BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005202
(709 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%)
Query: 169 LPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATL 228
+P LL LD LQ+KD +F+EPV+ E+PDY E I PMDF T+R KL + Y TL
Sbjct: 592 MPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTL 651
Query: 229 EQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDD 276
E+FE+D LI +N M+YNA DTI+ R A + +L + R+ +++
Sbjct: 652 EEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAEN 699
>sp|Q3UQU0|BRD9_MOUSE Bromodomain-containing protein 9 OS=Mus musculus GN=Brd9 PE=2 SV=1
Length = 596
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 166 STPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAY 225
STP+ ++LL L +LQ+KD +G F+ PV P Y +I+HPMDFGT+++K+ Y
Sbjct: 138 STPI--QRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEY 195
Query: 226 ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 259
++ +F+ D L+C NAM YN PDT+Y++ A+ I
Sbjct: 196 KSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
>sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9 OS=Homo sapiens GN=BRD9 PE=1 SV=2
Length = 597
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 166 STPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAY 225
STP+ ++LL L +LQ+KD +G F+ PV P Y +I+HPMDFGT+++K+ Y
Sbjct: 138 STPI--QQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEY 195
Query: 226 ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 259
++ +F+ D L+C NAM YN PDT+Y++ A+ I
Sbjct: 196 KSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
>sp|Q7ZUF2|BRD9_DANRE Bromodomain-containing protein 9 OS=Danio rerio GN=brd9 PE=2 SV=1
Length = 631
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 12/143 (8%)
Query: 170 PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLE 229
P ++LL L LQ+KD +G F+ PV P Y +I+HPMDF T+++K+A Y T+
Sbjct: 170 PHQQLLEHFLRLLQRKDAHGFFAFPVTDAIAPGYSMIIKHPMDFSTMKDKIAANEYKTIT 229
Query: 230 QFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDS-----DDNEPETKVV 284
+F+ D L+C NAM YN P+T+Y++ A+ +L F+ + + + DD PE V
Sbjct: 230 EFKADFKLMCDNAMVYNRPETVYYKAAK---KLLHTGFKMMSKQAAILGDDDIAPEEPVT 286
Query: 285 R----RGRPPTKNFKKPLGRPSL 303
P K+ K+P+ P +
Sbjct: 287 EMMPIHTEYPKKSKKQPVKEPII 309
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%)
Query: 170 PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLE 229
P LL +LD+LQ KD +F++PV +E+PDY + I+HPMDF T+R +L Y L
Sbjct: 566 PLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLH 625
Query: 230 QFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSD 275
+FE+D LI N M+YNA DT+++R A + + R++ D
Sbjct: 626 EFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVD 671
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 174 LLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEK 233
LL L++LQ+KDT +FSEPV E+PDY + I+ PMDF T++ L Y + FE+
Sbjct: 636 LLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEE 695
Query: 234 DVFLICSNAMQYNAPDTIYFRQARSIHE 261
D LI SN ++YNA DTI++R A + E
Sbjct: 696 DFNLIVSNCLKYNAKDTIFYRAAVRLRE 723
>sp|Q6NVM8|BRD9_XENTR Bromodomain-containing protein 9 OS=Xenopus tropicalis GN=brd9 PE=2
SV=1
Length = 596
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 166 STPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAY 225
STPL ++LL + L +LQ+KD G F+ PV + P Y +I++PMDF T++ K++ Y
Sbjct: 150 STPL--QQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQNEY 207
Query: 226 ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 259
++ +F+ D L+C NAM YN P+T+Y++ A+ +
Sbjct: 208 KSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKL 241
>sp|Q6GLP7|BRD9_XENLA Bromodomain-containing protein 9 OS=Xenopus laevis GN=brd9 PE=2
SV=1
Length = 527
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 166 STPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAY 225
