Your job contains 1 sequence.
>005208
MTDNRIGFSEPMRSVGQCGTVPASDLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFS
AKANEPEATFGRSKMSNIDLNNVYDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNK
SSPPQASANSDSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSP
TDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHS
VAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIE
GSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVA
EQEVCSEICMLESAIEAAEISDDFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHL
HPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHK
AVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC
RDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSE
SGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMR
SSLVYRPVMLSMVAIAAVCVCVALLFKSSPEVLYIFRPFRWELLKYGSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005208
(709 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041329 - symbol:SPL1 "squamosa promoter bindi... 1038 9.5e-163 2
TAIR|locus:2101402 - symbol:SPL12 "squamosa promoter-bind... 975 3.5e-98 1
TAIR|locus:2037355 - symbol:SPL14 "squamosa promoter bind... 475 6.0e-43 1
TAIR|locus:2011706 - symbol:AT1G76580 species:3702 "Arabi... 414 1.2e-35 1
>TAIR|locus:2041329 [details] [associations]
symbol:SPL1 "squamosa promoter binding protein-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0032880 "regulation of protein
localization" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
GO:GO:0003700 GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.1100.10
SUPFAM:SSF103612 eggNOG:NOG266915 HOGENOM:HOG000082688
ProtClustDB:CLSN2685028 EMBL:AJ011577 EMBL:AJ011628 EMBL:AJ011629
EMBL:AK230269 IPI:IPI00519879 PIR:T02179 PIR:T02180 PIR:T52601
PIR:T52602 RefSeq:NP_850468.1 UniGene:At.12581
ProteinModelPortal:Q9SMX9 SMR:Q9SMX9 STRING:Q9SMX9 PaxDb:Q9SMX9
PRIDE:Q9SMX9 EnsemblPlants:AT2G47070.1 GeneID:819321
KEGG:ath:AT2G47070 GeneFarm:4762 TAIR:At2g47070 InParanoid:Q9SMX9
OMA:RGNDAYL PhylomeDB:Q9SMX9 Genevestigator:Q9SMX9
GermOnline:AT2G47070 Uniprot:Q9SMX9
Length = 881
Score = 1038 (370.5 bits), Expect = 9.5e-163, Sum P(2) = 9.5e-163
Identities = 221/469 (47%), Positives = 288/469 (61%)
Query: 34 NDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVYDDSQERVEH 93
N A G QA + ++ F +R +A N E + KM++ DLN++Y DS +
Sbjct: 257 NSALLGIEQA--PQEELKQFSARQDGTATENRSEK---QVKMNDFDLNDIYIDSDDT--D 309
Query: 94 LELSHAPVNPGPVSLYSPLWLHPGSNKSSPPXXXXXXXXXXXXXXXXXXXXXXXRTDRIV 153
+E S P NP SL P W+H +SSPP RT RIV
Sbjct: 310 VERSPPPTNPATSSLDYPSWIH----QSSPPQTSRNSDSASDQSPSSSSEDAQMRTGRIV 365
Query: 154 FKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCXXX 213
FKLFGK+PN+FP+VLR QILDWLSHSPTD+ESYIRPGCIVLTIYLR + WEEL
Sbjct: 366 FKLFGKEPNEFPIVLRGQILDWLSHSPTDMESYIRPGCIVLTIYLRQAETAWEELSDDLG 425
Query: 214 XXXXXXXXXXXXXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAV 273
W TGW+Y RVQ+ +AF+YNGQVV+DT L LKS I S+KP+A+
Sbjct: 426 FSLGKLLDLSDDPLWTTGWIYVRVQNQLAFVYNGQVVVDTSLSLKSRDYSHIISVKPLAI 485
Query: 274 PVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADT-VNENDEL-QCLSFP 331
