 SSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEI 184
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 304 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N+ K++K +K+ +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENGDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRSL 482
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 483 FTAMGTGFGG-DYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIA 541
Query: 603 VPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWET 656
PP+Y ++ G + + E L++ + + ++QR+KGLGEM QLWET
Sbjct: 542 QPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWET 601
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 602 TMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|281424989|ref|ZP_06255902.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|299142183|ref|ZP_07035316.1| DNA gyrase, B subunit [Prevotella oris C735]
gi|281400833|gb|EFB31664.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|298576272|gb|EFI48145.1| DNA gyrase, B subunit [Prevotella oris C735]
Length = 656
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/654 (47%), Positives = 434/654 (66%), Gaps = 34/654 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +++E+ L
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVEITLNE 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS + V+RDG Y Q+Y +GKP+ + V ++GTR +FWPD VFTT
Sbjct: 129 NALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTVFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 306
+ + +A R+RELA+LN + I L + E E F A GL+E+V++++ +
Sbjct: 185 T-YKWDIVASRMRELAYLNAGIRITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 366 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADAEPTIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E L+ YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLAD
Sbjct: 363 QQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKSVMTGGGLPGKLAD 422
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ P+E EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N
Sbjct: 423 CSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMN 482
Query: 542 LIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + ++
Sbjct: 483 IIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIED 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPV 651
G +Y+ PPLYK K +YCY + + K V+ +L++ QR+KGLGEM P
Sbjct: 543 GHLYIATPPLYKCTYKKASEYCYTEQQRQAFIDKYVEGKEDDKSLHT-QRYKGLGEMNPE 601
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ I++AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 QLWETTMDPKSRLLKQVTIQNAAEADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|69246710|ref|ZP_00604078.1| DNA gyrase, B subunit [Enterococcus faecium DO]
gi|227550644|ref|ZP_03980693.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330]
gi|257878650|ref|ZP_05658303.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933]
gi|257881316|ref|ZP_05660969.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502]
gi|257888091|ref|ZP_05667744.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733]
gi|257890533|ref|ZP_05670186.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410]
gi|257893108|ref|ZP_05672761.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408]
gi|257896291|ref|ZP_05675944.1| DNA gyrase B subunit [Enterococcus faecium Com12]
gi|257899275|ref|ZP_05678928.1| DNA gyrase B subunit [Enterococcus faecium Com15]
gi|260558231|ref|ZP_05830427.1| DNA gyrase B subunit [Enterococcus faecium C68]
gi|261206921|ref|ZP_05921610.1| DNA gyrase B subunit [Enterococcus faecium TC 6]
gi|289566502|ref|ZP_06446926.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF]
gi|293379372|ref|ZP_06625516.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1]
gi|293553551|ref|ZP_06674178.1| DNA gyrase, B subunit [Enterococcus faecium E1039]
gi|293563255|ref|ZP_06677707.1| DNA gyrase, B subunit [Enterococcus faecium E1162]
gi|293569155|ref|ZP_06680461.1| DNA gyrase, B subunit [Enterococcus faecium E1071]
gi|293572722|ref|ZP_06683686.1| DNA gyrase, B subunit [Enterococcus faecium E980]
gi|294616655|ref|ZP_06696426.1| DNA gyrase, B subunit [Enterococcus faecium E1636]
gi|294619749|ref|ZP_06699154.1| DNA gyrase, B subunit [Enterococcus faecium E1679]
gi|294623763|ref|ZP_06702591.1| DNA gyrase, B subunit [Enterococcus faecium U0317]
gi|314940127|ref|ZP_07847307.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04]
gi|314943042|ref|ZP_07849846.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C]
gi|314948160|ref|ZP_07851556.1| DNA gyrase, B subunit [Enterococcus faecium TX0082]
gi|314953426|ref|ZP_07856344.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A]
gi|314993835|ref|ZP_07859171.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B]
gi|314998140|ref|ZP_07863022.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01]
gi|383327325|ref|YP_005353209.1| DNA gyrase subunit B, GyrB [Enterococcus faecium Aus0004]
gi|389867188|ref|YP_006374611.1| DNA topoisomerase subunit B [Enterococcus faecium DO]
gi|406580334|ref|ZP_11055544.1| DNA gyrase subunit B [Enterococcus sp. GMD4E]
gi|406589608|ref|ZP_11064039.1| DNA gyrase subunit B [Enterococcus sp. GMD1E]
gi|415892741|ref|ZP_11549986.1| DNA gyrase, B subunit [Enterococcus faecium E4453]
gi|416143534|ref|ZP_11599808.1| DNA gyrase, B subunit [Enterococcus faecium E4452]
gi|424764533|ref|ZP_18191957.1| DNA gyrase, B subunit [Enterococcus faecium TX1337RF]
gi|424793316|ref|ZP_18219441.1| DNA gyrase, B subunit [Enterococcus faecium V689]
gi|424806872|ref|ZP_18232295.1| DNA gyrase, B subunit [Enterococcus faecium S447]
gi|424819243|ref|ZP_18244369.1| DNA gyrase, B subunit [Enterococcus faecium R501]
gi|424857928|ref|ZP_18282007.1| DNA gyrase, B subunit [Enterococcus faecium R499]
gi|424907540|ref|ZP_18331019.1| DNA gyrase, B subunit [Enterococcus faecium R497]
gi|424951452|ref|ZP_18366546.1| DNA gyrase, B subunit [Enterococcus faecium R496]
gi|424953295|ref|ZP_18368268.1| DNA gyrase, B subunit [Enterococcus faecium R494]
gi|424957793|ref|ZP_18372500.1| DNA gyrase, B subunit [Enterococcus faecium R446]
gi|424962333|ref|ZP_18376695.1| DNA gyrase, B subunit [Enterococcus faecium P1986]
gi|424963547|ref|ZP_18377757.1| DNA gyrase, B subunit [Enterococcus faecium P1190]
gi|424967254|ref|ZP_18380961.1| DNA gyrase, B subunit [Enterococcus faecium P1140]
gi|424971814|ref|ZP_18385222.1| DNA gyrase, B subunit [Enterococcus faecium P1139]
gi|424975900|ref|ZP_18389027.1| DNA gyrase, B subunit [Enterococcus faecium P1137]
gi|424978603|ref|ZP_18391513.1| DNA gyrase, B subunit [Enterococcus faecium P1123]
gi|424981750|ref|ZP_18394460.1| DNA gyrase, B subunit [Enterococcus faecium ERV99]
gi|424984817|ref|ZP_18397334.1| DNA gyrase, B subunit [Enterococcus faecium ERV69]
gi|424988996|ref|ZP_18401285.1| DNA gyrase, B subunit [Enterococcus faecium ERV38]
gi|424990981|ref|ZP_18403164.1| DNA gyrase, B subunit [Enterococcus faecium ERV26]
gi|424996499|ref|ZP_18408302.1| DNA gyrase, B subunit [Enterococcus faecium ERV168]
gi|424999013|ref|ZP_18410666.1| DNA gyrase, B subunit [Enterococcus faecium ERV165]
gi|425002204|ref|ZP_18413652.1| DNA gyrase, B subunit [Enterococcus faecium ERV161]
gi|425005667|ref|ZP_18416888.1| DNA gyrase, B subunit [Enterococcus faecium ERV102]
gi|425008322|ref|ZP_18419408.1| DNA gyrase, B subunit [Enterococcus faecium ERV1]
gi|425012513|ref|ZP_18423323.1| DNA gyrase, B subunit [Enterococcus faecium E422]
gi|425013671|ref|ZP_18424390.1| DNA gyrase, B subunit [Enterococcus faecium E417]
gi|425016674|ref|ZP_18427223.1| DNA gyrase, B subunit [Enterococcus faecium C621]
gi|425020979|ref|ZP_18431264.1| DNA gyrase, B subunit [Enterococcus faecium C497]
gi|425024300|ref|ZP_18434373.1| DNA gyrase, B subunit [Enterococcus faecium C1904]
gi|425033613|ref|ZP_18438567.1| DNA gyrase, B subunit [Enterococcus faecium 515]
gi|425034562|ref|ZP_18439445.1| DNA gyrase, B subunit [Enterococcus faecium 514]
gi|425040395|ref|ZP_18444869.1| DNA gyrase, B subunit [Enterococcus faecium 513]
gi|425040652|ref|ZP_18445107.1| DNA gyrase, B subunit [Enterococcus faecium 511]
gi|425047072|ref|ZP_18451049.1| DNA gyrase, B subunit [Enterococcus faecium 510]
gi|425050522|ref|ZP_18454260.1| DNA gyrase, B subunit [Enterococcus faecium 509]
gi|425053384|ref|ZP_18456930.1| DNA gyrase, B subunit [Enterococcus faecium 506]
gi|425054280|ref|ZP_18457792.1| DNA gyrase, B subunit [Enterococcus faecium 505]
gi|425057355|ref|ZP_18460778.1| DNA gyrase, B subunit [Enterococcus faecium 504]
gi|425062497|ref|ZP_18465650.1| DNA gyrase, B subunit [Enterococcus faecium 503]
gi|427396885|ref|ZP_18889511.1| DNA gyrase subunit B [Enterococcus durans FB129-CNAB-4]
gi|430820786|ref|ZP_19439408.1| DNA gyrase subunit B [Enterococcus faecium E0045]
gi|430823214|ref|ZP_19441786.1| DNA gyrase subunit B [Enterococcus faecium E0120]
gi|430826501|ref|ZP_19444683.1| DNA gyrase subunit B [Enterococcus faecium E0164]
gi|430828712|ref|ZP_19446829.1| DNA gyrase subunit B [Enterococcus faecium E0269]
gi|430831766|ref|ZP_19449814.1| DNA gyrase subunit B [Enterococcus faecium E0333]
gi|430834919|ref|ZP_19452921.1| DNA gyrase subunit B [Enterococcus faecium E0679]
gi|430836323|ref|ZP_19454304.1| DNA gyrase subunit B [Enterococcus faecium E0680]
gi|430839252|ref|ZP_19457193.1| DNA gyrase subunit B [Enterococcus faecium E0688]
gi|430842549|ref|ZP_19460462.1| DNA gyrase subunit B [Enterococcus faecium E1007]
gi|430843001|ref|ZP_19460903.1| DNA gyrase subunit B [Enterococcus faecium E1050]
gi|430848164|ref|ZP_19465991.1| DNA gyrase subunit B [Enterococcus faecium E1133]
gi|430850647|ref|ZP_19468404.1| DNA gyrase subunit B [Enterococcus faecium E1185]
gi|430853333|ref|ZP_19471063.1| DNA gyrase subunit B [Enterococcus faecium E1258]
gi|430855826|ref|ZP_19473532.1| DNA gyrase subunit B [Enterococcus faecium E1392]
gi|430859054|ref|ZP_19476672.1| DNA gyrase subunit B [Enterococcus faecium E1552]
gi|430861179|ref|ZP_19478768.1| DNA gyrase subunit B [Enterococcus faecium E1573]
gi|430866247|ref|ZP_19481524.1| DNA gyrase subunit B [Enterococcus faecium E1574]
gi|430888509|ref|ZP_19484382.1| DNA gyrase subunit B [Enterococcus faecium E1575]
gi|430952221|ref|ZP_19486264.1| DNA gyrase subunit B [Enterococcus faecium E1576]
gi|430998689|ref|ZP_19488072.1| DNA gyrase subunit B [Enterococcus faecium E1578]
gi|431036317|ref|ZP_19492087.1| DNA gyrase subunit B [Enterococcus faecium E1590]
gi|431213196|ref|ZP_19501061.1| DNA gyrase subunit B [Enterococcus faecium E1620]
gi|431235057|ref|ZP_19503080.1| DNA gyrase subunit B [Enterococcus faecium E1622]
gi|431255558|ref|ZP_19504681.1| DNA gyrase subunit B [Enterococcus faecium E1623]
gi|431303596|ref|ZP_19508443.1| DNA gyrase subunit B [Enterococcus faecium E1626]
gi|431506942|ref|ZP_19515768.1| DNA gyrase subunit B [Enterococcus faecium E1634]
gi|431545128|ref|ZP_19518769.1| DNA gyrase subunit B [Enterococcus faecium E1731]
gi|431592395|ref|ZP_19521631.1| DNA gyrase subunit B [Enterococcus faecium E1861]
gi|431726687|ref|ZP_19525438.1| DNA gyrase subunit B [Enterococcus faecium E1904]
gi|431739124|ref|ZP_19528064.1| DNA gyrase subunit B [Enterococcus faecium E1972]
gi|431740593|ref|ZP_19529505.1| DNA gyrase subunit B [Enterococcus faecium E2039]
gi|431743908|ref|ZP_19532781.1| DNA gyrase subunit B [Enterococcus faecium E2071]
gi|431747293|ref|ZP_19536091.1| DNA gyrase subunit B [Enterococcus faecium E2134]
gi|431749480|ref|ZP_19538220.1| DNA gyrase subunit B [Enterococcus faecium E2297]
gi|431756019|ref|ZP_19544661.1| DNA gyrase subunit B [Enterococcus faecium E2883]
gi|431758014|ref|ZP_19546643.1| DNA gyrase subunit B [Enterococcus faecium E3083]
gi|431763280|ref|ZP_19551833.1| DNA gyrase subunit B [Enterococcus faecium E3548]
gi|431764847|ref|ZP_19553375.1| DNA gyrase subunit B [Enterococcus faecium E4215]
gi|431768128|ref|ZP_19556569.1| DNA gyrase subunit B [Enterococcus faecium E1321]
gi|431769369|ref|ZP_19557779.1| DNA gyrase subunit B [Enterococcus faecium E1644]
gi|431774627|ref|ZP_19562933.1| DNA gyrase subunit B [Enterococcus faecium E2369]
gi|431777539|ref|ZP_19565792.1| DNA gyrase subunit B [Enterococcus faecium E2560]
gi|431779780|ref|ZP_19567971.1| DNA gyrase subunit B [Enterococcus faecium E4389]
gi|431782442|ref|ZP_19570575.1| DNA gyrase subunit B [Enterococcus faecium E6012]
gi|431784263|ref|ZP_19572305.1| DNA gyrase subunit B [Enterococcus faecium E6045]
gi|447911526|ref|YP_007392938.1| DNA gyrase subunit B [Enterococcus faecium NRRL B-2354]
gi|68195124|gb|EAN09583.1| DNA gyrase, B subunit [Enterococcus faecium DO]
gi|227180223|gb|EEI61195.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330]
gi|257812878|gb|EEV41636.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933]
gi|257816974|gb|EEV44302.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502]
gi|257824145|gb|EEV51077.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733]
gi|257826893|gb|EEV53519.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410]
gi|257829487|gb|EEV56094.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408]
gi|257832856|gb|EEV59277.1| DNA gyrase B subunit [Enterococcus faecium Com12]
gi|257837187|gb|EEV62261.1| DNA gyrase B subunit [Enterococcus faecium Com15]
gi|260075405|gb|EEW63711.1| DNA gyrase B subunit [Enterococcus faecium C68]
gi|260078549|gb|EEW66251.1| DNA gyrase B subunit [Enterococcus faecium TC 6]
gi|289161711|gb|EFD09587.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF]
gi|291588124|gb|EFF19966.1| DNA gyrase, B subunit [Enterococcus faecium E1071]
gi|291590475|gb|EFF22213.1| DNA gyrase, B subunit [Enterococcus faecium E1636]
gi|291594019|gb|EFF25488.1| DNA gyrase, B subunit [Enterococcus faecium E1679]
gi|291596717|gb|EFF27940.1| DNA gyrase, B subunit [Enterococcus faecium U0317]
gi|291602306|gb|EFF32531.1| DNA gyrase, B subunit [Enterococcus faecium E1039]
gi|291604794|gb|EFF34276.1| DNA gyrase, B subunit [Enterococcus faecium E1162]
gi|291607214|gb|EFF36572.1| DNA gyrase, B subunit [Enterococcus faecium E980]
gi|292641895|gb|EFF60061.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1]
gi|313587852|gb|EFR66697.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01]
gi|313591726|gb|EFR70571.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B]
gi|313594529|gb|EFR73374.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A]
gi|313598242|gb|EFR77087.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C]
gi|313640632|gb|EFS05212.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04]
gi|313645414|gb|EFS09994.1| DNA gyrase, B subunit [Enterococcus faecium TX0082]
gi|364089253|gb|EHM31959.1| DNA gyrase, B subunit [Enterococcus faecium E4452]
gi|364093162|gb|EHM35462.1| DNA gyrase, B subunit [Enterococcus faecium E4453]
gi|378937019|gb|AFC62091.1| DNA gyrase subunit B, GyrB [Enterococcus faecium Aus0004]
gi|388532437|gb|AFK57629.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus faecium
DO]
gi|402419086|gb|EJV51368.1| DNA gyrase, B subunit [Enterococcus faecium TX1337RF]
gi|402916434|gb|EJX37312.1| DNA gyrase, B subunit [Enterococcus faecium V689]
gi|402918795|gb|EJX39457.1| DNA gyrase, B subunit [Enterococcus faecium S447]
gi|402926543|gb|EJX46578.1| DNA gyrase, B subunit [Enterococcus faecium R501]
gi|402927798|gb|EJX47727.1| DNA gyrase, B subunit [Enterococcus faecium R499]
gi|402930071|gb|EJX49768.1| DNA gyrase, B subunit [Enterococcus faecium R496]
gi|402930131|gb|EJX49822.1| DNA gyrase, B subunit [Enterococcus faecium R497]
gi|402939453|gb|EJX58361.1| DNA gyrase, B subunit [Enterococcus faecium R494]
gi|402940985|gb|EJX59747.1| DNA gyrase, B subunit [Enterococcus faecium P1986]
gi|402942732|gb|EJX61297.1| DNA gyrase, B subunit [Enterococcus faecium R446]
gi|402948841|gb|EJX66943.1| DNA gyrase, B subunit [Enterococcus faecium P1190]
gi|402952373|gb|EJX70195.1| DNA gyrase, B subunit [Enterococcus faecium P1137]
gi|402954780|gb|EJX72367.1| DNA gyrase, B subunit [Enterococcus faecium P1140]
gi|402957370|gb|EJX74762.1| DNA gyrase, B subunit [Enterococcus faecium P1139]
gi|402961186|gb|EJX78243.1| DNA gyrase, B subunit [Enterococcus faecium P1123]
gi|402962646|gb|EJX79566.1| DNA gyrase, B subunit [Enterococcus faecium ERV99]
gi|402967780|gb|EJX84306.1| DNA gyrase, B subunit [Enterococcus faecium ERV69]
gi|402970149|gb|EJX86510.1| DNA gyrase, B subunit [Enterococcus faecium ERV38]
gi|402973448|gb|EJX89575.1| DNA gyrase, B subunit [Enterococcus faecium ERV168]
gi|402978105|gb|EJX93869.1| DNA gyrase, B subunit [Enterococcus faecium ERV26]
gi|402981075|gb|EJX96629.1| DNA gyrase, B subunit [Enterococcus faecium ERV165]
gi|402983988|gb|EJX99326.1| DNA gyrase, B subunit [Enterococcus faecium ERV161]
gi|402985345|gb|EJY00562.1| DNA gyrase, B subunit [Enterococcus faecium ERV102]
gi|402992806|gb|EJY07473.1| DNA gyrase, B subunit [Enterococcus faecium ERV1]
gi|402992968|gb|EJY07621.1| DNA gyrase, B subunit [Enterococcus faecium E422]
gi|403000484|gb|EJY14601.1| DNA gyrase, B subunit [Enterococcus faecium E417]
gi|403006339|gb|EJY19990.1| DNA gyrase, B subunit [Enterococcus faecium C621]
gi|403007248|gb|EJY20838.1| DNA gyrase, B subunit [Enterococcus faecium C1904]
gi|403007980|gb|EJY21515.1| DNA gyrase, B subunit [Enterococcus faecium C497]
gi|403009200|gb|EJY22663.1| DNA gyrase, B subunit [Enterococcus faecium 515]
gi|403012980|gb|EJY26130.1| DNA gyrase, B subunit [Enterococcus faecium 513]
gi|403020060|gb|EJY32620.1| DNA gyrase, B subunit [Enterococcus faecium 514]
gi|403022573|gb|EJY34930.1| DNA gyrase, B subunit [Enterococcus faecium 510]
gi|403023309|gb|EJY35582.1| DNA gyrase, B subunit [Enterococcus faecium 509]
gi|403028096|gb|EJY39937.1| DNA gyrase, B subunit [Enterococcus faecium 511]
gi|403030615|gb|EJY42292.1| DNA gyrase, B subunit [Enterococcus faecium 506]
gi|403036327|gb|EJY47678.1| DNA gyrase, B subunit [Enterococcus faecium 505]
gi|403038090|gb|EJY49328.1| DNA gyrase, B subunit [Enterococcus faecium 503]
gi|403040679|gb|EJY51739.1| DNA gyrase, B subunit [Enterococcus faecium 504]
gi|404454195|gb|EKA01156.1| DNA gyrase subunit B [Enterococcus sp. GMD4E]
gi|404470572|gb|EKA15193.1| DNA gyrase subunit B [Enterococcus sp. GMD1E]
gi|425722632|gb|EKU85526.1| DNA gyrase subunit B [Enterococcus durans FB129-CNAB-4]
gi|430439172|gb|ELA49544.1| DNA gyrase subunit B [Enterococcus faecium E0045]
gi|430442312|gb|ELA52357.1| DNA gyrase subunit B [Enterococcus faecium E0120]
gi|430445014|gb|ELA54804.1| DNA gyrase subunit B [Enterococcus faecium E0164]
gi|430480407|gb|ELA57581.1| DNA gyrase subunit B [Enterococcus faecium E0333]
gi|430483252|gb|ELA60346.1| DNA gyrase subunit B [Enterococcus faecium E0269]
gi|430484988|gb|ELA61935.1| DNA gyrase subunit B [Enterococcus faecium E0679]
gi|430488450|gb|ELA65121.1| DNA gyrase subunit B [Enterococcus faecium E0680]
gi|430490710|gb|ELA67206.1| DNA gyrase subunit B [Enterococcus faecium E0688]
gi|430492970|gb|ELA69306.1| DNA gyrase subunit B [Enterococcus faecium E1007]
gi|430498055|gb|ELA74063.1| DNA gyrase subunit B [Enterococcus faecium E1050]
gi|430535006|gb|ELA75429.1| DNA gyrase subunit B [Enterococcus faecium E1185]
gi|430535830|gb|ELA76227.1| DNA gyrase subunit B [Enterococcus faecium E1133]
gi|430541155|gb|ELA81332.1| DNA gyrase subunit B [Enterococcus faecium E1258]
gi|430544573|gb|ELA84602.1| DNA gyrase subunit B [Enterococcus faecium E1552]
gi|430546368|gb|ELA86330.1| DNA gyrase subunit B [Enterococcus faecium E1392]
gi|430550212|gb|ELA90009.1| DNA gyrase subunit B [Enterococcus faecium E1573]
gi|430551475|gb|ELA91226.1| DNA gyrase subunit B [Enterococcus faecium E1574]
gi|430556025|gb|ELA95548.1| DNA gyrase subunit B [Enterococcus faecium E1575]
gi|430557356|gb|ELA96815.1| DNA gyrase subunit B [Enterococcus faecium E1576]
gi|430562857|gb|ELB02088.1| DNA gyrase subunit B [Enterococcus faecium E1590]
gi|430563350|gb|ELB02575.1| DNA gyrase subunit B [Enterococcus faecium E1578]
gi|430570449|gb|ELB09409.1| DNA gyrase subunit B [Enterococcus faecium E1620]
gi|430572917|gb|ELB11753.1| DNA gyrase subunit B [Enterococcus faecium E1622]
gi|430577756|gb|ELB16336.1| DNA gyrase subunit B [Enterococcus faecium E1623]
gi|430580237|gb|ELB18717.1| DNA gyrase subunit B [Enterococcus faecium E1626]
gi|430587329|gb|ELB25562.1| DNA gyrase subunit B [Enterococcus faecium E1634]
gi|430592020|gb|ELB30047.1| DNA gyrase subunit B [Enterococcus faecium E1861]
gi|430592176|gb|ELB30198.1| DNA gyrase subunit B [Enterococcus faecium E1731]
gi|430595710|gb|ELB33593.1| DNA gyrase subunit B [Enterococcus faecium E1904]
gi|430596667|gb|ELB34491.1| DNA gyrase subunit B [Enterococcus faecium E1972]
gi|430602963|gb|ELB40507.1| DNA gyrase subunit B [Enterococcus faecium E2039]
gi|430605971|gb|ELB43343.1| DNA gyrase subunit B [Enterococcus faecium E2071]
gi|430606661|gb|ELB44006.1| DNA gyrase subunit B [Enterococcus faecium E2134]
gi|430611477|gb|ELB48564.1| DNA gyrase subunit B [Enterococcus faecium E2297]
gi|430616134|gb|ELB53059.1| DNA gyrase subunit B [Enterococcus faecium E2883]
gi|430618519|gb|ELB55366.1| DNA gyrase subunit B [Enterococcus faecium E3083]
gi|430622974|gb|ELB59684.1| DNA gyrase subunit B [Enterococcus faecium E3548]
gi|430629857|gb|ELB66245.1| DNA gyrase subunit B [Enterococcus faecium E1321]
gi|430629935|gb|ELB66317.1| DNA gyrase subunit B [Enterococcus faecium E4215]
gi|430633837|gb|ELB69988.1| DNA gyrase subunit B [Enterococcus faecium E2369]
gi|430636944|gb|ELB72988.1| DNA gyrase subunit B [Enterococcus faecium E1644]
gi|430639153|gb|ELB75034.1| DNA gyrase subunit B [Enterococcus faecium E2560]
gi|430641348|gb|ELB77157.1| DNA gyrase subunit B [Enterococcus faecium E4389]
gi|430647079|gb|ELB82527.1| DNA gyrase subunit B [Enterococcus faecium E6012]
gi|430649837|gb|ELB85204.1| DNA gyrase subunit B [Enterococcus faecium E6045]
gi|445187235|gb|AGE28877.1| DNA gyrase subunit B [Enterococcus faecium NRRL B-2354]
Length = 648
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 439/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFTPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV++LN +
Sbjct: 185 TETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYDGGIKSYVEYLNAN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QLWETT++
Sbjct: 541 PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD 600
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 601 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|258647794|ref|ZP_05735263.1| DNA gyrase, B subunit [Prevotella tannerae ATCC 51259]
gi|260852245|gb|EEX72114.1| DNA gyrase, B subunit [Prevotella tannerae ATCC 51259]
Length = 653
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/653 (47%), Positives = 430/653 (65%), Gaps = 29/653 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE +DN++DEA AGY ++IEV
Sbjct: 8 SSNYSASNIQVLEGLEAVRKRPAMYIGDISDKGLHHLVYETVDNSIDEALAGYCTHIEVT 67
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+HP ++SALE V+TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 68 ICTDNSIIVQDNGRGIPVDMHPKEHRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGV 125
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
S VNALS+ + V+RDG Y Q+Y +GKP+ + V +GT+ +FWPD VF
Sbjct: 126 SCVNALSKHMTSQVFRDGKIYQQEYEQGKPLYPVKV----VGETQLRGTKQQFWPDDTVF 181
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNT 303
T I ++++T+A R+RELAFLN L I L D E N E F++ GL E+V+++++
Sbjct: 182 TATI-YNYDTLATRMRELAFLNAGLKITLTDLRPDEEGNTKQEEFYSEQGLREFVRYVDS 240
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ L +DV+ + I I++A+ + + +YS+ + Y N+I TI+GGTH+ G + ++T
Sbjct: 241 SRTHLFNDVIYISTNKADIPIEVAIMYNT-SYSENVHSYVNNINTIEGGTHLIGFRQAIT 299
Query: 363 RTLNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
R L +++ K ++ I +SGE REGLT +ISV+V P+FEGQTKTRLGN EV
Sbjct: 300 RVLKKYAEQTAAKQIEKAKIEISGEDFREGLTAVISVKVAEPQFEGQTKTRLGNTEVTGA 359
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V+Q+V E LT YLE HP I+ K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 360 VNQAVGEALTNYLEEHPKEAKLIVDKVILAATARIAARKARESVQRKNPMSGGGLPGKLA 419
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS E+F+VEGDSAGGSAKQ R R QAILPLRGKILNVE+ ++++E+
Sbjct: 420 DCSSKDAAVCELFLVEGDSAGGSAKQARSRTTQAILPLRGKILNVEKAMWHKAFESDEVN 479
Query: 541 NLIRALGLGVKGEDFKKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
N+I+ALG+ ++ KEA LRYHKIII+ DADVDG HI TL++T FYRY + ++
Sbjct: 480 NIIQALGVRFGLDEDSKEANIEKLRYHKIIIMADADVDGQHIATLIMTLFYRYMPQIIED 539
Query: 597 GCIYVGVPPLY--KVERGKQVQYCYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQ 652
G +Y+ +PPLY + ++G +YCY++ + + + +I QR+KGLGEM P Q
Sbjct: 540 GYLYIAMPPLYRCRAKKGHAEEYCYNETARLRFIEQYGDGSEDNITTQRYKGLGEMNPEQ 599
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT+NPE R+LKQ+ +E A A+ FS LMG V R+E I+ A N+D
Sbjct: 600 LWETTMNPETRLLKQVSLESATNADYTFSMLMGEDVGPRREFIEKNATYANID 652
>gi|163786113|ref|ZP_02180561.1| DNA gyrase subunit B [Flavobacteriales bacterium ALC-1]
gi|159877973|gb|EDP72029.1| DNA gyrase subunit B [Flavobacteriales bacterium ALC-1]
Length = 649
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/659 (46%), Positives = 429/659 (65%), Gaps = 35/659 (5%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+F E+ Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG
Sbjct: 6 ESFNEHG----YSADSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEALAG 61
Query: 126 YASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ NI V + DNSI P+ LH SALE V+T + AGGKF S Y VS
Sbjct: 62 HCDNITVTINEDNSITTEDDGRGIPVGLHKKEGVSALEVVMTKIGAGGKFDKDS--YKVS 119
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK---PVTTLTCHVLPVDSKDRQGT 233
GGLHGVG+S VNALSE L+ TV+R+G Y Q+Y RGK PV T D++GT
Sbjct: 120 GGLHGVGVSCVNALSEHLKATVFREGKVYEQEYERGKAMYPVKT-------TGDTDKRGT 172
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG- 292
+ F PD +FT ++++++T+A R+RELA+LN +T+ L + E + F
Sbjct: 173 TVTFKPDSTIFTQTLEYNYDTLASRLRELAYLNKGITVHLIDKRHTKEDGSFEGETFHSK 232
Query: 293 -GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 350
GL+E++++L+ + PL DV+ F + +G+ +++A+ + + +Y++ + Y N+I T +G
Sbjct: 233 EGLKEFIKFLDATRDPLMKDVIAFEGEKNGVPVEVAMIYNT-SYAENLHSYVNNINTHEG 291
Query: 351 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 410
GTH+ G + LT TL S + ++G+ REGLT IISV+V P+FEGQTKT
Sbjct: 292 GTHLSGFRRGLTHTLKKFADSSGMLDKLKFDVAGDDFREGLTAIISVKVQEPQFEGQTKT 351
Query: 411 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 470
+LGN EV V Q+V E LT+YLE HPD +I+ K + A +A AA++AR++V++K+V+
Sbjct: 352 KLGNREVSASVSQAVSEMLTDYLEEHPDDAKTIVQKVILAAQARHAAQKAREMVQRKTVM 411
Query: 471 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 530
LPGKL+DCS PE EI++VEGDSAGG+AK GRDR FQAILPLRGKILNVE+
Sbjct: 412 SIGGLPGKLSDCSEQNPEICEIYLVEGDSAGGTAKMGRDRAFQAILPLRGKILNVEKAMT 471
Query: 531 AAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFF 586
+++NEEI+N+ ALG+ + E+ K LRYHKI+I+ DAD+DG+HI TL+LTFF
Sbjct: 472 HKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYHKIVIMCDADIDGSHIETLILTFF 531
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLG 646
+RY K L + G IY+ PPLY V++G + Y ++D E + + A IQR+KGLG
Sbjct: 532 FRYMKELIENGHIYIATPPLYLVKKGAKKAYAWNDDERMALMDQYGDGA--KIQRYKGLG 589
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
EM +QLW+TT+NPE R L+Q+ I++ EA+ VFS LMG V R+E I+ A N+D
Sbjct: 590 EMNAIQLWDTTMNPEFRTLRQIQIDNGVEADRVFSMLMGDEVPPRREFIEKNAVYANID 648
>gi|18308988|ref|NP_560922.1| DNA gyrase subunit B [Clostridium perfringens str. 13]
gi|18143663|dbj|BAB79712.1| DNA gyrase subunit B [Clostridium perfringens str. 13]
Length = 638
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 447/647 (69%), Gaps = 30/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V
Sbjct: 6 NQNYDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVY 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS+ P+ +HP K +E ++TVLHAGGKFGG S LHGVG
Sbjct: 66 IHKDNSVTVVDDGRGMPVGIHPKMGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EV V RDG + Q Y RG +T L + + GT++ F PD ++F
Sbjct: 124 SVVNALSELCEVIVTRDGYVWKQSYKRGAVLTGLE----RIGEAEGSGTKVHFKPDHEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++D ++ R+RELAFLN + I L E D K + Y + GG++ +V +LN +
Sbjct: 180 EET-EYDFEILSQRLRELAFLNKGINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRN 236
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+ LHD V G + DGI ++++LQ+ D +++ + +AN+I T++GGTH+ G K +
Sbjct: 237 KEVLHDEPIYVEGLK---DGIAVEVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTA 292
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N G++ +K+ D +LSG+ +REGLT ++SV++ +P+FEGQTKT+LGN EVR
Sbjct: 293 LTRVMNDYGRRFGHLKESDKNLSGDDIREGLTAVVSVKISDPQFEGQTKTKLGNSEVRSA 352
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD E ++ +LE +P+V I+ K+L A +A AA+RAR+L R KSVL SSLPGKLA
Sbjct: 353 VDSISGEGISTFLEENPEVGKIIIEKALLASRAREAARRARELTR-KSVLERSSLPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P+E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + ++ I+
Sbjct: 412 DCSSKDPKECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIR 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+++ A+G G+ G +F E +RY++III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y
Sbjct: 472 SMVTAIGAGI-GPEFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVY 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYK+ +GKQ +Y Y DA ++ F ++ ++QR+KGLGEM QLWETT++
Sbjct: 531 IAQPPLYKISKGKQERYAYSDAAADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMD 590
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R+L + IEDA A+ +F+ LMG +V+ R+E IQ NA N+ NLD
Sbjct: 591 PESRILLRADIEDAMVADEIFTILMGDKVEPRREFIQKNAKNVSNLD 637
>gi|340351772|ref|ZP_08674674.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
gi|339616843|gb|EGQ21482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
Length = 656
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/653 (48%), Positives = 430/653 (65%), Gaps = 32/653 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINE 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSVTVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS ++ V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 129 NALSSHMKSQVFRNGKIYQQEYEQGKPLYPVKV----VGETDKTGTRQQFWPDGSIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKK 306
+ F +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 185 V-FQWEIVARRMRELAFLNAGIKITLTDLRPNSEGKTRQEVFHAKEGLKEFVRYVDRHRT 243
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YNENIHSYVNNINTIEGGTHLTGFRTALTRTL 302
Query: 366 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADNDPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALSYYLEENPVEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLAD 422
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N
Sbjct: 423 CSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMN 482
Query: 542 LIRALGL--GVKGE-DFK--KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+++G+ GV+GE DF+ + LRY KIII+TDADVDG+HI TL++T FYRY + +E
Sbjct: 483 IIQSIGVRFGVEGESDFEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEE 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLYK K +YCY + + L K N QR+KGLGEM P Q
Sbjct: 543 GHLYIATPPLYKCTYKKVSEYCYTEQQRLQFLNKYAGGDEENKAVHTQRYKGLGEMNPEQ 602
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LWETT++P+ R+LKQ+ IE+A+ A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 603 LWETTMDPKTRLLKQVTIENASTADEMFSMLMGDDVEPRREFIEQNATYANID 655
>gi|332881729|ref|ZP_08449377.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357044627|ref|ZP_09106276.1| DNA gyrase, B subunit [Paraprevotella clara YIT 11840]
gi|332680368|gb|EGJ53317.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355532434|gb|EHH01818.1| DNA gyrase, B subunit [Paraprevotella clara YIT 11840]
Length = 655
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/656 (47%), Positives = 431/656 (65%), Gaps = 37/656 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE +DN++DEA AGY ++IEV +
Sbjct: 10 NYSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDNGRGIPVDMHEKEHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+R+G Y Q+Y GKP+ + V + +GTR +FWPD +F T
Sbjct: 128 VNALSTHMLSQVFREGKIYQQEYECGKPLYPVKV----VGETELRGTRQQFWPDGSIFIT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
+ + +A R+RELAFLN +TI L + E+ P ++ GL+E+V+++
Sbjct: 184 TT-YKYEILANRMRELAFLNAGITITLTDMREKDENGVPRSETFHS---KDGLKEFVRYI 239
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
++ + L +DV+ + G+ I++A+ + ++ Y++ + Y N+I TI+GGTH+ G + +
Sbjct: 240 DSSRIHLFNDVIYLNTEKQGVPIEVAIMY-NNGYTENIHSYVNNINTIEGGTHLAGFRTA 298
Query: 361 LTRTL-----NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
LTRTL + K+ + ++ + +SGE REGLT +IS++V P+FEGQTKT+LGN
Sbjct: 299 LTRTLKKYAEDEYAKELEKLEKNKVEISGEDFREGLTAVISIKVAEPQFEGQTKTKLGNS 358
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
EV V Q+V E L+ YLE HP I+ K + A A +AA++AR+ V++KS + +
Sbjct: 359 EVAGAVQQAVGEALSYYLEEHPKEAKLIVDKVILAATARVAARKARESVQRKSPMSGGGM 418
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKLADCS E+FIVEGDSAGGSAKQGR R++QAILP+RGKI NVER ++
Sbjct: 419 PGKLADCSDKDAANCELFIVEGDSAGGSAKQGRSRQYQAILPIRGKIFNVERVMWHKAFE 478
Query: 536 NEEIQNLIRALGLGVK-GEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
+EE+ N+I+ALG+ GED K+ E LRY+K+II+TDADVDG+HI TLL+T FYRY
Sbjct: 479 HEEVNNIIQALGVRFGLGEDSKEANYEKLRYYKVIIMTDADVDGSHIDTLLMTLFYRYMP 538
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP--SNALYSIQRFKGLGEMM 649
L +G +Y+ PPLY+ ++GK +YCY +A+ + + S + QR+KGLGEM
Sbjct: 539 ELIQKGHLYIATPPLYRCKKGKIEEYCYTEADRLRFMQQYNNGSEQGMTTQRYKGLGEMN 598
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT+NPE R+LKQ+ IEDAA A+ VFS LMG V R+E I+ A N+D
Sbjct: 599 PEQLWETTMNPETRLLKQVTIEDAAGADYVFSMLMGEDVGPRREFIEQNATYANID 654
>gi|448624637|ref|ZP_21670585.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
gi|445749842|gb|EMA01284.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
Length = 639