STPL ++LL + L +LQ+KD G F+ PV + P Y +I++PMDF T++ K++ Y
Sbjct: 80 STPL--QQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQDEY 137
Query: 226 ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 259
++ +F+ D L+C NAM YN P+T+Y++ A+ +
Sbjct: 138 KSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKL 171
>sp|Q5ZKG2|BRD7_CHICK Bromodomain-containing protein 7 OS=Gallus gallus GN=BRD7 PE=2 SV=1
Length = 651
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 18/131 (13%)
Query: 160 QLELGPSTPL-------------PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEV 206
+LEL P PL P ++ L ++ +LQ+KD FS PV P Y +
Sbjct: 112 RLELSPEKPLTSSLSKQEEVEQTPLQEALNQLMRQLQRKDPSSFFSFPVTDFIAPGYSMI 171
Query: 207 IEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE----- 261
I++PMDF T++ K+ N Y ++E+ + + L+C+NAM YN PDTIY++ A+ +
Sbjct: 172 IKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMTYNKPDTIYYKAAKKLLHSGMKI 231
Query: 262 LAKKNFENLRQ 272
L+++ ++L+Q
Sbjct: 232 LSQERIQSLKQ 242
>sp|O88665|BRD7_MOUSE Bromodomain-containing protein 7 OS=Mus musculus GN=Brd7 PE=1 SV=1
Length = 651
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 167 TPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYA 226
TPL ++ L ++ +LQ+KD FS PV P Y +I+HPMDF T++ K+ N Y
Sbjct: 134 TPL--QEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQ 191
Query: 227 TLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE-----LAKKNFENLRQDSD 275
++E+ + + L+C+NAM YN P+TIY++ A+ + L+++ ++L+Q D
Sbjct: 192 SIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|Q5R8B0|BRD7_PONAB Bromodomain-containing protein 7 OS=Pongo abelii GN=BRD7 PE=2 SV=1
Length = 651
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 18/135 (13%)
Query: 159 AQLELGPSTPL-------------PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCE 205
+L+L P PL P ++ L ++ +LQ+KD FS PV P Y
Sbjct: 111 VRLDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSM 170
Query: 206 VIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE---- 261
+I+HPMDF T++ K+ N Y ++E+ + + L+C+NAM YN P+TIY++ A+ +
Sbjct: 171 IIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMK 230
Query: 262 -LAKKNFENLRQDSD 275
L+++ ++L+Q D
Sbjct: 231 ILSQERIQSLKQSID 245
>sp|Q9NPI1|BRD7_HUMAN Bromodomain-containing protein 7 OS=Homo sapiens GN=BRD7 PE=1 SV=1
Length = 651
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 18/135 (13%)
Query: 159 AQLELGPSTPL-------------PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCE 205
+L+L P PL P ++ L ++ +LQ+KD FS PV P Y
Sbjct: 111 VRLDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSM 170
Query: 206 VIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE---- 261
+I+HPMDF T++ K+ N Y ++E+ + + L+C+NAM YN P+TIY++ A+ +
Sbjct: 171 IIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMK 230
Query: 262 -LAKKNFENLRQDSD 275
L+++ ++L+Q D
Sbjct: 231 ILSQERIQSLKQSID 245
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 172 KKLLLFILD---RLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATL 228
++L LF+ D RL + +FS+PVD EE+ DY EVI+ PMD TV K+ Y T
Sbjct: 961 RELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTA 1020
Query: 229 EQFEKDVFLICSNAMQYNAPD 249
+ F KD+ LICSNA++YN PD
Sbjct: 1021 KDFLKDIDLICSNALEYN-PD 1040
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 178 ILDRLQKKDTYGVFSEPVDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV 235
+++ + KK T F PVDP E +PDY +VI+HPMD GT++ KL N Y+T++ F DV
Sbjct: 528 LINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADV 587
Query: 236 FLICSNAMQYNAPDTIYFRQARSI 259
L+ NA+ YNA + ++ A+++
Sbjct: 588 RLMFENALTYNADSSPVWKHAKTL 611
>sp|Q93YS6|GTE9_ARATH Transcription factor GTE9 OS=Arabidopsis thaliana GN=GTE9 PE=1 SV=1
Length = 688
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 167 TPLPDKKLLLF-----ILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNK 219