+E+ +F VKG NL + TRLLC++EG YL+QET +D D +N E+ +C++F
Sbjct: 486 AATEKAQFTVKGMNLRQRGTRLLCSVEGKYLIQETTHDSTTREDDDFKDNSEIVECVNFS 545
Query: 332 CSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQE-VCSEICMLESAIEAAEISDDFQKIAEK 390
C +P + GRGF+E+ED GLSSSF PF+V E + VCSEI +LE+ +E
Sbjct: 546 CDMPILSGRGFMEIEDQGLSSSFFPFLVVEDDDVCSEIRILETTLEFTG----------- 594
Query: 391 TEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWCAVVKK 450
T+ QA+DF+HE+GWLLHRS L G PN FP RF+WL+EFSM+ +WCAV++K
Sbjct: 595 TDSAKQAMDFIHEIGWLLHRSKL----GESDPNPGVFPLIRFQWLIEFSMDREWCAVIRK 650
Query: 451 LLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVELLLNYAP 498
LL + FDG V G+ +SS A L E+ LLH+AVR+N +PMVE+LL Y P
Sbjct: 651 LLNMFFDGAV--GEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIP 697
Score = 568 (205.0 bits), Expect = 9.5e-163, Sum P(2) = 9.5e-163
Identities = 124/248 (50%), Positives = 160/248 (64%)
Query: 463 GDHTSSELAIL-EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFI 521
G+ +SS A L E+ LLH+AVR+N +PMVE+LL Y P KQ + S +
Sbjct: 661 GEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIP-----------KQ---QRNS--L 704
Query: 522 FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 581
F+P+ GPAGLTPLH+AA +D +E+VLDALT+DP VGIEAWK+ +DSTG TP DYA LR
Sbjct: 705 FRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLR 764
Query: 582 AHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTK 641
H SYIHL+QRKINKKS+ V+++IP S D + K+ P G +S + +
Sbjct: 765 GHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKE-PKSGPMASAL----------E 813
Query: 642 VMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMXXXXXXXXXXXLLFKSSPEVLYIFRPFRW 701
+ Q C+LC+ K+ Y R S+ YRP MLSM LLFKS PEVLY+F+PFRW
Sbjct: 814 ITQIPCKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRW 873
Query: 702 ELLKYGSS 709
ELL YG+S
Sbjct: 874 ELLDYGTS 881
>TAIR|locus:2101402 [details] [associations]
symbol:SPL12 "squamosa promoter-binding protein-like 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 SMART:SM00248 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403 GO:GO:0003700
GO:GO:0006351 EMBL:AL138658 Gene3D:4.10.1100.10 SUPFAM:SSF103612
EMBL:AJ132096 EMBL:AJ132097 EMBL:BT003817 IPI:IPI00548047
PIR:T47827 RefSeq:NP_191562.1 UniGene:At.502 PDB:1WJ0 PDBsum:1WJ0
ProteinModelPortal:Q9S7P5 SMR:Q9S7P5 PRIDE:Q9S7P5
EnsemblPlants:AT3G60030.1 GeneID:825173 KEGG:ath:AT3G60030
GeneFarm:4773 TAIR:At3g60030 eggNOG:NOG266915 HOGENOM:HOG000082688
InParanoid:Q9S7P5 OMA:RWELLEY PhylomeDB:Q9S7P5
ProtClustDB:CLSN2685028 EvolutionaryTrace:Q9S7P5
Genevestigator:Q9S7P5 GermOnline:AT3G60030 Uniprot:Q9S7P5
Length = 927
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 211/458 (46%), Positives = 281/458 (61%)
Query: 49 SIEMFPSRSSFSAKANE---PEATFGRSKMSNIDLNNVYDDSQERVEHLELSHAPVNPGP 105
S+ P + ++ A E P+ + + K+++ DLN++Y DS + + S P NP
Sbjct: 302 SVSETPWQEVYANSAQERVAPDRSEKQVKVNDFDLNDIYIDSDDTTDIERSSPPPTNPAT 361
Query: 106 VSLYSPLWLHPGSNKSSPPXXXXXXXXXXXXXX-XXXXXXXXXRTDRIVFKLFGKDPNDF 164
SL H S +SSPP RTDRIVFKLFGK+PNDF
Sbjct: 362 SSLD----YHQDSRQSSPPQTSRRNSDSASDQSPSSSSGDAQSRTDRIVFKLFGKEPNDF 417