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/635 (50%), Positives = 430/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV+L
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVSLHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEFGEPQVDEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISLADERTD----ESSSFRFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTALPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|110598305|ref|ZP_01386580.1| DNA gyrase, B subunit [Chlorobium ferrooxidans DSM 13031]
gi|110340113|gb|EAT58613.1| DNA gyrase, B subunit [Chlorobium ferrooxidans DSM 13031]
Length = 649
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/645 (49%), Positives = 429/645 (66%), Gaps = 35/645 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TYG+ IQVL+G+E VR RPAMYIG RGLHHLVYEI+DN++DE G+ I VAL
Sbjct: 17 TYGANNIQVLDGIEHVRMRPAMYIGDIHSRGLHHLVYEIVDNSIDETLGGFNDYIFVALN 76
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+ S IP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SV
Sbjct: 77 PEGSVTVIDRGRGIPVDIHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASV 134
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE EV V+RDG Y Q++ RG P V + D++GT+ F PD Q+F T
Sbjct: 135 VNALSEWCEVEVYRDGNVYFQRFERGIP----QGDVRVIGKTDKKGTKTTFMPDHQIFKT 190
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----L 301
+F + I R+RELAFLN +L+I ++ + E + + GG++E+VQ+ +
Sbjct: 191 T-EFRKDIIIDRMRELAFLNKELSITVQDTEGIDEI-----FHYVGGIKEFVQFTDQNRI 244
Query: 302 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
N K+P++ + G R D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +L
Sbjct: 245 NLLKEPIY-LYGER---DSTIVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKAL 299
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TRTLN+ +K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V
Sbjct: 300 TRTLNAYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIV 359
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V E L E+ E +P+VL I+ K A + AA++A++L R+KSVL SS LPGKLAD
Sbjct: 360 ETIVNEQLAEFAESNPNVLKMIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLAD 419
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+
Sbjct: 420 CSINDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKT 479
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I ALG E+F E LRY KIII+TDADVDGAHIRTLLLTFF+R+ ++L + G +++
Sbjct: 480 IILALGTSFGEEEFSTEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRHMRSLIEAGRVFI 539
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETT 657
PPLY V+ GK+ QY +DD E + S A IQR+KGLGEM P QLW TT
Sbjct: 540 AQPPLYLVKSGKEQQYAWDDDERNSITESMKKMQKGKANIHIQRYKGLGEMNPEQLWSTT 599
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
++P R L + +E+A EA+ VFS+LMG +V+ R+E I+ A V
Sbjct: 600 MDPAHRSLLLVNVENAMEADQVFSTLMGDKVEPRREFIEKNARYV 644
>gi|448562398|ref|ZP_21635356.1| DNA gyrase subunit B [Haloferax prahovense DSM 18310]
gi|445718716|gb|ELZ70400.1| DNA gyrase subunit B [Haloferax prahovense DSM 18310]
Length = 639
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/635 (50%), Positives = 428/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSGKLEVEVKRDGAVWTHRFEFGEPQVDEFERVRDLEPDEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----GDERTGESSTFLFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISIKPPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTTTAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPAESELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|445061818|ref|ZP_21374304.1| DNA gyrase subunit B [Brachyspira hampsonii 30599]
gi|444506805|gb|ELV07081.1| DNA gyrase subunit B [Brachyspira hampsonii 30599]
Length = 636
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/643 (49%), Positives = 422/643 (65%), Gaps = 24/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DN IP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 EKDNIIKVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS L V +DG Y Q Y RG P V V + + GT + F D +F
Sbjct: 123 VVNALSTELIAEVNKDGKLYRQVYHRGVPEEP----VKEVGTSTKTGTTVTFKADADIFE 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T I +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTI-YDYKILANRLRELAFLNRGIRITL--TDKREAEVVSNEFYYEGGIEMFITHLNENK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
K LHD + K D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KALHDKPIYLHKTEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
++ E+++VEGDSAGG+AK GRDR FQAILPLRGK+LNVE+ + NE ++ +I
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIA 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG GV G F +RY ++II+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VP
Sbjct: 475 ALGCGV-GSSFDISKIRYGRVIIMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVP 533
Query: 605 PLYKVERGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYK+ K+ Y Y D + K+ S + Y IQR+KGLGEM QLWETT+NPE R
Sbjct: 534 PLYKISFDKKNFVYAYSDEQRDKILSE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETR 592
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
++ Q++ EDA +A+ +FS LMG V R++ I++ A V NLD
Sbjct: 593 LMYQVLTEDAEKADQLFSMLMGDEVKPRRDFIESNARYVKNLD 635
>gi|110799437|ref|YP_694481.1| DNA gyrase subunit B [Clostridium perfringens ATCC 13124]
gi|168207731|ref|ZP_02633736.1| DNA gyrase, B subunit [Clostridium perfringens E str. JGS1987]
gi|168215272|ref|ZP_02640897.1| DNA gyrase, B subunit [Clostridium perfringens CPE str. F4969]
gi|170764021|ref|ZP_02637634.2| DNA gyrase, B subunit [Clostridium perfringens B str. ATCC 3626]
gi|182420561|ref|ZP_02643926.2| DNA gyrase, B subunit [Clostridium perfringens NCTC 8239]
gi|182627057|ref|ZP_02954782.1| DNA gyrase, B subunit [Clostridium perfringens D str. JGS1721]
gi|422347733|ref|ZP_16428644.1| DNA gyrase subunit B [Clostridium perfringens WAL-14572]
gi|110674084|gb|ABG83071.1| DNA gyrase, B subunit [Clostridium perfringens ATCC 13124]
gi|170660917|gb|EDT13600.1| DNA gyrase, B subunit [Clostridium perfringens E str. JGS1987]
gi|170710064|gb|EDT22246.1| DNA gyrase, B subunit [Clostridium perfringens B str. ATCC 3626]
gi|170713332|gb|EDT25514.1| DNA gyrase, B subunit [Clostridium perfringens CPE str. F4969]
gi|177907583|gb|EDT70222.1| DNA gyrase, B subunit [Clostridium perfringens D str. JGS1721]
gi|182379692|gb|EDT77171.1| DNA gyrase, B subunit [Clostridium perfringens NCTC 8239]
gi|373223711|gb|EHP46058.1| DNA gyrase subunit B [Clostridium perfringens WAL-14572]
Length = 638
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 446/647 (68%), Gaps = 30/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V
Sbjct: 6 NQNYDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVY 65
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS+ P+ +HP K +E ++TVLHAGGKFGG S LHGVG
Sbjct: 66 IHKDNSVTVVDDGRGMPVGIHPKMGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 123
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EV V RDG + Q Y RG +T L + + GT++ F PD ++F
Sbjct: 124 SVVNALSELCEVIVTRDGYVWKQSYKRGAVLTGLE----KIGEAEGSGTKVHFKPDHEIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++D ++ R+RELAFLN + I L E D K + Y + GG++ +V +LN +
Sbjct: 180 EET-EYDFEILSQRLRELAFLNKGINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRN 236
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+ LHD V G + DGI ++++LQ+ D +++ + +AN+I T++GGTH+ G K +
Sbjct: 237 KEVLHDEPIYVEGLK---DGIAVEVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTA 292
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N G++ +K+ D +LSG+ +REGLT ++SV++ P+FEGQTKT+LGN EVR
Sbjct: 293 LTRVMNDYGRRFGHLKESDKNLSGDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRSA 352
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD E ++ +LE +P+V I+ K+L A +A AA+RAR+L R KSVL SSLPGKLA
Sbjct: 353 VDSISGEGISTFLEENPEVGKIIIEKALLASRAREAARRARELTR-KSVLERSSLPGKLA 411
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P+E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + ++ I+
Sbjct: 412 DCSSKDPKECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIR 471
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+++ A+G G+ G +F E +RY++III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y
Sbjct: 472 SMVTAIGAGI-GPEFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVY 530
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYK+ +GKQ +Y Y DA ++ F ++ ++QR+KGLGEM QLWETT++
Sbjct: 531 IAQPPLYKISKGKQERYAYSDAAADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMD 590
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R+L + IEDA A+ +F+ LMG +V+ R+E IQ NA N+ NLD
Sbjct: 591 PESRILLRADIEDAMVADEIFTILMGDKVEPRREFIQKNAKNVSNLD 637
>gi|374812884|ref|ZP_09716621.1| DNA gyrase subunit B [Treponema primitia ZAS-1]
Length = 642
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/653 (49%), Positives = 432/653 (66%), Gaps = 32/653 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA-------G 125
+S TY ++ IQVL+GLEAVRKRP MYIG+TG GLHHLV+E++DN++DEA A G
Sbjct: 1 MSSTYSAQNIQVLKGLEAVRKRPGMYIGTTGIDGLHHLVFEVVDNSIDEAMAINPETGKG 60
Query: 126 YASNIEVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
+ +I V L + DN IP+D+HP SALE V+T LHAGGKF +S Y VS
Sbjct: 61 FCDDILVVLEGNDVVRVEDNGRGIPVDIHPGEGVSALELVMTRLHAGGKFDKNS--YKVS 118
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVG+SVVNALSE E V DG + Q+Y G P + DR+GT +R
Sbjct: 119 GGLHGVGVSVVNALSEWCEAFVHIDGKIHTQRYQIGVP----DAPTHEAGTTDRRGTVVR 174
Query: 237 FWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F D +F TT FD ++ R+RELAFLN L I +R E K+ E+ F GG++
Sbjct: 175 FKADTSIFETTTYNFD--ALSNRLRELAFLNKGLKITIRDERLSTPKDH--EFKFDGGVK 230
Query: 296 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
+V +LN +K L+ + + DG+ ++ A+Q+ +D Y++ M + N I T +GGTH+
Sbjct: 231 SFVDYLNENKNVLYREPIFIEGSRDGVEVECAIQY-NDGYNEIMFSFVNDINTREGGTHL 289
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G K++LTRTLN KKSK K + SLSG+ VREGLT ++S +VPNP+FEGQTK +LGN
Sbjct: 290 VGFKSALTRTLNEYLKKSKHAKKLEESLSGDDVREGLTAVLSTKVPNPQFEGQTKGKLGN 349
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV+ +V+ V E L YL+ HPDV+ +IL KS+ A KA +AA++ARD R+K+ + S+
Sbjct: 350 SEVKGIVESLVNEQLELYLDQHPDVIGNILEKSILAAKARIAARQARDATRRKNAMDSAG 409
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCS P E+FIVEGDSAGGSAK GR+R+FQAIL L GK+LNVE+ +
Sbjct: 410 LPGKLADCSEKDPSLCELFIVEGDSAGGSAKMGRNRQFQAILSLFGKMLNVEKTRIEKVV 469
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NE++Q +I ++G G G +F +RYHKI+I+ DADVDG+HIRTLLLTFFYRY L
Sbjct: 470 TNEKLQPIIASIGAGC-GVEFDIAKIRYHKIVIMADADVDGSHIRTLLLTFFYRYMTALI 528
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQL 653
+ G +Y+ +PPLYKV K+ Y YDD E + + S +IQR+KGLGEM P QL
Sbjct: 529 ERGHVYLAMPPLYKVNYEKKTFYAYDDEEKDRLLAESGRDPEKVAIQRYKGLGEMNPDQL 588
Query: 654 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
W+TT++P QR + Q+ ++DA EA +F++LMG V R+E I+ A LV NLD
Sbjct: 589 WDTTMDPAQRNIIQIHLDDAVEAERIFTTLMGEVVQPRREFIEENALLVANLD 641
>gi|448585462|ref|ZP_21647855.1| DNA gyrase subunit B [Haloferax gibbonsii ATCC 33959]
gi|445726162|gb|ELZ77779.1| DNA gyrase subunit B [Haloferax gibbonsii ATCC 33959]
Length = 639
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/635 (50%), Positives = 428/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEFGEPQVDQFERVRDLEPDEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----GDERTGESSTFLFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P +SE+F+VEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPSKSELFVVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|78188013|ref|YP_378351.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
gi|78170212|gb|ABB27308.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
Length = 637
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/644 (49%), Positives = 426/644 (66%), Gaps = 35/644 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ IQVL+G+E VR RPAMYIG RGLHHLVYEI+DN++DE G+ I VAL A
Sbjct: 6 YGATNIQVLDGIEHVRMRPAMYIGDIHSRGLHHLVYEIVDNSIDETLGGFNDYIFVALNA 65
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SVV
Sbjct: 66 DGSITVIDHGRGIPVDMHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVV 123
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE EV V+RDG Y+Q+Y RG P V + D++GT+ F PD +F T
Sbjct: 124 NALSEWCEVEVYRDGKAYYQRYERGVP----QGDVKVIGDSDQRGTKTTFMPDGTIFKTT 179
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----LN 302
+F I R+RELAFLN L I ++ + + E E+ F GG+ E+V++ LN
Sbjct: 180 -EFRKEIIIDRMRELAFLNKNLRIIVQDTNGEQE-----EFHFEGGICEFVRFTDQNRLN 233
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
++P++ + G R DG +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LT
Sbjct: 234 LLREPIY-LYGER---DGTVVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALT 288
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLNS +K+ +K+ ++L+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+
Sbjct: 289 RTLNSYAQKNDLLKNLKLTLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVE 348
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V + L E+ E +P+ L I+ K A + AA++A++L R+KSVL SS LPGKLADC
Sbjct: 349 TVVNDQLAEFAESNPNTLKLIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADC 408
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +
Sbjct: 409 SINDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTI 468
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG E+F E LRY KIII+TDADVDGAHIRTLLLTFF+R+ + + + G +Y+
Sbjct: 469 ILALGTSFGDEEFAVEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRHMRPVIEAGRVYIA 528
Query: 603 VPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
PPLY V+ GK Y +DD E + +K S A IQR+KGLGEM P QLW TT+
Sbjct: 529 QPPLYLVKSGKDQHYAWDDDERNSIVDNMKKMQKSKANIHIQRYKGLGEMNPEQLWSTTM 588
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
+P R L + +E+A EA+ VFS+LMG +V+ R+E I+ A V
Sbjct: 589 DPAHRSLLLVSVENAMEADQVFSTLMGDKVEPRREFIEKNARYV 632
>gi|282878003|ref|ZP_06286811.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
gi|281299838|gb|EFA92199.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
Length = 657
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/655 (48%), Positives = 433/655 (66%), Gaps = 35/655 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTIND 70
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D SI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DESITVQDNGRGIPVDQHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS + V+RDG Y Q+Y RGK + + + + +GTR +FWPD +FTT
Sbjct: 129 NALSSHMTSQVFRDGKIYQQEYERGKALYPVKV----IGETNLRGTRQQFWPDGSIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 306
F + IA R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 185 -HFQWDIIARRMRELAFLNAGIRITLTDLRPNEEGKTRTEVFHAKDGLKEFVRYVDRHRT 243
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 366 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+ SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KTYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E LT YLE HP I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALTNYLEEHPTEAKQICEKVVLAATARIAARKARESVQRKNVMSGGGLPGKLAD 422
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N
Sbjct: 423 CSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMN 482
Query: 542 LIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+++G+ GV GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + +E
Sbjct: 483 IIQSIGVRFGVDGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKIIEE 542
Query: 597 GCIYVGVPPLYKVE-RGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMP 650
G +Y+ PPLYK + K +YCY + + K + S ++++ QR+KGLGEM P
Sbjct: 543 GHLYIATPPLYKCTYKNKASEYCYTEQQRQAFIDKYAQGEEDSKSIHT-QRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|110637817|ref|YP_678024.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406]
gi|110280498|gb|ABG58684.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406]
Length = 652
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/653 (47%), Positives = 439/653 (67%), Gaps = 37/653 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQVLEGLEAVRKRPAMYIG G +GLHHLV+E++DN++DEA AG+ ++I V +
Sbjct: 12 YSADSIQVLEGLEAVRKRPAMYIGDIGIKGLHHLVWEVVDNSIDEALAGHCTDITVEINE 71
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+NSI P + KSALE VLTVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 72 NNSITVTDNGRGIPTGVIAKYGKSALEVVLTVLHAGGKFDKDS--YKVSGGLHGVGVSCV 129
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS ++VTV+ G + Q+Y +G P V + D GT+++F PD +FT++
Sbjct: 130 NALSTDMKVTVYSHGKVHQQEYKKGIP----QYDVKEIGESDLHGTKVQFLPDDTIFTSS 185
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDS-DPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
++ + TIA R+REL+FLN + I L+ D E E F + GGL E+V +L++ +
Sbjct: 186 -EYKYETIANRLRELSFLNKGIRITLQDHRQVDAEGKSEIEMFHSEGGLREFVDYLDSTR 244
Query: 306 K-----PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
+ PL+ D I +++A+ + + +YS+ + Y N+I TI+GGTH+ G + +
Sbjct: 245 EKLIPTPLY----MESDKGPIPVEVAMLYNT-SYSENVFSYVNNINTIEGGTHVAGFRRA 299
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTRTL S KS ++ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN +V
Sbjct: 300 LTRTLKSYADKSGMLEKLKMEVTGDDFREGLTAVISVKVQEPQFEGQTKTKLGNSDVMGA 359
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VDQ V E L YLE +P I+ K + A +A AA++AR++V++K+VL S LPGKLA
Sbjct: 360 VDQVVGEMLNTYLEENPKEAKIIVQKVILAAQARNAARKAREMVQRKNVLSGSGLPGKLA 419
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS + PE+ E+++VEGDSAGGSAKQGRDR++ AILPLRGKILNVE+ E +Y+N+EI+
Sbjct: 420 DCSESDPEKCELYLVEGDSAGGSAKQGRDRKYHAILPLRGKILNVEKAQEHRIYENDEIK 479
Query: 541 NLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
N+I ALG+ E+ +K LRYHK+II+TDAD+DG+HIRTL+LTFF+RY + L D
Sbjct: 480 NMITALGVSFGTEEGEKVLNLTKLRYHKVIIMTDADIDGSHIRTLILTFFFRYMRALIDG 539
Query: 597 GCIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
G +Y+ PPLY V+RGK+ +YC+ +A +K++ +++ IQR+KGLGEM P Q
Sbjct: 540 GHVYIAQPPLYLVKRGKEEKYCWTEEQREAAVKELAKDGKEDSV-GIQRYKGLGEMNPEQ 598
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
LW TT++PE+R LKQ+ +E AAEA+ +FS LMG V R++ I+ A +D
Sbjct: 599 LWSTTMDPEKRSLKQVSVESAAEADHLFSMLMGDEVAPRRDFIEKNARYAKID 651
>gi|169343479|ref|ZP_02864479.1| DNA gyrase, B subunit [Clostridium perfringens C str. JGS1495]
gi|422872596|ref|ZP_16919081.1| DNA gyrase subunit B [Clostridium perfringens F262]
gi|169298431|gb|EDS80520.1| DNA gyrase, B subunit [Clostridium perfringens C str. JGS1495]
gi|380306482|gb|EIA18746.1| DNA gyrase subunit B [Clostridium perfringens F262]
Length = 637
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 446/647 (68%), Gaps = 30/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V
Sbjct: 5 NQNYDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVY 64
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNS+ P+ +HP K +E ++TVLHAGGKFGG S LHGVG
Sbjct: 65 IHKDNSVTVVDDGRGMPVGIHPKMGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 122
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE EV V RDG + Q Y RG +T L + + GT++ F PD ++F
Sbjct: 123 SVVNALSELCEVIVTRDGYVWKQSYKRGAVLTGLE----KIGEAEGSGTKVHFKPDHEIF 178
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++D ++ R+RELAFLN + I L E D K + Y + GG++ +V +LN +
Sbjct: 179 EET-EYDFEILSQRLRELAFLNKGINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRN 235
Query: 305 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
K+ LHD V G + DGI ++++LQ+ D +++ + +AN+I T++GGTH+ G K +
Sbjct: 236 KEVLHDEPIYVEGLK---DGIAVEVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTA 291
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N G++ +K+ D +LSG+ +REGLT ++SV++ P+FEGQTKT+LGN EVR
Sbjct: 292 LTRVMNDYGRRFGHLKESDKNLSGDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRSA 351
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD E ++ +LE +P+V I+ K+L A +A AA+RAR+L R KSVL SSLPGKLA
Sbjct: 352 VDSISGEGISTFLEENPEVGKIIIEKALLASRAREAARRARELTR-KSVLERSSLPGKLA 410
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCSS P+E EI+IVEGDSAGGSAKQGRDR+FQAILPLRGKI+NVE++ + ++ I+
Sbjct: 411 DCSSKDPKECEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIR 470
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+++ A+G G+ G +F E +RY++III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y
Sbjct: 471 SMVTAIGAGI-GPEFDIEKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVY 529
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLN 659
+ PPLYK+ +GKQ +Y Y DA ++ F ++ ++QR+KGLGEM QLWETT++
Sbjct: 530 IAQPPLYKISKGKQERYAYSDAAADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMD 589
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
PE R+L + IEDA A+ +F+ LMG +V+ R+E IQ NA N+ NLD
Sbjct: 590 PESRILLRADIEDAMVADEIFTILMGDKVEPRREFIQKNAKNVSNLD 636
>gi|452951124|gb|EME56574.1| DNA gyrase subunit B [Amycolatopsis decaplanina DSM 44594]
Length = 655
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/659 (47%), Positives = 435/659 (66%), Gaps = 42/659 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AG+A+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGFATKVEVTLLA 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D IP+D+HP K LE VLTVLHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDMHPKEQKPTLEVVLTVLHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L V R G + Q Y+ P + + + GT I FW D +F T
Sbjct: 126 NALSTKLIAEVKRGGHSWRQVYTDQVP-----GELEDLGPAEDTGTTITFWADGDIFETT 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE---DSDPEKNQYNE--------YFFAGGLEE 296
++ TI+ R++E+AFLN LT++LR E D + E + + Y + GGLE+
Sbjct: 181 T-YNFETISRRLQEMAFLNKGLTLSLRDERVADEETEADASGQAARVKEKTYCYPGGLED 239
Query: 297 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V+ +N K P+H V+ F G+ +++A+QW ++ ++ ++ +AN+I T +GGTH E
Sbjct: 240 FVKHINGSKDPIHASVISFEAKGTGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEE 298
Query: 356 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 415
G +A+LTR +N+ ++ K +K+KD +LSG+ VREGL I+S+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNAYAREKKLLKEKDANLSGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNS 358
Query: 416 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 475
E + V Q+ E+L ++ E +P +I++KS+S+ +A +AA++ARDLVR+K L L
Sbjct: 359 EAKTFVQQTSNEWLADWFERNPTEAKTIINKSISSAQARMAARKARDLVRRKGALEIGGL 418
Query: 476 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 535
PGKL DC ST P E E++IVEGDSAGGSAK+GRD +QAILP+RGKI+NVE+ + K
Sbjct: 419 PGKLKDCRSTNPSECELYIVEGDSAGGSAKEGRDSMYQAILPIRGKIINVEKARIDRVLK 478
Query: 536 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N E+Q+LI ALG G+ E+F E LRYHKI+++ DADVDG HI TLLLTF +R+ L +
Sbjct: 479 NTEVQSLITALGTGIH-EEFDIEKLRYHKIVLMADADVDGQHITTLLLTFLFRFMPPLIE 537
Query: 596 EGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSS-------FPSNALYSIQRFKGLGE 647
G +++ PPLYK++ +Q +Y Y D E V + P + +IQR+KGLGE
Sbjct: 538 HGHVFLSRPPLYKIKWPRQDPEYAYSDRERDAVIQAGVEAGRKLPKDD--AIQRYKGLGE 595
Query: 648 MMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
M +LWETT++P R+L Q+ ++DAA+A+ +FS LMG V+ R+ I +NA ++ LD
Sbjct: 596 MNAEELWETTMDPANRLLGQVTLDDAAQADDLFSVLMGEDVEARRSFITRNAKDVRFLD 654
>gi|282880626|ref|ZP_06289332.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
gi|281305521|gb|EFA97575.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
Length = 657
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/664 (47%), Positives = 434/664 (65%), Gaps = 34/664 (5%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A K+N Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 2 AEKQN-TENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGY 60
Query: 127 ASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 177
++IEV + D SI P+D H +KSALE V+TVLHAGGKF S Y VSG
Sbjct: 61 CTDIEVTINEDESITVQDNGRGIPVDQHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSG 118
Query: 178 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 237
GLHGVG+S VNALS + V+RDG Y Q+Y +GK + + V D++GTR +F
Sbjct: 119 GLHGVGVSCVNALSSHMTSQVFRDGKIYQQEYEKGKALYPVKV----VGETDKRGTRQQF 174
Query: 238 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEE 296
WPD +FTT F + IA R+RELAFLN + I L + E E F A GL+E
Sbjct: 175 WPDGSIFTTT-HFQWDIIARRMRELAFLNAGIRITLTDLRPNEEGKTRTEVFHAKDGLKE 233
Query: 297 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 355
+V++++ + L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+
Sbjct: 234 FVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLT 292
Query: 356 GVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
G +A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+
Sbjct: 293 GFRAALTRTLKTYADSEPTISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTK 352
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN EV V Q+V E L+ YLE HP I K + A A +AA++AR+ V++K+ +
Sbjct: 353 LGNSEVSGAVQQAVGEALSNYLEEHPTEAKQICEKVVLAATARIAARKARESVQRKNFMS 412
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+
Sbjct: 413 GGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWH 472
Query: 532 AMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFF 586
+++ E + N+I+++G+ GV+GE ++ + LRY KIII+TDADVDG+HI TL++T F
Sbjct: 473 RVFEAESVMNIIQSIGVRFGVEGEADREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLF 532
Query: 587 YRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALYSIQR 641
YR+ + +EG +Y+ PPLYK + K +YCY + + + K + + QR
Sbjct: 533 YRFMPKVIEEGHLYIATPPLYKCSYKNKASEYCYTEQQRQAFIDKYANGEEDSKSIHTQR 592
Query: 642 FKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANL 701
+KGLGEM P QLWETT+NP+ R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A
Sbjct: 593 YKGLGEMNPEQLWETTMNPKTRLLKQVTIENAADADEIFSMLMGDDVEPRREFIEKNATY 652
Query: 702 VNLD 705
N+D
Sbjct: 653 ANID 656
>gi|190710587|gb|ACE95124.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/635 (50%), Positives = 429/635 (67%), Gaps = 25/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 4 YDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEE 63
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ + + A+E ++TVLHAGGKFGG S LH V SVV
Sbjct: 64 DNSIRVTDNGRGIPVGIQKKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHDVVASVV 121
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 122 NALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQET 177
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN K
Sbjct: 178 TVYDFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSK 232
Query: 306 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 233 QPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRV 291
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 292 INDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESV 351
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 352 FSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSS 411
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 412 KDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIIT 471
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ P
Sbjct: 472 AIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGNIYIAQP 530
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 531 PLFKIQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRS 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 591 LLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|259047900|ref|ZP_05738301.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175]
gi|259035577|gb|EEW36832.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175]
Length = 645
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 311/647 (48%), Positives = 426/647 (65%), Gaps = 20/647 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A++IE+
Sbjct: 9 LAAQYDASQIQVLEGLEAVRKRPGMYIGSTSSAGLHHLVWEIVDNSIDEALAGFATHIEI 68
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ +N IP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 69 EITKENHIRVTDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 126
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS L V V++DG Y Q Y RG + L + + D+ GT + F PD ++
Sbjct: 127 ASVVNALSTDLTVQVFKDGNIYEQSYKRGAVLEDLKI----IGTTDKHGTSVYFVPDPEI 182
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F F+ + +A R+RELAFLN L + + D PE+ + + GG++ YV+ LN
Sbjct: 183 FQETTVFEFDKLANRVRELAFLNKGLKLTIT--DFRPEEPVRKSFCYEGGIKSYVEHLNK 240
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K+ L + + + DGI +++A+Q+ S Y +L + N+I T +GGTH G+K +LT
Sbjct: 241 SKQVLFEEPIYVEGEQDGIQVEVAMQYTS-GYHTNLLSFTNNIHTYEGGTHESGMKTALT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N ++ K +K+ + LSGE VREGLT ++S++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 RVINDYARRQKLMKENEEKLSGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEARTITD 359
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ + ++L +P V I+ K + A KA LAAKRAR++ R+KS L S+LPGKLADC
Sbjct: 360 RLFSTHFDKFLMENPQVARKIVEKGILASKARLAAKRAREVTRKKSGLEISNLPGKLADC 419
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
SS P SE+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 420 SSNDPTISELFIVEGDSAGGSAKQGRSRHFQAILPIRGKILNVEKATLDKILANEEIRSL 479
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
A+G G G DF RY K++I+TDADVDG+HIRTLL+T FYRY + + G IY+
Sbjct: 480 FTAMGTGFGG-DFDLSKARYQKLVIMTDADVDGSHIRTLLITLFYRYMRPAVEAGYIYIA 538
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+++GK Y +D EL+ P++ + R+KGLGEM QLWETT+NPE
Sbjct: 539 QPPLYKLKQGKNEYYIQNDKELEAKLKELPAHPKPQLSRYKGLGEMDAEQLWETTMNPEN 598
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
R + Q+ +EDAAEA+ + LMG RV+ R+E I++ A +N++ LDI
Sbjct: 599 RSMLQVSVEDAAEADQILDILMGDRVEPRREFIESNAKYINMEDLDI 645
>gi|441497053|ref|ZP_20979274.1| DNA gyrase subunit B [Fulvivirga imtechensis AK7]
gi|441439184|gb|ELR72507.1| DNA gyrase subunit B [Fulvivirga imtechensis AK7]
Length = 651
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/650 (47%), Positives = 430/650 (66%), Gaps = 27/650 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + IQVLEGLEAVRKRPAMYIG G +GLHHL++E++DN++DEA AGY + I V +
Sbjct: 9 KEYSAGNIQVLEGLEAVRKRPAMYIGDVGVKGLHHLIWEVVDNSIDEALAGYCNEISVTI 68
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+NSI P D+H +SALE V+TVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 69 NENNSITVSDNGRGIPTDIHTKEKRSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VNALS L V R+G Y Q+Y G P + V + D+ GT I F PD +F
Sbjct: 127 CVNALSTDLRAEVHRNGKIYEQEYKIGVPQYS----VREIGDTDKTGTTITFQPDSSIFN 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE--KNQYNEYFFAGGLEEYVQWLN- 302
++ + T+A R+RELA+LN + I L+ + K + +++F GGL+E+VQ+L+
Sbjct: 183 VT-EYTYETVASRLRELAYLNAGIRIHLKDLRDLDDDGKPKSDDFFSEGGLKEFVQYLDS 241
Query: 303 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
T +K + + + + + +A+ + + +YS+ ++ Y N+I TI+GGTH+ G + +LT
Sbjct: 242 TREKLIPEPIYMDSEKGENPVQVAMSYNT-SYSENVVSYVNNINTIEGGTHVAGFRRALT 300
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTL + KS + + +SG+ REGLT +ISV+V P+FEGQTKT+LGN +V VD
Sbjct: 301 RTLKAYADKSGLLDKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSDVSGSVD 360
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L YLE +P SI+ K + A +A AA++AR++V++K+VL + LPGKLADC
Sbjct: 361 TVVGEMLNNYLEENPKEAKSIVQKVIIAAQARHAARKAREMVQRKNVLSGTGLPGKLADC 420
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ P SE+++VEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ E +Y+NEEI+N+
Sbjct: 421 SNNDPTISELYLVEGDSAGGSAKQGRDRNFQAILPLRGKILNVEKAQEHKIYENEEIKNM 480
Query: 543 IRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I ALG+ E+ +K LRYHKIII+TDADVDG+HIRTL+LTFF+RY L ++G
Sbjct: 481 ITALGVSFGTEEDEKALNMTKLRYHKIIIMTDADVDGSHIRTLILTFFFRYMHALIEKGY 540
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL---YSIQRFKGLGEMMPVQLWE 655
+Y+ +PPLY+++RG+ +YC+ + E K+ +QR+KGLGEM P QLW
Sbjct: 541 VYIALPPLYQLKRGRDERYCWTEEERMKLIKEMAGEGKEESVGVQRYKGLGEMNPEQLWT 600
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT++PE R LK++ IE AAEA+ +FS LMG V R+E I+ A +D
Sbjct: 601 TTMDPENRSLKRVTIESAAEADHLFSMLMGDEVAPRREFIERNAKYAKVD 650
>gi|281421058|ref|ZP_06252057.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
gi|281404976|gb|EFB35656.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
Length = 656
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/649 (48%), Positives = 432/649 (66%), Gaps = 34/649 (5%)
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSI- 140
IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV + DNSI
Sbjct: 16 IQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTINEDNSIT 75
Query: 141 --------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 192
P+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS
Sbjct: 76 VEDNGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALST 133
Query: 193 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDH 252
+ V+R G Y Q+Y +GKP+ + V +++GTR +FWPD +FT + +
Sbjct: 134 HMLSQVFRGGKIYQQEYEKGKPLYPVKV----VGETNKRGTRQQFWPDPTIFTHTV-YKW 188
Query: 253 NTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HD 310
+ IA R+RELAFLN + I LR D E + F A GL+E+V++++ + L D
Sbjct: 189 DIIANRMRELAFLNAGIKITLRDLRPDEEGKTKEQVFHAKDGLKEFVRYVDRHRTHLFDD 248
Query: 311 VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGK 370
V+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRTL + +
Sbjct: 249 VIYLKTEKQGIPIEIAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRTLKAYAE 307
Query: 371 K----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
SK ++ + ++ E REGLT +IS++V P+FEGQTKT+LGN EV+ V Q+V
Sbjct: 308 ADPTISKQIEKAKVEIAPEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVQGAVQQAVN 367
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L++YLE HPD I K + A A +AA++AR+ V++K+ + LPGKLADCS
Sbjct: 368 EALSDYLEEHPDEAKRICEKVVLAATARIAARKARESVQRKNFMTGGGLPGKLADCSMKD 427
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P+E EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++
Sbjct: 428 PKECEIFLVEGDSAGGSAKQGRDRFRQAILPLRGKILNVEKVQWHKVFEAESVMNIIQSI 487
Query: 547 GL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
G+ GV GED K+ + LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+
Sbjct: 488 GVRFGVDGEDSKEANTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYI 547
Query: 602 GVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
PPLYK R K +YCY + + + K +++ QR+KGLGEM P QLWET
Sbjct: 548 ATPPLYKCTYRSKVSEYCYTEQQRQAFIDKYGDGVEDKNIHT-QRYKGLGEMNPEQLWET 606