TP+ +LL +L RL VF+ PVD +L DY VIEHPMD GTV+NK
Sbjct: 128 TPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNK 187
Query: 220 LANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQ 272
L +G Y+ +F DV L SNAM YN P + A ++ + + ++ L +
Sbjct: 188 LTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEK 240
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 237
+ RL + VF++PVDP+E+PDY VI+ PMD +V +K+ Y T++ + KD+ L
Sbjct: 645 VTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDL 704
Query: 238 ICSNAMQYNAPD 249
ICSNA++YN PD
Sbjct: 705 ICSNALEYN-PD 715
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 172 KKLLLF---ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATL 228
++L +F + RL + VF++PVDP+E+PDY VI+ PMD +V +K+ Y T+
Sbjct: 987 RELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTV 1046
Query: 229 EQFEKDVFLICSNAMQYNAPD 249
+ + +D+ LICSNA++YN PD
Sbjct: 1047 KDYLRDIDLICSNALEYN-PD 1066
>sp|Q5RDX4|ATAD2_PONAB ATPase family AAA domain-containing protein 2 OS=Pongo abelii
GN=ATAD2 PE=2 SV=1
Length = 1091
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 237
+ RL + VF++PVDP+E+PDY VI+ PMD +V +K+ Y T++ + +D+ L
Sbjct: 827 VTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDL 886
Query: 238 ICSNAMQYNAPD 249
ICSNA++YN PD
Sbjct: 887 ICSNALEYN-PD 897
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV 235
+L RL + +F+ PVD +L PDY +I+HPMD GTV++KL +G Y++ +F DV
Sbjct: 136 LLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADV 195
Query: 236 FLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDS 274
L NAM YN D +R A ++ + + ++ + + S
Sbjct: 196 RLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKS 234
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 168 PLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYAT 227
P P +L + +Q + F +PV E++PDY EVIEHPMD T+ +L N Y +
Sbjct: 345 PKPFFAVLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYES 404
Query: 228 LEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKK 265
+E+F +D I N YN +T Y++ A + + +K
Sbjct: 405 VEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQK 442
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 191 FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVD E L DYC++I+HPMD T+++KL + Y ++F DV L+ SN +YN P
Sbjct: 377 FYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPP 436
Query: 249 DTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 297
D AR + ++ + F + +EPE VV PPTK P
Sbjct: 437 DHEVVAMARKLQDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 174 LLLFILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQF 231
LL +L L K F +PVD +L PDY ++I+ PMD GT++ +L N Y ++
Sbjct: 66 LLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQEC 125
Query: 232 EKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVR---RGR 288
+D + +N YN P A ++ +L + L + E E +V+ RGR
Sbjct: 126 IQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTE----ETEIMIVQAKGRGR 181
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 191 FSEPVDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVDP + PDY +VI+ PMD T+++KL Y+TLE+FE D+ L+ +N YN P
Sbjct: 279 FYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPP 338
Query: 249 DTIYFRQARSIHELAKKNFE 268
T R + + K+ +E
Sbjct: 339 GTPVHVMGRQLENVFKEKWE 358
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 164 GPSTPLPDKKLLLFILDRLQKKDTYGVFSEPVDP--EELPDYCEVIEHPMDFGTVRNKLA 221
G P P +K L I+ +L++ F PVDP + +PDY ++++PMD GT+ KL
Sbjct: 82 GSGMPPPQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLT 141
Query: 222 NGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPET 281
+ Y+ ++F D+ L+ SN YN ++ +++ E+ ++ L+Q D +P
Sbjct: 142 SYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFER---QLKQLPDAEQPAA 198
Query: 282 KVVRRGR 288
V++ +
Sbjct: 199 APVKKSK 205
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 190 VFSEPVDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNA 247