Query: 165 PLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCXXXXXXXXXXXXXX 224
P+ LR QIL+WL+H+PTD+ESYIRPGCIVLTIYLR + +WEELCC
Sbjct: 418 PVALRGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEASWEELCCDLSFSLRRLLDLSD 477
Query: 225 XXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVK 284
W GWLY RVQ+ +AF +NGQVVLDT L L+SH +I +++P+AV +++ +F VK
Sbjct: 478 DPLWTDGWLYLRVQNQLAFAFNGQVVLDTSLPLRSHDYSQIITVRPLAV--TKKAQFTVK 535
Query: 285 GFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIE 344
G NL R TRLLC +EG++LVQE M D + EN+E+ ++F C +P GRGF+E
Sbjct: 536 GINLRRPGTRLLCTVEGTHLVQEATQGGMEERDDLKENNEIDFVNFSCEMPIASGRGFME 595
Query: 345 VEDHG-LSSSFVPFIVAEQE-VCSEICMLESAIEAAEISDDFQKIAEKTEVKNQALDFLH 402
+ED G LSSSF PFIV+E E +CSEI LES +E T+ QA+DF+H
Sbjct: 596 IEDQGGLSSSFFPFIVSEDEDICSEIRRLESTLEFTG-----------TDSAMQAMDFIH 644
Query: 403 EMGWLLHRSHLKFRVGHL-HPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFD-GTV 460
E+GWLLHRS LK R+ H F RFK+L+EFSM+ +WC V+KKLL ILF+ GTV
Sbjct: 645 EIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFLIEFSMDREWCCVMKKLLNILFEEGTV 704
Query: 461 DTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP 498
D S + A+ E+ LLH+AVR+N +PMVE+LL ++P
Sbjct: 705 DP----SPDAALSELCLLHRAVRKNSKPMVEMLLRFSP 738
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 154/321 (47%), Positives = 208/321 (64%)
Query: 391 TEVKNQALDFLHEMGWLLHRSHLKFRVGHL-HPNFYFFPFKRFKWLLEFSMEHDWCAVVK 449
T+ QA+DF+HE+GWLLHRS LK R+ H F RFK+L+EFSM+ +WC V+K
Sbjct: 633 TDSAMQAMDFIHEIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFLIEFSMDREWCCVMK 692
Query: 450 KLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 509
KLL ILF+ T D S + A+ E+ LLH+AVR+N +PMVE+LL ++P ++
Sbjct: 693 KLLNILFEE--GTVD-PSPDAALSELCLLHRAVRKNSKPMVEMLLRFSP--------KKK 741
Query: 510 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS 569
Q + AG +F+P+ GP GLTPLH+AA +D +E+VLDALT+DPG GI+AWK+++D+
Sbjct: 742 NQTL--AG---LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDN 796
Query: 570 TGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSR 629
TG TP DYA LR H SYIHLVQRK+++K V+++IP S + + KQ+ SS
Sbjct: 797 TGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNIPESF-NIEHKQEKRSPMDSS- 854
Query: 630 VLSLQTEKITTKVMQQQCRLCEQK-VAYRNMRSSLVYRPVMLSMXXXXXXXXXXXLLFKS 688
SL+ +I QC+LC+ K V S+ YRP MLSM LLFKS
Sbjct: 855 --SLEITQIN------QCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKS 906
Query: 689 SPEVLYIFRPFRWELLKYGSS 709
PEVLY+F+PFRWELL+YG+S
Sbjct: 907 CPEVLYVFQPFRWELLEYGTS 927
>TAIR|locus:2037355 [details] [associations]
symbol:SPL14 "squamosa promoter binding protein-like 14"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110 PROSITE:PS50088
PROSITE:PS51141 SMART:SM00248 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0042742
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003700 GO:GO:0006351 EMBL:AC007369
Gene3D:4.10.1100.10 SUPFAM:SSF103612 eggNOG:NOG266915
HOGENOM:HOG000082688 EMBL:AJ242957 EMBL:AJ243094 EMBL:AY074499
IPI:IPI00520597 PIR:G86342 PIR:T52569 RefSeq:NP_173522.1
UniGene:At.21192 ProteinModelPortal:Q8RY95 SMR:Q8RY95
EnsemblPlants:AT1G20980.1 GeneID:838692 KEGG:ath:AT1G20980