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T++P R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 607 TMDPSTRLLKQVTIENAAQADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|169235747|ref|YP_001688947.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Halobacterium
salinarum R1]
gi|167726813|emb|CAP13599.1| DNA gyrase subunit B [Halobacterium salinarum R1]
Length = 637
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/638 (50%), Positives = 435/638 (68%), Gaps = 30/638 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAV+KRPAMYIGST RGLHHLVYE++DN++DEA AGY I+V L
Sbjct: 7 YSAGQIQVLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGYCDRIDVTLHD 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ H ++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDDGRGIPVATHEEYDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE L V V RDG Y +++ RG+PVT L V D GT IRF PD ++F T
Sbjct: 125 NALSERLAVEVSRDGARYREQFERGEPVTDLQH----VGDSDDSGTLIRFRPDSEIFETT 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+D +T+ R+RELAFLN + I L E D EY GG+ E+V++LN +
Sbjct: 181 A-YDFSTLENRLRELAFLNSGVEITLTDERGDEPTQSTFEY--EGGIREFVEYLNETRNA 237
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ F+ + DGI++++A+Q D S T +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 238 LHDDVIYFQGEDDGISVEIAMQASEDVQSSTH-AFANNINTREGGTHLTGFKTALTRTVN 296
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ + + D +L+G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+++V
Sbjct: 297 DYANDNNLLSELDGENLTGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVERAV 356
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L Y E +P +++ ++ A KA AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 357 NDGLGTYFEENPATAKAVVRTAVEAAKARKAAKKAEELTRRKSALGSTSLPGKLADCQSK 416
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
PE++E+F+VEGDSAGGSAKQGR+ FQAILPL GKILNVE+ + +++E++++I A
Sbjct: 417 APEDAELFVVEGDSAGGSAKQGRNPGFQAILPLGGKILNVEKHRLDRILEHDELRHIITA 476
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ G++F + LRY II++TDADVDGAHIRTLLLTFFYR+ K L + G +Y PP
Sbjct: 477 LGTGI-GDEFDIDELRYENIIMMTDADVDGAHIRTLLLTFFYRHMKPLLEAGYVYAAQPP 535
Query: 606 LYKVE-RGKQVQYCYD---DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
LY++ RGK YD +A+ +++ + +QRFKGLGEM P QLW+TT++PE
Sbjct: 536 LYRIRYRGK----TYDAMTEADRERIVEEQCNGNPTQVQRFKGLGEMNPQQLWDTTMDPE 591
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LK++ +EDAA A+ +FS LMG V+ RK+ IQ A
Sbjct: 592 NRILKRITVEDAAAADKMFSVLMGDAVEPRKQFIQERA 629
>gi|327401204|ref|YP_004342043.1| DNA gyrase subunit B [Archaeoglobus veneficus SNP6]
gi|327316712|gb|AEA47328.1| DNA gyrase, B subunit [Archaeoglobus veneficus SNP6]
Length = 621
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/639 (50%), Positives = 434/639 (67%), Gaps = 31/639 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +EQI+VL +EAVRKRP MYIG G RGLHHL++EI+DN++DEA AG+ NI V L
Sbjct: 3 YTAEQIEVLGDIEAVRKRPGMYIGGIGLRGLHHLLWEIVDNSIDEALAGHCKNITVTLHK 62
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP ++H + A+E VLT LHAGGKF + Y V+GGLHGVGLSVV
Sbjct: 63 DGSASVEDDGRGIPTEVH-ELGRPAVEIVLTKLHAGGKF--NKKAYKVAGGLHGVGLSVV 119
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V R+G Y+QKY RG PVT L + GT+IRF PD+++F T
Sbjct: 120 NALSEWLEVWVKRNGKIYYQKYERGVPVTPLQV----IGETKETGTKIRFKPDEEIFETT 175
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+F + +A R++ELA+LN + + L E S K Y+E G++ +V LN +K
Sbjct: 176 -EFRWDIVAQRLKELAYLNKGIRLKLIDERSGKSKEFYSE----DGIKGFVAQLNKNKPV 230
Query: 308 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 367
+HDV+ F ++ +GI +++A+Q+ +D + +L +AN+I TI+GGTH G +A LTR +N
Sbjct: 231 IHDVIHFSEEKNGIMVEVAIQF-TDTEIENVLFFANNINTIEGGTHAVGFRAGLTRAINE 289
Query: 368 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 427
GKK VK K L+G +REGLT ++SV+VP P+FEGQTKT+L N EV+ VV+ V
Sbjct: 290 FGKKY--VK-KFKPLTGADIREGLTAVVSVKVPEPQFEGQTKTKLTNSEVKTVVESIVYS 346
Query: 428 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 487
+ ++LE HP+ + I+ K + A+KA AA++AR++VR+K + S +LPGKLADCSS P
Sbjct: 347 EVLKWLEEHPNEANRIIEKCILAMKAREAARKAREIVRRKGEI-SITLPGKLADCSSKNP 405
Query: 488 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 547
EE E+FIVEG+SAGGSAKQ RDRRFQAILP+RGKI+NVE+ A +NEEI+ + A+
Sbjct: 406 EERELFIVEGESAGGSAKQARDRRFQAILPIRGKIINVEKAGMAKALRNEEIKAIAAAI- 464
Query: 548 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 607
G+DF RY ++II+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPLY
Sbjct: 465 GAGIGKDFDITKARYRRVIIMTDADVDGAHIRTLLLTFFYRYMKPLIESGYLYIAQPPLY 524
Query: 608 KVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 667
+V++GK+V Y Y D EL+ + NA +QR+KGLGEM P QLWETT+NP R L Q
Sbjct: 525 RVKKGKKVYYVYSDRELEDLLERI-GNA--EVQRYKGLGEMNPEQLWETTMNPHNRYLIQ 581
Query: 668 LVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+ +EDAA A +FS LMG V+ RK I +++ + NLD
Sbjct: 582 VTLEDAARAEELFSVLMGEDVEARKRFIMEHSKEVRNLD 620
>gi|373464810|ref|ZP_09556325.1| DNA gyrase, B subunit [Lactobacillus kisonensis F0435]
gi|371761865|gb|EHO50446.1| DNA gyrase, B subunit [Lactobacillus kisonensis F0435]
Length = 647
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/654 (49%), Positives = 433/654 (66%), Gaps = 19/654 (2%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A E + ++ Y + QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN +DEA
Sbjct: 1 MADEKETKKELAHEYDASQIQVLEGLEAVRKRPGMYIGTTSSQGLHHLVWEIVDNGIDEA 60
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AG+AS I V + DNSI P+D+ T K ALETV T+LHAGGKFGG
Sbjct: 61 LAGFASKITVTVEKDNSITVIDDGRGIPVDIQKKTGKPALETVFTILHAGGKFGGGGYKV 120
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
S LHGVG SVVNALS L+V V RDG Y+ ++RG T + V+ S D GT
Sbjct: 121 SGG--LHGVGASVVNALSSELDVEVTRDGKVYYMDFTRGHVKTKM--KVVKEVSDDLHGT 176
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
++ F PD +F +D + R+RELAFLN L I +R D PEK ++ + GG
Sbjct: 177 KVHFLPDPDIFRETTTYDIKVLTARLRELAFLNKGLRIVIR--DLRPEKPTEKDFMYEGG 234
Query: 294 LEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++ YV++L+ K+ L D + + V +GIT+++A+Q+ +D Y +T++ + N+I T +GGT
Sbjct: 235 IKHYVEYLDKSKETLLDEPIYVEGVMNGITVEVAIQYTND-YHNTLMTFTNNIHTYEGGT 293
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H EG K +LTR +N +K+K +KD + +LSGE VREG T ++S++ P+P+FEGQTKT+L
Sbjct: 294 HEEGFKRALTRVINDYARKNKLLKDNEANLSGEDVREGTTAVVSIKHPDPQFEGQTKTKL 353
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN + R V D+ ++ ++L +P + I+ + L A KA AAKRAR++ R+KS L
Sbjct: 354 GNSDARTVTDRIFSDHFAKFLMENPKMARKIVDRGLLASKARSAAKRAREVTRKKSGLEI 413
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLAD +S P SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+
Sbjct: 414 SNLPGKLADNTSKDPRISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR 473
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+ NEEI++L A+G G GEDF + YHK+II+TDADVDGAHI+TLLLT YRY +
Sbjct: 474 ILANEEIRSLFTAMGTGF-GEDFDLSKINYHKLIIMTDADVDGAHIQTLLLTLIYRYMRP 532
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L D G +YV PPLY+V +GK +Y D +L + + + IQR+KGLGEM Q
Sbjct: 533 LIDAGYVYVAQPPLYQVRQGKMSRYIDSDEDLSQFLGTLQPSPKPVIQRYKGLGEMDAEQ 592
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
LW+TT+NPE R L ++ DAAEAN VFS LMG +V+ R+E I++ A V NLD
Sbjct: 593 LWDTTMNPENRHLLRVESSDAAEANKVFSMLMGDKVEPRREFIEDNATFVENLD 646
>gi|433542996|ref|ZP_20499411.1| DNA gyrase subunit B [Brevibacillus agri BAB-2500]
gi|432185670|gb|ELK43156.1| DNA gyrase subunit B [Brevibacillus agri BAB-2500]
Length = 641
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/640 (49%), Positives = 438/640 (68%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AGY NI V +
Sbjct: 11 YDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNAIDEALAGYCDNILVVIHP 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP +H T KS +ETVLTVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSVSVTDNGRGIPTGIHEKTGKSTVETVLTVLHAGGKFGGGGYKVSGG--LHGVGSSVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +EV V ++ ++ +++ G P L + + GT++ F PD +FT
Sbjct: 129 NALSEWMEVEVKQNNKIHYMRFTVGTPDADLAV----IGETEETGTKVTFKPDPTIFTET 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F+++ + RIRELAFLN L I L+ D+ P++ + + + GG+ ++V++LN +++P
Sbjct: 185 TVFEYDVLQKRIRELAFLNKGLRITLK--DTRPDQEREESFHYEGGIVQFVEYLNKNREP 242
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ V+ + DG+ +++ALQ+ +D+Y + +AN+I T +GGTH G K +LTR +N
Sbjct: 243 LHEEVIYCEGEKDGLFVEVALQY-NDSYVSNIYSFANNINTHEGGTHETGFKTALTRVIN 301
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K +K+KD +LSG+ VREG+T IISV++ P+FEGQTKT+LGN E R + +
Sbjct: 302 DYSRKFNLLKEKDPNLSGDDVREGITAIISVKIQEPQFEGQTKTKLGNSEARSITESVFG 361
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ + ++E +P V ++ K+L A +A AA++AR++ R+KS L S+LPGKLADCSS
Sbjct: 362 DRFSTFMEENPGVAKKVVEKALMASRAREAARKAREMTRRKSALEVSALPGKLADCSSKD 421
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
ESE+FIVEGDSAGGSAK GRDR FQAILPLRGK+LNVE+ + N EI+ +I AL
Sbjct: 422 ASESELFIVEGDSAGGSAKSGRDRHFQAILPLRGKVLNVEKARLDKILGNNEIRMIITAL 481
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV GEDF RYHK++I+TDADVDG+HIRTLLLTFFYRY + L + G IY+ PPL
Sbjct: 482 GTGV-GEDFDISKARYHKVVIMTDADVDGSHIRTLLLTFFYRYMRQLIEAGYIYIAQPPL 540
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y +++GK + Y Y+D + ++ ++ + S+QR+KGLGEM QLWETT++P R L
Sbjct: 541 YSIKQGKTLHYAYNDKQRDEILATLKATPKPSVQRYKGLGEMNADQLWETTMDPAMRTLL 600
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ +EDA EA++VF +LMG V+ R+E I Q+AA++ +LD
Sbjct: 601 QVNLEDAMEADMVFETLMGDEVEPRREFIEQHAASVRDLD 640
>gi|399048558|ref|ZP_10740043.1| DNA gyrase, B subunit [Brevibacillus sp. CF112]
gi|398053620|gb|EJL45794.1| DNA gyrase, B subunit [Brevibacillus sp. CF112]
Length = 641
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/640 (49%), Positives = 438/640 (68%), Gaps = 21/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DNA+DEA AGY NI V +
Sbjct: 11 YDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNAIDEALAGYCDNILVVIHP 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP +H T KS +ETVLTVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSVSVTDNGRGIPTGIHEKTGKSTVETVLTVLHAGGKFGGGGYKVSGG--LHGVGSSVV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE +EV V ++ ++ +++ G P L + + GT++ F PD +FT
Sbjct: 129 NALSEWMEVEVKQNNKIHYMRFTVGTPDADLAV----IGETEETGTKVTFKPDPTIFTET 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F+++ + RIRELAFLN L I L+ D+ P++ + + + GG+ ++V++LN +++P
Sbjct: 185 TVFEYDVLQKRIRELAFLNKGLRITLK--DTRPDQEREESFHYEGGIVQFVEYLNKNREP 242
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ V+ + DG+ +++ALQ+ +D+Y + +AN+I T +GGTH G K +LTR +N
Sbjct: 243 LHEEVIYCEGEKDGLFVEVALQY-NDSYVSNIYSFANNINTHEGGTHETGFKTALTRVIN 301
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+K +K+KD +LSG+ VREG+T IISV++ P+FEGQTKT+LGN E R + +
Sbjct: 302 DYSRKFNLLKEKDPNLSGDDVREGITAIISVKIQEPQFEGQTKTKLGNSEARSITESVFG 361
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+ + ++E +P V ++ K+L A +A AA++AR++ R+KS L S+LPGKLADCSS
Sbjct: 362 DRFSTFMEENPGVAKKVVEKALMASRAREAARKAREMTRRKSALEVSALPGKLADCSSKD 421
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
ESE+FIVEGDSAGGSAK GRDR FQAILPLRGK+LNVE+ + N EI+ +I AL
Sbjct: 422 ASESELFIVEGDSAGGSAKSGRDRHFQAILPLRGKVLNVEKARLDKILGNNEIRMIITAL 481
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G GV GEDF RYHK++I+TDADVDG+HIRTLLLTFFYRY + L + G IY+ PPL
Sbjct: 482 GTGV-GEDFDITKARYHKVVIMTDADVDGSHIRTLLLTFFYRYMRQLIEAGYIYIAQPPL 540
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y +++GK + Y Y+D + ++ ++ + S+QR+KGLGEM QLWETT++P R L
Sbjct: 541 YSIKQGKTLHYAYNDKQRDEILATLKATPKPSVQRYKGLGEMNADQLWETTMDPAMRTLL 600
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
Q+ +EDA EA++VF +LMG V+ R+E I Q+AA++ +LD
Sbjct: 601 QVNLEDAMEADMVFETLMGDEVEPRREFIEQHAASVRDLD 640
>gi|261878836|ref|ZP_06005263.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
gi|270334578|gb|EFA45364.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
Length = 657
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 311/656 (47%), Positives = 432/656 (65%), Gaps = 33/656 (5%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +IEV +
Sbjct: 9 ENYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCDHIEVTI 68
Query: 135 LADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 69 NEDNSCTVEDNGRGIPVDQHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVS 126
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VNALS + V+RDG Y Q+Y +GKP+ + + + D++GTR +FWPD +FT
Sbjct: 127 CVNALSARMLSQVFRDGKAYQQEYEKGKPLYPVKV----IGNTDKRGTRQQFWPDPTIFT 182
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTD 304
T F + +A R+RELA+LN + I L + + E F A GL+E+V++++
Sbjct: 183 TRT-FQWDIVARRMRELAYLNAGIKITLTDLRPNEDGKIRQEVFHAKDGLKEFVRYIDRH 241
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 242 RTHLFDDVIYLKTEKQGVPIEVAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRQALTR 300
Query: 364 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
L + +K ++ + ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 301 VLKNYADNDPQIAKQIEKAKVEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTG 360
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+Q+V E LT YLE HP I K + A A +AA++AR+ V++KSV+ LPGKL
Sbjct: 361 AVNQAVGEALTNYLEEHPTEAKQICEKVVLAATARVAARKARESVQRKSVMTGGGLPGKL 420
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS+ P+ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 421 ADCSNKDPKLCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESV 480
Query: 540 QNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+I+++G+ GV GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ +
Sbjct: 481 MNIIQSIGVRFGVDGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKII 540
Query: 595 DEGCIYVGVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMM 649
+EG +Y+ PPLYK +GK +YCY++ + +K + + QR+KGLGEM
Sbjct: 541 EEGHLYIATPPLYKCTYKGKNSEYCYNEGQRLAYFQKYANGEEDSKNIHTQRYKGLGEMN 600
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT++P R+LKQ+ IE+AAEA+ FS LMG V+ R+E I+ A N+D
Sbjct: 601 PDQLWETTMDPANRLLKQVTIENAAEADETFSMLMGDDVEPRREFIEANAAYANID 656
>gi|50364821|ref|YP_053246.1| DNA gyrase subunit B [Mesoplasma florum L1]
gi|50363377|gb|AAT75362.1| DNA gyrase subunit B [Mesoplasma florum L1]
Length = 635
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/642 (47%), Positives = 432/642 (67%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+E I+VL+GLEAVRKRP MYIGST GLHHLV+EI+DN+VDEA AG+A+ I + +
Sbjct: 4 QNYGAESIKVLKGLEAVRKRPGMYIGSTSKAGLHHLVWEIMDNSVDEAMAGFANKIILTI 63
Query: 135 -------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
+ DN IP+ + + KSALE V T LHAGGKF S Y +SGGLHGVG S
Sbjct: 64 TKEGEIIVQDNGRGIPVGIQADSGKSALELVFTQLHAGGKF--DSDSYKISGGLHGVGAS 121
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS ++V V R+G +HQ +S G T + + + GT +RF PD ++F
Sbjct: 122 VVNALSLYVDVQVKREGKIHHQVFSGG---GTQQTEIEIIGETNETGTIVRFKPDPEIFL 178
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+FD+ TI ++++L++LN L I L +D +++ EY F G+ +YV+ N K
Sbjct: 179 EGTEFDYETIRNKVKQLSYLNKGLVIEL----NDLRIDKHVEYHFPNGILDYVKEKNETK 234
Query: 306 KPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
++ + + D D I +++ALQ+ ++ Y + ++ + N+I T +GGTH +G++ SL R
Sbjct: 235 VKINPSIFYVDDKHDDIEVEVALQYNAE-YQENLITFVNNINTHEGGTHEDGLRQSLVRV 293
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K T S + ++EG+ CI+S+R +P++EGQTKT+L NP+ +K VD
Sbjct: 294 INRYAEKVATGNKPAAKYSWDDIKEGMVCIVSIRHTDPQYEGQTKTKLANPDAKKAVDAV 353
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + E+L P+ +I+ K+ +A KA +AA+RAR+ R+KS L + SLPGKLADC S
Sbjct: 354 VGDAFEEFLLKSPEDAKAIIDKNANAQKARIAAQRAREETRRKSALDTFSLPGKLADCES 413
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
PE +E+++VEGDSAGGSAK GR+RRFQAILPLRGK+LNVER E + N EI++++
Sbjct: 414 KDPEIAELYLVEGDSAGGSAKTGRNRRFQAILPLRGKVLNVERVAEVRAFANNEIKSIVT 473
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A+G G+K ED LRY KI+I+TDADVDGAHIRTLLLTFFYRY K L +G +Y+ P
Sbjct: 474 AIGTGIK-EDIDLSKLRYGKIVIMTDADVDGAHIRTLLLTFFYRYMKQLVVDGHVYIAQP 532
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLYK+E GK+V Y Y D EL+++K+ ++ ++IQR+KGLGEM P+QLWETT++PE+R
Sbjct: 533 PLYKIEAGKKVAYAYSDVELEELKAGDFKDSRFTIQRYKGLGEMDPIQLWETTMDPEKRT 592
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ Q+ +EDAA AN VFS LMG + R+ IQ A V N+D
Sbjct: 593 MLQIKLEDAAIANEVFSDLMGEDPELRRNYIQENAEFVENID 634
>gi|448358868|ref|ZP_21547542.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
gi|445644548|gb|ELY97561.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
Length = 643
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/636 (48%), Positives = 427/636 (67%), Gaps = 20/636 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS LE TV RDG Y + G+PV + V + + GT I+FWPD+ +F TT
Sbjct: 125 NALSTRLETTVKRDGGVYKHAFEIGEPVGDME-RVRDMKPDEETGTEIQFWPDEDIFETT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 304
+ F +T++ R+RELAFLN + I LR E E + Y + GG+ E+V++LN
Sbjct: 184 DMSF--STLSNRLRELAFLNSGVRITLRDERERTEAGEAVAETYEYEGGIREFVEYLNET 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ +H D++ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 RSAMHEDIIYFEDEDQNVRVEVAIQ-ATKELQGSIHAFANNINTREGGTHLTGFKTALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G ++ + D + +L GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 301 VINDYGNENNLLSDIEENLKGEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEG 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 AMHDCLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
+ PEE+E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I
Sbjct: 421 TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMI 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
+G G+ G++F E +RY KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y
Sbjct: 481 TGIGAGI-GDEFDVEDVRYKKIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY++ + D E ++ +QRFKGLGEM P QLWETT+NPE R
Sbjct: 540 PPLYRIRYRGETYDAMTDVERDEIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPENR 599
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+LKQ+ +EDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 600 ILKQITVEDAAAADKMFSVLMGDAVEPRKQFIKENA 635
>gi|78185902|ref|YP_373945.1| DNA gyrase subunit B [Chlorobium luteolum DSM 273]
gi|78165804|gb|ABB22902.1| DNA gyrase subunit B [Chlorobium luteolum DSM 273]
Length = 644
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/655 (48%), Positives = 431/655 (65%), Gaps = 36/655 (5%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
EA + P S YG+ IQVL+G+ VR RPAMYIG RGLHHL+YEI+DN++DE G
Sbjct: 3 EADIQTPQS-NYGATNIQVLDGIAHVRMRPAMYIGDIHSRGLHHLIYEIVDNSIDETLGG 61
Query: 126 YASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 176
Y I V+L D S IP+D+HP KSALE V+T++ AGGKF Y VS
Sbjct: 62 YNDYIFVSLNPDGSVTVIDHGRGIPVDIHPDKKKSALELVMTLIGAGGKF--DKGAYKVS 119
Query: 177 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 236
GGLHGVG SVVNALSE EV V+RDG + Q+Y RG P V + + +GT+
Sbjct: 120 GGLHGVGASVVNALSEWCEVEVYRDGKAWFQRYHRGVP----EADVKEIGTTTERGTKTT 175
Query: 237 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 296
F PD ++F +F + I R+RELAFLN L I ++ + + E + F GGL+E
Sbjct: 176 FMPDSEIFKVT-EFRKDIIIDRMRELAFLNSNLKIVVQDIEGEQET-----FHFEGGLKE 229
Query: 297 YVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
+V + LN K+P++ + G + DG +++AL++ +D+Y + + Y N+I T +GG
Sbjct: 230 FVLFTDENRLNLIKEPIY-IYGEK---DGTIVEIALEY-NDSYQENVFSYVNNINTHEGG 284
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
TH+ G + +LTRTLN+ +K+ +K+ ++L+G+ +EGLT +ISV+V P+FEGQTKT+
Sbjct: 285 THVTGFRKALTRTLNAYAQKNDLLKNLKLALTGDDFKEGLTAVISVKVAEPQFEGQTKTK 344
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN E + +V+ + E L E+ E +P+V+ I+ K A + AA++A++L R+KSVL
Sbjct: 345 LGNSETQSIVESVLNEQLAEFAESNPNVIKMIIEKVKGAAMSREAARKAKELTRRKSVLE 404
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
SS LPGKLADCS PE E++IVEGDSAGGSAKQGRDR FQAILPL+GKILNVE+
Sbjct: 405 SSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLH 464
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK 591
M +NEEI+ +I ALG E+F E LRY KIII+TDADVDGAHIRTLLLTFF+R+ +
Sbjct: 465 KMLENEEIKTIILALGTNFGEEEFSAEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRHMR 524
Query: 592 TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF----PSNALYSIQRFKGLGE 647
+L + G +Y+ PPLY V+ GK+ QY +DD E + S A IQR+KGLGE
Sbjct: 525 SLIEAGKVYIAQPPLYLVKSGKEQQYAWDDDERNSISDSMKKMQKGKANVHIQRYKGLGE 584
Query: 648 MMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
M P QLW TT++PE R L Q+ +E+A EA+ VFS+LMG +V+ R+E I+ A V
Sbjct: 585 MNPEQLWGTTMDPEHRSLLQVSVENAMEADKVFSTLMGDKVEPRREFIEKNARYV 639
>gi|121889|sp|P21558.1|GYRB_HALSQ RecName: Full=DNA gyrase subunit B
gi|99223|pir||A39135 DNA topoisomerase chain B homolog - Haloferax sp
gi|149024|gb|AAB09605.1| DNA gyrase beta-subunit [Haloferax lucentense DSM 14919]
gi|1899004|gb|AAB49900.1| DNA gyrase beta-subunit [Shuttle vector pMDS20]
Length = 639
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/635 (50%), Positives = 428/635 (67%), Gaps = 20/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+ H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG++VV
Sbjct: 67 DGSVSVTDNGRGIPVGTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVTVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS LEV V DG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKHDGAVWTHRFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I+L SD ++ + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+FIVEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G GV G++F E RY ++I++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGGGV-GDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY+V D+AE ++ + +QRFKGLGEM P QLW+TT+NPE R+L
Sbjct: 538 LYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVL 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN 700
K++ +EDAA A+ +F+ LMG V RK+ I++ AN
Sbjct: 598 KRITVEDAAAADRMFNILMGDAVGPRKQFIKDHAN 632
>gi|448470584|ref|ZP_21600499.1| DNA gyrase subunit B [Halorubrum kocurii JCM 14978]
gi|445807833|gb|EMA57913.1| DNA gyrase subunit B [Halorubrum kocurii JCM 14978]
Length = 645
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/641 (49%), Positives = 437/641 (68%), Gaps = 18/641 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I
Sbjct: 2 PEQSEYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDDIT 61
Query: 132 VALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V + DNS IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGV
Sbjct: 62 VTVHDDNSVSVSDDGRGIPVDTHEKYDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGV 119
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
G+SVVNALSE LEV V RDG Y +++RG+P V +D+ + GT IRFWPD++
Sbjct: 120 GVSVVNALSERLEVEVKRDGGVYRHEFARGEPAEDGFERVRDLDADEETGTYIRFWPDEE 179
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 299
+F T F+ +T+A R+RELAFLN ++++L R E+S + + + GG+ E+V
Sbjct: 180 IFETT-DFEFSTLANRLRELAFLNSGVSVSLVDERDEESAADAGDEETFRYEGGIREFVG 238
Query: 300 WLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
+LN + P+H+ V+ F + D I +++A+Q ++ ++ +AN+I T +GGTH+ G K
Sbjct: 239 YLNETRTPIHEEVIYFEDEQDDIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFK 297
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTRT+N + V D + +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 298 TALTRTVNDYANEHGLVDDLEANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 357
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
+V+ + E L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPGK
Sbjct: 358 GIVESATHEKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGK 417
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC + P E+E+F+VEGDSAGGSAKQGR+R QAILPL+GKILNVE+ + +N+E
Sbjct: 418 LADCQTRDPTEAELFVVEGDSAGGSAKQGRNRENQAILPLKGKILNVEKHRLDRILENDE 477
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+ LI A+G G+ GE+F + +RY+KIII+TDADVDGAHIRTLLLT YR+ K L + G
Sbjct: 478 IRALITAIGAGI-GEEFDIDDVRYNKIIIMTDADVDGAHIRTLLLTLLYRHMKPLLEAGY 536
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY+V + +AE ++ + + +QRFKGLGEM P QLW+TT+
Sbjct: 537 VYAAQPPLYRVRYRGETYDAMTEAERDRIVAEECDGSPDQVQRFKGLGEMNPDQLWDTTM 596
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
+PE R LK++ ++DAA A+ +F+ LMG V+ RK+ I+ A
Sbjct: 597 DPENRRLKRINVDDAAAADRMFNVLMGDAVEPRKQFIKEHA 637
>gi|317504159|ref|ZP_07962158.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
gi|315664735|gb|EFV04403.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
Length = 656
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/654 (47%), Positives = 432/654 (66%), Gaps = 34/654 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +++E+ L
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVEITLNE 70
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS + V+RDG Y Q+Y +GKP+ + V ++GTR +FWPD +FTT
Sbjct: 129 NALSTHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTIFTTT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 306
+ + +A R+RELA+LN + I L D E E F A GL+E+V++++ +
Sbjct: 185 T-YKWDIVASRMRELAYLNAGIRITLTDMRHDEEGKIRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 307 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 366 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADAEPTIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E L+ YLE HP I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKNVMTGGGLPGKLAD 422
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS+ P+E EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E + N
Sbjct: 423 CSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMN 482
Query: 542 LIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + ++
Sbjct: 483 IIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIED 542
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPV 651
G +Y+ PPLYK K +YCY + + K V L++ QR+KGLGEM P
Sbjct: 543 GHLYIATPPLYKCTYKKVSEYCYTEQQRQAFIDKYVDGKEDDKGLHT-QRYKGLGEMNPE 601
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+LKQ+ I++AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 QLWETTMDPKSRLLKQVTIQNAAEADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|392389999|ref|YP_006426602.1| DNA gyrase subunit B [Ornithobacterium rhinotracheale DSM 15997]
gi|390521077|gb|AFL96808.1| DNA gyrase, B subunit [Ornithobacterium rhinotracheale DSM 15997]
Length = 649
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/655 (48%), Positives = 441/655 (67%), Gaps = 28/655 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N K Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AGY S I
Sbjct: 2 NENQKQYTADSIQSLEGMEHVRLRPSMYIGDVGKRGLHHLVYEVVDNSIDEALAGYCSMI 61
Query: 131 EVAL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 181
+V + + DN IP+D H KSALE V+T + AGGKF S Y VSGGLHG
Sbjct: 62 DVIIHEGESITVKDNGRGIPVDFHKKEGKSALEVVMTKIGAGGKFDKDS--YKVSGGLHG 119
Query: 182 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 241
VG+S VNALS L TV+R+G Y Q+Y+RGK + V + DR GT + F PD
Sbjct: 120 VGVSCVNALSNKLTATVYRNGKIYQQEYARGKAL----GDVQEIGETDRTGTTVTFSPDD 175
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQ 299
+F ++ T+A R+REL+FLN ++I L E E Y +E F + GGL+E+V+
Sbjct: 176 SIFNHT-EYSFETLAARLRELSFLNKGISITLTDERVKDENGNYLSEVFHSEGGLKEFVE 234
Query: 300 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
+++ +++PL V+ ++D I +++A+++ + ++++ + Y N+I T +GGTH+ G +
Sbjct: 235 FIDENREPLMQKVIFMEGEIDDIPVEVAMRYNT-SFNENLHSYVNNINTHEGGTHLTGFR 293
Query: 359 ASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
+LTRTL + + K+KD IS++G+ REGLT ++SV+V P+FEGQTKT+LGN EV
Sbjct: 294 RALTRTLKKYADEKMSAKEKDKISITGDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEV 353
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
VD+ V E LT YLE +P I+ K + A KA AAK+AR++V++KS + S LPG
Sbjct: 354 SGAVDKIVSEMLTNYLEENPSEAQIIVDKVVLAAKARQAAKKAREMVQRKSPMGGSGLPG 413
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCSS P ESEIF+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + +++NE
Sbjct: 414 KLADCSSKDPYESEIFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKAMQHKVFENE 473
Query: 538 EIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
EI+N+ ALG+ + E+ K E LRYHKI+I+TDADVDG+HI TL+LTFF+RY K L
Sbjct: 474 EIKNIFTALGVTIGTEEDAKALNTEKLRYHKIVIMTDADVDGSHIATLILTFFFRYMKEL 533
Query: 594 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL---YSIQRFKGLGEMMP 650
+ G IY+ PPLY +++GKQ Y + D E ++++ + S+QR+KGLGEM
Sbjct: 534 IENGNIYIATPPLYLLKKGKQEIYAWGDKEREEIQRQMSPDGTGRGISVQRYKGLGEMNA 593
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW+TT+NPE R L+Q+ IE+A+EA+ +FS LMG V R+E I+ A N+D
Sbjct: 594 EQLWDTTMNPENRKLRQVNIENASEADRIFSMLMGDDVPPRREFIEKNAVYANID 648
>gi|313884315|ref|ZP_07818078.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
gi|312620468|gb|EFR31894.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
Length = 639
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 321/640 (50%), Positives = 432/640 (67%), Gaps = 22/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVRKRP MYIG+T GLHHLV+EI+DN++DEA AGY +IEV + A
Sbjct: 10 YNADQIQVLEGLEAVRKRPGMYIGTTSIDGLHHLVWEIVDNSIDEALAGYCDHIEVFIEA 69
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D+ T + A ETV TVLHAGGKFG S Y VSGGLHGVG +VV
Sbjct: 70 DNSITVIDNGRGIPVDIQSKTGRPAAETVYTVLHAGGKFGNDS--YKVSGGLHGVGAAVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L + ++R+G +H ++ RG +T + + + GT++ F PD +FT
Sbjct: 128 NALSTHLTLEIFREGKIHHLEFERG----LVTKELEVIGETELVGTKVNFVPDGTIFTDT 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F + + RI+ELAFLN L I+L ED E+ + +F+ GGL+ +++ LN KKP
Sbjct: 184 TDFKYERLKDRIQELAFLNRGLRISL--EDKREERQASDSFFYEGGLKSFIEHLNHAKKP 241
Query: 308 LHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ F + ++D I +++ALQ+ +D+YS +L +AN+I T +GG H G K +LTR +N
Sbjct: 242 LHEEPIFLEGEMDDIAVEIALQY-TDSYSTNLLSFANNIHTHEGGMHESGFKTALTRIIN 300
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ + +KD D +LSGE REGLT IISV+ P+P+FEGQTKT+LGN EVR +VD+
Sbjct: 301 DYARNNNLLKDSDDNLSGEDTREGLTAIISVKHPDPQFEGQTKTKLGNSEVRTIVDRLFT 360
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
+L +P V I+ K + A +A AAKRAR++ R+KS L ++LPGKLADCSS
Sbjct: 361 AEFNTFLLENPRVAKIIVEKGILAARARSAAKRAREMTRKKSGLEIANLPGKLADCSSKE 420
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
E+ E+FIVEGDSAGGSAKQGR R +QAILP+RGKILNVE+ + NEEI+++ A+
Sbjct: 421 AEKCELFIVEGDSAGGSAKQGRSRMYQAILPIRGKILNVEKATMDRILANEEIRSMFTAM 480
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G G +F +RYHK+II+TDADVDGAHIRTLLLT +RY + L + G +Y+ PPL
Sbjct: 481 GTGF-GSEFDVNNVRYHKLIIMTDADVDGAHIRTLLLTLIFRYMRPLIEAGYVYIAQPPL 539
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V+ GK+ Y D EL K + + P +A Y +QR+KGLGEM QLWETT+NPE R L
Sbjct: 540 YQVKVGKKETYLDTDEELNKWRKANP-DARYKLQRYKGLGEMDYEQLWETTMNPENRRLL 598
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ +EDA A+ V S LMG V+ R+ I+ NA + NLD
Sbjct: 599 RVKVEDAEVADQVMSMLMGEDVEPRRAFIEDNAVYVQNLD 638
>gi|431380558|ref|ZP_19510939.1| DNA gyrase subunit B [Enterococcus faecium E1627]
gi|430582426|gb|ELB20853.1| DNA gyrase subunit B [Enterococcus faecium E1627]
Length = 647
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 321/647 (49%), Positives = 438/647 (67%), Gaps = 26/647 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFTPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD + +A RIRELAFLN + I++ + +P NEY + GG++ YV++LN +
Sbjct: 185 TETTEFDFSKLATRIRELAFLNRGMRISIEDKREEP---VINEYHYDGGIKSYVEYLNAN 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 242 KTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 301 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 361 LFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 421 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 481 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 539
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QLWETT++
Sbjct: 540 PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD 599
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 600 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 646
>gi|431438001|ref|ZP_19513164.1| DNA gyrase subunit B [Enterococcus faecium E1630]
gi|431760030|ref|ZP_19548634.1| DNA gyrase subunit B [Enterococcus faecium E3346]
gi|430586836|gb|ELB25078.1| DNA gyrase subunit B [Enterococcus faecium E1630]
gi|430625299|gb|ELB61939.1| DNA gyrase subunit B [Enterococcus faecium E3346]
Length = 648
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/647 (49%), Positives = 438/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFTPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV++LN +
Sbjct: 185 TETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEETVINEYHYDGGIKSYVEYLNAN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GE F RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 TAMGTGF-GEAFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QLWETT++
Sbjct: 541 PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD 600
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 601 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|392396308|ref|YP_006432909.1| DNA gyrase subunit B [Flexibacter litoralis DSM 6794]
gi|390527386|gb|AFM03116.1| DNA gyrase subunit B [Flexibacter litoralis DSM 6794]
Length = 677
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/655 (47%), Positives = 437/655 (66%), Gaps = 34/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL- 134
YG++ IQVLEGLEAVRKRPAMYIG G +GLHHL++E++DN++DEA AG+ I V +
Sbjct: 31 NYGADNIQVLEGLEAVRKRPAMYIGDVGVKGLHHLIWEVVDNSIDEALAGHCDTIHVTIN 90
Query: 135 ------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
+ DN IP D+H N+SALE V+TVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 91 EGDTITVRDNGRGIPTDIHTKENRSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSC 148
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ L V V R+G + Q+YS G P + V + + D GT++ F PD +FT
Sbjct: 149 VNALSDHLRVEVHRNGKIFEQEYSCGAPKYS----VREIGTTDVSGTQVTFHPDATIFTH 204
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIAL---RKE--DSDPEKNQYNEYFFA-GGLEEYVQW 300
++ F + T+A R+REL++LN + I L RKE D D N E F + GGL E+V++
Sbjct: 205 SV-FKYETVANRLRELSYLNAGVKITLSDQRKEFGDKDENGNFVTETFLSEGGLREFVEF 263