+F EPVDP E+PDY VI+ PMD GTV++KL Y+ ++F DV L +NAM YN
Sbjct: 88 LFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNP 147
Query: 248 PDTIYFRQARSIHELAKKNFENL 270
A+ I+E+ + +E+L
Sbjct: 148 LWNEVHTIAKEINEIFEVRWESL 170
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 191 FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVD E L DYC++I+HPMD T+++KL Y ++F DV L+ SN +YN P
Sbjct: 376 FYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPP 435
Query: 249 DTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 297
D AR + ++ + F + +EPE VV PPTK P
Sbjct: 436 DHEVVAMARKLQDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 174 LLLFILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQF 231
LL +L L K F +PVD +L PDY ++I+ PMD GT++ +L N Y ++
Sbjct: 66 LLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQEC 125
Query: 232 EKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVR---RGR 288
+D + +N YN P A ++ +L + L + E E +V+ RGR
Sbjct: 126 IQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTE----ETEIMIVQAKGRGR 181
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 146 TISGANPTNNNQGAQLELGPSTPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCE 205
T S +P + + +G + PD IL L+ + F EPV+P +P Y +
Sbjct: 1565 TASQFSPGESPASKKRRMGTRSQSPDLTFCEIILMELESHEDAWPFLEPVNPRLVPGYRK 1624
Query: 206 VIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 246
+I++PMDF T+R+KL NG Y+ E+F +D LI SN +N
Sbjct: 1625 IIKNPMDFSTMRHKLLNGNYSRCEEFAEDAELIFSNCQLFN 1665
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 237
IL LQ F PV+ EE+PDY E I+ PMD T+ KL N Y +E+F D L
Sbjct: 446 ILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARL 505
Query: 238 ICSNAMQYNAPDTIYFRQARSIHEL 262
+C+N YN +T Y++ A + +
Sbjct: 506 VCNNCRLYNGENTSYYKYANRLEKF 530
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV 235
+L+RL + F PVDP L PDY VI+HPMD GT+R++L G Y++ F DV
Sbjct: 168 LLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADV 227
Query: 236 FLICSNAMQYNAPDTIYFRQARSI 259
L SN++ YN P + A+ I
Sbjct: 228 RLTFSNSIAYNPPGNQFHTMAQGI 251
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 170 PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLE 229
P ++ +L L + FS PV+ EE+ DY +VI+ PMD T+ +KL N Y + +
Sbjct: 346 PHYNFMVTLLSELTNHPSAWPFSTPVNKEEVGDYYDVIKEPMDLSTMESKLENDKYDSFD 405
Query: 230 QFEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 262
QF D LI +N YNA T YF+ A + +
Sbjct: 406 QFLYDARLIFNNCRSYNADSTTYFKNATKLEKF 438
>sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2
Length = 813
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV 235
+L +L VF PVD +L PDY I+HPMD GTV+ LA+G Y++ +F DV
Sbjct: 183 LLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADV 242
Query: 236 FLICSNAMQYNAP 248
L +NAM YN P
Sbjct: 243 RLTFTNAMTYNPP 255
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 171 DKKLLLFILDRLQKKDTYGV-----FSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAY 225
D+ FILD + + V F PV+ + +PDY +VI +PMD T+R ++ Y
Sbjct: 1503 DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKY 1562
Query: 226 ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 259
+ E F DV LI +N+++YN P++ Y + A+ I
Sbjct: 1563 QSRESFLDDVNLILANSVKYNGPESQYTKTAQEI 1596
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 191 FSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 250
F PV+ + + DY ++I PMD T+R + Y + E+F + + LI N+ YN P
Sbjct: 1405 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1464
Query: 251 IYFRQARSIHELAKKNFENLRQDSD 275
+ ++S+ +L E L++ D
Sbjct: 1465 SLTQISQSMLDLCD---EKLKEKED 1486
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 191 FSEPVDPEELPDYCEVIEHPMDFGTVRNKL-ANGAYATLEQFEKDVFLICSNAMQYNAPD 249
F EPVD ++PDY ++I+ P+D T+ ++ + Y TLE F D+ + SNA YN+PD
Sbjct: 423 FKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPD 482
Query: 250 TIYFRQA 256