GeneFarm:4776 TAIR:At1g20980 InParanoid:Q8RY95 OMA:VERDYCA
PhylomeDB:Q8RY95 ProtClustDB:CLSN2679456 Genevestigator:Q8RY95
GermOnline:AT1G20980 Uniprot:Q8RY95
Length = 1035
Score = 475 (172.3 bits), Expect = 6.0e-43, P = 6.0e-43
Identities = 126/379 (33%), Positives = 205/379 (54%)
Query: 258 KSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGAD 317
++ S + S+ P+AV E VV+G +L+ + C GSY+ E +
Sbjct: 612 RTWNSPELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVC--RQ 669
Query: 318 TVNENDELQCLSFPCSI--PNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICML--ES 373
T+ DEL SF P GR FIEVE+ SF P I+A +C E+ L E
Sbjct: 670 TIF--DELNVNSFKVQNVHPGFLGRCFIEVENGFRGDSF-PLIIANASICKELNRLGEEF 726
Query: 374 AIEAAEISDDFQKIAEKTEV-KNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRF 432
++ +++++ + + + + + L FL+E+GWL ++ + L F RF
Sbjct: 727 HPKSQDMTEEQAQSSNRGPTSREEVLCFLNELGWLFQKN----QTSELREQSDF-SLARF 781
Query: 433 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVE 491
K+LL S+E D+CA+++ LL +L + + + L +L E+ LL++AV+R MVE
Sbjct: 782 KFLLVCSVERDYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVE 841
Query: 492 LLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 551
LL++Y N L SR+ F+F PN+ GP G+TPLH+AAC +++++D L
Sbjct: 842 LLIHYLV-NPLTLSSSRK----------FVFLPNITGPGGITPLHLAACTSGSDDMIDLL 890
Query: 552 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGS 611
T+DP +G+ +W + +D+TG TP YA++R +H+Y LV RK+ K ++ +V L+I
Sbjct: 891 TNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNK--QVSLNIEHE 948
Query: 612 IVDWD--SKQKPLKGNKSS 628
+VD SK+ L+ NKSS
Sbjct: 949 VVDQTGLSKRLSLEMNKSS 967
Score = 432 (157.1 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 117/368 (31%), Positives = 184/368 (50%)
Query: 148 RTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEE 207
RT +IVFKL KDP+ P LR +I +WLS+ P+++ESYIRPGC+VL++Y+ + WE+
Sbjct: 504 RTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMSPAAWEQ 563
Query: 208 LCCXXXXXXXXXXXXXXXXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISS 267
L FWR +A NG+V ++ S + S
Sbjct: 564 LEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKSW--RTWNSPELIS 621
Query: 268 IKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQC 327
+ P+AV E VV+G +L+ + C GSY+ E + T+ DEL
Sbjct: 622 VSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVC--RQTIF--DELNV 677
Query: 328 LSFPCSI--PNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICML--ESAIEAAEISDD 383
SF P GR FIEVE+ SF P I+A +C E+ L E ++ +++++
Sbjct: 678 NSFKVQNVHPGFLGRCFIEVENGFRGDSF-PLIIANASICKELNRLGEEFHPKSQDMTEE 736
Query: 384 FQKIAEKTEV-KNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEH 442
+ + + + + L FL+E+GWL ++ + L F RFK+LL S+E
Sbjct: 737 QAQSSNRGPTSREEVLCFLNELGWLFQKN----QTSELREQSDF-SLARFKFLLVCSVER 791
Query: 443 DWCAVVKKLLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVELLLNYAPDNV 501
D+CA+++ LL +L + + + L +L E+ LL++AV+R MVELL++Y N
Sbjct: 792 DYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVELLIHYLV-NP 850
Query: 502 LDKPGSRQ 509
L SR+
Sbjct: 851 LTLSSSRK 858
>TAIR|locus:2011706 [details] [associations]