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
L+ + + + + D + + + +A+ + + +YS+ + Y N+I TI+GGTHI G
Sbjct: 264 LDKSRTAIIPNAIYVEGDKNDVPVQVAILYNT-SYSENVFSYVNNINTIEGGTHITGFYR 322
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
+LTR L S K+ + DK + LSG REG+T +ISV+V P+FEGQTKT+LGN EV
Sbjct: 323 ALTRVLKSYADKN-GLTDKKVELSGGDFREGMTAVISVKVMEPQFEGQTKTKLGNSEVSG 381
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V+ V + L YLE +P I+ K A +A +AA++AR++V++K+ L + LPGKL
Sbjct: 382 AVESCVADALYNYLEENPKEAKIIIQKVTLAAQARMAARKAREMVQRKTALSGTGLPGKL 441
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCS PE+ EI++VEGDSAGGSAKQGRDR+ QAILPLRGKILNVE+ E +Y NEEI
Sbjct: 442 ADCSEKDPEKCEIYLVEGDSAGGSAKQGRDRQSQAILPLRGKILNVEKAQEHRIYDNEEI 501
Query: 540 QNLIRALGL----GVKGEDF-KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
+N+I ALG+ +GE + + LRYHKI+I+TDADVDG+HIRTL+LT F+RY K L
Sbjct: 502 KNIITALGIRFGENEQGEKYLNLDKLRYHKIVIMTDADVDGSHIRTLILTLFFRYMKDLV 561
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
++G +Y+ PPLY +++GKQ YC+D+ + ++++ S + +IQR+KGLGEM P
Sbjct: 562 EKGYVYIAQPPLYLIKKGKQKIYCWDEPQREQAMRELGGSNGNMNGVNIQRYKGLGEMNP 621
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NPE R +K++ +E AA A+ +FS LMG V R+E I+ A +D
Sbjct: 622 EQLWETTMNPETRSMKRVDVESAAAADQLFSMLMGDEVAPRREFIEKNARYARVD 676
>gi|260584261|ref|ZP_05852008.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633]
gi|260157779|gb|EEW92848.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633]
Length = 645
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/655 (47%), Positives = 430/655 (65%), Gaps = 21/655 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE KE ++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEENKE-VLAAQYDASQIQVLEGLEAVRKRPGMYIGSTSSAGLHHLVWEIVDNSIDEALA 60
Query: 125 GYASNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+A++IE+ + +N IP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 61 GFATHIEIEITPENHIRVTDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 120
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
LHGVG SVVNALS L V V++DG Y Q Y RG + L V ++ GT +
Sbjct: 121 G--LHGVGASVVNALSTDLTVQVFKDGNIYEQSYKRGAVLEDLKI----VGQTEKHGTSV 174
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++F +D +A R+RELAFLN L + + D E+ +++ GG++
Sbjct: 175 YFVPDPEIFQETTVYDFEKLANRVRELAFLNKGLKLTIT--DLRVEEPVVKTFYYEGGIK 232
Query: 296 EYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YV+ LN K+ L + + + DGI +++A+Q+ S Y +L + N+I T +GGTH
Sbjct: 233 SYVEHLNKSKQVLFEEPIYVEGEQDGIQVEVAMQYTS-GYHTNLLSFTNNIHTYEGGTHE 291
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
G+K +LTR +N ++ K +K+ + LSGE VREGLT ++S++ P+P+FEGQTKT+LGN
Sbjct: 292 SGMKTALTRVINDYARRQKLMKENEEKLSGEDVREGLTAVVSIKHPDPQFEGQTKTKLGN 351
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
E R + D+ + ++L +P V I+ K + A KA LAAKRAR++ R+KS L S+
Sbjct: 352 SEARTITDRLFATHFDKFLMENPQVARKIVEKGILASKARLAAKRAREVTRKKSGLEISN 411
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P SEIFIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ +
Sbjct: 412 LPGKLADCSSNDPSVSEIFIVEGDSAGGSAKQGRSRHFQAILPIRGKILNVEKASLDKIL 471
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
N+EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLL+T FYRY + +
Sbjct: 472 ANDEIRSLFTAMGTGFGG-DFDLSKARYHKLVIMTDADVDGAHIRTLLITLFYRYMRPVV 530
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 654
+ G +Y+ PPLYK+++GKQ Y +D EL+ P++ I R+KGLGEM QLW
Sbjct: 531 EAGYVYIAQPPLYKLKQGKQEFYIQNDEELEAKLKELPASPKPQISRYKGLGEMDAEQLW 590
Query: 655 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
ETT+NP+ R + Q+ +EDAAEA+ V LMG +V+ R+E I+ + ++++ LDI
Sbjct: 591 ETTMNPQNRSMLQVTVEDAAEADQVLDMLMGDKVEPRREFIEANSKFIDVNDLDI 645
>gi|390953352|ref|YP_006417110.1| DNA gyrase subunit B [Aequorivita sublithincola DSM 14238]
gi|390419338|gb|AFL80095.1| DNA gyrase subunit B [Aequorivita sublithincola DSM 14238]
Length = 646
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 300/646 (46%), Positives = 428/646 (66%), Gaps = 25/646 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG++QIQ LEG+E VR RP+MYIG GPRGLHHLVYE++DN++DEA GY IE+ +
Sbjct: 9 SYGADQIQALEGMEHVRMRPSMYIGDVGPRGLHHLVYEVVDNSIDEAMGGYCDTIEMWIN 68
Query: 136 ADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNS IP+DLH SAL+ V+T + AGGKF S Y VSGGLHGVG+SV
Sbjct: 69 EDNSVTVKDNGRGIPVDLHKKEGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSV 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS L TV RDG + Q+Y RGK + V P+ D +GT + F PD +F
Sbjct: 127 VNALSGHLTATVHRDGKIWQQEYERGKALYP----VKPIGETDYRGTIVTFKPDADIFQQ 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 304
++++++T+A R+REL+FLN LTI + + EK + ++ GL+E++++L+ +
Sbjct: 183 TLEYNYDTLASRMRELSFLNRGLTIYVTDKRHKDEKGEVVTEKFHSEEGLKEFIRFLDGN 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++P+ V+ + + I +++A+ + + ++++ + Y N+I T +GGTH+ G +A LTR
Sbjct: 243 REPIIAQVISMEGEKNDIPVEVAMVYNT-SFNENLHSYVNNINTHEGGTHLAGFRAGLTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL S + ++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q
Sbjct: 302 TLKKYADASGMLDKLKFEIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVMAAVSQ 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L YLE HP+ +I+ K + A +A AA++AR++V++K+V+ LPGKL+DCS
Sbjct: 362 AVSEMLENYLEEHPNDAKTIVQKVILAAQARHAARKAREMVQRKTVMSGGGLPGKLSDCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
PE+ E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +++NEEI+N+
Sbjct: 422 EQDPEKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMHHKVFENEEIRNIY 481
Query: 544 RALGLGVKGEDFKKE----ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ K LRYHK++I+ DADVDG+HI TL+LTFF+RY + L + G I
Sbjct: 482 TALGVTIGTEEDSKALNLTKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRELVEGGHI 541
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLY V++G + +Y + D E ++ F +A IQR+KGLGEM QLW TT+N
Sbjct: 542 YIATPPLYLVKKGAKKEYAWSDKERDRLNEEFGGSA--GIQRYKGLGEMNAEQLWVTTMN 599
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
PE R L+Q+ I++ EA+ +FS LMG V R+E I+ A N+D
Sbjct: 600 PEFRTLRQVTIDNGTEADRIFSMLMGDEVPPRREFIEKNAIYANID 645
>gi|418689258|ref|ZP_13250380.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
gi|400361403|gb|EJP17369.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
Length = 639
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/641 (47%), Positives = 431/641 (67%), Gaps = 20/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G Y QKY RG PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYERGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE+++VEGDSAGGSAKQGRDR QAILPL+GKILNVE+ + +EEI+ L+ A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ ++F + +RYHKI+I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PP
Sbjct: 479 LGTGIGEDEFNIDKIRYHKIMIMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY ++ GK Y Y D E +++ + + + IQR+KGLGEM P QLWETT++P R++
Sbjct: 539 LYLIKHGKNSTYVYSDKEKEELLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVV 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ ++D EA F+ LMG V RK+ I+ NAA + NLD
Sbjct: 598 LKVKLDDFVEAEETFNVLMGDEVQPRKQFIEVNAAKVANLD 638
>gi|433452726|ref|ZP_20412950.1| DNA gyrase, B subunit [Mycoplasma sp. G5847]
gi|431933537|gb|ELK20112.1| DNA gyrase, B subunit [Mycoplasma sp. G5847]
Length = 634
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/644 (47%), Positives = 425/644 (65%), Gaps = 22/644 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I+VL+GLEAVR RP MYIGST GLHHLV+EILDN++DEA AGYA+ I V
Sbjct: 1 MSHEYSAESIKVLKGLEAVRTRPGMYIGSTSKTGLHHLVWEILDNSIDEAMAGYANLINV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DN IP+ ++ TNKSAL V T LHAGGKF S Y +SGGLHGVG
Sbjct: 61 TITKDNEVIVQDNGRGIPVGINSDTNKSALSLVFTQLHAGGKF--DSETYKISGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
SVVNALS +EV V+RD YHQ +S G T + + + QGT+++F PD ++
Sbjct: 119 ASVVNALSLFVEVDVYRDNTHYHQLFSEG---GTKESALEQLGHTELQGTKVKFKPDPEI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F + FD+ I ++++LAFLN L I L +D + EY F G+ +Y++ N
Sbjct: 176 FKETVIFDYEIIKNKVKQLAFLNKGLKITL----TDERIEKTVEYLFVNGILDYIKEKNE 231
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K ++ ++ + I +++ALQ+ SD Y + ++ + N+I T +GGTH +G+K +L
Sbjct: 232 TKNKINPNIFYVDSKYEDIEVEMALQYNSD-YQENIITFVNNINTHEGGTHEDGLKQALI 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N S + ++EG+ CI+SVR +P++EGQTKT+L NP+ ++ V+
Sbjct: 291 RDINRYADTVIKNTKSPSKFSWDDIKEGMMCILSVRHTDPQYEGQTKTKLSNPDAKEAVN 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E+L P+ +IL K+++A KA +AA++AR+ R+KS L S SLPGKLADC
Sbjct: 351 IIIGNAFEEFLLKSPEDAKAILDKNVNAQKARIAAQKAREETRRKSALDSFSLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ +E+++VEGDSAGGSAK GR+R+FQAILPLRGK+LNVER EA + N EI+++
Sbjct: 411 ETKDSSIAELYLVEGDSAGGSAKTGRNRKFQAILPLRGKVLNVERVTEARAFSNNEIKSI 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A+G G+K E+ LRY KI+I+TDADVDGAHIRTLLLTFFYRY K L G IY+
Sbjct: 471 ITAVGTGIK-EELDLSKLRYKKIVIMTDADVDGAHIRTLLLTFFYRYMKPLVANGHIYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLYK+E GK++ Y Y DA+L ++K++ +N Y+IQR+KGLGEM P+QLWETT++P+Q
Sbjct: 530 QPPLYKIEAGKKIAYAYTDAQLDELKNNEFNNLKYTIQRYKGLGEMDPLQLWETTMDPQQ 589
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R + Q+ +EDA AN VFS LMG + RK IQ+ A V N+D
Sbjct: 590 RTMLQISLEDATLANEVFSDLMGEDPELRKNYIQDNAKFVENID 633
>gi|240145738|ref|ZP_04744339.1| DNA gyrase, B subunit [Roseburia intestinalis L1-82]
gi|257202154|gb|EEV00439.1| DNA gyrase, B subunit [Roseburia intestinalis L1-82]
gi|291536986|emb|CBL10098.1| DNA gyrase subunit B [Roseburia intestinalis M50/1]
gi|291539810|emb|CBL12921.1| DNA gyrase subunit B [Roseburia intestinalis XB6B4]
Length = 645
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 330/656 (50%), Positives = 441/656 (67%), Gaps = 25/656 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+ATE ENP YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA
Sbjct: 1 MATEKI-ENP--NEYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEA 57
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AGY NIEV + DNSI P+ ++ KSALE V TVLHAGGKFGG
Sbjct: 58 LAGYCKNIEVTINPDNSITVEDDGRGIPVGMNHKAGKSALEVVYTVLHAGGKFGGGGYKV 117
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
S LHGVG SVVNALS L V V+++G Y Q Y GKP + V+ ++ GT
Sbjct: 118 SGG--LHGVGASVVNALSTKLCVEVYKEGQVYFQSYHIGKPDEPVK--VIGTCDSEKHGT 173
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
++ F PD ++F + +D++T+ R+RE AFL L I L D+ E + +E+ +AGG
Sbjct: 174 KVTFHPDPEIFEETV-YDYDTLKQRLRETAFLTKGLRIVLT--DTREESHHCHEFHYAGG 230
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++E+V +LN K+ L+ DV+ DG+ +++A+Q +D+Y+D + N+I T +GGT
Sbjct: 231 IKEFVTYLNRSKEALYPDVIYCEGTRDGVYVEVAMQH-NDSYNDATYSFVNNIITPEGGT 289
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H+ G + +LT+T N+ + +K +KD + +L+G+ +REGLT IIS+++ P+FEGQTK +L
Sbjct: 290 HLAGFRNALTKTFNTYARANKILKDSEPALTGDDIREGLTAIISIKIEEPQFEGQTKQKL 349
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN E R VD V E LT +LE +P V SI KSL A +A AA++ARDL R+K+ L
Sbjct: 350 GNSEARGAVDSVVSEQLTYFLEQNPAVAKSICEKSLLAQRAREAARKARDLTRRKTALEG 409
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
+SLPGKLADCS P+ EIFIVEGDSAGGSAK R R QAILPLRGKILNVE+
Sbjct: 410 TSLPGKLADCSDKDPKNCEIFIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKARLDK 469
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+Y N EI+ +I A G G+ EDF LRY KIII+TDADVDGAHI TL+LTF YR+
Sbjct: 470 IYGNAEIKAMITAFGTGIH-EDFDISKLRYDKIIIMTDADVDGAHIATLMLTFLYRFMPE 528
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L +G +Y+ PPLYK+E+ K + Y YDDAEL + + IQR+KGLGEM Q
Sbjct: 529 LIKQGHVYLATPPLYKIEKNKNIWYAYDDAELNNILIEIGRDGNNKIQRYKGLGEMDAEQ 588
Query: 653 LWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
LWETT++PE+R+LK+++I E+++E +V F++LMG +V+ R+E I +NA + NLD
Sbjct: 589 LWETTMDPEKRILKRVMIDEENSSEIDVTFTTLMGDKVEPRREFIEENAKYVQNLD 644
>gi|417767171|ref|ZP_12415116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417770211|ref|ZP_12418121.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418684138|ref|ZP_13245327.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418705137|ref|ZP_13266002.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418713024|ref|ZP_13273751.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|418724755|ref|ZP_13283564.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|421117277|ref|ZP_15577640.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421124386|ref|ZP_15584643.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135176|ref|ZP_15595301.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|24753767|gb|AAN64015.1|AF434658_12 DNA gyrase subunit B [Leptospira interrogans]
gi|321401258|gb|ADW83040.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401262|gb|ADW83042.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401266|gb|ADW83044.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401270|gb|ADW83046.1| DNA gyrase subunit B [Leptospira interrogans]
gi|400324101|gb|EJO76401.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400350290|gb|EJP02554.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|409947765|gb|EKN97759.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409962076|gb|EKO25818.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|410010988|gb|EKO69116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020594|gb|EKO87394.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437517|gb|EKP86616.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410764988|gb|EKR35690.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410790107|gb|EKR83801.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|455668938|gb|EMF34110.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 639
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/641 (47%), Positives = 431/641 (67%), Gaps = 20/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G Y QKY RG PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYERGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE+++VEGDSAGGSAKQGRDR QAILPL+GKILNVE+ + +EEI+ L+ A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ ++F + +RYHKI+I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PP
Sbjct: 479 LGTGIGEDEFNIDKIRYHKIMIMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY ++ GK Y Y D E +++ + + + IQR+KGLGEM P QLWETT++P R++
Sbjct: 539 LYLIKHGKNSTYVYSDKEKEELLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVV 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ ++D EA F+ LMG V RK+ I+ NAA + NLD
Sbjct: 598 LKVKLDDFVEAEETFNILMGDEVQPRKQFIEVNAAKVANLD 638
>gi|366163637|ref|ZP_09463392.1| DNA gyrase subunit B [Acetivibrio cellulolyticus CD2]
Length = 641
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/642 (49%), Positives = 429/642 (66%), Gaps = 23/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY + IE+ +
Sbjct: 10 SYNESNIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIMDNSIDEALAGYCTEIEITIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ +HP +E V T+LHAGGKFGG GY+VSGGLHGVG SV
Sbjct: 70 PDNSITNIDNGRGIPVGIHPKMGIPTVEVVHTILHAGGKFGGE--GYTVSGGLHGVGASV 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V+RDG Y Q+Y RG T L + + ++ GT+ F PD +F
Sbjct: 128 VNALSEYLEVEVYRDGNIYKQRYERGNVATKLEV----IGTTEKTGTKTTFKPDSLIFE- 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
++F + + R RELAFLN L I L D PE+ + + GG+ +V+++N +K
Sbjct: 183 EMEFSFDILLNRFRELAFLNKGLMITLI--DKRPEEPIVKKLHYEGGIISFVEYMNRNKG 240
Query: 307 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ + + DG +++++Q+ +D Y + + +AN+I T +GGTH+ G K ++T+
Sbjct: 241 VIQEHPIYIDCSKDGSNVEISMQY-NDTYVENIFSFANNIATTEGGTHLTGFKTAITKVF 299
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +K +KD D +L+GE +REGLT +ISV++ P+FEGQTKT+LGN E+R +V+ +V
Sbjct: 300 NDYARKYNYLKDNDKNLAGEDIREGLTAVISVKLQEPQFEGQTKTKLGNSEIRSLVEFTV 359
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L +LE +P V +IL K L+A +A AA++ARDL R+KS L +++LPGKLADCS
Sbjct: 360 GEKLASFLEENPSVTKTILDKCLTAARAREAARKARDLTRRKSALETTTLPGKLADCSEK 419
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P EI+IVEGDSAGGSAKQGRDR+FQAILPL GK+LNVE+ +Y NE++ +I A
Sbjct: 420 DPSLCEIYIVEGDSAGGSAKQGRDRKFQAILPLWGKMLNVEKSRIDKVYDNEKLLPVITA 479
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG + G+DF E LRYHKIII+ DADVDG HIRTLLLTF +RY K L + G +Y+ PP
Sbjct: 480 LGASI-GDDFDVEKLRYHKIIIMADADVDGQHIRTLLLTFMFRYMKPLVEGGYVYIAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
L+K+ +GK+ Y Y++ ++ + SIQR+KGLGEM P QLWETT+NPE R
Sbjct: 539 LFKIAKGKEEGYAYNEKQVDNFINEKGWKKDECSIQRYKGLGEMNPEQLWETTMNPETRT 598
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ ++ + DA A+ +F+ LMG +V+ RKE IQ A V NLD
Sbjct: 599 MLRVELSDAIAADEIFTILMGDKVEPRKEFIQTHAKTVTNLD 640
>gi|297582344|ref|YP_003698124.1| DNA gyrase subunit B [Bacillus selenitireducens MLS10]
gi|297140801|gb|ADH97558.1| DNA gyrase, B subunit [Bacillus selenitireducens MLS10]
Length = 637
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 311/642 (48%), Positives = 432/642 (67%), Gaps = 22/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ S+I V +
Sbjct: 6 QSYDESQIQVLEGLEAVRKRPGMYIGSTNERGLHHLVWEIVDNSIDEAMAGHCSHIWVTI 65
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DN+I P+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 66 EEDNTITVEDDGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 123
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALS LEV V ++G ++ + RG L + S ++ GT IRF D +FT
Sbjct: 124 VVNALSSFLEVEVHKEGEVHYISFERGAVKEELNV----IGSTEKTGTLIRFKADNMIFT 179
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D + +A R+REL+FLN LTI + + E+++ +YF+ GG+ +V+ LN K
Sbjct: 180 ETTVYDFDVLANRLRELSFLNKGLTIEITDK---REEDKSAKYFYEGGISSFVEHLNRTK 236
Query: 306 KPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
LH+ F + +GI +++A+Q+ +D+++ + +AN+I T +GGTH G K +LTR
Sbjct: 237 TALHEPPIFIESEKEGIQVEVAMQY-NDSFASNLYSFANNINTHEGGTHESGFKTALTRV 295
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ K+ D +L G+ VREGLT I+SV++ NP+FEGQTKT+LGN E R + D
Sbjct: 296 INDYARKNGLFKENDPNLIGDDVREGLTAIVSVKIENPQFEGQTKTKLGNSEARTITDSL 355
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E++ +++ +P V I+ K + A +A AAK+AR+L R+KS L SSLPGKLADCS+
Sbjct: 356 FTEHMAKFMAENPTVARQIVEKGIMASRARDAAKKARELTRRKSALEVSSLPGKLADCST 415
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SEI++VEGDSAGGSAKQGRDR FQAILPLRGKI+NVE+ + N EI+ +I
Sbjct: 416 KDASISEIYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILANNEIRAIIT 475
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ GE+F RYHKIII+TDADVDGAHIRTLLLTF YRY + L +EG IY+ P
Sbjct: 476 ALGTGI-GEEFDITKARYHKIIIMTDADVDGAHIRTLLLTFLYRYMRPLIEEGYIYIAQP 534
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++++GK V Y +++ E++++ ++ +QR+KGLGEM P QLWETT++P R
Sbjct: 535 PLYQIKQGKAVHYAFNEKEMERILGELSASPKPGLQRYKGLGEMNPTQLWETTMDPATRT 594
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ ++DA A+ VF +LMG RV+ R++ IQ A+ V NLD
Sbjct: 595 LLQVSLKDAMLADEVFETLMGDRVEPRRDFIQENAHYVKNLD 636
>gi|319952084|ref|YP_004163351.1| DNA gyrase subunit b [Cellulophaga algicola DSM 14237]
gi|319420744|gb|ADV47853.1| DNA gyrase subunit B [Cellulophaga algicola DSM 14237]
Length = 653
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 299/661 (45%), Positives = 437/661 (66%), Gaps = 27/661 (4%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
++ EA K+ Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA
Sbjct: 1 MSEEANKDEQKKNNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEA 60
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
G+ I VA+ DNSI P+D+H SAL+ V+T + AGGKF S Y
Sbjct: 61 MGGHCDTITVAINEDNSITVRDNGRGIPVDIHKKEGVSALQVVMTKIGAGGKFDKDS--Y 118
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
VSGGLHGVG+S VNALS+ L+ TV+R+G Y Q+Y +GK + V + + +GT
Sbjct: 119 KVSGGLHGVGVSCVNALSKDLKATVFRNGTIYEQEYQKGKALYP----VKSIGETEIRGT 174
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFF 290
+ F+PD+ +FT ++F+++T+A R+REL++LN ++I + R++D D + E F+
Sbjct: 175 EVTFYPDETIFTQTVEFNYDTLANRMRELSYLNKGVSITMTDKRQKDKDTPSGFHEERFY 234
Query: 291 AG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 348
+ GL+E++++L+ +++PL V+ + +GI +++A+ + + +Y++ + Y N+I T
Sbjct: 235 SEEGLKEFIKFLDGNREPLIKGVISMEGEKNGIPVEVAMVYNT-SYTENLHSYVNNINTH 293
Query: 349 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 408
+GGTH+ G + LT TL S ++ + G+ REGLT IISV+V P+FEGQT
Sbjct: 294 EGGTHLSGFRRGLTSTLKKYADASGMLEKLKFEIQGDDFREGLTAIISVKVGEPQFEGQT 353
Query: 409 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 468
KT+LGN EV V Q+V E L++YLE +P+ I+ K + A A AA +AR++V++K+
Sbjct: 354 KTKLGNREVSAAVSQAVSEMLSDYLEENPEDAKIIVQKVVLAATARHAATKAREMVQRKT 413
Query: 469 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERK 528
V+ LPGKL+DCS P E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+
Sbjct: 414 VMSIGGLPGKLSDCSDQDPVNCEVFLVEGDSAGGTAKQGRDRMFQAILPLRGKILNVEKA 473
Query: 529 DEAAMYKNEEIQNLIRALGLGVKGED----FKKEALRYHKIIILTDADVDGAHIRTLLLT 584
+++NEEI+N+ ALG+ + E+ E LRYHK++I+ DADVDG+HI TL+LT
Sbjct: 474 MRHRVFENEEIKNIYTALGVSIGTEEDSQALNLEKLRYHKVVIMCDADVDGSHIETLILT 533
Query: 585 FFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKG 644
FF+RY + L + G +Y+ PPLY V++G + +Y ++D E ++ SF N IQR+KG
Sbjct: 534 FFFRYMRELVEAGHVYIATPPLYLVKKGAKKRYAWNDKERDEIAESF--NGSVGIQRYKG 591
Query: 645 LGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNL 704
LGEM QLW+TT+NPE R L+Q+VIE+A E + VFS LMG V R+E I+ A N+
Sbjct: 592 LGEMNAEQLWDTTMNPEFRTLRQVVIENATETDRVFSMLMGDEVPPRREFIEKNAVYANI 651
Query: 705 D 705
D
Sbjct: 652 D 652
>gi|190710555|gb|ACE95108.1| gyrase subunit B [Bacillus thuringiensis serovar monterrey]
Length = 627
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/636 (50%), Positives = 430/636 (67%), Gaps = 25/636 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYI ST +GLHHLV+EI+DN++DEA AGY I V++
Sbjct: 3 SYDESQIQVLEGLEAVRKRPGMYIASTSGKGLHHLVWEIVDNSIDEALAGYCDQINVSIE 62
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
NSI P+ + + A++ ++TVLHAGGKFGG S LHGVG SV
Sbjct: 63 EYNSIRVTDNGRGIPVGIQEKMGRPAVKVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 120
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS LEV V R+G ++QKY RG PV L + D+ GT RF PD ++F
Sbjct: 121 VNALSTELEVFVHREGKIHYQKYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQE 176
Query: 247 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++ YV+ LN
Sbjct: 177 TTVYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRS 231
Query: 305 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+P+H+ V DGI ++++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR
Sbjct: 232 KQPIHEEPVYVEGSKDGIQVEVSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTR 290
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN E R + +
Sbjct: 291 VINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 351 VFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCS 410
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ + N+E++ +I
Sbjct: 411 SKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTII 470
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+
Sbjct: 471 TAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQ 529
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPL+KV++GK++QY Y++ EL+K+ + P+ IQR+KGLGEM P QLWETT++PE R
Sbjct: 530 PPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVR 589
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 590 SLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|404404168|ref|ZP_10995752.1| DNA gyrase subunit B [Alistipes sp. JC136]
Length = 652
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/646 (48%), Positives = 433/646 (67%), Gaps = 26/646 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY ++I+V +
Sbjct: 15 YSASNIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDEALAGYCTDIDVTINE 74
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P D H KSALE VLTVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 75 DNSITVKDNGRGIPTDFHEKEGKSALEVVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 132
Query: 188 NALSESLEVTVW-RDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
NALS L + RDG Y Q YS+G P T V V +GT I F PD +FT
Sbjct: 133 NALSTLLIAEIHSRDGKIYRQTYSKGAP----TSKVEVVGECSDRGTIITFKPDGSIFTH 188
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLN-TD 304
++ + +A R+RELAFLN +++ L + SD E ++F++ GL+E+V++L+ T
Sbjct: 189 TTEYKYEILANRLRELAFLNKGISLNLYDKRSDEEGKTREDHFYSEEGLKEFVKYLDATR 248
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
P+ ++ + +G+ +++A+Q+ +D++S+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 249 GTPIVEQIIYLDTEKNGVPVEVAMQY-NDSFSENVHSYVNNINTIEGGTHLTGFRRALTR 307
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL + S + ++G+ REGLT ++SV+V P+FEGQTKT+LGN EV VDQ
Sbjct: 308 TLKKYAEDSGMLAKLKFDINGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNDEVSAAVDQ 367
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ L +YLE +P +I+ K + A A AA+ AR+LV++K+VL + LPGKLADCS
Sbjct: 368 AMASALGQYLEENPKDAKAIVQKVILAATARHAARHARELVQRKTVLSGAGLPGKLADCS 427
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S +EIF VEGDSAGG+AK GRDR FQAI+PLRGKILN+E+ E M++NEEI+N+
Sbjct: 428 SRDRSIAEIFFVEGDSAGGTAKSGRDRNFQAIMPLRGKILNIEKAQEHRMWENEEIKNMF 487
Query: 544 RALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ K E LRY KIII+TDADVDG+HI TL+LTFF+R K L + G +
Sbjct: 488 TALGVTIGTEEDSKALNLEKLRYDKIIIMTDADVDGSHIATLMLTFFFRKMKELIENGHV 547
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
Y+ PPLY V++GKQ +YC+ + E ++ + F + +QR+KGLGEM QLWETT+N
Sbjct: 548 YIATPPLYLVKKGKQERYCWTEKERDEITAEFGKGS--HVQRYKGLGEMNAHQLWETTMN 605
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P+ R+L+Q+ IE+AAEA+ +FS LMG V R+E I+ A+ N+D
Sbjct: 606 PDTRILRQVNIENAAEADRIFSMLMGDEVPPRREFIEKNAHYANID 651
>gi|389847084|ref|YP_006349323.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
gi|448614967|ref|ZP_21663995.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
gi|388244390|gb|AFK19336.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
gi|445753054|gb|EMA04473.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
Length = 639
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/635 (50%), Positives = 430/635 (67%), Gaps = 22/635 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVALHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ LEV V RDG + ++ G+P V ++ + GT IRFWP+ ++F T
Sbjct: 125 NALSQKLEVEVKRDGAVWTHRFEHGEPKPDQFERVRDLEPGEDTGTTIRFWPEGEIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+FD T+ R+RELAFLN + I L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEITLTDERTD----KSSTFLFEGGIREFVEYLNETKTA 239
Query: 308 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDLIYYEDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSEGMLSDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 359 HEQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQTR 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P ESE+F+VEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ + +N E++ LI A
Sbjct: 419 DPTESELFVVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKHRLDRILENNEVRALITA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
+G G+ G++F E RY +II++TDADVDGAHIRTLLLT YR+ + L + G +Y PP
Sbjct: 479 IGAGI-GDEFDIEKARYQRIILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPP 537
Query: 606 LYKVE-RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LY+V RG ++ + ++ N +QRFKGLGEM P QLWETT+NPE R+
Sbjct: 538 LYRVRYRGNTYDVMTEEERDRIIEEKCNGNPT-QVQRFKGLGEMNPDQLWETTMNPENRV 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
LK++ +EDAA A+ +F+ LMG V RK+ I++ A
Sbjct: 597 LKRITVEDAAAADRMFNILMGDAVGPRKQFIKDHA 631
>gi|170756292|ref|YP_001779632.1| DNA gyrase subunit B [Clostridium botulinum B1 str. Okra]
gi|429247632|ref|ZP_19210871.1| DNA gyrase subunit B [Clostridium botulinum CFSAN001628]
gi|169121504|gb|ACA45340.1| DNA gyrase, B subunit [Clostridium botulinum B1 str. Okra]
gi|428755345|gb|EKX77977.1| DNA gyrase subunit B [Clostridium botulinum CFSAN001628]
Length = 637
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 446/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+G + QK+ RG T L V + GT+I F PD ++F
Sbjct: 125 VVNALSEQCEVEVRREGHIWKQKFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + ++ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDENKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDIDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNGEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + + +LE +P+V I+ K LSA +A AAKRAR+L R+KS+L S+SLPGKL+DCSS
Sbjct: 355 VGQSIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSILESTSLPGKLSDCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F + +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + +IQR+KGLGEM P QLWETT++PE R
Sbjct: 534 PLYRIYKAKKETYVYSDPELDAALLELGGKDTNTNIQRYKGLGEMNPEQLWETTMDPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA EA+ +F+ LMG +V+ R++ I+ NA +VNLD
Sbjct: 594 TLLQVTVEDAMEADEIFTILMGTKVEPRRDFIESNADKVVNLD 636
>gi|406025870|ref|YP_006724702.1| DNA gyrase subunit B [Lactobacillus buchneri CD034]
gi|405124359|gb|AFR99119.1| DNA gyrase subunit B [Lactobacillus buchneri CD034]
Length = 647
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/654 (49%), Positives = 434/654 (66%), Gaps = 19/654 (2%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A E + ++ Y + QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN +DEA
Sbjct: 1 MADEKETKKELAHEYDASQIQVLEGLEAVRKRPGMYIGTTSSQGLHHLVWEIVDNGIDEA 60
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AG+A+ I V + DNSI P+D+ T K ALETV T+LHAGGKFGG
Sbjct: 61 LAGFATKITVTVEKDNSITVTDDGRGIPVDIQKKTGKPALETVFTILHAGGKFGGGGYKV 120
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
S LHGVG SVVNALS L+V V RDG Y+ +SRG T + V+ S D GT
Sbjct: 121 SGG--LHGVGASVVNALSSELDVEVTRDGKVYYMDFSRGHVKTKM--KVVREVSDDLHGT 176
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
++ F PD +F +D + R+RELAFLN L I +R D PEK ++ + GG
Sbjct: 177 KVHFLPDPDIFRETTTYDIKVLTARLRELAFLNKGLRIVVR--DLRPEKPTEQDFMYEGG 234
Query: 294 LEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
++ YV++L+ K+ L D + + V +GIT+++A+Q+ +D Y +T++ + N+I T +GGT
Sbjct: 235 IKHYVEYLDNSKETLLDEPIYVEGVMNGITVEVAIQYTND-YHNTLMTFTNNIHTYEGGT 293
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H EG K +LTR +N +K+K +KD + +LSGE VREG T ++S++ P+P+FEGQTKT+L
Sbjct: 294 HEEGFKRALTRVINDYARKNKLLKDNEPNLSGEDVREGTTAVVSIKHPDPQFEGQTKTKL 353
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN + R V D+ ++ T++L +P + I+ + + A KA AAKRAR++ R+KS L
Sbjct: 354 GNSDARTVTDRIFSDHFTKFLMENPKMARKIVDRGMLASKARSAAKRAREVTRKKSGLEI 413
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLAD +S P+ SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+
Sbjct: 414 SNLPGKLADNTSKDPKISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR 473
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+ NEEI++L A+G G GEDF + YHK+II+TDADVDGAHI+TLLLT YRY +
Sbjct: 474 ILANEEIRSLFTAMGTGF-GEDFDLSKINYHKLIIMTDADVDGAHIQTLLLTLIYRYMRP 532
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L D G +YV PPLY+V +GK +Y D +L + + IQR+KGLGEM Q
Sbjct: 533 LIDAGFVYVAQPPLYQVRQGKMSRYIDSDDDLNAFLGTLQPSPKPVIQRYKGLGEMDAEQ 592
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
LW+TT+NPE R L ++ DAAEA+ VFS LMG +V+ R+E I++ A V NLD
Sbjct: 593 LWDTTMNPENRHLLRVESSDAAEADKVFSMLMGDKVEPRREFIEDNATFVENLD 646
>gi|148378017|ref|YP_001252558.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 3502]
gi|153931278|ref|YP_001382416.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 19397]
gi|153936801|ref|YP_001385968.1| DNA gyrase subunit B [Clostridium botulinum A str. Hall]
gi|387816243|ref|YP_005676587.1| DNA gyrase subunit B [Clostridium botulinum H04402 065]
gi|148287501|emb|CAL81560.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 3502]
gi|152927322|gb|ABS32822.1| DNA gyrase, B subunit [Clostridium botulinum A str. ATCC 19397]
gi|152932715|gb|ABS38214.1| DNA gyrase, B subunit [Clostridium botulinum A str. Hall]
gi|322804284|emb|CBZ01834.1| DNA gyrase subunit B [Clostridium botulinum H04402 065]
Length = 637
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 446/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+G + QK+ RG T L V + GT+I F PD ++F
Sbjct: 125 VVNALSEQCEVEVRREGHIWKQKFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + ++ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDENKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNGEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + + +LE +P+V I+ K LSA +A AAKRAR+L R+KS+L S+SLPGKL+DCSS
Sbjct: 355 VGQSIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSILESTSLPGKLSDCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F + +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + +IQR+KGLGEM P QLWETT++PE R
Sbjct: 534 PLYRIYKAKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLGEMNPEQLWETTMDPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA EA+ +F+ LMG +V+ R++ I+ NA +VNLD
Sbjct: 594 TLLQVTVEDAMEADEIFTILMGTKVEPRRDFIESNADKVVNLD 636
>gi|359406618|ref|ZP_09199293.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
gi|357555419|gb|EHJ37072.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
Length = 657
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/655 (48%), Positives = 431/655 (65%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D SI P+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDESITVQDNGRGIPVDMHAKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS ++ V+RDG Y Q+Y +GKP+ + V D++GTR +FWPD VFTT
Sbjct: 128 VNALSTRMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKRGTRQQFWPDPTVFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
+ + IA R+RELAFLN + I LR + E E F A GL+E+V++++ +
Sbjct: 184 T-HYQWDIIARRMRELAFLNAGIRITLRDMRPNEEGKTREEVFHAKDGLKEFVRYVDRHR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRT
Sbjct: 243 THLFDDVIYLKTEKQGIPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRT 301