TIY++ A
Sbjct: 483 TIYYKCA 489
>sp|Q67W65|TAF1_ORYSJ Transcription initiation factor TFIID subunit 1 OS=Oryza sativa
subsp. japonica GN=TAF1 PE=2 SV=1
Length = 1810
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 152 PTNNNQGAQLELGPSTPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPM 211
P ++G ++EL +L I+D L+ +F +PV +E PDY ++IE PM
Sbjct: 1686 PAKRHRGGEVELS--------NILEKIVDHLRTMSCSFLFRKPVTKKEAPDYFDIIERPM 1737
Query: 212 DFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 246
D GT+R+K+ Y E F DV I NA YN
Sbjct: 1738 DLGTIRDKVRKMEYKNREDFRHDVAQIALNAHTYN 1772
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 171 DKKLLLFILDRLQKKDTYGV-----FSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAY 225
D+ FILD + + V F PV+ + +PDY +VI PMD T+R ++ Y
Sbjct: 1524 DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKY 1583
Query: 226 ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI----HELAKKNFENLRQ 272
+ E F DV LI +N+++YN P++ Y + A+ I H+ + E+L Q
Sbjct: 1584 QSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCHQTLTEYDEHLTQ 1634
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 191 FSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 250
F PV+ + + DY ++I PMD T+R + Y + E+F + + LI N+ YN P
Sbjct: 1426 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1485
Query: 251 IYFRQARSIHELAKKNFENLRQDSD 275
+ ++S+ +L E L++ D
Sbjct: 1486 SLTQISQSMLDLCD---EKLKEKED 1507
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 21/158 (13%)
Query: 102 LKLVLKYQISN----SNASDSDE-NAHKKRKINAIGGGSGSADCEKGEKTISGANPTNNN 156
LK + +N SN S++DE NA + SG G+K+I N +N
Sbjct: 1258 LKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNYVESN 1317
Query: 157 QGAQLELGPSTPLPDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTV 216
Q K+L+ I Q +D+ F +PVD E PDY ++I+ PMDFGTV
Sbjct: 1318 WKKQC----------KELVNLIF---QCEDSEP-FRQPVDLVEYPDYRDIIDTPMDFGTV 1363
Query: 217 RNKLANGAYATLEQFEKDVFLICSNAMQY--NAPDTIY 252
R L G Y + +F KD+ LI SNA Y N IY
Sbjct: 1364 RETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIY 1401
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 179 LDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 238
+D+L D F+ PVD P YC V+ +P D T+R +L N Y L +V I
Sbjct: 1173 IDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYI 1232
Query: 239 CSNAMQYNAPDTIYFRQARSIHELAKKNFEN 269
NA +N P+++ R A+ I + K +N
Sbjct: 1233 EHNARTFNEPESVIARSAKKITDQLLKFIKN 1263
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 172 KKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQF 231
K LL+ I Q +D+ F +PVD +E PDY ++I+ PMDFGTVR L G Y + +F
Sbjct: 1325 KALLILIF---QCEDSEP-FRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVEF 1380
Query: 232 EKDVFLICSNAMQY--NAPDTIY 252
KD+ LI SNA Y N IY
Sbjct: 1381 CKDIRLIFSNAKAYTPNKRSKIY 1403
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 179 LDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 238
+D+L D F+ PVD P YC V+ +P D T+R +L N Y L +V I
Sbjct: 1174 IDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALIWEVRYI 1233
Query: 239 CSNAMQYNAPDTIYFRQARSIHELAKKNFEN 269
NA +N P+++ R A+ I + K +N
Sbjct: 1234 EHNARTFNEPESVIARSAKKITDQLLKFIKN 1264
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 178 ILDRLQKKDTYGV---FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFE 232
IL L K G F +PVD E L DY ++I+ PMD GTV+ K+ N Y + +F
Sbjct: 487 ILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFA 546
Query: 233 KDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 270
DV LI +N +YN PD R + ++ + + N+
Sbjct: 547 ADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 174 LLLFILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQF 231
L+ ++ + K F +PVD ++L PDY ++I+ PMD GT++ +L N Y + ++
Sbjct: 42 LIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKET 101
Query: 232 EKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPET 281