symbol:AT1G76580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683
GO:GO:0003700 GO:GO:0006351 EMBL:AC015450 Gene3D:4.10.1100.10
SUPFAM:SSF103612 HOGENOM:HOG000082688 UniGene:At.21192
ProtClustDB:CLSN2679456 EMBL:AY062670 EMBL:BT006626 EMBL:AJ630503
EMBL:AY568676 EMBL:AJ242958 IPI:IPI00531289 IPI:IPI00607526
PIR:H96793 PIR:T52568 RefSeq:NP_177784.6 UniGene:At.504
ProteinModelPortal:Q700C2 SMR:Q700C2 PaxDb:Q700C2 PRIDE:Q700C2
EnsemblPlants:AT1G76580.1 GeneID:843991 KEGG:ath:AT1G76580
GeneFarm:4778 TAIR:At1g76580 eggNOG:NOG128281 OMA:IANATIC
PhylomeDB:Q700C2 Genevestigator:Q700C2 GermOnline:AT1G76580
Uniprot:Q700C2
Length = 988
Score = 414 (150.8 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 107/354 (30%), Positives = 178/354 (50%)
Query: 148 RTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEE 207
RT +I FKLF KDP+ P LR +I WLS P+D+ES+IRPGC++L++Y+ + WE+
Sbjct: 469 RTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASAWEQ 528
Query: 208 LCCXXXXXXXXXXXXXXXXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISS 267
L FW +A +G++ L ++ + +
Sbjct: 529 L--EENLLQRVRSLVQDSEFWSNSRFLVNAGRQLASHKHGRIRLSKSW--RTLNLPELIT 584
Query: 268 IKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQC 327
+ P+AV E +V+G NL+ RL CA G+Y E + G + + DEL
Sbjct: 585 VSPLAVVAGEETALIVRGRNLTNDGMRLRCAHMGNYASME----VTGREHRLTKVDELNV 640
Query: 328 LSFPC-SIPNV-FGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDFQ 385
SF S +V GR FIE+E+ GL P I+A +C E+ LE ++ ++
Sbjct: 641 SSFQVQSASSVSLGRCFIELEN-GLRGDNFPLIIANATICKELNRLEEEFHPKDVIEEQI 699
Query: 386 KIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWC 445
+ ++ + + L FL+E+GWL R H P+F P RFK+LL S+E D+C
Sbjct: 700 QNLDRPRSREEVLCFLNELGWLFQRKWTSDI--HGEPDFSL-P--RFKFLLVCSVERDYC 754
Query: 446 AVVKKLLGILFDGTVDTGDHTSSE-LAIL-EMGLLHKAVRRNCRPMVELLLNYA 497
++++ +L ++ + + + E L +L ++ LL++A++R M E L++Y+
Sbjct: 755 SLIRTVLDMMVERNLGKDGLLNKESLDMLADIQLLNRAIKRRNTKMAETLIHYS 808
Score = 280 (103.6 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 64/188 (34%), Positives = 111/188 (59%)
Query: 427 FPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAIL-EMGLLHKAVRR 484
F RFK+LL S+E D+C++++ +L ++ + + + E L +L ++ LL++A++R
Sbjct: 736 FSLPRFKFLLVCSVERDYCSLIRTVLDMMVERNLGKDGLLNKESLDMLADIQLLNRAIKR 795
Query: 485 NCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA 544
M E L++Y+ + P +R FIF P++ GP +TPLH+AA +
Sbjct: 796 RNTKMAETLIHYSVN-----PSTRN----------FIFLPSIAGPGDITPLHLAASTSSS 840
Query: 545 ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRV 604
++++DALT+DP +G+ W + D+TG TP YA++R +HSY LV RK+ K +G++
Sbjct: 841 DDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADK--RNGQI 898
Query: 605 ILDIPGSI 612
L+I I
Sbjct: 899 SLNIENGI 906
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 709 659 0.00097 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 627 (67 KB)
Total size of DFA: 378 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.21u 0.79s 52.00t Elapsed: 00:00:03
Total cpu time: 51.21u 0.79s 52.00t Elapsed: 00:00:03
Start: Tue May 21 00:38:53 2013 End: Tue May 21 00:38:56 2013