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKTYADNDPAISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGA 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E LT YLE +P I K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 362 VQQAVGEALTNYLEENPKEAKMICDKVILAATARIAARKARESVQRKNPMTGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ ++++E +
Sbjct: 422 DCSNRDPKKCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVMWHKVFESESVM 481
Query: 541 NLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+GED K+ + LRY KIII+TDADVDG+HI TL++T FYR+ +
Sbjct: 482 NIIQSIGVRFGVEGEDDKEANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIQ 541
Query: 596 EGCIYVGVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
EG +Y+ PPLY + K +YCY D + L K QR+KGLGEM
Sbjct: 542 EGHLYIANPPLYLCTYKNKVKEYCYTDQQRQAFLDKYAGGVDDGKSIHTQRYKGLGEMNA 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P+ R+L+Q+ IE+AAEA+ +FS LMG V+ R++ I+ A N+D
Sbjct: 602 EQLWETTMDPKTRLLRQVTIENAAEADEIFSMLMGDDVEPRRKFIEEHATYANID 656
>gi|24212705|ref|NP_710186.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45655919|ref|YP_000005.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|386072493|ref|YP_005986810.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|417761365|ref|ZP_12409377.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|417776551|ref|ZP_12424387.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|417784799|ref|ZP_12432504.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|418670039|ref|ZP_13231413.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418672460|ref|ZP_13233799.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|418707603|ref|ZP_13268423.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418730771|ref|ZP_13289247.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|421087509|ref|ZP_15548345.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|421104639|ref|ZP_15565234.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421123297|ref|ZP_15583579.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|24193336|gb|AAN47204.1|AE011192_5 DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45599152|gb|AAS68642.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|321401260|gb|ADW83041.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401264|gb|ADW83043.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401268|gb|ADW83045.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401272|gb|ADW83047.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401278|gb|ADW83050.1| DNA gyrase subunit B [Leptospira interrogans]
gi|353456282|gb|AER00827.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|409942779|gb|EKN88384.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|409951588|gb|EKO06102.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|410344041|gb|EKO95236.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|410366091|gb|EKP21484.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429758|gb|EKP74133.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|410573693|gb|EKQ36739.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|410580588|gb|EKQ48410.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|410754329|gb|EKR15984.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410772024|gb|EKR47218.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774333|gb|EKR54341.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|455790085|gb|EMF41975.1| DNA gyrase, B subunit [Leptospira interrogans serovar Lora str. TE
1992]
gi|456824447|gb|EMF72884.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456971873|gb|EMG12397.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
gi|456985971|gb|EMG21650.1| DNA gyrase, B subunit [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 639
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/641 (47%), Positives = 431/641 (67%), Gaps = 20/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G Y QKY +G PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE+++VEGDSAGGSAKQGRDR QAILPL+GKILNVE+ + +EEI+ L+ A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ ++F + +RYHKI+I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PP
Sbjct: 479 LGTGIGEDEFNIDKIRYHKIMIMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY ++ GK Y Y D E +++ + + + IQR+KGLGEM P QLWETT++P R++
Sbjct: 539 LYLIKHGKNSTYVYSDKEKEELLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVV 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ ++D EA F+ LMG V RK+ I+ NAA + NLD
Sbjct: 598 LKVKLDDFVEAEETFNVLMGDEVQPRKQFIEVNAAKVANLD 638
>gi|73747960|ref|YP_307199.1| DNA gyrase subunit B [Dehalococcoides sp. CBDB1]
gi|147668656|ref|YP_001213474.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452202849|ref|YP_007482982.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452204330|ref|YP_007484459.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
gi|73659676|emb|CAI82283.1| DNA gyrase, subunit B [Dehalococcoides sp. CBDB1]
gi|146269604|gb|ABQ16596.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452109908|gb|AGG05640.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452111386|gb|AGG07117.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
Length = 642
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 426/643 (66%), Gaps = 25/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+TY + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 SETYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D+H T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 MFKDGSVSVEDNGRGIPVDIHSTTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALSE V V R+G Y Q Y RGKP T L V + GT F D Q+F
Sbjct: 131 SVVNALSEWTTVKVRRNGKIYQQSYLRGKPSTPLE----EVGVSEGSGTTTIFMADSQIF 186
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+T ++D T+ R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFETLTDRLREIAYLNKGLEVYIYDEKSDQERT----YYFEGGITGFVRHLNRN 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ H + K D +++A+Q+ +D YSD+ L +AN + T+DGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTVDGGTHLTGFRSALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
E+F+VEGDSAGGSAKQGR+RRFQAILPLRGKILNVE+ M +EEI+ +I
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAII 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
AL G+ DF LRY++++++TDADVDG+HIRTLLLTFF+R+ L E +++
Sbjct: 481 TALAAGID-NDFDPSKLRYNRLVLMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK++ G + Y+DAE + + + S + IQR+KGLGEM QLW TT++P R
Sbjct: 540 PPLYKIKIGSTEHWVYNDAEKEAILAQTKSTKV-DIQRYKGLGEMSAEQLWRTTMDPASR 598
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ +EDAA+A+ +F+ LMG V RK IQ+ + V NLD
Sbjct: 599 TLLEVKVEDAAKADQIFNLLMGGEVAPRKAFIQSHSRTVKNLD 641
>gi|270307455|ref|YP_003329513.1| DNA gyrase subunit B [Dehalococcoides sp. VS]
gi|270153347|gb|ACZ61185.1| DNA gyrase, B subunit [Dehalococcoides sp. VS]
Length = 642
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 425/643 (66%), Gaps = 25/643 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ Y + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 SENYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ D S IP+D+HP T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 MFKDGSVSVEDNGRGIPVDIHPVTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNAL+E V V R+G Y Q Y RGKP T L + D GT F D Q+F
Sbjct: 131 SVVNALAEWTTVKVRRNGKIYQQSYQRGKPSTPLE----EIGVSDGSGTTTIFKADSQIF 186
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
+T ++D + R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFEILTDRLREIAYLNKGLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRN 241
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
++ H + K D +++A+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTR 300
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
E+F+VEGDSAGGSAKQGR+RRFQAILPLRGKILNVE+ M +EEI+ +I
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAII 480
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
AL G+ DF LRY++++++TDADVDG+HIRTLLLTFF+R+ L E +++
Sbjct: 481 TALAAGID-NDFDPAKLRYNRLVLMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQ 539
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLYK++ G + Y+DAE + + S S + IQR+KGLGEM QLW TT++P R
Sbjct: 540 PPLYKIKIGSTEHWVYNDAEKETLLSQTKSTKV-DIQRYKGLGEMSAEQLWRTTMDPASR 598
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ +EDAA+A+ +F+ LMG V RK IQ+ + V NLD
Sbjct: 599 TLLEVKVEDAAKADQIFNLLMGGEVAPRKAFIQSHSRTVKNLD 641
>gi|431753187|ref|ZP_19541864.1| DNA gyrase subunit B [Enterococcus faecium E2620]
gi|430612692|gb|ELB49727.1| DNA gyrase subunit B [Enterococcus faecium E2620]
Length = 648
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/647 (49%), Positives = 438/647 (67%), Gaps = 25/647 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVI 70
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V+++G Y+Q+Y RG V L ++ D GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDCHGTTVHFTPDPEIF 184
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV++LN +
Sbjct: 185 TETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYDGGIKSYVEYLNAN 242
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NEEI++L
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF 481
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G +Y+
Sbjct: 482 TAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ 540
Query: 604 PPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QLWETT++
Sbjct: 541 PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD 600
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 601 PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|257054095|ref|YP_003131927.1| DNA gyrase subunit B [Saccharomonospora viridis DSM 43017]
gi|256583967|gb|ACU95100.1| DNA gyrase subunit B [Saccharomonospora viridis DSM 43017]
Length = 654
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/658 (47%), Positives = 441/658 (67%), Gaps = 41/658 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL+ E++DN+VDEA AGYAS +EV LLA
Sbjct: 8 YSASSITVLEGLEAVRKRPGMYIGSTGVRGLHHLIQEVVDNSVDEAMAGYASRVEVTLLA 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D IP++ HP K +E VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVEPHPVHGKPTVEIVLTQLHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS +LEV + RDG + Q+Y P ++ DR GT + FW D ++F T
Sbjct: 126 NALSSALEVEIHRDGRIWAQRYENSVP-----GELVDKGPTDRSGTSVTFWADPEIFETT 180
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKE--------DSDPEKNQYNE--YFFAGGLEEY 297
+++ T+A R++E+AFLN LT+ LR E D+ E+ Q E Y++ GGLE++
Sbjct: 181 -EYNAETVARRLQEMAFLNKGLTMILRDERVTDEEGEDATGERAQLKERTYYYPGGLEDF 239
Query: 298 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V+++N ++ +H V+ F + DG+ +++A+QW +D Y+ ++ +AN+I T +GGTH EG
Sbjct: 240 VKYINASREAIHPSVISFEQKGDGLEVEVAMQW-NDGYTPSVYTFANTINTHEGGTHEEG 298
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+A+LTR +N+ + K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN E
Sbjct: 299 FRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSIKLTEPQFEGQTKTKLGNSE 358
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
R V + E+L ++ E +P I++K++S+ +A LAA++ARDLVR+K + LP
Sbjct: 359 ARSFVQTACNEWLADWFERNPTEAKLIINKAVSSAQARLAARKARDLVRRKGAMDIGGLP 418
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKL DC S PEE E++IVEGDSAGGSAK+GRD RFQAILP+RGKI+NVE+ + KN
Sbjct: 419 GKLKDCRSNDPEECELYIVEGDSAGGSAKEGRDSRFQAILPIRGKIINVEKARIDKVLKN 478
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+E+Q+LI ALG G+ +DF LRYHKI+I+ DADVDG HIRTLLLT +R+ + L ++
Sbjct: 479 QEVQSLITALGTGIH-DDFDISKLRYHKIVIMADADVDGQHIRTLLLTLLFRFMRPLVEQ 537
Query: 597 GCIYVGVPPLYKVERGK-QVQYCYDDAELK-------KVKSSFPSNALYSIQRFKGLGEM 648
G +Y+ PPLYK++ + + QY Y D E + P + IQR+KGLGEM
Sbjct: 538 GHVYLAQPPLYKIKWPRMEPQYAYSDRERDGLLRAGAEAGRKLPKDD--GIQRYKGLGEM 595
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
+LWETT++P R+L Q+ ++DAA+A+ +FS LMG V+ R+ I +NA + LD
Sbjct: 596 NAEELWETTMDPSNRVLLQVTLDDAAQADELFSVLMGEDVEARRSFITRNAKGVQFLD 653
>gi|372324358|ref|ZP_09518947.1| DNA gyrase subunit B [Oenococcus kitaharae DSM 17330]
gi|366983166|gb|EHN58565.1| DNA gyrase subunit B [Oenococcus kitaharae DSM 17330]
Length = 652
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/641 (47%), Positives = 422/641 (65%), Gaps = 20/641 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNAYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ DNSI P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITVTDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKNYKVSGGLHGVGA 132
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS+ ++V V+RDG Y+ + RG T + P+ + +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDGKIYYMDFQRGHIQTEMKLLDEPM--RLERGTIVHFAPDPDIF 190
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
FD+NT+A RIRELAFLN L +++ +PEK + + + GG+ EYV++LN +
Sbjct: 191 RETTTFDYNTLASRIRELAFLNKGLRLSITDRRVEPEKKE--SFMYEGGIAEYVKFLNKN 248
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+PL + V + +GI +++ALQ+ +DA ++T++ + N+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTR 307
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK +KD D L+GE VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+
Sbjct: 308 IINDYAKKKGILKDSDDPLTGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNH 367
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
++ +P+ +I +K + A KA +AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGIIASKARVAAKKARDLTRRKSGLEISALAGKLADNT 427
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P+ SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NEEI++L
Sbjct: 428 SKDPDISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKATLDKVLANEEIRSLF 487
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
A+G G G++F YHK+II+TDADVDGAHIRTLLLT F+R+ + L D G IY+
Sbjct: 488 TAMGTGF-GDEFDISKAHYHKVIIMTDADVDGAHIRTLLLTLFFRHMRPLIDAGYIYIAQ 546
Query: 604 PPLYKVERGKQVQYCY--DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY V G Q Y D EL + ++ P++ IQR+KGLGEM QLW+TT++P+
Sbjct: 547 PPLYGVAIGNSDQRVYLDSDEELDRYIATLPASPKPRIQRYKGLGEMDAEQLWDTTMDPK 606
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
R L ++ + E + F LMG RV+ R+E I++ A V
Sbjct: 607 HRRLLRVSPDYQPEVDTTFDMLMGDRVEPRREFIEDNAQFV 647
>gi|288800604|ref|ZP_06406062.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039]
gi|288332817|gb|EFC71297.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039]
Length = 657
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/659 (47%), Positives = 438/659 (66%), Gaps = 35/659 (5%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV
Sbjct: 7 IENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEV 66
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG
Sbjct: 67 TINEDNSITVQDNGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVG 124
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+S VNALS ++ V+RDG Y Q+Y +GKP+ ++ V + +GTR +FWPD +
Sbjct: 125 VSCVNALSTHMKSQVFRDGKIYQQEYEQGKPLYSVKV----VGETNLRGTRQQFWPDPSI 180
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLN 302
FTT + + + I+ R+RELA+LN + I L D E E F+A GL+ + ++++
Sbjct: 181 FTTTL-YKWDIISRRMRELAYLNAGVRITLTDLRLDEEGKIRREEFYAQDGLKAFARYID 239
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ L DV+ + + + + I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +L
Sbjct: 240 RHRTHLFDDVIYLKTEKNNVPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMAL 298
Query: 362 TRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 417
TRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 TRTLKAYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEV 358
Query: 418 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 477
V Q+V E L +YLE HP I K + A A +AA++AR+ V++K+ + LPG
Sbjct: 359 SGAVQQAVGEALADYLEEHPKEAKLICDKVILAATARIAARKARESVQRKNPMTGGGLPG 418
Query: 478 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 537
KLADCS+ P+ SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ ++++E
Sbjct: 419 KLADCSNKDPKTSEIFLVEGDSAGGSAKQGRDRYCQAILPLRGKILNVEKVMWHKVFESE 478
Query: 538 EIQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+ N+I+++G+ GV+GED K+ + LRY KIII+TDADVDG+HI TL++T FYR+
Sbjct: 479 SVMNIIQSIGVRFGVEGEDDKEANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPK 538
Query: 593 LFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLG 646
+ EG +Y+ PPLY + K+ +YCY + + + + S +++ +QR+KGLG
Sbjct: 539 VIQEGHLYIATPPLYLCSYKNKEKEYCYTEQQRQAFIDRHTEGKDDSKSIH-VQRYKGLG 597
Query: 647 EMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
EM P QLWETT+NP+ R+LKQ+ IE+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 598 EMNPEQLWETTMNPQTRLLKQVTIENAAEADEIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|295103719|emb|CBL01263.1| DNA gyrase subunit B [Faecalibacterium prausnitzii SL3/3]
Length = 664
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/671 (47%), Positives = 428/671 (63%), Gaps = 32/671 (4%)
Query: 59 LSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNA 118
++ I T + Y + +IQVL+GLEAVRKRP MYIGSTG RGLHHLVYEI+DNA
Sbjct: 1 MAEEIITSTNADTATDHEYNASEIQVLKGLEAVRKRPGMYIGSTGERGLHHLVYEIVDNA 60
Query: 119 VDEAQAGYASNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGS 169
+DEA AGY +IEV +L DN IP+D+ T A+ V T+LHAGGKFGG
Sbjct: 61 IDEALAGYCDHIEVKILKDNIIQVTDNGRGIPVDIQADTGLPAVTVVYTILHAGGKFGGE 120
Query: 170 SSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD 229
+SGY V+GGLHGVG SVVNA SE L V V RDG EY Q + RG P L C + ++
Sbjct: 121 NSGYKVAGGLHGVGASVVNACSEWLTVNVRRDGKEYEQTFRRGDPDGALKC--IGTVAEG 178
Query: 230 RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE------------D 277
GTR+ F PD ++F +D +T+ R+RE +FLN + I L E +
Sbjct: 179 VTGTRVTFKPDPEMFKDTTVYDFDTLEKRLREESFLNAGVKITLTDERQLYTPVLEDGQE 238
Query: 278 SDPEKNQYNEYFFAGGLEEYVQWLNTDKK--PLH-DVVGFRKDVDGITIDLALQWCSDAY 334
DP + + GG++ +V +L +K LH +V+ + D ++ALQ+ S +Y
Sbjct: 239 GDP-CYRSEVMCYEGGIKSFVTYLGEKRKLEVLHPNVIYLKGQTDRGVAEIALQYNS-SY 296
Query: 335 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 394
++ +L +AN++ T DGGTH EG KASLTR N G+ +KDKD +LSG VREGL C+
Sbjct: 297 NELLLSFANNVNTPDGGTHEEGFKASLTRVFNDYGRSHGLLKDKDENLSGADVREGLICV 356
Query: 395 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 454
ISV++ EFEGQTK +LGN E+R +V V L E+ E +P V +I K+ A +A
Sbjct: 357 ISVKLQEAEFEGQTKAKLGNTEIRTLVSNMVYSKLMEFFEENPGVAKAIFEKATQAARAR 416
Query: 455 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 514
AAK+AR+LVR+KS L +S +PGKLADC P +EIFIVEGDSAGGSAK GRD QA
Sbjct: 417 AAAKKARELVRRKSALETSRMPGKLADCREKDPSRTEIFIVEGDSAGGSAKMGRDSAIQA 476
Query: 515 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 574
ILPL GK+LNVE+ +Y N+++ ++ ALG G+ G++F LRY K+ I+ DADVD
Sbjct: 477 ILPLWGKMLNVEKARADKIYGNDKLMPVVLALGCGI-GDEFDISKLRYDKVFIMADADVD 535
Query: 575 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 634
G+HI TL+LTFF+RY + L ++G +YV PPL+KV++G ++Y Y+DAE+ + P
Sbjct: 536 GSHICTLMLTFFFRYMRPLIEQGHVYVAQPPLFKVQKGNTIKYAYNDAEMAILSQEMPGA 595
Query: 635 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 694
+ R+KGLGEM P QLWETT+NP+ R++ Q+ IEDA +A+ F+ LMG +V+ R+
Sbjct: 596 ---KVNRYKGLGEMNPEQLWETTMNPDNRVIVQITIEDAEKADEAFTILMGDQVEPRRRF 652
Query: 695 IQNAANLVNLD 705
I+ A LD
Sbjct: 653 IETNAQYAKLD 663
>gi|418699886|ref|ZP_13260835.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
gi|321401274|gb|ADW83048.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401276|gb|ADW83049.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401280|gb|ADW83051.1| DNA gyrase subunit B [Leptospira interrogans]
gi|410761007|gb|EKR27196.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 639
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/641 (47%), Positives = 431/641 (67%), Gaps = 20/641 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE LEV V + G Y QKY +G PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 307 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 367 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
P SE+++VEGDSAGGSAKQGRDR QAILPL+GKILNVE+ + +EEI+ L+ A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSA 478
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
LG G+ ++F + +RYHKI+I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PP
Sbjct: 479 LGTGIGEDEFNIDKIRYHKIMIMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPP 538
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
LY ++ GK Y Y D E +++ + + + IQR+KGLGEM P QLWETT++P R++
Sbjct: 539 LYLIKHGKNSTYVYSDKEKEELLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVV 597
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
++ ++D EA F+ LMG V RK+ I+ NAA + NLD
Sbjct: 598 LKVKLDDFVEAEETFNILMGDEVQPRKQFIEVNAAKVANLD 638
>gi|422882008|ref|ZP_16928464.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK355]
gi|332362817|gb|EGJ40611.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK355]
Length = 649
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/657 (47%), Positives = 443/657 (67%), Gaps = 26/657 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+AS+I+V + DNSI P+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
LHGVG SVVNALS L+V V+++G ++Q+YSRG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYSRGQVVADLEI----IGETDRTGTTV 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 296 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ +
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKIL 472
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI++L A+G G G DF RY K++I+TDADVDGAHIRTLLLT YRY K +
Sbjct: 473 ANEEIRSLFTAMGTGF-GADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLIYRYMKPVL 531
Query: 595 DEGCIYVGVPPLYKVERGKQVQY-----CYDDAELKKVKSSFPSN-ALYSIQRFKGLGEM 648
+ G +Y+ PP+Y V+ G +V+ + EL+ + + + +IQR+KGLGEM
Sbjct: 532 EAGFVYIAQPPIYGVKVGSEVKEYIQPGANQEEELQAALARYSEGRSKPTIQRYKGLGEM 591
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NPE R++ ++ ++DAAEA+ +F LMG RV+ R+E I+ A LD
Sbjct: 592 DDHQLWETTMNPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLD 648
>gi|323343849|ref|ZP_08084076.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
gi|323095668|gb|EFZ38242.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
Length = 672
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/656 (47%), Positives = 437/656 (66%), Gaps = 35/656 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV +
Sbjct: 25 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTIN 84
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
D SI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 85 EDESITVQDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 142
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y +GKP+ + + + D++GTR +FWPDK +FTT
Sbjct: 143 VNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----MGTTDKRGTRQQFWPDKTIFTT 198
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
I + + IA R+RELA+LN + I L ++ E E F A GL+E+V++++ +
Sbjct: 199 -IHYQWDIIARRMRELAYLNAGIKITLTDLRANEEGKPRVEVFHAKDGLKEFVRYVDRHR 257
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 258 THLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLSGFRTALTRV 316
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 317 LKAYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 376
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E LT YLE HP I K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 377 VQQAVGEALTNYLEEHPAEAKKICEKVVLAATARIAARKARESVQRKNFMSGGGLPGKLA 436
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ +++ E +
Sbjct: 437 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVM 496
Query: 541 NLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+GED ++ + LRY KIII+TDADVDG+HI TL++T FYR+ + +
Sbjct: 497 NIIQSIGVRFGVEGEDDREANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIE 556
Query: 596 EGCIYVGVPPLYKVE-RGKQVQYCYDDAELKKVKSSFP-----SNALYSIQRFKGLGEMM 649
+G +Y+ PPLYK + K +YCY + + + + + ++++ QR+KGLGEM
Sbjct: 557 DGHLYIANPPLYKCSYKNKVSEYCYTEQQRQAFFDKYANGDEDAKSIHT-QRYKGLGEMN 615
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
P QLWETT++P+ R+LKQ+ IE+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 616 PDQLWETTMDPKSRLLKQVNIENAAEADEIFSMLMGDDVEPRREFIEQNATYANID 671
>gi|409100724|ref|ZP_11220748.1| DNA gyrase subunit B [Pedobacter agri PB92]
Length = 652
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/657 (48%), Positives = 443/657 (67%), Gaps = 28/657 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E + Y ++ IQVLEGLEAVRKRP+MYIG TG +GLHHLVYE++DN++DEA AG+A
Sbjct: 3 EEQDLKSNYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEALAGHAD 62
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
I+V +L NSI P ++ NKSALE V+TVLHAGGKF + Y VSGGL
Sbjct: 63 TIDVRILEGNSIRVEDNGRGIPTGINKKENKSALEIVMTVLHAGGKFDKDT--YKVSGGL 120
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALS L+ V R+G + Q+Y+ GKP+ V D++GT + F P
Sbjct: 121 HGVGVSCVNALSTHLKAEVHREGKIWMQEYNIGKPL----YDVKETGVTDKRGTIVTFSP 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEY 297
D +FT ++ ++T+AGR+RELAFLN +T+ L E E + +E F + GGL E+
Sbjct: 177 DATIFTQTTEYKYDTLAGRLRELAFLNKGITLTLTDEREVLEDGSFLSEVFHSEGGLREF 236
Query: 298 VQWLN-TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V++L+ T L D V +GI ++LA Q+ +D+YS+ + Y N+I T +GGTHI G
Sbjct: 237 VKFLDGTRASFLPDPVYIEGIKNGIPVELAFQY-NDSYSENVHSYVNNINTHEGGTHIAG 295
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ LTRTL + KS +K+ + ++G+ REGLT ++SV+V P+FEGQTKT+LGN E
Sbjct: 296 FRRGLTRTLKAYADKSGLLKNLKMEITGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNSE 355
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
V VD +V E L YLE +P I++K + A A AA++AR++V++KSV+ S LP
Sbjct: 356 VMGAVDVAVGEALGIYLEENPKEAKMIINKVILAATARAAARKAREMVQRKSVMGGSGLP 415
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKLADCS + PE+ EI++VEGDSAGG+AKQGRDR QAILPL+GKILNVE+ E +Y+N
Sbjct: 416 GKLADCSDSDPEKCEIYLVEGDSAGGTAKQGRDRNIQAILPLKGKILNVEKAMEHKIYEN 475
Query: 537 EEIQNLIRALGLGVKG-EDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+EI+N+ A+G+ + ED K LRYHKI+I+TDAD+DG+HI TL+LTFFYRY +
Sbjct: 476 DEIKNMFTAIGVSIGTPEDDKALNLTKLRYHKIVIMTDADIDGSHITTLILTFFYRYMRA 535
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEM 648
L + G +Y+ PPLY+V++GK+ +YC++ DA ++++K + ++++ IQR+KGLGEM
Sbjct: 536 LIEAGYVYIASPPLYQVKKGKEFEYCWNDVQRDAAVQRLKGAGKEDSVH-IQRYKGLGEM 594
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW+TTLNP R L Q IE AAE + FS LMG V R+E I+ A +D
Sbjct: 595 NAEQLWDTTLNPATRTLLQATIESAAECDHTFSMLMGDEVAPRREFIERNAKYAKID 651
>gi|210614352|ref|ZP_03290171.1| hypothetical protein CLONEX_02385 [Clostridium nexile DSM 1787]
gi|210150696|gb|EEA81705.1| hypothetical protein CLONEX_02385 [Clostridium nexile DSM 1787]
Length = 638
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 329/651 (50%), Positives = 433/651 (66%), Gaps = 27/651 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY I V
Sbjct: 1 MSAEYGADQIQILEGLEAVRKRPGMYIGSTSIRGLHHLVYEIVDNAVDEALAGYCDTIFV 60
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
++ DNSI P+ ++ A+E V TVLHAGGKFGG S LHGVG
Sbjct: 61 SINEDNSITVIDNGRGIPVGINHKAGLPAVEVVFTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ--GTRIRFWPDK 241
SVVNALSE LEV ++ +G Y Q+Y RGK V L +D D Q GT++ F PDK
Sbjct: 119 ASVVNALSEWLEVEIYNEGKVYKQRYERGKVVYKLKV----IDECDAQKTGTKVTFLPDK 174
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
++F + FD++T+ R RE+AFL L I L+ D PE+ + + GG++E+VQ+L
Sbjct: 175 EIFEETV-FDYDTLKQRFREMAFLTKNLKIVLK--DERPEEPIEKTFHYEGGIKEFVQYL 231
Query: 302 NTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
N K PL++ ++ + DG+ +++A+Q +D+YSD G+ N+I T +GGTH+ G + +
Sbjct: 232 NKSKTPLYEQIIYCEGEKDGVAVEVAMQH-NDSYSDNTYGFVNNITTPEGGTHVVGFRNA 290
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LT+T N +K+K +KD + +LSGE +REGLT IISV++ +P+FEGQTK +LGN E R
Sbjct: 291 LTKTFNEYARKNKLLKDNEPNLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARGA 350
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
VD V L +LE +P+V + KS+ A +A AA++ARDL R+KS L SLPGKLA
Sbjct: 351 VDNIVSTQLEIFLEQNPNVAKMTVEKSVMAQRAREAARKARDLTRRKSALEGMSLPGKLA 410
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P EI+IVEGDSAGGSAK RDR QAILPLRGKILNVE+ +Y N EI+
Sbjct: 411 DCSDKDPANCEIYIVEGDSAGGSAKTARDRATQAILPLRGKILNVEKARLDKIYANAEIK 470
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+I A G G+ EDF LRYHKIII+TDADVDGAHI TLLLTF YR+ L EG +Y
Sbjct: 471 AMITAFGTGIH-EDFDISKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPELIKEGYVY 529
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
+ PPLYK+E+ K+V Y Y D EL K+ + IQR+KGLGEM QLWETT++P
Sbjct: 530 LAQPPLYKLEKNKKVWYAYSDEELNKILLEVGRDGNNKIQRYKGLGEMDAEQLWETTMDP 589
Query: 661 EQRMLKQLVI--EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
E R+L ++ + E +E ++ F++LMG +V+ R+E I+ A VN +LDI
Sbjct: 590 EHRILLRVTMDEESTSELDLTFTTLMGDKVEPRREFIEENAKYVN--NLDI 638
>gi|399927980|ref|ZP_10785338.1| DNA gyrase subunit B [Myroides injenensis M09-0166]
Length = 646
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/649 (46%), Positives = 429/649 (66%), Gaps = 33/649 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 10 YSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTINVIINE 69
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D+H SALE V+T + AGGKF S Y VSGGLHGVG+S V
Sbjct: 70 DNSVTVQDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS+ L+ TV+RDG Y Q+YS+GK + + V D++GT++ F PD +FT
Sbjct: 128 NALSDLLKATVFRDGKIYEQEYSQGKALYPVKV----VGETDKKGTQVTFHPDPTIFTQV 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR-----KEDSDPEKNQYNEYFFA-GGLEEYVQWL 301
+F + T+AGR+RELAFLN LTI L ED P+ +E FF+ GL+E++++L
Sbjct: 184 TEFSYETLAGRLRELAFLNKGLTITLTDLREINEDGTPK----SEVFFSKDGLKEFIKFL 239
Query: 302 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
+ ++ P+ DV+ D + +++AL + +D YS+ + Y N+I T +GGTH++G +
Sbjct: 240 DGNRVPIIGDVISMETDKGEVPVEVALIY-NDTYSENIYSYVNNINTHEGGTHLQGFRMG 298
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTRTL S ++ ++G+ REGLT IISV+V P+FEGQTKT+LGN EV
Sbjct: 299 LTRTLKKYADASGLLEKLKFEITGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSP 358
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L YLE HP+ I+ K + A +A AAK+AR++V++K+V+ LPGKL+
Sbjct: 359 VSQAVAEMLEAYLEEHPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKLS 418
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS P+ E+F+VEGDSAGG+AK+GRDR FQAILPLRGKILNVE+ +++NEEI+
Sbjct: 419 DCSEQDPKLCEVFLVEGDSAGGTAKEGRDRNFQAILPLRGKILNVEKAMGHKVFENEEIR 478
Query: 541 NLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
N+ ALG+ + E+ K E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L +
Sbjct: 479 NIFTALGVTIGTEEDSKALNLEKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIEN 538
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
+++ PPLY V++G + +Y + D E ++ S A ++QR+KGLGEM QLW+T
Sbjct: 539 EHVFIATPPLYLVKKGNKKEYAWTDEERIELMEQMGSGA--TVQRYKGLGEMNAEQLWDT 596
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T+NPE R+L+++ I++ EA+ VFS LMG V R+E I+ A +D
Sbjct: 597 TMNPEHRILRKVTIDNLQEADRVFSMLMGDEVPPRREFIEQNATYAKID 645
>gi|168181121|ref|ZP_02615785.1| DNA gyrase, B subunit [Clostridium botulinum NCTC 2916]
gi|226947228|ref|YP_002802319.1| DNA gyrase subunit B [Clostridium botulinum A2 str. Kyoto]
gi|182668169|gb|EDT80148.1| DNA gyrase, B subunit [Clostridium botulinum NCTC 2916]
gi|226844613|gb|ACO87279.1| DNA gyrase, B subunit [Clostridium botulinum A2 str. Kyoto]
Length = 637
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/643 (50%), Positives = 446/643 (69%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+G + QK+ RG T L V + GT+I F PD ++F
Sbjct: 125 VVNALSEQCEVEVRREGHIWKQKFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNK 235
Query: 306 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH + ++ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDENKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDIDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNGEVRGIVDTI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + + +LE +P+V I+ K LSA +A AAKRAR+L R+KS+L S+SLPGKL+DCSS
Sbjct: 355 VGQSIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSILESTSLPGKLSDCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P EI++VEGDSAGGSAKQGR+R FQAILPL+GKI+NVE++ + ++EI+ +I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G++F + +RY++III+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 475 AFGAGI-GKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY++ + K+ Y Y D EL + +IQR+KGLGEM P QLWETT++PE R
Sbjct: 534 PLYRIYKAKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLGEMNPEQLWETTMDPEHR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +EDA EA+ +F+ LMG +V+ R++ I+ NA +VNLD
Sbjct: 594 TLLQVTVEDAMEADEIFTILMGTKVEPRRDFIESNADKVVNLD 636
>gi|300853238|ref|YP_003778222.1| DNA gyrase subunit B [Clostridium ljungdahlii DSM 13528]
gi|300433353|gb|ADK13120.1| DNA gyrase, subunit B [Clostridium ljungdahlii DSM 13528]
Length = 637
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/643 (49%), Positives = 438/643 (68%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY I V +
Sbjct: 7 QTYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCDKINVII 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P+ +H K +E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVTDNGRGMPVGMHHKMKKPTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+ + Q + RGK + L + + GT+I F PD ++F
Sbjct: 125 VVNALSEICEVEVKRESHIWRQVFKRGKVASGLDI----IGDSEEHGTKIHFKPDAEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I++D++T+A R+RELAFLN + I L E D E+ + + GG++ +V +LN +K
Sbjct: 181 -EIEYDYDTLAQRLRELAFLNKGIKIRLEDERDDKEEI----FHYEGGIKSFVTYLNRNK 235
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+P+H + + D ++++A+Q+ +D Y++ + +AN+I T++GGTH+ G K++LTR
Sbjct: 236 QPIHKEPIYVEGKKDDYSVEIAIQY-NDGYTENIFAFANNIDTVEGGTHLAGFKSALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N KK +K+ D +LSGE +REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 FNDYAKKFGILKENDKNLSGEDIREGLTAVISVKLVDPQFEGQTKTKLGNSEVRGIVDSI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L +L+ +P V IL KSL A +A AA++AR+L R+KS+L ++SLPGKLADCSS
Sbjct: 355 MGESLNNFLQENPQVAKMILDKSLMASRAREAARKARELTRRKSILENTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI++VEGDSAGGSAKQGR+R+FQAILPLRGKI+NVE++ + EEI+ +I