+D + +N YN P A+++ ++ + E++ ++ + EP T
Sbjct: 102 IQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEELELEPVT 151
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 191 FSEPVDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVDP LP+Y +V+++PMD GT+ N L N Y T++QF D+ L+ N Q+N
Sbjct: 345 FLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFNP- 403
Query: 249 DTIYFRQARSIHELAKK-----NFENLRQDSDDNEPET 281
+ +H + KK NF L NE ET
Sbjct: 404 ------EGNEVHSMGKKLKELFNFHWLENQDILNEIET 435
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 191 FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVDP L P Y ++ PMD + KL Y ++EQ D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 249 DTIYFRQARSIHELAKK 265
++ A+ I + +K
Sbjct: 218 ESSISSMAKRIQKYFEK 234
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 13/113 (11%)
Query: 173 KLLLFILDRLQKK--DTYGV-FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYAT 227
K +L L KK + Y F +PV+P PDY +VI+HPMD GT++NKL + YA+
Sbjct: 395 KFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYAS 454
Query: 228 LEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPE 280
++ FE D+ L+ N ++N+ T +H + KK E++ Q N+P+
Sbjct: 455 MKAFEADMVLMFKNCYKFNSAGT-------PVHLMGKK-LESIFQKLWANKPD 499
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 191 FSEPVDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F PVDP + +PDY +I++P+D GT++ K ++G Y++ + F D+ L+ SN YN
Sbjct: 254 FRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGT 313
Query: 249 DT 250
++
Sbjct: 314 ES 315
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 173 KLLLFILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQ 230
K LL + ++L K + F PVD + L PDY E+I+ PMD TV KL G Y Q
Sbjct: 871 KFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQ 930
Query: 231 FEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 262
F D++L+ NA YN ++ ++ + E+
Sbjct: 931 FCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEM 962
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 237
+L LQ F +PV+ +E+PDY E I+ PMD T+ KL N Y +E F D L
Sbjct: 352 VLTELQNHAAAWPFLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIYDARL 411
Query: 238 ICSNAMQYNAPDTIYFRQARSIHEL 262
I +N YN +T YF+ A + +
Sbjct: 412 IFNNCRAYNGENTSYFKYANRLEKF 436
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 237
++ ++Q + F EPVDP+E PDY +VI+ PMD + KL + Y L +F D+
Sbjct: 2568 LIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTK 2627
Query: 238 ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDD 276
I N YN ++ +++ A ++ + +N R++ D
Sbjct: 2628 IFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRENVFD 2666
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 171 DKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQ 230
D IL ++ D F EPV+P + Y VI++PMDF T+R +L G Y + E+
Sbjct: 1782 DLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRVIKNPMDFSTMRERLLRGGYTSSEE 1841
Query: 231 FEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDN 277
F D L+ N +N D+ + + + +E Q N
Sbjct: 1842 FAADALLVFDNCQTFNEDDSEVGKAGHVMRRFFESRWEEFYQGKQAN 1888
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 191 FSEPVDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVD E EL DY ++I+HPMD TV+ K+ Y + F DV L+ SN +YN P
Sbjct: 334 FYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPP 393
Query: 249 DTIYFRQARSIHELAKKNFENL 270
D AR + ++ + F +
Sbjct: 394 DHEVVAMARKLQDVFEMRFAKM 415
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 177 FILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKD 234
++ L K F +PVD +L PDY ++I++PMD GT++ +L N Y + + +D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 235 VFLICSNAMQYNAP--DTIYFRQA 256
+ +N YN P D + QA
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQA 128
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 170 PDKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLE 229