Sbjct: 415 KDPSECEIYLVEGDSAGGSAKQGRNRKFQAILPLRGKIMNVEKQRLDKILGYEEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF +RY+KIII+TDADVDGAHIRTLLLTFF+RY K L ++ +Y+ P
Sbjct: 475 AFGAGI-GKDFDVNKIRYNKIIIMTDADVDGAHIRTLLLTFFFRYMKELVEKCHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLY+V +GK+ Y Y D EL + + ++ IQR+KGLGEM QLW+TT+NPE R
Sbjct: 534 PLYRVAKGKKEYYAYSDDELDVLLTEIGGKDSNVDIQRYKGLGEMDSEQLWDTTMNPETR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
L Q+ +ED A+ +F+ LMG +V+ R+ IQ NA +VNLD
Sbjct: 594 TLIQVNVEDTMAADEIFTILMGDKVEPRRNFIQENAKKVVNLD 636
>gi|422871190|ref|ZP_16917683.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1087]
gi|328945965|gb|EGG40112.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1087]
Length = 649
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/657 (47%), Positives = 443/657 (67%), Gaps = 26/657 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+AS+I+V + DNSI P+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
LHGVG SVVNALS L+V V+++G ++Q+YSRG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYSRGQVVADLEI----IGETDRTGTTV 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGIE--QVKDYHYEGGIA 233
Query: 296 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ +
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKIL 472
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI++L A+G G G DF RY K++I+TDADVDGAHIRTLLLT YRY K +
Sbjct: 473 ANEEIRSLFTAMGTGF-GADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLIYRYMKPVL 531
Query: 595 DEGCIYVGVPPLYKVERGKQVQY-----CYDDAELKKVKSSFPSN-ALYSIQRFKGLGEM 648
+ G +Y+ PP+Y V+ G +V+ + EL+ + + + +IQR+KGLGEM
Sbjct: 532 EAGFVYIAQPPIYGVKVGSEVKEYIQPGANQEEELQAALARYSEGRSKPTIQRYKGLGEM 591
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NPE R++ ++ ++DAAEA+ +F LMG RV+ R+E I+ A LD
Sbjct: 592 DDHQLWETTMNPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLD 648
>gi|451816904|ref|YP_007453105.1| DNA gyrase subunit B [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451782883|gb|AGF53851.1| DNA gyrase subunit B [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 635
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/641 (50%), Positives = 439/641 (68%), Gaps = 26/641 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ IEV +
Sbjct: 8 YDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGFCKKIEVNINE 67
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+ +HP KS +E ++T+LHAGGKFGG S LHGVG SVV
Sbjct: 68 DNSITVSDDGRGMPVGMHPKMGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE VTV RDG + QKYS+GK +T V+ + + D+ GT F PD +F
Sbjct: 126 NALSEDCTVTVKRDGHVWQQKYSKGKVLT----EVVKIGNSDQTGTETYFKPDAGIFDEI 181
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
I FD + +A R+RELAFLN + I L D ++ + + GG++ +V +LN +K P
Sbjct: 182 I-FDFDVLAQRLRELAFLNKGIYIEL----IDKRYDKKETFHYEGGIKSFVSYLNRNKVP 236
Query: 308 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
LH+ + + V D I +++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR N
Sbjct: 237 LHEEPIYIEGVKDKIAVEIALQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTRVFN 295
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
KK +K+ D + +G+ +REGLT +ISV++ P+FEGQTKT+LGN EVR +VD
Sbjct: 296 DYAKKFGHIKENDKNFTGDDIREGLTAVISVKIEEPQFEGQTKTKLGNSEVRGIVDSIAG 355
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E + +LE +P V I+ K+L A +A AA++AR+L R KSVL S+LPGKLADCSS
Sbjct: 356 ENIGIFLEENPAVGKMIVDKALMAARARDAARKARELTR-KSVLERSALPGKLADCSSKD 414
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P E EI+IVEGDSAGGSAKQGR+R+FQAILPLRGKILNVE++ + + I++++ A
Sbjct: 415 PRECEIYIVEGDSAGGSAKQGRNRKFQAILPLRGKILNVEKQRLDRILNADTIRSMVTAF 474
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G DF E +RY +III+TDADVDGAHIRTLLLTFFYRY K L D+G +Y+ PPL
Sbjct: 475 GAGI-GNDFDVEKIRYDRIIIMTDADVDGAHIRTLLLTFFYRYMKQLIDDGHVYIAQPPL 533
Query: 607 YKVERGKQVQYCYDDAELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 665
Y++ + K+ Y Y D EL++V + + IQR+KGLGEM +QLW+TT++PE+R+L
Sbjct: 534 YRIIKNKKEYYAYSDKELEQVLQEVGGKDNSTDIQRYKGLGEMNAIQLWDTTMDPEKRIL 593
Query: 666 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
++ +EDA A+ +F+ LMG +V+ RK+ I QNA +VNLD
Sbjct: 594 LKVNVEDAMAADEIFTILMGEKVEPRKDFIQQNAKYVVNLD 634
>gi|221195249|ref|ZP_03568305.1| DNA gyrase, B subunit [Atopobium rimae ATCC 49626]
gi|221185152|gb|EEE17543.1| DNA gyrase, B subunit [Atopobium rimae ATCC 49626]
Length = 649
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/658 (48%), Positives = 429/658 (65%), Gaps = 42/658 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y S+ I VLEGLE VRKRP MYIG+T GLHHLV+EI+DN+VDEA AG+ + I+V + A
Sbjct: 9 YSSDDITVLEGLEPVRKRPGMYIGTTSSAGLHHLVWEIVDNSVDEALAGFCTKIKVTVHA 68
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP+D+HP LE VLT+LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 69 DNSVSVEDNGRGIPVDIHPKKKIPTLEVVLTILHAGGKF--DNSAYKVSGGLHGVGVSVV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS+ + V RDG Y ++ RGK T + + GT I FWPD +F TT
Sbjct: 127 NALSKRMIAEVKRDGKIYQMEFKRGKT----TQKMKEIGKTKSTGTTITFWPDDTIFETT 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
FD T+ R++E AFLN L I L E + P + EY +AGG+ ++V++LN +K
Sbjct: 183 TYNFD--TLRDRLQETAFLNKNLKIVLTDERELIP---RVVEYQYAGGIIDFVKYLNDEK 237
Query: 306 -------KPLHDVVGFRKDVDGIT-----IDLALQWCSDAYSDTMLGYANSIRTIDGGTH 353
KP++ + + D T +++A+QW ++ ++D L +AN I T +GG H
Sbjct: 238 TVLTGLSKPIY--IEGSSEPDAPTSQMGEVEVAMQWNTE-FNDRTLSFANDIYTEEGGMH 294
Query: 354 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
+EG + +LT+ +N G + +K+KD L+G+ +REGLT +ISV++P+P+FEGQTK +LG
Sbjct: 295 LEGFRTALTKAVNDYGTRQGILKEKDPKLTGDDIREGLTAVISVKLPDPQFEGQTKAKLG 354
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
+ +R + ++ V L EYLE HP+ IL K+ A K LAA++AR+ R+K +L S+
Sbjct: 355 SSYMRTLTNKIVSSGLAEYLEEHPNQAKEILKKATQAAKGRLAARKAREATRRKGLLESA 414
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
SLPGKLADCS PE +E+FIVEGDSAGGSAK RDR QA+LPLRGKILNVER
Sbjct: 415 SLPGKLADCSVKDPEMTELFIVEGDSAGGSAKMARDRSIQAVLPLRGKILNVERVQAHRA 474
Query: 534 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 593
++ I +LI A+G GV GE+F E RYHKI+I+TDADVDG+HIR LLLTFFYRY K +
Sbjct: 475 LSSDTITSLITAIGTGV-GEEFNLEKARYHKIVIMTDADVDGSHIRILLLTFFYRYMKPM 533
Query: 594 FDEGCIYVGVPPLYKVE-RGKQ-VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 651
D G IYV PPLY+++ +GK+ +Y Y D EL F ++ Y++QR+KGLGEM P
Sbjct: 534 IDAGYIYVAQPPLYQIKAKGKKHGKYIYTDEELAVEAKQFEDSSKYTVQRYKGLGEMDPE 593
Query: 652 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 709
QLW TT+ P+ R+L ++ I+DA A+ + LMG +V+ RK+ IQ A V LDI
Sbjct: 594 QLWSTTMEPKNRILLKVTIDDAMAADRAVADLMGNQVEKRKDFIQTHAKDVRF--LDI 649
>gi|427412749|ref|ZP_18902941.1| DNA gyrase, B subunit [Veillonella ratti ACS-216-V-Col6b]
gi|425715565|gb|EKU78551.1| DNA gyrase, B subunit [Veillonella ratti ACS-216-V-Col6b]
Length = 633
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/642 (50%), Positives = 439/642 (68%), Gaps = 24/642 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y ++ IQVLEGLEAVR+RP MYIGST +GLHHLVYE++DN+VDEA AGY ++IEV++
Sbjct: 4 QNYSADNIQVLEGLEAVRRRPGMYIGSTSSKGLHHLVYEVVDNSVDEALAGYCTHIEVSI 63
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI P +H T A+E VLT LHAGGKFGG S LHGVG+S
Sbjct: 64 NEDNSITVIDDGRGIPTGMH-ETGVPAVELVLTKLHAGGKFGGGGYKVSGG--LHGVGIS 120
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE V V +DG E + RG T L + S + GT + F PD ++F
Sbjct: 121 VVNALSEWTVVKVRQDGKEQEISFERGHLRTPLKV----IGSANDTGTTVIFKPDAEIFE 176
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
T + F+ N + R++ELAFLN L I L D PE++ + + GG+ +V++LN +K
Sbjct: 177 TTV-FEFNVLCTRLQELAFLNKGLRITLT--DKRPEEDVVESFMYEGGIVSFVEFLNENK 233
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
++ ++ D + +D+A Q+ +D+YS+ +L + N+I TIDGGTH+ G +++LTRT
Sbjct: 234 DLVNPTIIDVENTRDDVVVDVAFQY-NDSYSENLLSFVNNINTIDGGTHLSGFRSALTRT 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
LN G+K+ +KD + +LSG+ VREGLT +ISV+V +P+FEGQTK +LGN EV+ + D
Sbjct: 293 LNDYGRKAGLIKDNESNLSGDDVREGLTAVISVKVLDPQFEGQTKAKLGNSEVKGITDTV 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +LE HP I+ K+ +A +A AA++AR+L R+K+ L SSLPGKLADCS
Sbjct: 353 VSEGLKTFLEEHPAEAKRIIDKATTANRAREAARKARELTRRKNALEVSSLPGKLADCSE 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P +EI++VEGDSAGGSAKQGRDRR+QAILPLRGKILNVE+ + N EI+++I
Sbjct: 413 KDPLMTEIYLVEGDSAGGSAKQGRDRRYQAILPLRGKILNVEKARLDKILANNEIRSMIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ P
Sbjct: 473 AFGTGI-GEDFDLDKSRYHKIIIMTDADVDGAHIRTLLLTFFYRYMKPLIEEGRVYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PLY++++GK Y Y DAE+ + + +IQR+KGLGEM P QLWETT+NPE R
Sbjct: 532 PLYQIKKGKGHWYVYSDAEMAAKLDEIGRDNI-TIQRYKGLGEMNPEQLWETTMNPENRT 590
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ Q+ +ED+ EA+ +FS LMG +V+ R++ I++ A LV NLD
Sbjct: 591 ILQVSLEDSIEADKIFSVLMGDKVEPRRKFIEDNAKLVRNLD 632
>gi|431798338|ref|YP_007225242.1| DNA gyrase subunit B [Echinicola vietnamensis DSM 17526]
gi|430789103|gb|AGA79232.1| DNA gyrase, B subunit [Echinicola vietnamensis DSM 17526]
Length = 652
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 309/648 (47%), Positives = 435/648 (67%), Gaps = 27/648 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQ+LEGLEAVRKRPAMYIG G +GLHHL++E++DN++DEA AG+ I V +L
Sbjct: 12 YSAGNIQILEGLEAVRKRPAMYIGDVGVKGLHHLIWEVVDNSIDEALAGHCDTIHVTVLE 71
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP D+H +SALE V+TVLHAGGKF + Y VSGGLHGVG+S V
Sbjct: 72 DNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCV 129
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L+ TV+R+G + Q+YSRG P T +T + +++GT I F PD +FT
Sbjct: 130 NALSTHLKATVYRNGKVFEQEYSRGVPQTGVT----EIGETEKRGTIIHFVPDGDIFTVT 185
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKN-QYNEYFFAGGLEEYVQWLN-TD 304
++ + TIA R+RE+AFLN + I + + D E N + +E+F GGL E+V++L+ T
Sbjct: 186 -EYKYETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETR 244
Query: 305 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+K + + + + + + + +A+ + S ++S+ ++ Y N+I T +GGTH+ G + +LTRT
Sbjct: 245 EKIIQEPIYIESEKNAVPVQVAMSYNS-SFSENVVSYVNTINTYEGGTHVSGFRRALTRT 303
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L KS + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +
Sbjct: 304 LKGYADKSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSA 363
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L +LE HP I+ K + A +A AA++AR++V++K+VL LPGKLADC++
Sbjct: 364 VSEVLQYWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCAN 423
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
T PE E+++VEGDSAGGSAKQGRDR FQAILPL+GKILNVE+ E +Y N+EI+N++
Sbjct: 424 TNPEVCELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILT 483
Query: 545 ALGLGVKGEDFKKE----ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
ALG+ + +KE LRYHKI+I+TDAD+DG+HIRTL+LT F+RY ++L + G +Y
Sbjct: 484 ALGVKFGTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVY 543
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL---YSIQRFKGLGEMMPVQLWETT 657
+ +PPLY +++GK +YC+ + E K+ + IQR+KGLGEM P QLW TT
Sbjct: 544 IALPPLYLLKKGKDERYCWSEDERIKLTKEMAGDGKTDNVGIQRYKGLGEMNPEQLWTTT 603
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
++PE R LKQ+ IE AAEA+ +FS LMG V R+E I+ A +D
Sbjct: 604 MDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIEKNAKYAKID 651
>gi|365130926|ref|ZP_09341647.1| DNA gyrase, B subunit [Subdoligranulum sp. 4_3_54A2FAA]
gi|363619283|gb|EHL70603.1| DNA gyrase, B subunit [Subdoligranulum sp. 4_3_54A2FAA]
Length = 642
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/641 (48%), Positives = 434/641 (67%), Gaps = 22/641 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-- 134
Y QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYEI+DNA+DEA AG+ +IEV +
Sbjct: 11 YDGSQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNAIDEALAGFCDHIEVNIRE 70
Query: 135 -----LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+ DN IP+D+ P A+ V T+LHAGGKFGG +SGY V+GGLHGVG SVV
Sbjct: 71 GNIIRVTDNGRGIPVDIQPKLGIPAVTVVFTILHAGGKFGGDNSGYKVAGGLHGVGASVV 130
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE L V V +DG+ Y Q + RG L ++ P D D GT + F PD ++F
Sbjct: 131 NALSEWLNVVVRKDGVAYKQSFKRGVADADLQ-NLGPTDEPD--GTTVTFKPDPEMFEV- 186
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK- 306
+ +D++T+ R+RE AFLN + I L E + EK + + GG+ +V ++ ++
Sbjct: 187 LDYDYDTLNTRLREEAFLNAGVRITLTDERAGQEKQE--SMCYEGGIRSFVDHIHQKRQL 244
Query: 307 -PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
LH DV+ + ++ ++ALQ+ +++Y++ +L +AN++ T DGGTH EG K++LTR
Sbjct: 245 EVLHPDVIYLKGQLNDSIAEVALQY-NNSYNELILSFANNVNTPDGGTHEEGFKSALTRV 303
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N G++ +K+KD +LSG VREGLT +ISV++ +FEGQTK +LGN E+R +V
Sbjct: 304 FNDFGREKGYIKEKDDNLSGSDVREGLTAVISVKLTEAQFEGQTKAKLGNTEIRGLVSGI 363
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V + L E+ E +P V +I K++ A +A AAK+AR+LVR+KS L +S +PGKLADC
Sbjct: 364 VYDKLKEFFEENPAVAKAIYEKAMQAARAREAAKKARELVRRKSALENSRMPGKLADCRE 423
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P ++EI+IVEGDSAGGSAK GRD + QAILPL GK+LNVE+ +Y N+++ ++
Sbjct: 424 KDPTKTEIYIVEGDSAGGSAKMGRDSKIQAILPLWGKMLNVEKARIDKIYGNDKLTPVVT 483
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ GE+F LRYHK+ I+ DADVDG+HI TLLLTFF+RY + L + G +Y+ P
Sbjct: 484 ALGCGL-GEEFDVSKLRYHKVFIMADADVDGSHICTLLLTFFFRYMRPLIEGGYVYIAQP 542
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+++GKQV+Y Y++ E+ ++ + + R+KGLGEM P QLWETT++PE R+
Sbjct: 543 PLFKLQKGKQVRYAYNEPEMSQISAEMGQGT--KVSRYKGLGEMNPEQLWETTMDPEHRV 600
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+ Q+ IEDA A+ F+ LMG +V+ RKE I+ A NLD
Sbjct: 601 IVQITIEDAMAADEAFTILMGDKVEPRKEFIERNAQYANLD 641
>gi|227511156|ref|ZP_03941205.1| DNA gyrase, B subunit [Lactobacillus buchneri ATCC 11577]
gi|227085638|gb|EEI20950.1| DNA gyrase, B subunit [Lactobacillus buchneri ATCC 11577]
Length = 647
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/646 (49%), Positives = 428/646 (66%), Gaps = 23/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN +DEA AG+A+ I V
Sbjct: 11 LANEYDASQIQVLEGLEAVRKRPGMYIGTTSSQGLHHLVWEIVDNGIDEALAGFATKITV 70
Query: 133 ALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNSI P+D+ T K ALETV T+LHAGGKFGG S LHGVG
Sbjct: 71 TVEKDNSITVTDDGRGIPVDIQKKTGKPALETVYTILHAGGKFGGGGYKVSGG--LHGVG 128
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWPDK 241
SVVNALSE L+V V R+G Y+ +SRG T + HV S D GT++ F PD
Sbjct: 129 ASVVNALSEELDVAVTRNGKVYYMDFSRGHVTTPMKVIDHV----SDDLHGTKVHFLPDP 184
Query: 242 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 301
+F FD + R+RELAFLN +L I +R D PEK ++ + GG+ YV++L
Sbjct: 185 DIFRETTTFDIKVLTARLRELAFLNKELRIIVR--DMRPEKPTEQDFLYEGGIRHYVEYL 242
Query: 302 NTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 360
+ DK+ L + + +D GIT+++A+ + D Y T++ + N+I T +GGTH EG K +
Sbjct: 243 DKDKETLLKEPIYVEGMDNGITVEVAIDYSED-YHSTLMTFTNNIHTYEGGTHEEGFKRA 301
Query: 361 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
LTR +N +K+ +KD + +LSGE VREG T ++S++ P+P+FEGQTKT+LGN + R V
Sbjct: 302 LTRVINDYARKNNLLKDNEANLSGEDVREGTTAVVSIKHPDPQFEGQTKTKLGNSDARTV 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
D+ ++ +++L +P + I+ + L A KA AAKRAR++ R+KS L SSLPGKLA
Sbjct: 362 TDRIFSDHFSKFLMENPKLARKIIDRGLLASKARSAAKRAREVTRRKSGLEISSLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
D +S P+ SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NEEI+
Sbjct: 422 DNTSKDPKISELFIVEGDSAGGSAKQGRARLTQAILPIRGKILNVEKASMDRILANEEIR 481
Query: 541 NLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
+L A+G G G+DF + YHK+II+TDADVDGAHI+TLLLT YRY + L D G +Y
Sbjct: 482 SLFTAMGTGF-GDDFDLSKINYHKLIIMTDADVDGAHIQTLLLTLIYRYMRPLIDAGYVY 540
Query: 601 VGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNP 660
V PPLY+V +GK +Y D +L + + + IQR+KGLGEM QLW+TT+NP
Sbjct: 541 VAQPPLYQVRQGKMQRYIDSDDDLNQFLGTLQPSPKPVIQRYKGLGEMDAEQLWDTTMNP 600
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
E R L ++ DAAEAN VFS LMG +V+ R+E I++ A V NLD
Sbjct: 601 ENRHLLRVESSDAAEANHVFSMLMGDKVEPRREFIEDNATFVENLD 646
>gi|167755161|ref|ZP_02427288.1| hypothetical protein CLORAM_00666 [Clostridium ramosum DSM 1402]
gi|365832183|ref|ZP_09373724.1| DNA gyrase, B subunit [Coprobacillus sp. 3_3_56FAA]
gi|374626903|ref|ZP_09699311.1| DNA gyrase, B subunit [Coprobacillus sp. 8_2_54BFAA]
gi|167705211|gb|EDS19790.1| DNA gyrase, B subunit [Clostridium ramosum DSM 1402]
gi|365260926|gb|EHM90863.1| DNA gyrase, B subunit [Coprobacillus sp. 3_3_56FAA]
gi|373913448|gb|EHQ45285.1| DNA gyrase, B subunit [Coprobacillus sp. 8_2_54BFAA]
Length = 641
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/648 (50%), Positives = 435/648 (67%), Gaps = 22/648 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +Y IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AGYAS+
Sbjct: 3 EEKVEHSYDESDIQVLEGLEAVRKRPGMYIGTTSIRGLHHLVWEIVDNSIDEALAGYASH 62
Query: 130 IEVAL---------LADNSIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V L +P H T S +ET+ TVLHAGGKFGG S LH
Sbjct: 63 IRVILKDDDVVQVIDDGRGMPTGTHAKTGISTVETIFTVLHAGGKFGGGGYKVSGG--LH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWP 239
GVG SVVNALSE LEV V RDG EY+Q++ G KP L + D GT + F
Sbjct: 121 GVGASVVNALSEWLEVNVHRDGHEYYQRFENGGKPAGELKI----IGDSDITGTIVTFKA 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
DK +F +D++T+ RIRELAFLN L ++L ED ++ +EY++ GG++EYV
Sbjct: 177 DKIIFKEGTVYDYDTLRQRIRELAFLNKGLRLSL--EDQRNGVDRKHEYYYEGGIKEYVA 234
Query: 300 WLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K P+H+ + + +D+ ITI++ +Q+ +D Y + + N+I T +GGTH EG +
Sbjct: 235 YINKNKTPIHEEIIYVEDMQQEITIEVGMQY-NDGYQSNIYSFCNNINTHEGGTHEEGFR 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR +N+ K +K + +LSG+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 294 LALTRVINNYAKSKGLLKKDEEALSGDDVREGLTAIISVKHPDPQYEGQTKTKLGNAEVR 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
K+ + L ++L +PD I+ K++ A +A +AAK+AR++ R+K+VL S+LPGK
Sbjct: 354 KIASNIISASLDKFLLENPDTAKIIVDKAIVAARARMAAKKAREMTRRKNVLEVSNLPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS E EIFIVEGDSAGGSAK GRDRR QAILPLRGKILNVE+ + N E
Sbjct: 414 LADCSSKDASECEIFIVEGDSAGGSAKMGRDRRIQAILPLRGKILNVEKSRLEKILGNAE 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+++I A G G+ GE+F + LRYHKI+I+TDADVDG HIR L+LTF YRY + L + G
Sbjct: 474 IRSMITAFGTGI-GEEFNLDKLRYHKIVIMTDADVDGGHIRILMLTFLYRYLRPLVEGGF 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY ++ GK YCY D EL +K+ A YSIQR+KGLGEM QLWETT+
Sbjct: 533 VYAAQPPLYLLKHGKDEYYCYSDEELDDLKTKIGEGAKYSIQRYKGLGEMNAEQLWETTM 592
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+PE+R+L Q+ +++A EA+++F LMG +V+ R+E IQ NA + +LD
Sbjct: 593 DPEKRILNQIDLDEAMEADMIFDMLMGEKVEPRREFIQENAKYVTDLD 640
>gi|448350241|ref|ZP_21539060.1| DNA gyrase subunit B [Natrialba taiwanensis DSM 12281]
gi|445637748|gb|ELY90896.1| DNA gyrase subunit B [Natrialba taiwanensis DSM 12281]
Length = 644
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/637 (49%), Positives = 429/637 (67%), Gaps = 21/637 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDEITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS LE V RDG Y + G+P + V ++ + GT IRFWPD +F TT
Sbjct: 125 NALSARLETEVKRDGGVYEHTFETGEPAGDME-RVRDMEPGEATGTTIRFWPDTDIFETT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 303
+ F +T++ R+RELAFLN + I LR +E + + ++ E Y + GG+ E+V++LN
Sbjct: 184 DMAF--STLSNRLRELAFLNSGVRITLRDERESATEDGDELAETYEYQGGIREFVEYLNE 241
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +H DV+ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LT
Sbjct: 242 TRSAMHEDVIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALT 300
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N ++ + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+
Sbjct: 301 RVVNDYANENDLLSDIEENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVE 360
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 GAMHDGLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADC 420
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ PE++E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+
Sbjct: 421 QTKDPEKAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNM 480
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I +G G+ G++F E +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 481 ITGIGAGI-GDEFNVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYAT 539
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + DAE ++ + +QRFKGLGEM P QLWETT+NP+
Sbjct: 540 QPPLYRIRYRGETYDAMTDAERDEIVEEKCNGNPSQVQRFKGLGEMNPEQLWETTMNPDN 599
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 600 RILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKENA 636
>gi|283768639|ref|ZP_06341551.1| DNA gyrase, B subunit [Bulleidia extructa W1219]
gi|283105031|gb|EFC06403.1| DNA gyrase, B subunit [Bulleidia extructa W1219]
Length = 659
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/650 (48%), Positives = 432/650 (66%), Gaps = 31/650 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V Y E IQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AGYAS +E+
Sbjct: 23 VDHAYEDEDIQVLEGLEAVRKRPGMYIGSTSSVGLHHLVWEIVDNGIDEAMAGYASQVEI 82
Query: 133 ALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DN +P ++ T S +ET+ TVLHAGGKFGG + Y VSGGLHGVG
Sbjct: 83 TVDEDNIVSVEDDGRGMPTGMNEKTGISTIETIFTVLHAGGKFGGGA--YKVSGGLHGVG 140
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTL----TCHVLPVDSKDRQGTRIRFW 238
S VNALSE LEVTV+ +G Y ++ G PV L TC V D+ G+ +RF
Sbjct: 141 ASAVNALSEFLEVTVYHEGSVYFVRFENGGHPVEPLKVIGTCDV------DKHGSLVRFK 194
Query: 239 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAGGLEEY 297
D +FT +D N + RIR+LAFLN + I + + EK ++ YFF GGL+EY
Sbjct: 195 ADPTIFTETTVYDFNILRNRIRQLAFLNKGIRIKFHDLREVNFEKRDHD-YFFEGGLKEY 253
Query: 298 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 356
V+++N +K +H DV+ D I +++A Q+ + +Y+ ++ + N+I T+DGGTH EG
Sbjct: 254 VKFINENKDKVHEDVIYSEGYEDNIQVEVACQYNT-SYNPSIYTFCNNITTVDGGTHEEG 312
Query: 357 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 416
+ +LTR +N +++ +K+KD +++ E +EGLT IISV+ P+P++ QTK++L N E
Sbjct: 313 FRMALTRIVNKYARENNFLKEKDENVTQEDCKEGLTAIISVKHPDPQYISQTKSKLTNSE 372
Query: 417 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 476
VRK+V +L +P+ +I+ K + A +A LAAKRA+++ R KS ++ SLP
Sbjct: 373 VRKIVSDIFGTQFERFLMENPNQAKAIMEKIVIASQARLAAKRAKEITR-KSSIKVGSLP 431
Query: 477 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 536
GKL+DCSS P SEI++VEGDSAGGSAK GRD FQAILPLRGKILNVE+ ++N
Sbjct: 432 GKLSDCSSKDPSISEIYLVEGDSAGGSAKNGRDSHFQAILPLRGKILNVEKTRPEKAFEN 491
Query: 537 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 596
+EI+++I A G GV+ E LRYHKI+I+TDADVDGAHIRTLLLTFFYR+ + + ++
Sbjct: 492 QEIRSMITAFGAGVQDE-VDTSKLRYHKIVIMTDADVDGAHIRTLLLTFFYRFLRPVLEQ 550
Query: 597 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
G +Y+ PPL+KV++G+ V+Y Y D +L+++K+ SIQR+KGLGEM QLWET
Sbjct: 551 GYVYIAQPPLFKVQKGQSVRYAYTDRQLEELKAEMGER--LSIQRYKGLGEMDASQLWET 608
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
T++P+ R L ++ IEDA A+ FS LMG V+ RK I +NA + NLD
Sbjct: 609 TMDPKSRTLIRVTIEDAEYADQNFSMLMGEEVEPRKNFILENAHFVENLD 658
>gi|345867569|ref|ZP_08819577.1| DNA gyrase, B subunit [Bizionia argentinensis JUB59]
gi|344047973|gb|EGV43589.1| DNA gyrase, B subunit [Bizionia argentinensis JUB59]
Length = 649
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/656 (46%), Positives = 434/656 (66%), Gaps = 31/656 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
KE Y ++ IQ LEG+E VR RP+MYIG TG RGLHHLVYE++DN++DEA AG+
Sbjct: 5 KEEFNKDNYSADSIQALEGMEHVRMRPSMYIGDTGTRGLHHLVYEVVDNSIDEAMAGHCD 64
Query: 129 NIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 179
NI V + DNSI PID+H SALE V+T + AGGKF S Y VSGGL
Sbjct: 65 NITVTINEDNSITTEDDGRGIPIDMHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGL 122
Query: 180 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 239
HGVG+S VNALSE L TV+R G + Q+Y +GKP+ V V D++GT I F P
Sbjct: 123 HGVGVSCVNALSEHLTATVYRLGEIWEQEYEKGKPMYP----VKKVGETDKRGTVITFKP 178
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGL 294
D +FT +++ ++T+A R+RELA+LN +T+ L +KED E ++ GL
Sbjct: 179 DPTIFTHVLEYSYDTLASRMRELAYLNKGITVHLVDKRHKKEDGTFEGETFHS---KEGL 235
Query: 295 EEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 353
+E++++L+ +++PL +V+ F + +G+ +++A+ + + +Y++ + Y N+I T +GGTH
Sbjct: 236 KEFIKFLDGNREPLTKEVIAFEGEKNGVPVEVAMIYNT-SYAENLHSYVNNINTHEGGTH 294
Query: 354 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 413
+ G + LT TL +S + ++G+ REGLT IISV+V P+FEGQTKT+LG
Sbjct: 295 LSGFRRGLTHTLKKYADESGMLDKLKFDIAGDDFREGLTAIISVKVQEPQFEGQTKTKLG 354
Query: 414 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 473
N EV V Q+V E LT+YLE +P+ I+ K + A +A AA++AR++V++K+V+
Sbjct: 355 NREVSASVSQAVSEMLTDYLEENPEDAKIIVQKVILAAQARHAAQKAREMVQRKTVMSIG 414
Query: 474 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 533
LPGKL+DCS P + E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +
Sbjct: 415 GLPGKLSDCSEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMTHRV 474
Query: 534 YKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRY 589
++NEEI+N+ ALG+ + E+ K LRYHK++I+ DAD+DG+HI TL+LTFF+RY
Sbjct: 475 FENEEIKNIYTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADIDGSHIETLILTFFFRY 534
Query: 590 QKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMM 649
K L + G IY+ PPLY V++G + +Y + D E ++ + + + IQR+KGLGEM
Sbjct: 535 MKELIENGHIYIATPPLYLVKKGARKKYAWSDQERSEIMAEYGDGS--KIQRYKGLGEMN 592
Query: 650 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLW+TT+NPE R L+Q+ I++ AEA+ +FS LMG V R+E I+ A N+D
Sbjct: 593 AEQLWDTTMNPEFRTLRQVQIDNGAEADRIFSMLMGDEVPPRREFIEKNAIYANID 648
>gi|229496104|ref|ZP_04389826.1| DNA gyrase, B subunit [Porphyromonas endodontalis ATCC 35406]
gi|229317000|gb|EEN82911.1| DNA gyrase, B subunit [Porphyromonas endodontalis ATCC 35406]
Length = 653
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/649 (47%), Positives = 428/649 (65%), Gaps = 26/649 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++++V +
Sbjct: 12 QEYSAGSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTDVKVTI 71
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
L DNSI P+D+HP +SALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 LEDNSISVEDNGRGIPVDIHPKEGRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVS 129
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VNALS L V+RDG + Q++S+GKP+ + V DR GT + F PD +FT
Sbjct: 130 CVNALSTHLRADVYRDGKHFVQEFSKGKPLYS----VKEEGESDRTGTTVTFTPDNSIFT 185
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWLNT 303
+I + +A R+RELAFLN L ++L + D E N E F++ GL+E+V++++
Sbjct: 186 VSI-YQFKILAHRLRELAFLNAGLRLSLTDLRERDEEGNPLTEVFYSEDGLKEFVRFIDQ 244
Query: 304 DK-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K L DV+ + D + I++A+ + D Y + + Y N I TI+GGTH+ G + +LT
Sbjct: 245 SKVNLLDDVIHIKNDKGEVPIEVAMTYNQD-YQENVYSYVNDINTIEGGTHLTGFRRALT 303
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTL SK ++ +++ G+ REGLT +IS++V P+FEGQTKT+LGN EV +V+
Sbjct: 304 RTLKQYATDSKMLEKVKVNVEGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVIGIVE 363
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+V E L YLE HP +I+ K + A +A AA AR LV +KS L + LPGKL+DC
Sbjct: 364 SAVSEALAIYLEEHPQQAKAIVDKVVLAAQARHAAANARKLVLRKSPLAAGGLPGKLSDC 423
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+S P + EIF+VEGDSAGG+AKQGRDR +QAILPLRGKILNVE+ + + ++EI+N+
Sbjct: 424 TSKDPAKCEIFLVEGDSAGGTAKQGRDRMYQAILPLRGKILNVEKAMQHKVLDSQEIRNI 483
Query: 543 IRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
ALG+ + E+ K LRYHKIII+TDADVDG+HI TL+LTFF+R ++L D G
Sbjct: 484 YTALGVTIGTEEDSKALNLSKLRYHKIIIMTDADVDGSHIATLILTFFFRNMRSLIDNGY 543
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWET 656
+Y+ PPLY +GK+ YC+ + + + + + + +QR+KGLGEMM QLWET
Sbjct: 544 VYLATPPLYLCRKGKEQAYCWTEQQRRAFIDKYADGNESRVHVQRYKGLGEMMEEQLWET 603
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T+NP+ R+LKQ+ IE AA A+ FS LMG V R+E I++ A +D
Sbjct: 604 TMNPDNRILKQITIESAASADRTFSMLMGEDVPPRREFIEDNATYARID 652
>gi|254555174|ref|YP_003061591.1| DNA gyrase, B subunit [Lactobacillus plantarum JDM1]
gi|300769110|ref|ZP_07078999.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179196|ref|YP_003923324.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380031107|ref|YP_004888098.1| DNA gyrase subunit B [Lactobacillus plantarum WCFS1]
gi|418273681|ref|ZP_12889263.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448819755|ref|YP_007412917.1| DNA gyrase subunit B [Lactobacillus plantarum ZJ316]
gi|254044101|gb|ACT60894.1| DNA gyrase, B subunit [Lactobacillus plantarum JDM1]
gi|300493350|gb|EFK28529.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308044687|gb|ADN97230.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342240350|emb|CCC77584.1| DNA gyrase, B subunit [Lactobacillus plantarum WCFS1]
gi|376010387|gb|EHS83712.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448273252|gb|AGE37771.1| DNA gyrase subunit B [Lactobacillus plantarum ZJ316]
Length = 648
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/650 (49%), Positives = 433/650 (66%), Gaps = 20/650 (3%)
Query: 65 TEAFKENPV--SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
TE KE + ++ Y + QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN +DEA
Sbjct: 2 TENEKETKLEQAREYDASQIQVLEGLEAVRKRPGMYIGTTSSQGLHHLVWEIVDNGIDEA 61
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AG+A+ I V + DNSI P+D+ T K ALETV T+LHAGGKFGG
Sbjct: 62 LAGFANVIHVTVEKDNSITVTDNGRGIPVDIQEKTGKPALETVYTILHAGGKFGGGGYKV 121
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
S LHGVG SVVNALS +L+V V R+G Y+ + RGK T + ++ D GT
Sbjct: 122 SGG--LHGVGASVVNALSSTLDVKVTRNGHVYYMDFERGKVKTPMK--IIGDAPDDAHGT 177
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 293
+ F PD +F +D N + RIRELAFLN L I +R D+ P++ +++ + GG
Sbjct: 178 AVHFVPDPDIFRETTTYDINILTTRIRELAFLNKGLRITIR--DNRPDEPTEDDFLYEGG 235
Query: 294 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 352
+ YV++L+ +K L + + + +GIT+++ALQ+ D +S+ M + N+I T +GGT
Sbjct: 236 IRHYVEYLDKNKTVLFPEPIYVEGEQNGITVEVALQYTDDYHSNLMT-FTNNIHTYEGGT 294
Query: 353 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 412
H EG K +LTR +N +K+ +K+ D +LSGE VREG+T ++SV+ P+P+FEGQTKT+L
Sbjct: 295 HEEGFKRALTRVINDYARKNNLLKESDANLSGEDVREGMTAVVSVKHPDPQFEGQTKTKL 354
Query: 413 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 472
GN + R VD+ E+ ++YL +P V ++ K L A KA +AAKRAR++ R+KS L
Sbjct: 355 GNSDARAAVDRLFSEHFSKYLMENPSVARKVVDKGLLASKARVAAKRAREVTRKKSGLEI 414
Query: 473 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAA 532
S+LPGKLAD SS PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+
Sbjct: 415 SNLPGKLADNSSKDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASIDK 474
Query: 533 MYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKT 592
+ NEEI++L A+G G G DF YHK+II+TDADVDGAHIRTLLLT FYRY +
Sbjct: 475 ILANEEIRSLFTAMGTGFGG-DFDLSKANYHKLIIMTDADVDGAHIRTLLLTLFYRYMRP 533
Query: 593 LFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 652
L D G +Y+ PPLY+V +GK V+Y D EL +V + +QR+KGLGEM Q
Sbjct: 534 LVDAGFVYIAQPPLYQVRQGKFVKYIDSDEELSEVMGQLAPSPKPVVQRYKGLGEMDAEQ 593
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 702
LWETT++P++R L ++ EDAA+A+ VFS LMG +V R+E I++ A V
Sbjct: 594 LWETTMDPDKRRLLRVRDEDAADADGVFSMLMGDQVKPRREFIEDNAKFV 643
>gi|298207945|ref|YP_003716124.1| DNA gyrase subunit B [Croceibacter atlanticus HTCC2559]
gi|83850586|gb|EAP88454.1| DNA gyrase subunit B [Croceibacter atlanticus HTCC2559]
Length = 645
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 299/647 (46%), Positives = 430/647 (66%), Gaps = 25/647 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA GY I+V +
Sbjct: 7 KQYSADSIQALEGMEHVRMRPSMYIGDVGIRGLHHLVYEVVDNSIDEAMGGYCDTIDVII 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNSI PI +H SALE V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 67 NEDNSITTKDNGRGIPIGIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VNALS+ L+ +V +DG + Q+Y RGKP+ V V D GT + F PD Q+F
Sbjct: 125 CVNALSDHLKASVHKDGKIWEQEYERGKPLYP----VKAVGDTDFSGTVVTFHPDNQIFQ 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNT 303
I++++ T+A R+RELAFLN LTI L + +K ++ +E FF+ GL E+V++L+
Sbjct: 181 QTIEYNYETLASRMRELAFLNKGLTITLTDKRQTDDKGEFISERFFSEEGLSEFVRFLDG 240
Query: 304 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
++ P+ DV+ + +G+ +++A+ + S +Y++ + Y N+I T +GGTH+ G + LT
Sbjct: 241 NRDPIIKDVISMEGEKNGVPVEVAMIYNS-SYAENLHSYVNNINTHEGGTHLAGFRRGLT 299
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
+L S + ++G+ REGLT IISV+V P+FEGQTKT+LGN EV V
Sbjct: 300 SSLKKFADASGMLDKLKFDIAGDDFREGLTAIISVKVSEPQFEGQTKTKLGNREVTSAVS 359
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
Q+V E + ++E +P+ +I+ K + A +A AAK+AR++V++K+V+ LPGKL+DC
Sbjct: 360 QAVSEMIEIHMEENPNDAKTIIEKVILAAQARHAAKKAREMVQRKTVMSIGGLPGKLSDC 419
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S+ P E E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +++NEEI+N+
Sbjct: 420 SNQDPAECEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMSHKVFENEEIKNI 479
Query: 543 IRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
ALG+ + E+ K LRYHKI+I+ DADVDG+HI TL+LTFF+RY K L + G
Sbjct: 480 FTALGVTIGTEEDSKALNLSKLRYHKIVIMCDADVDGSHIATLILTFFFRYMKELIEAGH 539
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
IY+ PPLY +++G++ +Y +++ E + + + F + S+QR+KGLGEM QLW+TT+
Sbjct: 540 IYIATPPLYLIKKGQKKRYAWNEDEREAIANEFKGSV--SVQRYKGLGEMNAEQLWDTTM 597
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
NPE R L+Q+ I++ EA+ +FS LMG V R+E I+ A N+D
Sbjct: 598 NPEFRTLRQVAIDNGVEADRIFSMLMGDDVPPRREFIEKNAKYANID 644
>gi|261403882|ref|YP_003240123.1| DNA gyrase subunit B [Paenibacillus sp. Y412MC10]
gi|261280345|gb|ACX62316.1| DNA gyrase, B subunit [Paenibacillus sp. Y412MC10]
Length = 636
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 428/642 (66%), Gaps = 25/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG +IE+ +
Sbjct: 7 TYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEAMAGICDHIEIIVH 66
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + KS LE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 67 EDNSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 124
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P + + D GT + F PD ++FT
Sbjct: 125 VNALSSKVVVQVKRDGHIYQQEYHRGVPQYDIKV----IGDSDDHGTTVTFLPDPEIFTE 180
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+D+ T+ RIRELAFLN + + L E + ++YF + GG+ EYV++LN K
Sbjct: 181 TTVYDYTTLLTRIRELAFLNKGIALTLTDE-----RTGASDYFKYEGGIIEYVKFLNEKK 235
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH D + D I ++++LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR
Sbjct: 236 EALHEDPIYVEGSRDNIQVEVSLQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRI 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ +KD +LSG+ VREGLT IISV+VP P+FEGQTKT+LGN EVR +V+
Sbjct: 295 INDYARKTGLIKDNTSNLSGDDVREGLTAIISVKVPEPQFEGQTKTKLGNSEVRGIVESL 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E L E+L+ +P V IL K+L A +A AA++AR++ R+KS L S+LPGKLADCSS
Sbjct: 355 FAEKLQEFLQENPAVSRRILEKALQASRAREAARKAREMTRRKSALEVSALPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 415 KDASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAIIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ EDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G IY+ P
Sbjct: 475 ALGTGI-AEDFDLSKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+ER K ++Y + E ++ F N ++QR+KGLGEM QLWETT++PE R
Sbjct: 534 PLFKIERNKVIRYAGSERERDEIIKEFGENVKINVQRYKGLGEMNAGQLWETTMDPESRT 593
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ Q+ IEDA A+ +F +LMG V+ R++ IQ A V NLD
Sbjct: 594 MLQVTIEDAILADTLFDTLMGDNVEPRRDFIQEHAKSVRNLD 635
>gi|401683255|ref|ZP_10815143.1| DNA gyrase, B subunit [Streptococcus sp. AS14]
gi|400183333|gb|EJO17589.1| DNA gyrase, B subunit [Streptococcus sp. AS14]
Length = 649
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/657 (47%), Positives = 442/657 (67%), Gaps = 26/657 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+AS+I+V + DNSI P+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
LHGVG SVVNALS L+V V+++G ++Q+YSRG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYSRGQVVADLEI----IGETDRTGTTV 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QAKDYHYEGGIA 233
Query: 296 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ +
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKIL 472
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI++L A+G G G DF RY K++I+TDADVDGAHIRTLLLT YRY K +
Sbjct: 473 ANEEIRSLFTAMGTGF-GADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLIYRYMKPVL 531
Query: 595 DEGCIYVGVPPLYKVERGKQVQY-----CYDDAELKKVKSSFPSN-ALYSIQRFKGLGEM 648
+ G +Y+ PP+Y V+ G V+ + EL+ + + + +IQR+KGLGEM
Sbjct: 532 EAGFVYIAQPPIYGVKVGSDVKEYIQPGANQEEELQAALARYSEGRSKPTIQRYKGLGEM 591
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NPE R++ ++ ++DAAEA+ +F LMG RV+ R+E I+ A LD
Sbjct: 592 DDHQLWETTMNPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLD 648
>gi|153952676|ref|YP_001393441.1| DNA gyrase subunit B [Clostridium kluyveri DSM 555]
gi|219853349|ref|YP_002470471.1| DNA gyrase B subunit [Clostridium kluyveri NBRC 12016]
gi|146345557|gb|EDK32093.1| GyrB1 [Clostridium kluyveri DSM 555]
gi|219567073|dbj|BAH05057.1| DNA gyrase B subunit [Clostridium kluyveri NBRC 12016]
Length = 637
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/643 (49%), Positives = 443/643 (68%), Gaps = 25/643 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY I+V +
Sbjct: 7 QTYDENQIQILEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGYCDKIDVVI 66
Query: 135 LADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 185
DNS+ P+ +H K +E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HEDNSVTVADNGRGMPVGIHHKIKKPTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 186 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 245
VVNALSE EV V R+ + Q + RGK T L + + GT+I F PDK++F
Sbjct: 125 VVNALSEICEVEVKREKHVWKQVFKRGKVATGLEI----IGDSEEHGTKIYFKPDKEIFD 180
Query: 246 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
+ FD++ ++ R+RELAFLN + I L+ E S E+ + + GG++ +V +LN +K
Sbjct: 181 -EVDFDYDMLSQRLRELAFLNKGIAITLKDERSGKEE----LFHYEGGIKSFVTYLNRNK 235
Query: 306 KPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ +H + + + G ++++A Q+ ++ YS+ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 QTIHKEPIYVEGIKGDYSVEIAFQY-NNGYSENIFSFANNIDTIEGGTHLAGFKSALTRV 294
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
N KK +K+ D +LSGE +REG+T +IS+++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 FNDYAKKFNILKENDKNLSGEDIREGITAVISIKLVDPQFEGQTKTKLGNSEVRGIVDNI 354
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
+ E L+++L+ +P V +I+ KSL A +A AA++AR+L R+K+VL ++SLPGKLADCSS
Sbjct: 355 MAESLSDFLQENPQVAKTIIDKSLVASRAREAARKARELTRRKTVLENTSLPGKLADCSS 414
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E EI++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE++ + EEI+ +I
Sbjct: 415 KDPSECEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKIMNVEKQRLDKILGYEEIRAMIT 474
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
A G G+ G+DF +RY+KIII+TDADVDGAHIRTLLLTFFYRY + L ++ +Y+ P
Sbjct: 475 AFGAGI-GKDFDISKIRYNKIIIMTDADVDGAHIRTLLLTFFYRYMRELVEKCHVYIAQP 533
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PLYKV + K+ Y Y D EL + + N+ +IQR+KGLGEM QLW+TT+NPE R
Sbjct: 534 PLYKVAKNKKDYYAYSDKELDILLNEIGGKNSNVNIQRYKGLGEMDSEQLWDTTMNPETR 593
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 705
L Q+ +ED A+ +F+ LMG +V+ RK+ +I+NA +VNLD
Sbjct: 594 TLIQVNVEDTIAADEIFTILMGDKVEPRKDFIIENAKKVVNLD 636
>gi|268324621|emb|CBH38209.1| DNA gyrase subunit B [uncultured archaeon]
Length = 635
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/646 (47%), Positives = 439/646 (67%), Gaps = 25/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ ++Y ++ IQVL+ L AVRKRPAMYIG TG RGLHHL E++DN+VDEA G+ ++I V
Sbjct: 1 MEESYSAKDIQVLKDLTAVRKRPAMYIGDTGTRGLHHLANEVIDNSVDEAIIGFCTSIVV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ DNS IP+D+H N SALE V+T LHAGGKF + Y V+GGLHGVG
Sbjct: 61 IIHPDNSVTVTDNGRGIPVDMHSEYNLSALEVVMTKLHAGGKF--DNKVYKVAGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE EV V R+G Y+Q+Y GK V + ++ GTR+RF PD +
Sbjct: 119 ISVVNALSEWQEVEVLREGKRYYQRYEHGKAVCEVKELSYTGENNGECGTRVRFKPDSTI 178
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F +FD + +A R+RELAFLN L+++L+ E S E+ + + GG+ +++++N
Sbjct: 179 FGV-YEFDAHLLATRLRELAFLNRGLSLSLKDERSGEER----AFKYEGGITSFLEYINR 233
Query: 304 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+KK LH + F + D + + + LQ+ +D+Y++ + + N+++T++GG H+ G KA+LTR
Sbjct: 234 NKKVLHSPITFEGEKDDVKVAIGLQY-NDSYAENIFSFVNNVKTVEGGKHLSGFKAALTR 292
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
LN GK + +K ++L G+ VREGL +IS+++ P+FEGQTKT+LGN EV+ +V+
Sbjct: 293 VLNEYGKSNNMLKK--VNLDGDDVREGLAAVISLKLREPQFEGQTKTKLGNSEVKGIVES 350
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
V+E+L ++L+ +P D+I+ K+L A +A AA+ AR++VR+K + SLPGKLADCS
Sbjct: 351 FVREHLWDFLDENPKDGDAIIRKALEASRAREAARHAREIVRKKDSF-ADSLPGKLADCS 409
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + EI+IVEGDSAGGSAKQ RD+ FQAILP+RGKILNVE+ + K+ EI+ LI
Sbjct: 410 ERDPAKKEIYIVEGDSAGGSAKQARDKNFQAILPIRGKILNVEKARLDKILKSNEIRTLI 469
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G+ G+DF E RY+KIII++DADVDGAHIRTLLLTFFYRY + L IYV +
Sbjct: 470 TALGAGI-GDDFDMEKARYNKIIIMSDADVDGAHIRTLLLTFFYRYMQELVSANHIYVAL 528
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNP 660
PPLY V++GK+++Y + D E + +A IQ +KGLGEM P QLWETT+NP
Sbjct: 529 PPLYMVKKGKEIRYAFSDDEYVNILDELNVKEGDAGVKIQHYKGLGEMNPEQLWETTMNP 588
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
R +K + +EDAAE + +F+ LMG V+ R+ IQ +A ++NLD
Sbjct: 589 ATRGIKLVTLEDAAEVDWLFTVLMGEEVEPRRNFIQAHAKEVMNLD 634
>gi|383792025|ref|YP_005476599.1| type IIA topoisomerase subunit B [Spirochaeta africana DSM 8902]
gi|383108559|gb|AFG38892.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B
subunit [Spirochaeta africana DSM 8902]
Length = 636
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/646 (50%), Positives = 437/646 (67%), Gaps = 24/646 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ Y ++ IQ+L+GLEAVRKRP MYIGSTG GLHHLVYE++DN++DEA AGY S I V
Sbjct: 1 MQNNYSAQSIQILKGLEAVRKRPGMYIGSTGVDGLHHLVYEVVDNSIDEALAGYCSEITV 60
Query: 133 AL-------LADNS--IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ + DN IP D+HPA SA+E VLT LHAGGKF S Y VSGGLHGVG
Sbjct: 61 QIEPGNIIQVTDNGRGIPTDIHPAEGISAMEVVLTRLHAGGKFDKGS--YKVSGGLHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE EV V + G + QKY RG P + + + D GT +RF PD Q+
Sbjct: 119 VSVVNALSEWTEVRVHQKGEVHFQKYHRGVPEKPVEV----IGTTDITGTVVRFRPDDQI 174
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 303
F F + ++ R+RELAFLN + I R DS + +++ F GG+ E+VQ+LN
Sbjct: 175 FE-GTDFSFDILSTRLRELAFLNKGIRI--RIIDSRLPNIKQHDFIFEGGVAEFVQYLNR 231
Query: 304 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
K +H+ + F D + +++AL++ +D Y++ M + N+I T +GGTH+ G KA+LT
Sbjct: 232 SKNAIHEPPIYFEAVRDDVAMEIALEY-NDGYNENMFSFVNNINTREGGTHLVGFKAALT 290
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RTLN KKSK K D +LSG+ VREGLT ++SV+VP+P+FEGQTK +LGN EVR +V+
Sbjct: 291 RTLNDFAKKSKFAKKMDENLSGDDVREGLTAVVSVKVPDPQFEGQTKGKLGNSEVRGIVE 350
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
V E L + E +P V+D+I+ KS+ A KA +AA+RAR++ R+K L S+ LPGKLADC
Sbjct: 351 SQVNESLNYFFEQNPKVVDAIIEKSMMAAKARMAARRAREMTRRKGFLESTGLPGKLADC 410
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
S P ++E++IVEGDSAGGSAKQGR R FQAIL L GK+LNVE+ + + N+++Q +
Sbjct: 411 SERDPAKTELYIVEGDSAGGSAKQGRSREFQAILALWGKMLNVEKARQDKVLANDKLQPI 470
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I ALG G +F E LRYHKIII+ DADVDG+HIRTLLLTFFYRY ++G IY+
Sbjct: 471 ISALGASA-GNEFNVEKLRYHKIIIMADADVDGSHIRTLLLTFFYRYMTEALEKGYIYIA 529
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPS--NALYSIQRFKGLGEMMPVQLWETTLNP 660
+PPLYK+ GK V+Y + DAE + + + ++QR+KGLGEM P QLWETT+NP
Sbjct: 530 MPPLYKMWVGKDVRYAFTDAERDRTLAEMRQIHTSTINMQRYKGLGEMNPDQLWETTMNP 589
Query: 661 EQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 705
E R + ++ ++DA EA +FS LMG +V R++ I +NA + NLD
Sbjct: 590 ETRSIMRISMDDAVEAEEIFSCLMGEQVAPRRQFIEENALTVQNLD 635
>gi|160944260|ref|ZP_02091489.1| hypothetical protein FAEPRAM212_01769 [Faecalibacterium prausnitzii
M21/2]
gi|158444442|gb|EDP21446.1| DNA gyrase, B subunit [Faecalibacterium prausnitzii M21/2]
Length = 664
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/671 (47%), Positives = 428/671 (63%), Gaps = 32/671 (4%)
Query: 59 LSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNA 118
++ I T + Y + +IQVL+GLEAVRKRP MYIGSTG RGLHHLVYEI+DNA
Sbjct: 1 MAEEIITSTNADTVTDHEYNASEIQVLKGLEAVRKRPGMYIGSTGERGLHHLVYEIVDNA 60
Query: 119 VDEAQAGYASNIEVALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGS 169
+DEA AGY +IEV +L DN IP+D+ T A+ V T+LHAGGKFGG
Sbjct: 61 IDEALAGYCDHIEVKILKDNIIQVTDNGRGIPVDIQADTGLPAVTVVYTILHAGGKFGGE 120
Query: 170 SSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD 229
+SGY V+GGLHGVG SVVNA SE L V V RDG EY Q + RG P L C + ++
Sbjct: 121 NSGYKVAGGLHGVGASVVNACSEWLTVNVRRDGKEYEQTFRRGDPDGDLKC--IGTVAEG 178
Query: 230 RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE------------D 277
GTR+ F PD ++F +D +T+ R+RE +FLN + I L E +
Sbjct: 179 VTGTRVTFKPDPEMFKDTTVYDFDTLEKRLREESFLNAGVKITLTDERQLYTPVLEDGQE 238
Query: 278 SDPEKNQYNEYFFAGGLEEYVQWLNTDKK--PLH-DVVGFRKDVDGITIDLALQWCSDAY 334
DP + + GG++ +V +L +K LH +V+ + D ++ALQ+ S +Y
Sbjct: 239 GDP-CYRSEVMCYEGGIKSFVTYLGEKRKLEVLHPNVIYLKGQTDRGVAEIALQYNS-SY 296
Query: 335 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 394
++ +L +AN++ T DGGTH EG KASLTR N G+ +KDKD +LSG VREGL C+
Sbjct: 297 NELLLSFANNVNTPDGGTHEEGFKASLTRVFNDYGRSHGLLKDKDENLSGADVREGLICV 356
Query: 395 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 454
ISV++ EFEGQTK +LGN E+R +V V L E+ E +P V +I K+ A +A
Sbjct: 357 ISVKLQEAEFEGQTKAKLGNTEIRTLVSNMVYSKLMEFFEENPGVAKAIFEKATQAARAR 416
Query: 455 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 514
AAK+AR+LVR+KS L +S +PGKLADC P +EIFIVEGDSAGGSAK GRD QA
Sbjct: 417 AAAKKARELVRRKSALETSRMPGKLADCREKDPSRTEIFIVEGDSAGGSAKMGRDSAIQA 476
Query: 515 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 574
ILPL GK+LNVE+ +Y N+++ ++ ALG G+ G++F LRY K+ I+ DADVD
Sbjct: 477 ILPLWGKMLNVEKARADKIYGNDKLMPVVLALGCGI-GDEFDISKLRYDKVFIMADADVD 535
Query: 575 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 634
G+HI TL+LTFF+RY + L ++G +YV PPL+KV++G ++Y Y+DAE+ + P
Sbjct: 536 GSHICTLMLTFFFRYMRPLIEQGHVYVAQPPLFKVQKGNTIKYAYNDAEMAILSQEMPGA 595
Query: 635 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 694
+ R+KGLGEM P QLWETT+NP+ R++ Q+ IEDA +A+ F+ LMG +V+ R+
Sbjct: 596 ---KVNRYKGLGEMNPEQLWETTMNPDNRVIVQITIEDAEKADEAFTILMGDQVEPRRRF 652
Query: 695 IQNAANLVNLD 705
I+ A LD
Sbjct: 653 IETNAQYAKLD 663
>gi|288929798|ref|ZP_06423641.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 317 str. F0108]
gi|288328899|gb|EFC67487.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 317 str. F0108]
Length = 657
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/655 (47%), Positives = 428/655 (65%), Gaps = 33/655 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY SNIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCSNIEVTIN 69
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V+RDG Y Q+Y GKP+ + V D++GTR +FWPD +FTT
Sbjct: 128 VNALSSRMLSQVFRDGKIYQQEYETGKPLYPVKV----VGETDKRGTRQQFWPDPSIFTT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
+ + + IA R+RELA+LN + I L D E F A GL+E+V++++ +
Sbjct: 184 TV-YRWDIIASRMRELAYLNAGVKITLTDLRPDENGKTRTETFHAKDGLKEFVRYVDRHR 242
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
L DV+ + + I I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRT
Sbjct: 243 THLFDDVIYLKTEKQNIPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRT 301
Query: 365 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 420
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKAYADNDPVISKQIEKSKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 421 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 480
V Q+V E L YLE HP I K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 362 VQQAVGEALGYYLEEHPKEAKLICDKVILAATARIAARKARESVQRKNPMSGGGLPGKLA 421
Query: 481 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQ 540
DCS+ P+ SEIF+VEGDSAGGSAKQGRDR QAILPL+GKILNVE+ +++ E +
Sbjct: 422 DCSNKDPKTSEIFLVEGDSAGGSAKQGRDRYTQAILPLKGKILNVEKVQWHKVFEAESVM 481
Query: 541 NLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
N+I+++G+ GV+GED K+ + LRY KIII+TDADVDG+HI TL++T FYR+ +
Sbjct: 482 NIIQSIGVRFGVEGEDDKEANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPRIIQ 541
Query: 596 EGCIYVGVPPLYKVERGKQV-QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMP 650
EG +Y+ PPLY +V +YCY++ + + K N +QR+KGLGEM P
Sbjct: 542 EGHLYIATPPLYLCTYKNKVREYCYNEQQRQAFIDKYGEGQEDNKSIHVQRYKGLGEMNP 601
Query: 651 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++P +R+LKQ+ I++AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 602 EQLWETTMDPSKRLLKQVTIQNAADADEIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|124008106|ref|ZP_01692804.1| DNA gyrase, B subunit [Microscilla marina ATCC 23134]
gi|123986354|gb|EAY26167.1| DNA gyrase, B subunit [Microscilla marina ATCC 23134]
Length = 659
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 308/649 (47%), Positives = 431/649 (66%), Gaps = 29/649 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+ LEGLEAVR RP+MYIG G RGLHHL++E++DN++DEA AGY +I V +
Sbjct: 19 YSADNIRALEGLEAVRMRPSMYIGDVGVRGLHHLIWEVVDNSIDEALAGYCDHITVEVNT 78
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P + KSALE V+TVLHAGGKF + Y VSGGLHGVG+S V
Sbjct: 79 DNSITVTDNGRGIPTGFNSQMQKSALEVVMTVLHAGGKFDKDT--YQVSGGLHGVGVSCV 136
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L TV R+G + Q+Y +G P T + + D+ GT I F PD +FT A
Sbjct: 137 NALSTLLRATVHREGKIFQQEYKQGDPQTEVEV----IGESDKTGTVIHFVPDATIFT-A 191
Query: 248 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I++ + TI+ R+REL++LN +LT+ + + K ++ GGL E+V++L+ +
Sbjct: 192 IEYKYETISQRLRELSYLNKGIRLTMVDHRVKGEDGKALTEDFLSEGGLTEFVRYLDETR 251
Query: 306 KP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ L + + + G+ + +A + + +YS+ + Y N+I TI+GGTHI G + +LTRT
Sbjct: 252 QSFLPEPIYVEGEKSGVPVQVAFTY-NHSYSENVYSYVNNINTIEGGTHISGFRRALTRT 310
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L S K ++ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV VVD +
Sbjct: 311 LKSYADKEGMLEKAKVDVTGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGVVDNA 370
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E L+++LE +P SI+ K + A +A AA++AR++V++K+VL S LPGKLADCS
Sbjct: 371 TSEALSKFLEENPKQAKSIIQKVILAAQARHAARKAREMVQRKNVLSGSGLPGKLADCSE 430
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
P E+++VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ E +Y NEEI+N+I
Sbjct: 431 KDPGLCELYLVEGDSAGGSAKQGRDRNTQAILPLRGKILNVEKAQEYKIYDNEEIKNIIT 490
Query: 545 ALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
ALG+ +D K E LRYHKIII+TDADVDG+HIRTL+LTFF+RY + L + G +Y
Sbjct: 491 ALGVTFGKDDDDKALNMEKLRYHKIIIMTDADVDGSHIRTLILTFFFRYMRDLIESGYVY 550
Query: 601 VGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
+ +PP Y V++GK+ Y ++D + +K++ + +++ +QR+KGLGEM P QLWET
Sbjct: 551 IALPPFYLVKKGKKELYAWNDDDRDVAIKELAGNGKPESVH-VQRYKGLGEMNPEQLWET 609
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T+NPE R LKQ+ IE AA A+ +FS LMG V R+E I+ A N+D
Sbjct: 610 TMNPENRSLKQVTIESAAGADHLFSMLMGDDVPPRREFIEENAKYANVD 658
>gi|390630913|ref|ZP_10258886.1| DNA gyrase subunit B [Weissella confusa LBAE C39-2]
gi|390483880|emb|CCF31234.1| DNA gyrase subunit B [Weissella confusa LBAE C39-2]
Length = 648
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/644 (50%), Positives = 425/644 (65%), Gaps = 27/644 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN +DEA AG+A +I VA+
Sbjct: 16 YDASQIQVLEGLEAVRKRPGMYIGTTTSQGLHHLVWEIVDNGIDEALAGFADHITVAIEK 75
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D+ T K ALETV TVLHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVTDNGRGIPVDIQEKTGKPALETVFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 133
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD-RQGTRIRFWPDKQVFTT 246
NALS L+V V RDG Y + RG TT+ H PVD+ +GT + F PD +F
Sbjct: 134 NALSTELDVMVVRDGQGYAMDFERGHVKTTM--HSAPVDNAPVSRGTIVHFLPDPDIFRE 191
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD-PEKNQYNEYFFAGGLEEYVQWLNTDK 305
+D+ + R+RELAFLN L I++ +D PE ++ + GG++EYV++LN +K
Sbjct: 192 TTTYDYKILMNRVRELAFLNKGLRISITDNRADEPETESFH---YEGGIKEYVRFLNVNK 248
Query: 306 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
+ D V G +GI ++++LQ+ D Y ML + N+I T +GGTH G KA+L
Sbjct: 249 DVIFDDPIYVEGME---NGIEVEVSLQYTDD-YHSNMLSFTNNIHTYEGGTHETGFKAAL 304
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR +N +K+ +K+ D +LSG+ VREGLT I+SV+ PNP+FEGQTKT+LGN + R V
Sbjct: 305 TRVINDYARKNGQLKENDDALSGDDVREGLTAIVSVKHPNPQFEGQTKTKLGNSDARTAV 364
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
D+ E ++ +P V I+ K + A KA +AAKRAR+ R+KS L ++LPGKLAD
Sbjct: 365 DRMFSETFNRFMMENPAVAKQIVEKGILAGKARMAAKRAREATRKKSGLEIANLPGKLAD 424
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
+S PE SE+FIVEGDSAGGSAKQGR+R QAILP+RGKILNVE+ + NEEI++
Sbjct: 425 NTSKDPEISELFIVEGDSAGGSAKQGRERLTQAILPIRGKILNVEKASLDKILANEEIRS 484
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
L A+G G G +F +YHK+II+TDADVDGAHIRTLLLT YRY + L D G IY+
Sbjct: 485 LFTAMGTGF-GNEFDVTKAKYHKLIIMTDADVDGAHIRTLLLTLIYRYMRPLLDAGYIYI 543
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY+V +GK VQY D EL+ + + P++ IQR+KGLGEM QLWETT++P
Sbjct: 544 AQPPLYQVRQGKFVQYLDSDEELEALLPTLPASPKPVIQRYKGLGEMDAEQLWETTMDPS 603
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
R L ++ ++DA +A+ VFS LMG +V+ R+E I+ A LD
Sbjct: 604 VRRLLRVEMDDAVDADQVFSMLMGDKVEPRREFIEENAQYAELD 647
>gi|221632838|ref|YP_002522060.1| DNA gyrase subunit B [Thermomicrobium roseum DSM 5159]
gi|221156882|gb|ACM06009.1| DNA gyrase, B subunit [Thermomicrobium roseum DSM 5159]
Length = 636
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/640 (50%), Positives = 431/640 (67%), Gaps = 23/640 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVR+RP MYIGST RGLHHL+YEI+DN+VDEA AGY IEV +
Sbjct: 8 YDASAIQVLEGLEAVRRRPGMYIGSTDIRGLHHLIYEIVDNSVDEALAGYCDRIEVTIHR 67
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D+HP KSALE ++T LHAGGKFGG S LHGVG SVV
Sbjct: 68 DGSVRVWDDGRGIPVDIHPKVGKSALEVIMTTLHAGGKFGGGGYKVSGG--LHGVGASVV 125
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEVTV RDG YHQ+Y RG PVT + + + D GT F PD+ +F +
Sbjct: 126 NALSEWLEVTVRRDGKIYHQRYERGVPVTPV--ETIGETTPDDHGTETVFLPDRLIFRS- 182
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
+ + + + R RE+A+L LTI E +D + ++F GG+ +V+ LN K+
Sbjct: 183 LDYQSDVLLQRFREVAYLTSGLTIHFVDERTDLDMT----FYFEGGIVSFVRHLNRTKEV 238
Query: 308 LHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
L + +++ +G +++A+Q+ +D Y+++ +AN+I TIDGGTH+ G KA+LTR +N
Sbjct: 239 LQPQPFYVKREQNGCLVEVAIQY-TDGYAESTHAFANNINTIDGGTHVTGFKAALTRAIN 297
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
++ +K+ D +LSGE VREGLT IISV +P P+FEGQTKT+LGN EV +V V
Sbjct: 298 EYARRHGLLKENDPNLSGEDVREGLTAIISVMLPEPQFEGQTKTKLGNAEVAGIVQSIVY 357
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E T YLE HP + I+ K L+A +A AA++AR+LV++K L + SLPGKLADC+
Sbjct: 358 ESFTSYLEEHPAIARRIIEKCLTAARAREAARKARELVQRKGALDTFSLPGKLADCTERD 417
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
P ++E++IVEGDSAGGSAKQGRDRRFQA+LPLRGKILNVE+ M NEEI+ LI AL
Sbjct: 418 PAKAELYIVEGDSAGGSAKQGRDRRFQAVLPLRGKILNVEKARLDRMLHNEEIRALITAL 477
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ G+ + + LRYH++I++TDADVDGAHIRTLLLTFF+RY + L +G +Y+ PPL
Sbjct: 478 GTGI-GDQYDRSKLRYHRVILMTDADVDGAHIRTLLLTFFFRYLEGLIIDGHLYIAQPPL 536
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+++ GK+V Y Y D E + + + IQR+KGLGEM P QLWETT++P +R L
Sbjct: 537 YRLQSGKEVHYVYSDEERDAILNR-GDGKTWDIQRYKGLGEMNPEQLWETTMDPARRTLL 595
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
Q+ IEDA A+ F+ LMG+ V RK IQ A V NLD
Sbjct: 596 QVTIEDAVRADETFNMLMGSAVPPRKRFIQAHAREVRNLD 635
>gi|358465989|ref|ZP_09175862.1| hypothetical protein HMPREF9093_00323 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069504|gb|EHI79409.1| hypothetical protein HMPREF9093_00323 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 639
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/642 (48%), Positives = 429/642 (66%), Gaps = 21/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKIL 65
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP D+HP KSALE VLT+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTILHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ LEV V ++ Y+QKY RGKP + ++ + GT +RF D +F T
Sbjct: 124 VNALSDWLEVEVRKERNVYYQKYHRGKPEEDV--KIVGSCEESEHGTTVRFKADGDIFET 181
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I +++ T++ R++ELA+LN LTI L D E+ + Y F GG+ +++ + ++
Sbjct: 182 LI-YNYFTLSNRLKELAYLNRGLTITL--SDLRKEEKKEEIYKFDGGILDFLNEIVKEEA 238
Query: 307 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 365
+ D + + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 239 TIVDKPFYVSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 297
Query: 366 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 425
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLLGNDIREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 357
Query: 426 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 485
L +LE +P + ++ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SNGLKIFLEDNPAITKIVIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 486 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 545
EE EIFIVEGDSAGGSAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A
Sbjct: 418 KAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTA 477
Query: 546 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 605
G + GE F LRY KII++TDADVDGAHIRTL+LTF YRY K L EG IY+ PP
Sbjct: 478 FGTSI-GETFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPP 536
Query: 606 LYKVERGKQVQYCYDDAELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
LYKV GKQ+ Y Y+D ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+
Sbjct: 537 LYKVSSGKQIIYAYNDLELKNVLGQMNEENKKYTIQRYKGLGEMNPEQLWETTMNPDGRL 596
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L ++ I++A EA+++F LMG +V+ R+E I+ A V N+D
Sbjct: 597 LLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNID 638
>gi|322385201|ref|ZP_08058848.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
cristatus ATCC 51100]
gi|417921915|ref|ZP_12565405.1| DNA gyrase, B subunit [Streptococcus cristatus ATCC 51100]
gi|321270825|gb|EFX53738.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
cristatus ATCC 51100]
gi|342833800|gb|EGU68080.1| DNA gyrase, B subunit [Streptococcus cristatus ATCC 51100]
Length = 649
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/657 (47%), Positives = 442/657 (67%), Gaps = 26/657 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+A++I+V + DNSI P+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFATHIQVFIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
LHGVG SVVNALS L+V V+++G ++Q+Y RG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGQVVADLEI----IGETDRTGTTV 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 296 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ +
Sbjct: 413 LPGKLADCSSNNPQETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKIL 472
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT YRY K +
Sbjct: 473 ANEEIRSLFTAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLIYRYMKPVL 531
Query: 595 DEGCIYVGVPPLYKVERGKQVQY-----CYDDAELKKVKSSFPSN-ALYSIQRFKGLGEM 648
+ G +Y+ PP+Y V+ G +V+ + EL+ + + +IQR+KGLGEM
Sbjct: 532 EAGYVYIAQPPIYGVKVGSEVKEYIQPGANQEEELQAALEHYSEGRSKPTIQRYKGLGEM 591
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT+NPE R++ ++ ++DAAEA+ +F LMG RV+ R++ I+ A LD
Sbjct: 592 DDHQLWETTMNPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRRDFIEKNAVYSTLD 648
>gi|408674304|ref|YP_006874052.1| DNA gyrase, B subunit [Emticicia oligotrophica DSM 17448]
gi|387855928|gb|AFK04025.1| DNA gyrase, B subunit [Emticicia oligotrophica DSM 17448]
Length = 657
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/649 (48%), Positives = 440/649 (67%), Gaps = 29/649 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+E IQVLEGLEAVRKRPAMYIG G +GLHHL++E++DN++DEA AG+ I V +
Sbjct: 17 YGAENIQVLEGLEAVRKRPAMYIGDIGAKGLHHLIWEVVDNSIDEALAGHCDTINVTINP 76
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNS IP +H KSALE V+TVLHAGGKF + Y VSGGLHGVG+S V
Sbjct: 77 DNSVTVKDNGRGIPTGMHSKEKKSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCV 134
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L V V R+G + Q+YS GKP+ V + + + GT++ F PD +FT
Sbjct: 135 NALSTHLRVEVHREGKVFEQEYSIGKPLYP----VREIGTAEDTGTQVTFKPDNSIFTVT 190
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 305
++ + T+A R+REL+FLN +TI L + D + N + F++ GGL E+V +++ +
Sbjct: 191 -EYKYETVANRLRELSFLNKGITIVLTDLREIDEDGNALTDTFYSVGGLAEFVSYIDAGR 249
Query: 306 KPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ L F + + DG+ +D+A+ + + +YS+ + + N+I T +GGTH+ G + +LTRT
Sbjct: 250 ERLIPEPMFMEGNKDGVPVDVAMLYNT-SYSENVYSFVNNINTHEGGTHVSGFRMALTRT 308
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
L S +KS + + I +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV V
Sbjct: 309 LKSYAEKSGILAKEKIDISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVTSAVSAC 368
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
V E L YLE HP I+ K + A KA +AAK+AR++V++K+VL + LPGKLADCS
Sbjct: 369 VAEMLENYLEEHPKEARIIVDKVILAAKARIAAKKAREMVQRKNVLVGTGLPGKLADCSE 428
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
+ P E+++VEGDSAGGSAKQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+
Sbjct: 429 SDPSICEVYLVEGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAQEFRIYENEEIKNIFT 488
Query: 545 ALG--LGVKGED--FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIY 600
ALG +G G++ + LRYHKIII+TDAD+DG+HIRTL+LTFFYRY K L + G IY
Sbjct: 489 ALGVQIGRDGDERALNTDKLRYHKIIIMTDADIDGSHIRTLILTFFYRYMKELIERGYIY 548
Query: 601 VGVPPLYKVERGKQVQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 656
+ PPLY V++GK+ +YC+ + + +K++ + +++ IQR+KGLGEM P QLWET
Sbjct: 549 IAQPPLYLVKKGKEEEYCWTEEQRELAVKRLAGAGREDSV-GIQRYKGLGEMNPEQLWET 607
Query: 657 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
T+ P++R LKQ+ +E AAEA+ +F+ LMG V R++ I+ A +D
Sbjct: 608 TMRPDKRTLKQVTVESAAEADHLFAMLMGDEVGPRRDFIERNAKYAKVD 656
>gi|374597859|ref|ZP_09670861.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|423323806|ref|ZP_17301648.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
gi|373909329|gb|EHQ41178.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|404609024|gb|EKB08449.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
Length = 646
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/646 (46%), Positives = 429/646 (66%), Gaps = 25/646 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+ I V +
Sbjct: 9 NYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTINVVIN 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+H SALE V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 69 EDNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSC 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ L TV+RDG Y Q+YS+GK + + + D++GT + F PD +FT
Sbjct: 127 VNALSDLLRATVYRDGKIYEQEYSKGKALFPVKV----IGETDKRGTTVMFKPDPTIFTQ 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 304
+++ ++T+A R+RELAFLN LTI L + D + Q +E FF+ GL+E++++L+ +
Sbjct: 183 TLEYSYDTLASRLRELAFLNKGLTITLTDAREVDEKGQQKSEVFFSKEGLKEFIKFLDGN 242
Query: 305 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
+ P+ ++V+ D + +++AL + +D YS+ + Y N+I T +GGTH++G + LTR
Sbjct: 243 RTPIINEVIWMESDKGDVPVEVALVY-NDTYSENIYSYVNNINTHEGGTHLQGFRMGLTR 301
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
TL S + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV V Q
Sbjct: 302 TLKKYADASGLLDKLKFEISGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVSQ 361
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
+V E L YLE +P+ I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS
Sbjct: 362 AVAEMLENYLEENPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMTGGGLPGKLSDCS 421
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
P + E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ ++++EEI+N+
Sbjct: 422 EQDPTKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMGHKVFESEEIKNIF 481
Query: 544 RALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 599
ALG+ + E+ K E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L + G +
Sbjct: 482 TALGVTIGTEEDSKALNLEKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIENGHV 541
Query: 600 YVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLN 659
++ PPLY V++G++ Y + D E + + + S+QR+KGLGEM QLWETT+N
Sbjct: 542 FIATPPLYMVKKGQRKVYAWSDEERIDLMEEMGNGS--SVQRYKGLGEMNAEQLWETTMN 599
Query: 660 PEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
PE R+L+Q+ I+D EA++VFS LMG V R++ I+ A +D
Sbjct: 600 PEHRILRQVRIDDLKEADLVFSMLMGDEVPPRRDFIEKNATYAKID 645
>gi|262283011|ref|ZP_06060778.1| DNA gyrase subunit B [Streptococcus sp. 2_1_36FAA]
gi|262261263|gb|EEY79962.1| DNA gyrase subunit B [Streptococcus sp. 2_1_36FAA]
Length = 649
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/657 (48%), Positives = 442/657 (67%), Gaps = 26/657 (3%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ S+ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQSQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
G+AS+I+V + DNSI P+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
LHGVG SVVNALS L+V V+++G + Q+Y+RG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVKVYKNGQIHFQEYTRGQVVADLKV----IGDTDRTGTTV 175
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 295
F PD ++FT ++FD + RI+ELAFLN L+I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRIQELAFLNRGLSISITDKRDGME--QSKDYHYEGGIA 233
Query: 296 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 354
YVQ++N +K+ + D + +++ IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKEVIFDNPIYTDGEMEDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 355 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 414
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 415 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 474
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 475 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 534
LPGKLADCSS P E+E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ +
Sbjct: 413 LPGKLADCSSNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKIL 472
Query: 535 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
NEEI++L A+G G G DF RY K++I+TDADVDGAHIRTLLLT YRY K +
Sbjct: 473 ANEEIRSLFTAMGTGF-GADFDISKCRYQKLVIMTDADVDGAHIRTLLLTLIYRYMKPVL 531
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYD---DAELK---KVKSSFPSNALYSIQRFKGLGEM 648
+ G +Y+ PP+Y V+ G +V+ D E+K + + SIQR+KGLGEM
Sbjct: 532 EAGYVYIAQPPIYGVKVGSEVKEYIQPGADQEIKLQEALARYSEGRSKPSIQRYKGLGEM 591
Query: 649 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
QLWETT++PE R++ ++ ++DAAEA+ +F LMG RV+ R+E I+ A LD
Sbjct: 592 DDHQLWETTMDPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLD 648
>gi|227500982|ref|ZP_03931031.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus tetradius ATCC
35098]
gi|227216755|gb|EEI82153.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus tetradius ATCC
35098]
Length = 641
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/642 (49%), Positives = 435/642 (67%), Gaps = 33/642 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + I+VLEGLE VR RP MYIGST RGLHHLVYE++DN+VDEA AG I+V +
Sbjct: 13 NYDAGNIRVLEGLEPVRLRPGMYIGSTSQRGLHHLVYEVVDNSVDEALAGRCDYIKVTID 72
Query: 136 ADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DN IP+ HP T+KS LETVLTVLHAGGKF S Y VSGGLHGVG+SV
Sbjct: 73 KDNVVSVEDDGSGIPVKEHPTTHKSTLETVLTVLHAGGKF--DDSAYKVSGGLHGVGVSV 130
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALSE L V RDG Y +++RG+ +T + + GT+I F D ++F T