P ++ +L LQ + F++ V+ +E+PDY EVI+ PMD T+ +L +Y T+E
Sbjct: 356 PHFAVMQHVLSELQNHASAWPFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADSYKTME 415
Query: 230 QFEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 262
+F D L+ +N YN T Y++ A + +
Sbjct: 416 EFVYDARLVFNNCRAYNNETTTYYKNANKLEKF 448
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 191 FSEPVDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 248
F +PVD E EL DY ++I+HPMD TV+ K+ + Y + F D+ L+ SN +YN P
Sbjct: 333 FYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPP 392
Query: 249 DTIYFRQARSIHELAKKNFENL 270
D AR + ++ + F +
Sbjct: 393 DHEVVAMARKLQDVFEMRFAKM 414
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 177 FILDRLQKKDTYGVFSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKD 234
++ L K F +PVD +L PDY ++I++PMD GT++ +L N Y + + +D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 235 VFLICSNAMQYNAP--DTIYFRQA 256
+ +N YN P D + QA
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQA 127
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 172 KKLLLFILDRLQKKDTYGV-FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATL 228
++ L+ L+ L ++D + F +PVDP+ L PDY +++++PMD T++ KL G Y
Sbjct: 1092 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1151
Query: 229 EQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSD 275
Q+ DV+L+ +NA YN R+ +++ K E Q+ D
Sbjct: 1152 WQYVDDVWLMFNNAWLYN-------RKTSRVYKFCSKLAEVFEQEID 1191
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 172 KKLLLFILDRLQKKDTYGV-FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATL 228
++ L+ L+ L ++D + F +PVDP+ L PDY +++++PMD T++ KL G Y
Sbjct: 1091 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1150
Query: 229 EQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSD 275
Q+ DV+L+ +NA YN R+ +++ K E Q+ D
Sbjct: 1151 WQYVDDVWLMFNNAWLYN-------RKTSRVYKFCSKLAEVFEQEID 1190
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 172 KKLLLFILDRLQKKDTYGV-FSEPVDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATL 228
++ L+ L+ L ++D + F +PVDP+ L PDY +++++PMD T++ KL G Y
Sbjct: 1092 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1151
Query: 229 EQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSD 275
Q+ DV+L+ +NA YN R+ +++ K E Q+ D
Sbjct: 1152 WQYVDDVWLMFNNAWLYN-------RKTSRVYKFCSKLAEVFEQEID 1191
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 171 DKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQ 230
D IL ++ D F EPV+P + Y +I++PMDF T+R +L G Y + E+
Sbjct: 1798 DLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEE 1857
Query: 231 FEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDN 277
F D L+ N +N D+ + + + +E Q N
Sbjct: 1858 FAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQAN 1904
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 178 ILDRLQKKDTYGVFSEPVDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 237
IL ++ K F EPV +E DY +VI HPMDF TV+NK + G+Y ++++F D+
Sbjct: 1351 ILHKIVKYRFSWPFREPVTRDEAEDYYDVITHPMDFQTVQNKCSCGSYRSVQEFLTDMKQ 1410
Query: 238 ICSNAMQYNA------------------------PDTIYFRQARSIHELAKKNFENLRQD 273
+ +NA YN P Y R+ R KK + L +D
Sbjct: 1411 VFTNAEVYNCRGSHVLSCMVKTEQCLVALLHKHLPGHPYVRRKR------KKFPDRLAED 1464
Query: 274 SDDNEPETKVVRRGR 288
D+EPE RGR
Sbjct: 1465 EGDSEPEAVGQSRGR 1479
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 285,371,336
Number of Sequences: 539616
Number of extensions: 13121474
Number of successful extensions: 63022
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 56853
Number of HSP's gapped (non-prelim): 4576
length of query: 709
length of database: 191,569,459
effective HSP length: 125
effective length of query: 584
effective length of database: 124,117,459
effective search space: 72484596056
effective search space used: 72484596056
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)