Sbjct: 131 VNALSEYLIAEVKRDGHIYKMEFARGE----VTKDIEVIGDTVETGTKITFKADGEIFDT 186
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 306
I +D + R RE+AFLN + I E D + + + F GG+ E+V +LN +K
Sbjct: 187 TI-YDRTILENRFREMAFLNKGVEIQFEDEREDFKTS----FKFEGGISEFVAYLNRNKD 241
Query: 307 PLHDVV----GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
P+ +++ GF++D + ++ A Q+ +DAYS+ +L YAN+I+T +GG+H+ G+++SLT
Sbjct: 242 PIMEMIPNFDGFQEDTE---VEFAFQY-TDAYSENILSYANNIQTPEGGSHLAGLRSSLT 297
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
RT+N +K +KD + +L GE +REG+T IISV++ +P+FEGQTK++LGN EVR VD
Sbjct: 298 RTVNDYARKYNFLKDNEDNLQGEDIREGITAIISVKITDPQFEGQTKSKLGNSEVRGAVD 357
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
+ E+L +LE +P +I+ K+L++ +A AA++ARDL R++S+L S++LPGKLADC
Sbjct: 358 TFISEHLANFLEENPKPAKAIIDKALASRRAREAARKARDLTRKRSILDSATLPGKLADC 417
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
ST E+EIFIVEG+SAGGSAK GRD R QAILPLRGKI+NVE+ + +EEI+N+
Sbjct: 418 QSTDIGENEIFIVEGNSAGGSAKGGRDNRIQAILPLRGKIMNVEKAHLDRVLNSEEIKNM 477
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I A G G+ G++F E LRY KIII+TDADVDGAHIRTLLLTFFYRY K L D+G +YV
Sbjct: 478 ITAFGTGI-GKEFDLEKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMKDLIDKGHVYVA 536
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
+PPLY++ GK+ +Y Y D E KV + Y I R+KGLGEM QLWETT++P++
Sbjct: 537 LPPLYRISVGKKERYVYSDDERDKVIKELGVDN-YKINRYKGLGEMNAEQLWETTMDPDR 595
Query: 663 RMLKQLVIED--AAEANVVFSSLMGARVDTRKELIQNAANLV 702
R+L + V+ED + + F+ LMG +V+ R+ IQ A V
Sbjct: 596 RVLLR-VVEDMESTTTDDTFALLMGEKVEPRRNFIQENAKYV 636
>gi|329925092|ref|ZP_08280036.1| DNA gyrase, B subunit [Paenibacillus sp. HGF5]
gi|328940211|gb|EGG36543.1| DNA gyrase, B subunit [Paenibacillus sp. HGF5]
Length = 634
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/642 (50%), Positives = 429/642 (66%), Gaps = 25/642 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG +IE+ +
Sbjct: 5 TYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEAMAGICDHIEIIVH 64
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+ + KS LE V+TVLHAGGKFGG S LHGVG+SV
Sbjct: 65 EDNSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSV 122
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS + V V RDG Y Q+Y RG P + + D GT + F PD ++FT
Sbjct: 123 VNALSSKVVVQVKRDGNIYQQEYHRGVPQYDIKI----IGDSDDHGTTVTFLPDPEIFTE 178
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 305
+D+ T+ RIRELAFLN + + L E + ++YF + GG+ EYV++LN K
Sbjct: 179 TTVYDYTTLLTRIRELAFLNKGIALTLTDE-----RTGASDYFKYEGGIIEYVKFLNEKK 233
Query: 306 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
+ LH D + D I ++++LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR
Sbjct: 234 EALHEDPIYVEGSRDNIQVEVSLQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRI 292
Query: 365 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 424
+N +K+ +KD + +LSG+ VREGLT IISV+VP P+FEGQTKT+LGN EVR +V+
Sbjct: 293 INDYARKTGLIKDNNNNLSGDDVREGLTAIISVKVPEPQFEGQTKTKLGNSEVRGIVESL 352
Query: 425 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 484
E L E+L+ +P V IL K+L A +A AA++AR++ R+KS L S+LPGKLADCSS
Sbjct: 353 FAEKLQEFLQENPAVSRRILEKALQASRAREAARKAREMTRRKSALEVSALPGKLADCSS 412
Query: 485 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 544
SE++IVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I
Sbjct: 413 KDASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAIIT 472
Query: 545 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 604
ALG G+ EDF RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G IY+ P
Sbjct: 473 ALGTGI-AEDFDLSKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQP 531
Query: 605 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 664
PL+K+ER K ++Y + E ++ F N ++QR+KGLGEM QLWETT++PE R
Sbjct: 532 PLFKIERNKVIRYAGSERERDEIIKEFGENVKINVQRYKGLGEMNAGQLWETTMDPESRT 591
Query: 665 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
+ Q+ IEDA A+ +F +LMG V+ R++ IQ A V NLD
Sbjct: 592 MLQVTIEDAILADTLFDTLMGDNVEPRRDFIQEHAKSVRNLD 633
>gi|78707345|gb|ABB46478.1| DNA gyrase subunit B [Acholeplasma equifetale]
gi|78707347|gb|ABB46479.1| DNA gyrase subunit B [Acholeplasma equifetale]
Length = 588
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/602 (50%), Positives = 404/602 (67%), Gaps = 25/602 (4%)
Query: 91 VRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADN---------SIP 141
VRKRP MYIGSTG RGLHHLV+EI+DN++DEA AGYA +IE+ +L DN IP
Sbjct: 1 VRKRPGMYIGSTGERGLHHLVWEIVDNSIDEALAGYADHIEIEVLKDNVIRVSDNGRGIP 60
Query: 142 IDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRD 201
+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LS V + +D
Sbjct: 61 VDIHPKTGRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSVWYVVEIHKD 118
Query: 202 GMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRE 261
G Y QKY RG P L + +R GT F D +FT +D T+ RI++
Sbjct: 119 GKIYEQKYERGIPAYDLK----ELGETNRTGTITTFKADPLIFTETTVYDIETLRTRIQQ 174
Query: 262 LAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD 319
LAFLN +TI+L DS E + Y E F + GG+ EYV++LN +KK +H D++ F K+ D
Sbjct: 175 LAFLNRGITISL--SDSRDENHIYQETFKYDGGIIEYVKFLNQNKKTIHPDIIYFEKEQD 232
Query: 320 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 379
G+T+++A+Q+ D Y+ + + N+I T +GG H +G K +LTR ++ K KD
Sbjct: 233 GVTVEVAMQYV-DTYTPNIHSFTNNISTTEGGMHEDGYKMALTRVISRYADDMKAKKDD- 290
Query: 380 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 439
++ GE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q QE L +L +P
Sbjct: 291 -AIIGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQVTQEALERFLLENPQQ 349
Query: 440 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 499
SI+ K + A +A +A+++A++L R+KS L KLADC S PE+SE+FIVEGDS
Sbjct: 350 AKSIVEKVIEATRARVASRKAKELARRKSPLDQLDFASKLADCRSKDPEKSELFIVEGDS 409
Query: 500 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 559
AGGSAKQGRD FQAILPLRGK+LNVE+ M KN+EI N+I+A+G G+ E+F
Sbjct: 410 AGGSAKQGRDSEFQAILPLRGKVLNVEKARIDTMLKNKEIINIIQAIGTGI-SEEFDISK 468
Query: 560 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 619
LRYHKI+I+TDADVDGAHIRTLLLTFF+R+ + L + G IY PPLYKV G+ V+Y Y
Sbjct: 469 LRYHKIVIMTDADVDGAHIRTLLLTFFFRHMRPLIENGHIYAAQPPLYKVSYGRNVKYAY 528
Query: 620 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 679
D EL ++ S + ++QR+KGLGEM QLW+TT+NPE R L Q+ ++DA EA+ +
Sbjct: 529 SDEELNEITSKLETKP--TLQRYKGLGEMNYEQLWDTTMNPETRTLLQIQLDDAIEADQI 586
Query: 680 FS 681
F+
Sbjct: 587 FT 588
>gi|339626334|ref|YP_004717977.1| DNA topoisomerase IV subunit B [Sulfobacillus acidophilus TPY]
gi|379005805|ref|YP_005255256.1| DNA gyrase subunit B [Sulfobacillus acidophilus DSM 10332]
gi|339284123|gb|AEJ38234.1| DNA topoisomerase IV, B subunit [Sulfobacillus acidophilus TPY]
gi|361052067|gb|AEW03584.1| DNA gyrase subunit B [Sulfobacillus acidophilus DSM 10332]
Length = 638
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 327/645 (50%), Positives = 439/645 (68%), Gaps = 24/645 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG I+
Sbjct: 4 PSTPEYNENQIQVLEGLEAVRKRPGMYIGSTDVRGLHHLVYEIVDNSIDEALAGVCDRIQ 63
Query: 132 VALLADN---------SIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 182
V L D +P +HP LE VLT+LHAGGKFGG S LHGV
Sbjct: 64 VTLYRDGRVGVRDNGRGVPTGIHPKVGIPTLEVVLTMLHAGGKFGGGGYKVSGG--LHGV 121
Query: 183 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 242
GLSVVNALS+ L T +G + Q Y++GKP+ LT + D G + F PD
Sbjct: 122 GLSVVNALSKELTATSRFNGGIFVQHYAQGKPLDALT----RIGDTDETGFEVVFLPDPD 177
Query: 243 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 302
+F ++F TIA R+RE AFLN + + L+ E S E Y + GG+ +VQ+LN
Sbjct: 178 IFE-EVRFSFETIANRLREQAFLNSGVLLELKDEASGREM----RYHYTGGVVSFVQYLN 232
Query: 303 TDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
++ +H + F + DG+ ++ ALQ+ +D+Y++T+ +AN+IRT++GG+H G KA+L
Sbjct: 233 LNRDVIHPKPIAFSAERDGVFVETALQY-NDSYTETLFTFANTIRTLEGGSHEAGFKAAL 291
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
TR N G+K +KD D +LSG+ VREGLT I+SV++P P+FEGQTKT+LGN EVR +
Sbjct: 292 TRVCNDYGRKLGLLKDADNNLSGDDVREGLTMILSVKLPEPQFEGQTKTKLGNSEVRGIT 351
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
+ V E L+ Y E +P + IL K+++A +A AA++AR+L R+KSVL SSSLPGKL D
Sbjct: 352 EAIVAEGLSTYFEENPSIAKRILEKAIAAARAREAARKARELTRRKSVLESSSLPGKLTD 411
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
C+S P ESE+F+VEGDSAGGSAKQGRDR+FQA+LPLRGKILNVER + NEEI+
Sbjct: 412 CTSKDPAESELFLVEGDSAGGSAKQGRDRQFQAVLPLRGKILNVERARLDKILGNEEIRA 471
Query: 542 LIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYV 601
+I A+G G+ G++F RYH+I+I+TDADVDG+HIRTLLLTFFYRY L + G +Y+
Sbjct: 472 MITAIGTGI-GDEFDLTKARYHRIVIMTDADVDGSHIRTLLLTFFYRYMTPLIEAGYVYI 530
Query: 602 GVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPE 661
PPLY V++GKQ +Y YDDA L+++ + + +IQR+KGLGEM QL +TT+NPE
Sbjct: 531 AQPPLYLVKKGKQERYLYDDAALEQLLNEWGRGNDITIQRYKGLGEMNAEQLRDTTMNPE 590
Query: 662 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
R L ++ +EDAA A+ +F+ LMG +V++R++ IQ A+LV NLD
Sbjct: 591 TRTLLRVELEDAAAADWIFTVLMGDKVESRRDFIQEHAHLVRNLD 635
>gi|372211058|ref|ZP_09498860.1| DNA gyrase subunit B [Flavobacteriaceae bacterium S85]
Length = 645
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/648 (46%), Positives = 427/648 (65%), Gaps = 31/648 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+ I V +
Sbjct: 9 YSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTISVFINE 68
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
+NSI P+ +H SALE V+T + AGGKF S Y VSGGLHGVG+S V
Sbjct: 69 NNSITVQDNGRGIPVGIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCV 126
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
NALS+ ++ TV R+G + Q+Y RGK PV T V ++ GT + F PDK +F
Sbjct: 127 NALSDHVKATVHREGKIWEQEYERGKALYPVKT-------VGDSNKTGTEVTFIPDKSIF 179
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLN 302
++++ T+A R+RELA+LN +T+ L K D E N +E F + GL E+V++L+
Sbjct: 180 QQTTEYNYETLANRMRELAYLNKGITVTLTDKRHKDDEGNFISETFHSEDGLAEFVKYLD 239
Query: 303 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 361
++ L DV+ + +GI +++A+ + + +Y++ + Y N+I T +GGTH+ G + L
Sbjct: 240 GTREQLTADVISMEGEKNGIPVEVAMVYNT-SYAENLHSYVNNINTHEGGTHLSGFRRGL 298
Query: 362 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 421
T TL S + +SG+ REGLT I+SV+V P+FEGQTKT+LGN EV V
Sbjct: 299 TTTLKKYADASGMLSKLKFDVSGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVSAAV 358
Query: 422 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 481
Q+V E LT+YLE HPD +I+ K + A +A AA +AR++V++K+V+ LPGKL+D
Sbjct: 359 SQAVSEMLTDYLEEHPDDAKTIVQKVILAAQARHAATKAREMVQRKTVMSIGGLPGKLSD 418
Query: 482 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQN 541
CS T PE+ EIF+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N
Sbjct: 419 CSETDPEKCEIFLVEGDSAGGTAKQGRDREFQAILPLRGKILNVEKAMQHKVFENEEIKN 478
Query: 542 LIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 597
+ ALG+ + E+ K LRYHK++I+ DADVDG+HI TL+LTFF+RY + + ++G
Sbjct: 479 MFTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADVDGSHIATLILTFFFRYMREMVEQG 538
Query: 598 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 657
+Y+ PPLY V++G + +Y +DD + + F +A SIQR+KGLGEM QLW+TT
Sbjct: 539 YVYIATPPLYLVKKGNKKEYAWDDNQRDMINMKFGGSA--SIQRYKGLGEMNAEQLWDTT 596
Query: 658 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
+NPE R L+Q+ I+ EA+ VFS LMG V R+E I+ A N+D
Sbjct: 597 MNPEFRTLRQVSIDSDVEADRVFSMLMGDEVPPRREFIEKNAKYANID 644
>gi|373110591|ref|ZP_09524857.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 10230]
gi|423130304|ref|ZP_17117979.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 12901]
gi|423133984|ref|ZP_17121631.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 101113]
gi|371642325|gb|EHO07893.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 10230]
gi|371645840|gb|EHO11361.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 12901]
gi|371647755|gb|EHO13251.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 101113]
Length = 646
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/650 (46%), Positives = 428/650 (65%), Gaps = 33/650 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 9 NYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTISVTIN 68
Query: 136 ADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 186
DNSI P+D+H SALE V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 69 EDNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSC 126
Query: 187 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 246
VNALS+ L TV+R+G Y Q+YSRGK + + + D++GT + F PD +FT
Sbjct: 127 VNALSDLLRATVYREGKIYEQEYSRGKALFPVKV----IGETDKRGTSVTFKPDHTIFTQ 182
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALR-----KEDSDPEKNQYNEYFFAG-GLEEYVQW 300
++F ++T+AGR+REL+FLN L I L +E+ +P+ +E FF+ GL+E++++
Sbjct: 183 TLEFSYDTLAGRLRELSFLNKGLKITLTDKRVIEENGEPK----HEVFFSKEGLKEFIKF 238
Query: 301 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
L+ + P+ DV+ D I +++AL + +D Y++ + Y N+I T +GGTH++G +
Sbjct: 239 LDGSRVPIIEDVISMELDKGEIPVEVALVY-NDTYAENIYSYVNNINTHEGGTHLQGFRM 297
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTL S + ++G+ REGLT I+SV+V P+FEGQTKT+LGN EV
Sbjct: 298 GLTRTLKKYADASGMLDKLKFEITGDDFREGLTAIVSVKVMEPQFEGQTKTKLGNREVVS 357
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
V Q+V E L YLE HP+ I+ K + A +A AAK+AR++V++K+V+ LPGKL
Sbjct: 358 PVSQAVAEMLENYLEEHPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKL 417
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
+DCS + E+F+VEGDSAGG+AKQGRDR FQAILPLRGKILNVE+ +++NEEI
Sbjct: 418 SDCSEQDASKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMGHKVFENEEI 477
Query: 540 QNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 595
+N+ ALG+ + E+ K E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L +
Sbjct: 478 KNIFTALGVTMGTEEDSKALNLEKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIE 537
Query: 596 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 655
G +Y+ PPLY V++G++ +Y + D E ++ S + S+QR+KGLGEM QLW+
Sbjct: 538 NGYVYIATPPLYMVKKGQRKEYAWTDEERLELMEKMGSGS--SVQRYKGLGEMNAEQLWD 595
Query: 656 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
TT+NPE R+L+Q+ I+ EA+ VFS LMG V R++ I+ A +D
Sbjct: 596 TTMNPEHRILRQVTIDSLQEADRVFSMLMGDEVPPRRDFIEKNATYAKID 645
>gi|406838853|ref|ZP_11098447.1| DNA gyrase subunit B [Lactobacillus vini DSM 20605]
Length = 650
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/643 (49%), Positives = 425/643 (66%), Gaps = 19/643 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG+A I V
Sbjct: 15 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSSQGLHHLVWEIIDNGIDEALAGFADEINVI 74
Query: 134 LLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 184
+ +DNSI P+D+ P T + ALETV T+LHAGGKFGG S LHGVG
Sbjct: 75 VESDNSITVKDNGRGIPVDIQPKTGRPALETVFTILHAGGKFGGGGYKVSGG--LHGVGA 132
Query: 185 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 244
SVVNALS L+V V R+ Y + RGK ++ + GT + F PD +F
Sbjct: 133 SVVNALSTELDVKVKRNSKIYAMDFKRGK--VNHEMQIIGDCGEHEHGTIVHFLPDPDIF 190
Query: 245 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 304
T +D N + RIRELAFLN L I ++ D EK ++ + GG+ YV++LN +
Sbjct: 191 TETTTYDINILTTRIRELAFLNKGLRITIK--DLRSEKPTLQQFHYEGGIRHYVEFLNKN 248
Query: 305 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 363
K+ L + V + +GIT++++LQ+ +D +S+ +L +AN+I T +GGTH G K +LTR
Sbjct: 249 KEALFPEPVYVEGEQNGITVEVSLQYTNDFHSN-LLTFANNIHTYEGGTHEAGFKTALTR 307
Query: 364 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 423
+N KK+K +KD D +LSGE VREG+T ++S++ P+P+FEGQTKT+LGN + R V D
Sbjct: 308 VINDYAKKNKLLKDSDDNLSGEDVREGMTAVVSIKHPDPQFEGQTKTKLGNSDARTVTDH 367
Query: 424 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 483
E+ ++++ +P V I+ K + A KA +AAKRAR++ R+K+ L S+LPGKLAD +
Sbjct: 368 LFSEHFSKFMLENPAVARKIVDKGILASKARVAAKRAREVTRKKNGLEISNLPGKLADNT 427
Query: 484 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 543
S P SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NEEI++L
Sbjct: 428 SKDPSISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKATLDRILANEEIRSLF 487
Query: 544 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 603
ALG G GEDF + YHK+II+TDADVDGAHIRTLLLT FYR+ + + D G +Y+
Sbjct: 488 TALGTGF-GEDFDIDKANYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPMIDHGYVYIAQ 546
Query: 604 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 663
PPLY+V +GK ++Y D EL +V IQR+KGLGEM QLWETT++PE R
Sbjct: 547 PPLYQVRQGKMIKYIDTDEELDEVVGQLSPAPKPVIQRYKGLGEMDAEQLWETTMDPENR 606
Query: 664 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 705
L Q+ + DA EAN VF LMG +V+ R+E I+ A V NLD
Sbjct: 607 RLLQVELSDAEEANEVFEMLMGDKVEPRREFIEKNATFVENLD 649
>gi|304383575|ref|ZP_07366034.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii
DSM 16973]
gi|304335099|gb|EFM01370.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii
DSM 16973]
Length = 657
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/668 (47%), Positives = 434/668 (64%), Gaps = 37/668 (5%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A KEN Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA
Sbjct: 1 MAENQTKEN----NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEA 56
Query: 123 QAGYASNIEVALLADNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 173
AG+ NIEV + DNSI P+D H +KSALE V+TVLHAGGKF S Y
Sbjct: 57 MAGFCKNIEVIINEDNSITVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--Y 114
Query: 174 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 233
VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP+ + V + +R+GT
Sbjct: 115 KVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGTTERRGT 170
Query: 234 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-G 292
R +FWPD +FTT ++ + IA R+RELA+LN + I L+ D E E F A
Sbjct: 171 RQQFWPDATIFTTT-KYKWDIIANRMRELAYLNAGIKITLKDMRPDEEGKLREETFHAED 229
Query: 293 GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
GL+E+V++++ + L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GG
Sbjct: 230 GLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAVMYNND-YSENIHSYVNNINTIEGG 288
Query: 352 THIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 407
TH+ G + +LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQ
Sbjct: 289 THLTGFRMALTRTLKTYADADPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQ 348
Query: 408 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK 467
TKT+LGN EV V Q+V E L+ YLE HP I K + A A +AA++AR+ V++K
Sbjct: 349 TKTKLGNSEVSGAVQQAVGEALSNYLEEHPKEAKLICDKVVLAATARIAARKARESVQRK 408
Query: 468 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVER 527
+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR QAILPL+GKILNVE+
Sbjct: 409 NVMSGGGLPGKLADCSNRDPKKCEIFLVEGDSAGGSAKQGRDRYTQAILPLKGKILNVEK 468
Query: 528 KDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKIIILTDADVDGAHIRTLL 582
+++ E + N+I+++G+ GV+GE K+ + LRY KIII+TDADVDG+HI TL+
Sbjct: 469 VQWHKVFEAESVMNIIQSIGVRFGVEGEGDKEANIDKLRYDKIIIMTDADVDGSHIDTLI 528
Query: 583 LTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAE----LKKVKSSFPSNALY 637
+T FYR+ + EG +Y+ PPLY + K +YCY + + L K
Sbjct: 529 MTLFYRFMPRVIQEGHLYIATPPLYLCTYKNKVKEYCYTEQQRQAFLDKYGDGVEDGKSI 588
Query: 638 SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQN 697
QR+KGLGEM P QLWETT++P R+LKQ+ IE+AA+A+ +FS LMG V+ R+E I+
Sbjct: 589 HTQRYKGLGEMNPEQLWETTMDPNTRLLKQVNIENAAKADEIFSMLMGDDVEPRREFIEQ 648
Query: 698 AANLVNLD 705
A N+D
Sbjct: 649 NATYANID 656
>gi|448369896|ref|ZP_21556349.1| DNA gyrase subunit B [Natrialba aegyptia DSM 13077]
gi|445650336|gb|ELZ03260.1| DNA gyrase subunit B [Natrialba aegyptia DSM 13077]
Length = 644
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/637 (48%), Positives = 429/637 (67%), Gaps = 21/637 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDEITVTIHE 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 246
NALS LE V RDG Y + G+P + V ++ + GT IRFWPD +F TT
Sbjct: 125 NALSARLETEVKRDGGVYEHTFETGEPAGDME-RVRDMEPGEATGTTIRFWPDTDIFETT 183
Query: 247 AIQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 303
+ F +T++ R+RELAFLN + I LR +E + + ++ E Y + GG+ E+V++LN
Sbjct: 184 DMAF--STLSNRLRELAFLNSGVRITLRDERESATEDGDELAETYEYQGGIREFVEYLNE 241
Query: 304 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 362
+ +H DV+ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LT
Sbjct: 242 TRSAMHEDVIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALT 300
Query: 363 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 422
R +N ++ + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+
Sbjct: 301 RVVNDYANENDLLSDIEENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVE 360
Query: 423 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 482
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 GAMHDGLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADC 420
Query: 483 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 542
+ PE++E+FI EGDSAGGSAKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+
Sbjct: 421 QTKDPEKAELFIAEGDSAGGSAKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNM 480
Query: 543 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 602
I +G G+ G++F + +RY KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y
Sbjct: 481 ITGIGAGI-GDEFNVDDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYAT 539
Query: 603 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 662
PPLY++ + DAE ++ + +QRFKGLGEM P QLWETT+NP+
Sbjct: 540 QPPLYRIRYRGETYDAMTDAERDEIVEEKCNGNPSQVQRFKGLGEMNPEQLWETTMNPDN 599
Query: 663 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
R+LKQ+ IEDAA A+ +FS LMG V+ RK+ I+ A
Sbjct: 600 RILKQITIEDAAAADKMFSVLMGDAVEPRKQFIKENA 636
>gi|440682268|ref|YP_007157063.1| transcriptional regulator, XRE family [Anabaena cylindrica PCC
7122]
gi|428679387|gb|AFZ58153.1| transcriptional regulator, XRE family [Anabaena cylindrica PCC
7122]
Length = 1197
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/512 (59%), Positives = 394/512 (76%), Gaps = 18/512 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 183
+ AD S IP+D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 184 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 243
+SVVNALSE +EVTVWRD E+ Q+Y R PVT L V P + R GT I F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDNKEHLQRYERSFPVTEL--QVKPY-KEARTGTSITFKPDTQI 175
Query: 244 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 300
FTT+I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVKIIFTDHRLELLKSDTPKIEVYEYKGGIKEYIAY 235
Query: 301 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 359
+N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 360 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 419
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKEHESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 420 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 479
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSFVGEVLTEYLEFHPAIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 480 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 539
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EI
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEI 475
Query: 540 QNLIRALGLGVKGEDFKKEALRYHKIIILTDA 571
Q LI ALGLGVKG++F LRYH+I+I++ A
Sbjct: 476 QALITALGLGVKGDEFDASQLRYHRIVIMSVA 507
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
Query: 569 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QVQYCYDDAELKKV 627
TDADVDGAHIRTLLLTFFYRYQ+ L + G IY+ PPLYK+ERG+ + +YCY D EL++
Sbjct: 1056 TDADVDGAHIRTLLLTFFYRYQRALIENGFIYIACPPLYKLERGRSEPRYCYSDRELQQH 1115
Query: 628 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 687
++FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R LKQ+ IEDAAEA+ +F+ LMG R
Sbjct: 1116 IATFPANANYNIQRFKGLGEMMPQQLWETTMNPESRTLKQVEIEDAAEADRIFTILMGDR 1175
Query: 688 VDTRKELIQNAANLVNLDHLDI 709
V R+E I+ + +NL LDI
Sbjct: 1176 VAPRREFIETYGSKLNLTDLDI 1197
>gi|326335208|ref|ZP_08201404.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692616|gb|EGD34559.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 656
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/653 (46%), Positives = 435/653 (66%), Gaps = 31/653 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE+LDN++DEA AGY I V +
Sbjct: 10 YSADNIQSLEGMEHVRVRPSMYIGDVGMRGLHHLVYEVLDNSIDEALAGYCDTISVFINP 69
Query: 137 DNSI---------PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
DNSI P+D+H SALE V+T + AGGKF S Y VSGGLHGVG+SVV
Sbjct: 70 DNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKGS--YKVSGGLHGVGVSVV 127
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALS L TV+RDG E+ Q+Y RG + + V + +++GT++ F PD ++F +
Sbjct: 128 NALSTHLTATVYRDGKEWQQEYERGVALYS----VKEIGETNKRGTKVTFLPDTEIFQQS 183
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 305
I+F ++ +A RIRELAFLN + I L +E D K E++ GL E++Q+L+ ++
Sbjct: 184 IEFSYDILASRIRELAFLNKGIRITLTDLREKDDQGKPLSQEFYSEKGLVEFIQYLDGNR 243
Query: 306 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 364
P+ ++ + + I +++A+ + +D++++ + Y N+I T +GGTH++G + LTRT
Sbjct: 244 PPIISKIISMEGEKNEIPVEVAMVY-NDSFNENLHSYVNNINTHEGGTHLQGFRMGLTRT 302
Query: 365 LNSLGKKS----KTVKDKD--ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
L + KS K KDK + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV
Sbjct: 303 LKNYADKSGLLEKASKDKKNPLEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVT 362
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
V Q+V E L YLE +P+ +I++K + A +A LAAK+AR+ V++KS + + LPGK
Sbjct: 363 AAVSQAVSEMLESYLEENPEDAKTIVNKVILAAQARLAAKKAREAVQRKSPMGGAGLPGK 422
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADC PE E+F+VEGDSAGG+AKQGRD++FQAILPLRGKILNVE+ + + +EE
Sbjct: 423 LADCQDKNPENCELFLVEGDSAGGTAKQGRDQKFQAILPLRGKILNVEKAMQHRVLDSEE 482
Query: 539 IQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 594
I+N+ ALG+ + ++ K LRY+KIII+ DADVDG+HI TL+LTFF+RY + L
Sbjct: 483 IRNIYTALGVTIGTDEDSKALNMSKLRYYKIIIMCDADVDGSHIATLILTFFFRYMRELI 542
Query: 595 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL--YSIQRFKGLGEMMPVQ 652
+EG IY+ PPLY +++GK+ QY + D E + + F S A ++QR+KGLGEM Q
Sbjct: 543 EEGHIYIATPPLYLLKQGKKEQYAWSDEERDAITNEFYSQAQAKVAVQRYKGLGEMNATQ 602
Query: 653 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
L +TT++P+ R L+++ IE+A EA+ +FS LMG V R+E I+ A N+D
Sbjct: 603 LADTTMDPKHRTLRKVTIENAVEADRIFSMLMGDDVPPRREFIEKNARYANID 655
>gi|237733416|ref|ZP_04563897.1| DNA gyrase subunit B gyrB [Mollicutes bacterium D7]
gi|229383451|gb|EEO33542.1| DNA gyrase subunit B gyrB [Coprobacillus sp. D7]
Length = 641
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/648 (49%), Positives = 435/648 (67%), Gaps = 22/648 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +Y IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AGYAS+
Sbjct: 3 EEKVEHSYDESDIQVLEGLEAVRKRPGMYIGTTSIRGLHHLVWEIVDNSIDEALAGYASH 62
Query: 130 IEVAL---------LADNSIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 180
I V L +P H T S +ET+ TVLHAGGKFGG S LH
Sbjct: 63 IRVILKDDDVVQVIDDGRGMPTGTHAKTGISTVETIFTVLHAGGKFGGGGYKVSGG--LH 120
Query: 181 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWP 239
GVG SVVNALSE LEV V RDG EY+Q++ G KP L + D GT + F
Sbjct: 121 GVGASVVNALSEWLEVNVHRDGHEYYQRFENGGKPAGELKI----IGDSDITGTIVTFKA 176
Query: 240 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 299
DK +F +D++T+ RIRELAFLN L ++L ED ++ +EY++ GG++EYV
Sbjct: 177 DKIIFKEGTVYDYDTLRQRIRELAFLNKGLRLSL--EDQRNGVDRKHEYYYEGGIKEYVA 234
Query: 300 WLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 358
++N +K P+H+ + + +D+ ITI++ +Q+ +D Y + + N+I T +GGTH EG +
Sbjct: 235 YINKNKTPIHEEIIYVEDMQQEITIEVGMQY-NDGYQSNIYSFCNNINTHEGGTHEEGFR 293
Query: 359 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 418
+LTR +N+ K +K + +LSG+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 294 LALTRVINNYAKSKGLLKKDEEALSGDDVREGLTAIISVKHPDPQYEGQTKTKLGNAEVR 353
Query: 419 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 478
K+ + L ++L +PD I+ K++ A +A +AAK+AR++ R+K+VL S+LPGK
Sbjct: 354 KIASNIISASLDKFLLENPDTAKIIVDKAIVAARARMAAKKAREMTRRKNVLEVSNLPGK 413
Query: 479 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 538
LADCSS E EIFIVEG+SAGGSAK GRDRR QAILPLRGKILNVE+ + N E
Sbjct: 414 LADCSSKDASECEIFIVEGNSAGGSAKMGRDRRIQAILPLRGKILNVEKSRLEKILGNAE 473
Query: 539 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 598
I+++I A G G+ GE+F + LRYHKI+I+TDADVDG HIR L+LTF YRY + L + G
Sbjct: 474 IRSMITAFGTGI-GEEFNLDKLRYHKIVIMTDADVDGGHIRILMLTFLYRYLRPLVEGGF 532
Query: 599 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 658
+Y PPLY ++ GK YCY D EL +K+ A YSIQR+KGLGEM QLWETT+
Sbjct: 533 VYAAQPPLYLLKHGKDEYYCYSDEELDDLKTKIGEGAKYSIQRYKGLGEMNAEQLWETTM 592
Query: 659 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 705
+PE+R+L Q+ +++A EA+++F LMG +V+ R+E IQ NA + +LD
Sbjct: 593 DPEKRILNQIDLDEAMEADMIFDMLMGEKVEPRREFIQENAKYVTDLD 640
>gi|448502584|ref|ZP_21612697.1| DNA gyrase subunit B [Halorubrum coriense DSM 10284]
gi|445694079|gb|ELZ46214.1| DNA gyrase subunit B [Halorubrum coriense DSM 10284]
Length = 638
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/633 (49%), Positives = 429/633 (67%), Gaps = 19/633 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCEEIEVRIHD 66
Query: 137 DNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 187
D S IP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVSDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 188 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 247
NALSE LEV V RDG + +++RG+P V + GT IRFWPD+++F T
Sbjct: 125 NALSERLEVEVTRDGGVFRHRFARGEPAEDGFERVRDAGPDESTGTEIRFWPDEEIFETT 184
Query: 248 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 307
F +T+A R+RELAFLN + I L + D + + + GG+ E+V++LN + P
Sbjct: 185 -DFQTSTLANRLRELAFLNSGVEIRLVDDRDDTAET----FRYDGGIREFVEYLNETRSP 239
Query: 308 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 366
+H DV+ F + DG+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEDVIYFEGESDGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 367 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 426
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 427 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 486
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 487 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 546
PEE+E+F+VEGDSAGGSAKQGR+R QAILPL+GKILNVE+ + +N+EI+ LI A+
Sbjct: 419 PEEAELFVVEGDSAGGSAKQGRNRENQAILPLKGKILNVEKHRLDRILENDEIRALITAI 478
Query: 547 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 606
G G+ GE+F + +RY+KII++TDADVDGAHIRTLLLT YR+ K L + G +Y PPL
Sbjct: 479 GAGI-GEEFDIDDVRYNKIILMTDADVDGAHIRTLLLTLLYRHMKPLLEAGYVYAAQPPL 537
Query: 607 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 666
Y+V + +AE ++ +QRFKGLGEM P QLW+TT++PE R LK
Sbjct: 538 YRVRYRGETYDAMTEAERDRIVEEECDGNPTQVQRFKGLGEMNPEQLWDTTMDPENRRLK 597
Query: 667 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 699
++ ++DAA A+ +F+ LMG V+ RK+ I+ A
Sbjct: 598 RINVDDAAAADRMFNVLMGDAVEPRKQFIKEHA 630
>gi|408491756|ref|YP_006868125.1| DNA gyrase subunit B GyrB [Psychroflexus torquis ATCC 700755]
gi|408469031|gb|AFU69375.1| DNA gyrase subunit B GyrB [Psychroflexus torquis ATCC 700755]
Length = 646
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 296/658 (44%), Positives = 438/658 (66%), Gaps = 31/658 (4%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E K+N Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA
Sbjct: 2 SEEVKKN----NYSADSIQALEGMEHVRMRPSMYIGDVGERGLHHLVYEVVDNSIDEAMG 57
Query: 125 GYASNIEVALLADNS---------IPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 175
GY I++ + D S IPIDLH SALE V+T + AGGKF S Y V
Sbjct: 58 GYCDKIDLVINEDGSVTTLDNGRGIPIDLHKKEGVSALEVVMTKIGAGGKFDKDS--YKV 115
Query: 176 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 235
SGGLHGVG+SVVNALS L V++DG + Q+Y RGK + V P + +GT I
Sbjct: 116 SGGLHGVGVSVVNALSVKLHARVFKDGKVWEQEYERGKAIYP----VKPTGDTEHKGTEI 171
Query: 236 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAG 292
F PD ++F +++F + T+A R+REL++LN + I++ R+ + D E Q +E++
Sbjct: 172 TFKPDSEIFQESVEFKYETLAKRLRELSYLNKGIRISIIDKRQTNDDGEYRQ-DEFYSEE 230
Query: 293 GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 351
GL+E++++++ +++P+ DV+ + + I +++A+ + +++YS+ + Y N+I T +GG
Sbjct: 231 GLKEFIRFIDQNREPIITDVISMESEKNNIPVEVAMVY-NNSYSENLHSYVNNINTHEGG 289
Query: 352 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 411
TH+ G + LT TL S + ++G+ REGLT I+SV+V NP+FEGQTKT+
Sbjct: 290 THLSGFRRGLTATLKKYADNSGLLDKLKFEITGDDFREGLTAIVSVKVANPQFEGQTKTK 349
Query: 412 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 471
LGN E+ V Q+V E L YLE +P+ +I+ K + A +A AAK+AR++V++K+V+
Sbjct: 350 LGNRELTSAVSQAVTEMLEIYLEENPNDAKTIVQKVMLAAQARHAAKKAREMVQRKTVMS 409
Query: 472 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA 531
LPGKL+DCS PE E+F+VEGDSAGG+AKQGRDR+FQAILPLRGKILNVE+ +
Sbjct: 410 GGGLPGKLSDCSEQDPEACEVFLVEGDSAGGTAKQGRDRKFQAILPLRGKILNVEKAMQH 469
Query: 532 AMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIIILTDADVDGAHIRTLLLTFFY 587
+++NEEI+N+ ALG+ + E+ K LRYHK+II+ DADVDG+HI TL+LTFF+
Sbjct: 470 RVFENEEIKNIYTALGVTIGTEEDSKALNLSKLRYHKVIIMCDADVDGSHIATLILTFFF 529
Query: 588 RYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGE 647
RY K L + IY+ PPLY +++G + +Y +++ E ++ + + ++ S+QR+KGLGE
Sbjct: 530 RYMKELIEASHIYIATPPLYLIKKGSKKRYAWNEKERNEIVNEYKTSV--SVQRYKGLGE 587
Query: 648 MMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 705
M +QLW+TT+NPE R+L+++ I D AEA+ +FS LMG V R+E I+ A N+D
Sbjct: 588 MNAIQLWDTTMNPENRILRRVTIVDMAEADRIFSMLMGDEVPPRREFIEQNAVYANID 645
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,567,453,683
Number of Sequences: 23463169
Number of extensions: 443175001
Number of successful extensions: 1326537
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17816
Number of HSP's successfully gapped in prelim test: 419
Number of HSP's that attempted gapping in prelim test: 1211859
Number of HSP's gapped (non-prelim): 22078
length of query: 709
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 559
effective length of database: 8,839,720,017
effective search space: 4941403489503
effective search space used: 4941403489503
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)